RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PAOX (Homo sapiens)

Ensembl gene IDs: ENSG00000148832

Ensembl transcript IDs: ENST00000278060.10, ENST00000356306.9, ENST00000357296.7, ENST00000368535.2, ENST00000476834.6, ENST00000480071.2, ENST00000483211.6, ENST00000528127.1, ENST00000529585.5

Found 411 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGGTGCGCCGGGAACCGGTCTCCATCCTCACACTCTACCGACACTaGAAAGGTCTCCCCGGGAAAGGCTGCCTCCTGGAAGGACCCGTT +
Preference number: 1 (lower is better)
Translates to: MVRREPVSILTLYRH*KGLPGKGCLLEGPV
Trigger: AACGGGTCCTTCCAGGAGGCAGCCTTTCCCGGGGAGACCTTTCCAGTGTCGGTAGAGTGTGAGGATGGAGACCGGTTCCCGGCGCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
3UTR CCA 90 bp CCCACAGAGAACGTGGACAGACCTAAGGGCACGGTGACGATGACATaGTGCGCCGGGAACCGGTCTCCATCCTCACACTCTACCGACACT +
Preference number: 1 (lower is better)
Translates to: PTENVDRPKGTVTMT*CAGNRSPSSHSTDT
Trigger: AGTGTCGGTAGAGTGTGAGGATGGAGACCGGTTCCCGGCGCACCATGTCATCGTCACCGTGCCCTTAGGTCTGTCCACGTTCTCTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483211.6
ENST00000529585.5
3UTR TCA 90 bp AGAGAACGTGGACAGACGCAAAGGCAGGCAGGACCACAAAGCCAATaGGCTTCCGGAACCAGGCGTCCTGTAGCTCAGGGGCAGCATCCT +
Preference number: 1 (lower is better)
Translates to: RERGQTQRQAGPQSQ*ASGTRRPVAQGQHP
Trigger: AGGATGCTGCCCCTGAGCTACAGGACGCCTGGTTCCGGAAGCTCATTGGCTTTGTGGTCCTGCCTGCCTTTGCGTCTGTCCACGTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476834.6
3UTR GCA 90 bp ACAGAGAACGTGGACAGACCTAAGGGCACGGTGACGATGACATGGTaGGCCGGGAACCGGTCTCCATCCTCACACTCTACCGACACTGGA +
Preference number: 1 (lower is better)
Translates to: TENVDRPKGTVTMTW*AGNRSPSSHSTDTG
Trigger: TCCAGTGTCGGTAGAGTGTGAGGATGGAGACCGGTTCCCGGCGCACCATGTCATCGTCACCGTGCCCTTAGGTCTGTCCACGTTCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483211.6
ENST00000529585.5
3UTR CCA 90 bp TCTCCCCGGGAAAGGCTGCCTCCTGGAAGGACCCGTTCCAGTGGATaGTCTTCACAGGCTTCTCAAAAACTACAGTGTCCTCCGGCAGGG +
Preference number: 1 (lower is better)
Translates to: SPRERLPPGRTRSSG*SSQASQKLQCPPAG
Trigger: CCCTGCCGGAGGACACTGTAGTTTTTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGTCCTTCCAGGAGGCAGCCTTTCCCGGGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
3UTR GCA 90 bp ATCCTCACACTCTACCGACACTGGAAAGGTCTCCCCGGGAAAGGCTaGCTCCTGGAAGGACCCGTTCCAGTGGATGGTCTTCACAGGCTT +
Preference number: 1 (lower is better)
Translates to: ILTLYRHWKGLPGKG*LLEGPVPVDGLHRL
Trigger: AAGCCTGTGAAGACCATCCACTGGAACGGGTCCTTCCAGGAGGCAGCCTTTCCCGGGGAGACCTTTCCAGTGTCGGTAGAGTGTGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
3UTR CCA 90 bp AAGGTCTCCCCGGGAAAGGCTGCCTCCTGGAAGGACCCGTTCCAGTaGATGGTCTTCACAGGCTTCTCAAAAACTACAGTGTCCTCCGGC +
Preference number: 1 (lower is better)
Translates to: KVSPGKAASWKDPFQ*MVFTGFSKTTVSSG
Trigger: GCCGGAGGACACTGTAGTTTTTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGTCCTTCCAGGAGGCAGCCTTTCCCGGGGAGACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
3UTR CCA 90 bp CACTCTACCGACACTGGAAAGGTCTCCCCGGGAAAGGCTGCCTCCTaGAAGGACCCGTTCCAGTGGATGGTCTTCACAGGCTTCTCAAAA +
Preference number: 1 (lower is better)
Translates to: HSTDTGKVSPGKAAS*KDPFQWMVFTGFSK
Trigger: TTTTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGTCCTTCCAGGAGGCAGCCTTTCCCGGGGAGACCTTTCCAGTGTCGGTAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
3UTR GCA 90 bp TTGGAAACACTGACAAGTTCTAAGGGCACGGTGACGATGACATGGTaGGCCGGGAACCGGTCTCCATCCTCACACTCTACCGACACTGGA +
Preference number: 1 (lower is better)
Translates to: LETLTSSKGTVTMTW*AGNRSPSSHSTDTG
Trigger: TCCAGTGTCGGTAGAGTGTGAGGATGGAGACCGGTTCCCGGCGCACCATGTCATCGTCACCGTGCCCTTAGAACTTGTCAGTGTTTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476834.6
3UTR GCA 90 bp CTCCAGGAAGATTTTGTTGTTGGTCCCAAAGCCTATCTTCCTGATTaGTTCTGCCTTCTCAGCCGGCAGGGGAGGGTCAAAGAAGGTGTC +
Preference number: 1 (lower is better)
Translates to: LQEDFVVGPKAYLPD*FCLLSRQGRVKEGV
Trigger: GACACCTTCTTTGACCCTCCCCTGCCGGCTGAGAAGGCAGAAGCAATCAGGAAGATAGGCTTTGGGACCAACAACAAAATCTTCCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476834.6
3UTR TCA 90 bp CAAACTCCAGGAAGATTTTGTTGTTGGTCCCAAAGCCTATCTTCCTaGTTGCTTCTGCCTTCTCAGCCGGCAGGGGAGGGTCAAAGAAGG +
Preference number: 1 (lower is better)
Translates to: QTPGRFCCWSQSLSS*LLLPSQPAGEGQRR
Trigger: CCTTCTTTGACCCTCCCCTGCCGGCTGAGAAGGCAGAAGCAATCAGGAAGATAGGCTTTGGGACCAACAACAAAATCTTCCTGGAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476834.6
3UTR GCA 90 bp GAAGATTTTGTTGTTGGTCCCAAAGCCTATCTTCCTGATTGCTTCTaGCTTCTCAGCCGGCAGGGGAGGGTCAAAGAAGGTGTCCAAATG +
Preference number: 1 (lower is better)
Translates to: EDFVVGPKAYLPDCF*LLSRQGRVKEGVQM
Trigger: CATTTGGACACCTTCTTTGACCCTCCCCTGCCGGCTGAGAAGGCAGAAGCAATCAGGAAGATAGGCTTTGGGACCAACAACAAAATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476834.6
3UTR-3UTR CCA 90 bp GGCCCACAGACTGAGGAGGCGGTCGGCCTCCCTCCATCCCGACAGCAGAGCCCCCCCGCAAACAGGATCTaGAGCTGGGCGCCGGCGCCG +
Preference number: 2 (lower is better)
Translates to: GPQTEEAVGLPPSRQQSPPANRI*SWAPAP
Trigger: CGGCGCCGGCGCCCAGCTCCAGATCCTGTTTGCGGG...GGGGCTCTGCTGTCGGGATGGAGGGAGGCCGACCGCCTCCTCAGTCTGTGGGCC
72% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
3UTR-3UTR CCA 90 bp GACCGCAGGACGCTCTTGGGCGCGGGGAGCCGTGGGTTTCCTGTCACTCTCCGGACCGCAGGACGCTCTTaGGCGCGGGGAGCCGTGGGT +
Preference number: 2 (lower is better)
Translates to: DRRTLLGAGSRGFPVTLRTAGRS*ARGAVG
Trigger: ACCCACGGCTCCCCGCGCCCAAGAGCGTCCTGCGGT...CCGGAGAGTGACAGGAAACCCACGGCTCCCCGCGCCCAAGAGCGTCCTGCGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476834.6
ENST00000483211.6
3UTR-3UTR CCA 90 bp CGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGCTGGGCGCCGGCGCCCCCGCAAACAGGATCTaGAGCTGGGCGCCGGCGCCG +
Preference number: 2 (lower is better)
Translates to: RAMCGFPRKQDLELGAGAPANRI*SWAPAP
Trigger: CGGCGCCGGCGCCCAGCTCCAGATCCTGTTTGCGGG...GGCGCCGGCGCCCAGCTCCAGATCCTGTTTGCGGGGGAAGCCACACATCGCACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
3UTR-3UTR CCA 90 bp GGCCCACAGACTGAGGAGGCGGTCGGCCTCCCTCCATCCCGACAGCAGAGCCCCTACCCCCGACACGGGTaGAACAGAGTAGGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: GPQTEEAVGLPPSRQQSPYPRHG*NRVGWA
Trigger: GGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTA...GGGGCTCTGCTGTCGGGATGGAGGGAGGCCGACCGCCTCCTCAGTCTGTGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR GCA 90 bp GTAGCTGTAGGACCCCCTAGTGTACGGGGCGCTGTGCCAGCGAGACCGCAGGACGTGTACGGGGCGCTGTaGCAGCGAGACCGCAGGACG +
Preference number: 2 (lower is better)
Translates to: VAVGPPSVRGAVPARPQDVYGAL*QRDRRT
Trigger: CGTCCTGCGGTCTCGCTGGCACAGCGCCCCGTACAC...GTCCTGCGGTCTCGCTGGCACAGCGCCCCGTACACTAGGGGGTCCTACAGCTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
3UTR-3UTR CCA 90 bp CAGGTCGCCCCCAGTACTGCCCACGGCCACGTAGCTGTAGGACCCCCTAGTGTAACCGCAGGACGCTCTTaGGCGCGGGGAGCCGTGGGT +
Preference number: 2 (lower is better)
Translates to: QVAPSTAHGHVAVGPPSVTAGRS*ARGAVG
Trigger: ACCCACGGCTCCCCGCGCCCAAGAGCGTCCTGCGGT...TACACTAGGGGGTCCTACAGCTACGTGGCCGTGGGCAGTACTGGGGGCGACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
3UTR-3UTR CCA 90 bp GCCCACAGACTGAGGAGGCGGTCGGCCTCCCTCCATCCCGACAGCAGAGCCCCGGGAAAGGCTGCCTCCTaGAAGGACCCGTTCCAGTGG +
Preference number: 2 (lower is better)
Translates to: AHRLRRRSASLHPDSRAPGKAAS*KDPFQW
Trigger: CCACTGGAACGGGTCCTTCCAGGAGGCAGCCTTTCC...CGGGGCTCTGCTGTCGGGATGGAGGGAGGCCGACCGCCTCCTCAGTCTGTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR CCA 90 bp GATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGCTGGGCGCCGGCGCCGTCTGTACCCCCGACACGGGTaGAACAGAGTAGGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: DVWLPPQTGSGAGRRRRLYPRHG*NRVGWA
Trigger: GGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTA...CAGACGGCGCCGGCGCCCAGCTCCAGATCCTGTTTGCGGGGGAAGCCACACATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
3UTR-3UTR CCA 90 bp ACTGGAAAGGTCTCCCCGGGAAAGGCTGCCTCCTGGAAGGACCCGTTCCAGTGGACCGCAGGACGCTCTTaGGCGCGGGGAGCCGTGGGT +
Preference number: 2 (lower is better)
Translates to: TGKVSPGKAASWKDPFQWTAGRS*ARGAVG
Trigger: ACCCACGGCTCCCCGCGCCCAAGAGCGTCCTGCGGT...CCACTGGAACGGGTCCTTCCAGGAGGCAGCCTTTCCCGGGGAGACCTTTCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476834.6
ENST00000483211.6
3UTR-3UTR GCA 90 bp CAGGTCGCCCCCAGTACTGCCCACGGCCACGTAGCTGTAGGACCCCCTAGTGTAGGTCGCCCCCAGTACTaGCCACGGCCACGTAGCTGT +
Preference number: 2 (lower is better)
Translates to: QVAPSTAHGHVAVGPPSVGRPQY*PRPRSC
Trigger: ACAGCTACGTGGCCGTGGGCAGTACTGGGGGCGACC...TACACTAGGGGGTCCTACAGCTACGTGGCCGTGGGCAGTACTGGGGGCGACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
3UTR-3UTR GCA 90 bp CGACGTGTCCTCCCACACCAGCTGGATCAGCTGGCAGTCTGGCTCCCAGAAGGGGGTCGCCCCCAGTACTaGCCACGGCCACGTAGCTGT +
Preference number: 2 (lower is better)
Translates to: RRVLPHQLDQLAVWLPEGGRPQY*PRPRSC
Trigger: ACAGCTACGTGGCCGTGGGCAGTACTGGGGGCGACC...CCCTTCTGGGAGCCAGACTGCCAGCTGATCCAGCTGGTGTGGGAGGACACGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000476834.6
3UTR-3UTR GCA 90 bp GGCCCACAGACTGAGGAGGCGGTCGGCCTCCCTCCATCCCGACAGCAGAGCCCCTCGTGGAGTAAAACGTaGGATGTGTGGCTTCCCCCG +
Preference number: 2 (lower is better)
Translates to: GPQTEEAVGLPPSRQQSPSWSKT*DVWLPP
Trigger: CGGGGGAAGCCACACATCGCACGTTTTACTCCACGA...GGGGCTCTGCTGTCGGGATGGAGGGAGGCCGACCGCCTCCTCAGTCTGTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR CCA 90 bp CGAGACCGCAGGACGCTCTTGGGCGCGGGGAGCCGTGGGTTTCCTGTCACTCTCACGGTGACGATGACATaGTGCGCCGGGAACCGGTCT +
Preference number: 2 (lower is better)
Translates to: RDRRTLLGAGSRGFPVTLTVTMT*CAGNRS
Trigger: AGACCGGTTCCCGGCGCACCATGTCATCGTCACCGT...GAGAGTGACAGGAAACCCACGGCTCCCCGCGCCCAAGAGCGTCCTGCGGTCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476834.6
ENST00000483211.6
3UTR-3UTR CCA 90 bp CGACGTGTCCTCCCACACCAGCTGGATCAGCTGGCAGTCTGGCTCCCAGAAGGGTACCCCCGACACGGGTaGAACAGAGTAGGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: RRVLPHQLDQLAVWLPEGYPRHG*NRVGWA
Trigger: GGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTA...CCCTTCTGGGAGCCAGACTGCCAGCTGATCCAGCTGGTGTGGGAGGACACGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476834.6
3UTR-3UTR CCA 90 bp GGCCCACAGACTGAGGAGGCGGTCGGCCTCCCTCCATCCCGACAGCAGAGCCCCAAAACGTGCGATGTGTaGCTTCCCCCGCAAACAGGA +
Preference number: 2 (lower is better)
Translates to: GPQTEEAVGLPPSRQQSPKTCDV*LPPQTG
Trigger: TCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTT...GGGGCTCTGCTGTCGGGATGGAGGGAGGCCGACCGCCTCCTCAGTCTGTGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR GCA 90 bp AAGGCAGGCAGGACCACAAAGCCAATGAGCTTCCGGAACCAGGCGTCCTGTAGCGTGTACGGGGCGCTGTaGCAGCGAGACCGCAGGACG +
Preference number: 2 (lower is better)
Translates to: KAGRTTKPMSFRNQASCSVYGAL*QRDRRT
Trigger: CGTCCTGCGGTCTCGCTGGCACAGCGCCCCGTACAC...GCTACAGGACGCCTGGTTCCGGAAGCTCATTGGCTTTGTGGTCCTGCCTGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476834.6
3UTR-3UTR GCA 90 bp GACATGGTGCGCCGGGAACCGGTCTCCATCCTCACACTCTACCGACACTGGAAAGTGTACGGGGCGCTGTaGCAGCGAGACCGCAGGACG +
Preference number: 2 (lower is better)
Translates to: DMVRREPVSILTLYRHWKVYGAL*QRDRRT
Trigger: CGTCCTGCGGTCTCGCTGGCACAGCGCCCCGTACAC...TTTCCAGTGTCGGTAGAGTGTGAGGATGGAGACCGGTTCCCGGCGCACCATGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476834.6
ENST00000483211.6
3UTR-3UTR CCA 90 bp AGTAAAACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGCTGGGCGCGGCCCAGCTAGAGCCTaGGCCTGGGCTGCTGCACCT +
Preference number: 2 (lower is better)
Translates to: SKTCDVWLPPQTGSGAGRGPARA*AWAAAP
Trigger: AGGTGCAGCAGCCCAGGCCCAGGCTCTAGCTGGGCC...GCGCCCAGCTCCAGATCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
3UTR-3UTR CCA 90 bp GAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGGCCCAGCTAAAACGTGCGATGTGTaGCTTCCCCCGCAAACAGGA +
Preference number: 2 (lower is better)
Translates to: EGPSLPPTRVEQSRLGPAKTCDV*LPPQTG
Trigger: TCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTT...AGCTGGGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR CCA 90 bp ACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGCTGGGCGCCGGCGCACACTCTACCGACACTaGAAAGGTCTCCCCGGGAAA +
Preference number: 2 (lower is better)
Translates to: TCDVWLPPQTGSGAGRRRTLYRH*KGLPGK
Trigger: TTTCCCGGGGAGACCTTTCCAGTGTCGGTAGAGTGT...GCGCCGGCGCCCAGCTCCAGATCCTGTTTGCGGGGGAAGCCACACATCGCACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476834.6
ENST00000483211.6
3UTR-3UTR GCA 90 bp AAGGCAGGCAGGACCACAAAGCCAATGAGCTTCCGGAACCAGGCGTCCTGTAGCCTCCCCGGGAAAGGCTaGCTCCTGGAAGGACCCGTT +
Preference number: 2 (lower is better)
Translates to: KAGRTTKPMSFRNQASCSLPGKG*LLEGPV
Trigger: AACGGGTCCTTCCAGGAGGCAGCCTTTCCCGGGGAG...GCTACAGGACGCCTGGTTCCGGAAGCTCATTGGCTTTGTGGTCCTGCCTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476834.6
3UTR-3UTR TCA 90 bp CGACGTGTCCTCCCACACCAGCTGGATCAGCTGGCAGTCTGGCTCCCAGAAGGGAACAGACACAAGAACTaGGAAGGTGGCCCTGGTTAC +
Preference number: 2 (lower is better)
Translates to: RRVLPHQLDQLAVWLPEGNRHKN*EGGPGY
Trigger: GTAACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTT...CCCTTCTGGGAGCCAGACTGCCAGCTGATCCAGCTGGTGTGGGAGGACACGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476834.6
3UTR-3UTR CCA 90 bp AAACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGCTGGGCGCCGGCCTGAGAAGGTGGCCCTaGTTACCAAAAACCAGAGGA +
Preference number: 2 (lower is better)
Translates to: KRAMCGFPRKQDLELGAGLRRWP*LPKTRG
Trigger: TCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAG...GCCGGCGCCCAGCTCCAGATCCTGTTTGCGGGGGAAGCCACACATCGCACGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
3UTR-3UTR CCA 90 bp AACGTGGACAGACCTAAGGGCACGGTGACGATGACATGGTGCGCCGGGAACCGGAAGGACCCGTTCCAGTaGATGGTCTTCACAGGCTTC +
Preference number: 2 (lower is better)
Translates to: NVDRPKGTVTMTWCAGNRKDPFQ*MVFTGF
Trigger: GAAGCCTGTGAAGACCATCCACTGGAACGGGTCCTT...CCGGTTCCCGGCGCACCATGTCATCGTCACCGTGCCCTTAGGTCTGTCCACGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR GCA 90 bp AGTAAAACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGCTGGGCGCTCGTGGAGTAAAACGTaGGATGTGTGGCTTCCCCCG +
Preference number: 2 (lower is better)
Translates to: SKTCDVWLPPQTGSGAGRSWSKT*DVWLPP
Trigger: CGGGGGAAGCCACACATCGCACGTTTTACTCCACGA...GCGCCCAGCTCCAGATCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
3UTR-3UTR GCA 90 bp CCGTGGGTTTCCTGTCACTCTCCGGAGCACTTGGGTGAGACACAGAAGTACTTCGTGACGATGACATGGTaGGCCGGGAACCGGTCTCCA +
Preference number: 2 (lower is better)
Translates to: PWVSCHSPEHLGETQKYFVTMTW*AGNRSP
Trigger: TGGAGACCGGTTCCCGGCGCACCATGTCATCGTCAC...GAAGTACTTCTGTGTCTCACCCAAGTGCTCCGGAGAGTGACAGGAAACCCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476834.6
ENST00000483211.6
3UTR-3UTR GCA 90 bp CCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCACTGGGCTGCTGCACCTaGGGGGCCCACAGACTGAGG +
Preference number: 2 (lower is better)
Translates to: PWLPKTRGPSLTSPNFKPLGCCT*GAHRLR
Trigger: CCTCAGTCTGTGGGCCCCGCAGGTGCAGCAGCCCAG...TGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR CCA 90 bp TCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGTACCCCCGACACGGGTaGAACAGAGTAGGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: SAQVNPGQTPITDTRTEKYPRHG*NRVGWA
Trigger: GGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTA...CTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278060.10
3UTR-3UTR CCA 90 bp TCTCCGGAGCACTTGGGTGAGACACAGAAGTACTTCTTCATCCGACAGAGTCTCGAGCCCCGTGCGTCGTaGAGTAAAACGTGCGATGTG +
Preference number: 2 (lower is better)
Translates to: SPEHLGETQKYFFIRQSLEPRAS*SKTCDV
Trigger: CACATCGCACGTTTTACTCCACGACGCACGGGGCTC...GAGACTCTGTCGGATGAAGAAGTACTTCTGTGTCTCACCCAAGTGCTCCGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR CCA 90 bp AAAGCCTATCTTCCTGATTGCTTCTGCCTTCTCAGCCGGCAGGGGAGGGTCAAAACACTCTACCGACACTaGAAAGGTCTCCCCGGGAAA +
Preference number: 2 (lower is better)
Translates to: KAYLPDCFCLLSRQGRVKTLYRH*KGLPGK
Trigger: TTTCCCGGGGAGACCTTTCCAGTGTCGGTAGAGTGT...TTTGACCCTCCCCTGCCGGCTGAGAAGGCAGAAGCAATCAGGAAGATAGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476834.6
3UTR-3UTR GCA 90 bp CCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGTGACGATGACATGGTaGGCCGGGAACCGGTCTCCA +
Preference number: 2 (lower is better)
Translates to: PWLPKTRGPSLTSPNFKPVTMTW*AGNRSP
Trigger: TGGAGACCGGTTCCCGGCGCACCATGTCATCGTCAC...TGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR CCA 90 bp AACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCTACCCCCGACACGGGTaGAACAGAGTAGGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: NIPKFQARLKSVRRNEGPYPRHG*NRVGWA
Trigger: GGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTA...GGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR CCA 90 bp AAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGGCCCAGCTAGAGCCTaGGCCTGGGCTGCTGCACCT +
Preference number: 2 (lower is better)
Translates to: KNQRTLINIPKFQARLKSGPARA*AWAAAP
Trigger: AGGTGCAGCAGCCCAGGCCCAGGCTCTAGCTGGGCC...AGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR CCA 90 bp ATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCAGCGAGCCCCGTGCGTCGTaGAGTAAAACGTGCGATGTG +
Preference number: 2 (lower is better)
Translates to: IPKFQARLKSVRRNEGPSEPRAS*SKTCDV
Trigger: CACATCGCACGTTTTACTCCACGACGCACGGGGCTC...GCTGGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR CCA 90 bp AAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTGAGCCCCGTGCGTCGTaGAGTAAAACGTGCGATGTG +
Preference number: 2 (lower is better)
Translates to: KVALVTKNQRTLINIPKFEPRAS*SKTCDV
Trigger: CACATCGCACGTTTTACTCCACGACGCACGGGGCTC...AAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR CCA 90 bp CTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAACCCGTTCCAGTGGATaGTCTTCACAGGCTTCTCAA +
Preference number: 2 (lower is better)
Translates to: LRRWPWLPKTRGPSLTSPTRSSG*SSQASQ
Trigger: TTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGT...TGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR CCA 90 bp GCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAAAACGTGCGATGTGTaGCTTCCCCCGCAAACAGGA +
Preference number: 2 (lower is better)
Translates to: ALVTKNQRTLINIPKFQAKTCDV*LPPQTG
Trigger: TCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTT...GGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR TCA 90 bp GCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAACAGACACAAGAACTaGGAAGGTGGCCCTGGTTAC +
Preference number: 2 (lower is better)
Translates to: ALVTKNQRTLINIPKFQANRHKN*EGGPGY
Trigger: GTAACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTT...GGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR TCA 90 bp AAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTAACAGACACAAGAACTaGGAAGGTGGCCCTGGTTAC +
Preference number: 2 (lower is better)
Translates to: KVALVTKNQRTLINIPKFNRHKN*EGGPGY
Trigger: GTAACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTT...AAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR TCA 90 bp ATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCAGCAACAGACACAAGAACTaGGAAGGTGGCCCTGGTTAC +
Preference number: 2 (lower is better)
Translates to: IPKFQARLKSVRRNEGPSNRHKN*EGGPGY
Trigger: GTAACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTT...GCTGGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR TCA 90 bp AAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAAGCCTATCTTCCTaGTTGCTTCTGCCTTCTCAG +
Preference number: 2 (lower is better)
Translates to: KVALVTKNQRTLINIPKFQSLSS*LLLPSQ
Trigger: CTGAGAAGGCAGAAGCAATCAGGAAGATAGGCTTTG...AAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476834.6
3UTR-3UTR CCA 90 bp ATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCAGCAGCTCAAGTCAACCCTaGCCAGACTCCAATAACAGA +
Preference number: 2 (lower is better)
Translates to: IPKFQARLKSVRRNEGPSSSSQP*PDSNNR
Trigger: TCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCT...GCTGGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278060.10
3UTR-3UTR CCA 90 bp GTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGACCCGTTCCAGTGGATaGTCTTCACAGGCTTCTCAA +
Preference number: 2 (lower is better)
Translates to: VTKNQRTLINIPKFQARLTRSSG*SSQASQ
Trigger: TTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGT...CAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR GCA 90 bp ATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTTCGTGGAGTAAAACGTaGGATGTGTGGCTTCCCCCG +
Preference number: 2 (lower is better)
Translates to: INIPKFQARLKSVRRNEGSWSKT*DVWLPP
Trigger: CGGGGGAAGCCACACATCGCACGTTTTACTCCACGA...ACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR CAA 90 bp GCCCACAGACTGAGGAGGCGGTCGGCCTCCCTCCATCCCGACAGCAGAGCCCCGGACCGCAGGACGCTCTaGGGCGCGGGGAGCCGTGGG +
Preference number: 3 (lower is better)
Translates to: AHRLRRRSASLHPDSRAPDRRTL*GAGSRG
Trigger: CCCACGGCTCCCCGCGCCCAAGAGCGTCCTGCGGTC...CGGGGCTCTGCTGTCGGGATGGAGGGAGGCCGACCGCCTCCTCAGTCTGTGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
3UTR TCA 72 bp TGGGCCTGGGCTGCTGCACCTGCGGGGCCCACAGACTaGGGAGGCGGTCGGCCTCCCTCCATCCCGACAGCA +
Preference number: 3 (lower is better)
Translates to: WAWAAAPAGPTD*GGGRPPSIPTA
Trigger: TGCTGTCGGGATGGAGGGAGGCCGACCGCCTCCTCAGTCTGTGGGCCCCGCAGGTGCAGCAGCCCAGGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
3UTR CCA 72 bp ACGGGGCGCTGTGCCAGCGAGACCGCAGGACGCTCTTaGGCGCGGGGAGCCGTGGGTTTCCTGTCACTCTCC +
Preference number: 3 (lower is better)
Translates to: TGRCASETAGRS*ARGAVGFLSLS
Trigger: GGAGAGTGACAGGAAACCCACGGCTCCCCGCGCCCAAGAGCGTCCTGCGGTCTCGCTGGCACAGCGCCCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476834.6
ENST00000483211.6
3UTR-3UTR CAA 90 bp AGCCGTGGGTTTCCTGTCACTCTCCGGAGCACTTGGGTGAGACACAGAAGTACTGACCGCAGGACGCTCTaGGGCGCGGGGAGCCGTGGG +
Preference number: 3 (lower is better)
Translates to: SRGFPVTLRSTWVRHRSTDRRTL*GAGSRG
Trigger: CCCACGGCTCCCCGCGCCCAAGAGCGTCCTGCGGTC...AGTACTTCTGTGTCTCACCCAAGTGCTCCGGAGAGTGACAGGAAACCCACGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476834.6
ENST00000483211.6
3UTR TCA 72 bp GGACAGACGCAAAGGCAGGCAGGACCACAAAGCCAATaGGCTTCCGGAACCAGGCGTCCTGTAGCTCAGGGG +
Preference number: 3 (lower is better)
Translates to: GQTQRQAGPQSQ*ASGTRRPVAQG
Trigger: CCCCTGAGCTACAGGACGCCTGGTTCCGGAAGCTCATTGGCTTTGTGGTCCTGCCTGCCTTTGCGTCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476834.6
3UTR GCA 72 bp GTGGACAGACCTAAGGGCACGGTGACGATGACATGGTaGGCCGGGAACCGGTCTCCATCCTCACACTCTACC +
Preference number: 3 (lower is better)
Translates to: VDRPKGTVTMTW*AGNRSPSSHST
Trigger: GGTAGAGTGTGAGGATGGAGACCGGTTCCCGGCGCACCATGTCATCGTCACCGTGCCCTTAGGTCTGTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483211.6
ENST00000529585.5
3UTR CCA 72 bp GACACTGGAAAGGTCTCCCCGGGAAAGGCTGCCTCCTaGAAGGACCCGTTCCAGTGGATGGTCTTCACAGGC +
Preference number: 3 (lower is better)
Translates to: DTGKVSPGKAAS*KDPFQWMVFTG
Trigger: GCCTGTGAAGACCATCCACTGGAACGGGTCCTTCCAGGAGGCAGCCTTTCCCGGGGAGACCTTTCCAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
3UTR CCA 72 bp CGGGAACCGGTCTCCATCCTCACACTCTACCGACACTaGAAAGGTCTCCCCGGGAAAGGCTGCCTCCTGGAA +
Preference number: 3 (lower is better)
Translates to: REPVSILTLYRH*KGLPGKGCLLE
Trigger: TTCCAGGAGGCAGCCTTTCCCGGGGAGACCTTTCCAGTGTCGGTAGAGTGTGAGGATGGAGACCGGTTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
3UTR-3UTR CAA 90 bp CACTTGGGTGAGACACAGAAGTACTTCTTCATCCGACAGAGTCTCCATGAACTCGACCGCAGGACGCTCTaGGGCGCGGGGAGCCGTGGG +
Preference number: 3 (lower is better)
Translates to: HLGETQKYFFIRQSLHELDRRTL*GAGSRG
Trigger: CCCACGGCTCCCCGCGCCCAAGAGCGTCCTGCGGTC...GAGTTCATGGAGACTCTGTCGGATGAAGAAGTACTTCTGTGTCTCACCCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476834.6
ENST00000483211.6
3UTR-3UTR CAA 90 bp CGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGCTGGGCGCCGGCGCCTCCAGGAAGATTTTGTaGTTGGTCCCAAAGCCTATC +
Preference number: 3 (lower is better)
Translates to: RAMCGFPRKQDLELGAGASRKIL*LVPKPI
Trigger: GATAGGCTTTGGGACCAACAACAAAATCTTCCTGGA...GGCGCCGGCGCCCAGCTCCAGATCCTGTTTGCGGGGGAAGCCACACATCGCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476834.6
3UTR GCA 72 bp CTCTACCGACACTGGAAAGGTCTCCCCGGGAAAGGCTaGCTCCTGGAAGGACCCGTTCCAGTGGATGGTCTT +
Preference number: 3 (lower is better)
Translates to: LYRHWKGLPGKG*LLEGPVPVDGL
Trigger: AAGACCATCCACTGGAACGGGTCCTTCCAGGAGGCAGCCTTTCCCGGGGAGACCTTTCCAGTGTCGGTAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
3UTR CCA 72 bp AACGTGGACAGACCTAAGGGCACGGTGACGATGACATaGTGCGCCGGGAACCGGTCTCCATCCTCACACTCT +
Preference number: 3 (lower is better)
Translates to: NVDRPKGTVTMT*CAGNRSPSSHS
Trigger: AGAGTGTGAGGATGGAGACCGGTTCCCGGCGCACCATGTCATCGTCACCGTGCCCTTAGGTCTGTCCACGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483211.6
ENST00000529585.5
3UTR GCA 72 bp CTGACAAGTTCTAAGGGCACGGTGACGATGACATGGTaGGCCGGGAACCGGTCTCCATCCTCACACTCTACC +
Preference number: 3 (lower is better)
Translates to: LTSSKGTVTMTW*AGNRSPSSHST
Trigger: GGTAGAGTGTGAGGATGGAGACCGGTTCCCGGCGCACCATGTCATCGTCACCGTGCCCTTAGAACTTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476834.6
3UTR CCA 72 bp ACACTGACAAGTTCTAAGGGCACGGTGACGATGACATaGTGCGCCGGGAACCGGTCTCCATCCTCACACTCT +
Preference number: 3 (lower is better)
Translates to: TLTSSKGTVTMT*CAGNRSPSSHS
Trigger: AGAGTGTGAGGATGGAGACCGGTTCCCGGCGCACCATGTCATCGTCACCGTGCCCTTAGAACTTGTCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476834.6
3UTR CCA 72 bp CCGGGAAAGGCTGCCTCCTGGAAGGACCCGTTCCAGTaGATGGTCTTCACAGGCTTCTCAAAAACTACAGTG +
Preference number: 3 (lower is better)
Translates to: PGKAASWKDPFQ*MVFTGFSKTTV
Trigger: CACTGTAGTTTTTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGTCCTTCCAGGAGGCAGCCTTTCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
3UTR TCA 72 bp GCCGTGGGTTTCCTGTCACTCTCCGGAGCACTTGGGTaGGACACAGAAGTACTTCTTCATCCGACAGAGTCT +
Preference number: 3 (lower is better)
Translates to: AVGFLSLSGALG*DTEVLLHPTES
Trigger: AGACTCTGTCGGATGAAGAAGTACTTCTGTGTCTCACCCAAGTGCTCCGGAGAGTGACAGGAAACCCACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476834.6
ENST00000483211.6
3UTR TCA 72 bp GTGGCTGTAACTTGCTTTATGTGTCCAGCATCTCCGTaGGCATCTGGTGTCTCAGCTCAAGTCAACCCTGGC +
Preference number: 3 (lower is better)
Translates to: VAVTCFMCPASP*ASGVSAQVNPG
Trigger: GCCAGGGTTGACTTGAGCTGAGACACCAGATGCTCACGGAGATGCTGGACACATAAAGCAAGTTACAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278060.10
3UTR TCA 72 bp GGAAGATTTTGTTGTTGGTCCCAAAGCCTATCTTCCTaGTTGCTTCTGCCTTCTCAGCCGGCAGGGGAGGGT +
Preference number: 3 (lower is better)
Translates to: GRFCCWSQSLSS*LLLPSQPAGEG
Trigger: ACCCTCCCCTGCCGGCTGAGAAGGCAGAAGCAATCAGGAAGATAGGCTTTGGGACCAACAACAAAATCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476834.6
3UTR TCA 72 bp CAGGATCTGGAGCTGTCACTCTCCGGAGCACTTGGGTaGGACACAGAAGTACTTCTTCATCCGACAGAGTCT +
Preference number: 3 (lower is better)
Translates to: QDLELSLSGALG*DTEVLLHPTES
Trigger: AGACTCTGTCGGATGAAGAAGTACTTCTGTGTCTCACCCAAGTGCTCCGGAGAGTGACAGCTCCAGATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529585.5
3UTR CCA 72 bp GAAAGGCTGCCTCCTGGAAGGACCCGTTCCAGTGGATaGTCTTCACAGGCTTCTCAAAAACTACAGTGTCCT +
Preference number: 3 (lower is better)
Translates to: ERLPPGRTRSSG*SSQASQKLQCP
Trigger: AGGACACTGTAGTTTTTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGTCCTTCCAGGAGGCAGCCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
3UTR TCA 72 bp CAACCCTGGCCAGACTCCAATAACAGACACAAGAACTaGGAAGGTGGCCCTGGTTACCAAAAACCAGAGGAC +
Preference number: 3 (lower is better)
Translates to: QPWPDSNNRHKN*EGGPGYQKPED
Trigger: GTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
3UTR GCA 72 bp GATTTTGTTGTTGGTCCCAAAGCCTATCTTCCTGATTaGTTCTGCCTTCTCAGCCGGCAGGGGAGGGTCAAA +
Preference number: 3 (lower is better)
Translates to: DFVVGPKAYLPD*FCLLSRQGRVK
Trigger: TTTGACCCTCCCCTGCCGGCTGAGAAGGCAGAAGCAATCAGGAAGATAGGCTTTGGGACCAACAACAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476834.6
3UTR CCA 72 bp CAAACAGGATCTGGAGCTGTCACTCTCCGGAGCACTTaGGTGAGACACAGAAGTACTTCTTCATCCGACAGA +
Preference number: 3 (lower is better)
Translates to: QTGSGAVTLRST*VRHRSTSSSDR
Trigger: TCTGTCGGATGAAGAAGTACTTCTGTGTCTCACCCAAGTGCTCCGGAGAGTGACAGCTCCAGATCCTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529585.5
3UTR TCA 72 bp GGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTaGAATCTGTCAGAAGAAATGAGGGTCCCAGCCTAC +
Preference number: 3 (lower is better)
Translates to: GPSLTSPNFKPD*NLSEEMRVPAY
Trigger: GTAGGCTGGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp GCCCACAGACTGAGGAGGCGGTCGGCCTCCCTCCATCCCGACAGCAGAGCCCCGCTGGGCTGCTGCACCTaGGGGGCCCACAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: AHRLRRRSASLHPDSRAPLGCCT*GAHRLR
Trigger: CCTCAGTCTGTGGGCCCCGCAGGTGCAGCAGCCCAG...CGGGGCTCTGCTGTCGGGATGGAGGGAGGCCGACCGCCTCCTCAGTCTGTGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp GGCCCACAGACTGAGGAGGCGGTCGGCCTCCCTCCATCCCGACAGCAGAGCCCCCTGGGCTGCTGCACCTaGGGGGCCCACAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: GPQTEEAVGLPPSRQQSPLGCCT*GAHRLR
Trigger: CCTCAGTCTGTGGGCCCCGCAGGTGCAGCAGCCCAG...GGGGCTCTGCTGTCGGGATGGAGGGAGGCCGACCGCCTCCTCAGTCTGTGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp CAGCGAGACCGCAGGACGCTCTTGGGCGCGGGGAGCCGTGGGTTTCCTGTCACTAGCCTGGGCCTGGGCTaGTGCACCTGCGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: QRDRRTLLGAGSRGFPVTSLGLG*CTCGAH
Trigger: GTGGGCCCCGCAGGTGCAGCAGCCCAGGCCCAGGCT...AGTGACAGGAAACCCACGGCTCCCCGCGCCCAAGAGCGTCCTGCGGTCTCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CCA 90 bp GAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGGCCCAGCTCCCCGGGAGGGCCCATaGATCCAGTGCGCGCCCACC +
Preference number: 4 (lower is better)
Translates to: EGPSLPPTRVEQSRLGPAPREGP*IQCAPT
Trigger: GGTGGGCGCGCACTGGATCCATGGGCCCTCCCGGGG...AGCTGGGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356306.9
ENST00000480071.2
CDS-3UTR CCA 90 bp GCCCACAGACTGAGGAGGCGGTCGGCCTCCCTCCATCCCGACAGCAGAGCCCCGGGCCCAGCTAGAGCCTaGGCCTGGGCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: AHRLRRRSASLHPDSRAPGPARA*AWAAAP
Trigger: AGGTGCAGCAGCCCAGGCCCAGGCTCTAGCTGGGCC...CGGGGCTCTGCTGTCGGGATGGAGGGAGGCCGACCGCCTCCTCAGTCTGTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp CGACGTGTCCTCCCACACCAGCTGGATCAGCTGGCAGTCTGGCTCCCAGAAGGGGCGGGGCCCACAGACTaGGGAGGCGGTCGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RRVLPHQLDQLAVWLPEGAGPTD*GGGRPP
Trigger: GGGAGGCCGACCGCCTCCTCAGTCTGTGGGCCCCGC...CCCTTCTGGGAGCCAGACTGCCAGCTGATCCAGCTGGTGTGGGAGGACACGTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476834.6
CDS-3UTR TCA 90 bp GAAATGAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGGCCGAGGGCAGGCCCACGTaGCCCCCGGTCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: EMRVPAYPRHGWNRVGWAEGRPT*PPVSTS
Trigger: GCTGGTGGAGACCGGGGGTCACGTGGGCCTGCCCTC...GGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTCATTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR GCA 90 bp GAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGGCCCAGCTGGTCGCCCCCAGTACTaGCCACGGCCACGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: EGPSLPPTRVEQSRLGPAGRPQY*PRPRSC
Trigger: ACAGCTACGTGGCCGTGGGCAGTACTGGGGGCGACC...AGCTGGGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CCA 90 bp GAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGGCCCAGCTAACAGGATCTGGAGCTaGGCGCCGGCGCCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: EGPSLPPTRVEQSRLGPANRIWS*APAPSA
Trigger: TGCAGACGGCGCCGGCGCCCAGCTCCAGATCCTGTT...AGCTGGGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR GCA 90 bp ACCGCAGGACGCTCTTGGGCGCGGGGAGCCGTGGGTTTCCTGTCACTCTCCGGACTCCCCGGGAAAGGCTaGCTCCTGGAAGGACCCGTT +
Preference number: 4 (lower is better)
Translates to: TAGRSWARGAVGFLSLSGLPGKG*LLEGPV
Trigger: AACGGGTCCTTCCAGGAGGCAGCCTTTCCCGGGGAG...TCCGGAGAGTGACAGGAAACCCACGGCTCCCCGCGCCCAAGAGCGTCCTGCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476834.6
ENST00000483211.6
CDS-3UTR GCA 90 bp CACAGACTGAGGAGGCGGTCGGCCTCCCTCCATCCCGACAGCAGAGCCCCGTGCGTGACGATGACATGGTaGGCCGGGAACCGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: HRLRRRSASLHPDSRAPCVTMTW*AGNRSP
Trigger: TGGAGACCGGTTCCCGGCGCACCATGTCATCGTCAC...GCACGGGGCTCTGCTGTCGGGATGGAGGGAGGCCGACCGCCTCCTCAGTCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp GAAATGAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGGCCCTGGGCTGCTGCACCTaGGGGGCCCACAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: EMRVPAYPRHGWNRVGWALGCCT*GAHRLR
Trigger: CCTCAGTCTGTGGGCCCCGCAGGTGCAGCAGCCCAG...GGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTCATTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp AATGAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGGCCCAATCTCCGCCACCAGCTaGAGGCTCACGCTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: NEGPSLPPTRVEQSRLGPISATS*RLTLAP
Trigger: CGGGGCCAGCGTGAGCCTCCAGCTGGTGGCGGAGAT...TGGGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTCATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR CCA 90 bp AACGTGGACAGACCTAAGGGCACGGTGACGATGACATGGTGCGCCGGGAACCGGCCCGCAAACAGGATCTaGAGCTGGGCGCCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: NVDRPKGTVTMTWCAGNRPANRI*SWAPAP
Trigger: CGGCGCCGGCGCCCAGCTCCAGATCCTGTTTGCGGG...CCGGTTCCCGGCGCACCATGTCATCGTCACCGTGCCCTTAGGTCTGTCCACGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483211.6
CDS-3UTR TCA 90 bp AGTAAAACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGCTGGGCGCGAGGGCAGGCCCACGTaGCCCCCGGTCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: SKTCDVWLPPQTGSGAGREGRPT*PPVSTS
Trigger: GCTGGTGGAGACCGGGGGTCACGTGGGCCTGCCCTC...GCGCCCAGCTCCAGATCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTTACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356306.9
CDS-3UTR GCA 90 bp GGTCGGCCTCCCTCCATCCCGACAGCAGAGCCCCGTGCGTCGTGGAGTAAAACGCTCCCCGGGAAAGGCTaGCTCCTGGAAGGACCCGTT +
Preference number: 4 (lower is better)
Translates to: GRPPSIPTAEPRASWSKTLPGKG*LLEGPV
Trigger: AACGGGTCCTTCCAGGAGGCAGCCTTTCCCGGGGAG...CGTTTTACTCCACGACGCACGGGGCTCTGCTGTCGGGATGGAGGGAGGCCGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp GAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGGCCCAGCTGTGACGATGACATGGTaGGCCGGGAACCGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: EGPSLPPTRVEQSRLGPAVTMTW*AGNRSP
Trigger: TGGAGACCGGTTCCCGGCGCACCATGTCATCGTCAC...AGCTGGGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGGCCCAGCTCAGCCGGCCACGTGCTaGCCAATCTCCTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: EGPSLPPTRVEQSRLGPAQPATC*PISFLR
Trigger: CCTCAAGAAGGAGATTGGCCAGCACGTGGCCGGCTG...AGCTGGGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356306.9
ENST00000480071.2
CDS-3UTR CCA 90 bp ACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGCTGGGCGCCGGCGCTCCTCCCACACCAGCTaGATCAGCTGGCAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: TCDVWLPPQTGSGAGRRRSSHTS*ISWQSG
Trigger: GCCAGACTGCCAGCTGATCCAGCTGGTGTGGGAGGA...GCGCCGGCGCCCAGCTCCAGATCCTGTTTGCGGGGGAAGCCACACATCGCACGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476834.6
CDS-3UTR CCA 90 bp CCGGGAACCGGTCTCCATCCTCACACTCTACCGACACTGGAAAGGTCTCCCCGGGGGCGCGGGGAGCCGTaGGTTTCCTGTCACTCTCCG +
Preference number: 4 (lower is better)
Translates to: PGTGLHPHTLPTLERSPRGRGEP*VSCHSP
Trigger: CGGAGAGTGACAGGAAACCCACGGCTCCCCGCGCCC...CCGGGGAGACCTTTCCAGTGTCGGTAGAGTGTGAGGATGGAGACCGGTTCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000476834.6
ENST00000483211.6
CDS-3UTR TCA 90 bp CCCCCTAGTGTACGGGGCGCTGTGCCAGCGAGACCGCAGGACGCTCTTGGGCGCCACAGCATTCCAGGTTaGAGAAGGAGTTCAGGACGG +
Preference number: 4 (lower is better)
Translates to: PPSVRGAVPARPQDALGRHSIPG*RRSSGR
Trigger: CCGTCCTGAACTCCTTCTTCAACCTGGAATGCTGTG...GCGCCCAAGAGCGTCCTGCGGTCTCGCTGGCACAGCGCCCCGTACACTAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356306.9
CDS-3UTR TCA 90 bp AGACTCAAGTCCGGCAATGAACCCACAGAGAACGTGGACAGACCTAAGGGCACGGCGGGGCCCACAGACTaGGGAGGCGGTCGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RLKSGNEPTENVDRPKGTAGPTD*GGGRPP
Trigger: GGGAGGCCGACCGCCTCCTCAGTCTGTGGGCCCCGC...CGTGCCCTTAGGTCTGTCCACGTTCTCTGTGGGTTCATTGCCGGACTTGAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp TCCAGCATCTCCGTGAGCATCTGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACAGCCTGGGCCTGGGCTaGTGCACCTGCGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: SSISVSIWCLSSSQPWPDSLGLG*CTCGAH
Trigger: GTGGGCCCCGCAGGTGCAGCAGCCCAGGCCCAGGCT...GTCTGGCCAGGGTTGACTTGAGCTGAGACACCAGATGCTCACGGAGATGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278060.10
CDS-3UTR CCA 90 bp AGAAGAAATGAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGCTGGAGGCTCACGCTaGCCCCGGAGCTGGCGTAGC +
Preference number: 4 (lower is better)
Translates to: RRNEGPSLPPTRVEQSRLAGGSR*PRSWRS
Trigger: GCTACGCCAGCTCCGGGGCCAGCGTGAGCCTCCAGC...CAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTCATTTCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR TCA 90 bp AATGAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGGCCCAGGCCAATCTCCTTCTTaGGGTACTCCCCGACGCTGG +
Preference number: 4 (lower is better)
Translates to: NEGPSLPPTRVEQSRLGPGQSPS*GTPRRW
Trigger: CCAGCGTCGGGGAGTACCTCAAGAAGGAGATTGGCC...TGGGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR TCA 90 bp GCCCACAGACTGAGGAGGCGGTCGGCCTCCCTCCATCCCGACAGCAGAGCCCCGAACAGACACAAGAACTaGGAAGGTGGCCCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: AHRLRRRSASLHPDSRAPNRHKN*EGGPGY
Trigger: GTAACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTT...CGGGGCTCTGCTGTCGGGATGGAGGGAGGCCGACCGCCTCCTCAGTCTGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp AGTAAAACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGCTGGGCGCGGGCACCGGGGTCTCTaGAGCGTGCAGGAACTCCCG +
Preference number: 4 (lower is better)
Translates to: SKTCDVWLPPQTGSGAGRGHRGL*SVQELP
Trigger: CGGGAGTTCCTGCACGCTGCAGAGACCCCGGTGCCC...GCGCCCAGCTCCAGATCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356306.9
CDS-3UTR GCA 90 bp AGAAATGAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGGCCTCCCCGGGAAAGGCTaGCTCCTGGAAGGACCCGTT +
Preference number: 4 (lower is better)
Translates to: RNEGPSLPPTRVEQSRLGLPGKG*LLEGPV
Trigger: AACGGGTCCTTCCAGGAGGCAGCCTTTCCCGGGGAG...GCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTCATTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp CGTGCGTCGTGGAGTAAAACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTTGCGGGAAGGCGGAGTaGCCGCAGAGCCTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: RASWSKTCDVWLPPQTGSCGKAE*PQSLCA
Trigger: GGCGCAGAGGCTCTGCGGCCACTCCGCCTTCCCGCA...AGATCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTTACTCCACGACGCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp AATGAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGGCCCACAGCCGGCCACGTGCTaGCCAATCTCCTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: NEGPSLPPTRVEQSRLGPQPATC*PISFLR
Trigger: CCTCAAGAAGGAGATTGGCCAGCACGTGGCCGGCTG...TGGGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR CCA 90 bp GTAGCTGTAGGACCCCCTAGTGTACGGGGCGCTGTGCCAGCGAGACCGCAGGACGAGCCCCGTGCGTCGTaGAGTAAAACGTGCGATGTG +
Preference number: 4 (lower is better)
Translates to: VAVGPPSVRGAVPARPQDEPRAS*SKTCDV
Trigger: CACATCGCACGTTTTACTCCACGACGCACGGGGCTC...GTCCTGCGGTCTCGCTGGCACAGCGCCCCGTACACTAGGGGGTCCTACAGCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CCA 90 bp ACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGCTGGGCGCCGGCGCAACCCACAGAGAACGTaGACAGACCTAAGGGCACGG +
Preference number: 4 (lower is better)
Translates to: TCDVWLPPQTGSGAGRRRNPQRT*TDLRAR
Trigger: CCGTGCCCTTAGGTCTGTCCACGTTCTCTGTGGGTT...GCGCCGGCGCCCAGCTCCAGATCCTGTTTGCGGGGGAAGCCACACATCGCACGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356306.9
ENST00000483211.6
CDS-3UTR TCA 90 bp CGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGCTGGGCGCCGGCGCCTCCGGAGCACTTGGGTaGGACACAGAAGTACTTCTT +
Preference number: 4 (lower is better)
Translates to: RAMCGFPRKQDLELGAGASGALG*DTEVLL
Trigger: AAGAAGTACTTCTGTGTCTCACCCAAGTGCTCCGGA...GGCGCCGGCGCCCAGCTCCAGATCCTGTTTGCGGGGGAAGCCACACATCGCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR TCA 90 bp GGACCCGTTCCAGTGGATGGTCTTCACAGGCTTCTCAAAAACTACAGTGTCCTCGCGGGGCCCACAGACTaGGGAGGCGGTCGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GPVPVDGLHRLLKNYSVLAGPTD*GGGRPP
Trigger: GGGAGGCCGACCGCCTCCTCAGTCTGTGGGCCCCGC...GAGGACACTGTAGTTTTTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp CGTGCGTCGTGGAGTAAAACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGCCCATGGATCCAGTaGGCGCCCACCTCCACCACG +
Preference number: 4 (lower is better)
Translates to: RASWSKTCDVWLPPQTGSGPWIQ*APTSTT
Trigger: CGTGGTGGAGGTGGGCGCGCACTGGATCCATGGGCC...AGATCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTTACTCCACGACGCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356306.9
ENST00000480071.2
CDS-3UTR GCA 90 bp GAAATGAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGGCCGGTCCATGCTGTGGGTaGCGCTCACACAGCATTCCA +
Preference number: 4 (lower is better)
Translates to: EMRVPAYPRHGWNRVGWAGPCCG*RSHSIP
Trigger: TGGAATGCTGTGTGAGCGGCACCCACAGCATGGACC...GGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTCATTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR GCA 90 bp GTGACGATGACATGGTGCGCCGGGAACCGGTCTCCATCCTCACACTCTACCGACCTCCCCGGGAAAGGCTaGCTCCTGGAAGGACCCGTT +
Preference number: 4 (lower is better)
Translates to: VTMTWCAGNRSPSSHSTDLPGKG*LLEGPV
Trigger: AACGGGTCCTTCCAGGAGGCAGCCTTTCCCGGGGAG...GTCGGTAGAGTGTGAGGATGGAGACCGGTTCCCGGCGCACCATGTCATCGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp AACGTGGACAGACCTAAGGGCACGGTGACGATGACATGGTGCGCCGGGAACCGGGTGACGATGACATGGTaGGCCGGGAACCGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: NVDRPKGTVTMTWCAGNRVTMTW*AGNRSP
Trigger: TGGAGACCGGTTCCCGGCGCACCATGTCATCGTCAC...CCGGTTCCCGGCGCACCATGTCATCGTCACCGTGCCCTTAGGTCTGTCCACGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp GAGAACGTGGACAGACGCAAAGGCAGGCAGGACCACAAAGCCAATGAGCTTCCGGTGTACGGGGCGCTGTaGCAGCGAGACCGCAGGACG +
Preference number: 4 (lower is better)
Translates to: ENVDRRKGRQDHKANELPVYGAL*QRDRRT
Trigger: CGTCCTGCGGTCTCGCTGGCACAGCGCCCCGTACAC...CGGAAGCTCATTGGCTTTGTGGTCCTGCCTGCCTTTGCGTCTGTCCACGTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476834.6
CDS-3UTR CCA 90 bp CGTGCGTCGTGGAGTAAAACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTATCTCCGCCACCAGCTaGAGGCTCACGCTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: RASWSKTCDVWLPPQTGSISATS*RLTLAP
Trigger: CGGGGCCAGCGTGAGCCTCCAGCTGGTGGCGGAGAT...AGATCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTTACTCCACGACGCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356306.9
ENST00000480071.2
CDS-3UTR CCA 90 bp GATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGCTGGGCGCCGGCGCCGTCTGAAGGACCCGTTCCAGTaGATGGTCTTCACAGGCTTC +
Preference number: 4 (lower is better)
Translates to: DVWLPPQTGSGAGRRRRLKDPFQ*MVFTGF
Trigger: GAAGCCTGTGAAGACCATCCACTGGAACGGGTCCTT...CAGACGGCGCCGGCGCCCAGCTCCAGATCCTGTTTGCGGGGGAAGCCACACATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CCA 90 bp AGAAATGAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGGCACGGTGACGATGACATaGTGCGCCGGGAACCGGTCT +
Preference number: 4 (lower is better)
Translates to: RNEGPSLPPTRVEQSRLGTVTMT*CAGNRS
Trigger: AGACCGGTTCCCGGCGCACCATGTCATCGTCACCGT...GCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTCATTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp ACTGGAAAGGTCTCCCCGGGAAAGGCTGCCTCCTGGAAGGACCCGTTCCAGTGGACGGTGACGATGACATaGTGCGCCGGGAACCGGTCT +
Preference number: 4 (lower is better)
Translates to: TGKVSPGKAASWKDPFQWTVTMT*CAGNRS
Trigger: AGACCGGTTCCCGGCGCACCATGTCATCGTCACCGT...CCACTGGAACGGGTCCTTCCAGGAGGCAGCCTTTCCCGGGGAGACCTTTCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp TCCAGCATCTCCGTGAGCATCTGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACGGGCGCGGGGAGCCGTaGGTTTCCTGTCACTCTCCG +
Preference number: 4 (lower is better)
Translates to: SSISVSIWCLSSSQPWPDGRGEP*VSCHSP
Trigger: CGGAGAGTGACAGGAAACCCACGGCTCCCCGCGCCC...GTCTGGCCAGGGTTGACTTGAGCTGAGACACCAGATGCTCACGGAGATGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278060.10
CDS-3UTR CCA 90 bp TGGATGGTCTTCACAGGCTTCTCAAAAACTACAGTGTCCTCCGGCAGGGCGGCCGGCCCAGCTAGAGCCTaGGCCTGGGCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: WMVFTGFSKTTVSSGRAAGPARA*AWAAAP
Trigger: AGGTGCAGCAGCCCAGGCCCAGGCTCTAGCTGGGCC...GGCCGCCCTGCCGGAGGACACTGTAGTTTTTGAGAAGCCTGTGAAGACCATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp CAGGTCGCCCCCAGTACTGCCCACGGCCACGTAGCTGTAGGACCCCCTAGTGTACCGACAGAGTCTCCATaGACTCAGACTCAAGTCCGG +
Preference number: 4 (lower is better)
Translates to: QVAPSTAHGHVAVGPPSVPTESP*TQTQVR
Trigger: CCGGACTTGAGTCTGAGTTCATGGAGACTCTGTCGG...TACACTAGGGGGTCCTACAGCTACGTGGCCGTGGGCAGTACTGGGGGCGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR TCA 90 bp ATCTGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGGCGGGGCCCACAGACTaGGGAGGCGGTCGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: IWCLSSSQPWPDSNNRHKAGPTD*GGGRPP
Trigger: GGGAGGCCGACCGCCTCCTCAGTCTGTGGGCCCCGC...CTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGACACCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR GCA 90 bp ACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCGGGCCTCCCCGACGCTaGCGGTCGACTCCATCGCGC +
Preference number: 4 (lower is better)
Translates to: TEKVALVTKNQRTLINIPGPPRR*RSTPSR
Trigger: GCGCGATGGAGTCGACCGGCAGCGTCGGGGAGGCCC...GGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp AGTAAAACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGCTGGGCGCCTCCCCGGGAAAGGCTaGCTCCTGGAAGGACCCGTT +
Preference number: 4 (lower is better)
Translates to: SKTCDVWLPPQTGSGAGRLPGKG*LLEGPV
Trigger: AACGGGTCCTTCCAGGAGGCAGCCTTTCCCGGGGAG...GCGCCCAGCTCCAGATCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR GCA 90 bp TCGTGGAGTAAAACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGCTGTGTACGGGGCGCTGTaGCAGCGAGACCGCAGGACG +
Preference number: 4 (lower is better)
Translates to: SWSKTCDVWLPPQTGSGAVYGAL*QRDRRT
Trigger: CGTCCTGCGGTCTCGCTGGCACAGCGCCCCGTACAC...AGCTCCAGATCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTTACTCCACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR GCA 90 bp CTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAGCCTGGGCCTGGGCTaGTGCACCTGCGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: LRRWPWLPKTRGPSLTSPSLGLG*CTCGAH
Trigger: GTGGGCCCCGCAGGTGCAGCAGCCCAGGCCCAGGCT...TGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp ACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAGCCTGGGCCTGGGCTaGTGCACCTGCGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: TEKVALVTKNQRTLINIPSLGLG*CTCGAH
Trigger: GTGGGCCCCGCAGGTGCAGCAGCCCAGGCCCAGGCT...GGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp CCTGGAAGGACCCGTTCCAGTGGATGGTCTTCACAGGCTTCTCAAAAACTACAGAGCCTGGGCCTGGGCTaGTGCACCTGCGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: PGRTRSSGWSSQASQKLQSLGLG*CTCGAH
Trigger: GTGGGCCCCGCAGGTGCAGCAGCCCAGGCCCAGGCT...CTGTAGTTTTTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGTCCTTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp CCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGGCCCTGGTTACCGCTGGAGGCTCACGCTaGCCCCGGAGCTGGCGTAGC +
Preference number: 4 (lower is better)
Translates to: PGQTPITDTRTEKVALVTAGGSR*PRSWRS
Trigger: GCTACGCCAGCTCCGGGGCCAGCGTGAGCCTCCAGC...GGTAACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp CGTCGTGGAGTAAAACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGAACAGGATCTGGAGCTaGGCGCCGGCGCCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: RRGVKRAMCGFPRKQDLENRIWS*APAPSA
Trigger: TGCAGACGGCGCCGGCGCCCAGCTCCAGATCCTGTT...CTCCAGATCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTTACTCCACGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CCA 90 bp AGAAGAAATGAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGTACCCCCGACACGGGTaGAACAGAGTAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RRNEGPSLPPTRVEQSRLYPRHG*NRVGWA
Trigger: GGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTA...CAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTCATTTCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp CCGGGAACCGGTCTCCATCCTCACACTCTACCGACACTGGAAAGGTCTCCCCGGCCCGCAAACAGGATCTaGAGCTGTCACTCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: PGTGLHPHTLPTLERSPRPANRI*SCHSPE
Trigger: CTCCGGAGAGTGACAGCTCCAGATCCTGTTTGCGGG...CCGGGGAGACCTTTCCAGTGTCGGTAGAGTGTGAGGATGGAGACCGGTTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529585.5
CDS-3UTR CCA 90 bp GAAATGAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGGCCAACCCACAGAGAACGTaGACAGACCTAAGGGCACGG +
Preference number: 4 (lower is better)
Translates to: EMRVPAYPRHGWNRVGWANPQRT*TDLRAR
Trigger: CCGTGCCCTTAGGTCTGTCCACGTTCTCTGTGGGTT...GGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTCATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356306.9
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp GTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGGAGGGCAGGCCCACGTaGCCCCCGGTCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: VSAQVNPGQTPITDTRTEEGRPT*PPVSTS
Trigger: GCTGGTGGAGACCGGGGGTCACGTGGGCCTGCCCTC...CTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR GCA 90 bp GAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAAGGGCCTCCCCGACGCTaGCGGTCGACTCCATCGCGC +
Preference number: 4 (lower is better)
Translates to: EKVALVTKNQRTLINIPKGPPRR*RSTPSR
Trigger: GCGCGATGGAGTCGACCGGCAGCGTCGGGGAGGCCC...TTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp CGACGTGTCCTCCCACACCAGCTGGATCAGCTGGCAGTCTGGCTCCCAGAAGGGGCCTATCTTCCTGATTaGTTCTGCCTTCTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: RRVLPHQLDQLAVWLPEGAYLPD*FCLLSR
Trigger: CCGGCTGAGAAGGCAGAAGCAATCAGGAAGATAGGC...CCCTTCTGGGAGCCAGACTGCCAGCTGATCCAGCTGGTGTGGGAGGACACGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476834.6
CDS-3UTR GCA 90 bp TGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACAGCCTGGGCCTGGGCTaGTGCACCTGCGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: WCLSSSQPWPDSNNRHKNSLGLG*CTCGAH
Trigger: GTGGGCCCCGCAGGTGCAGCAGCCCAGGCCCAGGCT...GTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp ACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCTGCGGGAAGGCGGAGTaGCCGCAGAGCCTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: TEKVALVTKNQRTLINIPCGKAE*PQSLCA
Trigger: GGCGCAGAGGCTCTGCGGCCACTCCGCCTTCCCGCA...GGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp ATCTGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGCCCCGGGAGGGCCCATaGATCCAGTGCGCGCCCACC +
Preference number: 4 (lower is better)
Translates to: IWCLSSSQPWPDSNNRHKPREGP*IQCAPT
Trigger: GGTGGGCGCGCACTGGATCCATGGGCCCTCCCGGGG...CTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGACACCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp GCGACGTGTCCTCCCACACCAGCTGGATCAGCTGGCAGTCTGGCTCCCAGAAGGACACTCTACCGACACTaGAAAGGTCTCCCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: ATCPPTPAGSAGSLAPRRTLYRH*KGLPGK
Trigger: TTTCCCGGGGAGACCTTTCCAGTGTCGGTAGAGTGT...CCTTCTGGGAGCCAGACTGCCAGCTGATCCAGCTGGTGTGGGAGGACACGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476834.6
CDS-3UTR CCA 90 bp CGCAAAGGCAGGCAGGACCACAAAGCCAATGAGCTTCCGGAACCAGGCGTCCTGACCAGCTGGATCAGCTaGCAGTCTGGCTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RKGRQDHKANELPEPGVLTSWIS*QSGSQK
Trigger: CTTCTGGGAGCCAGACTGCCAGCTGATCCAGCTGGT...CAGGACGCCTGGTTCCGGAAGCTCATTGGCTTTGTGGTCCTGCCTGCCTTTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476834.6
CDS-3UTR CCA 90 bp CCGGGAACCGGTCTCCATCCTCACACTCTACCGACACTGGAAAGGTCTCCCCGGAACCCACAGAGAACGTaGACAGACGCAAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PGTGLHPHTLPTLERSPRNPQRT*TDAKAG
Trigger: GCCTGCCTTTGCGTCTGTCCACGTTCTCTGTGGGTT...CCGGGGAGACCTTTCCAGTGTCGGTAGAGTGTGAGGATGGAGACCGGTTCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476834.6
CDS-3UTR CCA 90 bp GGACCCGTTCCAGTGGATGGTCTTCACAGGCTTCTCAAAAACTACAGTGTCCTCACCGCAGGACGCTCTTaGGCGCGGGGAGCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: GPVPVDGLHRLLKNYSVLTAGRS*ARGAVG
Trigger: ACCCACGGCTCCCCGCGCCCAAGAGCGTCCTGCGGT...GAGGACACTGTAGTTTTTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CCA 90 bp CTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCACCCGCAAACAGGATCTaGAGCTGGGCGCCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: LRRWPWLPKTRGPSLTSPPANRI*SWAPAP
Trigger: CGGCGCCGGCGCCCAGCTCCAGATCCTGTTTGCGGG...TGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CCA 90 bp AAACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGCTGGGCGCCGGCAAAACGTGCGATGTGTaGCTTCCCCCGCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: KRAMCGFPRKQDLELGAGKTCDV*LPPQTG
Trigger: TCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTT...GCCGGCGCCCAGCTCCAGATCCTGTTTGCGGGGGAAGCCACACATCGCACGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CCA 90 bp AATGAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGGCCCAAAAACGTGCGATGTGTaGCTTCCCCCGCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: NEGPSLPPTRVEQSRLGPKTCDV*LPPQTG
Trigger: TCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTT...TGGGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp ACCGACACTGGAAAGGTCTCCCCGGGAAAGGCTGCCTCCTGGAAGGACCCGTTCACTCAAGTCCGGCAATaGACCCACAGAGAACGTGGA +
Preference number: 4 (lower is better)
Translates to: TDTGKVSPGKAASWKDPFTQVRQ*THRERG
Trigger: TCCACGTTCTCTGTGGGTTCATTGCCGGACTTGAGT...GAACGGGTCCTTCCAGGAGGCAGCCTTTCCCGGGGAGACCTTTCCAGTGTCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp TGCGCCGGGAACCGGTCTCCATCCTCACACTCTACCGACACTGGAAAGGTCTCCCCGACAGAGTCTCCATaGACTCAGACTCAAGTCCGG +
Preference number: 4 (lower is better)
Translates to: CAGNRSPSSHSTDTGKVSPTESP*TQTQVR
Trigger: CCGGACTTGAGTCTGAGTTCATGGAGACTCTGTCGG...GGAGACCTTTCCAGTGTCGGTAGAGTGTGAGGATGGAGACCGGTTCCCGGCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp AAACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGCTGGGCGCCGGCTCCGGAGCACTTGGGTaGGACACAGAAGTACTTCTT +
Preference number: 4 (lower is better)
Translates to: KRAMCGFPRKQDLELGAGSGALG*DTEVLL
Trigger: AAGAAGTACTTCTGTGTCTCACCCAAGTGCTCCGGA...GCCGGCGCCCAGCTCCAGATCCTGTTTGCGGGGGAAGCCACACATCGCACGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR TCA 90 bp GAAATGAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGGCCTCCGGAGCACTTGGGTaGGACACAGAAGTACTTCTT +
Preference number: 4 (lower is better)
Translates to: EMRVPAYPRHGWNRVGWASGALG*DTEVLL
Trigger: AAGAAGTACTTCTGTGTCTCACCCAAGTGCTCCGGA...GGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTCATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp AAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTGCGGGGCCCACAGACTaGGGAGGCGGTCGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: KVALVTKNQRTLINIPKFAGPTD*GGGRPP
Trigger: GGGAGGCCGACCGCCTCCTCAGTCTGTGGGCCCCGC...AAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp CCCAGTACTGCCCACGGCCACGTAGCTGTAGGACCCCCTAGTGTACGGGGCGCTAACTCCAAACGTGAATaGACAAAGCCACTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PSTAHGHVAVGPPSVRGANSKRE*TKPLEG
Trigger: TCCCTCCAGTGGCTTTGTTCATTCACGTTTGGAGTT...AGCGCCCCGTACACTAGGGGGTCCTACAGCTACGTGGCCGTGGGCAGTACTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476834.6
CDS-3UTR GCA 90 bp GCATCTGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAGGCCCATGGATCCAGTaGGCGCCCACCTCCACCACG +
Preference number: 4 (lower is better)
Translates to: ASGVSAQVNPGQTPITDTGPWIQ*APTSTT
Trigger: CGTGGTGGAGGTGGGCGCGCACTGGATCCATGGGCC...TGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGACACCAGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR GCA 90 bp ACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCGGCCCATGGATCCAGTaGGCGCCCACCTCCACCACG +
Preference number: 4 (lower is better)
Translates to: TEKVALVTKNQRTLINIPGPWIQ*APTSTT
Trigger: CGTGGTGGAGGTGGGCGCGCACTGGATCCATGGGCC...GGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000480071.2
CDS-3UTR GCA 90 bp GCTTTATGTGTCCAGCATCTCCGTGAGCATCTGGTGTCTCAGCTCAAGTCAACCGGGCACCGGGGTCTCTaGAGCGTGCAGGAACTCCCG +
Preference number: 4 (lower is better)
Translates to: ALCVQHLREHLVSQLKSTGHRGL*SVQELP
Trigger: CGGGAGTTCCTGCACGCTGCAGAGACCCCGGTGCCC...GGTTGACTTGAGCTGAGACACCAGATGCTCACGGAGATGCTGGACACATAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278060.10
CDS-3UTR GCA 90 bp AACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGGCCCTGGTTGGGCACCGGGGTCTCTaGAGCGTGCAGGAACTCCCG +
Preference number: 4 (lower is better)
Translates to: NPGQTPITDTRTEKVALVGHRGL*SVQELP
Trigger: CGGGAGTTCCTGCACGCTGCAGAGACCCCGGTGCCC...AACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR GCA 90 bp GACCCGTTCCAGTGGATGGTCTTCACAGGCTTCTCAAAAACTACAGTGTCCTCCGTGTACGGGGCGCTGTaGCAGCGAGACCGCAGGACG +
Preference number: 4 (lower is better)
Translates to: DPFQWMVFTGFSKTTVSSVYGAL*QRDRRT
Trigger: CGTCCTGCGGTCTCGCTGGCACAGCGCCCCGTACAC...GGAGGACACTGTAGTTTTTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476834.6
ENST00000483211.6
CDS-3UTR GCA 90 bp TCTCCGGAGCACTTGGGTGAGACACAGAAGTACTTCTTCATCCGACAGAGTCTCCTGGGCTGCTGCACCTaGGGGGCCCACAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: SPEHLGETQKYFFIRQSLLGCCT*GAHRLR
Trigger: CCTCAGTCTGTGGGCCCCGCAGGTGCAGCAGCCCAG...GAGACTCTGTCGGATGAAGAAGTACTTCTGTGTCTCACCCAAGTGCTCCGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp TGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGCGGGAAGGCGGAGTaGCCGCAGAGCCTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: WCLSSSQPWPDSNNRHKNCGKAE*PQSLCA
Trigger: GGCGCAGAGGCTCTGCGGCCACTCCGCCTTCCCGCA...GTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGACACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp ATCTGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGTGCGGGAAGGCGGAGTaGCCGCAGAGCCTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: IWCLSSSQPWPDSNNRHKCGKAE*PQSLCA
Trigger: GGCGCAGAGGCTCTGCGGCCACTCCGCCTTCCCGCA...CTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGACACCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp GTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGCGCTGGCCCCGGAGCTaGCGTAGCTCACGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: VSAQVNPGQTPITDTRTERWPRS*RSSRRA
Trigger: TGCCCTCCGTGAGCTACGCCAGCTCCGGGGCCAGCG...CTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp GCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGGCTGGAGGCTCACGCTaGCCCCGGAGCTGGCGTAGC +
Preference number: 4 (lower is better)
Translates to: AQVNPGQTPITDTRTEKVAGGSR*PRSWRS
Trigger: GCTACGCCAGCTCCGGGGCCAGCGTGAGCCTCCAGC...CACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp ACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCATCTCCGCCACCAGCTaGAGGCTCACGCTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: TEKVALVTKNQRTLINIPISATS*RLTLAP
Trigger: CGGGGCCAGCGTGAGCCTCCAGCTGGTGGCGGAGAT...GGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000480071.2
CDS-3UTR CCA 90 bp CGTCGTGGAGTAAAACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGGGAAAGGCTGCCTCCTaGAAGGACCCGTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RRGVKRAMCGFPRKQDLEGKAAS*KDPFQW
Trigger: CCACTGGAACGGGTCCTTCCAGGAGGCAGCCTTTCC...CTCCAGATCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTTACTCCACGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp CGTGCGTCGTGGAGTAAAACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTACGGTGACGATGACATaGTGCGCCGGGAACCGGTCT +
Preference number: 4 (lower is better)
Translates to: RASWSKTCDVWLPPQTGSTVTMT*CAGNRS
Trigger: AGACCGGTTCCCGGCGCACCATGTCATCGTCACCGT...AGATCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTTACTCCACGACGCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAAACCGCAGGACGCTCTTaGGCGCGGGGAGCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: EKVALVTKNQRTLINIPKTAGRS*ARGAVG
Trigger: ACCCACGGCTCCCCGCGCCCAAGAGCGTCCTGCGGT...TTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CCA 90 bp TCTTCATCCGACAGAGTCTCCATGAACTCAGACTCAAGTCCGGCAATGAACCCACCCGCAAACAGGATCTaGAGCTGGGCGCCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: SSSDRVSMNSDSSPAMNPPANRI*SWAPAP
Trigger: CGGCGCCGGCGCCCAGCTCCAGATCCTGTTTGCGGG...TGGGTTCATTGCCGGACTTGAGTCTGAGTTCATGGAGACTCTGTCGGATGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CCA 90 bp ACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCGGCCCAGCTAGAGCCTaGGCCTGGGCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: TEKVALVTKNQRTLINIPGPARA*AWAAAP
Trigger: AGGTGCAGCAGCCCAGGCCCAGGCTCTAGCTGGGCC...GGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp AGACTCAAGTCCGGCAATGAACCCACAGAGAACGTGGACAGACCTAAGGGCACGTACCCCCGACACGGGTaGAACAGAGTAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RLKSGNEPTENVDRPKGTYPRHG*NRVGWA
Trigger: GGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTA...CGTGCCCTTAGGTCTGTCCACGTTCTCTGTGGGTTCATTGCCGGACTTGAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GAAATGAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGGCCCTGAGAAGGTGGCCCTaGTTACCAAAAACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: EMRVPAYPRHGWNRVGWALRRWP*LPKTRG
Trigger: TCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAG...GGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTCATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp CAGGTCGCCCCCAGTACTGCCCACGGCCACGTAGCTGTAGGACCCCCTAGTGTACTGAGAAGGTGGCCCTaGTTACCAAAAACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: QVAPSTAHGHVAVGPPSVLRRWP*LPKTRG
Trigger: TCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAG...TACACTAGGGGGTCCTACAGCTACGTGGCCGTGGGCAGTACTGGGGGCGACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR TCA 90 bp AACGTGGACAGACCTAAGGGCACGGTGACGATGACATGGTGCGCCGGGAACCGGTCCGGAGCACTTGGGTaGGACACAGAAGTACTTCTT +
Preference number: 4 (lower is better)
Translates to: NVDRPKGTVTMTWCAGNRSGALG*DTEVLL
Trigger: AAGAAGTACTTCTGTGTCTCACCCAAGTGCTCCGGA...CCGGTTCCCGGCGCACCATGTCATCGTCACCGTGCCCTTAGGTCTGTCCACGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp ACTGGAAAGGTCTCCCCGGGAAAGGCTGCCTCCTGGAAGGACCCGTTCCAGTGGAACAGACACAAGAACTaGGAAGGTGGCCCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: TGKVSPGKAASWKDPFQWNRHKN*EGGPGY
Trigger: GTAACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTT...CCACTGGAACGGGTCCTTCCAGGAGGCAGCCTTTCCCGGGGAGACCTTTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp AACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGGCCCTGGTTGGGGTCTCTGCAGCGTaGAGGAACTCCCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: NPGQTPITDTRTEKVALVGVSAA*RNSRVW
Trigger: CCAGACCCGGGAGTTCCTGCACGCTGCAGAGACCCC...AACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR GCA 90 bp GAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAAGGGCACCGGGGTCTCTaGAGCGTGCAGGAACTCCCG +
Preference number: 4 (lower is better)
Translates to: EKVALVTKNQRTLINIPKGHRGL*SVQELP
Trigger: CGGGAGTTCCTGCACGCTGCAGAGACCCCGGTGCCC...TTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000480071.2
CDS-3UTR GCA 90 bp CTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAGGTCGCCCCCAGTACTaGCCACGGCCACGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: LRRWPWLPKTRGPSLTSPGRPQY*PRPRSC
Trigger: ACAGCTACGTGGCCGTGGGCAGTACTGGGGGCGACC...TGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR GCA 90 bp TGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACCTGGGCTGCTGCACCTaGGGGGCCCACAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: WCLSSSQPWPDSNNRHKNLGCCT*GAHRLR
Trigger: CCTCAGTCTGTGGGCCCCGCAGGTGCAGCAGCCCAG...GTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGACACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp AAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCCCCGGGAGGGCCCATaGATCCAGTGCGCGCCCACC +
Preference number: 4 (lower is better)
Translates to: KVALVTKNQRTLINIPKFPREGP*IQCAPT
Trigger: GGTGGGCGCGCACTGGATCCATGGGCCCTCCCGGGG...AAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR CCA 90 bp GCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCCGCTGGCCCCGGAGCTaGCGTAGCTCACGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: ALVTKNQRTLINIPKFQARWPRS*RSSRRA
Trigger: TGCCCTCCGTGAGCTACGCCAGCTCCGGGGCCAGCG...GGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR CCA 90 bp ATCTGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGATCTCCGCCACCAGCTaGAGGCTCACGCTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: IWCLSSSQPWPDSNNRHKISATS*RLTLAP
Trigger: CGGGGCCAGCGTGAGCCTCCAGCTGGTGGCGGAGAT...CTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGACACCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp AGAAATGAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGGCACCCGTTCCAGTGGATaGTCTTCACAGGCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: RNEGPSLPPTRVEQSRLGTRSSG*SSQASQ
Trigger: TTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGT...GCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTCATTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GTGACGATGACATGGTGCGCCGGGAACCGGTCTCCATCCTCACACTCTACCGACAAGGACCCGTTCCAGTaGATGGTCTTCACAGGCTTC +
Preference number: 4 (lower is better)
Translates to: VTMTWCAGNRSPSSHSTDKDPFQ*MVFTGF
Trigger: GAAGCCTGTGAAGACCATCCACTGGAACGGGTCCTT...GTCGGTAGAGTGTGAGGATGGAGACCGGTTCCCGGCGCACCATGTCATCGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp AGACTCAAGTCCGGCAATGAACCCACAGAGAACGTGGACAGACCTAAGGGCACGGGAAAGGCTGCCTCCTaGAAGGACCCGTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RLKSGNEPTENVDRPKGTGKAAS*KDPFQW
Trigger: CCACTGGAACGGGTCCTTCCAGGAGGCAGCCTTTCC...CGTGCCCTTAGGTCTGTCCACGTTCTCTGTGGGTTCATTGCCGGACTTGAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAAGGGCGCGGGGAGCCGTaGGTTTCCTGTCACTCTCCG +
Preference number: 4 (lower is better)
Translates to: EKVALVTKNQRTLINIPKGRGEP*VSCHSP
Trigger: CGGAGAGTGACAGGAAACCCACGGCTCCCCGCGCCC...TTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CCA 90 bp TTCATCCGACAGAGTCTCCATGAACTCAGACTCAAGTCCGGCAATGAACCCACAGGCCCAGCTAGAGCCTaGGCCTGGGCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: FIRQSLHELRLKSGNEPTGPARA*AWAAAP
Trigger: AGGTGCAGCAGCCCAGGCCCAGGCTCTAGCTGGGCC...TGTGGGTTCATTGCCGGACTTGAGTCTGAGTTCATGGAGACTCTGTCGGATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp AACGTGGACAGACCTAAGGGCACGGTGACGATGACATGGTGCGCCGGGAACCGGCTGAGAAGGTGGCCCTaGTTACCAAAAACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: NVDRPKGTVTMTWCAGNRLRRWP*LPKTRG
Trigger: TCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAG...CCGGTTCCCGGCGCACCATGTCATCGTCACCGTGCCCTTAGGTCTGTCCACGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp AACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCGGGCCTCCCCGACGCTaGCGGTCGACTCCATCGCGC +
Preference number: 4 (lower is better)
Translates to: NQRTLINIPKFQARLKSVGPPRR*RSTPSR
Trigger: GCGCGATGGAGTCGACCGGCAGCGTCGGGGAGGCCC...GACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp CAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAGGGCCTCCCCGACGCTaGCGGTCGACTCCATCGCGC +
Preference number: 4 (lower is better)
Translates to: QRTLINIPKFQARLKSVRGPPRR*RSTPSR
Trigger: GCGCGATGGAGTCGACCGGCAGCGTCGGGGAGGCCC...TCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp AGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATGGCCCATGGATCCAGTaGGCGCCCACCTCCACCACG +
Preference number: 4 (lower is better)
Translates to: RRWPWLPKTRGPSLTSPNGPWIQ*APTSTT
Trigger: CGTGGTGGAGGTGGGCGCGCACTGGATCCATGGGCC...ATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000480071.2
CDS-3UTR GCA 90 bp GAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAAGGGGTCTCTGCAGCGTaGAGGAACTCCCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: EKVALVTKNQRTLINIPKGVSAA*RNSRVW
Trigger: CCAGACCCGGGAGTTCCTGCACGCTGCAGAGACCCC...TTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000480071.2
CDS-3UTR GCA 90 bp GAACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCGGGGTCTCTGCAGCGTaGAGGAACTCCCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: ELRRWPWLPKTRGPSLTSGVSAA*RNSRVW
Trigger: CCAGACCCGGGAGTTCCTGCACGCTGCAGAGACCCC...GGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000480071.2
CDS-3UTR GCA 90 bp GCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGGGGCCACCAGGTCCATaGTGTGGGTGCCGCTCACAC +
Preference number: 4 (lower is better)
Translates to: AQVNPGQTPITDTRTEKVGPPGP*CGCRSH
Trigger: GTGTGAGCGGCACCCACAGCATGGACCTGGTGGCCC...CACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR GCA 90 bp GAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAAGGGCCACCAGGTCCATaGTGTGGGTGCCGCTCACAC +
Preference number: 4 (lower is better)
Translates to: EKVALVTKNQRTLINIPKGPPGP*CGCRSH
Trigger: GTGTGAGCGGCACCCACAGCATGGACCTGGTGGCCC...TTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000480071.2
CDS-3UTR GCA 90 bp CCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGGCCCTGGTTACCGTGACGATGACATGGTaGGCCGGGAACCGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PGQTPITDTRTEKVALVTVTMTW*AGNRSP
Trigger: TGGAGACCGGTTCCCGGCGCACCATGTCATCGTCAC...GGTAACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR GCA 90 bp AACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCAGCCTGGGCCTGGGCTaGTGCACCTGCGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: NIPKFQARLKSVRRNEGPSLGLG*CTCGAH
Trigger: GTGGGCCCCGCAGGTGCAGCAGCCCAGGCCCAGGCT...GGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp CCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCAGCCTATGCGGGAAGGCGGAGTaGCCGCAGAGCCTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: PKFQARLKSVRRNEGPSLCGKAE*PQSLCA
Trigger: GGCGCAGAGGCTCTGCGGCCACTCCGCCTTCCCGCA...TAGGCTGGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp AACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCCCCCGGGAGGGCCCATaGATCCAGTGCGCGCCCACC +
Preference number: 4 (lower is better)
Translates to: NIPKFQARLKSVRRNEGPPREGP*IQCAPT
Trigger: GGTGGGCGCGCACTGGATCCATGGGCCCTCCCGGGG...GGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR CCA 90 bp CCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGGCCCTGGTTACCTACTCAGCAGCCAGCTaGAAGACGGGGTTACCCCGG +
Preference number: 4 (lower is better)
Translates to: PGQTPITDTRTEKVALVTYSAAS*KTGLPR
Trigger: CCGGGGTAACCCCGTCTTCCAGCTGGCTGCTGAGTA...GGTAACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp CCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGGCCCTGGTTACCCAGCCGGCCACGTGCTaGCCAATCTCCTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PGQTPITDTRTEKVALVTQPATC*PISFLR
Trigger: CCTCAAGAAGGAGATTGGCCAGCACGTGGCCGGCTG...GGTAACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp GTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGGCCCTGACGGTGACGATGACATaGTGCGCCGGGAACCGGTCT +
Preference number: 4 (lower is better)
Translates to: VNPGQTPITDTRTEKVALTVTMT*CAGNRS
Trigger: AGACCGGTTCCCGGCGCACCATGTCATCGTCACCGT...CAGGGCCACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp CTGCCTCCTGGAAGGACCCGTTCCAGTGGATGGTCTTCACAGGCTTCTCAAAAAACGGTGACGATGACATaGTGCGCCGGGAACCGGTCT +
Preference number: 4 (lower is better)
Translates to: LPPGRTRSSGWSSQASQKTVTMT*CAGNRS
Trigger: AGACCGGTTCCCGGCGCACCATGTCATCGTCACCGT...TTTTTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGTCCTTCCAGGAGGCAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGGCCCTGGATCAGCTGGCAGTCTaGCTCCCAGAAGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VNPGQTPITDTRTEKVALDQLAV*LPEGLL
Trigger: GAGGAGCCCTTCTGGGAGCCAGACTGCCAGCTGATC...CAGGGCCACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp TCCCCGGGAAAGGCTGCCTCCTGGAAGGACCCGTTCCAGTGGATGGTCTTCACAACTCTCCGGAGCACTTaGGTGAGACACAGAAGTACT +
Preference number: 4 (lower is better)
Translates to: SPGKAASWKDPFQWMVFTTLRST*VRHRST
Trigger: AGTACTTCTGTGTCTCACCCAAGTGCTCCGGAGAGT...TGTGAAGACCATCCACTGGAACGGGTCCTTCCAGGAGGCAGCCTTTCCCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp CCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCAGCCTAACCGCAGGACGCTCTTaGGCGCGGGGAGCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: PKFQARLKSVRRNEGPSLTAGRS*ARGAVG
Trigger: ACCCACGGCTCCCCGCGCCCAAGAGCGTCCTGCGGT...TAGGCTGGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CCA 90 bp CCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAACCGCAGGACGCTCTTaGGCGCGGGGAGCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: PWLPKTRGPSLTSPNFKPTAGRS*ARGAVG
Trigger: ACCCACGGCTCCCCGCGCCCAAGAGCGTCCTGCGGT...TGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CCA 90 bp CCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCACCCGCAAACAGGATCTaGAGCTGGGCGCCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: PWLPKTRGPSLTSPNFKPPANRI*SWAPAP
Trigger: CGGCGCCGGCGCCCAGCTCCAGATCCTGTTTGCGGG...TGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
3UTR CAA 72 bp GGGGAGCCGTGGGTTTCCTGTCACTCTCCGGAGCACTaGGGTGAGACACAGAAGTACTTCTTCATCCGACAG +
Preference number: 4 (lower is better)
Translates to: GEPWVSCHSPEH*GETQKYFFIRQ
Trigger: CTGTCGGATGAAGAAGTACTTCTGTGTCTCACCCAAGTGCTCCGGAGAGTGACAGGAAACCCACGGCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476834.6
ENST00000483211.6
CDS-3UTR TCA 90 bp TGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACCAGTCCGAGGGCTTCTaGGTAGCCGGGAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: WCLSSSQPWPDSNNRHKNQSEGF*VAGRSG
Trigger: TCCAGACCTCCCGGCTACTCAGAAGCCCTCGGACTG...GTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGACACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR TCA 90 bp GCATCTGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAGGCCAATCTCCTTCTTaGGGTACTCCCCGACGCTGG +
Preference number: 4 (lower is better)
Translates to: ASGVSAQVNPGQTPITDTGQSPS*GTPRRW
Trigger: CCAGCGTCGGGGAGTACCTCAAGAAGGAGATTGGCC...TGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGACACCAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR TCA 90 bp CGTGCGTCGTGGAGTAAAACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTACTCAAGTCCGGCAATaGACCCACAGAGAACGTGGA +
Preference number: 4 (lower is better)
Translates to: RASWSKTCDVWLPPQTGSTQVRQ*THRERG
Trigger: TCCACGTTCTCTGTGGGTTCATTGCCGGACTTGAGT...AGATCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTTACTCCACGACGCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp TGGATGGTCTTCACAGGCTTCTCAAAAACTACAGTGTCCTCCGGCAGGGCGGCCACTCAAGTCCGGCAATaGACCCACAGAGAACGTGGA +
Preference number: 4 (lower is better)
Translates to: WMVFTGFSKTTVSSGRAATQVRQ*THRERG
Trigger: TCCACGTTCTCTGTGGGTTCATTGCCGGACTTGAGT...GGCCGCCCTGCCGGAGGACACTGTAGTTTTTGAGAAGCCTGTGAAGACCATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp GCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGCTCCCCGGGAAAGGCTaGCTCCTGGAAGGACCCGTT +
Preference number: 4 (lower is better)
Translates to: AQVNPGQTPITDTRTEKVLPGKG*LLEGPV
Trigger: AACGGGTCCTTCCAGGAGGCAGCCTTTCCCGGGGAG...CACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR GCA 90 bp CCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCAGCCTAGTGTACGGGGCGCTGTaGCAGCGAGACCGCAGGACG +
Preference number: 4 (lower is better)
Translates to: PKFQARLKSVRRNEGPSLVYGAL*QRDRRT
Trigger: CGTCCTGCGGTCTCGCTGGCACAGCGCCCCGTACAC...TAGGCTGGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR GCA 90 bp AGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATGGTCGCCCCCAGTACTaGCCACGGCCACGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: RRWPWLPKTRGPSLTSPNGRPQY*PRPRSC
Trigger: ACAGCTACGTGGCCGTGGGCAGTACTGGGGGCGACC...ATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CCA 90 bp GTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGCGCTGGCCCCGGAGCTaGCGTAGCTCACGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: VTKNQRTLINIPKFQARLRWPRS*RSSRRA
Trigger: TGCCCTCCGTGAGCTACGCCAGCTCCGGGGCCAGCG...CAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR CCA 90 bp GCATCTGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACACAGCCGGCCACGTGCTaGCCAATCTCCTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: ASGVSAQVNPGQTPITDTQPATC*PISFLR
Trigger: CCTCAAGAAGGAGATTGGCCAGCACGTGGCCGGCTG...TGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGACACCAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp CTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAGGAAAGGCTGCCTCCTaGAAGGACCCGTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LRRWPWLPKTRGPSLTSPGKAAS*KDPFQW
Trigger: CCACTGGAACGGGTCCTTCCAGGAGGCAGCCTTTCC...TGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp CGTCGTGGAGTAAAACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGACACTCTACCGACACTaGAAAGGTCTCCCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: RRGVKRAMCGFPRKQDLETLYRH*KGLPGK
Trigger: TTTCCCGGGGAGACCTTTCCAGTGTCGGTAGAGTGT...CTCCAGATCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTTACTCCACGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp CCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGGCCCTGGTTACCACCAGCTGGATCAGCTaGCAGTCTGGCTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PGQTPITDTRTEKVALVTTSWIS*QSGSQK
Trigger: CTTCTGGGAGCCAGACTGCCAGCTGATCCAGCTGGT...GGTAACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp GAGACACAGAAGTACTTCTTCATCCGACAGAGTCTCCATGAACTCAGACTCAAGGGGCGCGGGGAGCCGTaGGTTTCCTGTCACTCTCCG +
Preference number: 4 (lower is better)
Translates to: ETQKYFFIRQSLHELRLKGRGEP*VSCHSP
Trigger: CGGAGAGTGACAGGAAACCCACGGCTCCCCGCGCCC...CTTGAGTCTGAGTTCATGGAGACTCTGTCGGATGAAGAAGTACTTCTGTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CCA 90 bp GAGACACAGAAGTACTTCTTCATCCGACAGAGTCTCCATGAACTCAGACTCAAGGGCCCAGCTAGAGCCTaGGCCTGGGCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: ETQKYFFIRQSLHELRLKGPARA*AWAAAP
Trigger: AGGTGCAGCAGCCCAGGCCCAGGCTCTAGCTGGGCC...CTTGAGTCTGAGTTCATGGAGACTCTGTCGGATGAAGAAGTACTTCTGTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATACCCCCGACACGGGTaGAACAGAGTAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: EKVALVTKNQRTLINIPKYPRHG*NRVGWA
Trigger: GGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTA...TTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp GAACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCGGCCAATCTCCTTCTTaGGGTACTCCCCGACGCTGG +
Preference number: 4 (lower is better)
Translates to: ELRRWPWLPKTRGPSLTSGQSPS*GTPRRW
Trigger: CCAGCGTCGGGGAGTACCTCAAGAAGGAGATTGGCC...GGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000480071.2
CDS-3UTR TCA 90 bp ACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCGGACCACAAAGCCAATaGGCTTCCGGAACCAGGCGT +
Preference number: 4 (lower is better)
Translates to: TEKVALVTKNQRTLINIPGPQSQ*ASGTRR
Trigger: ACGCCTGGTTCCGGAAGCTCATTGGCTTTGTGGTCC...GGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000357296.7
ENST00000476834.6
CDS-3UTR TCA 90 bp CTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGCGGGGCCCACAGACTaGGGAGGCGGTCGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LINIPKFQARLKSVRRNEAGPTD*GGGRPP
Trigger: GGGAGGCCGACCGCCTCCTCAGTCTGTGGGCCCCGC...CTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp TGGATGGTCTTCACAGGCTTCTCAAAAACTACAGTGTCCTCCGGCAGGGCGGCCAACAGACACAAGAACTaGGAAGGTGGCCCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: WMVFTGFSKTTVSSGRAANRHKN*EGGPGY
Trigger: GTAACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTT...GGCCGCCCTGCCGGAGGACACTGTAGTTTTTGAGAAGCCTGTGAAGACCATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp CGTGCGTCGTGGAGTAAAACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTCCATCATGCAGTTTGTaGGTCCTTGATAGCCCCGAA +
Preference number: 4 (lower is better)
Translates to: RASWSKTCDVWLPPQTGSPSCSL*VLDSPE
Trigger: TTCGGGGCTATCAAGGACTCACAAACTGCATGATGG...AGATCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTTACTCCACGACGCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp GCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGGTGACGATGACATGGTaGGCCGGGAACCGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: AQVNPGQTPITDTRTEKVVTMTW*AGNRSP
Trigger: TGGAGACCGGTTCCCGGCGCACCATGTCATCGTCAC...CACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR GCA 90 bp CTGGAAGGACCCGTTCCAGTGGATGGTCTTCACAGGCTTCTCAAAAACTACAGTGTGACGATGACATGGTaGGCCGGGAACCGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LEGPVPVDGLHRLLKNYSVTMTW*AGNRSP
Trigger: TGGAGACCGGTTCCCGGCGCACCATGTCATCGTCAC...ACTGTAGTTTTTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGTCCTTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp GACCCGTTCCAGTGGATGGTCTTCACAGGCTTCTCAAAAACTACAGTGTCCTCCCTTCCTGATTGCTTCTaGCTTCTCAGCCGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: DPFQWMVFTGFSKTTVSSLPDCF*LLSRQG
Trigger: CCCCTGCCGGCTGAGAAGGCAGAAGCAATCAGGAAG...GGAGGACACTGTAGTTTTTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476834.6
CDS-3UTR CCA 90 bp ACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAAAGCTGGAGGCTCACGCTaGCCCCGGAGCTGGCGTAGC +
Preference number: 4 (lower is better)
Translates to: TKNQRTLINIPKFQARLKAGGSR*PRSWRS
Trigger: GCTACGCCAGCTCCGGGGCCAGCGTGAGCCTCCAGC...TTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR CCA 90 bp GAACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCACGGTGACGATGACATaGTGCGCCGGGAACCGGTCT +
Preference number: 4 (lower is better)
Translates to: ELRRWPWLPKTRGPSLTSTVTMT*CAGNRS
Trigger: AGACCGGTTCCCGGCGCACCATGTCATCGTCACCGT...GGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp ATCTGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGGATCAGCTGGCAGTCTaGCTCCCAGAAGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: IWCLSSSQPWPDSNNRHKDQLAV*LPEGLL
Trigger: GAGGAGCCCTTCTGGGAGCCAGACTGCCAGCTGATC...CTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGACACCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp ACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCACCAGCTGGATCAGCTaGCAGTCTGGCTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: TEKVALVTKNQRTLINIPTSWIS*QSGSQK
Trigger: CTTCTGGGAGCCAGACTGCCAGCTGATCCAGCTGGT...GGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000357296.7
ENST00000476834.6
CDS-3UTR CCA 90 bp GTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGTCCTCCCACACCAGCTaGATCAGCTGGCAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: VSAQVNPGQTPITDTRTESSHTS*ISWQSG
Trigger: GCCAGACTGCCAGCTGATCCAGCTGGTGTGGGAGGA...CTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp TCGTGGAGTAAAACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGCTAAAACGTGCGATGTGTaGCTTCCCCCGCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: SWSKTCDVWLPPQTGSGAKTCDV*LPPQTG
Trigger: TCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTT...AGCTCCAGATCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTTACTCCACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GCTTTATGTGTCCAGCATCTCCGTGAGCATCTGGTGTCTCAGCTCAAGTCAACCGAGCCCCGTGCGTCGTaGAGTAAAACGTGCGATGTG +
Preference number: 4 (lower is better)
Translates to: ALCVQHLREHLVSQLKSTEPRAS*SKTCDV
Trigger: CACATCGCACGTTTTACTCCACGACGCACGGGGCTC...GGTTGACTTGAGCTGAGACACCAGATGCTCACGGAGATGCTGGACACATAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278060.10
CDS-3UTR CCA 90 bp CTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAGAGCCCCGTGCGTCGTaGAGTAAAACGTGCGATGTG +
Preference number: 4 (lower is better)
Translates to: LRRWPWLPKTRGPSLTSPEPRAS*SKTCDV
Trigger: CACATCGCACGTTTTACTCCACGACGCACGGGGCTC...TGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp AACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCGGCCCAGCTAGAGCCTaGGCCTGGGCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: NIPKFQARLKSVRRNEGPGPARA*AWAAAP
Trigger: AGGTGCAGCAGCCCAGGCCCAGGCTCTAGCTGGGCC...GGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCTACCCCCGACACGGGTaGAACAGAGTAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ALVTKNQRTLINIPKFQAYPRHG*NRVGWA
Trigger: GGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTA...GGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp CACAGAAGTACTTCTTCATCCGACAGAGTCTCCATGAACTCAGACTCAAGTCCGTACCCCCGACACGGGTaGAACAGAGTAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: HRSTSSSDRVSMNSDSSPYPRHG*NRVGWA
Trigger: GGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTA...CGGACTTGAGTCTGAGTTCATGGAGACTCTGTCGGATGAAGAAGTACTTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp CCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGGCCCTGGTTACCCACAGCATTCCAGGTTaGAGAAGGAGTTCAGGACGG +
Preference number: 4 (lower is better)
Translates to: PGQTPITDTRTEKVALVTHSIPG*RRSSGR
Trigger: CCGTCCTGAACTCCTTCTTCAACCTGGAATGCTGTG...GGTAACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR TCA 90 bp CTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCACCGACAGAGTCTCCATaGACTCAGACTCAAGTCCGG +
Preference number: 4 (lower is better)
Translates to: LRRWPWLPKTRGPSLTSPPTESP*TQTQVR
Trigger: CCGGACTTGAGTCTGAGTTCATGGAGACTCTGTCGG...TGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp ACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGGGCCTCCCCGACGCTaGCGGTCGACTCCATCGCGC +
Preference number: 4 (lower is better)
Translates to: TLINIPKFQARLKSVRRNGPPRR*RSTPSR
Trigger: GCGCGATGGAGTCGACCGGCAGCGTCGGGGAGGCCC...ATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp ATCTGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGGGTCCATGCTGTGGGTaGCGCTCACACAGCATTCCA +
Preference number: 4 (lower is better)
Translates to: IWCLSSSQPWPDSNNRHKGPCCG*RSHSIP
Trigger: TGGAATGCTGTGTGAGCGGCACCCACAGCATGGACC...CTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGACACCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR GCA 90 bp TGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACGGTCCATGCTGTGGGTaGCGCTCACACAGCATTCCA +
Preference number: 4 (lower is better)
Translates to: WCLSSSQPWPDSNNRHKNGPCCG*RSHSIP
Trigger: TGGAATGCTGTGTGAGCGGCACCCACAGCATGGACC...GTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR GCA 90 bp GAACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCGGTCCATGCTGTGGGTaGCGCTCACACAGCATTCCA +
Preference number: 4 (lower is better)
Translates to: ELRRWPWLPKTRGPSLTSGPCCG*RSHSIP
Trigger: TGGAATGCTGTGTGAGCGGCACCCACAGCATGGACC...GGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000480071.2
CDS-3UTR GCA 90 bp AACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCGGGCCACCAGGTCCATaGTGTGGGTGCCGCTCACAC +
Preference number: 4 (lower is better)
Translates to: NIPKFQARLKSVRRNEGPGPPGP*CGCRSH
Trigger: GTGTGAGCGGCACCCACAGCATGGACCTGGTGGCCC...GGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR GCA 90 bp TCTGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGACTTCCTGATTGCTTCTaGCTTCTCAGCCGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SGVSAQVNPGQTPITDTRLPDCF*LLSRQG
Trigger: CCCCTGCCGGCTGAGAAGGCAGAAGCAATCAGGAAG...TCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGACACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR GCA 90 bp GTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGCTTCCTGATTGCTTCTaGCTTCTCAGCCGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VSAQVNPGQTPITDTRTELPDCF*LLSRQG
Trigger: CCCCTGCCGGCTGAGAAGGCAGAAGCAATCAGGAAG...CTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR GCA 90 bp AACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCGGTCGCCCCCAGTACTaGCCACGGCCACGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: NQRTLINIPKFQARLKSVGRPQY*PRPRSC
Trigger: ACAGCTACGTGGCCGTGGGCAGTACTGGGGGCGACC...GACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CCA 90 bp AGCCGTGGGTTTCCTGTCACTCTCCGGAGCACTTGGGTGAGACACAGAAGTACTACCCGTTCCAGTGGATaGTCTTCACAGGCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: SRGFPVTLRSTWVRHRSTTRSSG*SSQASQ
Trigger: TTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGT...AGTACTTCTGTGTCTCACCCAAGTGCTCCGGAGAGTGACAGGAAACCCACGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CCA 90 bp TCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGGAAAGGCTGCCTCCTaGAAGGACCCGTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SAQVNPGQTPITDTRTEKGKAAS*KDPFQW
Trigger: CCACTGGAACGGGTCCTTCCAGGAGGCAGCCTTTCC...CTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp AGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATACGGTGACGATGACATaGTGCGCCGGGAACCGGTCT +
Preference number: 4 (lower is better)
Translates to: RRWPWLPKTRGPSLTSPNTVTMT*CAGNRS
Trigger: AGACCGGTTCCCGGCGCACCATGTCATCGTCACCGT...ATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp CCGGTCTCCATCCTCACACTCTACCGACACTGGAAAGGTCTCCCCGGGAAAGGCGGAAGATTTTGTTGTTaGTCCCAAAGCCTATCTTCC +
Preference number: 4 (lower is better)
Translates to: PVSILTLYRHWKGLPGKGGRFCC*SQSLSS
Trigger: GGAAGATAGGCTTTGGGACCAACAACAAAATCTTCC...GCCTTTCCCGGGGAGACCTTTCCAGTGTCGGTAGAGTGTGAGGATGGAGACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476834.6
CDS-3UTR CCA 90 bp AACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGGCCCTGGTTAACCCACAGAGAACGTaGACAGACGCAAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: NPGQTPITDTRTEKVALVNPQRT*TDAKAG
Trigger: GCCTGCCTTTGCGTCTGTCCACGTTCTCTGTGGGTT...AACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp AACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAACAGGATCTGGAGCTaGGCGCCGGCGCCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: NQRTLINIPKFQARLKSVNRIWS*APAPSA
Trigger: TGCAGACGGCGCCGGCGCCCAGCTCCAGATCCTGTT...GACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CCA 90 bp AACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCAACAGGATCTGGAGCTaGGCGCCGGCGCCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: NIPKFQARLKSVRRNEGPNRIWS*APAPSA
Trigger: TGCAGACGGCGCCGGCGCCCAGCTCCAGATCCTGTT...GGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CCA 90 bp ATCTGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGGAGCCCCGTGCGTCGTaGAGTAAAACGTGCGATGTG +
Preference number: 4 (lower is better)
Translates to: IWCLSSSQPWPDSNNRHKEPRAS*SKTCDV
Trigger: CACATCGCACGTTTTACTCCACGACGCACGGGGCTC...CTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGACACCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp GAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAAGAGCCCCGTGCGTCGTaGAGTAAAACGTGCGATGTG +
Preference number: 4 (lower is better)
Translates to: EKVALVTKNQRTLINIPKEPRAS*SKTCDV
Trigger: CACATCGCACGTTTTACTCCACGACGCACGGGGCTC...TTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp AAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTTACCCCCGACACGGGTaGAACAGAGTAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KVALVTKNQRTLINIPKFYPRHG*NRVGWA
Trigger: GGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTA...AAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGCCCGCAAACAGGATCTaGAGCTGTCACTCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: AQVNPGQTPITDTRTEKVPANRI*SCHSPE
Trigger: CTCCGGAGAGTGACAGCTCCAGATCCTGTTTGCGGG...CACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357296.7
CDS-3UTR CCA 90 bp CTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAACCCACAGAGAACGTaGACAGACCTAAGGGCACGG +
Preference number: 4 (lower is better)
Translates to: LRRWPWLPKTRGPSLTSPNPQRT*TDLRAR
Trigger: CCGTGCCCTTAGGTCTGTCCACGTTCTCTGTGGGTT...TGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356306.9
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
3UTR CAA 72 bp GCAAACAGGATCTGGAGCTGTCACTCTCCGGAGCACTaGGGTGAGACACAGAAGTACTTCTTCATCCGACAG +
Preference number: 4 (lower is better)
Translates to: ANRIWSCHSPEH*GETQKYFFIRQ
Trigger: CTGTCGGATGAAGAAGTACTTCTGTGTCTCACCCAAGTGCTCCGGAGAGTGACAGCTCCAGATCCTGTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529585.5
CDS-3UTR TCA 90 bp AACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGGCCCTGGTTCACAGCATTCCAGGTTaGAGAAGGAGTTCAGGACGG +
Preference number: 4 (lower is better)
Translates to: NPGQTPITDTRTEKVALVHSIPG*RRSSGR
Trigger: CCGTCCTGAACTCCTTCTTCAACCTGGAATGCTGTG...AACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR TCA 90 bp ACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCCACAGCATTCCAGGTTaGAGAAGGAGTTCAGGACGG +
Preference number: 4 (lower is better)
Translates to: TEKVALVTKNQRTLINIPHSIPG*RRSSGR
Trigger: CCGTCCTGAACTCCTTCTTCAACCTGGAATGCTGTG...GGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000480071.2
CDS-3UTR TCA 90 bp TCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGGACCACAAAGCCAATaGGCTTCCGGAACCAGGCGT +
Preference number: 4 (lower is better)
Translates to: SAQVNPGQTPITDTRTEKGPQSQ*ASGTRR
Trigger: ACGCCTGGTTCCGGAAGCTCATTGGCTTTGTGGTCC...CTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR TCA 90 bp CTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAACTCAAGTCCGGCAATaGACCCACAGAGAACGTGGA +
Preference number: 4 (lower is better)
Translates to: LRRWPWLPKTRGPSLTSPTQVRQ*THRERG
Trigger: TCCACGTTCTCTGTGGGTTCATTGCCGGACTTGAGT...TGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp GAACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCGACAGAGTCTCCATaGACTCAGACTCAAGTCCGG +
Preference number: 4 (lower is better)
Translates to: ELRRWPWLPKTRGPSLTSPTESP*TQTQVR
Trigger: CCGGACTTGAGTCTGAGTTCATGGAGACTCTGTCGG...GGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp GCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGTGTCCAGCATCTCCGTaGGCATCTGGTGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: AQVNPGQTPITDTRTEKVCPASP*ASGVSA
Trigger: AGCTGAGACACCAGATGCTCACGGAGATGCTGGACA...CACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278060.10
CDS-3UTR GCA 90 bp TGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACCTCCCCGGGAAAGGCTaGCTCCTGGAAGGACCCGTT +
Preference number: 4 (lower is better)
Translates to: WLPKTRGPSLTSPNFKPDLPGKG*LLEGPV
Trigger: AACGGGTCCTTCCAGGAGGCAGCCTTTCCCGGGGAG...GTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp GAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATCGTGGAGTAAAACGTaGGATGTGTGGCTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: EKVALVTKNQRTLINIPKSWSKT*DVWLPP
Trigger: CGGGGGAAGCCACACATCGCACGTTTTACTCCACGA...TTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp ATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCGCTGGCCCCGGAGCTaGCGTAGCTCACGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: INIPKFQARLKSVRRNEGRWPRS*RSSRRA
Trigger: TGCCCTCCGTGAGCTACGCCAGCTCCGGGGCCAGCG...ACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR CCA 90 bp ACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAGGACCCGTTCCAGTaGATGGTCTTCACAGGCTTC +
Preference number: 4 (lower is better)
Translates to: TEKVALVTKNQRTLINIPKDPFQ*MVFTGF
Trigger: GAAGCCTGTGAAGACCATCCACTGGAACGGGTCCTT...GGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp CCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCAGCCTAGGAAAGGCTGCCTCCTaGAAGGACCCGTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PKFQARLKSVRRNEGPSLGKAAS*KDPFQW
Trigger: CCACTGGAACGGGTCCTTCCAGGAGGCAGCCTTTCC...TAGGCTGGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp CCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGGAAAGGCTGCCTCCTaGAAGGACCCGTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PWLPKTRGPSLTSPNFKPGKAAS*KDPFQW
Trigger: CCACTGGAACGGGTCCTTCCAGGAGGCAGCCTTTCC...TGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GCTTTATGTGTCCAGCATCTCCGTGAGCATCTGGTGTCTCAGCTCAAGTCAACCACACTCTACCGACACTaGAAAGGTCTCCCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: ALCVQHLREHLVSQLKSTTLYRH*KGLPGK
Trigger: TTTCCCGGGGAGACCTTTCCAGTGTCGGTAGAGTGT...GGTTGACTTGAGCTGAGACACCAGATGCTCACGGAGATGCTGGACACATAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278060.10
CDS-3UTR CCA 90 bp ACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCACACTCTACCGACACTaGAAAGGTCTCCCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: TEKVALVTKNQRTLINIPTLYRH*KGLPGK
Trigger: TTTCCCGGGGAGACCTTTCCAGTGTCGGTAGAGTGT...GGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GCATCTGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAAAACGTGCGATGTGTaGCTTCCCCCGCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: ASGVSAQVNPGQTPITDTKTCDV*LPPQTG
Trigger: TCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTT...TGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGACACCAGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp ACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAAACGTGCGATGTGTaGCTTCCCCCGCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: TEKVALVTKNQRTLINIPKTCDV*LPPQTG
Trigger: TCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTT...GGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp AACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCTACCCCCGACACGGGTaGAACAGAGTAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: NQRTLINIPKFQARLKSVYPRHG*NRVGWA
Trigger: GGCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTA...GACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGGCCCTGCTGAGAAGGTGGCCCTaGTTACCAAAAACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: VNPGQTPITDTRTEKVALLRRWP*LPKTRG
Trigger: TCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAG...CAGGGCCACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR TCA 90 bp CCTGGAAGGACCCGTTCCAGTGGATGGTCTTCACAGGCTTCTCAAAAACTACAGTCCGGAGCACTTGGGTaGGACACAGAAGTACTTCTT +
Preference number: 4 (lower is better)
Translates to: PGRTRSSGWSSQASQKLQSGALG*DTEVLL
Trigger: AAGAAGTACTTCTGTGTCTCACCCAAGTGCTCCGGA...CTGTAGTTTTTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGTCCTTCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp AACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGGCCCTGGTTAACAGACACAAGAACTaGGAAGGTGGCCCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: NPGQTPITDTRTEKVALVNRHKN*EGGPGY
Trigger: GTAACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTT...AACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR TCA 90 bp ACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCCCATCATGCAGTTTGTaGGTCCTTGATAGCCCCGAA +
Preference number: 4 (lower is better)
Translates to: TEKVALVTKNQRTLINIPPSCSL*VLDSPE
Trigger: TTCGGGGCTATCAAGGACTCACAAACTGCATGATGG...GGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp AAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGGGCCACCAGGTCCATaGTGTGGGTGCCGCTCACAC +
Preference number: 4 (lower is better)
Translates to: KNQRTLINIPKFQARLKSGPPGP*CGCRSH
Trigger: GTGTGAGCGGCACCCACAGCATGGACCTGGTGGCCC...AGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR GCA 90 bp GAACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCGCCTATCTTCCTGATTaGTTCTGCCTTCTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: ELRRWPWLPKTRGPSLTSAYLPD*FCLLSR
Trigger: CCGGCTGAGAAGGCAGAAGCAATCAGGAAGATAGGC...GGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000357296.7
ENST00000476834.6
CDS-3UTR GCA 90 bp ACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATCTGGGCTGCTGCACCTaGGGGGCCCACAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: TLINIPKFQARLKSVRRNLGCCT*GAHRLR
Trigger: CCTCAGTCTGTGGGCCCCGCAGGTGCAGCAGCCCAG...ATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp TCTGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAAAGGACCCGTTCCAGTaGATGGTCTTCACAGGCTTC +
Preference number: 4 (lower is better)
Translates to: SGVSAQVNPGQTPITDTRKDPFQ*MVFTGF
Trigger: GAAGCCTGTGAAGACCATCCACTGGAACGGGTCCTT...TCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGACACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp CTGGAAGGACCCGTTCCAGTGGATGGTCTTCACAGGCTTCTCAAAAACTACAGTAAGGACCCGTTCCAGTaGATGGTCTTCACAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LEGPVPVDGLHRLLKNYSKDPFQ*MVFTGF
Trigger: GAAGCCTGTGAAGACCATCCACTGGAACGGGTCCTT...ACTGTAGTTTTTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGTCCTTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAAACACTCTACCGACACTaGAAAGGTCTCCCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: EKVALVTKNQRTLINIPKTLYRH*KGLPGK
Trigger: TTTCCCGGGGAGACCTTTCCAGTGTCGGTAGAGTGT...TTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GAACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCACACTCTACCGACACTaGAAAGGTCTCCCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: ELRRWPWLPKTRGPSLTSTLYRH*KGLPGK
Trigger: TTTCCCGGGGAGACCTTTCCAGTGTCGGTAGAGTGT...GGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp TCCAGCATCTCCGTGAGCATCTGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACGGAAGATTTTGTTGTTaGTCCCAAAGCCTATCTTCC +
Preference number: 4 (lower is better)
Translates to: SSISVSIWCLSSSQPWPDGRFCC*SQSLSS
Trigger: GGAAGATAGGCTTTGGGACCAACAACAAAATCTTCC...GTCTGGCCAGGGTTGACTTGAGCTGAGACACCAGATGCTCACGGAGATGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278060.10
CDS-3UTR CCA 90 bp AACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCTCCTCCCACACCAGCTaGATCAGCTGGCAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: NIPKFQARLKSVRRNEGPSSHTS*ISWQSG
Trigger: GCCAGACTGCCAGCTGATCCAGCTGGTGTGGGAGGA...GGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000476834.6
CDS-3UTR CCA 90 bp CTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAACTCTCCGGAGCACTTaGGTGAGACACAGAAGTACT +
Preference number: 4 (lower is better)
Translates to: LRRWPWLPKTRGPSLTSPTLRST*VRHRST
Trigger: AGTACTTCTGTGTCTCACCCAAGTGCTCCGGAGAGT...TGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp ACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCACTCTCCGGAGCACTTaGGTGAGACACAGAAGTACT +
Preference number: 4 (lower is better)
Translates to: TEKVALVTKNQRTLINIPTLRST*VRHRST
Trigger: AGTACTTCTGTGTCTCACCCAAGTGCTCCGGAGAGT...GGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGAAAACGTGCGATGTGTaGCTTCCCCCGCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: AQVNPGQTPITDTRTEKVKTCDV*LPPQTG
Trigger: TCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTT...CACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp GAACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCAAAACGTGCGATGTGTaGCTTCCCCCGCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: ELRRWPWLPKTRGPSLTSKTCDV*LPPQTG
Trigger: TCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTT...GGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp ATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCAGCCCCGCAAACAGGATCTaGAGCTGTCACTCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: IPKFQARLKSVRRNEGPSPANRI*SCHSPE
Trigger: CTCCGGAGAGTGACAGCTCCAGATCCTGTTTGCGGG...GCTGGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480071.2
ENST00000529585.5
CDS-3UTR CCA 90 bp GCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAACCCACAGAGAACGTaGACAGACCTAAGGGCACGG +
Preference number: 4 (lower is better)
Translates to: ALVTKNQRTLINIPKFQANPQRT*TDLRAR
Trigger: CCGTGCCCTTAGGTCTGTCCACGTTCTCTGTGGGTT...GGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356306.9
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp CTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCACAAAGCCTATCTTCCTaGTTGCTTCTGCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LRRWPWLPKTRGPSLTSPQSLSS*LLLPSQ
Trigger: CTGAGAAGGCAGAAGCAATCAGGAAGATAGGCTTTG...TGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000357296.7
ENST00000476834.6
CDS-3UTR TCA 90 bp AACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCGGACCACAAAGCCAATaGGCTTCCGGAACCAGGCGT +
Preference number: 4 (lower is better)
Translates to: NIPKFQARLKSVRRNEGPGPQSQ*ASGTRR
Trigger: ACGCCTGGTTCCGGAAGCTCATTGGCTTTGTGGTCC...GGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000476834.6
CDS-3UTR TCA 90 bp GAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATCCGGAGCACTTGGGTaGGACACAGAAGTACTTCTT +
Preference number: 4 (lower is better)
Translates to: EKVALVTKNQRTLINIPKSGALG*DTEVLL
Trigger: AAGAAGTACTTCTGTGTCTCACCCAAGTGCTCCGGA...TTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp ACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGGGGTCTCTGCAGCGTaGAGGAACTCCCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TLINIPKFQARLKSVRRNGVSAA*RNSRVW
Trigger: CCAGACCCGGGAGTTCCTGCACGCTGCAGAGACCCC...ATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR GCA 90 bp CCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCAGCCTATCGTGGAGTAAAACGTaGGATGTGTGGCTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: PKFQARLKSVRRNEGPSLSWSKT*DVWLPP
Trigger: CGGGGGAAGCCACACATCGCACGTTTTACTCCACGA...TAGGCTGGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp CCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCATCGTGGAGTAAAACGTaGGATGTGTGGCTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: PWLPKTRGPSLTSPNFKPSWSKT*DVWLPP
Trigger: CGGGGGAAGCCACACATCGCACGTTTTACTCCACGA...TGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAAACCCGTTCCAGTGGATaGTCTTCACAGGCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: EKVALVTKNQRTLINIPKTRSSG*SSQASQ
Trigger: TTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGT...TTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp TCTTCATCCGACAGAGTCTCCATGAACTCAGACTCAAGTCCGGCAATGAACCCAACCCGTTCCAGTGGATaGTCTTCACAGGCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: SSSDRVSMNSDSSPAMNPTRSSG*SSQASQ
Trigger: TTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGT...TGGGTTCATTGCCGGACTTGAGTCTGAGTTCATGGAGACTCTGTCGGATGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GAACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCACTCTCCGGAGCACTTaGGTGAGACACAGAAGTACT +
Preference number: 4 (lower is better)
Translates to: ELRRWPWLPKTRGPSLTSTLRST*VRHRST
Trigger: AGTACTTCTGTGTCTCACCCAAGTGCTCCGGAGAGT...GGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGACTCTCCGGAGCACTTaGGTGAGACACAGAAGTACT +
Preference number: 4 (lower is better)
Translates to: VSAQVNPGQTPITDTRTETLRST*VRHRST
Trigger: AGTACTTCTGTGTCTCACCCAAGTGCTCCGGAGAGT...CTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR TCA 90 bp ATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCAGTCCGAGGGCTTCTaGGTAGCCGGGAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: INIPKFQARLKSVRRNEGQSEGF*VAGRSG
Trigger: TCCAGACCTCCCGGCTACTCAGAAGCCCTCGGACTG...ACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278060.10
CDS-3UTR TCA 90 bp CCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCAGCCTAACTCAAGTCCGGCAATaGACCCACAGAGAACGTGGA +
Preference number: 4 (lower is better)
Translates to: PKFQARLKSVRRNEGPSLTQVRQ*THRERG
Trigger: TCCACGTTCTCTGTGGGTTCATTGCCGGACTTGAGT...TAGGCTGGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp AAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTACTCAAGTCCGGCAATaGACCCACAGAGAACGTGGA +
Preference number: 4 (lower is better)
Translates to: KVALVTKNQRTLINIPKFTQVRQ*THRERG
Trigger: TCCACGTTCTCTGTGGGTTCATTGCCGGACTTGAGT...AAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp AGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATAACAGACACAAGAACTaGGAAGGTGGCCCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: RRWPWLPKTRGPSLTSPNNRHKN*EGGPGY
Trigger: GTAACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTT...ATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp ATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCAGCGCCTATCTTCCTGATTaGTTCTGCCTTCTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: IPKFQARLKSVRRNEGPSAYLPD*FCLLSR
Trigger: CCGGCTGAGAAGGCAGAAGCAATCAGGAAGATAGGC...GCTGGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000476834.6
CDS-3UTR CCA 90 bp AAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTTACTCAGCAGCCAGCTaGAAGACGGGGTTACCCCGG +
Preference number: 4 (lower is better)
Translates to: KNQRTLINIPKFQARLKSYSAAS*KTGLPR
Trigger: CCGGGGTAACCCCGTCTTCCAGCTGGCTGCTGAGTA...AGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR CCA 90 bp AAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTACACTCTACCGACACTaGAAAGGTCTCCCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: KVALVTKNQRTLINIPKFTLYRH*KGLPGK
Trigger: TTTCCCGGGGAGACCTTTCCAGTGTCGGTAGAGTGT...AAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp CCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGGCCCTGGTTACCGGAAGATTTTGTTGTTaGTCCCAAAGCCTATCTTCC +
Preference number: 4 (lower is better)
Translates to: PGQTPITDTRTEKVALVTGRFCC*SQSLSS
Trigger: GGAAGATAGGCTTTGGGACCAACAACAAAATCTTCC...GGTAACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp AAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGATCAGCTGGCAGTCTaGCTCCCAGAAGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KNQRTLINIPKFQARLKSDQLAV*LPEGLL
Trigger: GAGGAGCCCTTCTGGGAGCCAGACTGCCAGCTGATC...AGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000476834.6
CDS-3UTR CCA 90 bp AACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCAACCCACAGAGAACGTaGACAGACGCAAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: NIPKFQARLKSVRRNEGPNPQRT*TDAKAG
Trigger: GCCTGCCTTTGCGTCTGTCCACGTTCTCTGTGGGTT...GGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000476834.6
CDS-3UTR CCA 90 bp AGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATACTCTCCGGAGCACTTaGGTGAGACACAGAAGTACT +
Preference number: 4 (lower is better)
Translates to: RRWPWLPKTRGPSLTSPNTLRST*VRHRST
Trigger: AGTACTTCTGTGTCTCACCCAAGTGCTCCGGAGAGT...ATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp AGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATCTGAGAAGGTGGCCCTaGTTACCAAAAACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: RRWPWLPKTRGPSLTSPNLRRWP*LPKTRG
Trigger: TCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAG...ATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp AGCACTTGGGTGAGACACAGAAGTACTTCTTCATCCGACAGAGTCTCCATGAACCTGAGAAGGTGGCCCTaGTTACCAAAAACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: STWVRHRSTSSSDRVSMNLRRWP*LPKTRG
Trigger: TCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAG...GTTCATGGAGACTCTGTCGGATGAAGAAGTACTTCTGTGTCTCACCCAAGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAAAGCTCAAGTCAACCCTaGCCAGACTCCAATAACAGA +
Preference number: 4 (lower is better)
Translates to: EKVALVTKNQRTLINIPKSSSQP*PDSNNR
Trigger: TCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCT...TTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CCA 90 bp GTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGATCTCCGTGAGCATCTaGTGTCTCAGCTCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: VSAQVNPGQTPITDTRTEISVSI*CLSSSQ
Trigger: TTGACTTGAGCTGAGACACCAGATGCTCACGGAGAT...CTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278060.10
CDS-3UTR TCA 90 bp ACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGGCCAATCTCCTTCTTaGGGTACTCCCCGACGCTGG +
Preference number: 4 (lower is better)
Translates to: TLINIPKFQARLKSVRRNGQSPS*GTPRRW
Trigger: CCAGCGTCGGGGAGTACCTCAAGAAGGAGATTGGCC...ATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR TCA 90 bp TCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGCAAAGCCTATCTTCCTaGTTGCTTCTGCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SAQVNPGQTPITDTRTEKQSLSS*LLLPSQ
Trigger: CTGAGAAGGCAGAAGCAATCAGGAAGATAGGCTTTG...CTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR TCA 90 bp CAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAACTCAAGTCCGGCAATaGACCCACAGAGAACGTGGA +
Preference number: 4 (lower is better)
Translates to: QRTLINIPKFQARLKSVRTQVRQ*THRERG
Trigger: TCCACGTTCTCTGTGGGTTCATTGCCGGACTTGAGT...TCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp ACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAAACCGACAGAGTCTCCATaGACTCAGACTCAAGTCCGG +
Preference number: 4 (lower is better)
Translates to: TKNQRTLINIPKFQARLKPTESP*TQTQVR
Trigger: CCGGACTTGAGTCTGAGTTCATGGAGACTCTGTCGG...TTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp AAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCCATCATGCAGTTTGTaGGTCCTTGATAGCCCCGAA +
Preference number: 4 (lower is better)
Translates to: KVALVTKNQRTLINIPKFPSCSL*VLDSPE
Trigger: TTCGGGGCTATCAAGGACTCACAAACTGCATGATGG...AAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp CTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGTGACGATGACATGGTaGGCCGGGAACCGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LINIPKFQARLKSVRRNEVTMTW*AGNRSP
Trigger: TGGAGACCGGTTCCCGGCGCACCATGTCATCGTCAC...CTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp ACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCGTGGAGTAAAACGTaGGATGTGTGGCTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: TKNQRTLINIPKFQARLKSWSKT*DVWLPP
Trigger: CGGGGGAAGCCACACATCGCACGTTTTACTCCACGA...TTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp CTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGTACTCAGCAGCCAGCTaGAAGACGGGGTTACCCCGG +
Preference number: 4 (lower is better)
Translates to: LINIPKFQARLKSVRRNEYSAAS*KTGLPR
Trigger: CCGGGGTAACCCCGTCTTCCAGCTGGCTGCTGAGTA...CTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR CCA 90 bp AACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAAGGACCCGTTCCAGTaGATGGTCTTCACAGGCTTC +
Preference number: 4 (lower is better)
Translates to: NQRTLINIPKFQARLKSVKDPFQ*MVFTGF
Trigger: GAAGCCTGTGAAGACCATCCACTGGAACGGGTCCTT...GACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp TGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACAAGGACCCGTTCCAGTaGATGGTCTTCACAGGCTTC +
Preference number: 4 (lower is better)
Translates to: WLPKTRGPSLTSPNFKPDKDPFQ*MVFTGF
Trigger: GAAGCCTGTGAAGACCATCCACTGGAACGGGTCCTT...GTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp CTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGAAAGGCTGCCTCCTaGAAGGACCCGTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LINIPKFQARLKSVRRNEGKAAS*KDPFQW
Trigger: CCACTGGAACGGGTCCTTCCAGGAGGCAGCCTTTCC...CTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp AAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCTGAGAAGGTGGCCCTaGTTACCAAAAACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: KVALVTKNQRTLINIPKFLRRWP*LPKTRG
Trigger: TCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAG...AAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp AACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCTCCGGAGCACTTGGGTaGGACACAGAAGTACTTCTT +
Preference number: 4 (lower is better)
Translates to: NIPKFQARLKSVRRNEGPSGALG*DTEVLL
Trigger: AAGAAGTACTTCTGTGTCTCACCCAAGTGCTCCGGA...GGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp GTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAACAGACACAAGAACTaGGAAGGTGGCCCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: VTKNQRTLINIPKFQARLNRHKN*EGGPGY
Trigger: GTAACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTT...CAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp AAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTTCGTGGAGTAAAACGTaGGATGTGTGGCTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: KNQRTLINIPKFQARLKSSWSKT*DVWLPP
Trigger: CGGGGGAAGCCACACATCGCACGTTTTACTCCACGA...AGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp TGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACACCCGTTCCAGTGGATaGTCTTCACAGGCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: WLPKTRGPSLTSPNFKPDTRSSG*SSQASQ
Trigger: TTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGT...GTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp GTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGACTCTCCGGAGCACTTaGGTGAGACACAGAAGTACT +
Preference number: 4 (lower is better)
Translates to: VTKNQRTLINIPKFQARLTLRST*VRHRST
Trigger: AGTACTTCTGTGTCTCACCCAAGTGCTCCGGAGAGT...CAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp GTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGCAAAGCCTATCTTCCTaGTTGCTTCTGCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: VTKNQRTLINIPKFQARLQSLSS*LLLPSQ
Trigger: CTGAGAAGGCAGAAGCAATCAGGAAGATAGGCTTTG...CAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000476834.6
CDS-3UTR TCA 90 bp ATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCGACAGAGTCTCCATaGACTCAGACTCAAGTCCGG +
Preference number: 4 (lower is better)
Translates to: INIPKFQARLKSVRRNEGPTESP*TQTQVR
Trigger: CCGGACTTGAGTCTGAGTTCATGGAGACTCTGTCGG...ACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR GCA 90 bp CTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGTCGTGGAGTAAAACGTaGGATGTGTGGCTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: LINIPKFQARLKSVRRNESWSKT*DVWLPP
Trigger: CGGGGGAAGCCACACATCGCACGTTTTACTCCACGA...CTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR TCA 90 bp CTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGAACAGACACAAGAACTaGGAAGGTGGCCCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: LINIPKFQARLKSVRRNENRHKN*EGGPGY
Trigger: GTAACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTT...CTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp CTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGACCCGTTCCAGTGGATaGTCTTCACAGGCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LINIPKFQARLKSVRRNETRSSG*SSQASQ
Trigger: TTGAGAAGCCTGTGAAGACCATCCACTGGAACGGGT...CTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CCA 90 bp CTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGAGCTCAAGTCAACCCTaGCCAGACTCCAATAACAGA +
Preference number: 4 (lower is better)
Translates to: LINIPKFQARLKSVRRNESSSQP*PDSNNR
Trigger: TCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCT...CTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278060.10
CDS-3UTR TCA 90 bp CTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGAGAAAACTCCAAACGTaGATGAACAAAGCCACTGGA +
Preference number: 4 (lower is better)
Translates to: LINIPKFQARLKSVRRNERKLQT*MNKATG
Trigger: TCCAGTGGCTTTGTTCATTCACGTTTGGAGTTTTCT...CTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476834.6
CDS CCA 90 bp CCCCGAAGCAGCGCTCCGAGCGGATGCGGCCCCCGGCGCGGGCCGTaGCCTCCAGGACCCGCAGGTGCGGGAAGGCGGAGTGGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: PRSSAPSGCGPRRGP*PPGPAGAGRRSGRR
Trigger: TCTGCGGCCACTCCGCCTTCCCGCACCTGCGGGTCCTGGAGGCCACGGCCCGCGCCGGGGGCCGCATCCGCTCGGAGCGCTGCTTCGGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS CCA 90 bp CACCGAAGCAGCGCTCCGAGCGGATGCGGCCCCCGGCGCGGGCCGTaGCCTCCAGGACCCGCAGGTGCGGGAAGGCGGAGTGGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: HRSSAPSGCGPRRGP*PPGPAGAGRRSGRR
Trigger: TCTGCGGCCACTCCGCCTTCCCGCACCTGCGGGTCCTGGAGGCCACGGCCCGCGCCGGGGGCCGCATCCGCTCGGAGCGCTGCTTCGGTG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000480071.2
CDS GCA 90 bp GCCAGCTGGAAGACGGGGTTACCCCGGGAGGGCCCATGGATCCAGTaGGCGCCCACCTCCACCACGCCACCGAAGCAGCGCTCCGAGCGG +
Preference number: 5 (lower is better)
Translates to: ASWKTGLPREGPWIQ*APTSTTPPKQRSER
Trigger: CCGCTCGGAGCGCTGCTTCGGTGGCGTGGTGGAGGTGGGCGCGCACTGGATCCATGGGCCCTCCCGGGGTAACCCCGTCTTCCAGCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000480071.2
CDS-3UTR CAA 90 bp CCCAGTACTGCCCACGGCCACGTAGCTGTAGGACCCCCTAGTGTACGGGGCGCTGACCGCAGGACGCTCTaGGGCGCGGGGAGCCGTGGG +
Preference number: 5 (lower is better)
Translates to: PSTAHGHVAVGPPSVRGADRRTL*GAGSRG
Trigger: CCCACGGCTCCCCGCGCCCAAGAGCGTCCTGCGGTC...AGCGCCCCGTACACTAGGGGGTCCTACAGCTACGTGGCCGTGGGCAGTACTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS CCA 90 bp TACTCAGCAGCCAGCTGGAAGACGGGGTTACCCCGGGAGGGCCCATaGATCCAGTGCGCGCCCACCTCCACCACGCCACCGAAGCAGCGC +
Preference number: 5 (lower is better)
Translates to: YSAASWKTGLPREGP*IQCAPTSTTPPKQR
Trigger: GCGCTGCTTCGGTGGCGTGGTGGAGGTGGGCGCGCACTGGATCCATGGGCCCTCCCGGGGTAACCCCGTCTTCCAGCTGGCTGCTGAGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000480071.2
CDS CCA 90 bp CGTAGAACAGAGTCGCCATCTCCGCCACCAGCTGGAGGCTCACGCTaGCCCCGGAGCTGGCGTAGCTCACGGAGGGCAGGCCCACGTGAC +
Preference number: 5 (lower is better)
Translates to: RRTESPSPPPAGGSR*PRSWRSSRRAGPRD
Trigger: GTCACGTGGGCCTGCCCTCCGTGAGCTACGCCAGCTCCGGGGCCAGCGTGAGCCTCCAGCTGGTGGCGGAGATGGCGACTCTGTTCTACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000368535.2
ENST00000480071.2
ENST00000528127.1
CDS TCA 90 bp CGGCCTTGTGGAGCCGTAGGTCGCCTTCCCTGGCCGGCGCCCTCCTaGCTAACTCTGAGCCCTGAGTTTCGGGGCGGTGAACTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: RPCGAVGRLPWPAPS*LTLSPEFRGGELWR
Trigger: CCGCCAGAGTTCACCGCCCCGAAACTCAGGGCTCAGAGTTAGTCAGGAGGGCGCCGGCCAGGGAAGGCGACCTACGGCTCCACAAGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528127.1
CDS-3UTR CAA 90 bp CCCCCTAGTGTACGGGGCGCTGTGCCAGCGAGACCGCAGGACGCTCTTGGGCGCGCAGTTTGTGAGTCCTaGATAGCCCCGAAGCAGCGC +
Preference number: 5 (lower is better)
Translates to: PPSVRGAVPARPQDALGRAVCES*IAPKQR
Trigger: GCGCTGCTTCGGGGCTATCAAGGACTCACAAACTGC...GCGCCCAAGAGCGTCCTGCGGTCTCGCTGGCACAGCGCCCCGTACACTAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000476834.6
ENST00000483211.6
CDS TCA 90 bp CCTCATCCTCTGTCCAGCCGGCCACGTGCTGGCCAATCTCCTTCTTaGGGTACTCCCCGACGCTGGGCACCGGGGTCTCTGCAGCGTGCA +
Preference number: 5 (lower is better)
Translates to: PHPLSSRPRAGQSPS*GTPRRWAPGSLQRA
Trigger: TGCACGCTGCAGAGACCCCGGTGCCCAGCGTCGGGGAGTACCTCAAGAAGGAGATTGGCCAGCACGTGGCCGGCTGGACAGAGGATGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000368535.2
ENST00000480071.2
ENST00000528127.1
CDS-3UTR CAA 90 bp CGTGCGTCGTGGAGTAAAACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGACCGCAGGACGCTCTaGGGCGCGGGGAGCCGTGGG +
Preference number: 5 (lower is better)
Translates to: RASWSKTCDVWLPPQTGSDRRTL*GAGSRG
Trigger: CCCACGGCTCCCCGCGCCCAAGAGCGTCCTGCGGTC...AGATCCTGTTTGCGGGGGAAGCCACACATCGCACGTTTTACTCCACGACGCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS CCA 90 bp TTCAGCTTCCTGGTCTCCTCATCCTCTGTCCAGCCGGCCACGTGCTaGCCAATCTCCTTCTTGAGGTACTCCCCGACGCTGGGCACCGGG +
Preference number: 5 (lower is better)
Translates to: FSFLVSSSSVQPATC*PISFLRYSPTLGTG
Trigger: CCCGGTGCCCAGCGTCGGGGAGTACCTCAAGAAGGAGATTGGCCAGCACGTGGCCGGCTGGACAGAGGATGAGGAGACCAGGAAGCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000368535.2
ENST00000480071.2
ENST00000528127.1
CDS GCA 90 bp AGCTTCAGCTTCCTGGTCTCCTCATCCTCTGTCCAGCCGGCCACGTaGTGGCCAATCTCCTTCTTGAGGTACTCCCCGACGCTGGGCACC +
Preference number: 5 (lower is better)
Translates to: SFSFLVSSSSVQPAT*WPISFLRYSPTLGT
Trigger: GGTGCCCAGCGTCGGGGAGTACCTCAAGAAGGAGATTGGCCAGCACGTGGCCGGCTGGACAGAGGATGAGGAGACCAGGAAGCTGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000368535.2
ENST00000480071.2
ENST00000528127.1
CDS GCA 90 bp AATCTCCTTCTTGAGGTACTCCCCGACGCTGGGCACCGGGGTCTCTaGAGCGTGCAGGAACTCCCGGGTCTGGTCTATCAGGCCGTAGAA +
Preference number: 5 (lower is better)
Translates to: NLLLEVLPDAGHRGL*SVQELPGLVYQAVE
Trigger: TTCTACGGCCTGATAGACCAGACCCGGGAGTTCCTGCACGCTGCAGAGACCCCGGTGCCCAGCGTCGGGGAGTACCTCAAGAAGGAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000368535.2
ENST00000480071.2
ENST00000528127.1
CDS-3UTR CAA 90 bp GCCCACAGACTGAGGAGGCGGTCGGCCTCCCTCCATCCCGACAGCAGAGCCCCGGCAGTTTGTGAGTCCTaGATAGCCCTTAGAAAAGGT +
Preference number: 5 (lower is better)
Translates to: AHRLRRRSASLHPDSRAPAVCES*IALRKG
Trigger: ACCTTTTCTAAGGGCTATCAAGGACTCACAAACTGC...CGGGGCTCTGCTGTCGGGATGGAGGGAGGCCGACCGCCTCCTCAGTCTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356306.9
ENST00000480071.2
CDS-3UTR CAA 90 bp AGAAATGAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGGCGCAGTTTGTGAGTCCTaGATAGCCCCGAAGCAGCGC +
Preference number: 5 (lower is better)
Translates to: RNEGPSLPPTRVEQSRLGAVCES*IAPKQR
Trigger: GCGCTGCTTCGGGGCTATCAAGGACTCACAAACTGC...GCCCAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTCATTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS-3UTR CAA 90 bp CCTGGGCCTGGGCTGCTGCACCTGCGGGGCCCACAGACTGAGGAGGCGGTCGGCTCTATGTGTGCTGATTaGGAAACACTGACAAGTTCT +
Preference number: 5 (lower is better)
Translates to: PGPGLLHLRGPQTEEAVGSMCAD*ETLTSS
Trigger: AGAACTTGTCAGTGTTTCCAAATCAGCACACATAGA...GCCGACCGCCTCCTCAGTCTGTGGGCCCCGCAGGTGCAGCAGCCCAGGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476834.6
CDS-3UTR CAA 90 bp ATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCAGCGACCGCAGGACGCTCTaGGGCGCGGGGAGCCGTGGG +
Preference number: 5 (lower is better)
Translates to: IPKFQARLKSVRRNEGPSDRRTL*GAGSRG
Trigger: CCCACGGCTCCCCGCGCCCAAGAGCGTCCTGCGGTC...GCTGGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CAA 90 bp CCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACCGCAGGACGCTCTaGGGCGCGGGGAGCCGTGGG +
Preference number: 5 (lower is better)
Translates to: PWLPKTRGPSLTSPNFKPDRRTL*GAGSRG
Trigger: CCCACGGCTCCCCGCGCCCAAGAGCGTCCTGCGGTC...TGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000476834.6
ENST00000483211.6
CDS-3UTR CAA 90 bp ACGTGCGATGTGTGGCTTCCCCCGCAAACAGGATCTGGAGCTGGGCGCCGGCGCAGGAAGATTTTGTTGTaGGTCCCAAAGCCTATCTTC +
Preference number: 5 (lower is better)
Translates to: TCDVWLPPQTGSGAGRRRRKILL*VPKPIF
Trigger: GAAGATAGGCTTTGGGACCAACAACAAAATCTTCCT...GCGCCGGCGCCCAGCTCCAGATCCTGTTTGCGGGGGAAGCCACACATCGCACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476834.6
CDS-3UTR CAA 90 bp AGGATCTGGAGCTGTCACTCTCCGGAGCACTTGGGTGAGACACAGAAGTACTTCGCAGTTTGTGAGTCCTaGATAGCCCCGAAGCAGCGC +
Preference number: 5 (lower is better)
Translates to: RIWSCHSPEHLGETQKYFAVCES*IAPKQR
Trigger: GCGCTGCTTCGGGGCTATCAAGGACTCACAAACTGC...GAAGTACTTCTGTGTCTCACCCAAGTGCTCCGGAGAGTGACAGCTCCAGATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529585.5
CDS GCA 90 bp AAATGTTCCCTAAGAAAACCTAAGGGCACGGTGACGATGACATGGTaGGCCGGGAACCGGTCTCCATCCTCACACTCTACCGACACTGGA +
Preference number: 5 (lower is better)
Translates to: KCSLRKPKGTVTMTW*AGNRSPSSHSTDTG
Trigger: TCCAGTGTCGGTAGAGTGTGAGGATGGAGACCGGTTCCCGGCGCACCATGTCATCGTCACCGTGCCCTTAGGTTTTCTTAGGGAACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000357296.7
ENST00000368535.2
CDS CCA 90 bp TCCAAATGTTCCCTAAGAAAACCTAAGGGCACGGTGACGATGACATaGTGCGCCGGGAACCGGTCTCCATCCTCACACTCTACCGACACT +
Preference number: 5 (lower is better)
Translates to: SKCSLRKPKGTVTMT*CAGNRSPSSHSTDT
Trigger: AGTGTCGGTAGAGTGTGAGGATGGAGACCGGTTCCCGGCGCACCATGTCATCGTCACCGTGCCCTTAGGTTTTCTTAGGGAACATTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000357296.7
ENST00000368535.2
CDS-3UTR CAA 90 bp CTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCATGGCCAATCTCCTTCTaGAGGTACTCCCCGACGCTG +
Preference number: 5 (lower is better)
Translates to: LRRWPWLPKTRGPSLTSPWPISF*RYSPTL
Trigger: CAGCGTCGGGGAGTACCTCAAGAAGGAGATTGGCCA...TGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000480071.2
CDS-3UTR CAA 90 bp GTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGTGGCCAATCTCCTTCTaGAGGTACTCCCCGACGCTG +
Preference number: 5 (lower is better)
Translates to: VSAQVNPGQTPITDTRTEWPISF*RYSPTL
Trigger: CAGCGTCGGGGAGTACCTCAAGAAGGAGATTGGCCA...CTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CAA 90 bp AGAAGAAATGAGGGTCCCAGCCTACCCCCGACACGGGTGGAACAGAGTAGGCTGGCAGTTTGTGAGTCCTaGATAGCCCTTAGAAAAGGT +
Preference number: 5 (lower is better)
Translates to: RRNEGPSLPPTRVEQSRLAVCES*IALRKG
Trigger: ACCTTTTCTAAGGGCTATCAAGGACTCACAAACTGC...CAGCCTACTCTGTTCCACCCGTGTCGGGGGTAGGCTGGGACCCTCATTTCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR CAA 90 bp TGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGGCCAATCTCCTTCTaGAGGTACTCCCCGACGCTG +
Preference number: 5 (lower is better)
Translates to: WLPKTRGPSLTSPNFKPDWPISF*RYSPTL
Trigger: CAGCGTCGGGGAGTACCTCAAGAAGGAGATTGGCCA...GTCTGGCTTGAAATTTGGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR CAA 90 bp GTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGGCCCTGGCAGTTTGTGAGTCCTaGATAGCCCTTAGAAAAGGT +
Preference number: 5 (lower is better)
Translates to: VNPGQTPITDTRTEKVALAVCES*IALRKG
Trigger: ACCTTTTCTAAGGGCTATCAAGGACTCACAAACTGC...CAGGGCCACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CAA 90 bp ACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCGCAGTTTGTGAGTCCTaGATAGCCCTTAGAAAAGGT +
Preference number: 5 (lower is better)
Translates to: TEKVALVTKNQRTLINIPAVCES*IALRKG
Trigger: ACCTTTTCTAAGGGCTATCAAGGACTCACAAACTGC...GGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000480071.2
CDS-3UTR CAA 90 bp ACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCTCCAGGAAGATTTTGTaGTTGGTCCCAAAGCCTATC +
Preference number: 5 (lower is better)
Translates to: TEKVALVTKNQRTLINIPSRKIL*LVPKPI
Trigger: GATAGGCTTTGGGACCAACAACAAAATCTTCCTGGA...GGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000357296.7
ENST00000476834.6
CDS-3UTR CAA 90 bp ACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCCCAACTCCAGGAAGATTTaGTTGTTGGTCCCAAAGCCT +
Preference number: 5 (lower is better)
Translates to: TEKVALVTKNQRTLINIPNSRKI*LLVPKP
Trigger: AGGCTTTGGGACCAACAACAAAATCTTCCTGGAGTT...GGGGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000357296.7
ENST00000476834.6
CDS-3UTR CAA 90 bp AACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGGCCCTGGTTAGGAAGATTTTGTTGTaGGTCCCAAAGCCTATCTTC +
Preference number: 5 (lower is better)
Translates to: NPGQTPITDTRTEKVALVRKILL*VPKPIF
Trigger: GAAGATAGGCTTTGGGACCAACAACAAAATCTTCCT...AACCAGGGCCACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CAA 90 bp GCATCTGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGGAAGATTTTGTTGTaGGTCCCAAAGCCTATCTTC +
Preference number: 5 (lower is better)
Translates to: ASGVSAQVNPGQTPITDTRKILL*VPKPIF
Trigger: GAAGATAGGCTTTGGGACCAACAACAAAATCTTCCT...TGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGACACCAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CAA 90 bp GCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACTGAGAAGGTGTCCAGGAAGATTTTGTaGTTGGTCCCAAAGCCTATC +
Preference number: 5 (lower is better)
Translates to: AQVNPGQTPITDTRTEKVSRKIL*LVPKPI
Trigger: GATAGGCTTTGGGACCAACAACAAAATCTTCCTGGA...CACCTTCTCAGTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CAA 90 bp GAACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCTCCAGGAAGATTTTGTaGTTGGTCCCAAAGCCTATC +
Preference number: 5 (lower is better)
Translates to: ELRRWPWLPKTRGPSLTSSRKIL*LVPKPI
Trigger: GATAGGCTTTGGGACCAACAACAAAATCTTCCTGGA...GGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000357296.7
ENST00000476834.6
CDS-3UTR CAA 90 bp TGGTGTCTCAGCTCAAGTCAACCCTGGCCAGACTCCAATAACAGACACAAGAACAACTCCAGGAAGATTTaGTTGTTGGTCCCAAAGCCT +
Preference number: 5 (lower is better)
Translates to: WCLSSSQPWPDSNNRHKNNSRKI*LLVPKP
Trigger: AGGCTTTGGGACCAACAACAAAATCTTCCTGGAGTT...GTTCTTGTGTCTGTTATTGGAGTCTGGCCAGGGTTGACTTGAGCTGAGACACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278060.10
ENST00000357296.7
CDS-3UTR CAA 90 bp GAACTGAGAAGGTGGCCCTGGTTACCAAAAACCAGAGGACCCTCATTAACATCCAACTCCAGGAAGATTTaGTTGTTGGTCCCAAAGCCT +
Preference number: 5 (lower is better)
Translates to: ELRRWPWLPKTRGPSLTSNSRKI*LLVPKP
Trigger: AGGCTTTGGGACCAACAACAAAATCTTCCTGGAGTT...GGATGTTAATGAGGGTCCTCTGGTTTTTGGTAACCAGGGCCACCTTCTCAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000357296.7
ENST00000476834.6
CDS-3UTR CAA 90 bp ACCCTCATTAACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATTGGCCAATCTCCTTCTaGAGGTACTCCCCGACGCTG +
Preference number: 5 (lower is better)
Translates to: TLINIPKFQARLKSVRRNWPISF*RYSPTL
Trigger: CAGCGTCGGGGAGTACCTCAAGAAGGAGATTGGCCA...ATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTTAATGAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS-3UTR CAA 90 bp AACATCCCCAAATTTCAAGCCAGACTGAAATCTGTCAGAAGAAATGAGGGTCCCACACAGCATTCCAGGTaGAAGAAGGAGTTCAGGACG +
Preference number: 5 (lower is better)
Translates to: NIPKFQARLKSVRRNEGPTQHSR*KKEFRT
Trigger: CGTCCTGAACTCCTTCTTCAACCTGGAATGCTGTGT...GGGACCCTCATTTCTTCTGACAGATTTCAGTCTGGCTTGAAATTTGGGGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000480071.2
CDS GCA 72 bp CCTCCACCACGCCACCGAAGCAGCGCTCCGAGCGGATaGGGCCCCCGGCGCGGGCCGTGGCCTCCAGGACCC +
Preference number: 6 (lower is better)
Translates to: PPPRHRSSAPSG*GPRRGPWPPGP
Trigger: GGGTCCTGGAGGCCACGGCCCGCGCCGGGGGCCGCATCCGCTCGGAGCGCTGCTTCGGTGGCGTGGTGGAGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000480071.2
CDS CCA 72 bp GTGGCCTCCAGGACCCGCAGGTGCGGGAAGGCGGAGTaGCCGCAGAGCCTCTGCGCCGCGCCCAGCCCCGCG +
Preference number: 6 (lower is better)
Translates to: VASRTRRCGKAE*PQSLCAAPSPA
Trigger: CGCGGGGCTGGGCGCGGCGCAGAGGCTCTGCGGCCACTCCGCCTTCCCGCACCTGCGGGTCCTGGAGGCCAC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS CCA 72 bp AGCGCTCCGAGCGGATGCGGCCCCCGGCGCGGGCCGTaGCCTCCAGGACCCGCAGGTGCGGGAAGGCGGAGT +
Preference number: 6 (lower is better)
Translates to: SAPSGCGPRRGP*PPGPAGAGRRS
Trigger: ACTCCGCCTTCCCGCACCTGCGGGTCCTGGAGGCCACGGCCCGCGCCGGGGGCCGCATCCGCTCGGAGCGCT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000476834.6
ENST00000480071.2
ENST00000483211.6
ENST00000529585.5
CDS CCA 72 bp CCGCCACCAGCTGGAGGCTCACGCTGGCCCCGGAGCTaGCGTAGCTCACGGAGGGCAGGCCCACGTGACCCC +
Preference number: 6 (lower is better)
Translates to: PPPAGGSRWPRS*RSSRRAGPRDP
Trigger: GGGGTCACGTGGGCCTGCCCTCCGTGAGCTACGCCAGCTCCGGGGCCAGCGTGAGCCTCCAGCTGGTGGCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000368535.2
ENST00000480071.2
ENST00000528127.1
CDS CCA 72 bp GCCAGCTGGAAGACGGGGTTACCCCGGGAGGGCCCATaGATCCAGTGCGCGCCCACCTCCACCACGCCACCG +
Preference number: 6 (lower is better)
Translates to: ASWKTGLPREGP*IQCAPTSTTPP
Trigger: CGGTGGCGTGGTGGAGGTGGGCGCGCACTGGATCCATGGGCCCTCCCGGGGTAACCCCGTCTTCCAGCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000480071.2
CDS CCA 72 bp GCCAGCTGGAAGACGGGGTTACCCCGGGAGGGCCCATaGATCCAGTGCGCGCCCACCTCCACCACGCCACCC +
Preference number: 6 (lower is better)
Translates to: ASWKTGLPREGP*IQCAPTSTTPP
Trigger: GGGTGGCGTGGTGGAGGTGGGCGCGCACTGGATCCATGGGCCCTCCCGGGGTAACCCCGTCTTCCAGCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528127.1
CDS GCA 72 bp AAGACGGGGTTACCCCGGGAGGGCCCATGGATCCAGTaGGCGCCCACCTCCACCACGCCACCGAAGCAGCGC +
Preference number: 6 (lower is better)
Translates to: KTGLPREGPWIQ*APTSTTPPKQR
Trigger: GCGCTGCTTCGGTGGCGTGGTGGAGGTGGGCGCGCACTGGATCCATGGGCCCTCCCGGGGTAACCCCGTCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000480071.2
CDS CCA 72 bp GCCAGCTGGAAGACGGGGTTACCCCGGGAGGGCCCATaGATCCAGTGCGCGCCCACCTCCACCACGCCACTC +
Preference number: 6 (lower is better)
Translates to: ASWKTGLPREGP*IQCAPTSTTPL
Trigger: GAGTGGCGTGGTGGAGGTGGGCGCGCACTGGATCCATGGGCCCTCCCGGGGTAACCCCGTCTTCCAGCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368535.2
CDS TCA 72 bp CTGTCCAGCCGGCCACGTGCTGGCCAATCTCCTTCTTaGGGTACTCCCCGACGCTGGGCACCGGGGTCTCTG +
Preference number: 6 (lower is better)
Translates to: LSSRPRAGQSPS*GTPRRWAPGSL
Trigger: CAGAGACCCCGGTGCCCAGCGTCGGGGAGTACCTCAAGAAGGAGATTGGCCAGCACGTGGCCGGCTGGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000368535.2
ENST00000480071.2
ENST00000528127.1
CDS TCA 72 bp GGAGCCGTAGGTCGCCTTCCCTGGCCGGCGCCCTCCTaGCTAACTCTGAGCCCTGAGTTTCGGGGCGGTGAA +
Preference number: 6 (lower is better)
Translates to: GAVGRLPWPAPS*LTLSPEFRGGE
Trigger: TTCACCGCCCCGAAACTCAGGGCTCAGAGTTAGTCAGGAGGGCGCCGGCCAGGGAAGGCGACCTACGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528127.1
CDS CAA 90 bp TCCTCATCCTCTGTCCAGCCGGCCACGTGCTGGCCAATCTCCTTCTaGAGGTACTCCCCGACGCTGGGCACCGGGGTCTCTGCAGCGTGC +
Preference number: 6 (lower is better)
Translates to: SSSSVQPATCWPISF*RYSPTLGTGVSAAC
Trigger: GCACGCTGCAGAGACCCCGGTGCCCAGCGTCGGGGAGTACCTCAAGAAGGAGATTGGCCAGCACGTGGCCGGCTGGACAGAGGATGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000368535.2
ENST00000480071.2
ENST00000528127.1
CDS GCA 72 bp CTTGAGGTACTCCCCGACGCTGGGCACCGGGGTCTCTaGAGCGTGCAGGAACTCCCGGGTCTGGTCTATCAG +
Preference number: 6 (lower is better)
Translates to: LEVLPDAGHRGL*SVQELPGLVYQ
Trigger: CTGATAGACCAGACCCGGGAGTTCCTGCACGCTGCAGAGACCCCGGTGCCCAGCGTCGGGGAGTACCTCAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000368535.2
ENST00000480071.2
ENST00000528127.1
CDS CAA 72 bp TCTGTCCAGCCGGCCACGTGCTGGCCAATCTCCTTCTaGAGGTACTCCCCGACGCTGGGCACCGGGGTCTCT +
Preference number: 6 (lower is better)
Translates to: SVQPATCWPISF*RYSPTLGTGVS
Trigger: AGAGACCCCGGTGCCCAGCGTCGGGGAGTACCTCAAGAAGGAGATTGGCCAGCACGTGGCCGGCTGGACAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000368535.2
ENST00000480071.2
ENST00000528127.1
CDS TCA 72 bp CAGTGTCCTCCGGCAGGGCGGCCATCATGCAGTTTGTaGGTCCTTGATAGCCCCGAAGCAGCGCTCCGAGCG +
Preference number: 6 (lower is better)
Translates to: QCPPAGRPSCSL*VLDSPEAALRA
Trigger: CGCTCGGAGCGCTGCTTCGGGGCTATCAAGGACTCACAAACTGCATGATGGCCGCCCTGCCGGAGGACACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476834.6
ENST00000483211.6
ENST00000529585.5
CDS CCA 72 bp CTGGTCTCCTCATCCTCTGTCCAGCCGGCCACGTGCTaGCCAATCTCCTTCTTGAGGTACTCCCCGACGCTG +
Preference number: 6 (lower is better)
Translates to: LVSSSSVQPATC*PISFLRYSPTL
Trigger: CAGCGTCGGGGAGTACCTCAAGAAGGAGATTGGCCAGCACGTGGCCGGCTGGACAGAGGATGAGGAGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000368535.2
ENST00000480071.2
ENST00000528127.1
CDS GCA 72 bp TTCCTGGTCTCCTCATCCTCTGTCCAGCCGGCCACGTaGTGGCCAATCTCCTTCTTGAGGTACTCCCCGACG +
Preference number: 6 (lower is better)
Translates to: FLVSSSSVQPAT*WPISFLRYSPT
Trigger: CGTCGGGGAGTACCTCAAGAAGGAGATTGGCCAGCACGTGGCCGGCTGGACAGAGGATGAGGAGACCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000368535.2
ENST00000480071.2
ENST00000528127.1
CDS TCA 72 bp CCATGCTGTGGGTGCCGCTCACACAGCATTCCAGGTTaGAGAAGGAGTTCAGGACGGCCAGCTTCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: PCCGCRSHSIPG*RRSSGRPASAS
Trigger: GGAAGCTGAAGCTGGCCGTCCTGAACTCCTTCTTCAACCTGGAATGCTGTGTGAGCGGCACCCACAGCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278060.10
ENST00000356306.9
ENST00000357296.7
ENST00000368535.2
ENST00000480071.2
CDS GCA 72 bp CTAAGAAAACCTAAGGGCACGGTGACGATGACATGGTaGGCCGGGAACCGGTCTCCATCCTCACACTCTACC +
Preference number: 6 (lower is better)
Translates to: LRKPKGTVTMTW*AGNRSPSSHST
Trigger: GGTAGAGTGTGAGGATGGAGACCGGTTCCCGGCGCACCATGTCATCGTCACCGTGCCCTTAGGTTTTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000357296.7
ENST00000368535.2
CDS CCA 72 bp TCCCTAAGAAAACCTAAGGGCACGGTGACGATGACATaGTGCGCCGGGAACCGGTCTCCATCCTCACACTCT +
Preference number: 6 (lower is better)
Translates to: SLRKPKGTVTMT*CAGNRSPSSHS
Trigger: AGAGTGTGAGGATGGAGACCGGTTCCCGGCGCACCATGTCATCGTCACCGTGCCCTTAGGTTTTCTTAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278060.10
ENST00000357296.7
ENST00000368535.2