Pregenerated sensors for PAPOLA-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000260806Ensembl transcript IDs: ENST00000569214.1
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGCACGCGTGGGTGCCTCACCCCCTGGCAGCGCCTCCAGGGACGCTaGTCCGGGAAAGAGCAGCCGCCGCGACCTCAGGCGGCGGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: CTRGCLTPWQRLQGR*SGKEQPPRPQAAGK Trigger: CTTTCCCGCCGCCTGAGGTCGCGGCGGCTGCTCTTTCCCGGAGCAGCGTCCCTGGAGGCGCTGCCAGGGGGTGAGGCACCCACGCGTGCA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS GCA 90 bp | GCTTGGGATCTCTCCGGGTTCTTCCTTGCGCCGTCCACGCCGCACTaGCCACGAGGGCGTCCCCGCCCGAGGGACAACTCACCGCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: AWDLSGFFLAPSTPH*PRGRPRPRDNSPPG Trigger: CCCGGGCGGTGAGTTGTCCCTCGGGCGGGGACGCCCTCGTGGGCAGTGCGGCGTGGACGGCGCAAGGAAGAACCCGGAGAGATCCCAAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS GCA 90 bp | GCAGCCGCCGCGACCTCAGGCGGCGGGAAAGGTGGGACCTCACAATaGGCCGGAAGCGGTGCCTCGTGGCTTGGGATCTCTCCGGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: AAAATSGGGKGGTSQ*AGSGASWLGISPGS Trigger: AGAACCCGGAGAGATCCCAAGCCACGAGGCACCGCTTCCGGCGCATTGTGAGGTCCCACCTTTCCCGCCGCCTGAGGTCGCGGCGGCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CCA 90 bp | GCTCCGGGAAAGAGCAGCCGCCGCGACCTCAGGCGGCGGGAAAGGTaGGACCTCACAATGCGCCGGAAGCGGTGCCTCGTGGCTTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: APGKSSRRDLRRRER*DLTMRRKRCLVAWD Trigger: ATCCCAAGCCACGAGGCACCGCTTCCGGCGCATTGTGAGGTCCCACCTTTCCCGCCGCCTGAGGTCGCGGCGGCTGCTCTTTCCCGGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CCA 90 bp | GGCGGGAAAGGTGGGACCTCACAATGCGCCGGAAGCGGTGCCTCGTaGCTTGGGATCTCTCCGGGTTCTTCCTTGCGCCGTCCACGCCGC | + |
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Preference number: 5 (lower is better) Translates to: GGKGGTSQCAGSGAS*LGISPGSSLRRPRR Trigger: GCGGCGTGGACGGCGCAAGGAAGAACCCGGAGAGATCCCAAGCCACGAGGCACCGCTTCCGGCGCATTGTGAGGTCCCACCTTTCCCGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS GCA 90 bp | CTCAGGCGGCGGGAAAGGTGGGACCTCACAATGCGCCGGAAGCGGTaGCTCGTGGCTTGGGATCTCTCCGGGTTCTTCCTTGCGCCGTCC | + |
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Preference number: 5 (lower is better) Translates to: LRRRERWDLTMRRKR*LVAWDLSGFFLAPS Trigger: GGACGGCGCAAGGAAGAACCCGGAGAGATCCCAAGCCACGAGGCACCGCTTCCGGCGCATTGTGAGGTCCCACCTTTCCCGCCGCCTGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CCA 90 bp | GAAAGGTGGGACCTCACAATGCGCCGGAAGCGGTGCCTCGTGGCTTaGGATCTCTCCGGGTTCTTCCTTGCGCCGTCCACGCCGCACTGC | + |
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Preference number: 5 (lower is better) Translates to: ERWDLTMRRKRCLVA*DLSGFFLAPSTPHC Trigger: GCAGTGCGGCGTGGACGGCGCAAGGAAGAACCCGGAGAGATCCCAAGCCACGAGGCACCGCTTCCGGCGCATTGTGAGGTCCCACCTTTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS GCA 90 bp | TCTAGGCTAAGCACCTCTCGCCGTAGCACACGGGGTCGGCACCGCTaGCCGGCGAAGTACTTGTTACTTTGCAGTCCAGTACGAAGCGGC | + |
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Preference number: 5 (lower is better) Translates to: SRLSTSRRSTRGRHR*PAKYLLLCSPVRSG Trigger: GCCGCTTCGTACTGGACTGCAAAGTAACAAGTACTTCGCCGGGCAGCGGTGCCGACCCCGTGTGCTACGGCGAGAGGTGCTTAGCCTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CCA 90 bp | AAAGCTCCATCTGGTGGGACGCAGTCTGGGAGGGAAAGGGAGTCCTaGGGACATGTTTTCGTCGGCTCTAGGCTAAGCACCTCTCGCCGT | + |
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Preference number: 5 (lower is better) Translates to: KAPSGGTQSGRERES*GHVFVGSRLSTSRR Trigger: ACGGCGAGAGGTGCTTAGCCTAGAGCCGACGAAAACATGTCCCCAGGACTCCCTTTCCCTCCCAGACTGCGTCCCACCAGATGGAGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CCA 90 bp | TCAGGAATACACTGGTGGTTAAAACAGACGGAAAGCTCCATCTGGTaGGACGCAGTCTGGGAGGGAAAGGGAGTCCTGGGGACATGTTTT | + |
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Preference number: 5 (lower is better) Translates to: SGIHWWLKQTESSIW*DAVWEGKGVLGTCF Trigger: AAAACATGTCCCCAGGACTCCCTTTCCCTCCCAGACTGCGTCCCACCAGATGGAGCTTTCCGTCTGTTTTAACCACCAGTGTATTCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CCA 90 bp | GAGGAGGCTCTGCCTCAAACACTTTCTCAAACTTTTGCCGAGGGGTaGCGAGAAGGTAGACTTCCAGGTCCCACCCGATATAGATTAAGG | + |
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Preference number: 5 (lower is better) Translates to: EEALPQTLSQTFAEG*REGRLPGPTRYRLR Trigger: CCTTAATCTATATCGGGTGGGACCTGGAAGTCTACCTTCTCGCCACCCCTCGGCAAAAGTTTGAGAAAGTGTTTGAGGCAGAGCCTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS TCA 90 bp | ACCGTAGAACTTATAATTCGTTCTAATTCGCAGATGGAGGGCATATaGGAGAGGAGGCTCTGCCTCAAACACTTTCTCAAACTTTTGCCG | + |
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Preference number: 5 (lower is better) Translates to: TVELIIRSNSQMEGI*ERRLCLKHFLKLLP Trigger: CGGCAAAAGTTTGAGAAAGTGTTTGAGGCAGAGCCTCCTCTCTCATATGCCCTCCATCTGCGAATTAGAACGAATTATAAGTTCTACGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS GCA 72 bp | GGGTGCCTCACCCCCTGGCAGCGCCTCCAGGGACGCTaGTCCGGGAAAGAGCAGCCGCCGCGACCTCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: GCLTPWQRLQGR*SGKEQPPRPQA Trigger: CGCCTGAGGTCGCGGCGGCTGCTCTTTCCCGGAGCAGCGTCCCTGGAGGCGCTGCCAGGGGGTGAGGCACCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CAA 90 bp | GCCGGAAGCGGTGCCTCGTGGCTTGGGATCTCTCCGGGTTCTTCCTaGCGCCGTCCACGCCGCACTGCCCACGAGGGCGTCCCCGCCCGA | + |
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Preference number: 6 (lower is better) Translates to: AGSGASWLGISPGSS*RRPRRTAHEGVPAR Trigger: TCGGGCGGGGACGCCCTCGTGGGCAGTGCGGCGTGGACGGCGCAAGGAAGAACCCGGAGAGATCCCAAGCCACGAGGCACCGCTTCCGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS GCA 72 bp | CTCTCCGGGTTCTTCCTTGCGCCGTCCACGCCGCACTaGCCACGAGGGCGTCCCCGCCCGAGGGACAACTCA | + |
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Preference number: 6 (lower is better) Translates to: LSGFFLAPSTPH*PRGRPRPRDNS Trigger: TGAGTTGTCCCTCGGGCGGGGACGCCCTCGTGGGCAGTGCGGCGTGGACGGCGCAAGGAAGAACCCGGAGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CCA 72 bp | AAGAGCAGCCGCCGCGACCTCAGGCGGCGGGAAAGGTaGGACCTCACAATGCGCCGGAAGCGGTGCCTCGTG | + |
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Preference number: 6 (lower is better) Translates to: KSSRRDLRRRER*DLTMRRKRCLV Trigger: CACGAGGCACCGCTTCCGGCGCATTGTGAGGTCCCACCTTTCCCGCCGCCTGAGGTCGCGGCGGCTGCTCTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CCA 72 bp | GGGTACATACGGTGCACGCGTGGGTGCCTCACCCCCTaGCAGCGCCTCCAGGGACGCTGCTCCGGGAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: GYIRCTRGCLTP*QRLQGRCSGKE Trigger: CTCTTTCCCGGAGCAGCGTCCCTGGAGGCGCTGCCAGGGGGTGAGGCACCCACGCGTGCACCGTATGTACCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CAA 72 bp | GGTGCCTCGTGGCTTGGGATCTCTCCGGGTTCTTCCTaGCGCCGTCCACGCCGCACTGCCCACGAGGGCGTC | + |
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Preference number: 6 (lower is better) Translates to: GASWLGISPGSS*RRPRRTAHEGV Trigger: GACGCCCTCGTGGGCAGTGCGGCGTGGACGGCGCAAGGAAGAACCCGGAGAGATCCCAAGCCACGAGGCACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS GCA 72 bp | GCGACCTCAGGCGGCGGGAAAGGTGGGACCTCACAATaGGCCGGAAGCGGTGCCTCGTGGCTTGGGATCTCT | + |
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Preference number: 6 (lower is better) Translates to: ATSGGGKGGTSQ*AGSGASWLGIS Trigger: AGAGATCCCAAGCCACGAGGCACCGCTTCCGGCGCATTGTGAGGTCCCACCTTTCCCGCCGCCTGAGGTCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CAA 90 bp | GGAAAGGTGGGACCTCACAATGCGCCGGAAGCGGTGCCTCGTGGCTaGGGATCTCTCCGGGTTCTTCCTTGCGCCGTCCACGCCGCACTG | + |
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Preference number: 6 (lower is better) Translates to: GKVGPHNAPEAVPRG*GSLRVLPCAVHAAL Trigger: CAGTGCGGCGTGGACGGCGCAAGGAAGAACCCGGAGAGATCCCAAGCCACGAGGCACCGCTTCCGGCGCATTGTGAGGTCCCACCTTTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CCA 72 bp | GACCTCACAATGCGCCGGAAGCGGTGCCTCGTGGCTTaGGATCTCTCCGGGTTCTTCCTTGCGCCGTCCACG | + |
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Preference number: 6 (lower is better) Translates to: DLTMRRKRCLVA*DLSGFFLAPST Trigger: CGTGGACGGCGCAAGGAAGAACCCGGAGAGATCCCAAGCCACGAGGCACCGCTTCCGGCGCATTGTGAGGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CCA 72 bp | GGTGGGACCTCACAATGCGCCGGAAGCGGTGCCTCGTaGCTTGGGATCTCTCCGGGTTCTTCCTTGCGCCGT | + |
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Preference number: 6 (lower is better) Translates to: GGTSQCAGSGAS*LGISPGSSLRR Trigger: ACGGCGCAAGGAAGAACCCGGAGAGATCCCAAGCCACGAGGCACCGCTTCCGGCGCATTGTGAGGTCCCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CAA 72 bp | GGACCTCACAATGCGCCGGAAGCGGTGCCTCGTGGCTaGGGATCTCTCCGGGTTCTTCCTTGCGCCGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: GPHNAPEAVPRG*GSLRVLPCAVH Trigger: GTGGACGGCGCAAGGAAGAACCCGGAGAGATCCCAAGCCACGAGGCACCGCTTCCGGCGCATTGTGAGGTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CAA 90 bp | TCTCGCCGTAGCACACGGGGTCGGCACCGCTGCCCGGCGAAGTACTaGTTACTTTGCAGTCCAGTACGAAGCGGCGGAGTAACCGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SRRSTRGRHRCPAKY*LLCSPVRSGGVTGS Trigger: GGAACCGGTTACTCCGCCGCTTCGTACTGGACTGCAAAGTAACAAGTACTTCGCCGGGCAGCGGTGCCGACCCCGTGTGCTACGGCGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS GCA 72 bp | CGGGAAAGGTGGGACCTCACAATGCGCCGGAAGCGGTaGCTCGTGGCTTGGGATCTCTCCGGGTTCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: RERWDLTMRRKR*LVAWDLSGFFL Trigger: AAGGAAGAACCCGGAGAGATCCCAAGCCACGAGGCACCGCTTCCGGCGCATTGTGAGGTCCCACCTTTCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS GCA 72 bp | AGCACCTCTCGCCGTAGCACACGGGGTCGGCACCGCTaGCCGGCGAAGTACTTGTTACTTTGCAGTCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: STSRRSTRGRHR*PAKYLLLCSPV Trigger: TACTGGACTGCAAAGTAACAAGTACTTCGCCGGGCAGCGGTGCCGACCCCGTGTGCTACGGCGAGAGGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CAA 72 bp | GGGTCGGCACCGCTGCCCGGCGAAGTACTTGTTACTTaGCAGTCCAGTACGAAGCGGCGGAGTAACCGGTTC | + |
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Preference number: 6 (lower is better) Translates to: GSAPLPGEVLVT*QSSTKRRSNRF Trigger: GAACCGGTTACTCCGCCGCTTCGTACTGGACTGCAAAGTAACAAGTACTTCGCCGGGCAGCGGTGCCGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CAA 72 bp | AGCACACGGGGTCGGCACCGCTGCCCGGCGAAGTACTaGTTACTTTGCAGTCCAGTACGAAGCGGCGGAGTA | + |
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Preference number: 6 (lower is better) Translates to: STRGRHRCPAKY*LLCSPVRSGGV Trigger: TACTCCGCCGCTTCGTACTGGACTGCAAAGTAACAAGTACTTCGCCGGGCAGCGGTGCCGACCCCGTGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CCA 72 bp | TCTGGTGGGACGCAGTCTGGGAGGGAAAGGGAGTCCTaGGGACATGTTTTCGTCGGCTCTAGGCTAAGCACC | + |
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Preference number: 6 (lower is better) Translates to: SGGTQSGRERES*GHVFVGSRLST Trigger: GGTGCTTAGCCTAGAGCCGACGAAAACATGTCCCCAGGACTCCCTTTCCCTCCCAGACTGCGTCCCACCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CCA 72 bp | CACTGGTGGTTAAAACAGACGGAAAGCTCCATCTGGTaGGACGCAGTCTGGGAGGGAAAGGGAGTCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: HWWLKQTESSIW*DAVWEGKGVLG Trigger: CCCCAGGACTCCCTTTCCCTCCCAGACTGCGTCCCACCAGATGGAGCTTTCCGTCTGTTTTAACCACCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CCA 72 bp | GAACTAGCCTCATTTCAAGTGCTCAGTGGCCCTAAGTaGCCAAGGGGCTACACTAATGGACAGGGCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: ELASFQVLSGPK*PRGYTNGQGRS Trigger: AGACCTGCCCTGTCCATTAGTGTAGCCCCTTGGCCACTTAGGGCCACTGAGCACTTGAAATGAGGCTAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CAA 72 bp | GAGAGGAGGCTCTGCCTCAAACACTTTCTCAAACTTTaGCCGAGGGGTGGCGAGAAGGTAGACTTCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: ERRLCLKHFLKL*PRGGEKVDFQV Trigger: GACCTGGAAGTCTACCTTCTCGCCACCCCTCGGCAAAAGTTTGAGAAAGTGTTTGAGGCAGAGCCTCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CCA 72 bp | CTGCCTCAAACACTTTCTCAAACTTTTGCCGAGGGGTaGCGAGAAGGTAGACTTCCAGGTCCCACCCGATAT | + |
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Preference number: 6 (lower is better) Translates to: LPQTLSQTFAEG*REGRLPGPTRY Trigger: ATATCGGGTGGGACCTGGAAGTCTACCTTCTCGCCACCCCTCGGCAAAAGTTTGAGAAAGTGTTTGAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CCA 72 bp | ATATTTCAGCGCCTGGGTCAGGCATCAGGAATACACTaGTGGTTAAAACAGACGGAAAGCTCCATCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: IFQRLGQASGIH*WLKQTESSIWW Trigger: CCACCAGATGGAGCTTTCCGTCTGTTTTAACCACCAGTGTATTCCTGATGCCTGACCCAGGCGCTGAAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS TCA 72 bp | GAGTTTAGAACTTTGGTTAAGGCAGCGTCCTGTATTTaGTTCTTTCCCTCTTCCTCTCCGCTAACCCCCTAT | + |
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Preference number: 6 (lower is better) Translates to: EFRTLVKAASCI*FFPSSSPLTPY Trigger: ATAGGGGGTTAGCGGAGAGGAAGAGGGAAAGAATCAAATACAGGACGCTGCCTTAACCAAAGTTCTAAACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS TCA 72 bp | CTTATAATTCGTTCTAATTCGCAGATGGAGGGCATATaGGAGAGGAGGCTCTGCCTCAAACACTTTCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: LIIRSNSQMEGI*ERRLCLKHFLK Trigger: TTTGAGAAAGTGTTTGAGGCAGAGCCTCCTCTCTCATATGCCCTCCATCTGCGAATTAGAACGAATTATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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| CDS CAA 72 bp | AAAGGTCAGCTCTGTCAGGAAGTTCCAGTGCATCATTaGTTCAAAAGTAAAATCAGCCCGTGTTCCAGAATT | + |
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Preference number: 6 (lower is better) Translates to: KGQLCQEVPVHH*FKSKISPCSRI Trigger: AATTCTGGAACACGGGCTGATTTTACTTTTGAACAAATGATGCACTGGAACTTCCTGACAGAGCTGACCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569214.1 |
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