Pregenerated sensors for PAPOLA (Homo sapiens)
Ensembl gene IDs: ENSG00000090060Ensembl transcript IDs: ENST00000216277.12, ENST00000216277.13, ENST00000392990.6, ENST00000553689.5, ENST00000554130.5, ENST00000554887.5, ENST00000555021.1, ENST00000555626.5, ENST00000555701.5, ENST00000555912.1, ENST00000556248.1, ENST00000556459.1, ENST00000556619.5, ENST00000557320.5, ENST00000557471.5, ENST00000618976.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCCATAAACTAGCTACTTTGGTCCCATATGAAAGAGGTAAAAACTaGAGAACACCTGCCACTCTTAACATCAAGGTTAGCTTCTTAAAA | + |
|
Preference number: 1 (lower is better) Translates to: FHKLATLVPYERGKN*RTPATLNIKVSFLK Trigger: TTTTAAGAAGCTAACCTTGATGTTAAGAGTGGCAGGTGTTCTCCAGTTTTTACCTCTTTCATATGGGACCAAAGTAGCTAGTTTATGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| 3UTR GCA 90 bp | CCCAATTTGAACTTCAGATTCACAATTAAAACTTCCCACATATACTaGGGAAGACTTAATCCACTAAAGTTTCCAAGAACTGCTCTTCAA | + |
|
Preference number: 1 (lower is better) Translates to: PNLNFRFTIKTSHIY*GRLNPLKFPRTALQ Trigger: TTGAAGAGCAGTTCTTGGAAACTTTAGTGGATTAAGTCTTCCGCAGTATATGTGGGAAGTTTTAATTGTGAATCTGAAGTTCAAATTGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557471.5 |
||
| 3UTR-3UTR TCA 90 bp | TTTGGTAGCCTTCTCAGACTGAAACCAAAAACGTTCTCTGCCACTCAAAGAACTGAGGCGGGCGGATTATaGGGTCAGGAGATCGAGACC | + |
|
Preference number: 2 (lower is better) Translates to: FGSLLRLKPKTFSATQRTEAGGL*GQEIET Trigger: GGTCTCGATCTCCTGACCTCATAATCCGCCCGCCTC...AGTTCTTTGAGTGGCAGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTGTTATCACTGTCCATAGACAAGTCGAGGCTGCTGTCATTGAGAGCTGTCCATGACCATCCGTGTTaGAACGGACACATTGTACGT | + |
|
Preference number: 2 (lower is better) Translates to: MLLSLSIDKSRLLSLRAVHDHPC*NGHIVR Trigger: ACGTACAATGTGTCCGTTTCAACACGGATGGTCATG...GACAGCTCTCAATGACAGCAGCCTCGACTTGTCTATGGACAGTGATAACAGCAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| 3UTR-3UTR TCA 90 bp | TTTGGTAGCCTTCTCAGACTGAAACCAAAAACGTTCTCTGCCACTCAAAGAACTGGCAGGAGAATAGCATaGATCCAGGAGGCAGAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: FGSLLRLKPKTFSATQRTGRRIA*IQEAEL Trigger: AAGCTCTGCCTCCTGGATTCATGCTATTCTCCTGCC...AGTTCTTTGAGTGGCAGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| 3UTR-3UTR CCA 90 bp | CTTAAACCATTTGGTAGCCTTCTCAGACTGAAACCAAAAACGTTCTCTGCCACTAAAATTAGCCAGGCGTaGTGGCAGGCGCTTGTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LKPFGSLLRLKPKTFSATKISQA*WQALVV Trigger: GACTACAAGCGCCTGCCACCACGCCTGGCTAATTTT...AGTGGCAGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAATGGTTTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| 3UTR-3UTR GCA 90 bp | ATGCTGTTATCACTGTCCATAGACAAGTCGAGGCTGCTGTCATTGAGAGCTGTCGTTCTGTTGTGGGTATaGTGGTGTAATTATAGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: MLLSLSIDKSRLLSLRAVVLLWV*WCNYRH Trigger: ATGCCTATAATTACACCAGCATACCCACAACAGAAC...GACAGCTCTCAATGACAGCAGCCTCGACTTGTCTATGGACAGTGATAACAGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| 3UTR-3UTR TCA 90 bp | CTTAAACCATTTGGTAGCCTTCTCAGACTGAAACCAAAAACGTTCTCTGCCACTAGCCAGAATGTGTACTaGAAAGTGTGGCATGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LKPFGSLLRLKPKTFSATSQNVY*KVWHGS Trigger: AGAACCATGCCACACTTTTCAGTACACATTCTGGCT...AGTGGCAGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAATGGTTTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| 3UTR-3UTR GCA 90 bp | CTTAAACCATTTGGTAGCCTTCTCAGACTGAAACCAAAAACGTTCTCTGCCACTAAAGAACATCTCTTTTaGAGAGGGAGGAGCAGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LKPFGSLLRLKPKTFSATKEHLF*RGRSRS Trigger: ACTCCTGCTCCTCCCTCTGCAAAAGAGATGTTCTTT...AGTGGCAGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAATGGTTTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| 3UTR-3UTR GCA 90 bp | AGGGTAAGTTTATGCAAGGAAGTACAAATAGAATCTGCCTTACTATCCTGGCCATGTGATCTCCAAGGCTaGCTACATGACTACATCATG | + |
|
Preference number: 2 (lower is better) Translates to: RVSLCKEVQIESALLSWPCDLQG*LHDYIM Trigger: CATGATGTAGTCATGTAGGCAGCCTTGGAGATCACA...TGGCCAGGATAGTAAGGCAGATTCTATTTGTACTTCCTTGCATAAACTTACCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| 3UTR CAA 90 bp | GGTGGCATAACCACATTTTCATATGTGTTCCATAAACTAGCTACTTaGGTCCCATATGAAAGAGGTAAAAACTGGAGAACACCTGCCACT | + |
|
Preference number: 2 (lower is better) Translates to: GGITTFSYVFHKLAT*VPYERGKNWRTPAT Trigger: AGTGGCAGGTGTTCTCCAGTTTTTACCTCTTTCATATGGGACCAAAGTAGCTAGTTTATGGAACACATATGAAAATGTGGTTATGCCACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| 3UTR-3UTR CCA 90 bp | CTTAAACCATTTGGTAGCCTTCTCAGACTGAAACCAAAAACGTTCTCTGCCACTAGAACCCTCACCTTTTaGGCCAAGGCAATTAATATA | + |
|
Preference number: 2 (lower is better) Translates to: LKPFGSLLRLKPKTFSATRTLTF*AKAINI Trigger: TATATTAATTGCCTTGGCCCAAAAGGTGAGGGTTCT...AGTGGCAGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAATGGTTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| 3UTR-3UTR TCA 90 bp | CTTAAACCATTTGGTAGCCTTCTCAGACTGAAACCAAAAACGTTCTCTGCCACTAGTGTAATACGGACATaGCCATTCATAAGTAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: LKPFGSLLRLKPKTFSATSVIRT*PFISKR Trigger: CCTTTTACTTATGAATGGTCATGTCCGTATTACACT...AGTGGCAGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAATGGTTTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| 3UTR-3UTR TCA 90 bp | AGGGTAAGTTTATGCAAGGAAGTACAAATAGAATCTGCCTTACTATCCTGGCCAATTTTATACACAATGTaGTCTCCAAGGCTGCCTACA | + |
|
Preference number: 2 (lower is better) Translates to: RVSLCKEVQIESALLSWPILYTM*SPRLPT Trigger: TGTAGGCAGCCTTGGAGATCACATTGTGTATAAAAT...TGGCCAGGATAGTAAGGCAGATTCTATTTGTACTTCCTTGCATAAACTTACCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| 3UTR-3UTR GCA 90 bp | TTTGGTAGCCTTCTCAGACTGAAACCAAAAACGTTCTCTGCCACTCAAAGAACTCAGAGGGTAAGTTTATaGAAGGAAGTACAAATAGAA | + |
|
Preference number: 2 (lower is better) Translates to: FGSLLRLKPKTFSATQRTQRVSL*KEVQIE Trigger: TTCTATTTGTACTTCCTTGCATAAACTTACCCTCTG...AGTTCTTTGAGTGGCAGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| 3UTR CAA 90 bp | GAACTGCTCTTCAAGAGCACAGTAACAAGCTATGCTAATATAAAATaGTACCAAAGTAGTCCTTCTGATCTCAGCAATGCTGAAAGCATT | + |
|
Preference number: 2 (lower is better) Translates to: ELLFKSTVTSYANIK*YQSSPSDLSNAESI Trigger: AATGCTTTCAGCATTGCTGAGATCAGAAGGACTACTTTGGTACAATTTTATATTAGCATAGCTTGTTACTGTGCTCTTGAAGAGCAGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557471.5 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTGTTATCACTGTCCATAGACAAGTCGAGGCTGCTGTCATTGAGAGCTGTCCACTGGGGTTTACCCTaGGGTCCCATACAGGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: MLLSLSIDKSRLLSLRAVHWGLP*GPIQAN Trigger: ATTTGCCTGTATGGGACCCAAGGGTAAACCCCAGTG...GACAGCTCTCAATGACAGCAGCCTCGACTTGTCTATGGACAGTGATAACAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTGCCAGAACTGTTCAATGGACTGGTCTTCGTAGCACTAGTAGGTGAAGGCTCGAGGCTGCTGTCATaGAGAGCTGTCAATTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: ELPELFNGLVFVALVGEGSRLLS*RAVNLT Trigger: TGTCAAATTGACAGCTCTCAATGACAGCAGCCTCGA...GCCTTCACCTACTAGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGCAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTGCCAGAACTGTTCAATGGACTGGTCTTCGTAGCACTAGTAGGTGAAGGCGTGCGAAATTCTTCCTaGTCGGGATTTTCTTTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: ELPELFNGLVFVALVGEGVRNSS*SGFSLG Trigger: ACCCAAAGAAAATCCCGACAAGGAAGAATTTCGCAC...GCCTTCACCTACTAGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGCAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTGTTATCACTGTCCATAGACAAGTCGAGGCTGCTGTCATTGAGAGCTGTCTGTGATAGCAAGACCTaGTTTAAACTCCTCAACCAT | + |
|
Preference number: 3 (lower is better) Translates to: MLLSLSIDKSRLLSLRAVCDSKT*FKLLNH Trigger: ATGGTTGAGGAGTTTAAACAAGGTCTTGCTATCACA...GACAGCTCTCAATGACAGCAGCCTCGACTTGTCTATGGACAGTGATAACAGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| 3UTR-3UTR CAA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTCAGTCATGTCTAGTCTaGTACCCTCCATTCTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: KPKSISVMSSLVPSILLFQSCLV*YPPFSF Trigger: AAAGGAGAATGGAGGGTACAAGACTAGACATGACTG...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000216277.12 ENST00000392990.6 ENST00000556459.1 |
||
| 3UTR-3UTR CAA 90 bp | CTTAAACCATTTGGTAGCCTTCTCAGACTGAAACCAAAAACGTTCTCTGCCACTAATGCCCACACAACTTaGACTTACAAGGTAGTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: LKPFGSLLRLKPKTFSATNAHTT*TYKVVL Trigger: TAGAACTACCTTGTAAGTCAAAGTTGTGTGGGCATT...AGTGGCAGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAATGGTTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| 3UTR-3UTR CAA 90 bp | AATGAACTTAAACCATTTGGTAGCCTTCTCAGACTGAAACCAAAAACGTTCTCTAAAAGAACATCTCTTTaGCAGAGGGAGGAGCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: NELKPFGSLLRLKPKTFSKRTSL*QREEQE Trigger: CTCCTGCTCCTCCCTCTGCAAAAGAGATGTTCTTTT...AGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAATGGTTTAAGTTCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| 3UTR-3UTR CAA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTTATGGACCCCTGAGGTaGTTTTTACCGATTCAATCT | + |
|
Preference number: 3 (lower is better) Translates to: KPKSISVMSSLVPSILLFYGPLR*FLPIQS Trigger: AGATTGAATCGGTAAAAACAACCTCAGGGGTCCATA...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000556459.1 |
||
| 3UTR TCA 72 bp | GAAATGAACTTAAACCATTTGGTAGCCTTCTCAGACTaGAACCAAAAACGTTCTCTGCCACTCAAAGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: EMNLNHLVAFSD*NQKRSLPLKEL Trigger: AAGTTCTTTGAGTGGCAGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAATGGTTTAAGTTCATTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| 3UTR-3UTR CAA 90 bp | AATGAACTTAAACCATTTGGTAGCCTTCTCAGACTGAAACCAAAAACGTTCTCTCATAAACTAGCTACTTaGGTCCCATATGAAAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: NELKPFGSLLRLKPKTFSHKLAT*VPYERG Trigger: ACCTCTTTCATATGGGACCAAAGTAGCTAGTTTATG...AGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAATGGTTTAAGTTCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| 3UTR TCA 72 bp | GTTCATAAGAACAGGAATGGACGATTTATCTTAATTTaGTTAAAAACCAAGAACCCTCACCTTTTGGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: VHKNRNGRFILI*LKTKNPHLLGQ Trigger: TTGGCCCAAAAGGTGAGGGTTCTTGGTTTTTAATCAAATTAAGATAAATCGTCCATTCCTGTTCTTATGAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| 3UTR GCA 72 bp | AACTTCAGATTCACAATTAAAACTTCCCACATATACTaGGGAAGACTTAATCCACTAAAGTTTCCAAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: NFRFTIKTSHIY*GRLNPLKFPRT Trigger: AGTTCTTGGAAACTTTAGTGGATTAAGTCTTCCGCAGTATATGTGGGAAGTTTTAATTGTGAATCTGAAGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557471.5 |
||
| CDS-3UTR TCA 90 bp | ATGCTGTTATCACTGTCCATAGACAAGTCGAGGCTGCTGTCATTGAGAGCTGTCCTGCCGCCCTGGGCATaGTCCACTGAGGCGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: MLLSLSIDKSRLLSLRAVLPPWA*STEAGG Trigger: CCCTCCCGCCTCAGTGGATCATGCCCAGGGCGGCAG...GACAGCTCTCAATGACAGCAGCCTCGACTTGTCTATGGACAGTGATAACAGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR TCA 90 bp | CTTAAACCATTTGGTAGCCTTCTCAGACTGAAACCAAAAACGTTCTCTGCCACTCTGCCGCCCTGGGCATaGTCCACTGAGGCGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKPFGSLLRLKPKTFSATLPPWA*STEAGG Trigger: CCCTCCCGCCTCAGTGGATCATGCCCAGGGCGGCAG...AGTGGCAGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAATGGTTTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| CDS-3UTR TCA 90 bp | GAGCTGCCAGAACTGTTCAATGGACTGGTCTTCGTAGCACTAGTAGGTGAAGGCGGACTGTTTCTGCCCTaGGAGCTGCCAGAACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELPELFNGLVFVALVGEGGLFLP*ELPELF Trigger: GAACAGTTCTGGCAGCTCTCAGGGCAGAAACAGTCC...GCCTTCACCTACTAGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR GCA 90 bp | GAGCTGCCAGAACTGTTCAATGGACTGGTCTTCGTAGCACTAGTAGGTGAAGGCGAGCAGGACTGTTTCTaGCCTGAGAGCTGCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ELPELFNGLVFVALVGEGEQDCF*PESCQN Trigger: GTTCTGGCAGCTCTCAGGGCAGAAACAGTCCTGCTC...GCCTTCACCTACTAGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR CCA 90 bp | GAGCTGCCAGAACTGTTCAATGGACTGGTCTTCGTAGCACTAGTAGGTGAAGGCTCCCTGTGTTGTAACTaGAAACGGCATCGTCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ELPELFNGLVFVALVGEGSLCCN*KRHRLR Trigger: CCGGAGACGATGCCGTTTCCAGTTACAACACAGGGA...GCCTTCACCTACTAGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGCAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR CCA 90 bp | GAGCTGCCAGAACTGTTCAATGGACTGGTCTTCGTAGCACTAGTAGGTGAAGGCGACCGTAGGCTTTGGTaGTGGAGAAATGGCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ELPELFNGLVFVALVGEGDRRLW*WRNGWL Trigger: CAACCAGCCATTTCTCCACCACCAAAGCCTACGGTC...GCCTTCACCTACTAGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGCAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR TCA 90 bp | GTCCTTCTGATCTCAGCAATGCTGAAAGCATTACTAAAGAATAACAGGATCAAACTGCCGCCCTGGGCATaGTCCACTGAGGCGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLLISAMLKALLKNNRIKLPPWA*STEAGG Trigger: CCCTCCCGCCTCAGTGGATCATGCCCAGGGCGGCAG...TTTGATCCTGTTATTCTTTAGTAATGCTTTCAGCATTGCTGAGATCAGAAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557471.5 |
||
| CDS-3UTR CCA 90 bp | ATGCTGTTATCACTGTCCATAGACAAGTCGAGGCTGCTGTCATTGAGAGCTGTCGGAGACCGTAGGCTTTaGTGGTGGAGAAATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MLLSLSIDKSRLLSLRAVGDRRL*WWRNGW Trigger: CCAGCCATTTCTCCACCACCAAAGCCTACGGTCTCC...GACAGCTCTCAATGACAGCAGCCTCGACTTGTCTATGGACAGTGATAACAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR TCA 90 bp | GAGCTGCCAGAACTGTTCAATGGACTGGTCTTCGTAGCACTAGTAGGTGAAGGCCATGACCATCCGTGTTaGAACGGACACATTGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: ELPELFNGLVFVALVGEGHDHPC*NGHIVR Trigger: ACGTACAATGTGTCCGTTTCAACACGGATGGTCATG...GCCTTCACCTACTAGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGCAGCTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR TCA 90 bp | GAGCTGCCAGAACTGTTCAATGGACTGGTCTTCGTAGCACTAGTAGGTGAAGGCACTCGATGTACCCCCTaGGCTTTCACTGGAATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ELPELFNGLVFVALVGEGTRCTP*AFTGIY Trigger: GTAAATTCCAGTGAAAGCTCAGGGGGTACATCGAGT...GCCTTCACCTACTAGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGCAGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR TCA 90 bp | GAGCTGCCAGAACTGTTCAATGGACTGGTCTTCGTAGCACTAGTAGGTGAAGGCGGTTGTGTGGCAGTTTaGGGAATGCTTTCACTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ELPELFNGLVFVALVGEGGCVAV*GMLSLD Trigger: ATCGAGTGAAAGCATTCCTCAAACTGCCACACAACC...GCCTTCACCTACTAGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGCAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR TCA 90 bp | GAGCTGCCAGAACTGTTCAATGGACTGGTCTTCGTAGCACTAGTAGGTGAAGGCAGTTGCTGCATTTCCTaGAGATCTAGGTGGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ELPELFNGLVFVALVGEGSCCIS*RSRWWV Trigger: AACCCACCACCTAGATCTTCAGGAAATGCAGCAACT...GCCTTCACCTACTAGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGCAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR GCA 90 bp | ATGCTGTTATCACTGTCCATAGACAAGTCGAGGCTGCTGTCATTGAGAGCTGTCGTTGGTCACAGATGCTaGTGTTACAGCTGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MLLSLSIDKSRLLSLRAVVGHRC*CYSWSR Trigger: CCTGCTCCAGCTGTAACAGCAGCATCTGTGACCAAC...GACAGCTCTCAATGACAGCAGCCTCGACTTGTCTATGGACAGTGATAACAGCAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR GCA 90 bp | GAGCTGCCAGAACTGTTCAATGGACTGGTCTTCGTAGCACTAGTAGGTGAAGGCTGGCAGTTTGAGGAATaGTTTCACTCGATGTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: ELPELFNGLVFVALVGEGWQFEE*FHSMYP Trigger: GGGGTACATCGAGTGAAAGCATTCCTCAAACTGCCA...GCCTTCACCTACTAGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR CCA 90 bp | ATGCTGTTATCACTGTCCATAGACAAGTCGAGGCTGCTGTCATTGAGAGCTGTCTGCTGCTGTTACAGCTaGAGCAGGACTGTTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: MLLSLSIDKSRLLSLRAVCCCYS*SRTVSA Trigger: GGCAGAAACAGTCCTGCTCCAGCTGTAACAGCAGCA...GACAGCTCTCAATGACAGCAGCCTCGACTTGTCTATGGACAGTGATAACAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR TCA 90 bp | ATGCTGTTATCACTGTCCATAGACAAGTCGAGGCTGCTGTCATTGAGAGCTGTCGTACTGGATGTTTTCTaGGAGGCCAACAGAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MLLSLSIDKSRLLSLRAVVLDVF*EANREA Trigger: GGCTTCTCTGTTGGCCTCTCAGAAAACATCCAGTAC...GACAGCTCTCAATGACAGCAGCCTCGACTTGTCTATGGACAGTGATAACAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR GCA 90 bp | ATGCTGTTATCACTGTCCATAGACAAGTCGAGGCTGCTGTCATTGAGAGCTGTCTTCTGCCCTGAGAGCTaGCAGAACTGTTCAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: MLLSLSIDKSRLLSLRAVFCPES*QNCSMD Trigger: GTCCATTGAACAGTTCTGGCAGCTCTCAGGGCAGAA...GACAGCTCTCAATGACAGCAGCCTCGACTTGTCTATGGACAGTGATAACAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR CCA 90 bp | ATGCTGTTATCACTGTCCATAGACAAGTCGAGGCTGCTGTCATTGAGAGCTGTCCGTAGGCTTTGGTGGTaGAGAAATGGCTGGTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MLLSLSIDKSRLLSLRAVRRLWW*RNGWLC Trigger: ACACAACCAGCCATTTCTCCACCACCAAAGCCTACG...GACAGCTCTCAATGACAGCAGCCTCGACTTGTCTATGGACAGTGATAACAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR TCA 90 bp | AAGAACATCTCTTTTGCAGAGGGAGGAGCAGGAGTTCATAAGAACAGGAATGGAGGCAGGAGAATAGCATaGATCCAGGAGGCAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KNISFAEGGAGVHKNRNGGRRIA*IQEAEL Trigger: AAGCTCTGCCTCCTGGATTCATGCTATTCTCCTGCC...TCCATTCCTGTTCTTATGAACTCCTGCTCCTCCCTCTGCAAAAGAGATGTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| CDS-3UTR CCA 90 bp | AAGAACATCTCTTTTGCAGAGGGAGGAGCAGGAGTTCATAAGAACAGGAATGGATCCCTGTGTTGTAACTaGAAACGGCATCGTCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KNISFAEGGAGVHKNRNGSLCCN*KRHRLR Trigger: CCGGAGACGATGCCGTTTCCAGTTACAACACAGGGA...TCCATTCCTGTTCTTATGAACTCCTGCTCCTCCCTCTGCAAAAGAGATGTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| CDS-3UTR CCA 90 bp | ATGCTGTTATCACTGTCCATAGACAAGTCGAGGCTGCTGTCATTGAGAGCTGTCGCCAGAACTGTTCAATaGACTGGTCTTCGTAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: MLLSLSIDKSRLLSLRAVARTVQ*TGLRST Trigger: AGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGC...GACAGCTCTCAATGACAGCAGCCTCGACTTGTCTATGGACAGTGATAACAGCAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR GCA 90 bp | GAGCTGCCAGAACTGTTCAATGGACTGGTCTTCGTAGCACTAGTAGGTGAAGGCGTTCTGTTGTGGGTATaGTGGTGTAATTATAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ELPELFNGLVFVALVGEGVLLWV*WCNYRH Trigger: ATGCCTATAATTACACCAGCATACCCACAACAGAAC...GCCTTCACCTACTAGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGCAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR TCA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTGGACTGTTTCTGCCCTaGGAGCTGCCAGAACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPKSISVMSSLVPSILLFGLFLP*ELPELF Trigger: GAACAGTTCTGGCAGCTCTCAGGGCAGAAACAGTCC...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000392990.6 ENST00000556459.1 |
||
| CDS-3UTR GCA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTGAGCAGGACTGTTTCTaGCCTGAGAGCTGCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KPKSISVMSSLVPSILLFEQDCF*PESCQN Trigger: GTTCTGGCAGCTCTCAGGGCAGAAACAGTCCTGCTC...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000392990.6 ENST00000556459.1 |
||
| CDS-3UTR CCA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTGGAGACCGTAGGCTTTaGTGGTGGAGAAATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPKSISVMSSLVPSILLFGDRRL*WWRNGW Trigger: CCAGCCATTTCTCCACCACCAAAGCCTACGGTCTCC...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000392990.6 ENST00000556459.1 |
||
| CDS-3UTR GCA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTGTTGGTCACAGATGCTaGTGTTACAGCTGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPKSISVMSSLVPSILLFVGHRC*CYSWSR Trigger: CCTGCTCCAGCTGTAACAGCAGCATCTGTGACCAAC...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000392990.6 ENST00000556459.1 |
||
| CDS-3UTR GCA 90 bp | GAGCTGCCAGAACTGTTCAATGGACTGGTCTTCGTAGCACTAGTAGGTGAAGGCATCAAGTTGTTCCTTTaGTTCTGTTTTATCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELPELFNGLVFVALVGEGIKLFL*FCFIMS Trigger: GGACATGATAAAACAGAAGCAAAGGAACAACTTGAT...GCCTTCACCTACTAGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGCAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR CCA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTTCCCTGTGTTGTAACTaGAAACGGCATCGTCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KPKSISVMSSLVPSILLFSLCCN*KRHRLR Trigger: CCGGAGACGATGCCGTTTCCAGTTACAACACAGGGA...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000392990.6 |
||
| CDS-3UTR CCA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTTGCTGCTGTTACAGCTaGAGCAGGACTGTTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KPKSISVMSSLVPSILLFCCCYS*SRTVSA Trigger: GGCAGAAACAGTCCTGCTCCAGCTGTAACAGCAGCA...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000392990.6 ENST00000556459.1 |
||
| CDS-3UTR CCA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTGACCGTAGGCTTTGGTaGTGGAGAAATGGCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KPKSISVMSSLVPSILLFDRRLW*WRNGWL Trigger: CAACCAGCCATTTCTCCACCACCAAAGCCTACGGTC...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000392990.6 ENST00000556459.1 |
||
| CDS-3UTR TCA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTGTACTGGATGTTTTCTaGGAGGCCAACAGAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KPKSISVMSSLVPSILLFVLDVF*EANREA Trigger: GGCTTCTCTGTTGGCCTCTCAGAAAACATCCAGTAC...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392990.6 |
||
| CDS-3UTR TCA 90 bp | TTTGGTAGCCTTCTCAGACTGAAACCAAAAACGTTCTCTGCCACTCAAAGAACTAGCCAGAATGTGTACTaGAAAGTGTGGCATGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FGSLLRLKPKTFSATQRTSQNVY*KVWHGS Trigger: AGAACCATGCCACACTTTTCAGTACACATTCTGGCT...AGTTCTTTGAGTGGCAGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| CDS-3UTR GCA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTTTCTGCCCTGAGAGCTaGCAGAACTGTTCAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KPKSISVMSSLVPSILLFFCPES*QNCSMD Trigger: GTCCATTGAACAGTTCTGGCAGCTCTCAGGGCAGAA...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENST00000392990.6 ENST00000556459.1 |
||
| CDS-3UTR GCA 90 bp | TTTGGTAGCCTTCTCAGACTGAAACCAAAAACGTTCTCTGCCACTCAAAGAACTTGTGATCTCCAAGGCTaGCTACATGACTACATCATG | + |
|
Preference number: 4 (lower is better) Translates to: FGSLLRLKPKTFSATQRTCDLQG*LHDYIM Trigger: CATGATGTAGTCATGTAGGCAGCCTTGGAGATCACA...AGTTCTTTGAGTGGCAGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| CDS-3UTR CCA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTCGTAGGCTTTGGTGGTaGAGAAATGGCTGGTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KPKSISVMSSLVPSILLFRRLWW*RNGWLC Trigger: ACACAACCAGCCATTTCTCCACCACCAAAGCCTACG...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000392990.6 ENST00000556459.1 |
||
| CDS-3UTR TCA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTCATGACCATCCGTGTTaGAACGGACACATTGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: KPKSISVMSSLVPSILLFHDHPC*NGHIVR Trigger: ACGTACAATGTGTCCGTTTCAACACGGATGGTCATG...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392990.6 |
||
| CDS-3UTR TCA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTACTCGATGTACCCCCTaGGCTTTCACTGGAATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: KPKSISVMSSLVPSILLFTRCTP*AFTGIY Trigger: GTAAATTCCAGTGAAAGCTCAGGGGGTACATCGAGT...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000392990.6 ENST00000556459.1 |
||
| CDS-3UTR TCA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTGGTTGTGTGGCAGTTTaGGGAATGCTTTCACTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: KPKSISVMSSLVPSILLFGCVAV*GMLSLD Trigger: ATCGAGTGAAAGCATTCCTCAAACTGCCACACAACC...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000392990.6 ENST00000556459.1 |
||
| CDS-3UTR TCA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTAGTTGCTGCATTTCCTaGAGATCTAGGTGGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KPKSISVMSSLVPSILLFSCCIS*RSRWWV Trigger: AACCCACCACCTAGATCTTCAGGAAATGCAGCAACT...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000392990.6 ENST00000556459.1 |
||
| CDS-3UTR TCA 90 bp | AGGGTAAGTTTATGCAAGGAAGTACAAATAGAATCTGCCTTACTATCCTGGCCAGTAGCCTTCTCAGACTaGAACCAAAAACGTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVSLCKEVQIESALLSWPVAFSD*NQKRSL Trigger: CAGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTAC...TGGCCAGGATAGTAAGGCAGATTCTATTTGTACTTCCTTGCATAAACTTACCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| CDS-3UTR GCA 90 bp | AAGAACATCTCTTTTGCAGAGGGAGGAGCAGGAGTTCATAAGAACAGGAATGGAATCAACATGTCTTGGTaGAACACACAACGCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KNISFAEGGAGVHKNRNGINMSW*NTQRIN Trigger: ATTGATGCGTTGTGTGTTGCACCAAGACATGTTGAT...TCCATTCCTGTTCTTATGAACTCCTGCTCCTCCCTCTGCAAAAGAGATGTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| CDS-3UTR GCA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTTGGCAGTTTGAGGAATaGTTTCACTCGATGTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: KPKSISVMSSLVPSILLFWQFEE*FHSMYP Trigger: GGGGTACATCGAGTGAAAGCATTCCTCAAACTGCCA...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000392990.6 ENST00000556459.1 |
||
| CDS-3UTR GCA 90 bp | AAGAACATCTCTTTTGCAGAGGGAGGAGCAGGAGTTCATAAGAACAGGAATGGAGATCCTTCTTCATTCTaGCTTCTTGGTACATACAAC | + |
|
Preference number: 4 (lower is better) Translates to: KNISFAEGGAGVHKNRNGDPSSF*LLGTYN Trigger: GTTGTATGTACCAAGAAGGCAGAATGAAGAAGGATC...TCCATTCCTGTTCTTATGAACTCCTGCTCCTCCCTCTGCAAAAGAGATGTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| CDS-3UTR CCA 90 bp | GTACAAAAGTCAGATGGTCTTTTTAAGTGTCCTGAGTATACCATTAATGACAGATCCCTGTGTTGTAACTaGAAACGGCATCGTCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VQKSDGLFKCPEYTINDRSLCCN*KRHRLR Trigger: CCGGAGACGATGCCGTTTCCAGTTACAACACAGGGA...TCTGTCATTAATGGTATACTCAGGACACTTAAAAAGACCATCTGACTTTTGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557471.5 |
||
| CDS-3UTR CCA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTGCCAGAACTGTTCAATaGACTGGTCTTCGTAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: KPKSISVMSSLVPSILLFARTVQ*TGLRST Trigger: AGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGC...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000392990.6 ENST00000556459.1 |
||
| CDS-3UTR TCA 90 bp | AAGAACATCTCTTTTGCAGAGGGAGGAGCAGGAGTTCATAAGAACAGGAATGGAAGTGTAATACGGACATaGCCATTCATAAGTAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KNISFAEGGAGVHKNRNGSVIRT*PFISKR Trigger: CCTTTTACTTATGAATGGTCATGTCCGTATTACACT...TCCATTCCTGTTCTTATGAACTCCTGCTCCTCCCTCTGCAAAAGAGATGTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| CDS-3UTR CCA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTTCGATCAACATGTCTTaGTGCAACACACAACGCATC | + |
|
Preference number: 4 (lower is better) Translates to: KPKSISVMSSLVPSILLFSINMS*CNTQRI Trigger: GATGCGTTGTGTGTTGCACCAAGACATGTTGATCGA...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000392990.6 |
||
| CDS-3UTR CCA 90 bp | CTTAAACCATTTGGTAGCCTTCTCAGACTGAAACCAAAAACGTTCTCTGCCACTACAGAGTTTAATAACTaGTACGAATGCCTCTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LKPFGSLLRLKPKTFSATTEFNN*YECLFN Trigger: GTTGAAGAGGCATTCGTACCAGTTATTAAACTCTGT...AGTGGCAGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAATGGTTTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| CDS-3UTR TCA 90 bp | AGGGTAAGTTTATGCAAGGAAGTACAAATAGAATCTGCCTTACTATCCTGGCCATTTAAAAGTTACTTCTaGTCACAGGCAAAGGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RVSLCKEVQIESALLSWPFKSYF*SQAKGY Trigger: ATACCCCTTTGCCTGTGATCAGAAGTAACTTTTAAA...TGGCCAGGATAGTAAGGCAGATTCTATTTGTACTTCCTTGCATAAACTTACCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| CDS-3UTR GCA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTATCAACATGTCTTGGTaGAACACACAACGCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KPKSISVMSSLVPSILLFINMSW*NTQRIN Trigger: ATTGATGCGTTGTGTGTTGCACCAAGACATGTTGAT...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392990.6 |
||
| CDS-3UTR GCA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTGTTCTGTTGTGGGTATaGTGGTGTAATTATAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KPKSISVMSSLVPSILLFVLLWV*WCNYRH Trigger: ATGCCTATAATTACACCAGCATACCCACAACAGAAC...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392990.6 |
||
| CDS-3UTR GCA 90 bp | CTTAAACCATTTGGTAGCCTTCTCAGACTGAAACCAAAAACGTTCTCTGCCACTCAGAGGGTAAGTTTATaGAAGGAAGTACAAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKPFGSLLRLKPKTFSATQRVSL*KEVQIE Trigger: TTCTATTTGTACTTCCTTGCATAAACTTACCCTCTG...AGTGGCAGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAATGGTTTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| CDS-3UTR TCA 90 bp | AATGAACTTAAACCATTTGGTAGCCTTCTCAGACTGAAACCAAAAACGTTCTCTATTTTATACACAATGTaGTCTCCAAGGCTGCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: NELKPFGSLLRLKPKTFSILYTM*SPRLPT Trigger: TGTAGGCAGCCTTGGAGATCACATTGTGTATAAAAT...AGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAATGGTTTAAGTTCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| CDS-3UTR GCA 90 bp | GTCCTTCTGATCTCAGCAATGCTGAAAGCATTACTAAAGAATAACAGGATCAAAATCAACATGTCTTGGTaGAACACACAACGCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLLISAMLKALLKNNRIKINMSW*NTQRIN Trigger: ATTGATGCGTTGTGTGTTGCACCAAGACATGTTGAT...TTTGATCCTGTTATTCTTTAGTAATGCTTTCAGCATTGCTGAGATCAGAAGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557471.5 |
||
| CDS-3UTR GCA 90 bp | AGGGTAAGTTTATGCAAGGAAGTACAAATAGAATCTGCCTTACTATCCTGGCCAACCAAAAACGTTCTCTaGCACTCAAAGAACTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: RVSLCKEVQIESALLSWPTKNVL*HSKNFK Trigger: TTTAAAGTTCTTTGAGTGGCAGAGAACGTTTTTGGT...TGGCCAGGATAGTAAGGCAGATTCTATTTGTACTTCCTTGCATAAACTTACCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| CDS-3UTR GCA 90 bp | GTCCTTCTGATCTCAGCAATGCTGAAAGCATTACTAAAGAATAACAGGATCAAAACTTCCCACATATACTaGGGAAGACTTAATCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: VLLISAMLKALLKNNRIKTSHIY*GRLNPL Trigger: TAGTGGATTAAGTCTTCCGCAGTATATGTGGGAAGT...TTTGATCCTGTTATTCTTTAGTAATGCTTTCAGCATTGCTGAGATCAGAAGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557471.5 |
||
| CDS-3UTR CCA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTACAGAGTTTAATAACTaGTACGAATGCCTCTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KPKSISVMSSLVPSILLFTEFNN*YECLFN Trigger: GTTGAAGAGGCATTCGTACCAGTTATTAAACTCTGT...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392990.6 |
||
| CDS-3UTR CCA 90 bp | AGATTCACAATTAAAACTTCCCACATATACTGCGGAAGACTTAATCCACTAAAGACAGAGTTTAATAACTaGTACGAATGCCTCTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RFTIKTSHIYCGRLNPLKTEFNN*YECLFN Trigger: GTTGAAGAGGCATTCGTACCAGTTATTAAACTCTGT...CTTTAGTGGATTAAGTCTTCCGCAGTATATGTGGGAAGTTTTAATTGTGAATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557471.5 |
||
| 3UTR CAA 72 bp | TTCAAGAGCACAGTAACAAGCTATGCTAATATAAAATaGTACCAAAGTAGTCCTTCTGATCTCAGCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: FKSTVTSYANIK*YQSSPSDLSNA Trigger: AGCATTGCTGAGATCAGAAGGACTACTTTGGTACAATTTTATATTAGCATAGCTTGTTACTGTGCTCTTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557471.5 |
||
| CDS GCA 90 bp | GTGGAAGGTGCAGTAAGCCAAGACTGTGCCACTGCATCCAGCCTGTaGAACAGAGCAAGACCCAAAGACAGTACAGCCTCGGGATGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VEGAVSQDCATASSL*NRARPKDSTASGCL Trigger: CAGGCATCCCGAGGCTGTACTGTCTTTGGGTCTTGCTCTGTTGCACAGGCTGGATGCAGTGGCACAGTCTTGGCTTACTGCACCTTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555912.1 |
||
| CDS-3UTR CAA 90 bp | GAGCTGCCAGAACTGTTCAATGGACTGGTCTTCGTAGCACTAGTAGGTGAAGGCACGCAGTCAGTCTCCTaGGGGGCTGCTAAGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: ELPELFNGLVFVALVGEGTQSVS*GAAKLI Trigger: TATCAGCTTAGCAGCCCCCAAGGAGACTGACTGCGT...GCCTTCACCTACTAGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGCAGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR CAA 90 bp | GAGCTGCCAGAACTGTTCAATGGACTGGTCTTCGTAGCACTAGTAGGTGAAGGCTGGTTGTGTGGCAGTTaGAGGAATGCTTTCACTCGA | + |
|
Preference number: 5 (lower is better) Translates to: ELPELFNGLVFVALVGEGWLCGS*RNAFTR Trigger: TCGAGTGAAAGCATTCCTCAAACTGCCACACAACCA...GCCTTCACCTACTAGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGCAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR CAA 90 bp | GAGCTGCCAGAACTGTTCAATGGACTGGTCTTCGTAGCACTAGTAGGTGAAGGCCTGCATTTCCTGAAGTaGCTGCATTTCCTGAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: ELPELFNGLVFVALVGEGLHFLK*LHFLKI Trigger: GATCTTCAGGAAATGCAGCAACTTCAGGAAATGCAG...GCCTTCACCTACTAGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGCAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS-3UTR CAA 90 bp | CTTAAACCATTTGGTAGCCTTCTCAGACTGAAACCAAAAACGTTCTCTGCCACTACGCAGTCAGTCTCCTaGGGGGCTGCTAAGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: LKPFGSLLRLKPKTFSATTQSVS*GAAKLI Trigger: TATCAGCTTAGCAGCCCCCAAGGAGACTGACTGCGT...AGTGGCAGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAATGGTTTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| CDS-3UTR CAA 90 bp | GAGCTGCCAGAACTGTTCAATGGACTGGTCTTCGTAGCACTAGTAGGTGAAGGCTTGAGAGCTGTCAATTaGACACCTTCTGTTGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: ELPELFNGLVFVALVGEGLRAVN*TPSVEC Trigger: GCATTCAACAGAAGGTGTCAAATTGACAGCTCTCAA...GCCTTCACCTACTAGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGCAGCTC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS TCA 90 bp | ACCGCTGGCATTTTAGCAAAGGTTGTCTTGGTCATAATTTCCCCTTaGCTGTGTTTCCAGCCCTTAATCTATATCGGGTGGGACCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TAGILAKVVLVIISP*LCFQPLIYIGWDLE Trigger: TTCCAGGTCCCACCCGATATAGATTAAGGGCTGGAAACACAGTCAAGGGGAAATTATGACCAAGACAACCTTTGCTAAAATGCCAGCGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554887.5 |
||
| CDS-3UTR CAA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTACGCAGTCAGTCTCCTaGGGGGCTGCTAAGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: KPKSISVMSSLVPSILLFTQSVS*GAAKLI Trigger: TATCAGCTTAGCAGCCCCCAAGGAGACTGACTGCGT...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000392990.6 |
||
| CDS-3UTR CAA 90 bp | GAGCTGCCAGAACTGTTCAATGGACTGGTCTTCGTAGCACTAGTAGGTGAAGGCCTGATTGAGTTGTACTaGTCTCTGTATCAAGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ELPELFNGLVFVALVGEGLIELY*SLYQVV Trigger: AACAACTTGATACAGAGACAAGTACAACTCAATCAG...GCCTTCACCTACTAGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGCAGCTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553689.5 |
||
| CDS CCA 90 bp | ATTTTGATCCTGCAGCATCCTCTATTTATAGTGGCCCAAGTAAACTaGGAGCCCAAAGAAAGATGGCTCAGCAAGTACTTTCATGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ILILQHPLFIVAQVN*EPKERWLSKYFHGG Trigger: TCCACCATGAAAGTACTTGCTGAGCCATCTTTCTTTGGGCTCCCAGTTTACTTGGGCCACTATAAATAGAGGATGCTGCAGGATCAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555912.1 |
||
| CDS-3UTR CAA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTCACTGGGGTTTACCCTaGGGTCCCATACAGGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: KPKSISVMSSLVPSILLFHWGLP*GPIQAN Trigger: ATTTGCCTGTATGGGACCCAAGGGTAAACCCCAGTG...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392990.6 |
||
| CDS-3UTR CAA 90 bp | TTTGGTAGCCTTCTCAGACTGAAACCAAAAACGTTCTCTGCCACTCAAAGAACTAAAAGAACATCTCTTTaGCAGAGGGAGGAGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FGSLLRLKPKTFSATQRTKRTSL*QREEQE Trigger: CTCCTGCTCCTCCCTCTGCAAAAGAGATGTTCTTTT...AGTTCTTTGAGTGGCAGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| CDS CCA 90 bp | CCTCTATTTATAGTGGCCCAAGTAAACTGGGAGCCCAAAGAAAGATaGCTCAGCAAGTACTTTCATGGTGGAGAGGGAATTATTCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: PLFIVAQVNWEPKER*LSKYFHGGEGIIQT Trigger: TGTTTGAATAATTCCCTCTCCACCATGAAAGTACTTGCTGAGCCATCTTTCTTTGGGCTCCCAGTTTACTTGGGCCACTATAAATAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555912.1 |
||
| CDS-3UTR CAA 90 bp | GTACAAAAGTCAGATGGTCTTTTTAAGTGTCCTGAGTATACCATTAATGACAGAACGCAGTCAGTCTCCTaGGGGGCTGCTAAGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: VQKSDGLFKCPEYTINDRTQSVS*GAAKLI Trigger: TATCAGCTTAGCAGCCCCCAAGGAGACTGACTGCGT...TCTGTCATTAATGGTATACTCAGGACACTTAAAAAGACCATCTGACTTTTGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000557471.5 |
||
| CDS-3UTR CAA 90 bp | AAGAACATCTCTTTTGCAGAGGGAGGAGCAGGAGTTCATAAGAACAGGAATGGAGTGTCCACTTCAACCTaGAACAGAATAAATCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: KNISFAEGGAGVHKNRNGVSTST*NRINLH Trigger: GTGGAGATTTATTCTGTTCAAGGTTGAAGTGGACAC...TCCATTCCTGTTCTTATGAACTCCTGCTCCTCCCTCTGCAAAAGAGATGTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| CDS-3UTR CAA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTTCGAGGCTGCTGTCATaGAGAGCTGTCAATTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: KPKSISVMSSLVPSILLFSRLLS*RAVNLT Trigger: TGTCAAATTGACAGCTCTCAATGACAGCAGCCTCGA...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000392990.6 ENST00000556459.1 |
||
| CDS-3UTR CAA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTTGGTTGTGTGGCAGTTaGAGGAATGCTTTCACTCGA | + |
|
Preference number: 5 (lower is better) Translates to: KPKSISVMSSLVPSILLFWLCGS*RNAFTR Trigger: TCGAGTGAAAGCATTCCTCAAACTGCCACACAACCA...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000392990.6 ENST00000556459.1 |
||
| CDS-3UTR CAA 90 bp | AAGAACATCTCTTTTGCAGAGGGAGGAGCAGGAGTTCATAAGAACAGGAATGGACATAAACTAGCTACTTaGGTCCCATATGAAAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KNISFAEGGAGVHKNRNGHKLAT*VPYERG Trigger: ACCTCTTTCATATGGGACCAAAGTAGCTAGTTTATG...TCCATTCCTGTTCTTATGAACTCCTGCTCCTCCCTCTGCAAAAGAGATGTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| CDS TCA 90 bp | GGGTGCATCCACTTGCCACTGTATACAGATGTACTGTTTTTGTCATaGCTGATGTATGCCTACAGAACTTATGTTGCTACAAATGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GCIHLPLYTDVLFLS*LMYAYRTYVATNVA Trigger: TGCTACATTTGTAGCAACATAAGTTCTGTAGGCATACATCAGTCATGACAAAAACAGTACATCTGTATACAGTGGCAAGTGGATGCACCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000618976.2 |
||
| CDS-3UTR CAA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTTTCGATCAACATGTCTaGGTGCAACACACAACGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KPKSISVMSSLVPSILLFFDQHV*VQHTTH Trigger: ATGCGTTGTGTGTTGCACCAAGACATGTTGATCGAA...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000392990.6 |
||
| CDS-3UTR CAA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTGTGCGAAATTCTTCCTaGTCGGGATTTTCTTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KPKSISVMSSLVPSILLFVRNSS*SGFSLG Trigger: ACCCAAAGAAAATCCCGACAAGGAAGAATTTCGCAC...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392990.6 |
||
| CDS-3UTR CAA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTCTGCATTTCCTGAAGTaGCTGCATTTCCTGAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: KPKSISVMSSLVPSILLFLHFLK*LHFLKI Trigger: GATCTTCAGGAAATGCAGCAACTTCAGGAAATGCAG...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000392990.6 ENST00000556459.1 |
||
| CDS-3UTR CAA 90 bp | CTTAAACCATTTGGTAGCCTTCTCAGACTGAAACCAAAAACGTTCTCTGCCACTTCAATAGCACTGGATTaGGCCATTCCCTGTTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LKPFGSLLRLKPKTFSATSIALD*AIPCLK Trigger: TTTTAAACAGGGAATGGCCAAATCCAGTGCTATTGA...AGTGGCAGAGAACGTTTTTGGTTTCAGTCTGAGAAGGCTACCAAATGGTTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557320.5 |
||
| CDS-3UTR CAA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTTTGAGAGCTGTCAATTaGACACCTTCTGTTGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: KPKSISVMSSLVPSILLFLRAVN*TPSVEC Trigger: GCATTCAACAGAAGGTGTCAAATTGACAGCTCTCAA...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENST00000392990.6 ENST00000556459.1 |
||
| CDS GCA 90 bp | TGTACTGTTTTTGTCATGACTGATGTATGCCTACAGAACTTATGTTaGTACAAATGTAGCAGGAGTTCAGTTAGATCGGGCAGAAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: CTVFVMTDVCLQNLC*YKCSRSSVRSGRKI Trigger: GATTTTTCTGCCCGATCTAACTGAACTCCTGCTACATTTGTAGCAACATAAGTTCTGTAGGCATACATCAGTCATGACAAAAACAGTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000618976.2 |
||
| CDS-3UTR CAA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTTGTGATAGCAAGACCTaGTTTAAACTCCTCAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: KPKSISVMSSLVPSILLFCDSKT*FKLLNH Trigger: ATGGTTGAGGAGTTTAAACAAGGTCTTGCTATCACA...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000392990.6 |
||
| CDS-3UTR CAA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTTGTCTCTGTATCAAGTaGTTCCTCTTCTGTTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KPKSISVMSSLVPSILLFCLCIK*FLFCFG Trigger: ACCAAAACAGAAGAGGAACAACTTGATACAGAGACA...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000392990.6 |
||
| CDS-3UTR CAA 90 bp | AAACCCAAATCCATTTCAGTCATGTCTAGTCTTGTACCCTCCATTCTCCTTTTTCTGATTGAGTTGTACTaGTCTCTGTATCAAGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KPKSISVMSSLVPSILLFLIELY*SLYQVV Trigger: AACAACTTGATACAGAGACAAGTACAACTCAATCAG...AAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392990.6 |
||
| CDS GCA 90 bp | TTTACCTACATACAACAACAGCCAATCAGTTTCTTCAAGTACATATaGAACAGATACTTGGGCTTTTTACCCCTTGTTAAACTGAACCAA | + |
|
Preference number: 5 (lower is better) Translates to: FTYIQQQPISFFKYI*NRYLGFLPLVKLNQ Trigger: TTGGTTCAGTTTAACAAGGGGTAAAAAGCCCAAGTATCTGTTGCATATGTACTTGAAGAAACTGATTGGCTGTTGTTGTATGTAGGTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555021.1 |
||
| CDS-3UTR CAA 90 bp | AGATTCACAATTAAAACTTCCCACATATACTGCGGAAGACTTAATCCACTAAAGGTAACCTGCCCCAATTaGAACTTCAGATTCACAATT | + |
|
Preference number: 5 (lower is better) Translates to: RFTIKTSHIYCGRLNPLKVTCPN*NFRFTI Trigger: AATTGTGAATCTGAAGTTCAAATTGGGGCAGGTTAC...CTTTAGTGGATTAAGTCTTCCGCAGTATATGTGGGAAGTTTTAATTGTGAATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557471.5 |
||
| CDS CCA 72 bp | TTGATTTTCTTTGTGGACGGGGCGGAGAAGCTGGAGTaGCCGGGCGAGTTAGAGGTTCCGCCAGCAATTCCG | + |
|
Preference number: 6 (lower is better) Translates to: LIFFVDGAEKLE*PGELEVPPAIP Trigger: CGGAATTGCTGGCGGAACCTCTAACTCGCCCGGCCACTCCAGCTTCTCCGCCCCGTCCACAAAGAAAATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555626.5 |
||
| CDS GCA 72 bp | AGGCCTGAAAATCAATTGAGCCCAGGAGGTGGAAGGTaGAGTAAGCCAAGACTGTGCCACTGCATCCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RPENQLSPGGGR*SKPRLCHCIQP Trigger: AGGCTGGATGCAGTGGCACAGTCTTGGCTTACTGCACCTTCCACCTCCTGGGCTCAATTGATTTTCAGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555912.1 |
||
| CDS CAA 72 bp | TCCCAGCTACTCAGGTGGCTGAGGCCTGAAAATCAATaGAGCCCAGGAGGTGGAAGGTGCAGTAAGCCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SQLLRWLRPENQ*SPGGGRCSKPR Trigger: TCTTGGCTTACTGCACCTTCCACCTCCTGGGCTCAATTGATTTTCAGGCCTCAGCCACCTGAGTAGCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555912.1 |
||
| CDS CAA 90 bp | CACCGCTGGCATTTTAGCAAAGGTTGTCTTGGTCATAATTTCCCCTaGACTGTGTTTCCAGCCCTTAATCTATATCGGGTGGGACCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: HRWHFSKGCLGHNFP*TVFPALNLYRVGPG Trigger: TCCAGGTCCCACCCGATATAGATTAAGGGCTGGAAACACAGTCAAGGGGAAATTATGACCAAGACAACCTTTGCTAAAATGCCAGCGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554887.5 |
||
| CDS CCA 72 bp | ATAGTGGCCCAAGTAAACTGGGAGCCCAAAGAAAGATaGCTCAGCAAGTACTTTCATGGTGGAGAGGGAATT | + |
|
Preference number: 6 (lower is better) Translates to: IVAQVNWEPKER*LSKYFHGGEGI Trigger: AATTCCCTCTCCACCATGAAAGTACTTGCTGAGCCATCTTTCTTTGGGCTCCCAGTTTACTTGGGCCACTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555912.1 |
||
| CDS CAA 90 bp | TCCCTGTTACAAAGGTATAAGCAGCTCTGGGACAGAAAGGTGGTTTaGTTCCTTTTGTCTGTTCTCATCAGCACACCATACAGTGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: SLLQRYKQLWDRKVV*FLLSVLISTPYSAL Trigger: CAGTGCACTGTATGGTGTGCTGATGAGAACAGACAAAAGGAACAAAACCACCTTTCTGTCCCAGAGCTGCTTATACCTTTGTAACAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555701.5 |
||
| CDS CCA 72 bp | CTGCAGCATCCTCTATTTATAGTGGCCCAAGTAAACTaGGAGCCCAAAGAAAGATGGCTCAGCAAGTACTTT | + |
|
Preference number: 6 (lower is better) Translates to: LQHPLFIVAQVN*EPKERWLSKYF Trigger: AAAGTACTTGCTGAGCCATCTTTCTTTGGGCTCCCAGTTTACTTGGGCCACTATAAATAGAGGATGCTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555912.1 |
||
| CDS CAA 72 bp | TCAATTAGTTTCTGTGTAAGTACGCAGTCAGTCTCCTaGGGGGCTGCTAAGCTGATAGGAGAAGTAATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SISFCVSTQSVS*GAAKLIGEVMP Trigger: TGGCATTACTTCTCCTATCAGCTTAGCAGCCCCCAAGGAGACTGACTGCGTACTTACACAGAAACTAATTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENST00000216277.13 ENST00000392990.6 ENST00000553689.5 ENST00000554130.5 ENST00000554887.5 ENST00000555626.5 ENST00000556248.1 ENST00000556619.5 ENST00000557320.5 ENST00000557471.5 ENST00000618976.2 |
||
| CDS CCA 72 bp | GGAGCCCAAAGAAAGATGGCTCAGCAAGTACTTTCATaGTGGAGAGGGAATTATTCAAACATACACCCAACA | + |
|
Preference number: 6 (lower is better) Translates to: GAQRKMAQQVLS*WRGNYSNIHPT Trigger: TGTTGGGTGTATGTTTGAATAATTCCCTCTCCACCATGAAAGTACTTGCTGAGCCATCTTTCTTTGGGCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555912.1 |
||
| CDS TCA 72 bp | ATTTTAGCAAAGGTTGTCTTGGTCATAATTTCCCCTTaGCTGTGTTTCCAGCCCTTAATCTATATCGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ILAKVVLVIISP*LCFQPLIYIGW Trigger: CCACCCGATATAGATTAAGGGCTGGAAACACAGTCAAGGGGAAATTATGACCAAGACAACCTTTGCTAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554887.5 |
||
| CDS GCA 72 bp | TTTGTCATGACTGATGTATGCCTACAGAACTTATGTTaGTACAAATGTAGCAGGAGTTCAGTTAGATCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: FVMTDVCLQNLC*YKCSRSSVRSG Trigger: GCCCGATCTAACTGAACTCCTGCTACATTTGTAGCAACATAAGTTCTGTAGGCATACATCAGTCATGACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618976.2 |
||
| CDS CCA 72 bp | CTGGACTTTTATAGGAACATCAATGGCAGTCACCGCTaGCATTTTAGCAAAGGTTGTCTTGGTCATAATTTC | + |
|
Preference number: 6 (lower is better) Translates to: LDFYRNINGSHR*HFSKGCLGHNF Trigger: GAAATTATGACCAAGACAACCTTTGCTAAAATGCCAGCGGTGACTGCCATTGATGTTCCTATAAAAGTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554887.5 |
||
| CDS CAA 72 bp | GGATGCCTGAGTTGTACCTACTCTGCCACTAGAAGGTaGAGAAAAACTGTTCAAGCTTTATTGCCTCTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: GCLSCTYSATRR*RKTVQALLPLL Trigger: TAAAAGAGGCAATAAAGCTTGAACAGTTTTTCTCAACCTTCTAGTGGCAGAGTAGGTACAACTCAGGCATCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555912.1 |
||
| CDS CAA 72 bp | CATTTTAGCAAAGGTTGTCTTGGTCATAATTTCCCCTaGACTGTGTTTCCAGCCCTTAATCTATATCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: HFSKGCLGHNFP*TVFPALNLYRV Trigger: CACCCGATATAGATTAAGGGCTGGAAACACAGTCAAGGGGAAATTATGACCAAGACAACCTTTGCTAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554887.5 |
||
| CDS CAA 72 bp | CAAGCTTTATTGCCTCTTTTAGTCTCAGGCTCCTGTTaGTTATGTGAGAATAACAGTACTGGAAGAACTAAA | + |
|
Preference number: 6 (lower is better) Translates to: QALLPLLVSGSC*LCENNSTGRTK Trigger: TTTAGTTCTTCCAGTACTGTTATTCTCACATAACAAACAGGAGCCTGAGACTAAAAGAGGCAATAAAGCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555912.1 |
||
| CDS CAA 72 bp | TCAAAGATTTCATCTAAACTAATGATCTGCTTCAATTaGGATTTTGGCAACCTTACTAGAAAGTGTGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SKISSKLMICFN*DFGNLTRKCAC Trigger: GCAGGCACACTTTCTAGTAAGGTTGCCAAAATCCAAATTGAAGCAGATCATTAGTTTAGATGAAATCTTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555021.1 |
||