Pregenerated sensors for PANTR1 (Homo sapiens)
Ensembl gene IDs: ENSG00000233639Ensembl transcript IDs: ENST00000413121.5, ENST00000443988.5, ENST00000447876.5, ENST00000454729.1, ENST00000458253.5, ENST00000653760.1, ENST00000659645.1, ENST00000661120.1, ENST00000664478.1, ENST00000665955.1
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GACGGCCGGCGTGGCGTCGCAAGTCCGCTTTCCAGTCTCAGCGGCTaGAGGAGGCCTCGGGGCGGCAGGGGGAGTTTGCCTCCCGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: DGRRGVASPLSSLSG*RRPRGGRGSLPPGW Trigger: CCAGCCGGGAGGCAAACTCCCCCTGCCGCCCCGAGGCCTCCTCCAGCCGCTGAGACTGGAAAGCGGACTTGCGACGCCACGCCGGCCGTC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000659645.1 ENST00000664478.1 |
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| CDS CCA 90 bp | GGACCGGGACGGTGTTGTCACACTTGTCACCAACGACGGCCGGCGTaGCGTCGCAAGTCCGCTTTCCAGTCTCAGCGGCTGGAGGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: GPGRCCHTCHQRRPA*RRKSAFQSQRLEEA Trigger: GGCCTCCTCCAGCCGCTGAGACTGGAAAGCGGACTTGCGACGCCACGCCGGCCGTCGTTGGTGACAAGTGTGACAACACCGTCCCGGTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659645.1 ENST00000664478.1 |
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| CDS CCA 90 bp | AGGGACGAAGGTGGATGGATCGAGAGCCTTGTTTCCCTGCTGGGATaGCCGAATGTACCAGAAGTCTCGCTGGCGAGCAGCGCCCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: RDEGGWIESLVSLLG*PNVPEVSLASSALG Trigger: GCCGAGGGCGCTGCTCGCCAGCGAGACTTCTGGTACATTCGGCCATCCCAGCAGGGAAACAAGGCTCTCGATCCATCCACCTTCGTCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS TCA 90 bp | TCTCCTGGCAGAGCCGCGGGAGGCGTCGGAAAGTTTCCTACCACTTaGGGGACGAAGGTGGATGGATCGAGAGCCTTGTTTCCCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SPGRAAGGVGKFPTT*GTKVDGSRALFPCW Trigger: CCAGCAGGGAAACAAGGCTCTCGATCCATCCACCTTCGTCCCTCAAGTGGTAGGAAACTTTCCGACGCCTCCCGCGGCTCTGCCAGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS GCA 90 bp | GTTGGGGGTGGAGGGGAAGGCATATTCTCAACTCTCCAGCACCGATaGGTCCTTAGCCTTCCCTTCACACTGACGCCTCGAAGCCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: VGGGGEGIFSTLQHR*VLSLPFTLTPRSPA Trigger: AGCTGGGCTTCGAGGCGTCAGTGTGAAGGGAAGGCTAAGGACGCATCGGTGCTGGAGAGTTGAGAATATGCCTTCCCCTCCACCCCCAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454729.1 |
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| CDS CCA 90 bp | ACTCACAGCCAAATAAGAGCACGAGGTGGACTAGGAATGTACAGGTaGCCCCGTGAGCACAGAGCAAGTGCTGGGCTGACAGGGGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: THSQIRARGGLGMYR*PREHRASAGLTGAG Trigger: TCCTGCCCCTGTCAGCCCAGCACTTGCTCTGTGCTCACGGGGCCACCTGTACATTCCTAGTCCACCTCGTGCTCTTATTTGGCTGTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS TCA 90 bp | GATTCCCAACACTGGGGCGCTCTGATTCTCAATATTGGAGTGGGCTaGGTCCCTCCCAAAAAGAAGGCAATTGTGTTACCCTCAGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: DSQHWGALILNIGVG*VPPKKKAIVLPSGH Trigger: ATGGCCTGAGGGTAACACAATTGCCTTCTTTTTGGGAGGGACTCAGCCCACTCCAATATTGAGAATCAGAGCGCCCCAGTGTTGGGAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS GCA 90 bp | CTCTGTTATCTAATATTGAACAACTCTCCCGGGCTGAGTAGCATTTaGACCTCCATTCACGGCACCTGGCTCTGGGGTCCAGGATGGAAT | + |
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Preference number: 5 (lower is better) Translates to: LCYLILNNSPGLSSI*TSIHGTWLWGPGWN Trigger: ATTCCATCCTGGACCCCAGAGCCAGGTGCCGTGAATGGAGGTGCAAATGCTACTCAGCCCGGGAGAGTTGTTCAATATTAGATAACAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653760.1 ENST00000665955.1 |
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| CDS CCA 90 bp | CCCGGGCTGAGTAGCATTTGCACCTCCATTCACGGCACCTGGCTCTaGGGTCCAGGATGGAATATTGAAATAGGCTATTGTTTTAATCCC | + |
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Preference number: 5 (lower is better) Translates to: PGLSSICTSIHGTWL*GPGWNIEIGYCFNP Trigger: GGGATTAAAACAATAGCCTATTTCAATATTCCATCCTGGACCCCAGAGCCAGGTGCCGTGAATGGAGGTGCAAATGCTACTCAGCCCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653760.1 ENST00000665955.1 |
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| CDS CCA 90 bp | GGTGCCATCTATGAAGCCCTACCAGACACCAAATCTGCTGACGCCTaGATCTTGGACTCCCCATCCTCCAGAACTACCAGCGATATATTT | + |
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Preference number: 5 (lower is better) Translates to: GAIYEALPDTKSADA*ILDSPSSRTTSDIF Trigger: AAATATATCGCTGGTAGTTCTGGAGGATGGGGAGTCCAAGATCCAGGCGTCAGCAGATTTGGTGTCTGGTAGGGCTTCATAGATGGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS TCA 90 bp | CAAATACCTGACAGGATCGTATTAAGAGGTAGGGCCTTTGGGAAGTaGTTCAGTCATGGGGGCTCCACCATAATGAGTAGGACTGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: QIPDRIVLRGRAFGK*FSHGGSTIMSRTGA Trigger: GGCACCAGTCCTACTCATTATGGTGGAGCCCCCATGACTGAATCACTTCCCAAAGGCCCTACCTCTTAATACGATCCTGTCAGGTATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CCA 90 bp | AACTCTCCCGGGCTGAGTAGCATTTGCACCTCCATTCACGGCACCTaGCTCTGGGGTCCAGGATGGAATATTGAAATAGGCTATTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: NSPGLSSICTSIHGT*LWGPGWNIEIGYCF Trigger: AAAACAATAGCCTATTTCAATATTCCATCCTGGACCCCAGAGCCAGGTGCCGTGAATGGAGGTGCAAATGCTACTCAGCCCGGGAGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653760.1 ENST00000665955.1 |
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| CDS CCA 90 bp | GAGACAGGAGAGCAGACTGAAGAGGTGAGCAAGAGCCAGGTGCTATaGTCTGAATGCTGGTATCCTTCCAAAACTCACGTTGGAACCAAA | + |
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Preference number: 5 (lower is better) Translates to: ETGEQTEEVSKSQVL*SECWYPSKTHVGTK Trigger: TTTGGTTCCAACGTGAGTTTTGGAAGGATACCAGCATTCAGACCATAGCACCTGGCTCTTGCTCACCTCTTCAGTCTGCTCTCCTGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CCA 90 bp | CCAAGCAGCCCAGCTGGGTGGAGGGCAAGGTTACCTAGCCTGAGCTaGCTGTTAAAGAATGGATTATCCAGAAGGATATGGATAGTCTAT | + |
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Preference number: 5 (lower is better) Translates to: PSSPAGWRARLPSLS*LLKNGLSRRIWIVY Trigger: ATAGACTATCCATATCCTTCTGGATAATCCATTCTTTAACAGCCAGCTCAGGCTAGGTAACCTTGCCCTCCACCCAGCTGGGCTGCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS GCA 90 bp | AGAACATGGTTGCTGCCTTCAGGGCGCAGGCAATGGAGGTTCCCTTaGTTTAGAACGTACAATGATGGTGAATTGTGTGGCTTATCAGCA | + |
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Preference number: 5 (lower is better) Translates to: RTWLLPSGRRQWRFP*FRTYNDGELCGLSA Trigger: TGCTGATAAGCCACACAATTCACCATCATTGTACGTTCTAAAGCAAGGGAACCTCCATTGCCTGCGCCCTGAAGGCAGCAACCATGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS GCA 90 bp | GAGCAGACTGAAGAGGTGAGCAAGAGCCAGGTGCTATGGTCTGAATaGTGGTATCCTTCCAAAACTCACGTTGGAACCAAATACCTGACA | + |
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Preference number: 5 (lower is better) Translates to: EQTEEVSKSQVLWSE*WYPSKTHVGTKYLT Trigger: TGTCAGGTATTTGGTTCCAACGTGAGTTTTGGAAGGATACCAGCATTCAGACCATAGCACCTGGCTCTTGCTCACCTCTTCAGTCTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CCA 90 bp | ACCAAGCATCACAGAACATGGTTGCTGCCTTCAGGGCGCAGGCAATaGAGGTTCCCTTGCTTTAGAACGTACAATGATGGTGAATTGTGT | + |
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Preference number: 5 (lower is better) Translates to: TKHHRTWLLPSGRRQ*RFPCFRTYNDGELC Trigger: ACACAATTCACCATCATTGTACGTTCTAAAGCAAGGGAACCTCCATTGCCTGCGCCCTGAAGGCAGCAACCATGTTCTGTGATGCTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS CCA 90 bp | CAGACTGAAGAGGTGAGCAAGAGCCAGGTGCTATGGTCTGAATGCTaGTATCCTTCCAAAACTCACGTTGGAACCAAATACCTGACAGGA | + |
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Preference number: 5 (lower is better) Translates to: QTEEVSKSQVLWSEC*YPSKTHVGTKYLTG Trigger: TCCTGTCAGGTATTTGGTTCCAACGTGAGTTTTGGAAGGATACCAGCATTCAGACCATAGCACCTGGCTCTTGCTCACCTCTTCAGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CCA 90 bp | TCTATGAAGCCCTACCAGACACCAAATCTGCTGACGCCTGGATCTTaGACTCCCCATCCTCCAGAACTACCAGCGATATATTTCTATTGT | + |
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Preference number: 5 (lower is better) Translates to: SMKPYQTPNLLTPGS*TPHPPELPAIYFYC Trigger: ACAATAGAAATATATCGCTGGTAGTTCTGGAGGATGGGGAGTCCAAGATCCAGGCGTCAGCAGATTTGGTGTCTGGTAGGGCTTCATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CCA 90 bp | AACTTGAACAGAGGAGCAAAACTCCTTGACCGGATGTCATCCATCTaGGGCTTCCAGAAGGAAACTGATAAGTCTATATACCACCCGCTA | + |
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Preference number: 5 (lower is better) Translates to: NLNRGAKLLDRMSSI*GFQKETDKSIYHPL Trigger: TAGCGGGTGGTATATAGACTTATCAGTTTCCTTCTGGAAGCCCCAGATGGATGACATCCGGTCAAGGAGTTTTGCTCCTCTGTTCAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS GCA 90 bp | TTAAAACCAGACCCGAGGTCTTTGTGCCATGCTCGGCATATCAAGTaGCCCTCTTCAAATTGTACTGAGCTAGCGGTATACCTTAATAAA | + |
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Preference number: 5 (lower is better) Translates to: LKPDPRSLCHARHIK*PSSNCTELAVYLNK Trigger: TTTATTAAGGTATACCGCTAGCTCAGTACAATTTGAAGAGGGGCACTTGATATGCCGAGCATGGCACAAAGACCTCGGGTCTGGTTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS TCA 90 bp | TCCTGGGAGGCAGTTAGAGGATGTGGTCACTCCAGAATAATTTATTaGGTCACATACTTCTGCTATTTGCAGTTTTCCATATGTGGAACC | + |
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Preference number: 5 (lower is better) Translates to: SWEAVRGCGHSRIIY*VTYFCYLQFSICGT Trigger: GGTTCCACATATGGAAAACTGCAAATAGCAGAAGTATGTGACTCAATAAATTATTCTGGAGTGACCACATCCTCTAACTGCCTCCCAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000413121.5 ENST00000443988.5 ENST00000447876.5 ENST00000454729.1 ENST00000458253.5 ENST00000653760.1 ENST00000661120.1 ENST00000664478.1 ENST00000665955.1 |
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| CDS TCA 90 bp | AAAAAGGTTTCTCAACTGATGAGCCTTGATTATGGGTTCCAGGATTaGGATGCAGTAACAAATTTCAGCCTTGGGCACATGAACATACTG | + |
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Preference number: 5 (lower is better) Translates to: KKVSQLMSLDYGFQD*DAVTNFSLGHMNIL Trigger: CAGTATGTTCATGTGCCCAAGGCTGAAATTTGTTACTGCATCTCAATCCTGGAACCCATAATCAAGGCTCATCAGTTGAGAAACCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS GCA 90 bp | ATTCCCCCAGAGTATAACTCAAATGCACGTGAAATTTCTCAGTACTaGTTCCGAGGGGAGCTAACTAATAAGTACCATCAGGTAACAAAA | + |
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Preference number: 5 (lower is better) Translates to: IPPEYNSNAREISQY*FRGELTNKYHQVTK Trigger: TTTTGTTACCTGATGGTACTTATTAGTTAGCTCCCCTCGGAAGCAGTACTGAGAAATTTCACGTGCATTTGAGTTATACTCTGGGGGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS TCA 90 bp | GAACACTTGTCATATGTCCAAAAAGGTTTCTCAACTGATGAGCCTTaGTTATGGGTTCCAGGATTGAGATGCAGTAACAAATTTCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: EHLSYVQKGFSTDEP*LWVPGLRCSNKFQP Trigger: AGGCTGAAATTTGTTACTGCATCTCAATCCTGGAACCCATAATCAAGGCTCATCAGTTGAGAAACCTTTTTGGACATATGACAAGTGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CCA 90 bp | AAACTTGATCCCAACCTCACACCACATACAAAAATCAATGCCATGTaGATTGTAGATCCAATTGTGAAAGGTGAAACAACACAACTTACA | + |
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Preference number: 5 (lower is better) Translates to: KLDPNLTPHTKINAM*IVDPIVKGETTQLT Trigger: TGTAAGTTGTGTTGTTTCACCTTTCACAATTGGATCTACAATCCACATGGCATTGATTTTTGTATGTGGTGTGAGGTTGGGATCAAGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CCA 90 bp | AATGAAACTCAAAATAGTCAACTAGTCACCATTCTTCCTTCTGTTTaGATCTATCATTGTTTATTGTGCACCTGTTATCTACCAGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: NETQNSQLVTILPSV*IYHCLLCTCYLPAN Trigger: GTTTGCTGGTAGATAACAGGTGCACAATAAACAATGATAGATCCAAACAGAAGGAAGAATGGTGACTAGTTGACTATTTTGAGTTTCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CCA 72 bp | CGTGGCGTCGCAAGTCCGCTTTCCAGTCTCAGCGGCTaGAGGAGGCCTCGGGGCGGCAGGGGGAGTTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: RGVASPLSSLSG*RRPRGGRGSLP Trigger: AGGCAAACTCCCCCTGCCGCCCCGAGGCCTCCTCCAGCCGCTGAGACTGGAAAGCGGACTTGCGACGCCACG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000659645.1 ENST00000664478.1 |
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| CDS CAA 72 bp | TGCCTTCCCCGTAGGACCGGGACGGTGTTGTCACACTaGTCACCAACGACGGCCGGCGTGGCGTCGCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: CLPRRTGTVLSH*SPTTAGVASQV Trigger: GACTTGCGACGCCACGCCGGCCGTCGTTGGTGACAAGTGTGACAACACCGTCCCGGTCCTACGGGGAAGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664478.1 |
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| CDS CCA 72 bp | AGGCCTCGGGGCGGCAGGGGGAGTTTGCCTCCCGGCTaGCTAGCTTCGCTAGACTCAGTCATTACTAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: RPRGGRGSLPPG*LASLDSVITKG Trigger: CCCCTTAGTAATGACTGAGTCTAGCGAAGCTAGCCAGCCGGGAGGCAAACTCCCCCTGCCGCCCCGAGGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000659645.1 ENST00000664478.1 |
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| CDS CCA 72 bp | CGGTGTTGTCACACTTGTCACCAACGACGGCCGGCGTaGCGTCGCAAGTCCGCTTTCCAGTCTCAGCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RCCHTCHQRRPA*RRKSAFQSQRL Trigger: CAGCCGCTGAGACTGGAAAGCGGACTTGCGACGCCACGCCGGCCGTCGTTGGTGACAAGTGTGACAACACCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659645.1 ENST00000664478.1 |
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| CDS CAA 72 bp | GGTGGATTCCGTAGGACCGGGACGGTGTTGTCACACTaGTCACCAACGACGGCCGGCGTGGCGTCGCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: GGFRRTGTVLSH*SPTTAGVASQV Trigger: GACTTGCGACGCCACGCCGGCCGTCGTTGGTGACAAGTGTGACAACACCGTCCCGGTCCTACGGAATCCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS CAA 72 bp | ACTGACCCAGGTGGATTCCGTAGGACCGGGACGGTGTaGTCACACTTGTCACCAACGACGGCCGGCGTGGCG | + |
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Preference number: 6 (lower is better) Translates to: TDPGGFRRTGTV*SHLSPTTAGVA Trigger: CGCCACGCCGGCCGTCGTTGGTGACAAGTGTGACAACACCGTCCCGGTCCTACGGAATCCACCTGGGTCAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS CAA 72 bp | GGAAGAGAATGCCTTCCCCGTAGGACCGGGACGGTGTaGTCACACTTGTCACCAACGACGGCCGGCGTGGCG | + |
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Preference number: 6 (lower is better) Translates to: GRECLPRRTGTV*SHLSPTTAGVA Trigger: CGCCACGCCGGCCGTCGTTGGTGACAAGTGTGACAACACCGTCCCGGTCCTACGGGGAAGGCATTCTCTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664478.1 |
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| CDS CAA 90 bp | TCCAGTCTCAGCGGCTGGAGGAGGCCTCGGGGCGGCAGGGGGAGTTaGCCTCCCGGCTGGCTAGCTTCGCTAGACTCAGTCATTACTAAG | + |
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Preference number: 6 (lower is better) Translates to: SSLSGWRRPRGGRGS*PPGWLASLDSVITK Trigger: CTTAGTAATGACTGAGTCTAGCGAAGCTAGCCAGCCGGGAGGCAAACTCCCCCTGCCGCCCCGAGGCCTCCTCCAGCCGCTGAGACTGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000659645.1 ENST00000664478.1 |
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| CDS CAA 90 bp | ACTGACCCAGGTGGATTCCGTAGGACCGGGACGGTGTTGTCACACTaGTCACCAACGACGGCCGGCGTGGCGTCGCAAGTCCGCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: TDPGGFRRTGTVLSH*SPTTAGVASQVRFP Trigger: TGGAAAGCGGACTTGCGACGCCACGCCGGCCGTCGTTGGTGACAAGTGTGACAACACCGTCCCGGTCCTACGGAATCCACCTGGGTCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS CAA 90 bp | GGAAGAGAATGCCTTCCCCGTAGGACCGGGACGGTGTTGTCACACTaGTCACCAACGACGGCCGGCGTGGCGTCGCAAGTCCGCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: GRECLPRRTGTVLSH*SPTTAGVASQVRFP Trigger: TGGAAAGCGGACTTGCGACGCCACGCCGGCCGTCGTTGGTGACAAGTGTGACAACACCGTCCCGGTCCTACGGGGAAGGCATTCTCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664478.1 |
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| CDS CAA 90 bp | TCTCAGGTTACTGACCCAGGTGGATTCCGTAGGACCGGGACGGTGTaGTCACACTTGTCACCAACGACGGCCGGCGTGGCGTCGCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: SQVTDPGGFRRTGTV*SHLSPTTAGVASQV Trigger: GACTTGCGACGCCACGCCGGCCGTCGTTGGTGACAAGTGTGACAACACCGTCCCGGTCCTACGGAATCCACCTGGGTCAGTAACCTGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS CAA 90 bp | CTCTCCTGGCAGAGCCGCGGGAGGCGTCGGAAAGTTTCCTACCACTaGAGGGACGAAGGTGGATGGATCGAGAGCCTTGTTTCCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LSWQSRGRRRKVSYH*RDEGGWIESLVSLL Trigger: CAGCAGGGAAACAAGGCTCTCGATCCATCCACCTTCGTCCCTCAAGTGGTAGGAAACTTTCCGACGCCTCCCGCGGCTCTGCCAGGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS CCA 72 bp | GGTGGATGGATCGAGAGCCTTGTTTCCCTGCTGGGATaGCCGAATGTACCAGAAGTCTCGCTGGCGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GGWIESLVSLLG*PNVPEVSLASS Trigger: GCTGCTCGCCAGCGAGACTTCTGGTACATTCGGCCATCCCAGCAGGGAAACAAGGCTCTCGATCCATCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS GCA 72 bp | GGGACGAAGGTGGATGGATCGAGAGCCTTGTTTCCCTaGTGGGATGGCCGAATGTACCAGAAGTCTCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GTKVDGSRALFP*WDGRMYQKSRW Trigger: CCAGCGAGACTTCTGGTACATTCGGCCATCCCAGCAGGGAAACAAGGCTCTCGATCCATCCACCTTCGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS TCA 72 bp | AGAGCCGCGGGAGGCGTCGGAAAGTTTCCTACCACTTaGGGGACGAAGGTGGATGGATCGAGAGCCTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: RAAGGVGKFPTT*GTKVDGSRALF Trigger: AAACAAGGCTCTCGATCCATCCACCTTCGTCCCTCAAGTGGTAGGAAACTTTCCGACGCCTCCCGCGGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659645.1 ENST00000664478.1 |
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| CDS GCA 72 bp | GGAGGGGAAGGCATATTCTCAACTCTCCAGCACCGATaGGTCCTTAGCCTTCCCTTCACACTGACGCCTCGA | + |
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Preference number: 6 (lower is better) Translates to: GGEGIFSTLQHR*VLSLPFTLTPR Trigger: TCGAGGCGTCAGTGTGAAGGGAAGGCTAAGGACGCATCGGTGCTGGAGAGTTGAGAATATGCCTTCCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454729.1 |
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| CDS CCA 72 bp | ACGAAGGTGGATGGATCGAGAGCCTTGTTTCCCTGCTaGGATGGCCGAATGTACCAGAAGTCTCGCTGGCGA | + |
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Preference number: 6 (lower is better) Translates to: TKVDGSRALFPC*DGRMYQKSRWR Trigger: TCGCCAGCGAGACTTCTGGTACATTCGGCCATCCCAGCAGGGAAACAAGGCTCTCGATCCATCCACCTTCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS GCA 72 bp | GCTGAGGATTCACCAAGCATCACAGAACATGGTTGCTaGCTTCAGGGCGCAGGCAATGGAGGTTCCCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: AEDSPSITEHGC*LQGAGNGGSLA Trigger: AGCAAGGGAACCTCCATTGCCTGCGCCCTGAAGGCAGCAACCATGTTCTGTGATGCTTGGTGAATCCTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS CCA 72 bp | GCGTCGGAAAGTTTCCTACCACTTGAGGGACGAAGGTaGATGGATCGAGAGCCTTGTTTCCCTGCTGGGATG | + |
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Preference number: 6 (lower is better) Translates to: ASESFLPLEGRR*MDREPCFPAGM Trigger: CATCCCAGCAGGGAAACAAGGCTCTCGATCCATCCACCTTCGTCCCTCAAGTGGTAGGAAACTTTCCGACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS CCA 72 bp | CAAATAAGAGCACGAGGTGGACTAGGAATGTACAGGTaGCCCCGTGAGCACAGAGCAAGTGCTGGGCTGACA | + |
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Preference number: 6 (lower is better) Translates to: QIRARGGLGMYR*PREHRASAGLT Trigger: TGTCAGCCCAGCACTTGCTCTGTGCTCACGGGGCCACCTGTACATTCCTAGTCCACCTCGTGCTCTTATTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS CAA 72 bp | TTGGAGTGGGCTGAGTCCCTCCCAAAAAGAAGGCAATaGTGTTACCCTCAGGCCATCAGGAGGGACAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: LEWAESLPKRRQ*CYPQAIRRDRG Trigger: GCCTCTGTCCCTCCTGATGGCCTGAGGGTAACACAATTGCCTTCTTTTTGGGAGGGACTCAGCCCACTCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS GCA 72 bp | AGGCAGGATGAATCTATGGGGGAAGGTCGGACTGATTaGTTTTCAAATACATCGCACGGCTCCGCTGACCGG | + |
|
Preference number: 6 (lower is better) Translates to: RQDESMGEGRTD*FSNTSHGSADR Trigger: CCGGTCAGCGGAGCCGTGCGATGTATTTGAAAAGCAATCAGTCCGACCTTCCCCCATAGATTCATCCTGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447876.5 |
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| CDS GCA 72 bp | CTAATATTGAACAACTCTCCCGGGCTGAGTAGCATTTaGACCTCCATTCACGGCACCTGGCTCTGGGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LILNNSPGLSSI*TSIHGTWLWGP Trigger: TGGACCCCAGAGCCAGGTGCCGTGAATGGAGGTGCAAATGCTACTCAGCCCGGGAGAGTTGTTCAATATTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653760.1 ENST00000665955.1 |
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| CDS CCA 72 bp | GGGCTGAGTAGCATTTGCACCTCCATTCACGGCACCTaGCTCTGGGGTCCAGGATGGAATATTGAAATAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLSSICTSIHGT*LWGPGWNIEIG Trigger: GCCTATTTCAATATTCCATCCTGGACCCCAGAGCCAGGTGCCGTGAATGGAGGTGCAAATGCTACTCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653760.1 ENST00000665955.1 |
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| CDS CCA 72 bp | TATGAAGCCCTACCAGACACCAAATCTGCTGACGCCTaGATCTTGGACTCCCCATCCTCCAGAACTACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: YEALPDTKSADA*ILDSPSSRTTS Trigger: GCTGGTAGTTCTGGAGGATGGGGAGTCCAAGATCCAGGCGTCAGCAGATTTGGTGTCTGGTAGGGCTTCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CAA 72 bp | AAGGGGCCTTCAGGAGCATTGTTCACATTCTCCGTCTaGTCCTGGGAGGCAGTTAGAGGATGTGGTCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: KGPSGALFTFSV*SWEAVRGCGHS Trigger: GGAGTGACCACATCCTCTAACTGCCTCCCAGGACAAGACGGAGAATGTGAACAATGCTCCTGAAGGCCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000413121.5 ENST00000443988.5 ENST00000447876.5 ENST00000454729.1 ENST00000458253.5 ENST00000653760.1 ENST00000661120.1 ENST00000664478.1 ENST00000665955.1 |
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| CDS CAA 72 bp | GCCCTACCAGACACCAAATCTGCTGACGCCTGGATCTaGGACTCCCCATCCTCCAGAACTACCAGCGATATA | + |
|
Preference number: 6 (lower is better) Translates to: ALPDTKSADAWI*DSPSSRTTSDI Trigger: TATATCGCTGGTAGTTCTGGAGGATGGGGAGTCCAAGATCCAGGCGTCAGCAGATTTGGTGTCTGGTAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CCA 72 bp | ACCACTGTTAAGGGCCAATTCCCTCAATTGTGGAGATaGAAAGGAACTGGCCCTTCCCAGTGGCACTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TTVKGQFPQLWR*KGTGPSQWHFS Trigger: GGAGAAGTGCCACTGGGAAGGGCCAGTTCCTTTCCATCTCCACAATTGAGGGAATTGGCCCTTAACAGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS CCA 72 bp | CCCTACCAGACACCAAATCTGCTGACGCCTGGATCTTaGACTCCCCATCCTCCAGAACTACCAGCGATATAT | + |
|
Preference number: 6 (lower is better) Translates to: PYQTPNLLTPGS*TPHPPELPAIY Trigger: ATATATCGCTGGTAGTTCTGGAGGATGGGGAGTCCAAGATCCAGGCGTCAGCAGATTTGGTGTCTGGTAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS TCA 72 bp | CACTGGGGCGCTCTGATTCTCAATATTGGAGTGGGCTaGGTCCCTCCCAAAAAGAAGGCAATTGTGTTACCC | + |
|
Preference number: 6 (lower is better) Translates to: HWGALILNIGVG*VPPKKKAIVLP Trigger: GGGTAACACAATTGCCTTCTTTTTGGGAGGGACTCAGCCCACTCCAATATTGAGAATCAGAGCGCCCCAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS GCA 72 bp | TTTGCTAACCAAGCTGGCTCTTACCTGTGTTCACGTTaGTCCCCTGATGTCAGCTACAGAGCAGGAAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: FANQAGSYLCSR*SPDVSYRAGNR Trigger: CCTGTTTCCTGCTCTGTAGCTGACATCAGGGGAGCAACGTGAACACAGGTAAGAGCCAGCTTGGTTAGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653760.1 |
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| CDS GCA 72 bp | TTGCTGCCTTCAGGGCGCAGGCAATGGAGGTTCCCTTaGTTTAGAACGTACAATGATGGTGAATTGTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLPSGRRQWRFP*FRTYNDGELCG Trigger: GCCACACAATTCACCATCATTGTACGTTCTAAAGCAAGGGAACCTCCATTGCCTGCGCCCTGAAGGCAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS GCA 72 bp | GACCCGAGGTCTTTGTGCCATGCTCGGCATATCAAGTaGCCCTCTTCAAATTGTACTGAGCTAGCGGTATAC | + |
|
Preference number: 6 (lower is better) Translates to: DPRSLCHARHIK*PSSNCTELAVY Trigger: GTATACCGCTAGCTCAGTACAATTTGAAGAGGGGCACTTGATATGCCGAGCATGGCACAAAGACCTCGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CCA 72 bp | CACAGAACATGGTTGCTGCCTTCAGGGCGCAGGCAATaGAGGTTCCCTTGCTTTAGAACGTACAATGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: HRTWLLPSGRRQ*RFPCFRTYNDG Trigger: ACCATCATTGTACGTTCTAAAGCAAGGGAACCTCCATTGCCTGCGCCCTGAAGGCAGCAACCATGTTCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS CCA 72 bp | CCAGCTGGGTGGAGGGCAAGGTTACCTAGCCTGAGCTaGCTGTTAAAGAATGGATTATCCAGAAGGATATGG | + |
|
Preference number: 6 (lower is better) Translates to: PAGWRARLPSLS*LLKNGLSRRIW Trigger: CCATATCCTTCTGGATAATCCATTCTTTAACAGCCAGCTCAGGCTAGGTAACCTTGCCCTCCACCCAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS TCA 72 bp | GACAGGATCGTATTAAGAGGTAGGGCCTTTGGGAAGTaGTTCAGTCATGGGGGCTCCACCATAATGAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: DRIVLRGRAFGK*FSHGGSTIMSR Trigger: CCTACTCATTATGGTGGAGCCCCCATGACTGAATCACTTCCCAAAGGCCCTACCTCTTAATACGATCCTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS GCA 72 bp | TGGTGCCCTTATAAAAGAAGATCCAGGGGGCTTCCTTaGCCCTTCCACCATGTAAGAATGCAGCAACAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: WCPYKRRSRGLP*PFHHVRMQQQG Trigger: ACCTTGTTGCTGCATTCTTACATGGTGGAAGGGGCAAGGAAGCCCCCTGGATCTTCTTTTATAAGGGCACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CCA 72 bp | GAGCAGACTGAAGAGGTGAGCAAGAGCCAGGTGCTATaGTCTGAATGCTGGTATCCTTCCAAAACTCACGTT | + |
|
Preference number: 6 (lower is better) Translates to: EQTEEVSKSQVL*SECWYPSKTHV Trigger: AACGTGAGTTTTGGAAGGATACCAGCATTCAGACCATAGCACCTGGCTCTTGCTCACCTCTTCAGTCTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS TCA 72 bp | ATAGGTCTTTGTCTCCCCTCACACTACATGAGGAGCTaGGGATTCACCAAGCATCACAGAACATGGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: IGLCLPSHYMRS*GFTKHHRTWLL Trigger: CAGCAACCATGTTCTGTGATGCTTGGTGAATCCTCAGCTCCTCATGTAGTGTGAGGGGAGACAAAGACCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS GCA 72 bp | GCAGAGATTAAAACCAGACCCGAGGTCTTTGTGCCATaGTCGGCATATCAAGTGCCCCTCTTCAAATTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: AEIKTRPEVFVP*SAYQVPLFKLY Trigger: GTACAATTTGAAGAGGGGCACTTGATATGCCGAGCATGGCACAAAGACCTCGGGTCTGGTTTTAATCTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CCA 72 bp | GAGGTGAGCAAGAGCCAGGTGCTATGGTCTGAATGCTaGTATCCTTCCAAAACTCACGTTGGAACCAAATAC | + |
|
Preference number: 6 (lower is better) Translates to: EVSKSQVLWSEC*YPSKTHVGTKY Trigger: GTATTTGGTTCCAACGTGAGTTTTGGAAGGATACCAGCATTCAGACCATAGCACCTGGCTCTTGCTCACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CAA 72 bp | CTAAGTCCCACTATTAAGGAAGACCGATTCCCATCATaGCAGAGGACTTATTCCCAACTCTGGAGAGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSPTIKEDRFPS*QRTYSQLWRGL Trigger: CAGCCCTCTCCAGAGTTGGGAATAAGTCCTCTGCAATGATGGGAATCGGTCTTCCTTAATAGTGGGACTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS CAA 90 bp | AGCAAAACAAATGTATGGTGTCAGAAGTCAGGCCAGTGGTTACCTTaGAGGGAAAGGGGCCTTCAGGAGCATTGTTCACATTCTCCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SKTNVWCQKSGQWLP*RERGLQEHCSHSPS Trigger: AGACGGAGAATGTGAACAATGCTCCTGAAGGCCCCTTTCCCTCAAAGGTAACCACTGGCCTGACTTCTGACACCATACATTTGTTTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CAA 90 bp | ATCTATGAAGCCCTACCAGACACCAAATCTGCTGACGCCTGGATCTaGGACTCCCCATCCTCCAGAACTACCAGCGATATATTTCTATTG | + |
|
Preference number: 6 (lower is better) Translates to: IYEALPDTKSADAWI*DSPSSRTTSDIFLL Trigger: CAATAGAAATATATCGCTGGTAGTTCTGGAGGATGGGGAGTCCAAGATCCAGGCGTCAGCAGATTTGGTGTCTGGTAGGGCTTCATAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CCA 72 bp | TCTCTCTTCCTCCGTTGTCCTTTGATAAACACCAACTaGCAGAGGGGACATGGAGCATTTTTCCTTCAATTG | + |
|
Preference number: 6 (lower is better) Translates to: SLFLRCPLINTN*QRGHGAFFLQL Trigger: CAATTGAAGGAAAAATGCTCCATGTCCCCTCTGCCAGTTGGTGTTTATCAAAGGACAACGGAGGAAGAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000413121.5 ENST00000443988.5 ENST00000447876.5 ENST00000454729.1 ENST00000458253.5 ENST00000653760.1 ENST00000661120.1 ENST00000664478.1 ENST00000665955.1 |
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| CDS CCA 72 bp | AGAGGAGCAAAACTCCTTGACCGGATGTCATCCATCTaGGGCTTCCAGAAGGAAACTGATAAGTCTATATAC | + |
|
Preference number: 6 (lower is better) Translates to: RGAKLLDRMSSI*GFQKETDKSIY Trigger: GTATATAGACTTATCAGTTTCCTTCTGGAAGCCCCAGATGGATGACATCCGGTCAAGGAGTTTTGCTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS CCA 72 bp | ATGGGGGCCAGGTTTACGAAAGCCCTTATAAAATACTaGCTGAAAGGAAATAATGCTCCTTGGCACCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: MGARFTKALIKY*LKGNNAPWHHR Trigger: TCTGTGGTGCCAAGGAGCATTATTTCCTTTCAGCCAGTATTTTATAAGGGCTTTCGTAAACCTGGCCCCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS TCA 72 bp | AAAACAAAAAGGCACGAGTCAACTGAGGTGGCCTGGTaGTACACAGATATGTGTCTCCCAAAGTTAAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: KTKRHESTEVAW*YTDMCLPKLKG Trigger: TCCCTTTAACTTTGGGAGACACATATCTGTGTATCACCAGGCCACCTCAGTTGACTCGTGCCTTTTTGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS TCA 72 bp | TCTCAACTGATGAGCCTTGATTATGGGTTCCAGGATTaGGATGCAGTAACAAATTTCAGCCTTGGGCACATG | + |
|
Preference number: 6 (lower is better) Translates to: SQLMSLDYGFQD*DAVTNFSLGHM Trigger: CATGTGCCCAAGGCTGAAATTTGTTACTGCATCTCAATCCTGGAACCCATAATCAAGGCTCATCAGTTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CCA 72 bp | CCTGTGGGAAACAGACGGCTAATTCATATGGTAAACTaGGGTGACACTAATGAAGGATCTGTTTACAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PVGNRRLIHMVN*GDTNEGSVYRG Trigger: ACCTCTGTAAACAGATCCTTCATTAGTGTCACCCCAGTTTACCATATGAATTAGCCGTCTGTTTCCCACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS CAA 72 bp | GACATGGAGCATTTTTCCTTCAATTGCAGTGATTCTTaGAGGGAAAGGGGCCTTCAGGAGCATTGTTCACAT | + |
|
Preference number: 6 (lower is better) Translates to: DMEHFSFNCSDS*RERGLQEHCSH Trigger: ATGTGAACAATGCTCCTGAAGGCCCCTTTCCCTCAAAGAATCACTGCAATTGAAGGAAAAATGCTCCATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000413121.5 ENST00000443988.5 ENST00000447876.5 ENST00000454729.1 ENST00000458253.5 ENST00000653760.1 ENST00000664478.1 ENST00000665955.1 |
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| CDS CAA 90 bp | CCTGAATGGACTAAGACATCAGATCATGCAAGAACCTGCACCACATaGATAAACCTGGACTTCATCTTGCAGAGCAATACAGAAATCACC | + |
|
Preference number: 6 (lower is better) Translates to: PEWTKTSDHARTCTT*INLDFILQSNTEIT Trigger: GGTGATTTCTGTATTGCTCTGCAAGATGAAGTCCAGGTTTATCAATGTGGTGCAGGTTCTTGCATGATCTGATGTCTTAGTCCATTCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS TCA 72 bp | AATGATGGTGAATTGTGTGGCTTATCAGCAAGTAATTaGGCCACAGGACAGCAATGCAACCTGATGCTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: NDGELCGLSASN*ATGQQCNLMLD Trigger: ATCTAGCATCAGGTTGCATTGCTGTCCTGTGGCTCAATTACTTGCTGATAAGCCACACAATTCACCATCATT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659645.1 |
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| CDS TCA 72 bp | TGTAGAGCATCACCCACTGCTGGTAAGAGTGGAGACTaGCACAATCTCTTTGGAAAACTGTTTGGCATTATT | + |
|
Preference number: 6 (lower is better) Translates to: CRASPTAGKSGD*HNLFGKLFGII Trigger: AATAATGCCAAACAGTTTTCCAAAGAGATTGTGTCAGTCTCCACTCTTACCAGCAGTGGGTGATGCTCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CAA 90 bp | AAATTTTCCCTTTGGTGTAGTATTTCATGGCTCTGTTATCTAATATaGAACAACTCTCCCGGGCTGAGTAGCATTTGCACCTCCATTCAC | + |
|
Preference number: 6 (lower is better) Translates to: KFSLWCSISWLCYLI*NNSPGLSSICTSIH Trigger: GTGAATGGAGGTGCAAATGCTACTCAGCCCGGGAGAGTTGTTCAATATTAGATAACAGAGCCATGAAATACTACACCAAAGGGAAAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653760.1 ENST00000665955.1 |
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| CDS CAA 90 bp | GAGCATCACCCACTGCTGGTAAGAGTGGAGACTGACACAATCTCTTaGGAAAACTGTTTGGCATTATTTATTAAAGTTGAGCATAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: EHHPLLVRVETDTIS*ENCLALFIKVEHSH Trigger: ATGACTATGCTCAACTTTAATAAATAATGCCAAACAGTTTTCCAAAGAGATTGTGTCAGTCTCCACTCTTACCAGCAGTGGGTGATGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CCA 72 bp | TGCTTAATTTATGACAAAAGTGTCCCTGCAGAGCATTaGAGAAAGGAAGTCTTTTCCATTCATCATGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: CLIYDKSVPAEH*RKEVFSIHHEG Trigger: CCCTTCATGATGAATGGAAAAGACTTCCTTTCTCCAATGCTCTGCAGGGACACTTTTGTCATAAATTAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS TCA 72 bp | TCATATGTCCAAAAAGGTTTCTCAACTGATGAGCCTTaGTTATGGGTTCCAGGATTGAGATGCAGTAACAAA | + |
|
Preference number: 6 (lower is better) Translates to: SYVQKGFSTDEP*LWVPGLRCSNK Trigger: TTTGTTACTGCATCTCAATCCTGGAACCCATAATCAAGGCTCATCAGTTGAGAAACCTTTTTGGACATATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CAA 72 bp | ACCATTCTTCCTTCTGTTTGGATCTATCATTGTTTATaGTGCACCTGTTATCTACCAGCAAACAGGAAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: TILPSVWIYHCL*CTCYLPANRKL Trigger: TAACTTCCTGTTTGCTGGTAGATAACAGGTGCACAATAAACAATGATAGATCCAAACAGAAGGAAGAATGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CAA 90 bp | GCTCAAATTTGTTTCTCTGGAAAAATCTATCTTCACAGCAAATCCTaGTTGCTAATCCATTCTATAAAAAGCGGATTCCACCATAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AQICFSGKIYLHSKS*LLIHSIKSGFHHKR Trigger: CCTCTTATGGTGGAATCCGCTTTTTATAGAATGGATTAGCAACAAGGATTTGCTGTGAAGATAGATTTTTCCAGAGAAACAAATTTGAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CAA 90 bp | CTGCTGGTAAGAGTGGAGACTGACACAATCTCTTTGGAAAACTGTTaGGCATTATTTATTAAAGTTGAGCATAGTCATGTTCTACAATTT | + |
|
Preference number: 6 (lower is better) Translates to: LLVRVETDTISLENC*ALFIKVEHSHVLQF Trigger: AAATTGTAGAACATGACTATGCTCAACTTTAATAAATAATGCCAAACAGTTTTCCAAAGAGATTGTGTCAGTCTCCACTCTTACCAGCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS TCA 72 bp | TATGATAATTCTATAAAGAAGTGGGTGCTTAATTTATaGCAAAAGTGTCCCTGCAGAGCATTGGAGAAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: YDNSIKKWVLNL*QKCPCRALEKG Trigger: TCCTTTCTCCAATGCTCTGCAGGGACACTTTTGTCATAAATTAAGCACCCACTTCTTTATAGAATTATCATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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| CDS CAA 72 bp | ATGGCAACACCTGTATGCCTGTATTTAGGCAACACTTaGTGTTTCCAAAAAGAAAACACAATGAATATCATC | + |
|
Preference number: 6 (lower is better) Translates to: MATPVCLYLGNT*CFQKENTMNII Trigger: GATGATATTCATTGTGTTTTCTTTTTGGAAACACAAAGTGTTGCCTAAATACAGGCATACAGGTGTTGCCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000653760.1 ENST00000665955.1 |
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| CDS CAA 72 bp | TTCTCTGGAAAAATCTATCTTCACAGCAAATCCTTGTaGCTAATCCATTCTATAAAAAGCGGATTCCACCAT | + |
|
Preference number: 6 (lower is better) Translates to: FSGKIYLHSKSL*LIHSIKSGFHH Trigger: ATGGTGGAATCCGCTTTTTATAGAATGGATTAGCAACAAGGATTTGCTGTGAAGATAGATTTTTCCAGAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000661120.1 |
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