RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PANX2 (Homo sapiens)

Ensembl gene IDs: ENSG00000073150

Ensembl transcript IDs: ENST00000159647.9, ENST00000395842.3, ENST00000402472.2

Found 559 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAGCACAGGCCACGTCCACGCAGGGCTGGTGTCCACCGGGAGGCTaGCCAGGCCACACGACACAGGCAGAGGGGCTCTCGGCGGCCTGG +
Preference number: 1 (lower is better)
Translates to: EAQATSTQGWCPPGG*PGHTTQAEGLSAAW
Trigger: CCAGGCCGCCGAGAGCCCCTCTGCCTGTGTCGTGTGGCCTGGCCAGCCTCCCGGTGGACACCAGCCCTGCGTGGACGTGGCCTGTGCTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
3UTR GCA 90 bp TGCACCCCCGAGTCGCGCACCGTGGGGGTGGCGTCGTGGTTGGACTaGGCCAGCGCCGCCAGCAGCTGCCGGACCACGTTGTCGTACATG +
Preference number: 1 (lower is better)
Translates to: CTPESRTVGVASWLD*ASAASSCRTTLSYM
Trigger: CATGTACGACAACGTGGTCCGGCAGCTGCTGGCGGCGCTGGCGCAGTCCAACCACGACGCCACCCCCACGGTGCGCGACTCGGGGGTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CCA 90 bp GATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTaGTGTCCACCGGGAGGCTGGCCAGGCCACACGACACAGGCAGAG +
Preference number: 1 (lower is better)
Translates to: DARSAGEAQATSTQG*CPPGGWPGHTTQAE
Trigger: CTCTGCCTGTGTCGTGTGGCCTGGCCAGCCTCCCGGTGGACACCAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
3UTR CCA 90 bp CACCTCAGGGCCCCCACCCACGGCTGGGCACCTGATGCAGGAGCATaGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCC +
Preference number: 1 (lower is better)
Translates to: HLRAPTHGWAPDAGA*EAGFSLPGHRLHWA
Trigger: GGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGTGGGGGCCCTGAGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
3UTR CCA 90 bp AGTGGTGGGCGGAGCGGTCCAGCAGCGGCGCGATCAGCGTGTCCGTaGCCGTCTTCCTGCGCGCGGGCTTCGGCTTCTCCGCCTTGCTGT +
Preference number: 1 (lower is better)
Translates to: SGGRSGPAAARSACP*PSSCARASASPPCC
Trigger: ACAGCAAGGCGGAGAAGCCGAAGCCCGCGCGCAGGAAGACGGCCACGGACACGCTGATCGCGCCGCTGCTGGACCGCTCCGCCCACCACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR GCA 90 bp ACGCACAGCAGCACGATGTCCACGCCCGCGATGATGCGCTGCAGTTaGACGGACGGGAGCTTGCAGCTCACGCGCACCGCGGGCCCCGCA +
Preference number: 1 (lower is better)
Translates to: THSSTMSTPAMMRCS*TDGSLQLTRTAGPA
Trigger: TGCGGGGCCCGCGGTGCGCGTGAGCTGCAAGCTCCCGTCCGTGCAACTGCAGCGCATCATCGCGGGCGTGGACATCGTGCTGCTGTGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR GCA 90 bp AGCGGTCCAGCAGCGGCGCGATCAGCGTGTCCGTGGCCGTCTTCCTaGGCGCGGGCTTCGGCTTCTCCGCCTTGCTGTTCTCCACGCGCA +
Preference number: 1 (lower is better)
Translates to: SGPAAARSACPWPSS*ARASASPPCCSPRA
Trigger: TGCGCGTGGAGAACAGCAAGGCGGAGAAGCCGAAGCCCGCGCGCAGGAAGACGGCCACGGACACGCTGATCGCGCCGCTGCTGGACCGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CCA 90 bp TGTCGAGCACGTGGGGGCGAAGGCCCCAGGCATGCGGACAGAGGTTaGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCA +
Preference number: 1 (lower is better)
Translates to: CRARGGEGPRHADRG*GCAQCGRSTGHVHA
Trigger: TGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCGCCCCCACGTGCTCGACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
3UTR CCA 90 bp GCGCGTAGGGCAGGAACTTGTGCTCAAACAGCGACGGCCACAGGCTaGCGTCCACGCCGGGCAGCGCGTCCCGCAGCTCCGTCCAGCAGT +
Preference number: 1 (lower is better)
Translates to: ARRAGTCAQTATATG*RPRRAARPAAPSSS
Trigger: ACTGCTGGACGGAGCTGCGGGACGCGCTGCCCGGCGTGGACGCCAGCCTGTGGCCGTCGCTGTTTGAGCACAAGTTCCTGCCCTACGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CCA 90 bp ATGATCTCGCGCTTCTCGCGCTCCGTGATGCCCGGGCCCTTGGACTaGATCTGCTTCTCGATCTTGGGCGCGCGGCCCTCGGCCGCCCGG +
Preference number: 1 (lower is better)
Translates to: MISRFSRSVMPGPLD*ICFSILGARPSAAR
Trigger: CCGGGCGGCCGAGGGCCGCGCGCCCAAGATCGAGAAGCAGATCCAGTCCAAGGGCCCGGGCATCACGGAGCGCGAGAAGCGCGAGATCAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR GCA 90 bp GACATGGTCTCCATGGCTGAGGTATTTGGGGTGGGACCAGCCGGGTaGCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCAGCCGCGG +
Preference number: 1 (lower is better)
Translates to: DMVSMAEVFGVGPAG*RPGLPQEAMWPQPR
Trigger: CCGCGGCTGAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTGGTCCCACCCCAAATACCTCAGCCATGGAGACCATGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR GCA 90 bp TTCATGACGCACAGCAGCACGATGTCCACGCCCGCGATGATGCGCTaGAGTTGCACGGACGGGAGCTTGCAGCTCACGCGCACCGCGGGC +
Preference number: 1 (lower is better)
Translates to: FMTHSSTMSTPAMMR*SCTDGSLQLTRTAG
Trigger: GCCCGCGGTGCGCGTGAGCTGCAAGCTCCCGTCCGTGCAACTGCAGCGCATCATCGCGGGCGTGGACATCGTGCTGCTGTGCGTCATGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CCA 90 bp GTGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATaGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCA +
Preference number: 1 (lower is better)
Translates to: VGDVVIALGPFTPHT*ATRWRALTHSPACS
Trigger: TGAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR GCA 90 bp AAGTTGCTGCGGCCGCGGCGCTCCAGGTACTTCTCGAACAGGTTCTaGTCCGGGCTCTTCTCCTTCTCCGCGTTCTCGATGATCTCGCGC +
Preference number: 1 (lower is better)
Translates to: KLLRPRRSRYFSNRF*SGLFSFSAFSMISR
Trigger: GCGCGAGATCATCGAGAACGCGGAGAAGGAGAAGAGCCCGGAGCAGAACCTGTTCGAGAAGTACCTGGAGCGCCGCGGCCGCAGCAACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR GCA 90 bp CGGTTCTCGTTGCAGAACATGGCCAGGATGTTGATGTCGCAGAACTaGGAGCGGCGCCACTGCCGGCGCGTCTTGATGCCCACCTTGTGC +
Preference number: 1 (lower is better)
Translates to: RFSLQNMARMLMSQN*ERRHCRRVLMPTLC
Trigger: GCACAAGGTGGGCATCAAGACGCGCCGGCAGTGGCGCCGCTCGCAGTTCTGCGACATCAACATCCTGGCCATGTTCTGCAACGAGAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR GCA 90 bp AACATGGCCAGGATGTTGATGTCGCAGAACTGCGAGCGGCGCCACTaGCGGCGCGTCTTGATGCCCACCTTGTGCAGCTTGTCGAAGATG +
Preference number: 1 (lower is better)
Translates to: NMARMLMSQNCERRH*RRVLMPTLCSLSKM
Trigger: CATCTTCGACAAGCTGCACAAGGTGGGCATCAAGACGCGCCGGCAGTGGCGCCGCTCGCAGTTCTGCGACATCAACATCCTGGCCATGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR GCA 90 bp AACTGCGAGCGGCGCCACTGCCGGCGCGTCTTGATGCCCACCTTGTaGAGCTTGTCGAAGATGAAGTTGCTCTTGCGGAAGATGAAGAGG +
Preference number: 1 (lower is better)
Translates to: NCERRHCRRVLMPTL*SLSKMKLLLRKMKR
Trigger: CCTCTTCATCTTCCGCAAGAGCAACTTCATCTTCGACAAGCTGCACAAGGTGGGCATCAAGACGCGCCGGCAGTGGCGCCGCTCGCAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR TCA 90 bp ATAAAATGTCTGTCAGGCGACAAGGAGAAAGTGCACGTTGACCTTTaGCCCGAGGGTGGACCTCGGTCCCTCCCACCCGAGGGCATCAGG +
Preference number: 1 (lower is better)
Translates to: IKCLSGDKEKVHVDL*PEGGPRSLPPEGIR
Trigger: CCTGATGCCCTCGGGTGGGAGGGACCGAGGTCCACCCTCGGGTCAAAGGTCAACGTGCACTTTCTCCTTGTCGCCTGACAGACATTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR TCA 90 bp GCTCCGTCCAGCAGTAGCCGCGGGCGTACAGCGCCTGGTCGCGCGTaGAGTTGTGCGGGGTGTAACAGTAAATGGGTTCCTTTATGTTTT +
Preference number: 1 (lower is better)
Translates to: APSSSSRGRTAPGRA*SCAGCNSKWVPLCF
Trigger: AAAACATAAAGGAACCCATTTACTGTTACACCCCGCACAACTTCACGCGCGACCAGGCGCTGTACGCCCGCGGCTACTGCTGGACGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CCA 90 bp TCGCTCTCGTTGGTGATGAAGTCCAGCCGGTTGAGCGACTTGATGTaGTCGCGGTTCTCGTTGCAGAACATGGCCAGGATGTTGATGTCG +
Preference number: 1 (lower is better)
Translates to: SLSLVMKSSRLSDLM*SRFSLQNMARMLMS
Trigger: CGACATCAACATCCTGGCCATGTTCTGCAACGAGAACCGCGACCACATCAAGTCGCTCAACCGGCTGGACTTCATCACCAACGAGAGCGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CCA 90 bp TGCAGCTTGTCGAAGATGAAGTTGCTCTTGCGGAAGATGAAGAGGTaGATGAGGTTGACGAGGATGATGAGGTTCATGACGCACAGCAGC +
Preference number: 1 (lower is better)
Translates to: CSLSKMKLLLRKMKR*MRLTRMMRFMTHSS
Trigger: GCTGCTGTGCGTCATGAACCTCATCATCCTCGTCAACCTCATCCACCTCTTCATCTTCCGCAAGAGCAACTTCATCTTCGACAAGCTGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR GCA 90 bp GCTCACGCTCACCTCTGCTCATGCCCGTTCACACACACACCATCCTaGTTTAAACCCATCCTGTCTCCTGATGATAAATATGCTTGTTCG +
Preference number: 1 (lower is better)
Translates to: AHAHLCSCPFTHTPS*FKPILSPDDKYACS
Trigger: CGAACAAGCATATTTATCATCAGGAGACAGGATGGGTTTAAAGCAGGATGGTGTGTGTGTGAACGGGCATGAGCAGAGGTGAGCGTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR CCA 90 bp CAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCAGCCGCGGCCTGGGGGAGCTGGGCTaGGGGAGTTGGGCTGTCTCG +
Preference number: 2 (lower is better)
Translates to: QPGAGRGSHRKPCGLSRGLGELG*GSWAVS
Trigger: CGAGACAGCCCAACTCCCCCAGCCCAGCTCCCCCAG...GCCGCGGCTGAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR CAA 90 bp ATGTCCACGCCCGCGATGATGCGCTGCAGTTGCACGGACGGGAGCTaGCAGCTCACGCGCACCGCGGGCCCCGCACCTGCCGCCCCGTCC +
Preference number: 2 (lower is better)
Translates to: MSTPAMMRCSCTDGS*QLTRTAGPAPAAPS
Trigger: GGACGGGGCGGCAGGTGCGGGGCCCGCGGTGCGCGTGAGCTGCAAGCTCCCGTCCGTGCAACTGCAGCGCATCATCGCGGGCGTGGACAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR GCA 90 bp CCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCTGGCCAGGAAGTTGCTaGGGCCGCGGCGCTCCAGGT +
Preference number: 2 (lower is better)
Translates to: PGDAVRAGSPVEHVGAKAWPGSC*GRGAPG
Trigger: ACCTGGAGCGCCGCGGCCGCAGCAACTTCCTGGCCA...GGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CCA 90 bp CAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCAGCCGCGGCGGGCTCTCGGCGGCCTaGACGGTGCCATCCCTCAAA +
Preference number: 2 (lower is better)
Translates to: QPGAGRGSHRKPCGLSRGGLSAA*TVPSLK
Trigger: TTTGAGGGATGGCACCGTCCAGGCCGCCGAGAGCCC...GCCGCGGCTGAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000159647.9
3UTR-3UTR CCA 90 bp GGACCAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCAGCCGGTGACCCCATGGGCGTaGCCACCCCACTGGTGGGAC +
Preference number: 2 (lower is better)
Translates to: GPAGCRPGLPQEAMWPQPVTPWA*PPHWWD
Trigger: GTCCCACCAGTGGGGTGGCCACGCCCATGGGGTCAC...CGGCTGAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTGGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR TCA 90 bp CCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCCGCCCAGCGCGCAGGTaGACTCGTTCTGCTTCTGCG +
Preference number: 2 (lower is better)
Translates to: PGDAVRAGSPVEHVGAKARPARR*TRSASA
Trigger: CGCAGAAGCAGAACGAGTTCACCTGCGCGCTGGGCG...GGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CCA 90 bp CTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCCTGTCCACCGGGAGGCTaGCCAGGCCACACGACACAG +
Preference number: 2 (lower is better)
Translates to: LAMPSGRVPLSSTWGRRPCPPGG*PGHTTQ
Trigger: CTGTGTCGTGTGGCCTGGCCAGCCTCCCGGTGGACA...GGGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
3UTR CAA 90 bp GACGCACAGCAGCACGATGTCCACGCCCGCGATGATGCGCTGCAGTaGCACGGACGGGAGCTTGCAGCTCACGCGCACCGCGGGCCCCGC +
Preference number: 2 (lower is better)
Translates to: DAQQHDVHARDDALQ*HGRELAAHAHRGPR
Trigger: GCGGGGCCCGCGGTGCGCGTGAGCTGCAAGCTCCCGTCCGTGCAACTGCAGCGCATCATCGCGGGCGTGGACATCGTGCTGCTGTGCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CAA 90 bp AAGGGCTGCGGAAGCGGGTTGCTGGTGGGGATCCACTTCATCTTCTaGCGCGGCCGCTTGACCACGGGCGGCTCGGCGGCGCCGTCGGGC +
Preference number: 2 (lower is better)
Translates to: KGCGSGLLVGIHFIF*RGRLTTGGSAAPSG
Trigger: GCCCGACGGCGCCGCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGAAGATGAAGTGGATCCCCACCAGCAACCCGCTTCCGCAGCCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR TCA 90 bp GGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCGGAGCGGAGCATCTTTaGTGGGCGCCGGGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: GAWEAGFSLPGHRLHWATGAEHL*WAPGPG
Trigger: GCCTGGCCCCGGCGCCCATCAAAGATGCTCCGCTCC...GGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR GCA 90 bp CTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCCCGGCGGCCTGGACGGTaGCATCCCTCAAAACTCCAC +
Preference number: 2 (lower is better)
Translates to: LAMPSGRVPLSSTWGRRPRRPGR*HPSKLH
Trigger: GTGGAGTTTTGAGGGATGGCACCGTCCAGGCCGCCG...GGGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000402472.2
3UTR-3UTR GCA 90 bp CCACCCCAGCCAGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGACAGAGGTTGGGGATaGGCGCAGTGCGGGCGAAGC +
Preference number: 2 (lower is better)
Translates to: PPQPVPGDAVRAGSPVEHDRGWG*AQCGRS
Trigger: GCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTC...GTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
3UTR-3UTR CCA 90 bp CACCCCAGCCAGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGCATGCGGACAGAGGTTaGGGATGCGCGCAGTGCGGG +
Preference number: 2 (lower is better)
Translates to: HPSQCLAMPSGRVPLSSTHADRG*GCAQCG
Trigger: CCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATG...CGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
3UTR-3UTR TCA 90 bp AGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGCGCCTGGTCGCGCGTaGAGTTGTGCGGGGTGTAAC +
Preference number: 2 (lower is better)
Translates to: SAWRCRPGGFPCRARGGEAPGRA*SCAGCN
Trigger: GTTACACCCCGCACAACTTCACGCGCGACCAGGCGC...TTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR GCA 90 bp GATGCGCTGCAGTTGCACGGACGGGAGCTTGCAGCTCACGCGCACCGCGGGCCCGACAGAGGTTGGGGATaGGCGCAGTGCGGGCGAAGC +
Preference number: 2 (lower is better)
Translates to: DALQLHGRELAAHAHRGPDRGWG*AQCGRS
Trigger: GCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTC...GGGCCCGCGGTGCGCGTGAGCTGCAAGCTCCCGTCCGTGCAACTGCAGCGCATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR GCA 90 bp ATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGGCCAGTGCCTGGCGATaGCGTCCGGGCGGGTTCCCC +
Preference number: 2 (lower is better)
Translates to: MQEHGKRASAFLATGSTGASAWR*RPGGFP
Trigger: GGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGC...CCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCCTGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
3UTR-3UTR GCA 90 bp CTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCCCCACCCCAGCCAGTaGCTGGCGATGCCGTCCGGG +
Preference number: 2 (lower is better)
Translates to: LHSSYMGHALACTHALARPHPSQ*LAMPSG
Trigger: CCCGGACGGCATCGCCAGGCACTGGCTGGGGTGGGG...GCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR GCA 90 bp GCAGCGGCGCGATCAGCGTGTCCGTGGCCGTCTTCCTGCGCGCGGGCTTCGGCTGGCTCCTTGAAGGGCTaGGGAAGCGGGTTGCTGGTG +
Preference number: 2 (lower is better)
Translates to: AAARSACPWPSSCARASAGSLKG*GSGLLV
Trigger: CACCAGCAACCCGCTTCCGCAGCCCTTCAAGGAGCC...AGCCGAAGCCCGCGCGCAGGAAGACGGCCACGGACACGCTGATCGCGCCGCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CCA 90 bp AGGGCCCCCACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCACGTCCACGCAGGGCTaGTGTCCACCGGGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: RAPTHGWAPDAGAWEAGFTSTQG*CPPGGW
Trigger: CCAGCCTCCCGGTGGACACCAGCCCTGCGTGGACGT...GAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGTGGGGGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
3UTR-3UTR CCA 90 bp GGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCGCCCCCACCCACGGCTaGGCACCTGATGCAGGAGCA +
Preference number: 2 (lower is better)
Translates to: GAWEAGFSLPGHRLHWATAPTHG*APDAGA
Trigger: TGCTCCTGCATCAGGTGCCCAGCCGTGGGTGGGGGC...GGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
3UTR-3UTR CCA 90 bp CAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCAGCCGCGGCTTCACTCCTCATACATaGGCCACGCGCTGGCGTGCA +
Preference number: 2 (lower is better)
Translates to: QPGAGRGSHRKPCGLSRGFTPHT*ATRWRA
Trigger: TGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAA...GCCGCGGCTGAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR CCA 90 bp TGTAGGGGTGCACGTCCAGGGAGAAGTGGCGCGCGTGCTTCTTGTCAGGGGCGGCGGGCTCGGCGGGGTTaGCGCTGGGGTCCACGGTCT +
Preference number: 2 (lower is better)
Translates to: CRGARPGRSGARASCQGRRARRG*RWGPRS
Trigger: AGACCGTGGACCCCAGCGCCAACCCCGCCGAGCCCG...CCGCCCCTGACAAGAAGCACGCGCGCCACTTCTCCCTGGACGTGCACCCCTACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR GCA 90 bp CTTCTTGCGCGGCCGCTTGACCACGGGCGGCTCGGCGGCGCCGTCGGGCTCGGCCAGTTGTCGATCTCCTaGAGCAGGAAGTTGAGCTCG +
Preference number: 2 (lower is better)
Translates to: LLARPLDHGRLGGAVGLGQLSIS*SRKLSS
Trigger: CGAGCTCAACTTCCTGCTGCAGGAGATCGACAACTG...GCCGAGCCCGACGGCGCCGCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR GCA 90 bp CCACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGGGTCCACGGTCTaGACCCCCGAGTCGCGCACC +
Preference number: 2 (lower is better)
Translates to: PPTAGHLMQEHGKRASAFLGSTV*TPESRT
Trigger: GGTGCGCGACTCGGGGGTGCAGACCGTGGACCCCAG...GAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CCA 90 bp GGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTGTCCACCGGGAGGCTaGCCAGGCCACACGACACAG +
Preference number: 2 (lower is better)
Translates to: GAWEAGFSLPGHRLHWATCPPGG*PGHTTQ
Trigger: CTGTGTCGTGTGGCCTGGCCAGCCTCCCGGTGGACA...GGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
3UTR-3UTR CCA 90 bp GATCAGCGTGTCCGTGGCCGTCTTCCTGCGCGCGGGCTTCGGCTTCTCCGCCTTGCCCCCACCCACGGCTaGGCACCTGATGCAGGAGCA +
Preference number: 2 (lower is better)
Translates to: DQRVRGRLPARGLRLLRLAPTHG*APDAGA
Trigger: TGCTCCTGCATCAGGTGCCCAGCCGTGGGTGGGGGC...AAGGCGGAGAAGCCGAAGCCCGCGCGCAGGAAGACGGCCACGGACACGCTGATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CCA 90 bp TCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCGTGACCCCATGGGCGTaGCCACCCCACTGGTGGGAC +
Preference number: 2 (lower is better)
Translates to: SSYMGHALACTHALARLLVTPWA*PPHWWD
Trigger: GTCCCACCAGTGGGGTGGCCACGCCCATGGGGTCAC...GAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR CCA 90 bp GGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCGAGCATGTGACCCCATaGGCGTGGCCACCCCACTGG +
Preference number: 2 (lower is better)
Translates to: GAWEAGFSLPGHRLHWATEHVTP*AWPPHW
Trigger: CCAGTGGGGTGGCCACGCCCATGGGGTCACATGCTC...GGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR CAA 90 bp GTGTCCGTGGCCGTCTTCCTGCGCGCGGGCTTCGGCTTCTCCGCCTaGCTGTTCTCCACGCGCATGATGGCCAGCGGCTCCTTGAAGGGC +
Preference number: 2 (lower is better)
Translates to: VSVAVFLRAGFGFSA*LFSTRMMASGSLKG
Trigger: GCCCTTCAAGGAGCCGCTGGCCATCATGCGCGTGGAGAACAGCAAGGCGGAGAAGCCGAAGCCCGCGCGCAGGAAGACGGCCACGGACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR TCA 90 bp ATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCGCGCGGGCACGTACATaGTGGCGGCGAAGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: MGSGLQPSWPPAPLGHLSARART*WRRRPA
Trigger: TGCTGGCCTTCGCCGCCATCATGTACGTGCCCGCGC...GGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR GCA 90 bp GCGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGTGGGGATGCGCGCAGTaGGGGCGAAGCACAGGCCAC +
Preference number: 2 (lower is better)
Translates to: ALGPFTPHTWATRWRALTWGCAQ*GRSTGH
Trigger: GTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCA...CGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR GCA 90 bp CCACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCTGGGGATGCGCGCAGTaGGGGCGAAGCACAGGCCAC +
Preference number: 2 (lower is better)
Translates to: PPTAGHLMQEHGKRASAFWGCAQ*GRSTGH
Trigger: GTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCA...GAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
3UTR-3UTR GCA 90 bp GGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCCGAAGGCCCCAGGCATaGGGACAGAGGTTGGGGATG +
Preference number: 2 (lower is better)
Translates to: GAWEAGFSLPGHRLHWATRRPQA*GQRLGM
Trigger: CATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCG...GGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
3UTR-3UTR GCA 90 bp GCCAGCGGCTCCTTGAAGGGCTGCGGAAGCGGGTTGCTGGTGGGGATCCACTTCGCTTGGCCAGGAAGTTaGTGCGGCCGCGGCGCTCCA +
Preference number: 2 (lower is better)
Translates to: ASGSLKGCGSGLLVGIHFAWPGS*CGRGAP
Trigger: TGGAGCGCCGCGGCCGCAGCAACTTCCTGGCCAAGC...GAAGTGGATCCCCACCAGCAACCCGCTTCCGCAGCCCTTCAAGGAGCCGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR GCA 90 bp GGGAAGCCCTGCCCGGGCTGGCTCTGTGGGGTACGGGATTTCCTTCTCGGGGAGGAGAAGTGGCGCGCGTaGTTCTTGTCAGGGGCGGGC +
Preference number: 2 (lower is better)
Translates to: GKPCPGWLCGVRDFLLGEEKWRA*FLSGAG
Trigger: GCCCGCCCCTGACAAGAAGCACGCGCGCCACTTCTC...CTCCCCGAGAAGGAAATCCCGTACCCCACAGAGCCAGCCCGGGCAGGGCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CCA 90 bp CACCCCAGCCAGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGCCTGATGCAGGAGCATaGGAAGCGGGCTTCAGCCTT +
Preference number: 2 (lower is better)
Translates to: HPSQCLAMPSGRVPLSSTPDAGA*EAGFSL
Trigger: AAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGG...CGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
3UTR-3UTR CCA 90 bp AAGTTGAGCTCGGAGGTGAGGCGCGTGGAGGCCAGGAACTCCCAGCCCAGCGCGCGGGCGTACAGCGCCTaGTCGCGCGTGAAGTTGTGC +
Preference number: 2 (lower is better)
Translates to: KLSSEVRRVEARNSQPSARAYSA*SRVKLC
Trigger: GCACAACTTCACGCGCGACCAGGCGCTGTACGCCCG...CGCGCTGGGCTGGGAGTTCCTGGCCTCCACGCGCCTCACCTCCGAGCTCAACTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CAA 90 bp TTCTCGATGATCTCGCGCTTCTCGCGCTCCGTGATGCCCGGGCCCTaGGACTGGATCTGCTTCTCGATCTTGGGCGCGCGGCCCTCGGCC +
Preference number: 2 (lower is better)
Translates to: FSMISRFSRSVMPGP*DWICFSILGARPSA
Trigger: GGCCGAGGGCCGCGCGCCCAAGATCGAGAAGCAGATCCAGTCCAAGGGCCCGGGCATCACGGAGCGCGAGAAGCGCGAGATCATCGAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR GCA 90 bp ATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCGACAGAGGTTGGGGATaGGCGCAGTGCGGGCGAAGC +
Preference number: 2 (lower is better)
Translates to: MGSGLQPSWPPAPLGHLSDRGWG*AQCGRS
Trigger: GCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTC...GGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
3UTR-3UTR GCA 90 bp TGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCCCCCACCCCAGCCAGTaGCTGGCGATGCCGTCCGGG +
Preference number: 2 (lower is better)
Translates to: WGTWLLRWAPSLLIHGPRPHPSQ*LAMPSG
Trigger: CCCGGACGGCATCGCCAGGCACTGGCTGGGGTGGGG...GCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR GCA 90 bp GGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCGCACCACACCCTCTGTaGACACGCACACACGTGCAC +
Preference number: 2 (lower is better)
Translates to: GAWEAGFSLPGHRLHWATAPHPL*TRTHVH
Trigger: GTGCACGTGTGTGCGTGTGCACAGAGGGTGTGGTGC...GGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR GCA 90 bp GATCAGCGTGTCCGTGGCCGTCTTCCTGCGCGCGGGCTTCGGCTTCTCCGCCTTTTGATGTCGCAGAACTaGGAGCGGCGCCACTGCCGG +
Preference number: 2 (lower is better)
Translates to: DQRVRGRLPARGLRLLRLLMSQN*ERRHCR
Trigger: CCGGCAGTGGCGCCGCTCGCAGTTCTGCGACATCAA...AAGGCGGAGAAGCCGAAGCCCGCGCGCAGGAAGACGGCCACGGACACGCTGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CCA 90 bp CGCGTTCTCGATGATCTCGCGCTTCTCGCGCTCCGTGATGCCCGGGCCCTTGGAGGGCTCTCGGCGGCCTaGACGGTGCCATCCCTCAAA +
Preference number: 2 (lower is better)
Translates to: RVLDDLALLALRDARALGGLSAA*TVPSLK
Trigger: TTTGAGGGATGGCACCGTCCAGGCCGCCGAGAGCCC...TCCAAGGGCCCGGGCATCACGGAGCGCGAGAAGCGCGAGATCATCGAGAACGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CCA 90 bp GCGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCATGCGGACAGAGGTTaGGGATGCGCGCAGTGCGGG +
Preference number: 2 (lower is better)
Translates to: ALGPFTPHTWATRWRALTHADRG*GCAQCG
Trigger: CCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATG...CGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR CCA 90 bp TCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTCCCCACTGGTGGGACTaGCCCCACCTTCCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: SLLIHGPRAGVHSRTRPPPHWWD*PHLPLP
Trigger: GGGAAGAGGAAGGTGGGGCCAGTCCCACCAGTGGGG...AGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR GCA 90 bp ATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCGGCGGCCTGGACGGTaGCATCCCTCAAAACTCCAC +
Preference number: 2 (lower is better)
Translates to: MQEHGKRASAFLATGSTGRRPGR*HPSKLH
Trigger: GTGGAGTTTTGAGGGATGGCACCGTCCAGGCCGCCG...CCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCCTGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000402472.2
3UTR-3UTR GCA 90 bp AGTTGCTGCGGCCGCGGCGCTCCAGGTACTTCTCGAACAGGTTCTGCTCCGGGCCGAAGGCCCCAGGCATaGGGACAGAGGTTGGGGATG +
Preference number: 2 (lower is better)
Translates to: SCCGRGAPGTSRTGSAPGRRPQA*GQRLGM
Trigger: CATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCG...GCCCGGAGCAGAACCTGTTCGAGAAGTACCTGGAGCGCCGCGGCCGCAGCAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR GCA 90 bp GGTGGGGATCCACTTCATCTTCTTGCGCGGCCGCTTGACCACGGGCGGCTCGGCAGCAGGATCAGCACGTaGCGCGCCAGGTACAGCTTG +
Preference number: 2 (lower is better)
Translates to: GGDPLHLLARPLDHGRLGSRIST*RARYSL
Trigger: CAAGCTGTACCTGGCGCGGCACGTGCTGATCCTGCT...GCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGAAGATGAAGTGGATCCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR GCA 90 bp CACTTCATCTTCTTGCGCGGCCGCTTGACCACGGGCGGCTCGGCGGCGCCGTCGGGTCGCGGTTCTCGTTaGAGAACATGGCCAGGATGT +
Preference number: 2 (lower is better)
Translates to: HFIFLRGRLTTGGSAAPSGRGSR*RTWPGC
Trigger: ACATCCTGGCCATGTTCTGCAACGAGAACCGCGACC...CGACGGCGCCGCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGAAGATGAAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CCA 90 bp GGGCCCGGGTGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATCCTCTTCCCTGGCTCTaGGCTGGGGGAGCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: GPGWGTWLLRWAPSLLIHPLPWL*AGGAGL
Trigger: CAGCCCAGCTCCCCCAGCCCAGAGCCAGGGAAGAGG...ATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCACCCGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR CCA 90 bp CACTTCATCTTCTTGCGCGGCCGCTTGACCACGGGCGGCTCGGCGGCGCCGTCGCGTTCTGCTTCTGCGTaGCGTAGTAGGTGCACAGGT +
Preference number: 2 (lower is better)
Translates to: HFIFLRGRLTTGGSAAPSRSASA*RSRCTG
Trigger: ACCTGTGCACCTACTACGCCACGCAGAAGCAGAACG...CGACGGCGCCGCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGAAGATGAAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR TCA 90 bp CTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCACGGAGAAAGTGCACGTTaGCCTTTGACCCGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: LIHGPRAGVHSRTRPPAHGESAR*PLTRGW
Trigger: CCACCCTCGGGTCAAAGGTCAACGTGCACTTTCTCC...GTGAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR GCA 90 bp TGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCTGGGGATGCGCGCAGTaGGGGCGAAGCACAGGCCAC +
Preference number: 2 (lower is better)
Translates to: WGTWLLRWAPSLLIHGPRWGCAQ*GRSTGH
Trigger: GTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCA...GCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR CCA 90 bp CGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTGGCCACCCCACTGGTaGGACTGGCCCCACCTTCCT +
Preference number: 2 (lower is better)
Translates to: RGYCVGPLHSSYMGHALAWPPHW*DWPHLP
Trigger: AGGAAGGTGGGGCCAGTCCCACCAGTGGGGTGGCCA...CGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR CCA 90 bp GGGCCCGGGTGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATCCTTTGACCCGAGGGTaGACCTCGGTCCCTCCCACC +
Preference number: 2 (lower is better)
Translates to: GPGWGTWLLRWAPSLLIHPLTRG*TSVPPT
Trigger: GGTGGGAGGGACCGAGGTCCACCCTCGGGTCAAAGG...ATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCACCCGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR CCA 90 bp GATCAGCGTGTCCGTGGCCGTCTTCCTGCGCGCGGGCTTCGGCTTCTCCGCCTTCCCGGGCCCTTGGACTaGATCTGCTTCTCGATCTTG +
Preference number: 2 (lower is better)
Translates to: DQRVRGRLPARGLRLLRLPGPLD*ICFSIL
Trigger: CAAGATCGAGAAGCAGATCCAGTCCAAGGGCCCGGG...AAGGCGGAGAAGCCGAAGCCCGCGCGCAGGAAGACGGCCACGGACACGCTGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CAA 90 bp TTCTCCGCCTTGCTGTTCTCCACGCGCATGATGGCCAGCGGCTCCTaGAAGGGCTGCGGAAGCGGGTTGCTGGTGGGGATCCACTTCATC +
Preference number: 2 (lower is better)
Translates to: FSALLFSTRMMASGS*KGCGSGLLVGIHFI
Trigger: GATGAAGTGGATCCCCACCAGCAACCCGCTTCCGCAGCCCTTCAAGGAGCCGCTGGCCATCATGCGCGTGGAGAACAGCAAGGCGGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR GCA 90 bp ACGCTCACCTCTGCTCATGCCCGTTCACACACACACCATCCTGCTTTAAACCCAGCCAGTGCCTGGCGATaGCGTCCGGGCGGGTTCCCC +
Preference number: 2 (lower is better)
Translates to: TLTSAHARSHTHHPALNPASAWR*RPGGFP
Trigger: GGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGC...TGGGTTTAAAGCAGGATGGTGTGTGTGTGAACGGGCATGAGCAGAGGTGAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR CAA 90 bp GACTTGATGTGGTCGCGGTTCTCGTTGCAGAACATGGCCAGGATGTaGATGTCGCAGAACTGCGAGCGGCGCCACTGCCGGCGCGTCTTG +
Preference number: 2 (lower is better)
Translates to: DLMWSRFSLQNMARM*MSQNCERRHCRRVL
Trigger: CAAGACGCGCCGGCAGTGGCGCCGCTCGCAGTTCTGCGACATCAACATCCTGGCCATGTTCTGCAACGAGAACCGCGACCACATCAAGTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CAA 90 bp GCCAGCAGCTGCCGGACCACGTTGTCGTACATGAGGTCGCTCTCGTaGGTGATGAAGTCCAGCCGGTTGAGCGACTTGATGTGGTCGCGG +
Preference number: 2 (lower is better)
Translates to: ASSCRTTLSYMRSLS*VMKSSRLSDLMWSR
Trigger: CCGCGACCACATCAAGTCGCTCAACCGGCTGGACTTCATCACCAACGAGAGCGACCTCATGTACGACAACGTGGTCCGGCAGCTGCTGGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR TCA 90 bp TCGTACATGAGGTCGCTCTCGTTGGTGATGAAGTCCAGCCGGTTGAGCGACTTGGCTTCTCGCGCTCCGTaGTGCCCGGGCCCTTGGACT +
Preference number: 2 (lower is better)
Translates to: SYMRSLSLVMKSSRLSDLASRAP*CPGPWT
Trigger: AGTCCAAGGGCCCGGGCATCACGGAGCGCGAGAAGC...CAAGTCGCTCAACCGGCTGGACTTCATCACCAACGAGAGCGACCTCATGTACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR TCA 90 bp CCTGCCCGGGCTGGCTCTGTGGGGTACGGGATTTCCTTCTCGGGGAGCGGAGCAGCAGCTTGTCGAAGATaGAGTTGCTCTTGCGGAAGA +
Preference number: 2 (lower is better)
Translates to: PARAGSVGYGISFSGSGAAACRR*SCSCGR
Trigger: TCTTCCGCAAGAGCAACTTCATCTTCGACAAGCTGC...TGCTCCGCTCCCCGAGAAGGAAATCCCGTACCCCACAGAGCCAGCCCGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CCA 90 bp GGGCCCGGGTGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATCCTGATGCAGGAGCATaGGAAGCGGGCTTCAGCCTT +
Preference number: 2 (lower is better)
Translates to: GPGWGTWLLRWAPSLLIHPDAGA*EAGFSL
Trigger: AAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGG...ATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCACCCGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR CCA 90 bp TTGTCGTACATGAGGTCGCTCTCGTTGGTGATGAAGTCCAGCCGGTTGAGCGACTCTGCTTCTCGATCTTaGGCGCGCGGCCCTCGGCCG +
Preference number: 2 (lower is better)
Translates to: LSYMRSLSLVMKSSRLSDSASRS*ARGPRP
Trigger: CGGCCGAGGGCCGCGCGCCCAAGATCGAGAAGCAGA...GTCGCTCAACCGGCTGGACTTCATCACCAACGAGAGCGACCTCATGTACGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR GCA 90 bp GTCGAAGATGAAGTTGCTCTTGCGGAAGATGAAGAGGTGGATGAGGTTGACGAGCCCCACCCCAGCCAGTaGCTGGCGATGCCGTCCGGG +
Preference number: 2 (lower is better)
Translates to: VEDEVALAEDEEVDEVDEPHPSQ*LAMPSG
Trigger: CCCGGACGGCATCGCCAGGCACTGGCTGGGGTGGGG...CTCGTCAACCTCATCCACCTCTTCATCTTCCGCAAGAGCAACTTCATCTTCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CAA 90 bp GAGCGGCGCCACTGCCGGCGCGTCTTGATGCCCACCTTGTGCAGCTaGTCGAAGATGAAGTTGCTCTTGCGGAAGATGAAGAGGTGGATG +
Preference number: 2 (lower is better)
Translates to: ERRHCRRVLMPTLCS*SKMKLLLRKMKRWM
Trigger: CATCCACCTCTTCATCTTCCGCAAGAGCAACTTCATCTTCGACAAGCTGCACAAGGTGGGCATCAAGACGCGCCGGCAGTGGCGCCGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CAA 90 bp CAGAACTGCGAGCGGCGCCACTGCCGGCGCGTCTTGATGCCCACCTaGTGCAGCTTGTCGAAGATGAAGTTGCTCTTGCGGAAGATGAAG +
Preference number: 2 (lower is better)
Translates to: QNCERRHCRRVLMPT*CSLSKMKLLLRKMK
Trigger: CTTCATCTTCCGCAAGAGCAACTTCATCTTCGACAAGCTGCACAAGGTGGGCATCAAGACGCGCCGGCAGTGGCGCCGCTCGCAGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CCA 90 bp ACGCTCACCTCTGCTCATGCCCGTTCACACACACACCATCCTGCTTTAAACCCACATGCGGACAGAGGTTaGGGATGCGCGCAGTGCGGG +
Preference number: 2 (lower is better)
Translates to: TLTSAHARSHTHHPALNPHADRG*GCAQCG
Trigger: CCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATG...TGGGTTTAAAGCAGGATGGTGTGTGTGTGAACGGGCATGAGCAGAGGTGAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR CCA 90 bp CATGCCCGTTCACACACACACCATCCTGCTTTAAACCCATCCTGTCTCCTGATGCCTCTTCCCTGGCTCTaGGCTGGGGGAGCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: HARSHTHHPALNPSCLLMPLPWL*AGGAGL
Trigger: CAGCCCAGCTCCCCCAGCCCAGAGCCAGGGAAGAGG...CATCAGGAGACAGGATGGGTTTAAAGCAGGATGGTGTGTGTGTGAACGGGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR CAA 90 bp ATGTTGATGTCGCAGAACTGCGAGCGGCGCCACTGCCGGCGCGTCTaGATGCCCACCTTGTGCAGCTTGTCGAAGATGAAGTTGCTCTTG +
Preference number: 2 (lower is better)
Translates to: MLMSQNCERRHCRRV*MPTLCSLSKMKLLL
Trigger: CAAGAGCAACTTCATCTTCGACAAGCTGCACAAGGTGGGCATCAAGACGCGCCGGCAGTGGCGCCGCTCGCAGTTCTGCGACATCAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR GCA 90 bp GGATGTAGGGGTGCACGTCCAGGGAGAAGTGGCGCGCGTGCTTCTTGTCAGGGGTTGATGCCCACCTTGTaGAGCTTGTCGAAGATGAAG +
Preference number: 2 (lower is better)
Translates to: GCRGARPGRSGARASCQGLMPTL*SLSKMK
Trigger: CTTCATCTTCGACAAGCTGCACAAGGTGGGCATCAA...CCCCTGACAAGAAGCACGCGCGCCACTTCTCCCTGGACGTGCACCCCTACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CCA 90 bp ACGCTCACCTCTGCTCATGCCCGTTCACACACACACCATCCTGCTTTAAACCCACACCTTCCTCTTCCCTaGCTCTGGGCTGGGGGAGCT +
Preference number: 2 (lower is better)
Translates to: TLTSAHARSHTHHPALNPHLPLP*LWAGGA
Trigger: AGCTCCCCCAGCCCAGAGCCAGGGAAGAGGAAGGTG...TGGGTTTAAAGCAGGATGGTGTGTGTGTGAACGGGCATGAGCAGAGGTGAGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR CAA 90 bp ATGAAGTCCAGCCGGTTGAGCGACTTGATGTGGTCGCGGTTCTCGTaGCAGAACATGGCCAGGATGTTGATGTCGCAGAACTGCGAGCGG +
Preference number: 2 (lower is better)
Translates to: MKSSRLSDLMWSRFS*QNMARMLMSQNCER
Trigger: CCGCTCGCAGTTCTGCGACATCAACATCCTGGCCATGTTCTGCAACGAGAACCGCGACCACATCAAGTCGCTCAACCGGCTGGACTTCAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CAA 90 bp ATGAGGTCGCTCTCGTTGGTGATGAAGTCCAGCCGGTTGAGCGACTaGATGTGGTCGCGGTTCTCGTTGCAGAACATGGCCAGGATGTTG +
Preference number: 2 (lower is better)
Translates to: MRSLSLVMKSSRLSD*MWSRFSLQNMARML
Trigger: CAACATCCTGGCCATGTTCTGCAACGAGAACCGCGACCACATCAAGTCGCTCAACCGGCTGGACTTCATCACCAACGAGAGCGACCTCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CAA 90 bp TTGTCGTACATGAGGTCGCTCTCGTTGGTGATGAAGTCCAGCCGGTaGAGCGACTTGATGTGGTCGCGGTTCTCGTTGCAGAACATGGCC +
Preference number: 2 (lower is better)
Translates to: LSYMRSLSLVMKSSR*SDLMWSRFSLQNMA
Trigger: GGCCATGTTCTGCAACGAGAACCGCGACCACATCAAGTCGCTCAACCGGCTGGACTTCATCACCAACGAGAGCGACCTCATGTACGACAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR GCA 90 bp TCGTACATGAGGTCGCTCTCGTTGGTGATGAAGTCCAGCCGGTTGAGCGACTTGTTCTCGAACAGGTTCTaGTCCGGGCTCTTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: SYMRSLSLVMKSSRLSDLFSNRF*SGLFSF
Trigger: GAAGGAGAAGAGCCCGGAGCAGAACCTGTTCGAGAA...CAAGTCGCTCAACCGGCTGGACTTCATCACCAACGAGAGCGACCTCATGTACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR GCA 90 bp ATGCTCGGTGCTACCTTGTTAATTCTGCATGACATGGTCTCCATGGCTGAGGTAGCACCACACCCTCTGTaGACACGCACACACGTGCAC +
Preference number: 2 (lower is better)
Translates to: MLGATLLILHDMVSMAEVAPHPL*TRTHVH
Trigger: GTGCACGTGTGTGCGTGTGCACAGAGGGTGTGGTGC...TACCTCAGCCATGGAGACCATGTCATGCAGAATTAACAAGGTAGCACCGAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR CCA 90 bp CACACACCATCCTGCTTTAAACCCATCCTGTCTCCTGATGATAAATATGCTTGTCTGGGCTGGGGGAGTTaGGCTGTCTCGCCACAGCCC +
Preference number: 2 (lower is better)
Translates to: HTPSCFKPILSPDDKYACLGWGS*AVSPQP
Trigger: GGGCTGTGGCGAGACAGCCCAACTCCCCCAGCCCAG...ACAAGCATATTTATCATCAGGAGACAGGATGGGTTTAAAGCAGGATGGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR CCA 90 bp GCGGCGCCACTGCCGGCGCGTCTTGATGCCCACCTTGTGCAGCTTGTCGAAGATGGGTGTAACAGTAAATaGGTTCCTTTATGTTTTGTC +
Preference number: 2 (lower is better)
Translates to: AAPLPARLDAHLVQLVEDGCNSK*VPLCFV
Trigger: GACAAAACATAAAGGAACCCATTTACTGTTACACCC...ATCTTCGACAAGCTGCACAAGGTGGGCATCAAGACGCGCCGGCAGTGGCGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CCA 90 bp AGCGACTTGATGTGGTCGCGGTTCTCGTTGCAGAACATGGCCAGGATGTTGATGCGGAAGATGAAGAGGTaGATGAGGTTGACGAGGATG +
Preference number: 2 (lower is better)
Translates to: SDLMWSRFSLQNMARMLMRKMKR*MRLTRM
Trigger: CATCCTCGTCAACCTCATCCACCTCTTCATCTTCCG...CATCAACATCCTGGCCATGTTCTGCAACGAGAACCGCGACCACATCAAGTCGCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR GCA 90 bp TCCTGTCTCCTGATGATAAATATGCTTGTTCGGTACAGCAGTCTTAGTAAAATACGAAGGCCCCAGGCATaGGGACAGAGGTTGGGGATG +
Preference number: 2 (lower is better)
Translates to: SCLLMINMLVRYSSLSKIRRPQA*GQRLGM
Trigger: CATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCG...TATTTTACTAAGACTGCTGTACCGAACAAGCATATTTATCATCAGGAGACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR CCA 72 bp TGCACCCCCGAGTCGCGCACCGTGGGGGTGGCGTCGTaGTTGGACTGCGCCAGCGCCGCCAGCAGCTGCCGG +
Preference number: 3 (lower is better)
Translates to: CTPESRTVGVAS*LDCASAASSCR
Trigger: CCGGCAGCTGCTGGCGGCGCTGGCGCAGTCCAACCACGACGCCACCCCCACGGTGCGCGACTCGGGGGTGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CCA 72 bp CCACGGTCTGCACCCCCGAGTCGCGCACCGTGGGGGTaGCGTCGTGGTTGGACTGCGCCAGCGCCGCCAGCA +
Preference number: 3 (lower is better)
Translates to: PRSAPPSRAPWG*RRGWTAPAPPA
Trigger: TGCTGGCGGCGCTGGCGCAGTCCAACCACGACGCCACCCCCACGGTGCGCGACTCGGGGGTGCAGACCGTGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CCA 72 bp CGGAGCGGTCCAGCAGCGGCGCGATCAGCGTGTCCGTaGCCGTCTTCCTGCGCGCGGGCTTCGGCTTCTCCG +
Preference number: 3 (lower is better)
Translates to: RSGPAAARSACP*PSSCARASASP
Trigger: CGGAGAAGCCGAAGCCCGCGCGCAGGAAGACGGCCACGGACACGCTGATCGCGCCGCTGCTGGACCGCTCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR TCA 72 bp TGGTGGGGATCCACTTCATCTTCTTGCGCGGCCGCTTaGCCACGGGCGGCTCGGCGGCGCCGTCGGGCTCGG +
Preference number: 3 (lower is better)
Translates to: WWGSTSSSCAAA*PRAARRRRRAR
Trigger: CCGAGCCCGACGGCGCCGCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGAAGATGAAGTGGATCCCCACCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR GCA 72 bp TCGCGCTCCGTGATGCCCGGGCCCTTGGACTGGATCTaGTTCTCGATCTTGGGCGCGCGGCCCTCGGCCGCC +
Preference number: 3 (lower is better)
Translates to: SRSVMPGPLDWI*FSILGARPSAA
Trigger: GGCGGCCGAGGGCCGCGCGCCCAAGATCGAGAAGCAGATCCAGTCCAAGGGCCCGGGCATCACGGAGCGCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CAA 90 bp CCTGCCCGGGCTGGCTCTGTGGGGTACGGGATTTCCTTCTCGGGGAGCGGAGCATTCTTGCGCGGCCGCTaGACCACGGGCGGCTCGGCG +
Preference number: 3 (lower is better)
Translates to: PARAGSVGYGISFSGSGAFLRGR*TTGGSA
Trigger: CGCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGAA...TGCTCCGCTCCCCGAGAAGGAAATCCCGTACCCCACAGAGCCAGCCCGGGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR GCA 72 bp CCCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTaGGGGCGAAGCACAGGCCACGTCCACGCAGGGCTG +
Preference number: 3 (lower is better)
Translates to: PRHADRGWGCAQ*GRSTGHVHAGL
Trigger: CAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
3UTR GCA 72 bp GGCGAAGGCCCCAGGCATGCGGACAGAGGTTGGGGATaGGCGCAGTGCGGGCGAAGCACAGGCCACGTCCAC +
Preference number: 3 (lower is better)
Translates to: GEGPRHADRGWG*AQCGRSTGHVH
Trigger: GTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
3UTR CCA 72 bp GCCCCCACCCACGGCTGGGCACCTGATGCAGGAGCATaGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTC +
Preference number: 3 (lower is better)
Translates to: APTHGWAPDAGA*EAGFSLPGHRL
Trigger: GAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGTGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
3UTR CCA 72 bp GCAGGGCGGCGGGCACCGCCTCGGCCTTGGCCTTCTTaGTGCCGAGGATGTAGGGGTGCACGTCCAGGGAGA +
Preference number: 3 (lower is better)
Translates to: AGRRAPPRPWPS*CRGCRGARPGR
Trigger: TCTCCCTGGACGTGCACCCCTACATCCTCGGCACCAAGAAGGCCAAGGCCGAGGCGGTGCCCGCCGCCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CAA 90 bp CCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCTGGGGGACGTGGTTATaGCGTTGGGCCCCTTCACTC +
Preference number: 3 (lower is better)
Translates to: PGDAVRAGSPVEHVGAKAWGTWL*RWAPSL
Trigger: GAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCA...GGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR CAA 90 bp CTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCACGCATGCGGACAGAGGTaGGGGATGCGCGCAGTGCGG +
Preference number: 3 (lower is better)
Translates to: LIHGPRAGVHSRTRPPAHACGQR*GMRAVR
Trigger: CCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGC...GTGAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR CAA 90 bp TGCACGTTGACCTTTGACCCGAGGGTGGACCTCGGTCCCTCCCACCCGAGGGCAGCTGGGCTGGGGGAGTaGGGCTGTCTCGCCACAGCC +
Preference number: 3 (lower is better)
Translates to: CTLTFDPRVDLGPSHPRAAGLGE*GCLATA
Trigger: GGCTGTGGCGAGACAGCCCAACTCCCCCAGCCCAGC...TGCCCTCGGGTGGGAGGGACCGAGGTCCACCCTCGGGTCAAAGGTCAACGTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR CAA 90 bp GGTGGGCGGAGCGGTCCAGCAGCGGCGCGATCAGCGTGTCCGTGGCCGTCTTCCAGCTGCCGGACCACGTaGTCGTACATGAGGTCGCTC +
Preference number: 3 (lower is better)
Translates to: GGRSGPAAARSACPWPSSSCRTT*SYMRSL
Trigger: GAGCGACCTCATGTACGACAACGTGGTCCGGCAGCT...GGAAGACGGCCACGGACACGCTGATCGCGCCGCTGCTGGACCGCTCCGCCCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR TCA 72 bp AGGCCAGGAACTCCCAGCCCAGCGCGGGCACGTACATaGTGGCGGCGAAGGCCAGCAGCGCGTAGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: RPGTPSPARART*WRRRPAARRAG
Trigger: TCCTGCCCTACGCGCTGCTGGCCTTCGCCGCCATCATGTACGTGCCCGCGCTGGGCTGGGAGTTCCTGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR GCA 72 bp GCAGCGGCGCGATCAGCGTGTCCGTGGCCGTCTTCCTaGGCGCGGGCTTCGGCTTCTCCGCCTTGCTGTTCT +
Preference number: 3 (lower is better)
Translates to: AAARSACPWPSS*ARASASPPCCS
Trigger: AGAACAGCAAGGCGGAGAAGCCGAAGCCCGCGCGCAGGAAGACGGCCACGGACACGCTGATCGCGCCGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR GCA 72 bp GGGCGGCGGGCACCGCCTCGGCCTTGGCCTTCTTGGTaGCGAGGATGTAGGGGTGCACGTCCAGGGAGAAGT +
Preference number: 3 (lower is better)
Translates to: GRRAPPRPWPSW*RGCRGARPGRS
Trigger: ACTTCTCCCTGGACGTGCACCCCTACATCCTCGGCACCAAGAAGGCCAAGGCCGAGGCGGTGCCCGCCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CCA 72 bp TGCCCGGGCCCTTGGACTGGATCTGCTTCTCGATCTTaGGCGCGCGGCCCTCGGCCGCCCGGTGGTAACAGT +
Preference number: 3 (lower is better)
Translates to: CPGPWTGSASRS*ARGPRPPGGNS
Trigger: ACTGTTACCACCGGGCGGCCGAGGGCCGCGCGCCCAAGATCGAGAAGCAGATCCAGTCCAAGGGCCCGGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CCA 72 bp CGCTTCTCGCGCTCCGTGATGCCCGGGCCCTTGGACTaGATCTGCTTCTCGATCTTGGGCGCGCGGCCCTCG +
Preference number: 3 (lower is better)
Translates to: RFSRSVMPGPLD*ICFSILGARPS
Trigger: CGAGGGCCGCGCGCCCAAGATCGAGAAGCAGATCCAGTCCAAGGGCCCGGGCATCACGGAGCGCGAGAAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CAA 90 bp TGTAGGGGTGCACGTCCAGGGAGAAGTGGCGCGCGTGCTTCTTGTCAGGGGCGGGCATGCGGACAGAGGTaGGGGATGCGCGCAGTGCGG +
Preference number: 3 (lower is better)
Translates to: CRGARPGRSGARASCQGRACGQR*GMRAVR
Trigger: CCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGC...CCGCCCCTGACAAGAAGCACGCGCGCCACTTCTCCCTGGACGTGCACCCCTACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR TCA 72 bp GCAGCAGCGGGTGTGTGGCGTTTCGGCTCAGGATGGTaGGGGGCTCCGCCTTGCCCAGGCTGGCTGGTGTCA +
Preference number: 3 (lower is better)
Translates to: AAAGVWRFGSGW*GAPPCPGWLVS
Trigger: TGACACCAGCCAGCCTGGGCAAGGCGGAGCCCCTCACCATCCTGAGCCGAAACGCCACACACCCGCTGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR GCA 72 bp TCCATGGCTGAGGTATTTGGGGTGGGACCAGCCGGGTaGCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCT +
Preference number: 3 (lower is better)
Translates to: SMAEVFGVGPAG*RPGLPQEAMWP
Trigger: AGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTGGTCCCACCCCAAATACCTCAGCCATGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR GCA 72 bp AGCACGATGTCCACGCCCGCGATGATGCGCTGCAGTTaGACGGACGGGAGCTTGCAGCTCACGCGCACCGCG +
Preference number: 3 (lower is better)
Translates to: STMSTPAMMRCS*TDGSLQLTRTA
Trigger: CGCGGTGCGCGTGAGCTGCAAGCTCCCGTCCGTGCAACTGCAGCGCATCATCGCGGGCGTGGACATCGTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR GCA 72 bp CACAGCAGCACGATGTCCACGCCCGCGATGATGCGCTaGAGTTGCACGGACGGGAGCTTGCAGCTCACGCGC +
Preference number: 3 (lower is better)
Translates to: HSSTMSTPAMMR*SCTDGSLQLTR
Trigger: GCGCGTGAGCTGCAAGCTCCCGTCCGTGCAACTGCAGCGCATCATCGCGGGCGTGGACATCGTGCTGCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CCA 72 bp TTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCTaGCGTGCACTCACGCACTCGCCCGCCTGCTCACAC +
Preference number: 3 (lower is better)
Translates to: LGPFTPHTWATR*RALTHSPACSH
Trigger: GTGTGAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR CCA 72 bp TGCATGACATGGTCTCCATGGCTGAGGTATTTGGGGTaGGACCAGCCGGGTGCCGGCCGGGGCTCCCACAGG +
Preference number: 3 (lower is better)
Translates to: CMTWSPWLRYLG*DQPGAGRGSHR
Trigger: CCTGTGGGAGCCCCGGCCGGCACCCGGCTGGTCCCACCCCAAATACCTCAGCCATGGAGACCATGTCATGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR GCA 72 bp CCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTaGACTCACGCACTCGCCCGCCTGCTCACACTCACA +
Preference number: 3 (lower is better)
Translates to: PLHSSYMGHALA*THALARLLTLT
Trigger: TGTGAGTGTGAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR CAA 90 bp TGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCATGCGGACAGAGGTaGGGGATGCGCGCAGTGCGG +
Preference number: 3 (lower is better)
Translates to: WGTWLLRWAPSLLIHGPRACGQR*GMRAVR
Trigger: CCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGC...GCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR CAA 90 bp GGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCAGGAGAAAGTGCACGTaGACCTTTGACCCGAGGGTG +
Preference number: 3 (lower is better)
Translates to: GAWEAGFSLPGHRLHWATRRKCT*TFDPRV
Trigger: CACCCTCGGGTCAAAGGTCAACGTGCACTTTCTCCT...GGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR CAA 90 bp TGCGGCCGCGGCGCTCCAGGTACTTCTCGAACAGGTTCTGCTCCGGGCTCTTCTGTGATGCCCGGGCCCTaGGACTGGATCTGCTTCTCG +
Preference number: 3 (lower is better)
Translates to: CGRGAPGTSRTGSAPGSSVMPGP*DWICFS
Trigger: CGAGAAGCAGATCCAGTCCAAGGGCCCGGGCATCAC...AGAAGAGCCCGGAGCAGAACCTGTTCGAGAAGTACCTGGAGCGCCGCGGCCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CAA 90 bp CCTGCCCGGGCTGGCTCTGTGGGGTACGGGATTTCCTTCTCGGGGAGCGGAGCATGGTCGCGGTTCTCGTaGCAGAACATGGCCAGGATG +
Preference number: 3 (lower is better)
Translates to: PARAGSVGYGISFSGSGAWSRFS*QNMARM
Trigger: CATCCTGGCCATGTTCTGCAACGAGAACCGCGACCA...TGCTCCGCTCCCCGAGAAGGAAATCCCGTACCCCACAGAGCCAGCCCGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CAA 90 bp AACTCCACAGTACTCACGACCGTTCTCGGCTCGTCGAAGGTGGCGATGAGGATAGGGGTGGCGTCGTGGTaGGACTGCGCCAGCGCCGCC +
Preference number: 3 (lower is better)
Translates to: NSTVLTTVLGSSKVAMRIGVASW*DCASAA
Trigger: GGCGGCGCTGGCGCAGTCCAACCACGACGCCACCCC...TATCCTCATCGCCACCTTCGACGAGCCGAGAACGGTCGTGAGTACTGTGGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR TCA 72 bp GGTCGCGGTTCTCGTTGCAGAACATGGCCAGGATGTTaGTGTCGCAGAACTGCGAGCGGCGCCACTGCCGGC +
Preference number: 3 (lower is better)
Translates to: GRGSRCRTWPGC*CRRTASGATAG
Trigger: GCCGGCAGTGGCGCCGCTCGCAGTTCTGCGACATCAACATCCTGGCCATGTTCTGCAACGAGAACCGCGACC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR GCA 72 bp CGGCCGCGGCGCTCCAGGTACTTCTCGAACAGGTTCTaGTCCGGGCTCTTCTCCTTCTCCGCGTTCTCGATG +
Preference number: 3 (lower is better)
Translates to: RPRRSRYFSNRF*SGLFSFSAFSM
Trigger: CATCGAGAACGCGGAGAAGGAGAAGAGCCCGGAGCAGAACCTGTTCGAGAAGTACCTGGAGCGCCGCGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CCA 72 bp GTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATaGGCCACGCGCTGGCGTGCACTCACGCACTCGCCC +
Preference number: 3 (lower is better)
Translates to: VVIALGPFTPHT*ATRWRALTHSP
Trigger: GGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR CAA 90 bp CTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCACAGGAGAAAGTGCACGTaGACCTTTGACCCGAGGGTG +
Preference number: 3 (lower is better)
Translates to: LIHGPRAGVHSRTRPPAHRRKCT*TFDPRV
Trigger: CACCCTCGGGTCAAAGGTCAACGTGCACTTTCTCCT...GTGAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR-3UTR CAA 90 bp GGATGTAGGGGTGCACGTCCAGGGAGAAGTGGCGCGCGTGCTTCTTGTCAGGGGATGAGGTCGCTCTCGTaGGTGATGAAGTCCAGCCGG +
Preference number: 3 (lower is better)
Translates to: GCRGARPGRSGARASCQGMRSLS*VMKSSR
Trigger: CCGGCTGGACTTCATCACCAACGAGAGCGACCTCAT...CCCCTGACAAGAAGCACGCGCGCCACTTCTCCCTGGACGTGCACCCCTACATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CAA 90 bp AACTCCACAGTACTCACGACCGTTCTCGGCTCGTCGAAGGTGGCGATGAGGATAGTGAGGGGCTCCGCCTaGCCCAGGCTGGCTGGTGTC +
Preference number: 3 (lower is better)
Translates to: NSTVLTTVLGSSKVAMRIVRGSA*PRLAGV
Trigger: GACACCAGCCAGCCTGGGCAAGGCGGAGCCCCTCAC...TATCCTCATCGCCACCTTCGACGAGCCGAGAACGGTCGTGAGTACTGTGGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR TCA 72 bp CTGTCAGGCGACAAGGAGAAAGTGCACGTTGACCTTTaGCCCGAGGGTGGACCTCGGTCCCTCCCACCCGAG +
Preference number: 3 (lower is better)
Translates to: LSGDKEKVHVDL*PEGGPRSLPPE
Trigger: CTCGGGTGGGAGGGACCGAGGTCCACCCTCGGGTCAAAGGTCAACGTGCACTTTCTCCTTGTCGCCTGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR GCA 72 bp AGGATGTTGATGTCGCAGAACTGCGAGCGGCGCCACTaGCGGCGCGTCTTGATGCCCACCTTGTGCAGCTTG +
Preference number: 3 (lower is better)
Translates to: RMLMSQNCERRH*RRVLMPTLCSL
Trigger: CAAGCTGCACAAGGTGGGCATCAAGACGCGCCGGCAGTGGCGCCGCTCGCAGTTCTGCGACATCAACATCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR GCA 72 bp TTGCAGAACATGGCCAGGATGTTGATGTCGCAGAACTaGGAGCGGCGCCACTGCCGGCGCGTCTTGATGCCC +
Preference number: 3 (lower is better)
Translates to: LQNMARMLMSQN*ERRHCRRVLMP
Trigger: GGGCATCAAGACGCGCCGGCAGTGGCGCCGCTCGCAGTTCTGCGACATCAACATCCTGGCCATGTTCTGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CAA 90 bp TTGTCGTACATGAGGTCGCTCTCGTTGGTGATGAAGTCCAGCCGGTTGAGCGACATCTGCTTCTCGATCTaGGGCGCGCGGCCCTCGGCC +
Preference number: 3 (lower is better)
Translates to: LSYMRSLSLVMKSSRLSDICFSI*GARPSA
Trigger: GGCCGAGGGCCGCGCGCCCAAGATCGAGAAGCAGAT...GTCGCTCAACCGGCTGGACTTCATCACCAACGAGAGCGACCTCATGTACGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CAA 90 bp AGCTGCCGGACCACGTTGTCGTACATGAGGTCGCTCTCGTTGGTGATGAAGTCCCGCGCCAGGTACAGCTaGGCCAGGAAGTTGCTGCGG +
Preference number: 3 (lower is better)
Translates to: SCRTTLSYMRSLSLVMKSRARYS*ARKLLR
Trigger: CCGCAGCAACTTCCTGGCCAAGCTGTACCTGGCGCG...GGACTTCATCACCAACGAGAGCGACCTCATGTACGACAACGTGGTCCGGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CAA 90 bp AAGCCCTGCCCGGGCTGGCTCTGTGGGGTACGGGATTTCCTTCTCGGGGAGCGGAAGAGGTGGATGAGGTaGACGAGGATGATGAGGTTC +
Preference number: 3 (lower is better)
Translates to: KPCPGWLCGVRDFLLGERKRWMR*TRMMRF
Trigger: GAACCTCATCATCCTCGTCAACCTCATCCACCTCTT...CCGCTCCCCGAGAAGGAAATCCCGTACCCCACAGAGCCAGCCCGGGCAGGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR GCA 72 bp CGGCGCCACTGCCGGCGCGTCTTGATGCCCACCTTGTaGAGCTTGTCGAAGATGAAGTTGCTCTTGCGGAAG +
Preference number: 3 (lower is better)
Translates to: RRHCRRVLMPTL*SLSKMKLLLRK
Trigger: CTTCCGCAAGAGCAACTTCATCTTCGACAAGCTGCACAAGGTGGGCATCAAGACGCGCCGGCAGTGGCGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CAA 90 bp TTCCTGCGCGCGGGCTTCGGCTTCTCCGCCTTGCTGTTCTCCACGCGCATGATGGTCTTGATGCCCACCTaGTGCAGCTTGTCGAAGATG +
Preference number: 3 (lower is better)
Translates to: FLRAGFGFSALLFSTRMMVLMPT*CSLSKM
Trigger: CATCTTCGACAAGCTGCACAAGGTGGGCATCAAGAC...CATCATGCGCGTGGAGAACAGCAAGGCGGAGAAGCCGAAGCCCGCGCGCAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR GCA 72 bp CTCGTCGAAGGTGGCGATGAGGATAGCGTGTTGATGTaGAGCAGCGGGTGTGTGGCGTTTCGGCTCAGGATG +
Preference number: 3 (lower is better)
Translates to: LVEGGDEDSVLM*SSGCVAFRLRM
Trigger: CATCCTGAGCCGAAACGCCACACACCCGCTGCTGCACATCAACACGCTATCCTCATCGCCACCTTCGACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR TCA 72 bp AAAATGTCTGTCAGGCGACAAGGAGAAAGTGCACGTTaGCCTTTGACCCGAGGGTGGACCTCGGTCCCTCCC +
Preference number: 3 (lower is better)
Translates to: KMSVRRQGESAR*PLTRGWTSVPP
Trigger: GGGAGGGACCGAGGTCCACCCTCGGGTCAAAGGTCAACGTGCACTTTCTCCTTGTCGCCTGACAGACATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR GCA 72 bp CTCGTACATACACACCCGCTCGCTCACGCTCACCTCTaGTCATGCCCGTTCACACACACACCATCCTGCTTT +
Preference number: 3 (lower is better)
Translates to: LVHTHPLAHAHL*SCPFTHTPSCF
Trigger: AAAGCAGGATGGTGTGTGTGTGAACGGGCATGAGCAGAGGTGAGCGTGAGCGAGCGGGTGTGTATGTACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR CCA 72 bp TTGGTGATGAAGTCCAGCCGGTTGAGCGACTTGATGTaGTCGCGGTTCTCGTTGCAGAACATGGCCAGGATG +
Preference number: 3 (lower is better)
Translates to: LVMKSSRLSDLM*SRFSLQNMARM
Trigger: CATCCTGGCCATGTTCTGCAACGAGAACCGCGACCACATCAAGTCGCTCAACCGGCTGGACTTCATCACCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR-3UTR CAA 90 bp TCCTGTCTCCTGATGATAAATATGCTTGTTCGGTACAGCAGTCTTAGTAAAATAGCTGGGCTGGGGGAGTaGGGCTGTCTCGCCACAGCC +
Preference number: 3 (lower is better)
Translates to: SCLLMINMLVRYSSLSKIAGLGE*GCLATA
Trigger: GGCTGTGGCGAGACAGCCCAACTCCCCCAGCCCAGC...TATTTTACTAAGACTGCTGTACCGAACAAGCATATTTATCATCAGGAGACAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR GCA 72 bp CACCTCTGCTCATGCCCGTTCACACACACACCATCCTaGTTTAAACCCATCCTGTCTCCTGATGATAAATAT +
Preference number: 3 (lower is better)
Translates to: HLCSCPFTHTPS*FKPILSPDDKY
Trigger: ATATTTATCATCAGGAGACAGGATGGGTTTAAAGCAGGATGGTGTGTGTGTGAACGGGCATGAGCAGAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp CAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCAGCCGCGGCGCACGGACGGGAGCTTaGAGCTCACGCGCACCGCGG +
Preference number: 4 (lower is better)
Translates to: QPGAGRGSHRKPCGLSRGARTGA*SSRAPR
Trigger: CCGCGGTGCGCGTGAGCTGCAAGCTCCCGTCCGTGC...GCCGCGGCTGAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp CTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCCCCCCGAGGGAAGCCCTaGCCGGGCTGGCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LAMPSGRVPLSSTWGRRPPRGKP*PGWLCG
Trigger: CCCACAGAGCCAGCCCGGGCAGGGCTTCCCTCGGGG...GGGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAG
76% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR TCA 90 bp CCACGCCGGGCAGCGCGTCCCGCAGCTCCGTCCAGCAGTAGCCGCGGGCGTACAGGAGCGGAGCATCTTTaGTGGGCGCCGGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PRRAARPAAPSSSSRGRTGAEHL*WAPGPG
Trigger: GCCTGGCCCCGGCGCCCATCAAAGATGCTCCGCTCC...TGTACGCCCGCGGCTACTGCTGGACGGAGCTGCGGGACGCGCTGCCCGGCGTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR TCA 90 bp AGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAAGGGGCGGCGGGAGGTaGGCGGACGTGGAACGGGCC +
Preference number: 4 (lower is better)
Translates to: SAWRCRPGGFPCRARGGERGGGR*ADVERA
Trigger: GGCCCGTTCCACGTCCGCTCACCTCCCGCCGCCCCT...TTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp CTTCTTGCGCGGCCGCTTGACCACGGGCGGCTCGGCGGCGCCGTCGGGCTCGGCCGGGCGTACAGCGCCTaGTCGCGCGTGAAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: LLARPLDHGRLGGAVGLGRAYSA*SRVKLC
Trigger: GCACAACTTCACGCGCGACCAGGCGCTGTACGCCCG...GCCGAGCCCGACGGCGCCGCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGAAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CCA 90 bp CCACGCCGGGCAGCGCGTCCCGCAGCTCCGTCCAGCAGTAGCCGCGGGCGTACACCGAGTCGCGCACCGTaGGGGTGGCGTCGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: PRRAARPAAPSSSSRGRTPSRAP*GWRRGW
Trigger: CCAACCACGACGCCACCCCCACGGTGCGCGACTCGG...TGTACGCCCGCGGCTACTGCTGGACGGAGCTGCGGGACGCGCTGCCCGGCGTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CCA 90 bp CACCCCAGCCAGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGCGGGCTCGGCGGGGTTaGCGCTGGGGTCCACGGTCT +
Preference number: 4 (lower is better)
Translates to: HPSQCLAMPSGRVPLSSTRARRG*RWGPRS
Trigger: AGACCGTGGACCCCAGCGCCAACCCCGCCGAGCCCG...CGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
3UTR CAA 72 bp CCCGCGATGATGCGCTGCAGTTGCACGGACGGGAGCTaGCAGCTCACGCGCACCGCGGGCCCCGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: PAMMRCSCTDGS*QLTRTAGPAPA
Trigger: GGCAGGTGCGGGGCCCGCGGTGCGCGTGAGCTGCAAGCTCCCGTCCGTGCAACTGCAGCGCATCATCGCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR TCA 90 bp CTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCCGCTTCTCGCGCTCCGTaGTGCCCGGGCCCTTGGACT +
Preference number: 4 (lower is better)
Translates to: LAMPSGRVPLSSTWGRRPASRAP*CPGPWT
Trigger: AGTCCAAGGGCCCGGGCATCACGGAGCGCGAGAAGC...GGGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR TCA 90 bp CCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCTCTTGCGCGGCCGCTTaGCCACGGGCGGCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: PGMRTEVGDARSAGEAQASCAAA*PRAARR
Trigger: CCGCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGA...GGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR TCA 90 bp CACCCCAGCCAGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGGGAGCGGAGCATCTTTaGTGGGCGCCGGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: HPSQCLAMPSGRVPLSSTGAEHL*WAPGPG
Trigger: GCCTGGCCCCGGCGCCCATCAAAGATGCTCCGCTCC...CGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp GGGCGAAGGCCCCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGGCACGGACGGGAGCTTaGAGCTCACGCGCACCGCGG +
Preference number: 4 (lower is better)
Translates to: GRRPQACGQRLGMRAVRAARTGA*SSRAPR
Trigger: CCGCGGTGCGCGTGAGCTGCAAGCTCCCGTCCGTGC...CGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp CCACCCCAGCCAGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACCTGGGGTCCACGGTCTaGACCCCCGAGTCGCGCACC +
Preference number: 4 (lower is better)
Translates to: PPQPVPGDAVRAGSPVEHLGSTV*TPESRT
Trigger: GGTGCGCGACTCGGGGGTGCAGACCGTGGACCCCAG...GTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp GGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGGTGTCCCCACCCCAGCCAGTaGCTGGCGATGCCGTCCGGG +
Preference number: 4 (lower is better)
Translates to: GDARSAGEAQATSTQGWCPHPSQ*LAMPSG
Trigger: CCCGGACGGCATCGCCAGGCACTGGCTGGGGTGGGG...ACACCAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp CACCCCAGCCAGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGGGGTGGCGTCGTGGTTaGACTGCGCCAGCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: HPSQCLAMPSGRVPLSSTGWRRG*TAPAPP
Trigger: TGGCGGCGCTGGCGCAGTCCAACCACGACGCCACCC...CGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp CACCCCAGCCAGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGGTGGGGGTGGCGTCGTaGTTGGACTGCGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: HPSQCLAMPSGRVPLSSTVGVAS*LDCASA
Trigger: GGCGCTGGCGCAGTCCAACCACGACGCCACCCCCAC...CGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GGTGGGCGGAGCGGTCCAGCAGCGGCGCGATCAGCGTGTCCGTGGCCGTCTTCCCGCGCACCGTGGGGGTaGCGTCGTGGTTGGACTGCG +
Preference number: 4 (lower is better)
Translates to: GGRSGPAAARSACPWPSSRAPWG*RRGWTA
Trigger: CGCAGTCCAACCACGACGCCACCCCCACGGTGCGCG...GGAAGACGGCCACGGACACGCTGATCGCGCCGCTGCTGGACCGCTCCGCCCACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CCA 90 bp CACCCCAGCCAGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGCCGAGTCGCGCACCGTaGGGGTGGCGTCGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: HPSQCLAMPSGRVPLSSTPSRAP*GWRRGW
Trigger: CCAACCACGACGCCACCCCCACGGTGCGCGACTCGG...CGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp CTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCCACGTCCACGCAGGGCTaGTGTCCACCGGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LAMPSGRVPLSSTWGRRPTSTQG*CPPGGW
Trigger: CCAGCCTCCCGGTGGACACCAGCCCTGCGTGGACGT...GGGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GATGCGCTGCAGTTGCACGGACGGGAGCTTGCAGCTCACGCGCACCGCGGGCCCACCCCAGCCAGTGCCTaGCGATGCCGTCCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: DALQLHGRELAAHAHRGPTPASA*RCRPGG
Trigger: CCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGT...GGGCCCGCGGTGCGCGTGAGCTGCAAGCTCCCGTCCGTGCAACTGCAGCGCATC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CCA 90 bp GGACCAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCAGCCGCTGGGGGAGCTGGGCTaGGGGAGTTGGGCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: GPAGCRPGLPQEAMWPQPLGELG*GSWAVS
Trigger: CGAGACAGCCCAACTCCCCCAGCCCAGCTCCCCCAG...CGGCTGAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTGGTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR TCA 90 bp GGGCGAAGGCCCCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGGCACGGTGCCGATGGTaGCCACCCGGTCGAACGGCA +
Preference number: 4 (lower is better)
Translates to: GRRPQACGQRLGMRAVRAARCRW*PPGRTA
Trigger: TGCCGTTCGACCGGGTGGTCACCATCGGCACCGTGC...CGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR TCA 90 bp TCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCTCTTGCGCGGCCGCTTaGCCACGGGCGGCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: SSYMGHALACTHALARLLSCAAA*PRAARR
Trigger: CCGCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGA...GAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR TCA 90 bp GCAGCGGCGCGATCAGCGTGTCCGTGGCCGTCTTCCTGCGCGCGGGCTTCGGCTTGGCCAGCGGCTCCTTaGAGGGCTGCGGAAGCGGGT +
Preference number: 4 (lower is better)
Translates to: AAARSACPWPSSCARASAWPAAP*RAAEAG
Trigger: ACCCGCTTCCGCAGCCCTTCAAGGAGCCGCTGGCCA...AGCCGAAGCCCGCGCGCAGGAAGACGGCCACGGACACGCTGATCGCGCCGCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR TCA 90 bp GGACCAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCAGCCGTTCGGCTCAGGATGGTaGGGGGCTCCGCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GPAGCRPGLPQEAMWPQPFGSGW*GAPPCP
Trigger: TGGGCAAGGCGGAGCCCCTCACCATCCTGAGCCGAA...CGGCTGAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTGGTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp CAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCAGCCGCGGCTTGATGTCGCAGAACTaGGAGCGGCGCCACTGCCGG +
Preference number: 4 (lower is better)
Translates to: QPGAGRGSHRKPCGLSRGLMSQN*ERRHCR
Trigger: CCGGCAGTGGCGCCGCTCGCAGTTCTGCGACATCAA...GCCGCGGCTGAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp AGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAACTGGGGTCCACGGTCTaGACCCCCGAGTCGCGCACC +
Preference number: 4 (lower is better)
Translates to: SAWRCRPGGFPCRARGGELGSTV*TPESRT
Trigger: GGTGCGCGACTCGGGGGTGCAGACCGTGGACCCCAG...TTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp GGACCAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCAGCCGGAGAAGTGGCGCGCGTaGTTCTTGTCAGGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GPAGCRPGLPQEAMWPQPEKWRA*FLSGAG
Trigger: GCCCGCCCCTGACAAGAAGCACGCGCGCCACTTCTC...CGGCTGAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTGGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp GGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCCCCCACCCCAGCCAGTaGCTGGCGATGCCGTCCGGG +
Preference number: 4 (lower is better)
Translates to: GQRLGMRAVRAKHRPRPRPHPSQ*LAMPSG
Trigger: CCCGGACGGCATCGCCAGGCACTGGCTGGGGTGGGG...GCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GGACCAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCAGCCGCGGGCGTACAGCGCCTaGTCGCGCGTGAAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: GPAGCRPGLPQEAMWPQPRAYSA*SRVKLC
Trigger: GCACAACTTCACGCGCGACCAGGCGCTGTACGCCCG...CGGCTGAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTGGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCACCCCAGCCAGTGCGGCGGGGTTGGCGCTaGGGTCCACGGTCTGCACCC +
Preference number: 4 (lower is better)
Translates to: QPSWPPAPLGHLSPPQPVRRGWR*GPRSAP
Trigger: GGGTGCAGACCGTGGACCCCAGCGCCAACCCCGCCG...CACTGGCTGGGGTGGGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCCGGGCTCGGCGGGGTTaGCGCTGGGGTCCACGGTCT +
Preference number: 4 (lower is better)
Translates to: GAWEAGFSLPGHRLHWATRARRG*RWGPRS
Trigger: AGACCGTGGACCCCAGCGCCAACCCCGCCGAGCCCG...GGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp CTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCCAAGCCCTGCCCGGGCTaGCTCTGTGGGGTACGGGAT +
Preference number: 4 (lower is better)
Translates to: LAMPSGRVPLSSTWGRRPKPCPG*LCGVRD
Trigger: ATCCCGTACCCCACAGAGCCAGCCCGGGCAGGGCTT...GGGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp CACCCCAGCCAGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGCCGCCTTGCCCAGGCTaGCTGGTGTCAGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: HPSQCLAMPSGRVPLSSTPPCPG*LVSEGP
Trigger: TGGCCCCTCTGACACCAGCCAGCCTGGGCAAGGCGG...CGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GGGTGGGACCAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCCATGCGGACAGAGGTTaGGGATGCGCGCAGTGCGGG +
Preference number: 4 (lower is better)
Translates to: GWDQPGAGRGSHRKPCGLHADRG*GCAQCG
Trigger: CCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATG...GAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTGGTCCCACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GGGCGAAGGCCCCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGGCCCCCACCCACGGCTaGGCACCTGATGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GRRPQACGQRLGMRAVRAAPTHG*APDAGA
Trigger: TGCTCCTGCATCAGGTGCCCAGCCGTGGGTGGGGGC...CGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp CCACCCCAGCCAGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACCTGGGGGAGCTGGGCTaGGGGAGTTGGGCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: PPQPVPGDAVRAGSPVEHLGELG*GSWAVS
Trigger: CGAGACAGCCCAACTCCCCCAGCCCAGCTCCCCCAG...GTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GGGTGGGACCAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCCCCCACTGGTGGGACTaGCCCCACCTTCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GWDQPGAGRGSHRKPCGLPHWWD*PHLPLP
Trigger: GGGAAGAGGAAGGTGGGGCCAGTCCCACCAGTGGGG...GAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTGGTCCCACCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CACCCCAGCCAGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGGTGACCCCATGGGCGTaGCCACCCCACTGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: HPSQCLAMPSGRVPLSSTVTPWA*PPHWWD
Trigger: GTCCCACCAGTGGGGTGGCCACGCCCATGGGGTCAC...CGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR CAA 72 bp CTGGTGGGGATCCACTTCATCTTCTTGCGCGGCCGCTaGACCACGGGCGGCTCGGCGGCGCCGTCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LVGIHFIFLRGR*TTGGSAAPSGS
Trigger: CGAGCCCGACGGCGCCGCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGAAGATGAAGTGGATCCCCACCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR TCA 90 bp AGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGCGCGGGCACGTACATaGTGGCGGCGAAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SAWRCRPGGFPCRARGGEARART*WRRRPA
Trigger: TGCTGGCCTTCGCCGCCATCATGTACGTGCCCGCGC...TTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR TCA 90 bp GGGCGAAGGCCCCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGTGTCCACGCCCGCGATaGTGCGCTGCAGTTGCACGG +
Preference number: 4 (lower is better)
Translates to: GRRPQACGQRLGMRAVRACPRPR*CAAVAR
Trigger: CCGTGCAACTGCAGCGCATCATCGCGGGCGTGGACA...CGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR TCA 90 bp ATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCTCTTGCGCGGCCGCTTaGCCACGGGCGGCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: MGSGLQPSWPPAPLGHLSSCAAA*PRAARR
Trigger: CCGCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGA...GGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR TCA 90 bp CGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCAGGGGCGGCGGGAGGTaGGCGGACGTGGAACGGGCC +
Preference number: 4 (lower is better)
Translates to: RWAPSLLIHGPRAGVHSRRGGGR*ADVERA
Trigger: GGCCCGTTCCACGTCCGCTCACCTCCCGCCGCCCCT...GCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp GGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCACCCCAGCCCGCCTTGTCGTCCTaGGCGCCCGGCAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: GLQPSWPPAPLGHLSPPQPALSS*APGRIS
Trigger: GCTGATCCTGCCGGGCGCGCAGGACGACAAGGCGGG...CTGGGGTGGGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp CTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCCAGCTCCAGCTTCAGCTaGAGAAGCAGCGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LAMPSGRVPLSSTWGRRPSSSFS*RSSAAS
Trigger: GCTGGCCGCGCTGCTTCTGCAGCTGAAGCTGGAGCT...GGGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp GGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGTGGCCAGGAAGTTGCTaGGGCCGCGGCGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GWGCAQCGRSTGHVHAGLWPGSC*GRGAPG
Trigger: ACCTGGAGCGCCGCGGCCGCAGCAACTTCCTGGCCA...CAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp GGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGGCTTGGCCAGGAAGTTaGTGCGGCCGCGGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: GWGCAQCGRSTGHVHAGLAWPGS*CGRGAP
Trigger: TGGAGCGCCGCGGCCGCAGCAACTTCCTGGCCAAGC...CAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp TGGGCTGGGGGAGTTGGGCTGTCTCGCCACAGCCCGGGGCCAGGACGAAACGGATGCGAGCGGCGCCACTaGCGGCGCGTCTTGATGCCC +
Preference number: 4 (lower is better)
Translates to: WAGGVGLSRHSPGPGRNGCERRH*RRVLMP
Trigger: GGGCATCAAGACGCGCCGGCAGTGGCGCCGCTCGCA...TCCGTTTCGTCCTGGCCCCGGGCTGTGGCGAGACAGCCCAACTCCCCCAGCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp AGGGCCCCCACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCTGCGAGCGGCGCCACTaGCGGCGCGTCTTGATGCCC +
Preference number: 4 (lower is better)
Translates to: RAPTHGWAPDAGAWEAGFCERRH*RRVLMP
Trigger: GGGCATCAAGACGCGCCGGCAGTGGCGCCGCTCGCA...GAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGTGGGGGCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp GGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCACCCCAGTGCGAGCGGCGCCACTaGCGGCGCGTCTTGATGCCC +
Preference number: 4 (lower is better)
Translates to: GLQPSWPPAPLGHLSPPQCERRH*RRVLMP
Trigger: GGGCATCAAGACGCGCCGGCAGTGGCGCCGCTCGCA...CTGGGGTGGGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp CCACGCCGGGCAGCGCGTCCCGCAGCTCCGTCCAGCAGTAGCCGCGGGCGTACATTGATGTCGCAGAACTaGGAGCGGCGCCACTGCCGG +
Preference number: 4 (lower is better)
Translates to: PRRAARPAAPSSSSRGRTLMSQN*ERRHCR
Trigger: CCGGCAGTGGCGCCGCTCGCAGTTCTGCGACATCAA...TGTACGCCCGCGGCTACTGCTGGACGGAGCTGCGGGACGCGCTGCCCGGCGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR GCA 90 bp GGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCGCGTCGTGGTTGGACTaGGCCAGCGCCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GAWEAGFSLPGHRLHWATASWLD*ASAASS
Trigger: GCTGCTGGCGGCGCTGGCGCAGTCCAACCACGACGC...GGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp CGAAGGCCCCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCTGGGGTCCACGGTCTaGACCCCCGAGTCGCGCACC +
Preference number: 4 (lower is better)
Translates to: RRPQACGQRLGMRAVRAKLGSTV*TPESRT
Trigger: GGTGCGCGACTCGGGGGTGCAGACCGTGGACCCCAG...CTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp TCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCCCCCGAGGGAAGCCCTaGCCGGGCTGGCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SSYMGHALACTHALARLLPRGKP*PGWLCG
Trigger: CCCACAGAGCCAGCCCGGGCAGGGCTTCCCTCGGGG...GAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp AAGCCCTGCCCGGGCTGGCTCTGTGGGGTACGGGATTTCCTTCTCGGGGAGCGGCCCCGAGGGAAGCCCTaGCCGGGCTGGCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: KPCPGWLCGVRDFLLGERPRGKP*PGWLCG
Trigger: CCCACAGAGCCAGCCCGGGCAGGGCTTCCCTCGGGG...CCGCTCCCCGAGAAGGAAATCCCGTACCCCACAGAGCCAGCCCGGGCAGGGCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR GCA 90 bp CTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCCCGAAGGCCCCAGGCATaGGGACAGAGGTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: LAMPSGRVPLSSTWGRRPRRPQA*GQRLGM
Trigger: CATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCG...GGGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp CTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCACGCCAGTGCCTGGCGATaGCGTCCGGGCGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: LIHGPRAGVHSRTRPPAHASAWR*RPGGFP
Trigger: GGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGC...GTGAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCACGGCGGGGTTGGCGCTaGGGTCCACGGTCTGCACCC +
Preference number: 4 (lower is better)
Translates to: DRGWGCAQCGRSTGHVHARRGWR*GPRSAP
Trigger: GGGTGCAGACCGTGGACCCCAGCGCCAACCCCGCCG...TGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GATCAGCGTGTCCGTGGCCGTCTTCCTGCGCGCGGGCTTCGGCTTCTCCGCCTTCGGGCTCGGCGGGGTTaGCGCTGGGGTCCACGGTCT +
Preference number: 4 (lower is better)
Translates to: DQRVRGRLPARGLRLLRLRARRG*RWGPRS
Trigger: AGACCGTGGACCCCAGCGCCAACCCCGCCGAGCCCG...AAGGCGGAGAAGCCGAAGCCCGCGCGCAGGAAGACGGCCACGGACACGCTGATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CCA 90 bp CACCCCAGCCAGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGGCACCGCCTCGGCCTTaGCCTTCTTGGTGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: HPSQCLAMPSGRVPLSSTAPPRP*PSWCRG
Trigger: TCCTCGGCACCAAGAAGGCCAAGGCCGAGGCGGTGC...CGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GGGCGAAGGCCCCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGTGTCCACCGGGAGGCTaGCCAGGCCACACGACACAG +
Preference number: 4 (lower is better)
Translates to: GRRPQACGQRLGMRAVRACPPGG*PGHTTQ
Trigger: CTGTGTCGTGTGGCCTGGCCAGCCTCCCGGTGGACA...CGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGCCTCTTCCCTGGCTCTaGGCTGGGGGAGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GWGCAQCGRSTGHVHAGLPLPWL*AGGAGL
Trigger: CAGCCCAGCTCCCCCAGCCCAGAGCCAGGGAAGAGG...CAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp AGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGTGACCCCATGGGCGTaGCCACCCCACTGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: SAWRCRPGGFPCRARGGEVTPWA*PPHWWD
Trigger: GTCCCACCAGTGGGGTGGCCACGCCCATGGGGTCAC...TTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CACCCCAGCCAGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGACATGGGCCACGCGCTaGCGTGCACTCACGCACTCG +
Preference number: 4 (lower is better)
Translates to: HPSQCLAMPSGRVPLSSTTWATR*RALTHS
Trigger: CGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGT...CGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCACCCCAGCCACAGGAAGCCATGTaGCCTCAGCCGCGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GLQPSWPPAPLGHLSPPQPQEAM*PQPRRG
Trigger: CCCCCGCCGCGGCTGAGGCCACATGGCTTCCTGTGG...CTGGGGTGGGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR TCA 90 bp AGGGCCCCCACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCGCACGGTGCCGATGGTaGCCACCCGGTCGAACGGCA +
Preference number: 4 (lower is better)
Translates to: RAPTHGWAPDAGAWEAGFARCRW*PPGRTA
Trigger: TGCCGTTCGACCGGGTGGTCACCATCGGCACCGTGC...GAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGTGGGGGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR TCA 90 bp GGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCACCCCAGGCGCGGGCACGTACATaGTGGCGGCGAAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GLQPSWPPAPLGHLSPPQARART*WRRRPA
Trigger: TGCTGGCCTTCGCCGCCATCATGTACGTGCCCGCGC...CTGGGGTGGGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR TCA 90 bp CACCCCAGCCAGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGACTGCCGGCGCGTCTTaGTGCCCACCTTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: HPSQCLAMPSGRVPLSSTTAGAS*CPPCAA
Trigger: AGCTGCACAAGGTGGGCATCAAGACGCGCCGGCAGT...CGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR TCA 90 bp GGGCGAAGGCCCCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGGTGCACGTTGACCTTTaGCCCGAGGGTGGACCTCGG +
Preference number: 4 (lower is better)
Translates to: GRRPQACGQRLGMRAVRAVHVDL*PEGGPR
Trigger: CCGAGGTCCACCCTCGGGTCAAAGGTCAACGTGCAC...CGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp GACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCACCCGCCTTGTCGTCCTaGGCGCCCGGCAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: DRGWGCAQCGRSTGHVHAPALSS*APGRIS
Trigger: GCTGATCCTGCCGGGCGCGCAGGACGACAAGGCGGG...TGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp GGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCACCCCAGTGGCCAGGAAGTTGCTaGGGCCGCGGCGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GLQPSWPPAPLGHLSPPQWPGSC*GRGAPG
Trigger: ACCTGGAGCGCCGCGGCCGCAGCAACTTCCTGGCCA...CTGGGGTGGGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp GGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCACCCCAGGCTTGGCCAGGAAGTTaGTGCGGCCGCGGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: GLQPSWPPAPLGHLSPPQAWPGS*CGRGAP
Trigger: TGGAGCGCCGCGGCCGCAGCAACTTCCTGGCCAAGC...CTGGGGTGGGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp CCACGCCGGGCAGCGCGTCCCGCAGCTCCGTCCAGCAGTAGCCGCGGGCGTACAAGCAGGATCAGCACGTaGCGCGCCAGGTACAGCTTG +
Preference number: 4 (lower is better)
Translates to: PRRAARPAAPSSSSRGRTSRIST*RARYSL
Trigger: CAAGCTGTACCTGGCGCGGCACGTGCTGATCCTGCT...TGTACGCCCGCGGCTACTGCTGGACGGAGCTGCGGGACGCGCTGCCCGGCGTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR GCA 90 bp CCTGCCCGGGCTGGCTCTGTGGGGTACGGGATTTCCTTCTCGGGGAGCGGAGCAGCGTCGTGGTTGGACTaGGCCAGCGCCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PARAGSVGYGISFSGSGAASWLD*ASAASS
Trigger: GCTGCTGGCGGCGCTGGCGCAGTCCAACCACGACGC...TGCTCCGCTCCCCGAGAAGGAAATCCCGTACCCCACAGAGCCAGCCCGGGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR GCA 90 bp GGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCTGGGGATGCGCGCAGTaGGGGCGAAGCACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GQRLGMRAVRAKHRPRPRWGCAQ*GRSTGH
Trigger: GTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCA...GCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp GGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCACCCCAGTGGGGATGCGCGCAGTaGGGGCGAAGCACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GLQPSWPPAPLGHLSPPQWGCAQ*GRSTGH
Trigger: GTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCA...CTGGGGTGGGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp TTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCGCCAGTGCCTGGCGATaGCGTCCGGGCGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: FTPHTWATRWRALTHSPAASAWR*RPGGFP
Trigger: GGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGC...GGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp TGGGCTGGGGGAGTTGGGCTGTCTCGCCACAGCCCGGGGCCAGGACGAAACGGATCTGCTTCTCGATCTTaGGCGCGCGGCCCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: WAGGVGLSRHSPGPGRNGSASRS*ARGPRP
Trigger: CGGCCGAGGGCCGCGCGCCCAAGATCGAGAAGCAGA...TCCGTTTCGTCCTGGCCCCGGGCTGTGGCGAGACAGCCCAACTCCCCCAGCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGGGGTGGCGTCGTGGTTaGACTGCGCCAGCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: HSSYMGHALACTHALARLGWRRG*TAPAPP
Trigger: TGGCGGCGCTGGCGCAGTCCAACCACGACGCCACCC...CAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp TGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCGGGTGGCGTCGTGGTTaGACTGCGCCAGCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: WEAGFSLPGHRLHWATFPGWRRG*TAPAPP
Trigger: TGGCGGCGCTGGCGCAGTCCAACCACGACGCCACCC...GGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCACGCGCACCGTGGGGGTaGCGTCGTGGTTGGACTGCG +
Preference number: 4 (lower is better)
Translates to: DRGWGCAQCGRSTGHVHARAPWG*RRGWTA
Trigger: CGCAGTCCAACCACGACGCCACCCCCACGGTGCGCG...TGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp TCCCTCCCACCCGAGGGCATCAGGTCCCTGCAGGGGGTGACCCCTGAGCATGTGCCGAGTCGCGCACCGTaGGGGTGGCGTCGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SLPPEGIRSLQGVTPEHVPSRAP*GWRRGW
Trigger: CCAACCACGACGCCACCCCCACGGTGCGCGACTCGG...CACATGCTCAGGGGTCACCCCCTGCAGGGACCTGATGCCCTCGGGTGGGAGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CTGCGGCCGCGGCGCTCCAGGTACTTCTCGAACAGGTTCTGCTCCGGGCTCTTCCGGCGGGGTTGGCGCTaGGGTCCACGGTCTGCACCC +
Preference number: 4 (lower is better)
Translates to: LRPRRSRYFSNRFCSGLFRRGWR*GPRSAP
Trigger: GGGTGCAGACCGTGGACCCCAGCGCCAACCCCGCCG...GAAGAGCCCGGAGCAGAACCTGTTCGAGAAGTACCTGGAGCGCCGCGGCCGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CCA 90 bp GGGTGGGACCAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCCGGCCTTGGCCTTCTTaGTGCCGAGGATGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: GWDQPGAGRGSHRKPCGLRPWPS*CRGCRG
Trigger: ACCCCTACATCCTCGGCACCAAGAAGGCCAAGGCCG...GAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTGGTCCCACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CCACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCACCCCAGCCAGTGCCTaGCGATGCCGTCCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: PPTAGHLMQEHGKRASAFTPASA*RCRPGG
Trigger: CCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGT...GAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGACCCCAGCCAGTGCCTaGCGATGCCGTCCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GPFTPHTWATRWRALTHSTPASA*RCRPGG
Trigger: CCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGT...CGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCACCCCAGCCAGTGGCCCCCACCCACGGCTaGGCACCTGATGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: QPSWPPAPLGHLSPPQPVAPTHG*APDAGA
Trigger: TGCTCCTGCATCAGGTGCCCAGCCGTGGGTGGGGGC...CACTGGCTGGGGTGGGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp TGGGCTGGGGGAGTTGGGCTGTCTCGCCACAGCCCGGGGCCAGGACGAAACGGACTGGGCTGGGGGAGTTaGGCTGTCTCGCCACAGCCC +
Preference number: 4 (lower is better)
Translates to: WAGGVGLSRHSPGPGRNGLGWGS*AVSPQP
Trigger: GGGCTGTGGCGAGACAGCCCAACTCCCCCAGCCCAG...TCCGTTTCGTCCTGGCCCCGGGCTGTGGCGAGACAGCCCAACTCCCCCAGCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGCCCGGGTGGGGGACGTaGTTATTGCGTTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GWGCAQCGRSTGHVHAGLPGWGT*LLRWAP
Trigger: AGGGGCCCAACGCAATAACCACGTCCCCCACCCGGG...CAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCACCACAGGAAGCCATGTaGCCTCAGCCGCGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: DRGWGCAQCGRSTGHVHAPQEAM*PQPRRG
Trigger: CCCCCGCCGCGGCTGAGGCCACATGGCTTCCTGTGG...TGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR TCA 90 bp CACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGGCACGGTGCCGATGGTaGCCACCCGGTCGAACGGCA +
Preference number: 4 (lower is better)
Translates to: HSSYMGHALACTHALARLARCRW*PPGRTA
Trigger: TGCCGTTCGACCGGGTGGTCACCATCGGCACCGTGC...CAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR TCA 90 bp TCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCGCTTCTCGCGCTCCGTaGTGCCCGGGCCCTTGGACT +
Preference number: 4 (lower is better)
Translates to: SSYMGHALACTHALARLLASRAP*CPGPWT
Trigger: AGTCCAAGGGCCCGGGCATCACGGAGCGCGAGAAGC...GAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR TCA 90 bp GGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTGTCCACGCCCGCGATaGTGCGCTGCAGTTGCACGG +
Preference number: 4 (lower is better)
Translates to: GAWEAGFSLPGHRLHWATCPRPR*CAAVAR
Trigger: CCGTGCAACTGCAGCGCATCATCGCGGGCGTGGACA...GGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR TCA 90 bp GGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGACTGCCGGCGCGTCTTaGTGCCCACCTTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GWGCAQCGRSTGHVHAGLTAGAS*CPPCAA
Trigger: AGCTGCACAAGGTGGGCATCAAGACGCGCCGGCAGT...CAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR TCA 90 bp CCACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCGGAGCGGAGCATCTTTaGTGGGCGCCGGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PPTAGHLMQEHGKRASAFGAEHL*WAPGPG
Trigger: GCCTGGCCCCGGCGCCCATCAAAGATGCTCCGCTCC...GAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR TCA 90 bp CCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCGGAGAAAGTGCACGTTaGCCTTTGACCCGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PGDAVRAGSPVEHVGAKAGESAR*PLTRGW
Trigger: CCACCCTCGGGTCAAAGGTCAACGTGCACTTTCTCC...GGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp CCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCCCCTTGGACTGGATCTaGTTCTCGATCTTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: PGDAVRAGSPVEHVGAKAPLDWI*FSILGA
Trigger: CGCGCCCAAGATCGAGAAGCAGATCCAGTCCAAGGG...GGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp GGTGGGGATCCACTTCATCTTCTTGCGCGGCCGCTTGACCACGGGCGGCTCGGCTGGCCAGGAAGTTGCTaGGGCCGCGGCGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GGDPLHLLARPLDHGRLGWPGSC*GRGAPG
Trigger: ACCTGGAGCGCCGCGGCCGCAGCAACTTCCTGGCCA...GCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGAAGATGAAGTGGATCCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR GCA 90 bp CCACGCCGGGCAGCGCGTCCCGCAGCTCCGTCCAGCAGTAGCCGCGGGCGTACAATGATGCGCTGCAGTTaGACGGACGGGAGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: PRRAARPAAPSSSSRGRTMMRCS*TDGSLQ
Trigger: CTGCAAGCTCCCGTCCGTGCAACTGCAGCGCATCAT...TGTACGCCCGCGGCTACTGCTGGACGGAGCTGCGGGACGCGCTGCCCGGCGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR GCA 90 bp GGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGCGCCGCCAGCAGCTaGCGGACCACGTTGTCGTAC +
Preference number: 4 (lower is better)
Translates to: GQRLGMRAVRAKHRPRPRSAASS*RTTLSY
Trigger: GTACGACAACGTGGTCCGGCAGCTGCTGGCGGCGCT...GCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp GGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGGTGTGGCTCCTTGAAGGGCTaGGGAAGCGGGTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GDARSAGEAQATSTQGWCGSLKG*GSGLLV
Trigger: CACCAGCAACCCGCTTCCGCAGCCCTTCAAGGAGCC...ACACCAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp TCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCCCGTGGCCGTCTTCCTaGGCGCGGGCTTCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SSYMGHALACTHALARLLPWPSS*ARASAS
Trigger: AGAAGCCGAAGCCCGCGCGCAGGAAGACGGCCACGG...GAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp GGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCGAGAAGTGGCGCGCGTaGTTCTTGTCAGGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GQRLGMRAVRAKHRPRPREKWRA*FLSGAG
Trigger: GCCCGCCCCTGACAAGAAGCACGCGCGCCACTTCTC...GCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTTCTGCTTCTCGATCTTaGGCGCGCGGCCCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: ACGQRLGMRAVRAKHRPRSASRS*ARGPRP
Trigger: CGGCCGAGGGCCGCGCGCCCAAGATCGAGAAGCAGA...ACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp TCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGTGGGGGTGGCGTCGTaGTTGGACTGCGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SLLIHGPRAGVHSRTRPPVGVAS*LDCASA
Trigger: GGCGCTGGCGCAGTCCAACCACGACGCCACCCCCAC...AGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp AGCAGGAAGTTGAGCTCGGAGGTGAGGCGCGTGGAGGCCAGGAACTCCCAGCCCGTGGGGGTGGCGTCGTaGTTGGACTGCGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SRKLSSEVRRVEARNSQPVGVAS*LDCASA
Trigger: GGCGCTGGCGCAGTCCAACCACGACGCCACCCCCAC...GGGCTGGGAGTTCCTGGCCTCCACGCGCCTCACCTCCGAGCTCAACTTCCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CCA 90 bp TCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCCGATCAGCGTGTCCGTaGCCGTCTTCCTGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: SSYMGHALACTHALARLLRSACP*PSSCAR
Trigger: CCGCGCGCAGGAAGACGGCCACGGACACGCTGATCG...GAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GATCAGCGTGTCCGTGGCCGTCTTCCTGCGCGCGGGCTTCGGCTTCTCCGCCTTCGATCAGCGTGTCCGTaGCCGTCTTCCTGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: DQRVRGRLPARGLRLLRLRSACP*PSSCAR
Trigger: CCGCGCGCAGGAAGACGGCCACGGACACGCTGATCG...AAGGCGGAGAAGCCGAAGCCCGCGCGCAGGAAGACGGCCACGGACACGCTGATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CCA 90 bp CAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCACCCCAGCCAGTGGCACCGCCTCGGCCTTaGCCTTCTTGGTGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: QPSWPPAPLGHLSPPQPVAPPRP*PSWCRG
Trigger: TCCTCGGCACCAAGAAGGCCAAGGCCGAGGCGGTGC...CACTGGCTGGGGTGGGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCGCACCGCCTCGGCCTTaGCCTTCTTGGTGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: GQRLGMRAVRAKHRPRPRAPPRP*PSWCRG
Trigger: TCCTCGGCACCAAGAAGGCCAAGGCCGAGGCGGTGC...GCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp CGAAGGCCCCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCTTGCCCAGGCTGGCTaGTGTCAGAGGGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: RRPQACGQRLGMRAVRAKLAQAG*CQRGHS
Trigger: GCTGTGGCCCCTCTGACACCAGCCAGCCTGGGCAAG...CTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCCATGCGGACAGAGGTTaGGGATGCGCGCAGTGCGGG +
Preference number: 4 (lower is better)
Translates to: GQRLGMRAVRAKHRPRPRHADRG*GCAQCG
Trigger: CCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATG...GCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCTGGGCTGGGGGAGTTaGGCTGTCTCGCCACAGCCC +
Preference number: 4 (lower is better)
Translates to: ACGQRLGMRAVRAKHRPRLGWGS*AVSPQP
Trigger: GGGCTGTGGCGAGACAGCCCAACTCCCCCAGCCCAG...ACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GGACCAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCAGCCGTTCACTCCTCATACATaGGCCACGCGCTGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: GPAGCRPGLPQEAMWPQPFTPHT*ATRWRA
Trigger: TGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAA...CGGCTGAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCACCCCAGCCCGGGTGGGGGACGTaGTTATTGCGTTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GLQPSWPPAPLGHLSPPQPGWGT*LLRWAP
Trigger: AGGGGCCCAACGCAATAACCACGTCCCCCACCCGGG...CTGGGGTGGGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR CAA 72 bp GGAAGCGGGTTGCTGGTGGGGATCCACTTCATCTTCTaGCGCGGCCGCTTGACCACGGGCGGCTCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: GSGLLVGIHFIF*RGRLTTGGSAA
Trigger: CGCCGCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGAAGATGAAGTGGATCCCCACCAGCAACCCGCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CAA 72 bp GCCGTCTTCCTGCGCGCGGGCTTCGGCTTCTCCGCCTaGCTGTTCTCCACGCGCATGATGGCCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: AVFLRAGFGFSA*LFSTRMMASGS
Trigger: GGAGCCGCTGGCCATCATGCGCGTGGAGAACAGCAAGGCGGAGAAGCCGAAGCCCGCGCGCAGGAAGACGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR TCA 90 bp TCCCTCCCACCCGAGGGCATCAGGTCCCTGCAGGGGGTGACCCCTGAGCATGTGCGCCCAGCGCGCAGGTaGACTCGTTCTGCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: SLPPEGIRSLQGVTPEHVRPARR*TRSASA
Trigger: CGCAGAAGCAGAACGAGTTCACCTGCGCGCTGGGCG...CACATGCTCAGGGGTCACCCCCTGCAGGGACCTGATGCCCTCGGGTGGGAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR TCA 90 bp CTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCACTGTCCACGCCCGCGATaGTGCGCTGCAGTTGCACGG +
Preference number: 4 (lower is better)
Translates to: LIHGPRAGVHSRTRPPAHCPRPR*CAAVAR
Trigger: CCGTGCAACTGCAGCGCATCATCGCGGGCGTGGACA...GTGAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR TCA 90 bp CCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCACATGGCCAGGATGTTaGTGTCGCAGAACTGCGAGC +
Preference number: 4 (lower is better)
Translates to: PGDAVRAGSPVEHVGAKATWPGC*CRRTAS
Trigger: GCTCGCAGTTCTGCGACATCAACATCCTGGCCATGT...GGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR TCA 90 bp GGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGTGGCCAGCGGCTCCTTaGAGGGCTGCGGAAGCGGGT +
Preference number: 4 (lower is better)
Translates to: GPFTPHTWATRWRALTHSWPAAP*RAAEAG
Trigger: ACCCGCTTCCGCAGCCCTTCAAGGAGCCGCTGGCCA...CGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR TCA 90 bp GCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTTTCGGCTCAGGATGGTaGGGGGCTCCGCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: ACGQRLGMRAVRAKHRPRFGSGW*GAPPCP
Trigger: TGGGCAAGGCGGAGCCCCTCACCATCCTGAGCCGAA...ACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp TGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCCCGCGATGATGCGCTaGAGTTGCACGGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: WEAGFSLPGHRLHWATFPPAMMR*SCTDGS
Trigger: GCTCCCGTCCGTGCAACTGCAGCGCATCATCGCGGG...GGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp CCTGCCCGGGCTGGCTCTGTGGGGTACGGGATTTCCTTCTCGGGGAGCGGAGCAAGCGCCGCCAGCAGCTaGCGGACCACGTTGTCGTAC +
Preference number: 4 (lower is better)
Translates to: PARAGSVGYGISFSGSGASAASS*RTTLSY
Trigger: GTACGACAACGTGGTCCGGCAGCTGCTGGCGGCGCT...TGCTCCGCTCCCCGAGAAGGAAATCCCGTACCCCACAGAGCCAGCCCGGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR GCA 90 bp TGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGGTGGCTGCGGAAGCGGGTTaGTGGTGGGGATCCACTTCA +
Preference number: 4 (lower is better)
Translates to: WGCAQCGRSTGHVHAGLVAAEAG*WWGSTS
Trigger: TGAAGTGGATCCCCACCAGCAACCCGCTTCCGCAGC...CACCAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp CCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCGGCTCCTTGAAGGGCTaGGGAAGCGGGTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PGMRTEVGDARSAGEAQAGSLKG*GSGLLV
Trigger: CACCAGCAACCCGCTTCCGCAGCCCTTCAAGGAGCC...GGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp ATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCGTGGCCGTCTTCCTaGGCGCGGGCTTCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: MGSGLQPSWPPAPLGHLSPWPSS*ARASAS
Trigger: AGAAGCCGAAGCCCGCGCGCAGGAAGACGGCCACGG...GGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp GGAAGCCCTGCCCGGGCTGGCTCTGTGGGGTACGGGATTTCCTTCTCGGGGAGCGAGAAGTGGCGCGCGTaGTTCTTGTCAGGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GSPARAGSVGYGISFSGSEKWRA*FLSGAG
Trigger: GCCCGCCCCTGACAAGAAGCACGCGCGCCACTTCTC...GCTCCCCGAGAAGGAAATCCCGTACCCCACAGAGCCAGCCCGGGCAGGGCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR GCA 90 bp CTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCTGGGGATGCGCGCAGTaGGGGCGAAGCACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: LHSSYMGHALACTHALARWGCAQ*GRSTGH
Trigger: GTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCA...GCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp TCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCGACAGAGGTTGGGGATaGGCGCAGTGCGGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: SSYMGHALACTHALARLLDRGWG*AQCGRS
Trigger: GCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTC...GAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp GGGCCCGGGTGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATCCCCACCCCAGCCAGTaGCTGGCGATGCCGTCCGGG +
Preference number: 4 (lower is better)
Translates to: GPGWGTWLLRWAPSLLIHPHPSQ*LAMPSG
Trigger: CCCGGACGGCATCGCCAGGCACTGGCTGGGGTGGGG...ATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCACCCGGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CCACCCCAGCCAGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACCCCGGGCCCTTGGACTaGATCTGCTTCTCGATCTTG +
Preference number: 4 (lower is better)
Translates to: PPQPVPGDAVRAGSPVEHPGPLD*ICFSIL
Trigger: CAAGATCGAGAAGCAGATCCAGTCCAAGGGCCCGGG...GTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GGGTGGGACCAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCCGTTCTGCTTCTGCGTaGCGTAGTAGGTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: GWDQPGAGRGSHRKPCGLRSASA*RSRCTG
Trigger: ACCTGTGCACCTACTACGCCACGCAGAAGCAGAACG...GAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTGGTCCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp TTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCCGATCAGCGTGTCCGTaGCCGTCTTCCTGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: FTPHTWATRWRALTHSPARSACP*PSSCAR
Trigger: CCGCGCGCAGGAAGACGGCCACGGACACGCTGATCG...GGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGGTGTCGGCCTTGGCCTTCTTaGTGCCGAGGATGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: GDARSAGEAQATSTQGWCRPWPS*CRGCRG
Trigger: ACCCCTACATCCTCGGCACCAAGAAGGCCAAGGCCG...ACACCAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp CCACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCCGCCTTGCCCAGGCTaGCTGGTGTCAGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PPTAGHLMQEHGKRASAFPPCPG*LVSEGP
Trigger: TGGCCCCTCTGACACCAGCCAGCCTGGGCAAGGCGG...GAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCGCCTTGCCCAGGCTaGCTGGTGTCAGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GPFTPHTWATRWRALTHSPPCPG*LVSEGP
Trigger: TGGCCCCTCTGACACCAGCCAGCCTGGGCAAGGCGG...CGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTGGGCTCTCGGCGGCCTaGACGGTGCCATCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: ACGQRLGMRAVRAKHRPRGLSAA*TVPSLK
Trigger: TTTGAGGGATGGCACCGTCCAGGCCGCCGAGAGCCC...ACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp TCCCTCCCACCCGAGGGCATCAGGTCCCTGCAGGGGGTGACCCCTGAGCATGTGGGGCTCTCGGCGGCCTaGACGGTGCCATCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: SLPPEGIRSLQGVTPEHVGLSAA*TVPSLK
Trigger: TTTGAGGGATGGCACCGTCCAGGCCGCCGAGAGCCC...CACATGCTCAGGGGTCACCCCCTGCAGGGACCTGATGCCCTCGGGTGGGAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp AAGTTGAGCTCGGAGGTGAGGCGCGTGGAGGCCAGGAACTCCCAGCCCAGCGCGGGGCTCTCGGCGGCCTaGACGGTGCCATCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: KLSSEVRRVEARNSQPSAGLSAA*TVPSLK
Trigger: TTTGAGGGATGGCACCGTCCAGGCCGCCGAGAGCCC...CGCGCTGGGCTGGGAGTTCCTGGCCTCCACGCGCCTCACCTCCGAGCTCAACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CCA 90 bp GGTGGGGATCCACTTCATCTTCTTGCGCGGCCGCTTGACCACGGGCGGCTCGGCTGTCCACCGGGAGGCTaGCCAGGCCACACGACACAG +
Preference number: 4 (lower is better)
Translates to: GGDPLHLLARPLDHGRLGCPPGG*PGHTTQ
Trigger: CTGTGTCGTGTGGCCTGGCCAGCCTCCCGGTGGACA...GCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGAAGATGAAGTGGATCCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CCA 90 bp GCGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGGCCCCCACCCACGGCTaGGCACCTGATGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: ALGPFTPHTWATRWRALTAPTHG*APDAGA
Trigger: TGCTCCTGCATCAGGTGCCCAGCCGTGGGTGGGGGC...CGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp TGGGCTGGGGGAGTTGGGCTGTCTCGCCACAGCCCGGGGCCAGGACGAAACGGACACCTTCCTCTTCCCTaGCTCTGGGCTGGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: WAGGVGLSRHSPGPGRNGHLPLP*LWAGGA
Trigger: AGCTCCCCCAGCCCAGAGCCAGGGAAGAGGAAGGTG...TCCGTTTCGTCCTGGCCCCGGGCTGTGGCGAGACAGCCCAACTCCCCCAGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCCACCTTCCTCTTCCCTaGCTCTGGGCTGGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PGMRTEVGDARSAGEAQAHLPLP*LWAGGA
Trigger: AGCTCCCCCAGCCCAGAGCCAGGGAAGAGGAAGGTG...GGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCACCTGAGGTATTTGGGGTaGGACCAGCCGGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: LIHGPRAGVHSRTRPPAHLRYLG*DQPGAG
Trigger: GCCGGCACCCGGCTGGTCCCACCCCAAATACCTCAG...GTGAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR CAA 72 bp CAGCACGATGTCCACGCCCGCGATGATGCGCTGCAGTaGCACGGACGGGAGCTTGCAGCTCACGCGCACCGC +
Preference number: 4 (lower is better)
Translates to: QHDVHARDDALQ*HGRELAAHAHR
Trigger: GCGGTGCGCGTGAGCTGCAAGCTCCCGTCCGTGCAACTGCAGCGCATCATCGCGGGCGTGGACATCGTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR TCA 90 bp ATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCGCGCCTGGTCGCGCGTaGAGTTGTGCGGGGTGTAAC +
Preference number: 4 (lower is better)
Translates to: MGSGLQPSWPPAPLGHLSAPGRA*SCAGCN
Trigger: GTTACACCCCGCACAACTTCACGCGCGACCAGGCGC...GGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR TCA 90 bp CCACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCGCCCAGCGCGCAGGTaGACTCGTTCTGCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: PPTAGHLMQEHGKRASAFRPARR*TRSASA
Trigger: CGCAGAAGCAGAACGAGTTCACCTGCGCGCTGGGCG...GAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR TCA 90 bp CACCCCAGCCAGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGATGAGGATAGCGTGTTaGTGTGCAGCAGCGGGTGTG +
Preference number: 4 (lower is better)
Translates to: HPSQCLAMPSGRVPLSSTMRIAC*CAAAGV
Trigger: CACACCCGCTGCTGCACATCAACACGCTATCCTCAT...CGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000402472.2
CDS-3UTR TCA 90 bp GGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGGTGTCATGGTCTCCATGGCTaGGGTATTTGGGGTGGGACC +
Preference number: 4 (lower is better)
Translates to: GDARSAGEAQATSTQGWCHGLHG*GIWGGT
Trigger: GGTCCCACCCCAAATACCTCAGCCATGGAGACCATG...ACACCAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR TCA 90 bp CGAAGGCCCCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCCTCGTACAGCGTGTTaGTGTGCAGCAGCGGGTGTG +
Preference number: 4 (lower is better)
Translates to: RRPQACGQRLGMRAVRAKPRTAC*CAAAGV
Trigger: CACACCCGCTGCTGCACATCAACACGCTGTACGAGG...CTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395842.3
CDS-3UTR TCA 90 bp GCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCGTCGAAGGTGGCGATaGGGATCTGCTGTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: ACGQRLGMRAVRAKHRPRRRRWR*GSAVGQ
Trigger: CTGCCCCACAGCAGATCCTCATCGCCACCTTCGACG...ACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395842.3
CDS-3UTR GCA 90 bp GACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCATTGATGTCGCAGAACTaGGAGCGGCGCCACTGCCGG +
Preference number: 4 (lower is better)
Translates to: DRGWGCAQCGRSTGHVHALMSQN*ERRHCR
Trigger: CCGGCAGTGGCGCCGCTCGCAGTTCTGCGACATCAA...TGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp GGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGGTGTGATAGCGTGTTGATGTaGAGCAGCGGGTGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: GDARSAGEAQATSTQGWCDSVLM*SSGCVA
Trigger: CGCCACACACCCGCTGCTGCACATCAACACGCTATC...ACACCAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000402472.2
CDS-3UTR GCA 90 bp TCCCTCCCACCCGAGGGCATCAGGTCCCTGCAGGGGGTGACCCCTGAGCATGTGCGAAGGCCCCAGGCATaGGGACAGAGGTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: SLPPEGIRSLQGVTPEHVRRPQA*GQRLGM
Trigger: CATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCG...CACATGCTCAGGGGTCACCCCCTGCAGGGACCTGATGCCCTCGGGTGGGAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp GACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCACGAAGGCCCCAGGCATaGGGACAGAGGTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: DRGWGCAQCGRSTGHVHARRPQA*GQRLGM
Trigger: CATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCG...TGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp TGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGGTGCCCGGGCCCTTGGACTaGATCTGCTTCTCGATCTTG +
Preference number: 4 (lower is better)
Translates to: WGCAQCGRSTGHVHAGLVPGPLD*ICFSIL
Trigger: CAAGATCGAGAAGCAGATCCAGTCCAAGGGCCCGGG...CACCAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp AGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAACCCGGGCCCTTGGACTaGATCTGCTTCTCGATCTTG +
Preference number: 4 (lower is better)
Translates to: SAWRCRPGGFPCRARGGEPGPLD*ICFSIL
Trigger: CAAGATCGAGAAGCAGATCCAGTCCAAGGGCCCGGG...TTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp CTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCCTTGAGCGACTTGATGTaGTCGCGGTTCTCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LAMPSGRVPLSSTWGRRPLSDLM*SRFSLQ
Trigger: CTGCAACGAGAACCGCGACCACATCAAGTCGCTCAA...GGGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GGGCCCGGGTGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATCGCGCACCGTGGGGGTaGCGTCGTGGTTGGACTGCG +
Preference number: 4 (lower is better)
Translates to: GPGWGTWLLRWAPSLLIHRAPWG*RRGWTA
Trigger: CGCAGTCCAACCACGACGCCACCCCCACGGTGCGCG...ATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCACCCGGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp TGCACGTTGACCTTTGACCCGAGGGTGGACCTCGGTCCCTCCCACCCGAGGGCAAAGCCCTGCCCGGGCTaGCTCTGTGGGGTACGGGAT +
Preference number: 4 (lower is better)
Translates to: CTLTFDPRVDLGPSHPRAKPCPG*LCGVRD
Trigger: ATCCCGTACCCCACAGAGCCAGCCCGGGCAGGGCTT...TGCCCTCGGGTGGGAGGGACCGAGGTCCACCCTCGGGTCAAAGGTCAACGTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCCTTGCCCAGGCTGGCTaGTGTCAGAGGGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: RWAPSLLIHGPRAGVHSRLAQAG*CQRGHS
Trigger: GCTGTGGCCCCTCTGACACCAGCCAGCCTGGGCAAG...GCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCCATGCGGACAGAGGTTaGGGATGCGCGCAGTGCGGG +
Preference number: 4 (lower is better)
Translates to: RWAPSLLIHGPRAGVHSRHADRG*GCAQCG
Trigger: CCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATG...GCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGTGGCCACCCCACTGGTaGGACTGGCCCCACCTTCCT +
Preference number: 4 (lower is better)
Translates to: GPFTPHTWATRWRALTHSWPPHW*DWPHLP
Trigger: AGGAAGGTGGGGCCAGTCCCACCAGTGGGGTGGCCA...CGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp TCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGAGCATGTGACCCCATaGGCGTGGCCACCCCACTGG +
Preference number: 4 (lower is better)
Translates to: SLLIHGPRAGVHSRTRPPEHVTP*AWPPHW
Trigger: CCAGTGGGGTGGCCACGCCCATGGGGTCACATGCTC...AGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp TGCACGTTGACCTTTGACCCGAGGGTGGACCTCGGTCCCTCCCACCCGAGGGCACCTTTGACCCGAGGGTaGACCTCGGTCCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: CTLTFDPRVDLGPSHPRAPLTRG*TSVPPT
Trigger: GGTGGGAGGGACCGAGGTCCACCCTCGGGTCAAAGG...TGCCCTCGGGTGGGAGGGACCGAGGTCCACCCTCGGGTCAAAGGTCAACGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR CAA 72 bp ATCTCGCGCTTCTCGCGCTCCGTGATGCCCGGGCCCTaGGACTGGATCTGCTTCTCGATCTTGGGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: ISRFSRSVMPGP*DWICFSILGAR
Trigger: CCGCGCGCCCAAGATCGAGAAGCAGATCCAGTCCAAGGGCCCGGGCATCACGGAGCGCGAGAAGCGCGAGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR TCA 90 bp GATCAGCGTGTCCGTGGCCGTCTTCCTGCGCGCGGGCTTCGGCTTCTCCGCCTTTCTCCGCGTTCTCGATaGTCTCGCGCTTCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: DQRVRGRLPARGLRLLRLSPRSR*SRASRA
Trigger: AGCGCGAGAAGCGCGAGATCATCGAGAACGCGGAGA...AAGGCGGAGAAGCCGAAGCCCGCGCGCAGGAAGACGGCCACGGACACGCTGATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR TCA 90 bp ACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCTCGCCCAGCGCGCAGGTaGACTCGTTCTGCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: THGWAPDAGAWEAGFSLPRPARR*TRSASA
Trigger: CGCAGAAGCAGAACGAGTTCACCTGCGCGCTGGGCG...AGGAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR TCA 90 bp GGGTGGGACCAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCGCAGCTTGTCGAAGATaGAGTTGCTCTTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: GWDQPGAGRGSHRKPCGLAACRR*SCSCGR
Trigger: TCTTCCGCAAGAGCAACTTCATCTTCGACAAGCTGC...GAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTGGTCCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR TCA 90 bp CTGCGGCCGCGGCGCTCCAGGTACTTCTCGAACAGGTTCTGCTCCGGGCTCTTCACTGCCGGCGCGTCTTaGTGCCCACCTTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LRPRRSRYFSNRFCSGLFTAGAS*CPPCAA
Trigger: AGCTGCACAAGGTGGGCATCAAGACGCGCCGGCAGT...GAAGAGCCCGGAGCAGAACCTGTTCGAGAAGTACCTGGAGCGCCGCGGCCGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR TCA 90 bp CACTTCATCTTCTTGCGCGGCCGCTTGACCACGGGCGGCTCGGCGGCGCCGTCGACATGGCCAGGATGTTaGTGTCGCAGAACTGCGAGC +
Preference number: 4 (lower is better)
Translates to: HFIFLRGRLTTGGSAAPSTWPGC*CRRTAS
Trigger: GCTCGCAGTTCTGCGACATCAACATCCTGGCCATGT...CGACGGCGCCGCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGAAGATGAAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR TCA 90 bp GGGCCCGGGTGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATTGGCCAGCGGCTCCTTaGAGGGCTGCGGAAGCGGGT +
Preference number: 4 (lower is better)
Translates to: GPGWGTWLLRWAPSLLIHWPAAP*RAAEAG
Trigger: ACCCGCTTCCGCAGCCCTTCAAGGAGCCGCTGGCCA...ATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCACCCGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR TCA 90 bp CGAAGGCCCCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCATGGTCTCCATGGCTaGGGTATTTGGGGTGGGACC +
Preference number: 4 (lower is better)
Translates to: RRPQACGQRLGMRAVRAKHGLHG*GIWGGT
Trigger: GGTCCCACCCCAAATACCTCAGCCATGGAGACCATG...CTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp TGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCCCCGCCTTGTCGTCCTaGGCGCCCGGCAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: WGTWLLRWAPSLLIHGPRPALSS*APGRIS
Trigger: GCTGATCCTGCCGGGCGCGCAGGACGACAAGGCGGG...GCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp ATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGAGCTCCAGCTTCAGCTaGAGAAGCAGCGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: MQEHGKRASAFLATGSTGSSSFS*RSSAAS
Trigger: GCTGGCCGCGCTGCTTCTGCAGCTGAAGCTGGAGCT...CCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCCTGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp GGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCCCCTTGGACTGGATCTaGTTCTCGATCTTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: GAWEAGFSLPGHRLHWATPLDWI*FSILGA
Trigger: CGCGCCCAAGATCGAGAAGCAGATCCAGTCCAAGGG...GGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp GCGGCGCCACTGCCGGCGCGTCTTGATGCCCACCTTGTGCAGCTTGTCGAAGATCCCGCGATGATGCGCTaGAGTTGCACGGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: AAPLPARLDAHLVQLVEDPAMMR*SCTDGS
Trigger: GCTCCCGTCCGTGCAACTGCAGCGCATCATCGCGGG...ATCTTCGACAAGCTGCACAAGGTGGGCATCAAGACGCGCCGGCAGTGGCGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR GCA 90 bp TGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGGTGGGTCGCGGTTCTCGTTaGAGAACATGGCCAGGATGT +
Preference number: 4 (lower is better)
Translates to: WGCAQCGRSTGHVHAGLVGRGSR*RTWPGC
Trigger: ACATCCTGGCCATGTTCTGCAACGAGAACCGCGACC...CACCAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp CTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCGGCGGCCTGGACGGTaGCATCCCTCAAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: LHSSYMGHALACTHALARRRPGR*HPSKLH
Trigger: GTGGAGTTTTGAGGGATGGCACCGTCCAGGCCGCCG...GCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp CGAAGGCCCCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGTACAGCGTGTTGATGTaGAGCAGCGGGTGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: RRPQACGQRLGMRAVRAKYSVLM*SSGCVA
Trigger: CGCCACACACCCGCTGCTGCACATCAACACGCTGTA...CTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395842.3
CDS-3UTR CCA 90 bp TGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCTGCACAGGTAGGAGATaGGCACGGCGCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: WEAGFSLPGHRLHWATFPCTGRR*ARRSAA
Trigger: TGCTGCTGAGCGCCGTGCCCATCTCCTACCTGTGCA...GGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCATGCACAGGTAGGAGATaGGCACGGCGCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: DRGWGCAQCGRSTGHVHACTGRR*ARRSAA
Trigger: TGCTGCTGAGCGCCGTGCCCATCTCCTACCTGTGCA...TGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp CTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCCCGGAAGATGAAGAGGTaGATGAGGTTGACGAGGATG +
Preference number: 4 (lower is better)
Translates to: LAMPSGRVPLSSTWGRRPRKMKR*MRLTRM
Trigger: CATCCTCGTCAACCTCATCCACCTCTTCATCTTCCG...GGGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GGGCGAAGGCCCCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGGAAGCGGGTTGCTGGTaGGGATCCACTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GRRPQACGQRLGMRAVRAEAGCW*GSTSSS
Trigger: AGAAGATGAAGTGGATCCCCACCAGCAACCCGCTTC...CGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp CCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCGCGGAAGCGGGTTGCTaGTGGGGATCCACTTCATCT +
Preference number: 4 (lower is better)
Translates to: PGMRTEVGDARSAGEAQAAEAGC*WGSTSS
Trigger: AGATGAAGTGGATCCCCACCAGCAACCCGCTTCCGC...GGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp AGGGCCCCCACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCACGTCCAGGGAGAAGTaGCGCGCGTGCTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: RAPTHGWAPDAGAWEAGFTSREK*RACFLS
Trigger: TGACAAGAAGCACGCGCGCCACTTCTCCCTGGACGT...GAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGTGGGGGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp ACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCTAAGCCCTGCCCGGGCTaGCTCTGTGGGGTACGGGAT +
Preference number: 4 (lower is better)
Translates to: THGWAPDAGAWEAGFSLPKPCPG*LCGVRD
Trigger: ATCCCGTACCCCACAGAGCCAGCCCGGGCAGGGCTT...AGGAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp TGCGGCCGCGGCGCTCCAGGTACTTCTCGAACAGGTTCTGCTCCGGGCTCTTCTCTTGCCCAGGCTGGCTaGTGTCAGAGGGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: CGRGAPGTSRTGSAPGSSLAQAG*CQRGHS
Trigger: GCTGTGGCCCCTCTGACACCAGCCAGCCTGGGCAAG...AGAAGAGCCCGGAGCAGAACCTGTTCGAGAAGTACCTGGAGCGCCGCGGCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CCA 90 bp CTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCGCAGCAGCGGGTGTGTaGCGTTTCGGCTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: LHSSYMGHALACTHALARAAAGV*RFGSGW
Trigger: CCATCCTGAGCCGAAACGCCACACACCCGCTGCTGC...GCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GGGCCCGGGTGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATACGTCCACGCAGGGCTaGTGTCCACCGGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GPGWGTWLLRWAPSLLIHTSTQG*CPPGGW
Trigger: CCAGCCTCCCGGTGGACACCAGCCCTGCGTGGACGT...ATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCACCCGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGCCTCTTCCCTGGCTCTaGGCTGGGGGAGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RGYCVGPLHSSYMGHALAPLPWL*AGGAGL
Trigger: CAGCCCAGCTCCCCCAGCCCAGAGCCAGGGAAGAGG...CGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp ACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCTCCCCACTGGTGGGACTaGCCCCACCTTCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: THGWAPDAGAWEAGFSLPPHWWD*PHLPLP
Trigger: GGGAAGAGGAAGGTGGGGCCAGTCCCACCAGTGGGG...AGGAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCACCCCAGCCAGTGTTCACTCCTCATACATaGGCCACGCGCTGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: QPSWPPAPLGHLSPPQPVFTPHT*ATRWRA
Trigger: TGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAA...CACTGGCTGGGGTGGGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp ACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCTCTGAGGTATTTGGGGTaGGACCAGCCGGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: THGWAPDAGAWEAGFSLPLRYLG*DQPGAG
Trigger: GCCGGCACCCGGCTGGTCCCACCCCAAATACCTCAG...AGGAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR TCA 90 bp GCGGGCGTACAGCGCCTGGTCGCGCGTGAAGTTGTGCGGGGTGTAACAGTAAATGCTTCTCGCGCTCCGTaGTGCCCGGGCCCTTGGACT +
Preference number: 4 (lower is better)
Translates to: AGVQRLVAREVVRGVTVNASRAP*CPGPWT
Trigger: AGTCCAAGGGCCCGGGCATCACGGAGCGCGAGAAGC...ATTTACTGTTACACCCCGCACAACTTCACGCGCGACCAGGCGCTGTACGCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR TCA 90 bp TCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTTCTCCGCGTTCTCGATaGTCTCGCGCTTCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: SLLIHGPRAGVHSRTRPPSPRSR*SRASRA
Trigger: AGCGCGAGAAGCGCGAGATCATCGAGAACGCGGAGA...AGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR TCA 90 bp ATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGTCTCCGCGTTCTCGATaGTCTCGCGCTTCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: MQEHGKRASAFLATGSTGSPRSR*SRASRA
Trigger: AGCGCGAGAAGCGCGAGATCATCGAGAACGCGGAGA...CCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCCTGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR TCA 90 bp CACCCCAGCCAGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGGCAGCTTGTCGAAGATaGAGTTGCTCTTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: HPSQCLAMPSGRVPLSSTAACRR*SCSCGR
Trigger: TCTTCCGCAAGAGCAACTTCATCTTCGACAAGCTGC...CGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR TCA 90 bp AACTCCACAGTACTCACGACCGTTCTCGGCTCGTCGAAGGTGGCGATGAGGATAAGGGGCGGCGGGAGGTaGGCGGACGTGGAACGGGCC +
Preference number: 4 (lower is better)
Translates to: NSTVLTTVLGSSKVAMRIRGGGR*ADVERA
Trigger: GGCCCGTTCCACGTCCGCTCACCTCCCGCCGCCCCT...TATCCTCATCGCCACCTTCGACGAGCCGAGAACGGTCGTGAGTACTGTGGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR TCA 90 bp CCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCATGAGGATAGCGTGTTaGTGTGCAGCAGCGGGTGTG +
Preference number: 4 (lower is better)
Translates to: PGMRTEVGDARSAGEAQAMRIAC*CAAAGV
Trigger: CACACCCGCTGCTGCACATCAACACGCTATCCTCAT...GGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000402472.2
CDS-3UTR GCA 90 bp GGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGGTGTCAGTTGTCGATCTCCTaGAGCAGGAAGTTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: GDARSAGEAQATSTQGWCQLSIS*SRKLSS
Trigger: CGAGCTCAACTTCCTGCTGCAGGAGATCGACAACTG...ACACCAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp GCGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGAGCAGGATCAGCACGTaGCGCGCCAGGTACAGCTTG +
Preference number: 4 (lower is better)
Translates to: ALGPFTPHTWATRWRALTSRIST*RARYSL
Trigger: CAAGCTGTACCTGGCGCGGCACGTGCTGATCCTGCT...CGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp CACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGATGATGCGCTGCAGTTaGACGGACGGGAGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: HSSYMGHALACTHALARLMMRCS*TDGSLQ
Trigger: CTGCAAGCTCCCGTCCGTGCAACTGCAGCGCATCAT...CAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp TCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCATGATGCGCTGCAGTTaGACGGACGGGAGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SSYMGHALACTHALARLLMMRCS*TDGSLQ
Trigger: CTGCAAGCTCCCGTCCGTGCAACTGCAGCGCATCAT...GAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp TGCACGTTGACCTTTGACCCGAGGGTGGACCTCGGTCCCTCCCACCCGAGGGCAGCTGCGGAAGCGGGTTaGTGGTGGGGATCCACTTCA +
Preference number: 4 (lower is better)
Translates to: CTLTFDPRVDLGPSHPRAAAEAG*WWGSTS
Trigger: TGAAGTGGATCCCCACCAGCAACCCGCTTCCGCAGC...TGCCCTCGGGTGGGAGGGACCGAGGTCCACCCTCGGGTCAAAGGTCAACGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp GACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCACCTTGGCCTTCTTGGTaGCGAGGATGTAGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: DRGWGCAQCGRSTGHVHAPWPSW*RGCRGA
Trigger: TGCACCCCTACATCCTCGGCACCAAGAAGGCCAAGG...TGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp TGCACGTTGACCTTTGACCCGAGGGTGGACCTCGGTCCCTCCCACCCGAGGGCAGCACCACACCCTCTGTaGACACGCACACACGTGCAC +
Preference number: 4 (lower is better)
Translates to: CTLTFDPRVDLGPSHPRAAPHPL*TRTHVH
Trigger: GTGCACGTGTGTGCGTGTGCACAGAGGGTGTGGTGC...TGCCCTCGGGTGGGAGGGACCGAGGTCCACCCTCGGGTCAAAGGTCAACGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp CGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCGGGGGACGTGGTTATTaGGTTGGGCCCCTTCACTCC +
Preference number: 4 (lower is better)
Translates to: RWAPSLLIHGPRAGVHSRGGRGY*VGPLHS
Trigger: GGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCC...GCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCAGCCGCGGCGGGTGTAACAGTAAATaGGTTCCTCTGCGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: QPGAGRGSHRKPCGLSRGGCNSK*VPLRSS
Trigger: AGAACTTCGCAGAGGAACCCATTTACTGTTACACCC...GCCGCGGCTGAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GGGCCCGGGTGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATCGGGCGTACAGCGCCTaGTCGCGCGTGAAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: GPGWGTWLLRWAPSLLIHRAYSA*SRVKLC
Trigger: GCACAACTTCACGCGCGACCAGGCGCTGTACGCCCG...ATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCACCCGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GCGGGCGTACAGCGCCTGGTCGCGCGTGAAGTTGTGCGGGGTGTAACAGTAAATTCTGCTTCTCGATCTTaGGCGCGCGGCCCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: AGVQRLVAREVVRGVTVNSASRS*ARGPRP
Trigger: CGGCCGAGGGCCGCGCGCCCAAGATCGAGAAGCAGA...ATTTACTGTTACACCCCGCACAACTTCACGCGCGACCAGGCGCTGTACGCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CCA 90 bp GCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTGCGGAAGCGGGTTGCTaGTGGGGATCCACTTCATCT +
Preference number: 4 (lower is better)
Translates to: ACGQRLGMRAVRAKHRPRAEAGC*WGSTSS
Trigger: AGATGAAGTGGATCCCCACCAGCAACCCGCTTCCGC...ACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp TGCACGTTGACCTTTGACCCGAGGGTGGACCTCGGTCCCTCCCACCCGAGGGCACGGCCTTGGCCTTCTTaGTGCCGAGGATGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: CTLTFDPRVDLGPSHPRARPWPS*CRGCRG
Trigger: ACCCCTACATCCTCGGCACCAAGAAGGCCAAGGCCG...TGCCCTCGGGTGGGAGGGACCGAGGTCCACCCTCGGGTCAAAGGTCAACGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp ATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCCGGGCTGGCTCTGTaGGGTACGGGATTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: MQEHGKRASAFLATGSTGPGLAL*GTGFPS
Trigger: AGAAGGAAATCCCGTACCCCACAGAGCCAGCCCGGG...CCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCCTGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp CTGCGGCCGCGGCGCTCCAGGTACTTCTCGAACAGGTTCTGCTCCGGGCTCTTCCCCGGGCTGGCTCTGTaGGGTACGGGATTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LRPRRSRYFSNRFCSGLFPGLAL*GTGFPS
Trigger: AGAAGGAAATCCCGTACCCCACAGAGCCAGCCCGGG...GAAGAGCCCGGAGCAGAACCTGTTCGAGAAGTACCTGGAGCGCCGCGGCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CCA 90 bp GGGCCCGGGTGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATTGTCCACCGGGAGGCTaGCCAGGCCACACGACACAG +
Preference number: 4 (lower is better)
Translates to: GPGWGTWLLRWAPSLLIHCPPGG*PGHTTQ
Trigger: CTGTGTCGTGTGGCCTGGCCAGCCTCCCGGTGGACA...ATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCACCCGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp TGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCACGTCCACGCAGGGCTaGTGTCCACCGGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: WGTWLLRWAPSLLIHGPRTSTQG*CPPGGW
Trigger: CCAGCCTCCCGGTGGACACCAGCCCTGCGTGGACGT...GCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCACCTGATGCAGGAGCATaGGAAGCGGGCTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: DRGWGCAQCGRSTGHVHAPDAGA*EAGFSL
Trigger: AAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGG...TGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp AAGCCCTGCCCGGGCTGGCTCTGTGGGGTACGGGATTTCCTTCTCGGGGAGCGGCCTGATGCAGGAGCATaGGAAGCGGGCTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: KPCPGWLCGVRDFLLGERPDAGA*EAGFSL
Trigger: AAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGG...CCGCTCCCCGAGAAGGAAATCCCGTACCCCACAGAGCCAGCCCGGGCAGGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CCA 90 bp GGGCCCGGGTGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATTGGCCACCCCACTGGTaGGACTGGCCCCACCTTCCT +
Preference number: 4 (lower is better)
Translates to: GPGWGTWLLRWAPSLLIHWPPHW*DWPHLP
Trigger: AGGAAGGTGGGGCCAGTCCCACCAGTGGGGTGGCCA...ATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCACCCGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp TCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCGATGAGGATCTGCTGTaGGGCAGGGATGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: SSYMGHALACTHALARLLDEDLL*GRDGDE
Trigger: CTCATCGCCATCCCTGCCCCACAGCAGATCCTCATC...GAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395842.3
3UTR CAA 72 bp TTGCTGTTCTCCACGCGCATGATGGCCAGCGGCTCCTaGAAGGGCTGCGGAAGCGGGTTGCTGGTGGGGATC +
Preference number: 4 (lower is better)
Translates to: LLFSTRMMASGS*KGCGSGLLVGI
Trigger: GATCCCCACCAGCAACCCGCTTCCGCAGCCCTTCAAGGAGCCGCTGGCCATCATGCGCGTGGAGAACAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR TCA 90 bp GCGACAAGGAGAAAGTGCACGTTGACCTTTGACCCGAGGGTGGACCTCGGTCCCGCGCCTGGTCGCGCGTaGAGTTGTGCGGGGTGTAAC +
Preference number: 4 (lower is better)
Translates to: ATRRKCTLTFDPRVDLGPAPGRA*SCAGCN
Trigger: GTTACACCCCGCACAACTTCACGCGCGACCAGGCGC...GGGACCGAGGTCCACCCTCGGGTCAAAGGTCAACGTGCACTTTCTCCTTGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR TCA 90 bp CGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGGTGCACGTTGACCTTTaGCCCGAGGGTGGACCTCGG +
Preference number: 4 (lower is better)
Translates to: RGYCVGPLHSSYMGHALAVHVDL*PEGGPR
Trigger: CCGAGGTCCACCCTCGGGTCAAAGGTCAACGTGCAC...CGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp GGGTGGGACCAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCGTAAATGGGTTCCTCTaGGAAGTTCTTGGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: GWDQPGAGRGSHRKPCGLVNGFL*EVLGED
Trigger: GTCTTCACCAAGAACTTCGCAGAGGAACCCATTTAC...GAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTGGTCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp GGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCCAGTTGTCGATCTCCTaGAGCAGGAAGTTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: GAWEAGFSLPGHRLHWATQLSIS*SRKLSS
Trigger: CGAGCTCAACTTCCTGCTGCAGGAGATCGACAACTG...GGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp ATGGCCAGGATGTTGATGTCGCAGAACTGCGAGCGGCGCCACTGCCGGCGCGTCCCCTTGGACTGGATCTaGTTCTCGATCTTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: MARMLMSQNCERRHCRRVPLDWI*FSILGA
Trigger: CGCGCCCAAGATCGAGAAGCAGATCCAGTCCAAGGG...GACGCGCCGGCAGTGGCGCCGCTCGCAGTTCTGCGACATCAACATCCTGGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR GCA 90 bp ACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCTAGCAGGATCAGCACGTaGCGCGCCAGGTACAGCTTG +
Preference number: 4 (lower is better)
Translates to: THGWAPDAGAWEAGFSLPSRIST*RARYSL
Trigger: CAAGCTGTACCTGGCGCGGCACGTGCTGATCCTGCT...AGGAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp GAAGTTGAGCTCGGAGGTGAGGCGCGTGGAGGCCAGGAACTCCCAGCCCAGCGCGGTCGCGGTTCTCGTTaGAGAACATGGCCAGGATGT +
Preference number: 4 (lower is better)
Translates to: EVELGGEARGGQELPAQRGRGSR*RTWPGC
Trigger: ACATCCTGGCCATGTTCTGCAACGAGAACCGCGACC...GCGCTGGGCTGGGAGTTCCTGGCCTCCACGCGCCTCACCTCCGAGCTCAACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR GCA 90 bp TCGTTGCAGAACATGGCCAGGATGTTGATGTCGCAGAACTGCGAGCGGCGCCACCCGTGGCCGTCTTCCTaGGCGCGGGCTTCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLQNMARMLMSQNCERRHPWPSS*ARASAS
Trigger: AGAAGCCGAAGCCCGCGCGCAGGAAGACGGCCACGG...GTGGCGCCGCTCGCAGTTCTGCGACATCAACATCCTGGCCATGTTCTGCAACGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR GCA 90 bp TTGTCGTACATGAGGTCGCTCTCGTTGGTGATGAAGTCCAGCCGGTTGAGCGACGCCAGTGCCTGGCGATaGCGTCCGGGCGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: LSYMRSLSLVMKSSRLSDASAWR*RPGGFP
Trigger: GGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGC...GTCGCTCAACCGGCTGGACTTCATCACCAACGAGAGCGACCTCATGTACGACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CCA 90 bp GGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTGAGCGACTTGATGTaGTCGCGGTTCTCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GAWEAGFSLPGHRLHWATLSDLM*SRFSLQ
Trigger: CTGCAACGAGAACCGCGACCACATCAAGTCGCTCAA...GGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCACCCCAGTTGAGCGACTTGATGTaGTCGCGGTTCTCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GLQPSWPPAPLGHLSPPQLSDLM*SRFSLQ
Trigger: CTGCAACGAGAACCGCGACCACATCAAGTCGCTCAA...CTGGGGTGGGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GCGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGACGTCCAGGGAGAAGTaGCGCGCGTGCTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: ALGPFTPHTWATRWRALTTSREK*RACFLS
Trigger: TGACAAGAAGCACGCGCGCCACTTCTCCCTGGACGT...CGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CCACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCACGTCCAGGGAGAAGTaGCGCGCGTGCTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: PPTAGHLMQEHGKRASAFTSREK*RACFLS
Trigger: TGACAAGAAGCACGCGCGCCACTTCTCCCTGGACGT...GAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp GGGCCCGGGTGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATGCAGCAGCGGGTGTGTaGCGTTTCGGCTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: GPGWGTWLLRWAPSLLIHAAAGV*RFGSGW
Trigger: CCATCCTGAGCCGAAACGCCACACACCCGCTGCTGC...ATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCACCCGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGGTGTACGTGGTTATTGCGTTaGGCCCCTTCACTCCTCATA +
Preference number: 4 (lower is better)
Translates to: GDARSAGEAQATSTQGWCTWLLR*APSLLI
Trigger: TATGAGGAGTGAAGGGGCCCAACGCAATAACCACGT...ACACCAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp GACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCACAGTTGTCGATCTCCTaGAGCAGGAAGTTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: DRGWGCAQCGRSTGHVHAQLSIS*SRKLSS
Trigger: CGAGCTCAACTTCCTGCTGCAGGAGATCGACAACTG...TGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp GGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGGTGTTTGATGCCCACCTTGTaGAGCTTGTCGAAGATGAAG +
Preference number: 4 (lower is better)
Translates to: GDARSAGEAQATSTQGWCLMPTL*SLSKMK
Trigger: CTTCATCTTCGACAAGCTGCACAAGGTGGGCATCAA...ACACCAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR GCA 90 bp TGCACGTTGACCTTTGACCCGAGGGTGGACCTCGGTCCCTCCCACCCGAGGGCAGGTCGCGGTTCTCGTTaGAGAACATGGCCAGGATGT +
Preference number: 4 (lower is better)
Translates to: CTLTFDPRVDLGPSHPRAGRGSR*RTWPGC
Trigger: ACATCCTGGCCATGTTCTGCAACGAGAACCGCGACC...TGCCCTCGGGTGGGAGGGACCGAGGTCCACCCTCGGGTCAAAGGTCAACGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCCGTTCTGCTTCTGCGTaGCGTAGTAGGTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: RWAPSLLIHGPRAGVHSRRSASA*RSRCTG
Trigger: ACCTGTGCACCTACTACGCCACGCAGAAGCAGAACG...GCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp TGGGCTGGGGGAGTTGGGCTGTCTCGCCACAGCCCGGGGCCAGGACGAAACGGACGGAAGATGAAGAGGTaGATGAGGTTGACGAGGATG +
Preference number: 4 (lower is better)
Translates to: WAGGVGLSRHSPGPGRNGRKMKR*MRLTRM
Trigger: CATCCTCGTCAACCTCATCCACCTCTTCATCTTCCG...TCCGTTTCGTCCTGGCCCCGGGCTGTGGCGAGACAGCCCAACTCCCCCAGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCATGACATGGTCTCCATaGCTGAGGTATTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GQRLGMRAVRAKHRPRPRMTWSP*LRYLGW
Trigger: CCACCCCAAATACCTCAGCCATGGAGACCATGTCAT...GCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR CAA 72 bp GAGCGGCGCCACTGCCGGCGCGTCTTGATGCCCACCTaGTGCAGCTTGTCGAAGATGAAGTTGCTCTTGCGG +
Preference number: 4 (lower is better)
Translates to: ERRHCRRVLMPT*CSLSKMKLLLR
Trigger: CCGCAAGAGCAACTTCATCTTCGACAAGCTGCACAAGGTGGGCATCAAGACGCGCCGGCAGTGGCGCCGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CAA 72 bp TCGCAGAACTGCGAGCGGCGCCACTGCCGGCGCGTCTaGATGCCCACCTTGTGCAGCTTGTCGAAGATGAAG +
Preference number: 4 (lower is better)
Translates to: SQNCERRHCRRV*MPTLCSLSKMK
Trigger: CTTCATCTTCGACAAGCTGCACAAGGTGGGCATCAAGACGCGCCGGCAGTGGCGCCGCTCGCAGTTCTGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CAA 72 bp TGGTCGCGGTTCTCGTTGCAGAACATGGCCAGGATGTaGATGTCGCAGAACTGCGAGCGGCGCCACTGCCGG +
Preference number: 4 (lower is better)
Translates to: WSRFSLQNMARM*MSQNCERRHCR
Trigger: CCGGCAGTGGCGCCGCTCGCAGTTCTGCGACATCAACATCCTGGCCATGTTCTGCAACGAGAACCGCGACCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR TCA 90 bp TCGTACATGAGGTCGCTCTCGTTGGTGATGAAGTCCAGCCGGTTGAGCGACTTGGCGCGGGCACGTACATaGTGGCGGCGAAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SYMRSLSLVMKSSRLSDLARART*WRRRPA
Trigger: TGCTGGCCTTCGCCGCCATCATGTACGTGCCCGCGC...CAAGTCGCTCAACCGGCTGGACTTCATCACCAACGAGAGCGACCTCATGTACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR GCA 90 bp CTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCTTCTCGAACAGGTTCTaGTCCGGGCTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LHSSYMGHALACTHALARFSNRF*SGLFSF
Trigger: GAAGGAGAAGAGCCCGGAGCAGAACCTGTTCGAGAA...GCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp CTGCGGCCGCGGCGCTCCAGGTACTTCTCGAACAGGTTCTGCTCCGGGCTCTTCTTCTCGAACAGGTTCTaGTCCGGGCTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LRPRRSRYFSNRFCSGLFFSNRF*SGLFSF
Trigger: GAAGGAGAAGAGCCCGGAGCAGAACCTGTTCGAGAA...GAAGAGCCCGGAGCAGAACCTGTTCGAGAAGTACCTGGAGCGCCGCGGCCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR GCA 90 bp CACGCTCACCTCTGCTCATGCCCGTTCACACACACACCATCCTGCTTTAAACCCGCTTGGCCAGGAAGTTaGTGCGGCCGCGGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: HAHLCSCPFTHTPSCFKPAWPGS*CGRGAP
Trigger: TGGAGCGCCGCGGCCGCAGCAACTTCCTGGCCAAGC...GGGTTTAAAGCAGGATGGTGTGTGTGTGAACGGGCATGAGCAGAGGTGAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp CCACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCGCGACAAGGAGAAAGTaGACGTTGACCTTTGACCCG +
Preference number: 4 (lower is better)
Translates to: PPTAGHLMQEHGKRASAFATRRK*TLTFDP
Trigger: CGGGTCAAAGGTCAACGTGCACTTTCTCCTTGTCGC...GAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp AGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAACACACACACCATCCTaGTTTAAACCCATCCTGTCT +
Preference number: 4 (lower is better)
Translates to: SAWRCRPGGFPCRARGGETHTPS*FKPILS
Trigger: AGACAGGATGGGTTTAAAGCAGGATGGTGTGTGTGT...TTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp TGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCACCACACCCTCTGTaGACACGCACACACGTGCAC +
Preference number: 4 (lower is better)
Translates to: WGTWLLRWAPSLLIHGPRAPHPL*TRTHVH
Trigger: GTGCACGTGTGTGCGTGTGCACAGAGGGTGTGGTGC...GCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp AGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGGTGTAACAGTAAATaGGTTCCTCTGCGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SAWRCRPGGFPCRARGGEGCNSK*VPLRSS
Trigger: AGAACTTCGCAGAGGAACCCATTTACTGTTACACCC...TTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GCGACAAGGAGAAAGTGCACGTTGACCTTTGACCCGAGGGTGGACCTCGGTCCCTGCACAGGTAGGAGATaGGCACGGCGCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ATRRKCTLTFDPRVDLGPCTGRR*ARRSAA
Trigger: TGCTGCTGAGCGCCGTGCCCATCTCCTACCTGTGCA...GGGACCGAGGTCCACCCTCGGGTCAAAGGTCAACGTGCACTTTCTCCTTGTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp TCCCTCCCACCCGAGGGCATCAGGTCCCTGCAGGGGGTGACCCCTGAGCATGTGATGACATGGTCTCCATaGCTGAGGTATTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SLPPEGIRSLQGVTPEHVMTWSP*LRYLGW
Trigger: CCACCCCAAATACCTCAGCCATGGAGACCATGTCAT...CACATGCTCAGGGGTCACCCCCTGCAGGGACCTGATGCCCTCGGGTGGGAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp CACGCTCACCTCTGCTCATGCCCGTTCACACACACACCATCCTGCTTTAAACCCCCCGCGATGATGCGCTaGAGTTGCACGGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: HAHLCSCPFTHTPSCFKPPAMMR*SCTDGS
Trigger: GCTCCCGTCCGTGCAACTGCAGCGCATCATCGCGGG...GGGTTTAAAGCAGGATGGTGTGTGTGTGAACGGGCATGAGCAGAGGTGAGCGTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp CATGCCCGTTCACACACACACCATCCTGCTTTAAACCCATCCTGTCTCCTGATGGCGTCGTGGTTGGACTaGGCCAGCGCCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HARSHTHHPALNPSCLLMASWLD*ASAASS
Trigger: GCTGCTGGCGGCGCTGGCGCAGTCCAACCACGACGC...CATCAGGAGACAGGATGGGTTTAAAGCAGGATGGTGTGTGTGTGAACGGGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp TGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCCCTTGGCCTTCTTGGTaGCGAGGATGTAGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: WGTWLLRWAPSLLIHGPRPWPSW*RGCRGA
Trigger: TGCACCCCTACATCCTCGGCACCAAGAAGGCCAAGG...GCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp AACTCCACAGTACTCACGACCGTTCTCGGCTCGTCGAAGGTGGCGATGAGGATAGACAGAGGTTGGGGATaGGCGCAGTGCGGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: NSTVLTTVLGSSKVAMRIDRGWG*AQCGRS
Trigger: GCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTC...TATCCTCATCGCCACCTTCGACGAGCCGAGAACGGTCGTGAGTACTGTGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR GCA 90 bp ACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCTGCGACAAGGAGAAAGTaGACGTTGACCTTTGACCCG +
Preference number: 4 (lower is better)
Translates to: THGWAPDAGAWEAGFSLPATRRK*TLTFDP
Trigger: CGGGTCAAAGGTCAACGTGCACTTTCTCCTTGTCGC...AGGAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CCACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCGGAAGATGAAGAGGTaGATGAGGTTGACGAGGATG +
Preference number: 4 (lower is better)
Translates to: PPTAGHLMQEHGKRASAFRKMKR*MRLTRM
Trigger: CATCCTCGTCAACCTCATCCACCTCTTCATCTTCCG...GAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp ACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCTGAAGCGGGTTGCTGGTaGGGATCCACTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: THGWAPDAGAWEAGFSLPEAGCW*GSTSSS
Trigger: AGAAGATGAAGTGGATCCCCACCAGCAACCCGCTTC...AGGAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CCA 90 bp CTCCAGGTACTTCTCGAACAGGTTCTGCTCCGGGCTCTTCTCCTTCTCCGCGTTGCAGCAGCGGGTGTGTaGCGTTTCGGCTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: LQVLLEQVLLRALLLLRVAAAGV*RFGSGW
Trigger: CCATCCTGAGCCGAAACGCCACACACCCGCTGCTGC...AACGCGGAGAAGGAGAAGAGCCCGGAGCAGAACCTGTTCGAGAAGTACCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CCA 90 bp CACGCTCACCTCTGCTCATGCCCGTTCACACACACACCATCCTGCTTTAAACCCACATGGGCCACGCGCTaGCGTGCACTCACGCACTCG +
Preference number: 4 (lower is better)
Translates to: HAHLCSCPFTHTPSCFKPTWATR*RALTHS
Trigger: CGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGT...GGGTTTAAAGCAGGATGGTGTGTGTGTGAACGGGCATGAGCAGAGGTGAGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GCGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGACGTGGTTATTGCGTTaGGCCCCTTCACTCCTCATA +
Preference number: 4 (lower is better)
Translates to: ALGPFTPHTWATRWRALTTWLLR*APSLLI
Trigger: TATGAGGAGTGAAGGGGCCCAACGCAATAACCACGT...CGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR TCA 90 bp ACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCTGCAGCTTGTCGAAGATaGAGTTGCTCTTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: THGWAPDAGAWEAGFSLPAACRR*SCSCGR
Trigger: TCTTCCGCAAGAGCAACTTCATCTTCGACAAGCTGC...AGGAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR TCA 90 bp ACGCTCACCTCTGCTCATGCCCGTTCACACACACACCATCCTGCTTTAAACCCATTCGGCTCAGGATGGTaGGGGGCTCCGCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: TLTSAHARSHTHHPALNPFGSGW*GAPPCP
Trigger: TGGGCAAGGCGGAGCCCCTCACCATCCTGAGCCGAA...TGGGTTTAAAGCAGGATGGTGTGTGTGTGAACGGGCATGAGCAGAGGTGAGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp TCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCGTAAATGGGTTCCTCTaGGAAGTTCTTGGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: SSYMGHALACTHALARLLVNGFL*EVLGED
Trigger: GTCTTCACCAAGAACTTCGCAGAGGAACCCATTTAC...GAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp CGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTTCTCGAACAGGTTCTaGTCCGGGCTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RGYCVGPLHSSYMGHALAFSNRF*SGLFSF
Trigger: GAAGGAGAAGAGCCCGGAGCAGAACCTGTTCGAGAA...CGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp AGCAGGAAGTTGAGCTCGGAGGTGAGGCGCGTGGAGGCCAGGAACTCCCAGCCCTTGATGCCCACCTTGTaGAGCTTGTCGAAGATGAAG +
Preference number: 4 (lower is better)
Translates to: SRKLSSEVRRVEARNSQPLMPTL*SLSKMK
Trigger: CTTCATCTTCGACAAGCTGCACAAGGTGGGCATCAA...GGGCTGGGAGTTCCTGGCCTCCACGCGCCTCACCTCCGAGCTCAACTTCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR GCA 90 bp ACGCTCACCTCTGCTCATGCCCGTTCACACACACACCATCCTGCTTTAAACCCAAGCGCCGCCAGCAGCTaGCGGACCACGTTGTCGTAC +
Preference number: 4 (lower is better)
Translates to: TLTSAHARSHTHHPALNPSAASS*RTTLSY
Trigger: GTACGACAACGTGGTCCGGCAGCTGCTGGCGGCGCT...TGGGTTTAAAGCAGGATGGTGTGTGTGTGAACGGGCATGAGCAGAGGTGAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp TCGTACATGAGGTCGCTCTCGTTGGTGATGAAGTCCAGCCGGTTGAGCGACTTGGGCTCCTTGAAGGGCTaGGGAAGCGGGTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SYMRSLSLVMKSSRLSDLGSLKG*GSGLLV
Trigger: CACCAGCAACCCGCTTCCGCAGCCCTTCAAGGAGCC...CAAGTCGCTCAACCGGCTGGACTTCATCACCAACGAGAGCGACCTCATGTACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR GCA 90 bp TCGTACATGAGGTCGCTCTCGTTGGTGATGAAGTCCAGCCGGTTGAGCGACTTGCGGCGGCCTGGACGGTaGCATCCCTCAAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: SYMRSLSLVMKSSRLSDLRRPGR*HPSKLH
Trigger: GTGGAGTTTTGAGGGATGGCACCGTCCAGGCCGCCG...CAAGTCGCTCAACCGGCTGGACTTCATCACCAACGAGAGCGACCTCATGTACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CCA 90 bp ACGCTCACCTCTGCTCATGCCCGTTCACACACACACCATCCTGCTTTAAACCCACCTTTGACCCGAGGGTaGACCTCGGTCCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: TLTSAHARSHTHHPALNPPLTRG*TSVPPT
Trigger: GGTGGGAGGGACCGAGGTCCACCCTCGGGTCAAAGG...TGGGTTTAAAGCAGGATGGTGTGTGTGTGAACGGGCATGAGCAGAGGTGAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp AGCTGCCGGACCACGTTGTCGTACATGAGGTCGCTCTCGTTGGTGATGAAGTCCGATAGCGTGTTGATGTaGAGCAGCGGGTGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: SCRTTLSYMRSLSLVMKSDSVLM*SSGCVA
Trigger: CGCCACACACCCGCTGCTGCACATCAACACGCTATC...GGACTTCATCACCAACGAGAGCGACCTCATGTACGACAACGTGGTCCGGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR GCA 90 bp TGCACGTTGACCTTTGACCCGAGGGTGGACCTCGGTCCCTCCCACCCGAGGGCAACACACACACCATCCTaGTTTAAACCCATCCTGTCT +
Preference number: 4 (lower is better)
Translates to: CTLTFDPRVDLGPSHPRATHTPS*FKPILS
Trigger: AGACAGGATGGGTTTAAAGCAGGATGGTGTGTGTGT...TGCCCTCGGGTGGGAGGGACCGAGGTCCACCCTCGGGTCAAAGGTCAACGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp CATGCCCGTTCACACACACACCATCCTGCTTTAAACCCATCCTGTCTCCTGATGCGGCGGCCTGGACGGTaGCATCCCTCAAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: HARSHTHHPALNPSCLLMRRPGR*HPSKLH
Trigger: GTGGAGTTTTGAGGGATGGCACCGTCCAGGCCGCCG...CATCAGGAGACAGGATGGGTTTAAAGCAGGATGGTGTGTGTGTGAACGGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CACGCTCACCTCTGCTCATGCCCGTTCACACACACACCATCCTGCTTTAAACCCCCTGATGCAGGAGCATaGGAAGCGGGCTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: HAHLCSCPFTHTPSCFKPPDAGA*EAGFSL
Trigger: AAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGG...GGGTTTAAAGCAGGATGGTGTGTGTGTGAACGGGCATGAGCAGAGGTGAGCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
3UTR CAA 72 bp CTCTCGTTGGTGATGAAGTCCAGCCGGTTGAGCGACTaGATGTGGTCGCGGTTCTCGTTGCAGAACATGGCC +
Preference number: 4 (lower is better)
Translates to: LSLVMKSSRLSD*MWSRFSLQNMA
Trigger: GGCCATGTTCTGCAACGAGAACCGCGACCACATCAAGTCGCTCAACCGGCTGGACTTCATCACCAACGAGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CAA 72 bp ATGAGGTCGCTCTCGTTGGTGATGAAGTCCAGCCGGTaGAGCGACTTGATGTGGTCGCGGTTCTCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: MRSLSLVMKSSR*SDLMWSRFSLQ
Trigger: CTGCAACGAGAACCGCGACCACATCAAGTCGCTCAACCGGCTGGACTTCATCACCAACGAGAGCGACCTCAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CAA 72 bp TGCCGGACCACGTTGTCGTACATGAGGTCGCTCTCGTaGGTGATGAAGTCCAGCCGGTTGAGCGACTTGATG +
Preference number: 4 (lower is better)
Translates to: CRTTLSYMRSLS*VMKSSRLSDLM
Trigger: CATCAAGTCGCTCAACCGGCTGGACTTCATCACCAACGAGAGCGACCTCATGTACGACAACGTGGTCCGGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR GCA 90 bp AGCGACTTGATGTGGTCGCGGTTCTCGTTGCAGAACATGGCCAGGATGTTGATGCCTTGGCCTTCTTGGTaGCGAGGATGTAGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: SDLMWSRFSLQNMARMLMPWPSW*RGCRGA
Trigger: TGCACCCCTACATCCTCGGCACCAAGAAGGCCAAGG...CATCAACATCCTGGCCATGTTCTGCAACGAGAACCGCGACCACATCAAGTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CCA 90 bp GACCACGTTGTCGTACATGAGGTCGCTCTCGTTGGTGATGAAGTCCAGCCGGTTCGTTCTGCTTCTGCGTaGCGTAGTAGGTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: DHVVVHEVALVGDEVQPVRSASA*RSRCTG
Trigger: ACCTGTGCACCTACTACGCCACGCAGAAGCAGAACG...AACCGGCTGGACTTCATCACCAACGAGAGCGACCTCATGTACGACAACGTGGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CCA 90 bp AGCTGCCGGACCACGTTGTCGTACATGAGGTCGCTCTCGTTGGTGATGAAGTCCGAAGCGGGTTGCTGGTaGGGATCCACTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SCRTTLSYMRSLSLVMKSEAGCW*GSTSSS
Trigger: AGAAGATGAAGTGGATCCCCACCAGCAACCCGCTTC...GGACTTCATCACCAACGAGAGCGACCTCATGTACGACAACGTGGTCCGGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CAA 72 bp CACTGCCGGCGCGTCTTGATGCCCACCTTGTGCAGCTaGTCGAAGATGAAGTTGCTCTTGCGGAAGATGAAG +
Preference number: 4 (lower is better)
Translates to: HCRRVLMPTLCS*SKMKLLLRKMK
Trigger: CTTCATCTTCCGCAAGAGCAACTTCATCTTCGACAAGCTGCACAAGGTGGGCATCAAGACGCGCCGGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
3UTR CAA 72 bp AGCCGGTTGAGCGACTTGATGTGGTCGCGGTTCTCGTaGCAGAACATGGCCAGGATGTTGATGTCGCAGAAC +
Preference number: 4 (lower is better)
Translates to: SRLSDLMWSRFS*QNMARMLMSQN
Trigger: GTTCTGCGACATCAACATCCTGGCCATGTTCTGCAACGAGAACCGCGACCACATCAAGTCGCTCAACCGGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR TCA 90 bp ACGCTCACCTCTGCTCATGCCCGTTCACACACACACCATCCTGCTTTAAACCCAACATGGCCAGGATGTTaGTGTCGCAGAACTGCGAGC +
Preference number: 4 (lower is better)
Translates to: TLTSAHARSHTHHPALNPTWPGC*CRRTAS
Trigger: GCTCGCAGTTCTGCGACATCAACATCCTGGCCATGT...TGGGTTTAAAGCAGGATGGTGTGTGTGTGAACGGGCATGAGCAGAGGTGAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CACACACCATCCTGCTTTAAACCCATCCTGTCTCCTGATGATAAATATGCTTGTGAGCATGTGACCCCATaGGCGTGGCCACCCCACTGG +
Preference number: 4 (lower is better)
Translates to: HTPSCFKPILSPDDKYACEHVTP*AWPPHW
Trigger: CCAGTGGGGTGGCCACGCCCATGGGGTCACATGCTC...ACAAGCATATTTATCATCAGGAGACAGGATGGGTTTAAAGCAGGATGGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp TCCTGTCTCCTGATGATAAATATGCTTGTTCGGTACAGCAGTCTTAGTAAAATAGCACGGACGGGAGCTTaGAGCTCACGCGCACCGCGG +
Preference number: 4 (lower is better)
Translates to: SCLLMINMLVRYSSLSKIARTGA*SSRAPR
Trigger: CCGCGGTGCGCGTGAGCTGCAAGCTCCCGTCCGTGC...TATTTTACTAAGACTGCTGTACCGAACAAGCATATTTATCATCAGGAGACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR GCA 90 bp CACACACCATCCTGCTTTAAACCCATCCTGTCTCCTGATGATAAATATGCTTGTGCTGCGGAAGCGGGTTaGTGGTGGGGATCCACTTCA +
Preference number: 4 (lower is better)
Translates to: HTPSCFKPILSPDDKYACAAEAG*WWGSTS
Trigger: TGAAGTGGATCCCCACCAGCAACCCGCTTCCGCAGC...ACAAGCATATTTATCATCAGGAGACAGGATGGGTTTAAAGCAGGATGGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp CACACACCATCCTGCTTTAAACCCATCCTGTCTCCTGATGATAAATATGCTTGTCCCGGGCTGGCTCTGTaGGGTACGGGATTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: HTPSCFKPILSPDDKYACPGLAL*GTGFPS
Trigger: AGAAGGAAATCCCGTACCCCACAGAGCCAGCCCGGG...ACAAGCATATTTATCATCAGGAGACAGGATGGGTTTAAAGCAGGATGGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR TCA 90 bp TCCTGTCTCCTGATGATAAATATGCTTGTTCGGTACAGCAGTCTTAGTAAAATAGGAGAAAGTGCACGTTaGCCTTTGACCCGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SCLLMINMLVRYSSLSKIGESAR*PLTRGW
Trigger: CCACCCTCGGGTCAAAGGTCAACGTGCACTTTCTCC...TATTTTACTAAGACTGCTGTACCGAACAAGCATATTTATCATCAGGAGACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CCA 90 bp GTCGAAGATGAAGTTGCTCTTGCGGAAGATGAAGAGGTGGATGAGGTTGACGAGGGGTGTAACAGTAAATaGGTTCCTTTATGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: VEDEVALAEDEEVDEVDEGCNSK*VPLCFV
Trigger: GACAAAACATAAAGGAACCCATTTACTGTTACACCC...CTCGTCAACCTCATCCACCTCTTCATCTTCCGCAAGAGCAACTTCATCTTCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR GCA 90 bp TCCTGTCTCCTGATGATAAATATGCTTGTTCGGTACAGCAGTCTTAGTAAAATATTGATGCCCACCTTGTaGAGCTTGTCGAAGATGAAG +
Preference number: 4 (lower is better)
Translates to: SCLLMINMLVRYSSLSKILMPTL*SLSKMK
Trigger: CTTCATCTTCGACAAGCTGCACAAGGTGGGCATCAA...TATTTTACTAAGACTGCTGTACCGAACAAGCATATTTATCATCAGGAGACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp CAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCAGCCGCGGCTTCTTGCGCGGCCGCTaGACCACGGGCGGCTCGGCG +
Preference number: 5 (lower is better)
Translates to: QPGAGRGSHRKPCGLSRGFLRGR*TTGGSA
Trigger: CGCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGAA...GCCGCGGCTGAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp CCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCTTCTTGCGCGGCCGCTaGACCACGGGCGGCTCGGCG +
Preference number: 5 (lower is better)
Translates to: PGDAVRAGSPVEHVGAKAFLRGR*TTGGSA
Trigger: CGCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGAA...GGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp GGGTGGGACCAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCATCTGCTTCTCGATCTaGGGCGCGCGGCCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: GWDQPGAGRGSHRKPCGLICFSI*GARPSA
Trigger: GGCCGAGGGCCGCGCGCCCAAGATCGAGAAGCAGAT...GAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTGGTCCCACCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp CTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCCATCTGCTTCTCGATCTaGGGCGCGCGGCCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: LAMPSGRVPLSSTWGRRPICFSI*GARPSA
Trigger: GGCCGAGGGCCGCGCGCCCAAGATCGAGAAGCAGAT...GGGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp CACCCCAGCCAGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGGTGAGGGGCTCCGCCTaGCCCAGGCTGGCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: HPSQCLAMPSGRVPLSSTVRGSA*PRLAGV
Trigger: GACACCAGCCAGCCTGGGCAAGGCGGAGCCCCTCAC...CGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACTGGCTGGGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS GCA 90 bp TTCAGCTGCAGAAGCAGCGCGGCCAGCGCGCCCGCCTTGTCGTCCTaGGCGCCCGGCAGGATCAGCTCCCGCAGCTTCTCTCCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: FSCRSSAASAPALSS*APGRISSRSFSPAS
Trigger: GCTGGCGGGAGAGAAGCTGCGGGAGCTGATCCTGCCGGGCGCGCAGGACGACAAGGCGGGCGCGCTGGCCGCGCTGCTTCTGCAGCTGAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp GATGCGCTGCAGTTGCACGGACGGGAGCTTGCAGCTCACGCGCACCGCGGGCCCTGCACGGACGGGAGCTaGCAGCTCACGCGCACCGCG +
Preference number: 5 (lower is better)
Translates to: DALQLHGRELAAHAHRGPCTDGS*QLTRTA
Trigger: CGCGGTGCGCGTGAGCTGCAAGCTCCCGTCCGTGCA...GGGCCCGCGGTGCGCGTGAGCTGCAAGCTCCCGTCCGTGCAACTGCAGCGCATC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CAA 90 bp CTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCACGGGGTGGCGTCGTGGTaGGACTGCGCCAGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: LIHGPRAGVHSRTRPPAHGVASW*DCASAA
Trigger: GGCGGCGCTGGCGCAGTCCAACCACGACGCCACCCC...GTGAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp TCCCTCCCACCCGAGGGCATCAGGTCCCTGCAGGGGGTGACCCCTGAGCATGTGGGGGTGGCGTCGTGGTaGGACTGCGCCAGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: SLPPEGIRSLQGVTPEHVGVASW*DCASAA
Trigger: GGCGGCGCTGGCGCAGTCCAACCACGACGCCACCCC...CACATGCTCAGGGGTCACCCCCTGCAGGGACCTGATGCCCTCGGGTGGGAGGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp GGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCTTCTTGCGCGGCCGCTaGACCACGGGCGGCTCGGCG +
Preference number: 5 (lower is better)
Translates to: GQRLGMRAVRAKHRPRPRFLRGR*TTGGSA
Trigger: CGCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGAA...GCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp GGGTGGGACCAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCGGCTGCGGAAGCGGGTaGCTGGTGGGGATCCACTTC +
Preference number: 5 (lower is better)
Translates to: GWDQPGAGRGSHRKPCGLGCGSG*LVGIHF
Trigger: GAAGTGGATCCCCACCAGCAACCCGCTTCCGCAGCC...GAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTGGTCCCACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp GGGCGAAGGCCCCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGATGGCCAGCGGCTCCTaGAAGGGCTGCGGAAGCGGG +
Preference number: 5 (lower is better)
Translates to: GRRPQACGQRLGMRAVRAMASGS*KGCGSG
Trigger: CCCGCTTCCGCAGCCCTTCAAGGAGCCGCTGGCCAT...CGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp GGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGGGCACCGCCTCGGCCTaGGCCTTCTTGGTGCCGAGG +
Preference number: 5 (lower is better)
Translates to: GWGCAQCGRSTGHVHAGLGTASA*AFLVPR
Trigger: CCTCGGCACCAAGAAGGCCAAGGCCGAGGCGGTGCC...CAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp AGTGCCTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGGAGCGGAGCATCTTaGATGGGCGCCGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SAWRCRPGGFPCRARGGEGSGAS*MGAGAR
Trigger: CCTGGCCCCGGCGCCCATCAAAGATGCTCCGCTCCC...TTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAGGCACT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp GGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGATCTGCTTCTCGATCTaGGGCGCGCGGCCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: GWGCAQCGRSTGHVHAGLICFSI*GARPSA
Trigger: GGCCGAGGGCCGCGCGCCCAAGATCGAGAAGCAGAT...CAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp GGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCTGCACGGACGGGAGCTaGCAGCTCACGCGCACCGCG +
Preference number: 5 (lower is better)
Translates to: GQRLGMRAVRAKHRPRPRCTDGS*QLTRTA
Trigger: CGCGGTGCGCGTGAGCTGCAAGCTCCCGTCCGTGCA...GCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp GGTGGGCGGAGCGGTCCAGCAGCGGCGCGATCAGCGTGTCCGTGGCCGTCTTCCCACTGCCGGCGCGTCTaGATGCCCACCTTGTGCAGC +
Preference number: 5 (lower is better)
Translates to: GGRSGPAAARSACPWPSSHCRRV*MPTLCS
Trigger: GCTGCACAAGGTGGGCATCAAGACGCGCCGGCAGTG...GGAAGACGGCCACGGACACGCTGATCGCGCCGCTGCTGGACCGCTCCGCCCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CAA 90 bp GGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGGTGTATGGCCAGCGGCTCCTaGAAGGGCTGCGGAAGCGGG +
Preference number: 5 (lower is better)
Translates to: GDARSAGEAQATSTQGWCMASGS*KGCGSG
Trigger: CCCGCTTCCGCAGCCCTTCAAGGAGCCGCTGGCCAT...ACACCAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp GGGCGAAGGCCCCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGTCCTGCAGCAGGAAGTaGAGCTCGGAGGTGAGGCGC +
Preference number: 5 (lower is better)
Translates to: GRRPQACGQRLGMRAVRASCSRK*SSEVRR
Trigger: GCGCCTCACCTCCGAGCTCAACTTCCTGCTGCAGGA...CGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp TGCTCAAACAGCGACGGCCACAGGCTGGCGTCCACGCCGGGCAGCGCGTCCCGCGTGATGCCCGGGCCCTaGGACTGGATCTGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: CSNSDGHRLASTPGSASRVMPGP*DWICFS
Trigger: CGAGAAGCAGATCCAGTCCAAGGGCCCGGGCATCAC...GCGGGACGCGCTGCCCGGCGTGGACGCCAGCCTGTGGCCGTCGCTGTTTGAGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CAA 90 bp GACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCATGCACGGACGGGAGCTaGCAGCTCACGCGCACCGCG +
Preference number: 5 (lower is better)
Translates to: DRGWGCAQCGRSTGHVHACTDGS*QLTRTA
Trigger: CGCGGTGCGCGTGAGCTGCAAGCTCCCGTCCGTGCA...TGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp CAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCAGCCGCGGCTGGTCGCGGTTCTCGTaGCAGAACATGGCCAGGATG +
Preference number: 5 (lower is better)
Translates to: QPGAGRGSHRKPCGLSRGWSRFS*QNMARM
Trigger: CATCCTGGCCATGTTCTGCAACGAGAACCGCGACCA...GCCGCGGCTGAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp CTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCCAGCCGGTTGAGCGACTaGATGTGGTCGCGGTTCTCG +
Preference number: 5 (lower is better)
Translates to: LAMPSGRVPLSSTWGRRPSRLSD*MWSRFS
Trigger: CGAGAACCGCGACCACATCAAGTCGCTCAACCGGCT...GGGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp GGGTGGGACCAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCAGCTGCCGGACCACGTaGTCGTACATGAGGTCGCTC +
Preference number: 5 (lower is better)
Translates to: GWDQPGAGRGSHRKPCGLSCRTT*SYMRSL
Trigger: GAGCGACCTCATGTACGACAACGTGGTCCGGCAGCT...GAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTGGTCCCACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp CTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCACGGCACCGCCTCGGCCTaGGCCTTCTTGGTGCCGAGG +
Preference number: 5 (lower is better)
Translates to: LIHGPRAGVHSRTRPPAHGTASA*AFLVPR
Trigger: CCTCGGCACCAAGAAGGCCAAGGCCGAGGCGGTGCC...GTGAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp TCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCGGGAGCGGAGCATCTTaGATGGGCGCCGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SSYMGHALACTHALARLLGSGAS*MGAGAR
Trigger: CCTGGCCCCGGCGCCCATCAAAGATGCTCCGCTCCC...GAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp CCTGCCCGGGCTGGCTCTGTGGGGTACGGGATTTCCTTCTCGGGGAGCGGAGCAGTGAGGGGCTCCGCCTaGCCCAGGCTGGCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: PARAGSVGYGISFSGSGAVRGSA*PRLAGV
Trigger: GACACCAGCCAGCCTGGGCAAGGCGGAGCCCCTCAC...TGCTCCGCTCCCCGAGAAGGAAATCCCGTACCCCACAGAGCCAGCCCGGGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CAA 90 bp CCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCGCATGCGGACAGAGGTaGGGGATGCGCGCAGTGCGG +
Preference number: 5 (lower is better)
Translates to: PGMRTEVGDARSAGEAQAACGQR*GMRAVR
Trigger: CCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGC...GGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp CTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTGCTCACGCTGGGCTGGGGGAGTaGGGCTGTCTCGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: LIHGPRAGVHSRTRPPAHAGLGE*GCLATA
Trigger: GGCTGTGGCGAGACAGCCCAACTCCCCCAGCCCAGC...GTGAGCAGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS GCA 90 bp GGGCCCCCGTCCTCCTCCTCCCGGGCCTCGTACAGCGTGTTGATGTaGAGCAGCGGGTGTGTGGCGTTTCGGCTCAGGATGGTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: GPPSSSSRASYSVLM*SSGCVAFRLRMVRG
Trigger: GCCCCTCACCATCCTGAGCCGAAACGCCACACACCCGCTGCTGCACATCAACACGCTGTACGAGGCCCGGGAGGAGGAGGACGGGGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395842.3
CDS-3UTR CAA 90 bp TGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGGTGGTGATGCCCGGGCCCTaGGACTGGATCTGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: WGCAQCGRSTGHVHAGLVVMPGP*DWICFS
Trigger: CGAGAAGCAGATCCAGTCCAAGGGCCCGGGCATCAC...CACCAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp GCCGGGGCCCGGGTCGCCCCCTCCGCCCTTGTAGTGGTGGGCGGAGCGGTCCAGCCCACCTTGTGCAGCTaGTCGAAGATGAAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: AGARVAPSALVVVGGAVQPTLCS*SKMKLL
Trigger: GAGCAACTTCATCTTCGACAAGCTGCACAAGGTGGG...CTGGACCGCTCCGCCCACCACTACAAGGGCGGAGGGGGCGACCCGGGCCCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CAA 90 bp TTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCGTGAGGGGCTCCGCCTaGCCCAGGCTGGCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: FTPHTWATRWRALTHSPAVRGSA*PRLAGV
Trigger: GACACCAGCCAGCCTGGGCAAGGCGGAGCCCCTCAC...GGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp TGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCGCATGCGGACAGAGGTaGGGGATGCGCGCAGTGCGG +
Preference number: 5 (lower is better)
Translates to: WEAGFSLPGHRLHWATFPACGQR*GMRAVR
Trigger: CCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGC...GGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS CCA 90 bp CACGACCGTTCTCGGCTCGTCGAAGGTGGCGATGAGGATCTGCTGTaGGGCAGGGATGGCGATGAGGTCCCCCACGTCCTGCGGCAGGCG +
Preference number: 5 (lower is better)
Translates to: HDRSRLVEGGDEDLL*GRDGDEVPHVLRQA
Trigger: CGCCTGCCGCAGGACGTGGGGGACCTCATCGCCATCCCTGCCCCACAGCAGATCCTCATCGCCACCTTCGACGAGCCGAGAACGGTCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395842.3
CDS-3UTR CAA 90 bp CCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCTCCTGCAGCAGGAAGTaGAGCTCGGAGGTGAGGCGC +
Preference number: 5 (lower is better)
Translates to: PGMRTEVGDARSAGEAQASCSRK*SSEVRR
Trigger: GCGCCTCACCTCCGAGCTCAACTTCCTGCTGCAGGA...GGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp GGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCACCCCAGGTGATGCCCGGGCCCTaGGACTGGATCTGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: GLQPSWPPAPLGHLSPPQVMPGP*DWICFS
Trigger: CGAGAAGCAGATCCAGTCCAAGGGCCCGGGCATCAC...CTGGGGTGGGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp GCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCGCGCCAGGTACAGCTaGGCCAGGAAGTTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: ACGQRLGMRAVRAKHRPRRARYS*ARKLLR
Trigger: CCGCAGCAACTTCCTGGCCAAGCTGTACCTGGCGCG...ACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp CAGCCGGGTGCCGGCCGGGGCTCCCACAGGAAGCCATGTGGCCTCAGCCGCGGCGTCTTGATGCCCACCTaGTGCAGCTTGTCGAAGATG +
Preference number: 5 (lower is better)
Translates to: QPGAGRGSHRKPCGLSRGVLMPT*CSLSKM
Trigger: CATCTTCGACAAGCTGCACAAGGTGGGCATCAAGAC...GCCGCGGCTGAGGCCACATGGCTTCCTGTGGGAGCCCCGGCCGGCACCCGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp GACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCACACTGCCGGCGCGTCTaGATGCCCACCTTGTGCAGC +
Preference number: 5 (lower is better)
Translates to: DRGWGCAQCGRSTGHVHAHCRRV*MPTLCS
Trigger: GCTGCACAAGGTGGGCATCAAGACGCGCCGGCAGTG...TGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp GGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGAGCCGGTTGAGCGACTaGATGTGGTCGCGGTTCTCG +
Preference number: 5 (lower is better)
Translates to: GWGCAQCGRSTGHVHAGLSRLSD*MWSRFS
Trigger: CGAGAACCGCGACCACATCAAGTCGCTCAACCGGCT...CAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp CTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCCATGAAGTCCAGCCGGTaGAGCGACTTGATGTGGTCG +
Preference number: 5 (lower is better)
Translates to: LAMPSGRVPLSSTWGRRPMKSSR*SDLMWS
Trigger: CGACCACATCAAGTCGCTCAACCGGCTGGACTTCAT...GGGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp ATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGATGGCCAGCGGCTCCTaGAAGGGCTGCGGAAGCGGG +
Preference number: 5 (lower is better)
Translates to: MQEHGKRASAFLATGSTGMASGS*KGCGSG
Trigger: CCCGCTTCCGCAGCCCTTCAAGGAGCCGCTGGCCAT...CCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCCTGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp ATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCGCGCCAGGTACAGCTaGGCCAGGAAGTTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: MGSGLQPSWPPAPLGHLSRARYS*ARKLLR
Trigger: CCGCAGCAACTTCCTGGCCAAGCTGTACCTGGCGCG...GGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp GGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCGATGATGCGCTGCAGTaGCACGGACGGGAGCTTGCA +
Preference number: 5 (lower is better)
Translates to: GAWEAGFSLPGHRLHWATDDALQ*HGRELA
Trigger: TGCAAGCTCCCGTCCGTGCAACTGCAGCGCATCATC...GGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp CAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCACCCCAGCCAGTGGATGATGCGCTGCAGTaGCACGGACGGGAGCTTGCA +
Preference number: 5 (lower is better)
Translates to: QPSWPPAPLGHLSPPQPVDDALQ*HGRELA
Trigger: TGCAAGCTCCCGTCCGTGCAACTGCAGCGCATCATC...CACTGGCTGGGGTGGGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp TCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTCACTGCCGGCGCGTCTaGATGCCCACCTTGTGCAGC +
Preference number: 5 (lower is better)
Translates to: SLLIHGPRAGVHSRTRPPHCRRV*MPTLCS
Trigger: GCTGCACAAGGTGGGCATCAAGACGCGCCGGCAGTG...AGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp CCACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCGGCTGCGGAAGCGGGTaGCTGGTGGGGATCCACTTC +
Preference number: 5 (lower is better)
Translates to: PPTAGHLMQEHGKRASAFGCGSG*LVGIHF
Trigger: GAAGTGGATCCCCACCAGCAACCCGCTTCCGCAGCC...GAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS GCA 90 bp GTACTCACGACCGTTCTCGGCTCGTCGAAGGTGGCGATGAGGATCTaGTGTGGGGCAGGGATGGCGATGAGGTCCCCCACGTCCTGCGGC +
Preference number: 5 (lower is better)
Translates to: VLTTVLGSSKVAMRI*CGAGMAMRSPTSCG
Trigger: GCCGCAGGACGTGGGGGACCTCATCGCCATCCCTGCCCCACAGCAGATCCTCATCGCCACCTTCGACGAGCCGAGAACGGTCGTGAGTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395842.3
CDS-3UTR CAA 90 bp CTGGCGATGCCGTCCGGGCGGGTTCCCCTGTCGAGCACGTGGGGGCGAAGGCCCAAGAGGTGGATGAGGTaGACGAGGATGATGAGGTTC +
Preference number: 5 (lower is better)
Translates to: LAMPSGRVPLSSTWGRRPKRWMR*TRMMRF
Trigger: GAACCTCATCATCCTCGTCAACCTCATCCACCTCTT...GGGCCTTCGCCCCCACGTGCTCGACAGGGGAACCCGCCCGGACGGCATCGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp GGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCAGGGCTGGTGTATGAAGTCCAGCCGGTaGAGCGACTTGATGTGGTCG +
Preference number: 5 (lower is better)
Translates to: GDARSAGEAQATSTQGWCMKSSR*SDLMWS
Trigger: CGACCACATCAAGTCGCTCAACCGGCTGGACTTCAT...ACACCAGCCCTGCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp GGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCACCCCAGATGAGGTCGCTCTCGTaGGTGATGAAGTCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: GLQPSWPPAPLGHLSPPQMRSLS*VMKSSR
Trigger: CCGGCTGGACTTCATCACCAACGAGAGCGACCTCAT...CTGGGGTGGGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp GGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGCACAGGCCACGTCCACGCATGAGGTCGCTCTCGTaGGTGATGAAGTCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: GQRLGMRAVRAKHRPRPRMRSLS*VMKSSR
Trigger: CCGGCTGGACTTCATCACCAACGAGAGCGACCTCAT...GCGTGGACGTGGCCTGTGCTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp GGATGTAGGGGTGCACGTCCAGGGAGAAGTGGCGCGCGTGCTTCTTGTCAGGGGGGCTGCGGAAGCGGGTaGCTGGTGGGGATCCACTTC +
Preference number: 5 (lower is better)
Translates to: GCRGARPGRSGARASCQGGCGSG*LVGIHF
Trigger: GAAGTGGATCCCCACCAGCAACCCGCTTCCGCAGCC...CCCCTGACAAGAAGCACGCGCGCCACTTCTCCCTGGACGTGCACCCCTACATCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CAA 90 bp GGTGGGGATCCACTTCATCTTCTTGCGCGGCCGCTTGACCACGGGCGGCTCGGCTTCGGCTTCTCCGCCTaGCTGTTCTCCACGCGCATG +
Preference number: 5 (lower is better)
Translates to: GGDPLHLLARPLDHGRLGFGFSA*LFSTRM
Trigger: CATGCGCGTGGAGAACAGCAAGGCGGAGAAGCCGAA...GCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGAAGATGAAGTGGATCCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CAA 90 bp GCGACAAGGAGAAAGTGCACGTTGACCTTTGACCCGAGGGTGGACCTCGGTCCCGGCACCGCCTCGGCCTaGGCCTTCTTGGTGCCGAGG +
Preference number: 5 (lower is better)
Translates to: ATRRKCTLTFDPRVDLGPGTASA*AFLVPR
Trigger: CCTCGGCACCAAGAAGGCCAAGGCCGAGGCGGTGCC...GGGACCGAGGTCCACCCTCGGGTCAAAGGTCAACGTGCACTTTCTCCTTGTCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp ATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCATGGCTGAGGTATTaGGGGTGGGACCAGCCGGGT +
Preference number: 5 (lower is better)
Translates to: MGSGLQPSWPPAPLGHLSPWLRY*GWDQPG
Trigger: ACCCGGCTGGTCCCACCCCAAATACCTCAGCCATGG...GGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp CAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCACCCCAGCCAGTGCACCCTGCGAAGTTCTaGGTGAAGACCAGGGTGACC +
Preference number: 5 (lower is better)
Translates to: QPSWPPAPLGHLSPPQPVHPAKF*VKTRVT
Trigger: GGTCACCCTGGTCTTCACCAAGAACTTCGCAGGGTG...CACTGGCTGGGGTGGGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CAA 90 bp TGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCGCCTCGTACAGCGTGTaGATGTGCAGCAGCGGGTGT +
Preference number: 5 (lower is better)
Translates to: WEAGFSLPGHRLHWATFPASYSV*MCSSGC
Trigger: ACACCCGCTGCTGCACATCAACACGCTGTACGAGGC...GGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395842.3
CDS-3UTR CAA 90 bp AGTTGCTGCGGCCGCGGCGCTCCAGGTACTTCTCGAACAGGTTCTGCTCCGGGCGATGATGCGCTGCAGTaGCACGGACGGGAGCTTGCA +
Preference number: 5 (lower is better)
Translates to: SCCGRGAPGTSRTGSAPGDDALQ*HGRELA
Trigger: TGCAAGCTCCCGTCCGTGCAACTGCAGCGCATCATC...GCCCGGAGCAGAACCTGTTCGAGAAGTACCTGGAGCGCCGCGGCCGCAGCAACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CAA 90 bp ATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCAGCCGGTTGAGCGACTaGATGTGGTCGCGGTTCTCG +
Preference number: 5 (lower is better)
Translates to: MGSGLQPSWPPAPLGHLSSRLSD*MWSRFS
Trigger: CGAGAACCGCGACCACATCAAGTCGCTCAACCGGCT...GGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp TCGTACATGAGGTCGCTCTCGTTGGTGATGAAGTCCAGCCGGTTGAGCGACTTGGGGGTGGCGTCGTGGTaGGACTGCGCCAGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: SYMRSLSLVMKSSRLSDLGVASW*DCASAA
Trigger: GGCGGCGCTGGCGCAGTCCAACCACGACGCCACCCC...CAAGTCGCTCAACCGGCTGGACTTCATCACCAACGAGAGCGACCTCATGTACGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CAA 90 bp CCTGCCCGGGCTGGCTCTGTGGGGTACGGGATTTCCTTCTCGGGGAGCGGAGCAATCCACTTCATCTTCTaGCGCGGCCGCTTGACCACG +
Preference number: 5 (lower is better)
Translates to: PARAGSVGYGISFSGSGAIHFIF*RGRLTT
Trigger: CGTGGTCAAGCGGCCGCGCAAGAAGATGAAGTGGAT...TGCTCCGCTCCCCGAGAAGGAAATCCCGTACCCCACAGAGCCAGCCCGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CAA 90 bp TTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTTCGGCTTCTCCGCCTaGCTGTTCTCCACGCGCATG +
Preference number: 5 (lower is better)
Translates to: FTPHTWATRWRALTHSPAFGFSA*LFSTRM
Trigger: CATGCGCGTGGAGAACAGCAAGGCGGAGAAGCCGAA...GGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp GGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCCCACCCCAGGACGTGGTTATTGCGTaGGGCCCCTTCACTCCTCAT +
Preference number: 5 (lower is better)
Translates to: GLQPSWPPAPLGHLSPPQDVVIA*GPFTPH
Trigger: ATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTC...CTGGGGTGGGGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp TGGGCTGGGGGAGTTGGGCTGTCTCGCCACAGCCCGGGGCCAGGACGAAACGGAGACGTGGTTATTGCGTaGGGCCCCTTCACTCCTCAT +
Preference number: 5 (lower is better)
Translates to: WAGGVGLSRHSPGPGRNGDVVIA*GPFTPH
Trigger: ATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTC...TCCGTTTCGTCCTGGCCCCGGGCTGTGGCGAGACAGCCCAACTCCCCCAGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp TCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTTGGGGGACGTGGTTATaGCGTTGGGCCCCTTCACTC +
Preference number: 5 (lower is better)
Translates to: SLLIHGPRAGVHSRTRPPWGTWL*RWAPSL
Trigger: GAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCA...AGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp AGCAGGAAGTTGAGCTCGGAGGTGAGGCGCGTGGAGGCCAGGAACTCCCAGCCCTGGTCGCGGTTCTCGTaGCAGAACATGGCCAGGATG +
Preference number: 5 (lower is better)
Translates to: SRKLSSEVRRVEARNSQPWSRFS*QNMARM
Trigger: CATCCTGGCCATGTTCTGCAACGAGAACCGCGACCA...GGGCTGGGAGTTCCTGGCCTCCACGCGCCTCACCTCCGAGCTCAACTTCCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CAA 90 bp ACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCTTTCGGCTTCTCCGCCTaGCTGTTCTCCACGCGCATG +
Preference number: 5 (lower is better)
Translates to: THGWAPDAGAWEAGFSLPFGFSA*LFSTRM
Trigger: CATGCGCGTGGAGAACAGCAAGGCGGAGAAGCCGAA...AGGAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS TCA 90 bp GCTCCGTCCAGCAGTAGCCGCGGGCGTACAGCGCCTGGTCGCGCGTaGAGTTGTGCGGGGTGTAACAGTAAATGGGTTCCTCTGCGAAGT +
Preference number: 5 (lower is better)
Translates to: APSSSSRGRTAPGRA*SCAGCNSKWVPLRS
Trigger: ACTTCGCAGAGGAACCCATTTACTGTTACACCCCGCACAACTTCACGCGCGACCAGGCGCTGTACGCCCGCGGCTACTGCTGGACGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp TTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTCCTCTGCGAAGTTCTaGGTGAAGACCAGGGTGACC +
Preference number: 5 (lower is better)
Translates to: FTPHTWATRWRALTHSPASSAKF*VKTRVT
Trigger: GGTCACCCTGGTCTTCACCAAGAACTTCGCAGAGGA...GGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp CGAAGGCCCCAGGCATGCGGACAGAGGTTGGGGATGCGCGCAGTGCGGGCGAAGAAGAGGTGGATGAGGTaGACGAGGATGATGAGGTTC +
Preference number: 5 (lower is better)
Translates to: RRPQACGQRLGMRAVRAKKRWMR*TRMMRF
Trigger: GAACCTCATCATCCTCGTCAACCTCATCCACCTCTT...CTTCGCCCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGCCTGGGGCCTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp ACCCACGGCTGGGCACCTGATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCTTGGTCGCGGTTCTCGTaGCAGAACATGGCCAGGATG +
Preference number: 5 (lower is better)
Translates to: THGWAPDAGAWEAGFSLPWSRFS*QNMARM
Trigger: CATCCTGGCCATGTTCTGCAACGAGAACCGCGACCA...AGGAAGGCTGAAGCCCGCTTCCCATGCTCCTGCATCAGGTGCCCAGCCGTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp CGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCGATGAGGATAGCGTGTaGATGTGCAGCAGCGGGTGT +
Preference number: 5 (lower is better)
Translates to: RWAPSLLIHGPRAGVHSRDEDSV*MCSSGC
Trigger: ACACCCGCTGCTGCACATCAACACGCTATCCTCATC...GCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000159647.9
CDS-3UTR CAA 90 bp ATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCGATGAGGATAGCGTGTaGATGTGCAGCAGCGGGTGT +
Preference number: 5 (lower is better)
Translates to: MGSGLQPSWPPAPLGHLSDEDSV*MCSSGC
Trigger: ACACCCGCTGCTGCACATCAACACGCTATCCTCATC...GGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000402472.2
CDS-3UTR CAA 90 bp TGCACGTTGACCTTTGACCCGAGGGTGGACCTCGGTCCCTCCCACCCGAGGGCAAGGAGAAAGTGCACGTaGACCTTTGACCCGAGGGTG +
Preference number: 5 (lower is better)
Translates to: CTLTFDPRVDLGPSHPRARRKCT*TFDPRV
Trigger: CACCCTCGGGTCAAAGGTCAACGTGCACTTTCTCCT...TGCCCTCGGGTGGGAGGGACCGAGGTCCACCCTCGGGTCAAAGGTCAACGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp GGGCCCGGGTGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATTGGGGGACGTGGTTATaGCGTTGGGCCCCTTCACTC +
Preference number: 5 (lower is better)
Translates to: GPGWGTWLLRWAPSLLIHWGTWL*RWAPSL
Trigger: GAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCA...ATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCACCCGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp TGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCCCATGGCTGAGGTATTaGGGGTGGGACCAGCCGGGT +
Preference number: 5 (lower is better)
Translates to: WGTWLLRWAPSLLIHGPRPWLRY*GWDQPG
Trigger: ACCCGGCTGGTCCCACCCCAAATACCTCAGCCATGG...GCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp CTCCAGGTACTTCTCGAACAGGTTCTGCTCCGGGCTCTTCTCCTTCTCCGCGTTCGCGCCAGGTACAGCTaGGCCAGGAAGTTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: LQVLLEQVLLRALLLLRVRARYS*ARKLLR
Trigger: CCGCAGCAACTTCCTGGCCAAGCTGTACCTGGCGCG...AACGCGGAGAAGGAGAAGAGCCCGGAGCAGAACCTGTTCGAGAAGTACCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CAA 90 bp CACTTCATCTTCTTGCGCGGCCGCTTGACCACGGGCGGCTCGGCGGCGCCGTCGTTGTCGAAGATGAAGTaGCTCTTGCGGAAGATGAAG +
Preference number: 5 (lower is better)
Translates to: HFIFLRGRLTTGGSAAPSLSKMK*LLRKMK
Trigger: CTTCATCTTCCGCAAGAGCAACTTCATCTTCGACAA...CGACGGCGCCGCCGAGCCGCCCGTGGTCAAGCGGCCGCGCAAGAAGATGAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CAA 90 bp TGCACGTTGACCTTTGACCCGAGGGTGGACCTCGGTCCCTCCCACCCGAGGGCACCCACCTTGTGCAGCTaGTCGAAGATGAAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: CTLTFDPRVDLGPSHPRAPTLCS*SKMKLL
Trigger: GAGCAACTTCATCTTCGACAAGCTGCACAAGGTGGG...TGCCCTCGGGTGGGAGGGACCGAGGTCCACCCTCGGGTCAAAGGTCAACGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp CGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCGTCTTGATGCCCACCTaGTGCAGCTTGTCGAAGATG +
Preference number: 5 (lower is better)
Translates to: RWAPSLLIHGPRAGVHSRVLMPT*CSLSKM
Trigger: CATCTTCGACAAGCTGCACAAGGTGGGCATCAAGAC...GCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp ATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGCCACCTTTCCGTCTTGATGCCCACCTaGTGCAGCTTGTCGAAGATG +
Preference number: 5 (lower is better)
Translates to: MGSGLQPSWPPAPLGHLSVLMPT*CSLSKM
Trigger: CATCTTCGACAAGCTGCACAAGGTGGGCATCAAGAC...GGAAAGGTGGCCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp TCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCACTCGCCCGCCTAACATGGCCAGGATGTaGATGTCGCAGAACTGCGAG +
Preference number: 5 (lower is better)
Translates to: SLLIHGPRAGVHSRTRPPNMARM*MSQNCE
Trigger: CTCGCAGTTCTGCGACATCAACATCCTGGCCATGTT...AGGCGGGCGAGTGCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp TTCCTGCGCGCGGGCTTCGGCTTCTCCGCCTTGCTGTTCTCCACGCGCATGATGATGAAGTCCAGCCGGTaGAGCGACTTGATGTGGTCG +
Preference number: 5 (lower is better)
Translates to: FLRAGFGFSALLFSTRMMMKSSR*SDLMWS
Trigger: CGACCACATCAAGTCGCTCAACCGGCTGGACTTCAT...CATCATGCGCGTGGAGAACAGCAAGGCGGAGAAGCCGAAGCCCGCGCGCAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CAA 90 bp ATGCAGGAGCATGGGAAGCGGGCTTCAGCCTTCCTGGCCACCGGCTCCACTGGGAAGAGGTGGATGAGGTaGACGAGGATGATGAGGTTC +
Preference number: 5 (lower is better)
Translates to: MQEHGKRASAFLATGSTGKRWMR*TRMMRF
Trigger: GAACCTCATCATCCTCGTCAACCTCATCCACCTCTT...CCCAGTGGAGCCGGTGGCCAGGAAGGCTGAAGCCCGCTTCCCATGCTCCTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS-3UTR CAA 90 bp TGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCATCCACTTCATCTTCTaGCGCGGCCGCTTGACCACG +
Preference number: 5 (lower is better)
Translates to: WGTWLLRWAPSLLIHGPRIHFIF*RGRLTT
Trigger: CGTGGTCAAGCGGCCGCGCAAGAAGATGAAGTGGAT...GCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp CATGCCCGTTCACACACACACCATCCTGCTTTAAACCCATCCTGTCTCCTGATGGGGAGCGGAGCATCTTaGATGGGCGCCGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: HARSHTHHPALNPSCLLMGSGAS*MGAGAR
Trigger: CCTGGCCCCGGCGCCCATCAAAGATGCTCCGCTCCC...CATCAGGAGACAGGATGGGTTTAAAGCAGGATGGTGTGTGTGTGAACGGGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp TGGGGGACGTGGTTATTGCGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCTCCTCTGCGAAGTTCTaGGTGAAGACCAGGGTGACC +
Preference number: 5 (lower is better)
Translates to: WGTWLLRWAPSLLIHGPRSSAKF*VKTRVT
Trigger: GGTCACCCTGGTCTTCACCAAGAACTTCGCAGAGGA...GCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACGCAATAACCACGTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp TCCCTCCCACCCGAGGGCATCAGGTCCCTGCAGGGGGTGACCCCTGAGCATGTGTTGTCGAAGATGAAGTaGCTCTTGCGGAAGATGAAG +
Preference number: 5 (lower is better)
Translates to: SLPPEGIRSLQGVTPEHVLSKMK*LLRKMK
Trigger: CTTCATCTTCCGCAAGAGCAACTTCATCTTCGACAA...CACATGCTCAGGGGTCACCCCCTGCAGGGACCTGATGCCCTCGGGTGGGAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp CGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCTTGTCGAAGATGAAGTaGCTCTTGCGGAAGATGAAG +
Preference number: 5 (lower is better)
Translates to: RWAPSLLIHGPRAGVHSRLSKMK*LLRKMK
Trigger: CTTCATCTTCCGCAAGAGCAACTTCATCTTCGACAA...GCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp CACGCTCACCTCTGCTCATGCCCGTTCACACACACACCATCCTGCTTTAAACCCAGCTGCCGGACCACGTaGTCGTACATGAGGTCGCTC +
Preference number: 5 (lower is better)
Translates to: HAHLCSCPFTHTPSCFKPSCRTT*SYMRSL
Trigger: GAGCGACCTCATGTACGACAACGTGGTCCGGCAGCT...GGGTTTAAAGCAGGATGGTGTGTGTGTGAACGGGCATGAGCAGAGGTGAGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp CGTTGGGCCCCTTCACTCCTCATACATGGGCCACGCGCTGGCGTGCACTCACGCATGCTCGGTGCTACCTaGTTAATTCTGCATGACATG +
Preference number: 5 (lower is better)
Translates to: RWAPSLLIHGPRAGVHSRMLGAT*LILHDM
Trigger: CATGTCATGCAGAATTAACAAGGTAGCACCGAGCAT...GCGTGAGTGCACGCCAGCGCGTGGCCCATGTATGAGGAGTGAAGGGGCCCAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp TGCACGTTGACCTTTGACCCGAGGGTGGACCTCGGTCCCTCCCACCCGAGGGCAATGCTCGGTGCTACCTaGTTAATTCTGCATGACATG +
Preference number: 5 (lower is better)
Translates to: CTLTFDPRVDLGPSHPRAMLGAT*LILHDM
Trigger: CATGTCATGCAGAATTAACAAGGTAGCACCGAGCAT...TGCCCTCGGGTGGGAGGGACCGAGGTCCACCCTCGGGTCAAAGGTCAACGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp AACTCCACAGTACTCACGACCGTTCTCGGCTCGTCGAAGGTGGCGATGAGGATAATGAGGTCGCTCTCGTaGGTGATGAAGTCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: NSTVLTTVLGSSKVAMRIMRSLS*VMKSSR
Trigger: CCGGCTGGACTTCATCACCAACGAGAGCGACCTCAT...TATCCTCATCGCCACCTTCGACGAGCCGAGAACGGTCGTGAGTACTGTGGAGTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CAA 90 bp ATGCTCGGTGCTACCTTGTTAATTCTGCATGACATGGTCTCCATGGCTGAGGTAGCATGCGGACAGAGGTaGGGGATGCGCGCAGTGCGG +
Preference number: 5 (lower is better)
Translates to: MLGATLLILHDMVSMAEVACGQR*GMRAVR
Trigger: CCGCACTGCGCGCATCCCCAACCTCTGTCCGCATGC...TACCTCAGCCATGGAGACCATGTCATGCAGAATTAACAAGGTAGCACCGAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp CTCCAGGTACTTCTCGAACAGGTTCTGCTCCGGGCTCTTCTCCTTCTCCGCGTTAACATGGCCAGGATGTaGATGTCGCAGAACTGCGAG +
Preference number: 5 (lower is better)
Translates to: LQVLLEQVLLRALLLLRVNMARM*MSQNCE
Trigger: CTCGCAGTTCTGCGACATCAACATCCTGGCCATGTT...AACGCGGAGAAGGAGAAGAGCCCGGAGCAGAACCTGTTCGAGAAGTACCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402472.2
CDS-3UTR CAA 90 bp ACGCTCACCTCTGCTCATGCCCGTTCACACACACACCATCCTGCTTTAAACCCAATCCACTTCATCTTCTaGCGCGGCCGCTTGACCACG +
Preference number: 5 (lower is better)
Translates to: TLTSAHARSHTHHPALNPIHFIF*RGRLTT
Trigger: CGTGGTCAAGCGGCCGCGCAAGAAGATGAAGTGGAT...TGGGTTTAAAGCAGGATGGTGTGTGTGTGAACGGGCATGAGCAGAGGTGAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp ATGCTCGGTGCTACCTTGTTAATTCTGCATGACATGGTCTCCATGGCTGAGGTATCCTGCAGCAGGAAGTaGAGCTCGGAGGTGAGGCGC +
Preference number: 5 (lower is better)
Translates to: MLGATLLILHDMVSMAEVSCSRK*SSEVRR
Trigger: GCGCCTCACCTCCGAGCTCAACTTCCTGCTGCAGGA...TACCTCAGCCATGGAGACCATGTCATGCAGAATTAACAAGGTAGCACCGAGCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp ATGCTCGGTGCTACCTTGTTAATTCTGCATGACATGGTCTCCATGGCTGAGGTAAGGAGAAAGTGCACGTaGACCTTTGACCCGAGGGTG +
Preference number: 5 (lower is better)
Translates to: MLGATLLILHDMVSMAEVRRKCT*TFDPRV
Trigger: CACCCTCGGGTCAAAGGTCAACGTGCACTTTCTCCT...TACCTCAGCCATGGAGACCATGTCATGCAGAATTAACAAGGTAGCACCGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp CACACACCATCCTGCTTTAAACCCATCCTGTCTCCTGATGATAAATATGCTTGTCCCACCTTGTGCAGCTaGTCGAAGATGAAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: HTPSCFKPILSPDDKYACPTLCS*SKMKLL
Trigger: GAGCAACTTCATCTTCGACAAGCTGCACAAGGTGGG...ACAAGCATATTTATCATCAGGAGACAGGATGGGTTTAAAGCAGGATGGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS-3UTR CAA 90 bp TCCTGTCTCCTGATGATAAATATGCTTGTTCGGTACAGCAGTCTTAGTAAAATAAACATGGCCAGGATGTaGATGTCGCAGAACTGCGAG +
Preference number: 5 (lower is better)
Translates to: SCLLMINMLVRYSSLSKINMARM*MSQNCE
Trigger: CTCGCAGTTCTGCGACATCAACATCCTGGCCATGTT...TATTTTACTAAGACTGCTGTACCGAACAAGCATATTTATCATCAGGAGACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159647.9
ENST00000395842.3
CDS GCA 72 bp AGAAGCAGCGCGGCCAGCGCGCCCGCCTTGTCGTCCTaGGCGCCCGGCAGGATCAGCTCCCGCAGCTTCTCT +
Preference number: 6 (lower is better)
Translates to: RSSAASAPALSS*APGRISSRSFS
Trigger: AGAGAAGCTGCGGGAGCTGATCCTGCCGGGCGCGCAGGACGACAAGGCGGGCGCGCTGGCCGCGCTGCTTCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS CAA 90 bp AGCTCCAGCTTCAGCTGCAGAAGCAGCGCGGCCAGCGCGCCCGCCTaGTCGTCCTGCGCGCCCGGCAGGATCAGCTCCCGCAGCTTCTCT +
Preference number: 6 (lower is better)
Translates to: SSSFSCRSSAASAPA*SSCAPGRISSRSFS
Trigger: AGAGAAGCTGCGGGAGCTGATCCTGCCGGGCGCGCAGGACGACAAGGCGGGCGCGCTGGCCGCGCTGCTTCTGCAGCTGAAGCTGGAGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159647.9
ENST00000395842.3
ENST00000402472.2
CDS CAA 90 bp AGGCGGGGGCCCCCGTCCTCCTCCTCCCGGGCCTCGTACAGCGTGTaGATGTGCAGCAGCGGGTGTGTGGCGTTTCGGCTCAGGATGGTG +
Preference number: 6 (lower is better)
Translates to: RRGPPSSSSRASYSV*MCSSGCVAFRLRMV
Trigger: CACCATCCTGAGCCGAAACGCCACACACCCGCTGCTGCACATCAACACGCTGTACGAGGCCCGGGAGGAGGAGGACGGGGGCCCCCGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395842.3
CDS CCA 72 bp TCTCGGCTCGTCGAAGGTGGCGATGAGGATCTGCTGTaGGGCAGGGATGGCGATGAGGTCCCCCACGTCCTG +
Preference number: 6 (lower is better)
Translates to: SRLVEGGDEDLL*GRDGDEVPHVL
Trigger: CAGGACGTGGGGGACCTCATCGCCATCCCTGCCCCACAGCAGATCCTCATCGCCACCTTCGACGAGCCGAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395842.3
CDS GCA 72 bp TCCTCCTCCTCCCGGGCCTCGTACAGCGTGTTGATGTaGAGCAGCGGGTGTGTGGCGTTTCGGCTCAGGATG +
Preference number: 6 (lower is better)
Translates to: SSSSRASYSVLM*SSGCVAFRLRM
Trigger: CATCCTGAGCCGAAACGCCACACACCCGCTGCTGCACATCAACACGCTGTACGAGGCCCGGGAGGAGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395842.3