RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PANX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000110218

Ensembl transcript IDs: ENST00000227638.8, ENST00000436171.2

Found 267 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATCTTGTTAACTCAGTTTTCAGTCAGAGCAGCACTTGGGCCTGCTaGCCTTCAAGGCACAGTGCAACAAATAGTGGTTACGGGATTTCC +
Preference number: 1 (lower is better)
Translates to: HLVNSVFSQSSTWAC*PSRHSATNSGYGIS
Trigger: GGAAATCCCGTAACCACTATTTGTTGCACTGTGCCTTGAAGGGCAGCAGGCCCAAGTGCTGCTCTGACTGAAAACTGAGTTAACAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR CCA 90 bp CATCAGCCAAGGTTGACAACTAACAATGTAAAGAGAGCTCGAGTGTaGGCCAAGGCATCGGACCTTACACCTAACTTAGGACATAGGTCG +
Preference number: 1 (lower is better)
Translates to: HQPRLTTNNVKRARV*AKASDLTPNLGHRS
Trigger: CGACCTATGTCCTAAGTTAGGTGTAAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATTGTTAGTTGTCAACCTTGGCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR GCA 90 bp TTTCATCTTGTTAACTCAGTTTTCAGTCAGAGCAGCACTTGGGCCTaGTGCCCTTCAAGGCACAGTGCAACAAATAGTGGTTACGGGATT +
Preference number: 1 (lower is better)
Translates to: FHLVNSVFSQSSTWA*CPSRHSATNSGYGI
Trigger: AATCCCGTAACCACTATTTGTTGCACTGTGCCTTGAAGGGCAGCAGGCCCAAGTGCTGCTCTGACTGAAAACTGAGTTAACAAGATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR TCA 90 bp CATGCTCAGTATCTCCACCAAGAACCATTTATTGCAAACCAGCTGTaGAACCAACAGGGGTGCTTTAGCCAAATTAAATCCCATGTCGCA +
Preference number: 1 (lower is better)
Translates to: HAQYLHQEPFIANQL*NQQGCFSQIKSHVA
Trigger: TGCGACATGGGATTTAATTTGGCTAAAGCACCCCTGTTGGTTTCACAGCTGGTTTGCAATAAATGGTTCTTGGTGGAGATACTGAGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR TCA 90 bp CTCCAAGCACGCCATATGAAGCATGCCAATGTCACTTATGTGCCCTaGTCACATTCAGGCAAAGTGTTCTTCACTTTAAATACTCCTGTG +
Preference number: 1 (lower is better)
Translates to: LQARHMKHANVTYVP*SHSGKVFFTLNTPV
Trigger: CACAGGAGTATTTAAAGTGAAGAACACTTTGCCTGAATGTGATCAGGGCACATAAGTGACATTGGCATGCTTCATATGGCGTGCTTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR TCA 90 bp GTCAGATTTCCCCACTGGGCTCTTTTGGAAGCATTCTTCCTGAATTaGAGTCACTGTGAATATCCTTTAGATTTCATCTTGTTAACTCAG +
Preference number: 1 (lower is better)
Translates to: VRFPHWALLEAFFLN*SHCEYPLDFILLTQ
Trigger: CTGAGTTAACAAGATGAAATCTAAAGGATATTCACAGTGACTTCAATTCAGGAAGAATGCTTCCAAAAGAGCCCAGTGGGGAAATCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR GCA 90 bp TTGTCTTTCTGCTTTTCATTTGATGAGGACTTACACATAGTTACTTaGTGCAGTTTACTATCTCTCAGGTGCTTCCTATGGGAAGTTCAT +
Preference number: 1 (lower is better)
Translates to: LSFCFSFDEDLHIVT*CSLLSLRCFLWEVH
Trigger: ATGAACTTCCCATAGGAAGCACCTGAGAGATAGTAAACTGCAGCAAGTAACTATGTGTAAGTCCTCATCAAATGAAAAGCAGAAAGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR GCA 90 bp TCTTTCTGCTTTTCATTTGATGAGGACTTACACATAGTTACTTGCTaGAGTTTACTATCTCTCAGGTGCTTCCTATGGGAAGTTCATAAA +
Preference number: 1 (lower is better)
Translates to: SFCFSFDEDLHIVTC*SLLSLRCFLWEVHK
Trigger: TTTATGAACTTCCCATAGGAAGCACCTGAGAGATAGTAAACTGCAGCAAGTAACTATGTGTAAGTCCTCATCAAATGAAAAGCAGAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR GCA 90 bp AGCATGCCAATGTCACTTATGTGCCCTGATCACATTCAGGCAAAGTGTTCTTCAAGCAGCACTTGGGCCTaGTGCCCTTCAAGGCACAGT +
Preference number: 2 (lower is better)
Translates to: SMPMSLMCPDHIQAKCSSSSTWA*CPSRHS
Trigger: ACTGTGCCTTGAAGGGCAGCAGGCCCAAGTGCTGCT...TGAAGAACACTTTGCCTGAATGTGATCAGGGCACATAAGTGACATTGGCATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR TCA 90 bp TTGACAACTAACAATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTATTGCAAACCAGCTGTaGAACCAACAGGGGTGCTTT +
Preference number: 2 (lower is better)
Translates to: LTTNNVKRARVWAKASDLIANQL*NQQGCF
Trigger: AAAGCACCCCTGTTGGTTTCACAGCTGGTTTGCAAT...AAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATTGTTAGTTGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR TCA 90 bp AATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTACACCTAACTTAATTGCAAACCAGCTGTaGAACCAACAGGGGTGCTTT +
Preference number: 2 (lower is better)
Translates to: NVKRARVWAKASDLTPNLIANQL*NQQGCF
Trigger: AAAGCACCCCTGTTGGTTTCACAGCTGGTTTGCAAT...TAAGTTAGGTGTAAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR TCA 90 bp AAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTACACCTAACTTAGGACATTCCATAACCTTTTGTTaGTCACCATTTCCATTAGGG +
Preference number: 2 (lower is better)
Translates to: KRARVWAKASDLTPNLGHSITFC*SPFPLG
Trigger: CCCTAATGGAAATGGTGATCAACAAAAGGTTATGGA...ATGTCCTAAGTTAGGTGTAAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR TCA 90 bp CAAATCTTCCAAAGTGCTTGTTTTCCAGTAGCTCTGGGTCTTGTCTCACCACGGCAGGGCTACTGCTCTTaGCTAATTGTTCTTGTCTTT +
Preference number: 2 (lower is better)
Translates to: QIFQSACFPVALGLVSPRQGYCS*LIVLVF
Trigger: AAAGACAAGAACAATTAGTCAAGAGCAGTAGCCCTG...CCGTGGTGAGACAAGACCCAGAGCTACTGGAAAACAAGCACTTTGGAAGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR TCA 90 bp AAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTACACCTAACTTAGGACATTGGATTATTAGCCAGTaGATGCTTTTCTTGTCTAAC +
Preference number: 2 (lower is better)
Translates to: KRARVWAKASDLTPNLGHWIISQ*MLFLSN
Trigger: GTTAGACAAGAAAAGCATTCACTGGCTAATAATCCA...ATGTCCTAAGTTAGGTGTAAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR GCA 90 bp TTGACAACTAACAATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTGGACTCAATAAGACATaGTCAGTATCTCCACCAAGA +
Preference number: 2 (lower is better)
Translates to: LTTNNVKRARVWAKASDLGLNKT*SVSPPR
Trigger: TCTTGGTGGAGATACTGAGCATGTCTTATTGAGTCC...AAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATTGTTAGTTGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR GCA 90 bp TCTTTATTCTATAATTCTCCACCAGTGCTAGAATTTTCTTCCCAAATGGCCTCAAGCACTTGGGCCTGCTaGCCTTCAAGGCACAGTGCA +
Preference number: 2 (lower is better)
Translates to: SLFYNSPPVLEFSSQMASSTWAC*PSRHSA
Trigger: TGCACTGTGCCTTGAAGGGCAGCAGGCCCAAGTGCT...TGAGGCCATTTGGGAAGAAAATTCTAGCACTGGTGGAGAATTATAGAATAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR CCA 90 bp CTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTGAAAGTCAGAGCAGCACTTaGGCCTGCTGCCCTTCAAGG +
Preference number: 2 (lower is better)
Translates to: LFQMPLITEKPPVDKLFESQSST*ACCPSR
Trigger: CCTTGAAGGGCAGCAGGCCCAAGTGCTGCTCTGACT...TTCAAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR GCA 90 bp CAAATCTTCCAAAGTGCTTGTTTTCCAGTAGCTCTGGGTCTTGTCTCACCACGGCACATAGTTACTTGCTaGAGTTTACTATCTCTCAGG +
Preference number: 2 (lower is better)
Translates to: QIFQSACFPVALGLVSPRHIVTC*SLLSLR
Trigger: CCTGAGAGATAGTAAACTGCAGCAAGTAACTATGTG...CCGTGGTGAGACAAGACCCAGAGCTACTGGAAAACAAGCACTTTGGAAGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR GCA 90 bp AGCATGCCAATGTCACTTATGTGCCCTGATCACATTCAGGCAAAGTGTTCTTCATTACTATCTCTCAGGTaGTTCCTATGGGAAGTTCAT +
Preference number: 2 (lower is better)
Translates to: SMPMSLMCPDHIQAKCSSLLSLR*FLWEVH
Trigger: ATGAACTTCCCATAGGAAGCACCTGAGAGATAGTAA...TGAAGAACACTTTGCCTGAATGTGATCAGGGCACATAAGTGACATTGGCATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR CCA 90 bp AACAAAACAAATCTTCCAAAGTGCTTGTTTTCCAGTAGCTCTGGGTCTTGTCTCCTCAGGTGCTTCCTATaGGAAGTTCATAAACCATTC +
Preference number: 2 (lower is better)
Translates to: NKTNLPKCLFSSSSGSCLLRCFL*EVHKPF
Trigger: GAATGGTTTATGAACTTCCCATAGGAAGCACCTGAG...GAGACAAGACCCAGAGCTACTGGAAAACAAGCACTTTGGAAGATTTGTTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR GCA 90 bp ATCCTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTGGACTCAATAAGACATaGTCAGTATCTCCACCAAGA +
Preference number: 2 (lower is better)
Translates to: ILFQMPLITEKPPVDKLFGLNKT*SVSPPR
Trigger: TCTTGGTGGAGATACTGAGCATGTCTTATTGAGTCC...AAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR GCA 90 bp TATAATTCTCCACCAGTGCTAGAATTTTCTTCCCAAATGGCCTCAATTCGGACAACAAATCTTCCAAAGTaGTTGTTTTCCAGTAGCTCT +
Preference number: 2 (lower is better)
Translates to: YNSPPVLEFSSQMASIRTTNLPK*LFSSSS
Trigger: AGAGCTACTGGAAAACAAGCACTTTGGAAGATTTGT...TGTCCGAATTGAGGCCATTTGGGAAGAAAATTCTAGCACTGGTGGAGAATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR CCA 90 bp ATCCTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTCTCAGGTGCTTCCTATaGGAAGTTCATAAACCATTC +
Preference number: 2 (lower is better)
Translates to: ILFQMPLITEKPPVDKLFLRCFL*EVHKPF
Trigger: GAATGGTTTATGAACTTCCCATAGGAAGCACCTGAG...AAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR CAA 90 bp TGCTTCCTATGGGAAGTTCATAAACCATTCTTCCATAACCTTTTGTaGATCACCATTTCCATTAGGGACTCAATAAGACATGCTCAGTAT +
Preference number: 2 (lower is better)
Translates to: CFLWEVHKPFFHNLL*ITISIRDSIRHAQY
Trigger: ATACTGAGCATGTCTTATTGAGTCCCTAATGGAAATGGTGATCAACAAAAGGTTATGGAAGAATGGTTTATGAACTTCCCATAGGAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR TCA 90 bp ATCCTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTTCCATAACCTTTTGTTaGTCACCATTTCCATTAGGG +
Preference number: 2 (lower is better)
Translates to: ILFQMPLITEKPPVDKLFSITFC*SPFPLG
Trigger: CCCTAATGGAAATGGTGATCAACAAAAGGTTATGGA...AAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR GCA 90 bp ATCCTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTCACATAGTTACTTGCTaGAGTTTACTATCTCTCAGG +
Preference number: 2 (lower is better)
Translates to: ILFQMPLITEKPPVDKLFHIVTC*SLLSLR
Trigger: CCTGAGAGATAGTAAACTGCAGCAAGTAACTATGTG...AAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR GCA 72 bp AACTCAGTTTTCAGTCAGAGCAGCACTTGGGCCTGCTaGCCTTCAAGGCACAGTGCAACAAATAGTGGTTAC +
Preference number: 3 (lower is better)
Translates to: NSVFSQSSTWAC*PSRHSATNSGY
Trigger: GTAACCACTATTTGTTGCACTGTGCCTTGAAGGGCAGCAGGCCCAAGTGCTGCTCTGACTGAAAACTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR TCA 72 bp AAACCGCTAAGTTTTTCTGGCTCCAAGCACGCCATATaGAGCATGCCAATGTCACTTATGTGCCCTGATCAC +
Preference number: 3 (lower is better)
Translates to: KPLSFSGSKHAI*SMPMSLMCPDH
Trigger: GTGATCAGGGCACATAAGTGACATTGGCATGCTTCATATGGCGTGCTTGGAGCCAGAAAAACTTAGCGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR CCA 72 bp AGGTTGACAACTAACAATGTAAAGAGAGCTCGAGTGTaGGCCAAGGCATCGGACCTTACACCTAACTTAGGA +
Preference number: 3 (lower is better)
Translates to: RLTTNNVKRARV*AKASDLTPNLG
Trigger: TCCTAAGTTAGGTGTAAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATTGTTAGTTGTCAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR CAA 90 bp AATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTACACCTAACTTAACAGGGCTACTGCTCTaGACTAATTGTTCTTGTCTT +
Preference number: 3 (lower is better)
Translates to: NVKRARVWAKASDLTPNLTGLLL*TNCSCL
Trigger: AAGACAAGAACAATTAGTCAAGAGCAGTAGCCCTGT...TAAGTTAGGTGTAAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR CAA 90 bp CTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTGAAGGGTACAGAAAGGTATaGCTCCGAGGCTCTGACAGG +
Preference number: 3 (lower is better)
Translates to: LFQMPLITEKPPVDKLFEGYRKV*LRGSDR
Trigger: CCTGTCAGAGCCTCGGAGCAATACCTTTCTGTACCC...TTCAAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR CAA 90 bp TCTTTATTCTATAATTCTCCACCAGTGCTAGAATTTTCTTCCCAAATGGCCTCAGGGTACAGAAAGGTATaGCTCCGAGGCTCTGACAGG +
Preference number: 3 (lower is better)
Translates to: SLFYNSPPVLEFSSQMASGYRKV*LRGSDR
Trigger: CCTGTCAGAGCCTCGGAGCAATACCTTTCTGTACCC...TGAGGCCATTTGGGAAGAAAATTCTAGCACTGGTGGAGAATTATAGAATAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR CAA 90 bp AGCATGCCAATGTCACTTATGTGCCCTGATCACATTCAGGCAAAGTGTTCTTCATTCCATCAGCCAAGGTaGACAACTAACAATGTAAAG +
Preference number: 3 (lower is better)
Translates to: SMPMSLMCPDHIQAKCSSFHQPR*TTNNVK
Trigger: CTTTACATTGTTAGTTGTCAACCTTGGCTGATGGAA...TGAAGAACACTTTGCCTGAATGTGATCAGGGCACATAAGTGACATTGGCATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR TCA 72 bp TATCTCCACCAAGAACCATTTATTGCAAACCAGCTGTaGAACCAACAGGGGTGCTTTAGCCAAATTAAATCC +
Preference number: 3 (lower is better)
Translates to: YLHQEPFIANQL*NQQGCFSQIKS
Trigger: GGATTTAATTTGGCTAAAGCACCCCTGTTGGTTTCACAGCTGGTTTGCAATAAATGGTTCTTGGTGGAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR TCA 72 bp CGCCATATGAAGCATGCCAATGTCACTTATGTGCCCTaGTCACATTCAGGCAAAGTGTTCTTCACTTTAAAT +
Preference number: 3 (lower is better)
Translates to: RHMKHANVTYVP*SHSGKVFFTLN
Trigger: ATTTAAAGTGAAGAACACTTTGCCTGAATGTGATCAGGGCACATAAGTGACATTGGCATGCTTCATATGGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR GCA 72 bp TGCTTTTCATTTGATGAGGACTTACACATAGTTACTTaGTGCAGTTTACTATCTCTCAGGTGCTTCCTATGG +
Preference number: 3 (lower is better)
Translates to: CFSFDEDLHIVT*CSLLSLRCFLW
Trigger: CCATAGGAAGCACCTGAGAGATAGTAAACTGCAGCAAGTAACTATGTGTAAGTCCTCATCAAATGAAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR GCA 72 bp TTTTCATTTGATGAGGACTTACACATAGTTACTTGCTaGAGTTTACTATCTCTCAGGTGCTTCCTATGGGAA +
Preference number: 3 (lower is better)
Translates to: FSFDEDLHIVTC*SLLSLRCFLWE
Trigger: TTCCCATAGGAAGCACCTGAGAGATAGTAAACTGCAGCAAGTAACTATGTGTAAGTCCTCATCAAATGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR CAA 90 bp TCTTTATTCTATAATTCTCCACCAGTGCTAGAATTTTCTTCCCAAATGGCCTCATTCCATAACCTTTTGTaGATCACCATTTCCATTAGG +
Preference number: 3 (lower is better)
Translates to: SLFYNSPPVLEFSSQMASFHNLL*ITISIR
Trigger: CCTAATGGAAATGGTGATCAACAAAAGGTTATGGAA...TGAGGCCATTTGGGAAGAAAATTCTAGCACTGGTGGAGAATTATAGAATAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
3UTR-3UTR CAA 90 bp CTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTGAATTCCATAACCTTTTGTaGATCACCATTTCCATTAGG +
Preference number: 3 (lower is better)
Translates to: LFQMPLITEKPPVDKLFEFHNLL*ITISIR
Trigger: CCTAATGGAAATGGTGATCAACAAAAGGTTATGGAA...TTCAAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp TTTCTGGCTCCAAGCACGCCATATGAAGCATGCCAATGTCACTTATGTGCCCTGGCGCTCACAGCCAGCTaGGCCGCGCTCTTCCGGAAC +
Preference number: 4 (lower is better)
Translates to: FLAPSTPYEACQCHLCALALTAS*AALFRN
Trigger: GTTCCGGAAGAGCGCGGCGCAGCTGGCTGTGAGCGC...CAGGGCACATAAGTGACATTGGCATGCTTCATATGGCGTGCTTGGAGCCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227638.8
CDS-3UTR GCA 90 bp AATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTACACCTAACTTAAGCGATGGCCATGGCTaGGGCGCGCCAGGCTCGACC +
Preference number: 4 (lower is better)
Translates to: NVKRARVWAKASDLTPNLSDGHG*GAPGST
Trigger: GGTCGAGCCTGGCGCGCCGCAGCCATGGCCATCGCT...TAAGTTAGGTGTAAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp TTGACAACTAACAATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTGAGAGCTCCGCTTCCTaGGGTTCCACCCCGCACGCC +
Preference number: 4 (lower is better)
Translates to: LTTNNVKRARVWAKASDLESSAS*GSTPHA
Trigger: GGCGTGCGGGGTGGAACCGCAGGAAGCGGAGCTCTC...AAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATTGTTAGTTGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp CAAATCTTCCAAAGTGCTTGTTTTCCAGTAGCTCTGGGTCTTGTCTCACCACGGTGGCCAGTTGAGCGATaGCCATGGCTGCGGCGCGCC +
Preference number: 4 (lower is better)
Translates to: QIFQSACFPVALGLVSPRWPVER*PWLRRA
Trigger: GGCGCGCCGCAGCCATGGCCATCGCTCAACTGGCCA...CCGTGGTGAGACAAGACCCAGAGCTACTGGAAAACAAGCACTTTGGAAGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp TTGCAAACCAGCTGTGAAACCAACAGGGGTGCTTTAGCCAAATTAAATCCCATGTCCCAGCGACTCCGCTaGGCTCTCGCGCTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: LQTSCETNRGALAKLNPMSQRLR*ALALAA
Trigger: GGCAGCGAGCGCGAGAGCCCAGCGGAGTCGCTGGGA...CATGGGATTTAATTTGGCTAAAGCACCCCTGTTGGTTTCACAGCTGGTTTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp TTGACAACTAACAATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTTACTCCGTGGCCAGTTaGGCGATGGCCATGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LTTNNVKRARVWAKASDLYSVAS*AMAMAA
Trigger: CGCAGCCATGGCCATCGCTCAACTGGCCACGGAGTA...AAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATTGTTAGTTGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp AGCATGCCAATGTCACTTATGTGCCCTGATCACATTCAGGCAAAGTGTTCTTCAGAGAGCTCCGCTTCCTaGGGTTCCACCCCGCACGCC +
Preference number: 4 (lower is better)
Translates to: SMPMSLMCPDHIQAKCSSESSAS*GSTPHA
Trigger: GGCGTGCGGGGTGGAACCGCAGGAAGCGGAGCTCTC...TGAAGAACACTTTGCCTGAATGTGATCAGGGCACATAAGTGACATTGGCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp ACCAGCTGTGAAACCAACAGGGGTGCTTTAGCCAAATTAAATCCCATGTCGCAGCTCCCGCATCCCGCCTaGCTTTGTGTCTCGGTGCCT +
Preference number: 4 (lower is better)
Translates to: TSCETNRGALAKLNPMSQLPHPA*LCVSVP
Trigger: AGGCACCGAGACACAAAGGCAGGCGGGATGCGGGAG...CTGCGACATGGGATTTAATTTGGCTAAAGCACCCCTGTTGGTTTCACAGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp AGCATGCCAATGTCACTTATGTGCCCTGATCACATTCAGGCAAAGTGTTCTTCACGGCGTCGGGAAAGCTaGGCGGCGCCTTCACCCAGT +
Preference number: 4 (lower is better)
Translates to: SMPMSLMCPDHIQAKCSSRRRES*AAPSPS
Trigger: ACTGGGTGAAGGCGCCGCGCAGCTTTCCCGACGCCG...TGAAGAACACTTTGCCTGAATGTGATCAGGGCACATAAGTGACATTGGCATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp AGCATGCCAATGTCACTTATGTGCCCTGATCACATTCAGGCAAAGTGTTCTTCAGTTGAGCGATGGCCATaGCTGCGGCGCGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SMPMSLMCPDHIQAKCSSVERWP*LRRARL
Trigger: GAGCCTGGCGCGCCGCAGCCATGGCCATCGCTCAAC...TGAAGAACACTTTGCCTGAATGTGATCAGGGCACATAAGTGACATTGGCATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp TTGCAAACCAGCTGTGAAACCAACAGGGGTGCTTTAGCCAAATTAAATCCCATGCCAGTCGCAGCCCCTTaGACTTGGGCTCCGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LQTSCETNRGALAKLNPMPVAAP*TWAPWA
Trigger: AGCCCACGGAGCCCAAGTTCAAGGGGCTGCGACTGG...CATGGGATTTAATTTGGCTAAAGCACCCCTGTTGGTTTCACAGCTGGTTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp GGGTGCTTTAGCCAAATTAAATCCCATGTCGCAGAAGTCACAGATTTACAGCTCCGCTTTCCCTTTGCCTaGTCCCGCATCCCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GCFSQIKSHVAEVTDLQLRFPFA*SRIPPA
Trigger: GGCAGGCGGGATGCGGGAGCAGGCAAAGGGAAAGCG...GAGCTGTAAATCTGTGACTTCTGCGACATGGGATTTAATTTGGCTAAAGCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp ACCATTTCCATTAGGGACTCAATAAGACATGCTCAGTATCTCCACCAAGAACCACGGCGTCGGGAAAGCTaGGCGGCGCCTTCACCCAGT +
Preference number: 4 (lower is better)
Translates to: TISIRDSIRHAQYLHQEPRRRES*AAPSPS
Trigger: ACTGGGTGAAGGCGCCGCGCAGCTTTCCCGACGCCG...TGGTTCTTGGTGGAGATACTGAGCATGTCTTATTGAGTCCCTAATGGAAATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp ACACCTAACTTAGGACATAGGTCGACCTATGGATTATTAGCCAGTGAATGCTTTTCCCAGCGACTCCGCTaGGCTCTCGCGCTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: TPNLGHRSTYGLLASECFSQRLR*ALALAA
Trigger: GGCAGCGAGCGCGAGAGCCCAGCGGAGTCGCTGGGA...AAAGCATTCACTGGCTAATAATCCATAGGTCGACCTATGTCCTAAGTTAGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp TTGACAACTAACAATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTCCAATCGAGATCTCCTaGGCGAAGGCCAGCGAGATG +
Preference number: 4 (lower is better)
Translates to: LTTNNVKRARVWAKASDLPIEIS*AKASEM
Trigger: CATCTCGCTGGCCTTCGCGCAGGAGATCTCGATTGG...AAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATTGTTAGTTGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp ACCAGCTGTGAAACCAACAGGGGTGCTTTAGCCAAATTAAATCCCATGTCGCAGAGCAGCACTTGGGCCTaGTGCCCTTCAAGGCACAGT +
Preference number: 4 (lower is better)
Translates to: TSCETNRGALAKLNPMSQSSTWA*CPSRHS
Trigger: ACTGTGCCTTGAAGGGCAGCAGGCCCAAGTGCTGCT...CTGCGACATGGGATTTAATTTGGCTAAAGCACCCCTGTTGGTTTCACAGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp GTTTACTATCTCTCAGGTGCTTCCTATGGGAAGTTCATAAACCATTCTTCCATACGAAGGCCAGCGAGATaGGCAGCAGGGGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: VYYLSGASYGKFINHSSIRRPAR*AAGAAP
Trigger: TGGGGCTGCCCCTGCTGCTCATCTCGCTGGCCTTCG...TATGGAAGAATGGTTTATGAACTTCCCATAGGAAGCACCTGAGAGATAGTAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp TTTCTGGCTCCAAGCACGCCATATGAAGCATGCCAATGTCACTTATGTGCCCTGAGACTCGCTCTGCAGTaGGTTCTTCTGCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: FLAPSTPYEACQCHLCALRLALQ*VLLLNS
Trigger: GCTGTTCAGCAGAAGAACTCACTGCAGAGCGAGTCT...CAGGGCACATAAGTGACATTGGCATGCTTCATATGGCGTGCTTGGAGCCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp TTTCTGGCTCCAAGCACGCCATATGAAGCATGCCAATGTCACTTATGTGCCCTGGGTAACACCTGGAACTaGGCAGGCTCCATCTCTCAT +
Preference number: 4 (lower is better)
Translates to: FLAPSTPYEACQCHLCALGNTWN*AGSISH
Trigger: ATGAGAGATGGAGCCTGCTCAGTTCCAGGTGTTACC...CAGGGCACATAAGTGACATTGGCATGCTTCATATGGCGTGCTTGGAGCCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp GGTGCTTTAGCCAAATTAAATCCCATGTCGCAGAAGTCACAGATTTACAGCTCACTCCCGCATCCCGCCTaGCTTTGTGTCTCGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GALAKLNPMSQKSQIYSSLPHPA*LCVSVP
Trigger: AGGCACCGAGACACAAAGGCAGGCGGGATGCGGGAG...TGAGCTGTAAATCTGTGACTTCTGCGACATGGGATTTAATTTGGCTAAAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp TATAATTCTCCACCAGTGCTAGAATTTTCTTCCCAAATGGCCTCAATTCGGACACGCTTTCCCTTTGCCTaGTCCCGCATCCCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: YNSPPVLEFSSQMASIRTRFPFA*SRIPPA
Trigger: GGCAGGCGGGATGCGGGAGCAGGCAAAGGGAAAGCG...TGTCCGAATTGAGGCCATTTGGGAAGAAAATTCTAGCACTGGTGGAGAATTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp CTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTGAAAGCGATGGCCATGGCTaGGGCGCGCCAGGCTCGACC +
Preference number: 4 (lower is better)
Translates to: LFQMPLITEKPPVDKLFESDGHG*GAPGST
Trigger: GGTCGAGCCTGGCGCGCCGCAGCCATGGCCATCGCT...TTCAAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp TTTCTGGCTCCAAGCACGCCATATGAAGCATGCCAATGTCACTTATGTGCCCTGAATATGAGGAGCAGCTaGGAAACGCCAGAACAGCGG +
Preference number: 4 (lower is better)
Translates to: FLAPSTPYEACQCHLCALNMRSS*ETPEQR
Trigger: CCGCTGTTCTGGCGTTTCGCAGCTGCTCCTCATATT...CAGGGCACATAAGTGACATTGGCATGCTTCATATGGCGTGCTTGGAGCCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp TCTTTATTCTATAATTCTCCACCAGTGCTAGAATTTTCTTCCCAAATGGCCTCACGAAGGCCAGCGAGATaGGCAGCAGGGGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: SLFYNSPPVLEFSSQMASRRPAR*AAGAAP
Trigger: TGGGGCTGCCCCTGCTGCTCATCTCGCTGGCCTTCG...TGAGGCCATTTGGGAAGAAAATTCTAGCACTGGTGGAGAATTATAGAATAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp AAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTACACCTAACTTAGGACATAGATGCCCACGGCAATaGGTTTGCACTGAAACTGAT +
Preference number: 4 (lower is better)
Translates to: KRARVWAKASDLTPNLGHRCPRQ*VCTETD
Trigger: ATCAGTTTCAGTGCAAACTCATTGCCGTGGGCATCT...ATGTCCTAAGTTAGGTGTAAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp GGTGCTTTAGCCAAATTAAATCCCATGTCGCAGAAGTCACAGATTTACAGCTCACTTTCGCTTTCCCTTTaGCTGCTCCCGCATCCCGCC +
Preference number: 4 (lower is better)
Translates to: GALAKLNPMSQKSQIYSSLSLSL*LLPHPA
Trigger: GGCGGGATGCGGGAGCAGGCAAAGGGAAAGCGAAAG...TGAGCTGTAAATCTGTGACTTCTGCGACATGGGATTTAATTTGGCTAAAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp TTGCAAACCAGCTGTGAAACCAACAGGGGTGCTTTAGCCAAATTAAATCCCATGCATACCTTGGAGCTCTaGCGTCTGGTTCCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LQTSCETNRGALAKLNPMHTLEL*RLVPLL
Trigger: GAGCAGGGGAACCAGACGGCAGAGCTCCAAGGTATG...CATGGGATTTAATTTGGCTAAAGCACCCCTGTTGGTTTCACAGCTGGTTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227638.8
CDS-3UTR GCA 90 bp TTGACAACTAACAATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTGGTACAGAAAGGTATTaGTCCGAGGCTCTGACAGGG +
Preference number: 4 (lower is better)
Translates to: LTTNNVKRARVWAKASDLGTERY*SEALTG
Trigger: CCCTGTCAGAGCCTCGGAGCAATACCTTTCTGTACC...AAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATTGTTAGTTGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp TCTTTATTCTATAATTCTCCACCAGTGCTAGAATTTTCTTCCCAAATGGCCTCAGTTGAGCGATGGCCATaGCTGCGGCGCGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SLFYNSPPVLEFSSQMASVERWP*LRRARL
Trigger: GAGCCTGGCGCGCCGCAGCCATGGCCATCGCTCAAC...TGAGGCCATTTGGGAAGAAAATTCTAGCACTGGTGGAGAATTATAGAATAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp CAAATCTTCCAAAGTGCTTGTTTTCCAGTAGCTCTGGGTCTTGTCTCACCACGGCTTATGCAGCCACAGTaGGAGGTTTCCAGACTCGCT +
Preference number: 4 (lower is better)
Translates to: QIFQSACFPVALGLVSPRLMQPQ*EVSRLA
Trigger: AGCGAGTCTGGAAACCTCCCACTGTGGCTGCATAAG...CCGTGGTGAGACAAGACCCAGAGCTACTGGAAAACAAGCACTTTGGAAGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp GGGTGCTTTAGCCAAATTAAATCCCATGTCGCAGAAGTCACAGATTTACAGCTCAGTCAGAGCAGCACTTaGGCCTGCTGCCCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: GCFSQIKSHVAEVTDLQLSQSST*ACCPSR
Trigger: CCTTGAAGGGCAGCAGGCCCAAGTGCTGCTCTGACT...GAGCTGTAAATCTGTGACTTCTGCGACATGGGATTTAATTTGGCTAAAGCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp AAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTACACCTAACTTAGGACATACCGCTAAGTTTTTCTaGCTCCAAGCACGCCATATG +
Preference number: 4 (lower is better)
Translates to: KRARVWAKASDLTPNLGHTAKFF*LQARHM
Trigger: CATATGGCGTGCTTGGAGCCAGAAAAACTTAGCGGT...ATGTCCTAAGTTAGGTGTAAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp GTTCATAAACCATTCTTCCATAACCTTTTGTTGATCACCATTTCCATTAGGGACCCAGTCGCAGCCCCTTaGACTTGGGCTCCGTGGGCT +
Preference number: 4 (lower is better)
Translates to: VHKPFFHNLLLITISIRDPVAAP*TWAPWA
Trigger: AGCCCACGGAGCCCAAGTTCAAGGGGCTGCGACTGG...GTCCCTAATGGAAATGGTGATCAACAAAAGGTTATGGAAGAATGGTTTATGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp CAAATCTTCCAAAGTGCTTGTTTTCCAGTAGCTCTGGGTCTTGTCTCACCACGGAGTGAGTTCTTCTGCTaGACAGCCGCCCAGCAATAT +
Preference number: 4 (lower is better)
Translates to: QIFQSACFPVALGLVSPRSEFFC*TAAQQY
Trigger: ATATTGCTGGGCGGCTGTTCAGCAGAAGAACTCACT...CCGTGGTGAGACAAGACCCAGAGCTACTGGAAAACAAGCACTTTGGAAGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp AAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTACACCTAACTTAGGACATGTTTCTCAGGATCCCTaGTTTGATGCTGCACACAAA +
Preference number: 4 (lower is better)
Translates to: KRARVWAKASDLTPNLGHVSQDP*FDAAHK
Trigger: TTTGTGTGCAGCATCAAATCAGGGATCCTGAGAAAC...ATGTCCTAAGTTAGGTGTAAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp TTGACAACTAACAATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTCTCCTCTCTCATCTCTaGAGACATGGGAGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: LTTNNVKRARVWAKASDLLLSHL*RHGSFA
Trigger: GGCAAAACTCCCATGTCTGCAGAGATGAGAGAGGAG...AAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATTGTTAGTTGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp AGCATGCCAATGTCACTTATGTGCCCTGATCACATTCAGGCAAAGTGTTCTTCAAGAACACGTACTCCGTaGCCAGTTGAGCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: SMPMSLMCPDHIQAKCSSRTRTP*PVERWP
Trigger: TGGCCATCGCTCAACTGGCCACGGAGTACGTGTTCT...TGAAGAACACTTTGCCTGAATGTGATCAGGGCACATAAGTGACATTGGCATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp GTTCATAAACCATTCTTCCATAACCTTTTGTTGATCACCATTTCCATTAGGGACTACTCCGTGGCCAGTTaGGCGATGGCCATGGCTGCG +
Preference number: 4 (lower is better)
Translates to: VHKPFFHNLLLITISIRDYSVAS*AMAMAA
Trigger: CGCAGCCATGGCCATCGCTCAACTGGCCACGGAGTA...GTCCCTAATGGAAATGGTGATCAACAAAAGGTTATGGAAGAATGGTTTATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp AATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTACACCTAACTTAATTGGGTCGATCCCCTaGCCACTGCTCTTAATATTC +
Preference number: 4 (lower is better)
Translates to: NVKRARVWAKASDLTPNLIGSIP*PLLLIF
Trigger: GAATATTAAGAGCAGTGGTCAGGGGATCGACCCAAT...TAAGTTAGGTGTAAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp TTGACAACTAACAATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTATTGGGTCGATCCCCTaGCCACTGCTCTTAATATTC +
Preference number: 4 (lower is better)
Translates to: LTTNNVKRARVWAKASDLIGSIP*PLLLIF
Trigger: GAATATTAAGAGCAGTGGTCAGGGGATCGACCCAAT...AAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATTGTTAGTTGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp AATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTACACCTAACTTATCCAAGCACGCCATATaGAGCATGCCAATGTCACTT +
Preference number: 4 (lower is better)
Translates to: NVKRARVWAKASDLTPNLSKHAI*SMPMSL
Trigger: AAGTGACATTGGCATGCTTCATATGGCGTGCTTGGA...TAAGTTAGGTGTAAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp AACAAAACAAATCTTCCAAAGTGCTTGTTTTCCAGTAGCTCTGGGTCTTGTCTCAGCACTTGGGCCTGCTaGCCTTCAAGGCACAGTGCA +
Preference number: 4 (lower is better)
Translates to: NKTNLPKCLFSSSSGSCLSTWAC*PSRHSA
Trigger: TGCACTGTGCCTTGAAGGGCAGCAGGCCCAAGTGCT...GAGACAAGACCCAGAGCTACTGGAAAACAAGCACTTTGGAAGATTTGTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp TATAATTCTCCACCAGTGCTAGAATTTTCTTCCCAAATGGCCTCAATTCGGACAAGCAGCACTTGGGCCTaGTGCCCTTCAAGGCACAGT +
Preference number: 4 (lower is better)
Translates to: YNSPPVLEFSSQMASIRTSSTWA*CPSRHS
Trigger: ACTGTGCCTTGAAGGGCAGCAGGCCCAAGTGCTGCT...TGTCCGAATTGAGGCCATTTGGGAAGAAAATTCTAGCACTGGTGGAGAATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp TTTCTGGCTCCAAGCACGCCATATGAAGCATGCCAATGTCACTTATGTGCCCTGCCAATGTCACTTATGTaGCCTGATCACATTCAGGCA +
Preference number: 4 (lower is better)
Translates to: FLAPSTPYEACQCHLCALPMSLM*PDHIQA
Trigger: TGCCTGAATGTGATCAGGGCACATAAGTGACATTGG...CAGGGCACATAAGTGACATTGGCATGCTTCATATGGCGTGCTTGGAGCCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp TTTCTGGCTCCAAGCACGCCATATGAAGCATGCCAATGTCACTTATGTGCCCTGACGCCATATGAAGCATaGCAATGTCACTTATGTGCC +
Preference number: 4 (lower is better)
Translates to: FLAPSTPYEACQCHLCALTPYEA*QCHLCA
Trigger: GGCACATAAGTGACATTGGCATGCTTCATATGGCGT...CAGGGCACATAAGTGACATTGGCATGCTTCATATGGCGTGCTTGGAGCCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp AACAAAACAAATCTTCCAAAGTGCTTGTTTTCCAGTAGCTCTGGGTCTTGTCTCACTGTCTTGGAGCTCTaGCGTCTGGTTCCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: NKTNLPKCLFSSSSGSCLTVLEL*RLVPLL
Trigger: GAGCAGGGGAACCAGACGGCAGAGCTCCAAGACAGT...GAGACAAGACCCAGAGCTACTGGAAAACAAGCACTTTGGAAGATTTGTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436171.2
CDS-3UTR CCA 90 bp TTTCTGGCTCCAAGCACGCCATATGAAGCATGCCAATGTCACTTATGTGCCCTGATTGGGTACTTGAAGTaGCTTTCAGATACCTCCCAC +
Preference number: 4 (lower is better)
Translates to: FLAPSTPYEACQCHLCALIGYLK*LSDTSH
Trigger: GTGGGAGGTATCTGAAAGCCACTTCAAGTACCCAAT...CAGGGCACATAAGTGACATTGGCATGCTTCATATGGCGTGCTTGGAGCCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp AACAAAACAAATCTTCCAAAGTGCTTGTTTTCCAGTAGCTCTGGGTCTTGTCTCAGTCAGAGCAGCACTTaGGCCTGCTGCCCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: NKTNLPKCLFSSSSGSCLSQSST*ACCPSR
Trigger: CCTTGAAGGGCAGCAGGCCCAAGTGCTGCTCTGACT...GAGACAAGACCCAGAGCTACTGGAAAACAAGCACTTTGGAAGATTTGTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp TTGACAACTAACAATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTTTAGTTTCACTGTCTTaGAGCTCTGCCGTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LTTNNVKRARVWAKASDLLVSLS*SSAVWF
Trigger: GAACCAGACGGCAGAGCTCCAAGACAGTGAAACTAA...AAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATTGTTAGTTGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436171.2
CDS-3UTR TCA 90 bp GTTTACTATCTCTCAGGTGCTTCCTATGGGAAGTTCATAAACCATTCTTCCATACCACCGCAATGCACGTaGCCATCTTGTCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: VYYLSGASYGKFINHSSIPPQCT*PSCPQP
Trigger: TGGCTGTGGACAAGATGGTCACGTGCATTGCGGTGG...TATGGAAGAATGGTTTATGAACTTCCCATAGGAAGCACCTGAGAGATAGTAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp GGTGCTTTAGCCAAATTAAATCCCATGTCGCAGAAGTCACAGATTTACAGCTCATCCACAAAGGCAGCCTaGCGCCAGGAGAAAGAACTT +
Preference number: 4 (lower is better)
Translates to: GALAKLNPMSQKSQIYSSSTKAA*RQEKEL
Trigger: AAGTTCTTTCTCCTGGCGTCAGGCTGCCTTTGTGGA...TGAGCTGTAAATCTGTGACTTCTGCGACATGGGATTTAATTTGGCTAAAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp ACACCTAACTTAGGACATAGGTCGACCTATGGATTATTAGCCAGTGAATGCTTTAGCCGCCCAGCAATATaGATCCACAAAGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TPNLGHRSTYGLLASECFSRPAI*IHKGSL
Trigger: CAGGCTGCCTTTGTGGATTCATATTGCTGGGCGGCT...AAAGCATTCACTGGCTAATAATCCATAGGTCGACCTATGTCCTAAGTTAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp TTGCAAACCAGCTGTGAAACCAACAGGGGTGCTTTAGCCAAATTAAATCCCATGAAGTCTGAGCAAATATaGGGAGCAGCTGCGAAACGC +
Preference number: 4 (lower is better)
Translates to: LQTSCETNRGALAKLNPMKSEQI*GAAAKR
Trigger: GCGTTTCGCAGCTGCTCCTCATATTTGCTCAGACTT...CATGGGATTTAATTTGGCTAAAGCACCCCTGTTGGTTTCACAGCTGGTTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp AATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTACACCTAACTTACCACAATTGGGTACTTaGAGTGGCTTTCAGATACCT +
Preference number: 4 (lower is better)
Translates to: NVKRARVWAKASDLTPNLPQLGT*SGFQIP
Trigger: AGGTATCTGAAAGCCACTTCAAGTACCCAATTGTGG...TAAGTTAGGTGTAAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp CTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTGAAGCCTTTGTGTCTCGGTaGCTCAGGCTCCCAGCGACT +
Preference number: 4 (lower is better)
Translates to: LFQMPLITEKPPVDKLFEAFVSR*LRLPAT
Trigger: AGTCGCTGGGAGCCTGAGGCACCGAGACACAAAGGC...TTCAAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp ATCCTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTGCCTTTGTGTCTCGGTaGCTCAGGCTCCCAGCGACT +
Preference number: 4 (lower is better)
Translates to: ILFQMPLITEKPPVDKLFAFVSR*LRLPAT
Trigger: AGTCGCTGGGAGCCTGAGGCACCGAGACACAAAGGC...AAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp TCTTTATTCTATAATTCTCCACCAGTGCTAGAATTTTCTTCCCAAATGGCCTCACTTTCGCTTTCCCTTTaGCTGCTCCCGCATCCCGCC +
Preference number: 4 (lower is better)
Translates to: SLFYNSPPVLEFSSQMASLSLSL*LLPHPA
Trigger: GGCGGGATGCGGGAGCAGGCAAAGGGAAAGCGAAAG...TGAGGCCATTTGGGAAGAAAATTCTAGCACTGGTGGAGAATTATAGAATAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp AACAAAACAAATCTTCCAAAGTGCTTGTTTTCCAGTAGCTCTGGGTCTTGTCTCACTGATCGGGCACGGTaGTGTCGTTTCTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: NKTNLPKCLFSSSSGSCLTDRAR*CRFSGS
Trigger: GGATCCTGAGAAACGACAGCACCGTGCCCGATCAGT...GAGACAAGACCCAGAGCTACTGGAAAACAAGCACTTTGGAAGATTTGTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp AGCATGCCAATGTCACTTATGTGCCCTGATCACATTCAGGCAAAGTGTTCTTCACTCCTCTCTCATCTCTaGAGACATGGGAGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: SMPMSLMCPDHIQAKCSSLLSHL*RHGSFA
Trigger: GGCAAAACTCCCATGTCTGCAGAGATGAGAGAGGAG...TGAAGAACACTTTGCCTGAATGTGATCAGGGCACATAAGTGACATTGGCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp ACACCTAACTTAGGACATAGGTCGACCTATGGATTATTAGCCAGTGAATGCTTTAGAACACGTACTCCGTaGCCAGTTGAGCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: TPNLGHRSTYGLLASECFRTRTP*PVERWP
Trigger: TGGCCATCGCTCAACTGGCCACGGAGTACGTGTTCT...AAAGCATTCACTGGCTAATAATCCATAGGTCGACCTATGTCCTAAGTTAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp CAAATCTTCCAAAGTGCTTGTTTTCCAGTAGCTCTGGGTCTTGTCTCACCACGGATTGGGTACTTGAAGTaGCTTTCAGATACCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QIFQSACFPVALGLVSPRIGYLK*LSDTSH
Trigger: GTGGGAGGTATCTGAAAGCCACTTCAAGTACCCAAT...CCGTGGTGAGACAAGACCCAGAGCTACTGGAAAACAAGCACTTTGGAAGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp AATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTACACCTAACTTAGTACTGCTCCACAATTaGGTACTTGAAGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: NVKRARVWAKASDLTPNLVLLHN*VLEVAF
Trigger: GAAAGCCACTTCAAGTACCCAATTGTGGAGCAGTAC...TAAGTTAGGTGTAAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp AACAAAACAAATCTTCCAAAGTGCTTGTTTTCCAGTAGCTCTGGGTCTTGTCTCAAGAGAGCTCGAGTGTaGGCCAAGGCATCGGACCTT +
Preference number: 4 (lower is better)
Translates to: NKTNLPKCLFSSSSGSCLKRARV*AKASDL
Trigger: AAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTT...GAGACAAGACCCAGAGCTACTGGAAAACAAGCACTTTGGAAGATTTGTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp ACACCTAACTTAGGACATAGGTCGACCTATGGATTATTAGCCAGTGAATGCTTTTCCACAAAGGCAGCCTaGCGCCAGGAGAAAGAACTT +
Preference number: 4 (lower is better)
Translates to: TPNLGHRSTYGLLASECFSTKAA*RQEKEL
Trigger: AAGTTCTTTCTCCTGGCGTCAGGCTGCCTTTGTGGA...AAAGCATTCACTGGCTAATAATCCATAGGTCGACCTATGTCCTAAGTTAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp ACACCTAACTTAGGACATAGGTCGACCTATGGATTATTAGCCAGTGAATGCTTTAGACTCGCTCTGCAGTaGGTTCTTCTGCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: TPNLGHRSTYGLLASECFRLALQ*VLLLNS
Trigger: GCTGTTCAGCAGAAGAACTCACTGCAGAGCGAGTCT...AAAGCATTCACTGGCTAATAATCCATAGGTCGACCTATGTCCTAAGTTAGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp AAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTACACCTAACTTAGGACATGACACTTGTATGACTTaGCCTCACTTATATTTTCCT +
Preference number: 4 (lower is better)
Translates to: KRARVWAKASDLTPNLGHDTCMT*PHLYFP
Trigger: AGGAAAATATAAGTGAGGTCAAGTCATACAAGTGTC...ATGTCCTAAGTTAGGTGTAAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp GGGTGCTTTAGCCAAATTAAATCCCATGTCGCAGAAGTCACAGATTTACAGCTCGTCACTTATGTGCCCTaGTCACATTCAGGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: GCFSQIKSHVAEVTDLQLVTYVP*SHSGKV
Trigger: CACTTTGCCTGAATGTGATCAGGGCACATAAGTGAC...GAGCTGTAAATCTGTGACTTCTGCGACATGGGATTTAATTTGGCTAAAGCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp GTTCATAAACCATTCTTCCATAACCTTTTGTTGATCACCATTTCCATTAGGGACCCAATCGAGATCTCCTaGGCGAAGGCCAGCGAGATG +
Preference number: 4 (lower is better)
Translates to: VHKPFFHNLLLITISIRDPIEIS*AKASEM
Trigger: CATCTCGCTGGCCTTCGCGCAGGAGATCTCGATTGG...GTCCCTAATGGAAATGGTGATCAACAAAAGGTTATGGAAGAATGGTTTATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp TATAATTCTCCACCAGTGCTAGAATTTTCTTCCCAAATGGCCTCAATTCGGACAAATATGAGGAGCAGCTaGGAAACGCCAGAACAGCGG +
Preference number: 4 (lower is better)
Translates to: YNSPPVLEFSSQMASIRTNMRSS*ETPEQR
Trigger: CCGCTGTTCTGGCGTTTCGCAGCTGCTCCTCATATT...TGTCCGAATTGAGGCCATTTGGGAAGAAAATTCTAGCACTGGTGGAGAATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp ACCATTTCCATTAGGGACTCAATAAGACATGCTCAGTATCTCCACCAAGAACCAGTCACGCGCACTCTTTaGAGCCTTAATTGCACGGTT +
Preference number: 4 (lower is better)
Translates to: TISIRDSIRHAQYLHQEPVTRTL*SLNCTV
Trigger: AACCGTGCAATTAAGGCTGCAAAGAGTGCGCGTGAC...TGGTTCTTGGTGGAGATACTGAGCATGTCTTATTGAGTCCCTAATGGAAATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp CTATCTCTCAGGTGCTTCCTATGGGAAGTTCATAAACCATTCTTCCATAACCTTGGTACAGAAAGGTATTaGTCCGAGGCTCTGACAGGG +
Preference number: 4 (lower is better)
Translates to: LSLRCFLWEVHKPFFHNLGTERY*SEALTG
Trigger: CCCTGTCAGAGCCTCGGAGCAATACCTTTCTGTACC...AAGGTTATGGAAGAATGGTTTATGAACTTCCCATAGGAAGCACCTGAGAGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp CTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTGAAAGCCGCCCAGCAATATaGATCCACAAAGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LFQMPLITEKPPVDKLFESRPAI*IHKGSL
Trigger: CAGGCTGCCTTTGTGGATTCATATTGCTGGGCGGCT...TTCAAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp ACCATTTCCATTAGGGACTCAATAAGACATGCTCAGTATCTCCACCAAGAACCAATTGCAAACCAGCTGTaGAACCAACAGGGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: TISIRDSIRHAQYLHQEPIANQL*NQQGCF
Trigger: AAAGCACCCCTGTTGGTTTCACAGCTGGTTTGCAAT...TGGTTCTTGGTGGAGATACTGAGCATGTCTTATTGAGTCCCTAATGGAAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp GTTCATAAACCATTCTTCCATAACCTTTTGTTGATCACCATTTCCATTAGGGACACTGATCGGGCACGGTaGTGTCGTTTCTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: VHKPFFHNLLLITISIRDTDRAR*CRFSGS
Trigger: GGATCCTGAGAAACGACAGCACCGTGCCCGATCAGT...GTCCCTAATGGAAATGGTGATCAACAAAAGGTTATGGAAGAATGGTTTATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp CAAATCTTCCAAAGTGCTTGTTTTCCAGTAGCTCTGGGTCTTGTCTCACCACGGCCTTCAGATTTGAAATaGAGAACATCAAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: QIFQSACFPVALGLVSPRPSDLK*RTSKVG
Trigger: CCCCACTTTTGATGTTCTGCATTTCAAATCTGAAGG...CCGTGGTGAGACAAGACCCAGAGCTACTGGAAAACAAGCACTTTGGAAGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp AATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTACACCTAACTTACCAAGAACCATTTATTaGAAACCAGCTGTGAAACCA +
Preference number: 4 (lower is better)
Translates to: NVKRARVWAKASDLTPNLPRTIY*KPAVKP
Trigger: TGGTTTCACAGCTGGTTTGCAATAAATGGTTCTTGG...TAAGTTAGGTGTAAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp ACCAGCTGTGAAACCAACAGGGGTGCTTTAGCCAAATTAAATCCCATGTCGCAGCACATAGTTACTTGCTaGAGTTTACTATCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: TSCETNRGALAKLNPMSQHIVTC*SLLSLR
Trigger: CCTGAGAGATAGTAAACTGCAGCAAGTAACTATGTG...CTGCGACATGGGATTTAATTTGGCTAAAGCACCCCTGTTGGTTTCACAGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp GGGTGCTTTAGCCAAATTAAATCCCATGTCGCAGAAGTCACAGATTTACAGCTCCCAATGTCACTTATGTaGCCTGATCACATTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GCFSQIKSHVAEVTDLQLPMSLM*PDHIQA
Trigger: TGCCTGAATGTGATCAGGGCACATAAGTGACATTGG...GAGCTGTAAATCTGTGACTTCTGCGACATGGGATTTAATTTGGCTAAAGCACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp TTGCAAACCAGCTGTGAAACCAACAGGGGTGCTTTAGCCAAATTAAATCCCATGACGCCATATGAAGCATaGCAATGTCACTTATGTGCC +
Preference number: 4 (lower is better)
Translates to: LQTSCETNRGALAKLNPMTPYEA*QCHLCA
Trigger: GGCACATAAGTGACATTGGCATGCTTCATATGGCGT...CATGGGATTTAATTTGGCTAAAGCACCCCTGTTGGTTTCACAGCTGGTTTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp AGCATGCCAATGTCACTTATGTGCCCTGATCACATTCAGGCAAAGTGTTCTTCATGTCTTCTGTCGGAATaGAACAAACAGCGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: SMPMSLMCPDHIQAKCSSCLLSE*NKQRVD
Trigger: GTCTACACGCTGTTTGTTCCATTCCGACAGAAGACA...TGAAGAACACTTTGCCTGAATGTGATCAGGGCACATAAGTGACATTGGCATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp CTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTGAAAAGAGAGCTCGAGTGTaGGCCAAGGCATCGGACCTT +
Preference number: 4 (lower is better)
Translates to: LFQMPLITEKPPVDKLFEKRARV*AKASDL
Trigger: AAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTT...TTCAAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp GTTTACTATCTCTCAGGTGCTTCCTATGGGAAGTTCATAAACCATTCTTCCATAAGTGAGTTCTTCTGCTaGACAGCCGCCCAGCAATAT +
Preference number: 4 (lower is better)
Translates to: VYYLSGASYGKFINHSSISEFFC*TAAQQY
Trigger: ATATTGCTGGGCGGCTGTTCAGCAGAAGAACTCACT...TATGGAAGAATGGTTTATGAACTTCCCATAGGAAGCACCTGAGAGATAGTAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp CTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTGAAGGTAACACCTGGAACTaGGCAGGCTCCATCTCTCAT +
Preference number: 4 (lower is better)
Translates to: LFQMPLITEKPPVDKLFEGNTWN*AGSISH
Trigger: ATGAGAGATGGAGCCTGCTCAGTTCCAGGTGTTACC...TTCAAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp ACACCTAACTTAGGACATAGGTCGACCTATGGATTATTAGCCAGTGAATGCTTTTCAGGATCCCTGATTTaGTGCTGCACACAAACTCGT +
Preference number: 4 (lower is better)
Translates to: TPNLGHRSTYGLLASECFSGSLI*CCTQTR
Trigger: ACGAGTTTGTGTGCAGCATCAAATCAGGGATCCTGA...AAAGCATTCACTGGCTAATAATCCATAGGTCGACCTATGTCCTAAGTTAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp GGGTGCTTTAGCCAAATTAAATCCCATGTCGCAGAAGTCACAGATTTACAGCTCGGATTTCGTACACTTTaGGAACATCTGTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: GCFSQIKSHVAEVTDLQLGFRTL*EHLSSV
Trigger: GACAGAAGACAGATGTTCTCAAAGTGTACGAAATCC...GAGCTGTAAATCTGTGACTTCTGCGACATGGGATTTAATTTGGCTAAAGCACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp AGCATGCCAATGTCACTTATGTGCCCTGATCACATTCAGGCAAAGTGTTCTTCAGGATTTCGTACACTTTaGGAACATCTGTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SMPMSLMCPDHIQAKCSSGFRTL*EHLSSV
Trigger: GACAGAAGACAGATGTTCTCAAAGTGTACGAAATCC...TGAAGAACACTTTGCCTGAATGTGATCAGGGCACATAAGTGACATTGGCATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp ACACCTAACTTAGGACATAGGTCGACCTATGGATTATTAGCCAGTGAATGCTTTATTGCAAACCAGCTGTaGAACCAACAGGGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: TPNLGHRSTYGLLASECFIANQL*NQQGCF
Trigger: AAAGCACCCCTGTTGGTTTCACAGCTGGTTTGCAAT...AAAGCATTCACTGGCTAATAATCCATAGGTCGACCTATGTCCTAAGTTAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp GGGTGCTTTAGCCAAATTAAATCCCATGTCGCAGAAGTCACAGATTTACAGCTCCAGGGCTACTGCTCTTaGCTAATTGTTCTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: GCFSQIKSHVAEVTDLQLQGYCS*LIVLVF
Trigger: AAAGACAAGAACAATTAGTCAAGAGCAGTAGCCCTG...GAGCTGTAAATCTGTGACTTCTGCGACATGGGATTTAATTTGGCTAAAGCACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp TATAATTCTCCACCAGTGCTAGAATTTTCTTCCCAAATGGCCTCAATTCGGACAGTCACTTATGTGCCCTaGTCACATTCAGGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: YNSPPVLEFSSQMASIRTVTYVP*SHSGKV
Trigger: CACTTTGCCTGAATGTGATCAGGGCACATAAGTGAC...TGTCCGAATTGAGGCCATTTGGGAAGAAAATTCTAGCACTGGTGGAGAATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp GTTTACTATCTCTCAGGTGCTTCCTATGGGAAGTTCATAAACCATTCTTCCATAGTCACGCGCACTCTTTaGAGCCTTAATTGCACGGTT +
Preference number: 4 (lower is better)
Translates to: VYYLSGASYGKFINHSSIVTRTL*SLNCTV
Trigger: AACCGTGCAATTAAGGCTGCAAAGAGTGCGCGTGAC...TATGGAAGAATGGTTTATGAACTTCCCATAGGAAGCACCTGAGAGATAGTAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp CTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTGAACTTATGCAGCCACAGTaGGAGGTTTCCAGACTCGCT +
Preference number: 4 (lower is better)
Translates to: LFQMPLITEKPPVDKLFELMQPQ*EVSRLA
Trigger: AGCGAGTCTGGAAACCTCCCACTGTGGCTGCATAAG...TTCAAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp GTTTACTATCTCTCAGGTGCTTCCTATGGGAAGTTCATAAACCATTCTTCCATAATGACACTGAGCAACTaGAAGATGCCCACGGCAATG +
Preference number: 4 (lower is better)
Translates to: VYYLSGASYGKFINHSSIMTLSN*KMPTAM
Trigger: CATTGCCGTGGGCATCTTCCAGTTGCTCAGTGTCAT...TATGGAAGAATGGTTTATGAACTTCCCATAGGAAGCACCTGAGAGATAGTAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp ATCCTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTAAGTCTGAGCAAATATaGGGAGCAGCTGCGAAACGC +
Preference number: 4 (lower is better)
Translates to: ILFQMPLITEKPPVDKLFKSEQI*GAAAKR
Trigger: GCGTTTCGCAGCTGCTCCTCATATTTGCTCAGACTT...AAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp TCTTTATTCTATAATTCTCCACCAGTGCTAGAATTTTCTTCCCAAATGGCCTCAAGAGTGAGGAGAGGCTaGAGTAATAGCCCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: SLFYNSPPVLEFSSQMASRVRRG*SNSPGR
Trigger: TCTACCTGGGCTATTACTTCAGCCTCTCCTCACTCT...TGAGGCCATTTGGGAAGAAAATTCTAGCACTGGTGGAGAATTATAGAATAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp ATCCTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTAGAGTGAGGAGAGGCTaGAGTAATAGCCCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: ILFQMPLITEKPPVDKLFRVRRG*SNSPGR
Trigger: TCTACCTGGGCTATTACTTCAGCCTCTCCTCACTCT...AAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp GGTGCTTTAGCCAAATTAAATCCCATGTCGCAGAAGTCACAGATTTACAGCTCACAACAACATCCATCTTaGTCATGCCAAGGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: GALAKLNPMSQKSQIYSSQQHPS*SCQGLS
Trigger: TGACAAACCTTGGCATGATCAAGATGGATGTTGTTG...TGAGCTGTAAATCTGTGACTTCTGCGACATGGGATTTAATTTGGCTAAAGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp ACCATTTCCATTAGGGACTCAATAAGACATGCTCAGTATCTCCACCAAGAACCACAGGGCTACTGCTCTTaGCTAATTGTTCTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: TISIRDSIRHAQYLHQEPQGYCS*LIVLVF
Trigger: AAAGACAAGAACAATTAGTCAAGAGCAGTAGCCCTG...TGGTTCTTGGTGGAGATACTGAGCATGTCTTATTGAGTCCCTAATGGAAATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp GGGTGCTTTAGCCAAATTAAATCCCATGTCGCAGAAGTCACAGATTTACAGCTCCTTTGCAGCCTTAATTaGACGGTTGTAAACTTTGTC +
Preference number: 4 (lower is better)
Translates to: GCFSQIKSHVAEVTDLQLLCSLN*TVVNFV
Trigger: GACAAAGTTTACAACCGTGCAATTAAGGCTGCAAAG...GAGCTGTAAATCTGTGACTTCTGCGACATGGGATTTAATTTGGCTAAAGCACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp CTATCTCTCAGGTGCTTCCTATGGGAAGTTCATAAACCATTCTTCCATAACCTTACCTCCCACAAACTTTaGCCTAAGTTCTCGGTAACA +
Preference number: 4 (lower is better)
Translates to: LSLRCFLWEVHKPFFHNLTSHKL*PKFSVT
Trigger: TGTTACCGAGAACTTAGGGCAAAGTTTGTGGGAGGT...AAGGTTATGGAAGAATGGTTTATGAACTTCCCATAGGAAGCACCTGAGAGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp ATCCTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTATGACACTGAGCAACTaGAAGATGCCCACGGCAATG +
Preference number: 4 (lower is better)
Translates to: ILFQMPLITEKPPVDKLFMTLSN*KMPTAM
Trigger: CATTGCCGTGGGCATCTTCCAGTTGCTCAGTGTCAT...AAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp ACACCTAACTTAGGACATAGGTCGACCTATGGATTATTAGCCAGTGAATGCTTTTGTCTTCTGTCGGAATaGAACAAACAGCGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: TPNLGHRSTYGLLASECFCLLSE*NKQRVD
Trigger: GTCTACACGCTGTTTGTTCCATTCCGACAGAAGACA...AAAGCATTCACTGGCTAATAATCCATAGGTCGACCTATGTCCTAAGTTAGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp ATCCTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTTCAGGATCCCTGATTTaGTGCTGCACACAAACTCGT +
Preference number: 4 (lower is better)
Translates to: ILFQMPLITEKPPVDKLFSGSLI*CCTQTR
Trigger: ACGAGTTTGTGTGCAGCATCAAATCAGGGATCCTGA...AAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp CTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTGAAAGATGCCCACGGCAATaGGTTTGCACTGAAACTGAT +
Preference number: 4 (lower is better)
Translates to: LFQMPLITEKPPVDKLFERCPRQ*VCTETD
Trigger: ATCAGTTTCAGTGCAAACTCATTGCCGTGGGCATCT...TTCAAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp GGTGCTTTAGCCAAATTAAATCCCATGTCGCAGAAGTCACAGATTTACAGCTCATCCATAACCTTTTGTTaGTCACCATTTCCATTAGGG +
Preference number: 4 (lower is better)
Translates to: GALAKLNPMSQKSQIYSSSITFC*SPFPLG
Trigger: CCCTAATGGAAATGGTGATCAACAAAAGGTTATGGA...TGAGCTGTAAATCTGTGACTTCTGCGACATGGGATTTAATTTGGCTAAAGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp ATCCTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTTCCAAGCACGCCATATaGAGCATGCCAATGTCACTT +
Preference number: 4 (lower is better)
Translates to: ILFQMPLITEKPPVDKLFSKHAI*SMPMSL
Trigger: AAGTGACATTGGCATGCTTCATATGGCGTGCTTGGA...AAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp AACAAAACAAATCTTCCAAAGTGCTTGTTTTCCAGTAGCTCTGGGTCTTGTCTCGGACTCAATAAGACATaGTCAGTATCTCCACCAAGA +
Preference number: 4 (lower is better)
Translates to: NKTNLPKCLFSSSSGSCLGLNKT*SVSPPR
Trigger: TCTTGGTGGAGATACTGAGCATGTCTTATTGAGTCC...GAGACAAGACCCAGAGCTACTGGAAAACAAGCACTTTGGAAGATTTGTTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp GGTGCTTTAGCCAAATTAAATCCCATGTCGCAGAAGTCACAGATTTACAGCTCACACATAGTTACTTGCTaGAGTTTACTATCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GALAKLNPMSQKSQIYSSHIVTC*SLLSLR
Trigger: CCTGAGAGATAGTAAACTGCAGCAAGTAACTATGTG...TGAGCTGTAAATCTGTGACTTCTGCGACATGGGATTTAATTTGGCTAAAGCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp CTATCTCTCAGGTGCTTCCTATGGGAAGTTCATAAACCATTCTTCCATAACCTTTCATCTCTGCAGACATaGGAGTTTTGCCATCAACAA +
Preference number: 4 (lower is better)
Translates to: LSLRCFLWEVHKPFFHNLSSLQT*EFCHQQ
Trigger: TTGTTGATGGCAAAACTCCCATGTCTGCAGAGATGA...AAGGTTATGGAAGAATGGTTTATGAACTTCCCATAGGAAGCACCTGAGAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp GTTCATAAACCATTCTTCCATAACCTTTTGTTGATCACCATTTCCATTAGGGACTCTATGTTCATACCTTaGAGCTCTGCCGTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VHKPFFHNLLLITISIRDSMFIP*SSAVWF
Trigger: GAACCAGACGGCAGAGCTCCAAGGTATGAACATAGA...GTCCCTAATGGAAATGGTGATCAACAAAAGGTTATGGAAGAATGGTTTATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227638.8
CDS-3UTR CCA 90 bp CTATCTCTCAGGTGCTTCCTATGGGAAGTTCATAAACCATTCTTCCATAACCTTCTCAGGTGCTTCCTATaGGAAGTTCATAAACCATTC +
Preference number: 4 (lower is better)
Translates to: LSLRCFLWEVHKPFFHNLLRCFL*EVHKPF
Trigger: GAATGGTTTATGAACTTCCCATAGGAAGCACCTGAG...AAGGTTATGGAAGAATGGTTTATGAACTTCCCATAGGAAGCACCTGAGAGATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp ACACCTAACTTAGGACATAGGTCGACCTATGGATTATTAGCCAGTGAATGCTTTCTCAGGTGCTTCCTATaGGAAGTTCATAAACCATTC +
Preference number: 4 (lower is better)
Translates to: TPNLGHRSTYGLLASECFLRCFL*EVHKPF
Trigger: GAATGGTTTATGAACTTCCCATAGGAAGCACCTGAG...AAAGCATTCACTGGCTAATAATCCATAGGTCGACCTATGTCCTAAGTTAGGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp CTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTGAAACCGCTAAGTTTTTCTaGCTCCAAGCACGCCATATG +
Preference number: 4 (lower is better)
Translates to: LFQMPLITEKPPVDKLFETAKFF*LQARHM
Trigger: CATATGGCGTGCTTGGAGCCAGAAAAACTTAGCGGT...TTCAAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp ATCCTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTCCACAATTGGGTACTTaGAGTGGCTTTCAGATACCT +
Preference number: 4 (lower is better)
Translates to: ILFQMPLITEKPPVDKLFPQLGT*SGFQIP
Trigger: AGGTATCTGAAAGCCACTTCAAGTACCCAATTGTGG...AAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp ATCCTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTGTTTCTCAGGATCCCTaGTTTGATGCTGCACACAAA +
Preference number: 4 (lower is better)
Translates to: ILFQMPLITEKPPVDKLFVSQDP*FDAAHK
Trigger: TTTGTGTGCAGCATCAAATCAGGGATCCTGAGAAAC...AAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp ACCATTTCCATTAGGGACTCAATAAGACATGCTCAGTATCTCCACCAAGAACCATGGATTATTAGCCAGTaGATGCTTTTCTTGTCTAAC +
Preference number: 4 (lower is better)
Translates to: TISIRDSIRHAQYLHQEPWIISQ*MLFLSN
Trigger: GTTAGACAAGAAAAGCATTCACTGGCTAATAATCCA...TGGTTCTTGGTGGAGATACTGAGCATGTCTTATTGAGTCCCTAATGGAAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp TCTTTATTCTATAATTCTCCACCAGTGCTAGAATTTTCTTCCCAAATGGCCTCAACCTCCCACAAACTTTaGCCTAAGTTCTCGGTAACA +
Preference number: 4 (lower is better)
Translates to: SLFYNSPPVLEFSSQMASTSHKL*PKFSVT
Trigger: TGTTACCGAGAACTTAGGGCAAAGTTTGTGGGAGGT...TGAGGCCATTTGGGAAGAAAATTCTAGCACTGGTGGAGAATTATAGAATAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp ACACCTAACTTAGGACATAGGTCGACCTATGGATTATTAGCCAGTGAATGCTTTTTTGTCTTCAAGTACTaGTCCACAATTGGGTACTTG +
Preference number: 4 (lower is better)
Translates to: TPNLGHRSTYGLLASECFFVFKY*STIGYL
Trigger: CAAGTACCCAATTGTGGAGCAGTACTTGAAGACAAA...AAAGCATTCACTGGCTAATAATCCATAGGTCGACCTATGTCCTAAGTTAGGTGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp AACAAAACAAATCTTCCAAAGTGCTTGTTTTCCAGTAGCTCTGGGTCTTGTCTCTTTGTCTTCAAGTACTaGTCCACAATTGGGTACTTG +
Preference number: 4 (lower is better)
Translates to: NKTNLPKCLFSSSSGSCLFVFKY*STIGYL
Trigger: CAAGTACCCAATTGTGGAGCAGTACTTGAAGACAAA...GAGACAAGACCCAGAGCTACTGGAAAACAAGCACTTTGGAAGATTTGTTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp AACAAAACAAATCTTCCAAAGTGCTTGTTTTCCAGTAGCTCTGGGTCTTGTCTCCCAAGAACCATTTATTaGAAACCAGCTGTGAAACCA +
Preference number: 4 (lower is better)
Translates to: NKTNLPKCLFSSSSGSCLPRTIY*KPAVKP
Trigger: TGGTTTCACAGCTGGTTTGCAATAAATGGTTCTTGG...GAGACAAGACCCAGAGCTACTGGAAAACAAGCACTTTGGAAGATTTGTTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp GGTGCTTTAGCCAAATTAAATCCCATGTCGCAGAAGTCACAGATTTACAGCTCAACAAATCTTCCAAAGTaGTTGTTTTCCAGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: GALAKLNPMSQKSQIYSSTNLPK*LFSSSS
Trigger: AGAGCTACTGGAAAACAAGCACTTTGGAAGATTTGT...TGAGCTGTAAATCTGTGACTTCTGCGACATGGGATTTAATTTGGCTAAAGCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp TTGCAAACCAGCTGTGAAACCAACAGGGGTGCTTTAGCCAAATTAAATCCCATGCTTCTCTCCATTATTTaGTTTAGTTTCACTGTCTTG +
Preference number: 4 (lower is better)
Translates to: LQTSCETNRGALAKLNPMLLSII*FSFTVL
Trigger: CAAGACAGTGAAACTAAAGCAAATAATGGAGAGAAG...CATGGGATTTAATTTGGCTAAAGCACCCCTGTTGGTTTCACAGCTGGTTTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436171.2
CDS-3UTR CCA 90 bp TCTTTATTCTATAATTCTCCACCAGTGCTAGAATTTTCTTCCCAAATGGCCTCAGTACTGCTCCACAATTaGGTACTTGAAGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SLFYNSPPVLEFSSQMASVLLHN*VLEVAF
Trigger: GAAAGCCACTTCAAGTACCCAATTGTGGAGCAGTAC...TGAGGCCATTTGGGAAGAAAATTCTAGCACTGGTGGAGAATTATAGAATAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp GTTTACTATCTCTCAGGTGCTTCCTATGGGAAGTTCATAAACCATTCTTCCATATCATCTCTGCAGACATaGGAGTTTTGCCATCAACAA +
Preference number: 4 (lower is better)
Translates to: VYYLSGASYGKFINHSSISSLQT*EFCHQQ
Trigger: TTGTTGATGGCAAAACTCCCATGTCTGCAGAGATGA...TATGGAAGAATGGTTTATGAACTTCCCATAGGAAGCACCTGAGAGATAGTAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp ACACCTAACTTAGGACATAGGTCGACCTATGGATTATTAGCCAGTGAATGCTTTGACACTTGTATGACTTaGCCTCACTTATATTTTCCT +
Preference number: 4 (lower is better)
Translates to: TPNLGHRSTYGLLASECFDTCMT*PHLYFP
Trigger: AGGAAAATATAAGTGAGGTCAAGTCATACAAGTGTC...AAAGCATTCACTGGCTAATAATCCATAGGTCGACCTATGTCCTAAGTTAGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp CTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTGAACAACAACATCCATCTTaGTCATGCCAAGGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: LFQMPLITEKPPVDKLFEQQHPS*SCQGLS
Trigger: TGACAAACCTTGGCATGATCAAGATGGATGTTGTTG...TTCAAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp GTTTACTATCTCTCAGGTGCTTCCTATGGGAAGTTCATAAACCATTCTTCCATACCTTCAGATTTGAAATaGAGAACATCAAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: VYYLSGASYGKFINHSSIPSDLK*RTSKVG
Trigger: CCCCACTTTTGATGTTCTGCATTTCAAATCTGAAGG...TATGGAAGAATGGTTTATGAACTTCCCATAGGAAGCACCTGAGAGATAGTAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp GTTCATAAACCATTCTTCCATAACCTTTTGTTGATCACCATTTCCATTAGGGACGGACTCAATAAGACATaGTCAGTATCTCCACCAAGA +
Preference number: 4 (lower is better)
Translates to: VHKPFFHNLLLITISIRDGLNKT*SVSPPR
Trigger: TCTTGGTGGAGATACTGAGCATGTCTTATTGAGTCC...GTCCCTAATGGAAATGGTGATCAACAAAAGGTTATGGAAGAATGGTTTATGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp ATCCTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTGCAGAACATCAAAAGTaGGGAGGATTTCGTACACTT +
Preference number: 4 (lower is better)
Translates to: ILFQMPLITEKPPVDKLFAEHQK*GGFRTL
Trigger: AAGTGTACGAAATCCTCCCCACTTTTGATGTTCTGC...AAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CCA 90 bp GTTCATAAACCATTCTTCCATAACCTTTTGTTGATCACCATTTCCATTAGGGACGCAGAACATCAAAAGTaGGGAGGATTTCGTACACTT +
Preference number: 4 (lower is better)
Translates to: VHKPFFHNLLLITISIRDAEHQK*GGFRTL
Trigger: AAGTGTACGAAATCCTCCCCACTTTTGATGTTCTGC...GTCCCTAATGGAAATGGTGATCAACAAAAGGTTATGGAAGAATGGTTTATGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR TCA 90 bp CTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTGAATCCATAACCTTTTGTTaGTCACCATTTCCATTAGGG +
Preference number: 4 (lower is better)
Translates to: LFQMPLITEKPPVDKLFESITFC*SPFPLG
Trigger: CCCTAATGGAAATGGTGATCAACAAAAGGTTATGGA...TTCAAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp GTTCATAAACCATTCTTCCATAACCTTTTGTTGATCACCATTTCCATTAGGGACCTTTGCAGCCTTAATTaGACGGTTGTAAACTTTGTC +
Preference number: 4 (lower is better)
Translates to: VHKPFFHNLLLITISIRDLCSLN*TVVNFV
Trigger: GACAAAGTTTACAACCGTGCAATTAAGGCTGCAAAG...GTCCCTAATGGAAATGGTGATCAACAAAAGGTTATGGAAGAATGGTTTATGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp GTTCATAAACCATTCTTCCATAACCTTTTGTTGATCACCATTTCCATTAGGGACTTACTATCTCTCAGGTaGTTCCTATGGGAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: VHKPFFHNLLLITISIRDLLSLR*FLWEVH
Trigger: ATGAACTTCCCATAGGAAGCACCTGAGAGATAGTAA...GTCCCTAATGGAAATGGTGATCAACAAAAGGTTATGGAAGAATGGTTTATGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR GCA 90 bp ATCCTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTTTACTATCTCTCAGGTaGTTCCTATGGGAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: ILFQMPLITEKPPVDKLFLLSLR*FLWEVH
Trigger: ATGAACTTCCCATAGGAAGCACCTGAGAGATAGTAA...AAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CCA 90 bp CACCCCCAGGCGCGGGAACCACGCGCGGAACAAAGCGCTTCCCTCTaGCCCTGCCCCTCCGCGCCGCCCTGGCTGCCGAAGCGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: HPQAREPRAEQSASL*PCPSAPPWLPKRPP
Trigger: CGGCGGCCGCTTCGGCAGCCAGGGCGGCGCGGAGGGGCAGGGCCAGAGGGAAGCGCTTTGTTCCGCGCGTGGTTCCCGCGCCTGGGGGTG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227638.8
CDS GCA 90 bp GGAACCCGAGAGCTCCGCTTCCTGCGGTTCCACCCCGCACGCCCGTaGAAGTCCCCGGGCCGCGCGCGGCACTCGGATTCGCGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: GTRELRFLRFHPARP*KSPGRARHSDSRLS
Trigger: GGAGAGGCGCGAATCCGAGTGCCGCGCGCGGCCCGGGGACTTGCACGGGCGTGCGGGGTGGAACCGCAGGAAGCGGAGCTCTCGGGTTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS GCA 90 bp CCAGGCTCGACCAGGAGGTCCGGGTACAGCCGGCGTCGGGAAAGCTaGGCGGCGCCTTCACCCAGTCACCGGCCGGGCGCGCGGCTTTCG +
Preference number: 5 (lower is better)
Translates to: PGSTRRSGYSRRRES*AAPSPSHRPGARLS
Trigger: CGAAAGCCGCGCGCCCGGCCGGTGACTGGGTGAAGGCGCCGCGCAGCTTTCCCGACGCCGGCTGTACCCGGACCTCCTGGTCGAGCCTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS GCA 90 bp AACAAAGCGCTTCCCTCTGGCCCTGCCCCTCCGCGCCGCCCTGGCTaGCGAAGCGGCCGCCGGGATAGCCCTGCGCTCACAGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: NKALPSGPAPPRRPG*RSGRRDSPALTASC
Trigger: GCAGCTGGCTGTGAGCGCAGGGCTATCCCGGCGGCCGCTTCGGCAGCCAGGGCGGCGCGGAGGGGCAGGGCCAGAGGGAAGCGCTTTGTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227638.8
CDS GCA 90 bp GGCGCGCGGCTTTCGCTTTCCCTTTGCCTGCTCCCGCATCCCGCCTaGCTTTGTGTCTCGGTGCCTCAGGCTCCCAGCGACTCCGCTGGG +
Preference number: 5 (lower is better)
Translates to: GARLSLSLCLLPHPA*LCVSVPQAPSDSAG
Trigger: CCCAGCGGAGTCGCTGGGAGCCTGAGGCACCGAGACACAAAGGCAGGCGGGATGCGGGAGCAGGCAAAGGGAAAGCGAAAGCCGCGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS GCA 90 bp CACCCAGTCACCGGCCGGGCGCGCGGCTTTCGCTTTCCCTTTGCCTaGTCCCGCATCCCGCCTGCCTTTGTGTCTCGGTGCCTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: HPVTGRARGFRFPFA*SRIPPAFVSRCLRL
Trigger: GAGCCTGAGGCACCGAGACACAAAGGCAGGCGGGATGCGGGAGCAGGCAAAGGGAAAGCGAAAGCCGCGCGCCCGGCCGGTGACTGGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS GCA 90 bp TTTCCCTTTGCCTGCTCCCGCATCCCGCCTGCCTTTGTGTCTCGGTaGCTCAGGCTCCCAGCGACTCCGCTGGGCTCTCGCGCTCGCTGC +
Preference number: 5 (lower is better)
Translates to: FPFACSRIPPAFVSR*LRLPATPLGSRARC
Trigger: GCAGCGAGCGCGAGAGCCCAGCGGAGTCGCTGGGAGCCTGAGGCACCGAGACACAAAGGCAGGCGGGATGCGGGAGCAGGCAAAGGGAAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS GCA 90 bp CCTTCACCCAGTCACCGGCCGGGCGCGCGGCTTTCGCTTTCCCTTTaGCTGCTCCCGCATCCCGCCTGCCTTTGTGTCTCGGTGCCTCAG +
Preference number: 5 (lower is better)
Translates to: PSPSHRPGARLSLSL*LLPHPACLCVSVPQ
Trigger: CTGAGGCACCGAGACACAAAGGCAGGCGGGATGCGGGAGCAGGCAAAGGGAAAGCGAAAGCCGCGCGCCCGGCCGGTGACTGGGTGAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS GCA 90 bp ATCCGAGAACACGTACTCCGTGGCCAGTTGAGCGATGGCCATGGCTaGGGCGCGCCAGGCTCGACCAGGAGGTCCGGGTACAGCCGGCGT +
Preference number: 5 (lower is better)
Translates to: IREHVLRGQLSDGHG*GAPGSTRRSGYSRR
Trigger: ACGCCGGCTGTACCCGGACCTCCTGGTCGAGCCTGGCGCGCCGCAGCCATGGCCATCGCTCAACTGGCCACGGAGTACGTGTTCTCGGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CCA 90 bp AGAAATCCGAGAACACGTACTCCGTGGCCAGTTGAGCGATGGCCATaGCTGCGGCGCGCCAGGCTCGACCAGGAGGTCCGGGTACAGCCG +
Preference number: 5 (lower is better)
Translates to: RNPRTRTPWPVERWP*LRRARLDQEVRVQP
Trigger: CGGCTGTACCCGGACCTCCTGGTCGAGCCTGGCGCGCCGCAGCCATGGCCATCGCTCAACTGGCCACGGAGTACGTGTTCTCGGATTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CCA 90 bp GCTCCGTGGGCTCCTTCAGCAAGAAATCCGAGAACACGTACTCCGTaGCCAGTTGAGCGATGGCCATGGCTGCGGCGCGCCAGGCTCGAC +
Preference number: 5 (lower is better)
Translates to: APWAPSARNPRTRTP*PVERWPWLRRARLD
Trigger: GTCGAGCCTGGCGCGCCGCAGCCATGGCCATCGCTCAACTGGCCACGGAGTACGTGTTCTCGGATTTCTTGCTGAAGGAGCCCACGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS TCA 90 bp GGCTCCTTCAGCAAGAAATCCGAGAACACGTACTCCGTGGCCAGTTaGGCGATGGCCATGGCTGCGGCGCGCCAGGCTCGACCAGGAGGT +
Preference number: 5 (lower is better)
Translates to: GSFSKKSENTYSVAS*AMAMAAARQARPGG
Trigger: ACCTCCTGGTCGAGCCTGGCGCGCCGCAGCCATGGCCATCGCTCAACTGGCCACGGAGTACGTGTTCTCGGATTTCTTGCTGAAGGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CCA 90 bp TCAGCAAGAAATCCGAGAACACGTACTCCGTGGCCAGTTGAGCGATaGCCATGGCTGCGGCGCGCCAGGCTCGACCAGGAGGTCCGGGTA +
Preference number: 5 (lower is better)
Translates to: SARNPRTRTPWPVER*PWLRRARLDQEVRV
Trigger: TACCCGGACCTCCTGGTCGAGCCTGGCGCGCCGCAGCCATGGCCATCGCTCAACTGGCCACGGAGTACGTGTTCTCGGATTTCTTGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp AAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTACACCTAACTTAGGACATGTACTCCGTGGCCAGTaGAGCGATGGCCATGGCTGC +
Preference number: 5 (lower is better)
Translates to: KRARVWAKASDLTPNLGHVLRGQ*SDGHGC
Trigger: GCAGCCATGGCCATCGCTCAACTGGCCACGGAGTAC...ATGTCCTAAGTTAGGTGTAAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp TTTCTGGCTCCAAGCACGCCATATGAAGCATGCCAATGTCACTTATGTGCCCTGGCTTTCGCTTTCCCTTaGCCTGCTCCCGCATCCCGC +
Preference number: 5 (lower is better)
Translates to: FLAPSTPYEACQCHLCALAFAFP*PAPASR
Trigger: GCGGGATGCGGGAGCAGGCAAAGGGAAAGCGAAAGC...CAGGGCACATAAGTGACATTGGCATGCTTCATATGGCGTGCTTGGAGCCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp TTGACAACTAACAATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTCGCAGCCCCTTGAACTaGGGCTCCGTGGGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LTTNNVKRARVWAKASDLRSPLN*GSVGSF
Trigger: GAAGGAGCCCACGGAGCCCAAGTTCAAGGGGCTGCG...AAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATTGTTAGTTGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp AATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTACACCTAACTTAGCTTTCGCTTTCCCTTaGCCTGCTCCCGCATCCCGC +
Preference number: 5 (lower is better)
Translates to: NVKRARVWAKASDLTPNLAFAFP*PAPASR
Trigger: GCGGGATGCGGGAGCAGGCAAAGGGAAAGCGAAAGC...TAAGTTAGGTGTAAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp TTGCAAACCAGCTGTGAAACCAACAGGGGTGCTTTAGCCAAATTAAATCCCATGGCATCCCGCCTGCCTTaGTGTCTCGGTGCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: LQTSCETNRGALAKLNPMASRLP*CLGASG
Trigger: GCCTGAGGCACCGAGACACAAAGGCAGGCGGGATGC...CATGGGATTTAATTTGGCTAAAGCACCCCTGTTGGTTTCACAGCTGGTTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp TTGCAAACCAGCTGTGAAACCAACAGGGGTGCTTTAGCCAAATTAAATCCCATGCGCAGCCCCTTGAACTaGGGCTCCGTGGGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LQTSCETNRGALAKLNPMRSPLN*GSVGSF
Trigger: GAAGGAGCCCACGGAGCCCAAGTTCAAGGGGCTGCG...CATGGGATTTAATTTGGCTAAAGCACCCCTGTTGGTTTCACAGCTGGTTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp AAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTACACCTAACTTAGGACATGGGTACAGAAAGGTATaGCTCCGAGGCTCTGACAGG +
Preference number: 5 (lower is better)
Translates to: KRARVWAKASDLTPNLGHGYRKV*LRGSDR
Trigger: CCTGTCAGAGCCTCGGAGCAATACCTTTCTGTACCC...ATGTCCTAAGTTAGGTGTAAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp ACCATTTCCATTAGGGACTCAATAAGACATGCTCAGTATCTCCACCAAGAACCAGCATCCCGCCTGCCTTaGTGTCTCGGTGCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: TISIRDSIRHAQYLHQEPASRLP*CLGASG
Trigger: GCCTGAGGCACCGAGACACAAAGGCAGGCGGGATGC...TGGTTCTTGGTGGAGATACTGAGCATGTCTTATTGAGTCCCTAATGGAAATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS GCA 90 bp ACCTTGGAGCTCTGCCGTCTGGTTCCCCTGCTCCTCTCTCATCTCTaGAGACATGGGAGTTTTGCCATCAACAACATCCATCTTGATCAT +
Preference number: 5 (lower is better)
Translates to: TLELCRLVPLLLSHL*RHGSFAINNIHLDH
Trigger: ATGATCAAGATGGATGTTGTTGATGGCAAAACTCCCATGTCTGCAGAGATGAGAGAGGAGCAGGGGAACCAGACGGCAGAGCTCCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227638.8
CDS GCA 90 bp TCACTGTCTATGTTCATACCTTGGAGCTCTGCCGTCTGGTTCCCCTaGTCCTCTCTCATCTCTGCAGACATGGGAGTTTTGCCATCAACA +
Preference number: 5 (lower is better)
Translates to: SLSMFIPWSSAVWFP*SSLISADMGVLPST
Trigger: TGTTGATGGCAAAACTCCCATGTCTGCAGAGATGAGAGAGGAGCAGGGGAACCAGACGGCAGAGCTCCAAGGTATGAACATAGACAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227638.8
CDS GCA 90 bp GTCTTGGAGCTCTGCCGTCTGGTTCCCCTGCTCCTCTCTCATCTCTaGAGACATGGGAGTTTTGCCATCAACAACATCCATCTTGATCAT +
Preference number: 5 (lower is better)
Translates to: VLELCRLVPLLLSHL*RHGSFAINNIHLDH
Trigger: ATGATCAAGATGGATGTTGTTGATGGCAAAACTCCCATGTCTGCAGAGATGAGAGAGGAGCAGGGGAACCAGACGGCAGAGCTCCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436171.2
CDS-3UTR CAA 90 bp ACCAGCTGTGAAACCAACAGGGGTGCTTTAGCCAAATTAAATCCCATGTCGCAGTTGTCAGGAGTAGCATaGGGTCGATCCCCTGACCAC +
Preference number: 5 (lower is better)
Translates to: TSCETNRGALAKLNPMSQLSGVA*GRSPDH
Trigger: GTGGTCAGGGGATCGACCCAATGCTACTCCTGACAA...CTGCGACATGGGATTTAATTTGGCTAAAGCACCCCTGTTGGTTTCACAGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp CAAATCTTCCAAAGTGCTTGTTTTCCAGTAGCTCTGGGTCTTGTCTCACCACGGGGGTACAGAAAGGTATaGCTCCGAGGCTCTGACAGG +
Preference number: 5 (lower is better)
Translates to: QIFQSACFPVALGLVSPRGYRKV*LRGSDR
Trigger: CCTGTCAGAGCCTCGGAGCAATACCTTTCTGTACCC...CCGTGGTGAGACAAGACCCAGAGCTACTGGAAAACAAGCACTTTGGAAGATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS GCA 90 bp TTTGCTTTAGTTTCACTGTCTTGGAGCTCTGCCGTCTGGTTCCCCTaGTCCTCTCTCATCTCTGCAGACATGGGAGTTTTGCCATCAACA +
Preference number: 5 (lower is better)
Translates to: FALVSLSWSSAVWFP*SSLISADMGVLPST
Trigger: TGTTGATGGCAAAACTCCCATGTCTGCAGAGATGAGAGAGGAGCAGGGGAACCAGACGGCAGAGCTCCAAGACAGTGAAACTAAAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436171.2
CDS CCA 90 bp GGGGAGGATTTCGTACACTTTGAGAACATCTGTCTTCTGTCGGAATaGAACAAACAGCGTGTAGACAACCACGGGAGCCAGCAGGACATA +
Preference number: 5 (lower is better)
Translates to: GEDFVHFENICLLSE*NKQRVDNHGSQQDI
Trigger: TATGTCCTGCTGGCTCCCGTGGTTGTCTACACGCTGTTTGTTCCATTCCGACAGAAGACAGATGTTCTCAAAGTGTACGAAATCCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS TCA 90 bp ACTTTGTCAAGTTCTTCCATGATAAACTTCAAGTCTGAGCAAATATaGGGAGCAGCTGCGAAACGCCAGAACAGCGGGGGCAGGTACAGG +
Preference number: 5 (lower is better)
Translates to: TLSSSSMINFKSEQI*GAAAKRQNSGGRYR
Trigger: CCTGTACCTGCCCCCGCTGTTCTGGCGTTTCGCAGCTGCTCCTCATATTTGCTCAGACTTGAAGTTTATCATGGAAGAACTTGACAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS TCA 90 bp TCATCTCTGCAGACATGGGAGTTTTGCCATCAACAACATCCATCTTaGTCATGCCAAGGTTTGTCAGGAGTAGCATTGGGTCGATCCCCT +
Preference number: 5 (lower is better)
Translates to: SSLQTWEFCHQQHPS*SCQGLSGVALGRSP
Trigger: AGGGGATCGACCCAATGCTACTCCTGACAAACCTTGGCATGATCAAGATGGATGTTGTTGATGGCAAAACTCCCATGTCTGCAGAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp ACCATTTCCATTAGGGACTCAATAAGACATGCTCAGTATCTCCACCAAGAACCATTGTCAGGAGTAGCATaGGGTCGATCCCCTGACCAC +
Preference number: 5 (lower is better)
Translates to: TISIRDSIRHAQYLHQEPLSGVA*GRSPDH
Trigger: GTGGTCAGGGGATCGACCCAATGCTACTCCTGACAA...TGGTTCTTGGTGGAGATACTGAGCATGTCTTATTGAGTCCCTAATGGAAATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp CAAATCTTCCAAAGTGCTTGTTTTCCAGTAGCTCTGGGTCTTGTCTCACCACGGGCAGACATGGGAGTTTaGCCATCAACAACATCCATC +
Preference number: 5 (lower is better)
Translates to: QIFQSACFPVALGLVSPRADMGV*PSTTSI
Trigger: GATGGATGTTGTTGATGGCAAAACTCCCATGTCTGC...CCGTGGTGAGACAAGACCCAGAGCTACTGGAAAACAAGCACTTTGGAAGATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp TTGACAACTAACAATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTTCCACAATTGGGTACTaGAAGTGGCTTTCAGATACC +
Preference number: 5 (lower is better)
Translates to: LTTNNVKRARVWAKASDLSTIGY*KWLSDT
Trigger: GGTATCTGAAAGCCACTTCAAGTACCCAATTGTGGA...AAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATTGTTAGTTGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp AGCATGCCAATGTCACTTATGTGCCCTGATCACATTCAGGCAAAGTGTTCTTCACTCAGGATCCCTGATTaGATGCTGCACACAAACTCG +
Preference number: 5 (lower is better)
Translates to: SMPMSLMCPDHIQAKCSSLRIPD*MLHTNS
Trigger: CGAGTTTGTGTGCAGCATCAAATCAGGGATCCTGAG...TGAAGAACACTTTGCCTGAATGTGATCAGGGCACATAAGTGACATTGGCATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp TTTCTGGCTCCAAGCACGCCATATGAAGCATGCCAATGTCACTTATGTGCCCTGTCAACAACATCCATCTaGATCATGCCAAGGTTTGTC +
Preference number: 5 (lower is better)
Translates to: FLAPSTPYEACQCHLCALSTTSI*IMPRFV
Trigger: GACAAACCTTGGCATGATCAAGATGGATGTTGTTGA...CAGGGCACATAAGTGACATTGGCATGCTTCATATGGCGTGCTTGGAGCCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp ACCATTTCCATTAGGGACTCAATAAGACATGCTCAGTATCTCCACCAAGAACCACTCAGGATCCCTGATTaGATGCTGCACACAAACTCG +
Preference number: 5 (lower is better)
Translates to: TISIRDSIRHAQYLHQEPLRIPD*MLHTNS
Trigger: CGAGTTTGTGTGCAGCATCAAATCAGGGATCCTGAG...TGGTTCTTGGTGGAGATACTGAGCATGTCTTATTGAGTCCCTAATGGAAATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp GGTGCTTTAGCCAAATTAAATCCCATGTCGCAGAAGTCACAGATTTACAGCTCAGTCTATGTTCATACCTaGGAGCTCTGCCGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: GALAKLNPMSQKSQIYSSVYVHT*ELCRLV
Trigger: AACCAGACGGCAGAGCTCCAAGGTATGAACATAGAC...TGAGCTGTAAATCTGTGACTTCTGCGACATGGGATTTAATTTGGCTAAAGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227638.8
CDS-3UTR CAA 90 bp CAAATCTTCCAAAGTGCTTGTTTTCCAGTAGCTCTGGGTCTTGTCTCACCACGGACAGGGCTACTGCTCTaGACTAATTGTTCTTGTCTT +
Preference number: 5 (lower is better)
Translates to: QIFQSACFPVALGLVSPRTGLLL*TNCSCL
Trigger: AAGACAAGAACAATTAGTCAAGAGCAGTAGCCCTGT...CCGTGGTGAGACAAGACCCAGAGCTACTGGAAAACAAGCACTTTGGAAGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS TCA 90 bp TTGATCATGCCAAGGTTTGTCAGGAGTAGCATTGGGTCGATCCCCTaGCCACTGCTCTTAATATTCTCCAGTACCTTAAGACACTTGTAT +
Preference number: 5 (lower is better)
Translates to: LIMPRFVRSSIGSIP*PLLLIFSSTLRHLY
Trigger: ATACAAGTGTCTTAAGGTACTGGAGAATATTAAGAGCAGTGGTCAGGGGATCGACCCAATGCTACTCCTGACAAACCTTGGCATGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp GGGTGCTTTAGCCAAATTAAATCCCATGTCGCAGAAGTCACAGATTTACAGCTCTCCACAATTGGGTACTaGAAGTGGCTTTCAGATACC +
Preference number: 5 (lower is better)
Translates to: GCFSQIKSHVAEVTDLQLSTIGY*KWLSDT
Trigger: GGTATCTGAAAGCCACTTCAAGTACCCAATTGTGGA...GAGCTGTAAATCTGTGACTTCTGCGACATGGGATTTAATTTGGCTAAAGCACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp AATGTAAAGAGAGCTCGAGTGTGGGCCAAGGCATCGGACCTTACACCTAACTTAAGTACCTTAAGACACTaGTATGACTTGACCTCACTT +
Preference number: 5 (lower is better)
Translates to: NVKRARVWAKASDLTPNLSTLRH*YDLTSL
Trigger: AAGTGAGGTCAAGTCATACAAGTGTCTTAAGGTACT...TAAGTTAGGTGTAAGGTCCGATGCCTTGGCCCACACTCGAGCTCTCTTTACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS GCA 90 bp AGAAGAATCCAGAAGTCTCTGTCGGGCATTCTTCTCTCCATTATTTaGTTTAGTTTCACTGTCTATGTTCATACCTTGGAGCTCTGCCGT +
Preference number: 5 (lower is better)
Translates to: RRIQKSLSGILLSII*FSFTVYVHTLELCR
Trigger: ACGGCAGAGCTCCAAGGTATGAACATAGACAGTGAAACTAAAGCAAATAATGGAGAGAAGAATGCCCGACAGAGACTTCTGGATTCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227638.8
CDS-3UTR CAA 90 bp CAAATCTTCCAAAGTGCTTGTTTTCCAGTAGCTCTGGGTCTTGTCTCACCACGGTTCCATAACCTTTTGTaGATCACCATTTCCATTAGG +
Preference number: 5 (lower is better)
Translates to: QIFQSACFPVALGLVSPRFHNLL*ITISIR
Trigger: CCTAATGGAAATGGTGATCAACAAAAGGTTATGGAA...CCGTGGTGAGACAAGACCCAGAGCTACTGGAAAACAAGCACTTTGGAAGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp CTATCTCTCAGGTGCTTCCTATGGGAAGTTCATAAACCATTCTTCCATAACCTTTTTAGTTTCACTGTCTaGGAGCTCTGCCGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: LSLRCFLWEVHKPFFHNLFSFTV*ELCRLV
Trigger: AACCAGACGGCAGAGCTCCAAGACAGTGAAACTAAA...AAGGTTATGGAAGAATGGTTTATGAACTTCCCATAGGAAGCACCTGAGAGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436171.2
CDS GCA 90 bp TCCATCTCTCATGTCAAGGTCACGCGCACTCTTTGCAGCCTTAATTaGACGGTTGTAAACTTTGTCAAGTTCTTCCATGATAAACTTCAA +
Preference number: 5 (lower is better)
Translates to: SISHVKVTRTLCSLN*TVVNFVKFFHDKLQ
Trigger: TTGAAGTTTATCATGGAAGAACTTGACAAAGTTTACAACCGTGCAATTAAGGCTGCAAAGAGTGCGCGTGACCTTGACATGAGAGATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CCA 90 bp TTTTTCTTTGTCTTCAAGTACTGCTCCACAATTGGGTACTTGAAGTaGCTTTCAGATACCTCCCACAAACTTTGCCCTAAGTTCTCGGTA +
Preference number: 5 (lower is better)
Translates to: FFFVFKYCSTIGYLK*LSDTSHKLCPKFSV
Trigger: TACCGAGAACTTAGGGCAAAGTTTGTGGGAGGTATCTGAAAGCCACTTCAAGTACCCAATTGTGGAGCAGTACTTGAAGACAAAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp GGTGCTTTAGCCAAATTAAATCCCATGTCGCAGAAGTCACAGATTTACAGCTCAACAGGGCTACTGCTCTaGACTAATTGTTCTTGTCTT +
Preference number: 5 (lower is better)
Translates to: GALAKLNPMSQKSQIYSSTGLLL*TNCSCL
Trigger: AAGACAAGAACAATTAGTCAAGAGCAGTAGCCCTGT...TGAGCTGTAAATCTGTGACTTCTGCGACATGGGATTTAATTTGGCTAAAGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp ACCATTTCCATTAGGGACTCAATAAGACATGCTCAGTATCTCCACCAAGAACCAAGGATTTCGTACACTTaGAGAACATCTGTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: TISIRDSIRHAQYLHQEPRISYT*RTSVFC
Trigger: ACAGAAGACAGATGTTCTCAAAGTGTACGAAATCCT...TGGTTCTTGGTGGAGATACTGAGCATGTCTTATTGAGTCCCTAATGGAAATGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp CTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTGAAGCAGACATGGGAGTTTaGCCATCAACAACATCCATC +
Preference number: 5 (lower is better)
Translates to: LFQMPLITEKPPVDKLFEADMGV*PSTTSI
Trigger: GATGGATGTTGTTGATGGCAAAACTCCCATGTCTGC...TTCAAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp ACCATTTCCATTAGGGACTCAATAAGACATGCTCAGTATCTCCACCAAGAACCATTCCATCAGCCAAGGTaGACAACTAACAATGTAAAG +
Preference number: 5 (lower is better)
Translates to: TISIRDSIRHAQYLHQEPFHQPR*TTNNVK
Trigger: CTTTACATTGTTAGTTGTCAACCTTGGCTGATGGAA...TGGTTCTTGGTGGAGATACTGAGCATGTCTTATTGAGTCCCTAATGGAAATGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp ACACCTAACTTAGGACATAGGTCGACCTATGGATTATTAGCCAGTGAATGCTTTAGGATTTCGTACACTTaGAGAACATCTGTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: TPNLGHRSTYGLLASECFRISYT*RTSVFC
Trigger: ACAGAAGACAGATGTTCTCAAAGTGTACGAAATCCT...AAAGCATTCACTGGCTAATAATCCATAGGTCGACCTATGTCCTAAGTTAGGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp ATCCTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTTCAACAACATCCATCTaGATCATGCCAAGGTTTGTC +
Preference number: 5 (lower is better)
Translates to: ILFQMPLITEKPPVDKLFSTTSI*IMPRFV
Trigger: GACAAACCTTGGCATGATCAAGATGGATGTTGTTGA...AAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp TATAATTCTCCACCAGTGCTAGAATTTTCTTCCCAAATGGCCTCAATTCGGACATTCCATAACCTTTTGTaGATCACCATTTCCATTAGG +
Preference number: 5 (lower is better)
Translates to: YNSPPVLEFSSQMASIRTFHNLL*ITISIR
Trigger: CCTAATGGAAATGGTGATCAACAAAAGGTTATGGAA...TGTCCGAATTGAGGCCATTTGGGAAGAAAATTCTAGCACTGGTGGAGAATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp ATCCTATTTCAAATGCCTTTGATAACAGAGAAACCGCCTGTAGACAAACTCTTTAGTACCTTAAGACACTaGTATGACTTGACCTCACTT +
Preference number: 5 (lower is better)
Translates to: ILFQMPLITEKPPVDKLFSTLRH*YDLTSL
Trigger: AAGTGAGGTCAAGTCATACAAGTGTCTTAAGGTACT...AAAGAGTTTGTCTACAGGCGGTTTCTCTGTTATCAAAGGCATTTGAAATAGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS-3UTR CAA 90 bp TCTTTATTCTATAATTCTCCACCAGTGCTAGAATTTTCTTCCCAAATGGCCTCATTCCATCAGCCAAGGTaGACAACTAACAATGTAAAG +
Preference number: 5 (lower is better)
Translates to: SLFYNSPPVLEFSSQMASFHQPR*TTNNVK
Trigger: CTTTACATTGTTAGTTGTCAACCTTGGCTGATGGAA...TGAGGCCATTTGGGAAGAAAATTCTAGCACTGGTGGAGAATTATAGAATAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS GCA 72 bp GAGCTCCGCTTCCTGCGGTTCCACCCCGCACGCCCGTaGAAGTCCCCGGGCCGCGCGCGGCACTCGGATTCG +
Preference number: 6 (lower is better)
Translates to: ELRFLRFHPARP*KSPGRARHSDS
Trigger: CGAATCCGAGTGCCGCGCGCGGCCCGGGGACTTGCACGGGCGTGCGGGGTGGAACCGCAGGAAGCGGAGCTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CCA 72 bp TTGTGTCTCGGTGCCTCAGGCTCCCAGCGACTCCGCTaGGCTCTCGCGCTCGCTGCCTCCGCCGCCGGCGGG +
Preference number: 6 (lower is better)
Translates to: LCLGASGSQRLR*ALALAASAAGG
Trigger: CCCGCCGGCGGCGGAGGCAGCGAGCGCGAGAGCCCAGCGGAGTCGCTGGGAGCCTGAGGCACCGAGACACAA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS GCA 72 bp GCCTGCTCCCGCATCCCGCCTGCCTTTGTGTCTCGGTaGCTCAGGCTCCCAGCGACTCCGCTGGGCTCTCGC +
Preference number: 6 (lower is better)
Translates to: ACSRIPPAFVSR*LRLPATPLGSR
Trigger: GCGAGAGCCCAGCGGAGTCGCTGGGAGCCTGAGGCACCGAGACACAAAGGCAGGCGGGATGCGGGAGCAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS GCA 72 bp ACCGGCCGGGCGCGCGGCTTTCGCTTTCCCTTTGCCTaGTCCCGCATCCCGCCTGCCTTTGTGTCTCGGTGC +
Preference number: 6 (lower is better)
Translates to: TGRARGFRFPFA*SRIPPAFVSRC
Trigger: GCACCGAGACACAAAGGCAGGCGGGATGCGGGAGCAGGCAAAGGGAAAGCGAAAGCCGCGCGCCCGGCCGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS GCA 72 bp CACGTACTCCGTGGCCAGTTGAGCGATGGCCATGGCTaGGGCGCGCCAGGCTCGACCAGGAGGTCCGGGTAC +
Preference number: 6 (lower is better)
Translates to: HVLRGQLSDGHG*GAPGSTRRSGY
Trigger: GTACCCGGACCTCCTGGTCGAGCCTGGCGCGCCGCAGCCATGGCCATCGCTCAACTGGCCACGGAGTACGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CAA 90 bp GCCTTCACCCAGTCACCGGCCGGGCGCGCGGCTTTCGCTTTCCCTTaGCCTGCTCCCGCATCCCGCCTGCCTTTGTGTCTCGGTGCCTCA +
Preference number: 6 (lower is better)
Translates to: AFTQSPAGRAAFAFP*PAPASRLPLCLGAS
Trigger: TGAGGCACCGAGACACAAAGGCAGGCGGGATGCGGGAGCAGGCAAAGGGAAAGCGAAAGCCGCGCGCCCGGCCGGTGACTGGGTGAAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS GCA 72 bp AGTCACCGGCCGGGCGCGCGGCTTTCGCTTTCCCTTTaGCTGCTCCCGCATCCCGCCTGCCTTTGTGTCTCG +
Preference number: 6 (lower is better)
Translates to: SHRPGARLSLSL*LLPHPACLCVS
Trigger: CGAGACACAAAGGCAGGCGGGATGCGGGAGCAGGCAAAGGGAAAGCGAAAGCCGCGCGCCCGGCCGGTGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CCA 72 bp AGAACACGTACTCCGTGGCCAGTTGAGCGATGGCCATaGCTGCGGCGCGCCAGGCTCGACCAGGAGGTCCGG +
Preference number: 6 (lower is better)
Translates to: RTRTPWPVERWP*LRRARLDQEVR
Trigger: CCGGACCTCCTGGTCGAGCCTGGCGCGCCGCAGCCATGGCCATCGCTCAACTGGCCACGGAGTACGTGTTCT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CAA 72 bp CAGTCACCGGCCGGGCGCGCGGCTTTCGCTTTCCCTTaGCCTGCTCCCGCATCCCGCCTGCCTTTGTGTCTC +
Preference number: 6 (lower is better)
Translates to: QSPAGRAAFAFP*PAPASRLPLCL
Trigger: GAGACACAAAGGCAGGCGGGATGCGGGAGCAGGCAAAGGGAAAGCGAAAGCCGCGCGCCCGGCCGGTGACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CAA 90 bp GCGGCTTTCGCTTTCCCTTTGCCTGCTCCCGCATCCCGCCTGCCTTaGTGTCTCGGTGCCTCAGGCTCCCAGCGACTCCGCTGGGCTCTC +
Preference number: 6 (lower is better)
Translates to: AAFAFPLPAPASRLP*CLGASGSQRLRWAL
Trigger: GAGAGCCCAGCGGAGTCGCTGGGAGCCTGAGGCACCGAGACACAAAGGCAGGCGGGATGCGGGAGCAGGCAAAGGGAAAGCGAAAGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CAA 72 bp GCTTTCCCTTTGCCTGCTCCCGCATCCCGCCTGCCTTaGTGTCTCGGTGCCTCAGGCTCCCAGCGACTCCGC +
Preference number: 6 (lower is better)
Translates to: AFPLPAPASRLP*CLGASGSQRLR
Trigger: GCGGAGTCGCTGGGAGCCTGAGGCACCGAGACACAAAGGCAGGCGGGATGCGGGAGCAGGCAAAGGGAAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CCA 72 bp AATCCGAGAACACGTACTCCGTGGCCAGTTGAGCGATaGCCATGGCTGCGGCGCGCCAGGCTCGACCAGGAG +
Preference number: 6 (lower is better)
Translates to: NPRTRTPWPVER*PWLRRARLDQE
Trigger: CTCCTGGTCGAGCCTGGCGCGCCGCAGCCATGGCCATCGCTCAACTGGCCACGGAGTACGTGTTCTCGGATT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CAA 90 bp GGGCTCCTTCAGCAAGAAATCCGAGAACACGTACTCCGTGGCCAGTaGAGCGATGGCCATGGCTGCGGCGCGCCAGGCTCGACCAGGAGG +
Preference number: 6 (lower is better)
Translates to: GLLQQEIREHVLRGQ*SDGHGCGAPGSTRR
Trigger: CCTCCTGGTCGAGCCTGGCGCGCCGCAGCCATGGCCATCGCTCAACTGGCCACGGAGTACGTGTTCTCGGATTTCTTGCTGAAGGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CAA 72 bp CAGCAAGAAATCCGAGAACACGTACTCCGTGGCCAGTaGAGCGATGGCCATGGCTGCGGCGCGCCAGGCTCG +
Preference number: 6 (lower is better)
Translates to: QQEIREHVLRGQ*SDGHGCGAPGS
Trigger: CGAGCCTGGCGCGCCGCAGCCATGGCCATCGCTCAACTGGCCACGGAGTACGTGTTCTCGGATTTCTTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS TCA 72 bp AGCAAGAAATCCGAGAACACGTACTCCGTGGCCAGTTaGGCGATGGCCATGGCTGCGGCGCGCCAGGCTCGA +
Preference number: 6 (lower is better)
Translates to: SKKSENTYSVAS*AMAMAAARQAR
Trigger: TCGAGCCTGGCGCGCCGCAGCCATGGCCATCGCTCAACTGGCCACGGAGTACGTGTTCTCGGATTTCTTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CCA 72 bp GCTCCTTCAGCAAGAAATCCGAGAACACGTACTCCGTaGCCAGTTGAGCGATGGCCATGGCTGCGGCGCGCC +
Preference number: 6 (lower is better)
Translates to: APSARNPRTRTP*PVERWPWLRRA
Trigger: GGCGCGCCGCAGCCATGGCCATCGCTCAACTGGCCACGGAGTACGTGTTCTCGGATTTCTTGCTGAAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CAA 72 bp TTGTCCACAGCCAGCTCCAGTCGCAGCCCCTTGAACTaGGGCTCCGTGGGCTCCTTCAGCAAGAAATCCGAG +
Preference number: 6 (lower is better)
Translates to: LSTASSSRSPLN*GSVGSFSKKSE
Trigger: CTCGGATTTCTTGCTGAAGGAGCCCACGGAGCCCAAGTTCAAGGGGCTGCGACTGGAGCTGGCTGTGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS TCA 72 bp CGGGCACGGTGCTGTCGTTTCTCAGGATCCCTGATTTaGTGCTGCACACAAACTCGTCTGAGAGTGAGGAGA +
Preference number: 6 (lower is better)
Translates to: RARCCRFSGSLI*CCTQTRLRVRR
Trigger: TCTCCTCACTCTCAGACGAGTTTGTGTGCAGCATCAAATCAGGGATCCTGAGAAACGACAGCACCGTGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS GCA 72 bp GTTTCACTGTCTTGGAGCTCTGCCGTCTGGTTCCCCTaGTCCTCTCTCATCTCTGCAGACATGGGAGTTTTG +
Preference number: 6 (lower is better)
Translates to: VSLSWSSAVWFP*SSLISADMGVL
Trigger: CAAAACTCCCATGTCTGCAGAGATGAGAGAGGAGCAGGGGAACCAGACGGCAGAGCTCCAAGACAGTGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436171.2
CDS CAA 72 bp TCGGGCACGGTGCTGTCGTTTCTCAGGATCCCTGATTaGATGCTGCACACAAACTCGTCTGAGAGTGAGGAG +
Preference number: 6 (lower is better)
Translates to: SGTVLSFLRIPD*MLHTNSSESEE
Trigger: CTCCTCACTCTCAGACGAGTTTGTGTGCAGCATCAAATCAGGGATCCTGAGAAACGACAGCACCGTGCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS GCA 72 bp CTCTGCCGTCTGGTTCCCCTGCTCCTCTCTCATCTCTaGAGACATGGGAGTTTTGCCATCAACAACATCCAT +
Preference number: 6 (lower is better)
Translates to: LCRLVPLLLSHL*RHGSFAINNIH
Trigger: ATGGATGTTGTTGATGGCAAAACTCCCATGTCTGCAGAGATGAGAGAGGAGCAGGGGAACCAGACGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS GCA 72 bp ATGTTCATACCTTGGAGCTCTGCCGTCTGGTTCCCCTaGTCCTCTCTCATCTCTGCAGACATGGGAGTTTTG +
Preference number: 6 (lower is better)
Translates to: MFIPWSSAVWFP*SSLISADMGVL
Trigger: CAAAACTCCCATGTCTGCAGAGATGAGAGAGGAGCAGGGGAACCAGACGGCAGAGCTCCAAGGTATGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227638.8
CDS TCA 72 bp ACAGCCGCCCAGCAATATGAATCCACAAAGGCAGCCTaGCGCCAGGAGAAAGAACTTGGAGAGAAACAGCTT +
Preference number: 6 (lower is better)
Translates to: TAAQQYESTKAA*RQEKELGEKQL
Trigger: AAGCTGTTTCTCTCCAAGTTCTTTCTCCTGGCGTCAGGCTGCCTTTGTGGATTCATATTGCTGGGCGGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS TCA 72 bp AGGTTTCCAGACTCGCTCTGCAGTGAGTTCTTCTGCTaGACAGCCGCCCAGCAATATGAATCCACAAAGGCA +
Preference number: 6 (lower is better)
Translates to: RFPDSLCSEFFC*TAAQQYESTKA
Trigger: TGCCTTTGTGGATTCATATTGCTGGGCGGCTGTTCAGCAGAAGAACTCACTGCAGAGCGAGTCTGGAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS TCA 72 bp AGTTCTTCCATGATAAACTTCAAGTCTGAGCAAATATaGGGAGCAGCTGCGAAACGCCAGAACAGCGGGGGC +
Preference number: 6 (lower is better)
Translates to: SSSMINFKSEQI*GAAAKRQNSGG
Trigger: GCCCCCGCTGTTCTGGCGTTTCGCAGCTGCTCCTCATATTTGCTCAGACTTGAAGTTTATCATGGAAGAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CAA 90 bp CTCATCTCTGCAGACATGGGAGTTTTGCCATCAACAACATCCATCTaGATCATGCCAAGGTTTGTCAGGAGTAGCATTGGGTCGATCCCC +
Preference number: 6 (lower is better)
Translates to: LISADMGVLPSTTSI*IMPRFVRSSIGSIP
Trigger: GGGGATCGACCCAATGCTACTCCTGACAAACCTTGGCATGATCAAGATGGATGTTGTTGATGGCAAAACTCCCATGTCTGCAGAGATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS TCA 72 bp TGCTGCACACAAACTCGTCTGAGAGTGAGGAGAGGCTaGAGTAATAGCCCAGGTAGATACACGCTAACAGTA +
Preference number: 6 (lower is better)
Translates to: CCTQTRLRVRRG*SNSPGRYTLTV
Trigger: TACTGTTAGCGTGTATCTACCTGGGCTATTACTTCAGCCTCTCCTCACTCTCAGACGAGTTTGTGTGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS GCA 72 bp GGCTCCATCTCTCATGTCAAGGTCACGCGCACTCTTTaGAGCCTTAATTGCACGGTTGTAAACTTTGTCAAG +
Preference number: 6 (lower is better)
Translates to: GSISHVKVTRTL*SLNCTVVNFVK
Trigger: CTTGACAAAGTTTACAACCGTGCAATTAAGGCTGCAAAGAGTGCGCGTGACCTTGACATGAGAGATGGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CCA 72 bp TTCGTACACTTTGAGAACATCTGTCTTCTGTCGGAATaGAACAAACAGCGTGTAGACAACCACGGGAGCCAG +
Preference number: 6 (lower is better)
Translates to: FVHFENICLLSE*NKQRVDNHGSQ
Trigger: CTGGCTCCCGTGGTTGTCTACACGCTGTTTGTTCCATTCCGACAGAAGACAGATGTTCTCAAAGTGTACGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CAA 90 bp AGCAATATGAATCCACAAAGGCAGCCTGACGCCAGGAGAAAGAACTaGGAGAGAAACAGCTTATCTGTGTACCAATCGAGATCTCCTGCG +
Preference number: 6 (lower is better)
Translates to: SNMNPQRQPDARRKN*ERNSLSVYQSRSPA
Trigger: CGCAGGAGATCTCGATTGGTACACAGATAAGCTGTTTCTCTCCAAGTTCTTTCTCCTGGCGTCAGGCTGCCTTTGTGGATTCATATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS TCA 72 bp CCAAGGTTTGTCAGGAGTAGCATTGGGTCGATCCCCTaGCCACTGCTCTTAATATTCTCCAGTACCTTAAGA +
Preference number: 6 (lower is better)
Translates to: PRFVRSSIGSIP*PLLLIFSSTLR
Trigger: TCTTAAGGTACTGGAGAATATTAAGAGCAGTGGTCAGGGGATCGACCCAATGCTACTCCTGACAAACCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CAA 72 bp GCAGACATGGGAGTTTTGCCATCAACAACATCCATCTaGATCATGCCAAGGTTTGTCAGGAGTAGCATTGGG +
Preference number: 6 (lower is better)
Translates to: ADMGVLPSTTSI*IMPRFVRSSIG
Trigger: CCCAATGCTACTCCTGACAAACCTTGGCATGATCAAGATGGATGTTGTTGATGGCAAAACTCCCATGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS TCA 72 bp CAGACATGGGAGTTTTGCCATCAACAACATCCATCTTaGTCATGCCAAGGTTTGTCAGGAGTAGCATTGGGT +
Preference number: 6 (lower is better)
Translates to: QTWEFCHQQHPS*SCQGLSGVALG
Trigger: ACCCAATGCTACTCCTGACAAACCTTGGCATGATCAAGATGGATGTTGTTGATGGCAAAACTCCCATGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CCA 72 bp GTCTTCAAGTACTGCTCCACAATTGGGTACTTGAAGTaGCTTTCAGATACCTCCCACAAACTTTGCCCTAAG +
Preference number: 6 (lower is better)
Translates to: VFKYCSTIGYLK*LSDTSHKLCPK
Trigger: CTTAGGGCAAAGTTTGTGGGAGGTATCTGAAAGCCACTTCAAGTACCCAATTGTGGAGCAGTACTTGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS GCA 72 bp CATGTCAAGGTCACGCGCACTCTTTGCAGCCTTAATTaGACGGTTGTAAACTTTGTCAAGTTCTTCCATGAT +
Preference number: 6 (lower is better)
Translates to: HVKVTRTLCSLN*TVVNFVKFFHD
Trigger: ATCATGGAAGAACTTGACAAAGTTTACAACCGTGCAATTAAGGCTGCAAAGAGTGCGCGTGACCTTGACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CAA 72 bp TTCTTTGTCTTCAAGTACTGCTCCACAATTGGGTACTaGAAGTGGCTTTCAGATACCTCCCACAAACTTTGC +
Preference number: 6 (lower is better)
Translates to: FFVFKYCSTIGY*KWLSDTSHKLC
Trigger: GCAAAGTTTGTGGGAGGTATCTGAAAGCCACTTCAAGTACCCAATTGTGGAGCAGTACTTGAAGACAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS TCA 72 bp GATTGTAGAGGCTCAAATCGTTGTACCCTTCAGATTTaGAATGCAGAACATCAAAAGTGGGGAGGATTTCGT +
Preference number: 6 (lower is better)
Translates to: DCRGSNRCTLQI*NAEHQKWGGFR
Trigger: ACGAAATCCTCCCCACTTTTGATGTTCTGCATTTCAAATCTGAAGGGTACAACGATTTGAGCCTCTACAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CAA 90 bp TTAGAATTTTTCTTTGTCTTCAAGTACTGCTCCACAATTGGGTACTaGAAGTGGCTTTCAGATACCTCCCACAAACTTTGCCCTAAGTTC +
Preference number: 6 (lower is better)
Translates to: LEFFFVFKYCSTIGY*KWLSDTSHKLCPKF
Trigger: GAACTTAGGGCAAAGTTTGTGGGAGGTATCTGAAAGCCACTTCAAGTACCCAATTGTGGAGCAGTACTTGAAGACAAAGAAAAATTCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CCA 72 bp AGAATTTTTCTTTGTCTTCAAGTACTGCTCCACAATTaGGTACTTGAAGTGGCTTTCAGATACCTCCCACAA +
Preference number: 6 (lower is better)
Translates to: RIFLCLQVLLHN*VLEVAFRYLPQ
Trigger: TTGTGGGAGGTATCTGAAAGCCACTTCAAGTACCCAATTGTGGAGCAGTACTTGAAGACAAAGAAAAATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2
CDS CAA 72 bp CCACTGCTCTTAATATTCTCCAGTACCTTAAGACACTaGTATGACTTGACCTCACTTATATTTTCCTCCAAG +
Preference number: 6 (lower is better)
Translates to: PLLLIFSSTLRH*YDLTSLIFSSK
Trigger: CTTGGAGGAAAATATAAGTGAGGTCAAGTCATACAAGTGTCTTAAGGTACTGGAGAATATTAAGAGCAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227638.8
ENST00000436171.2