RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PANK4 (Homo sapiens)

Ensembl gene IDs: ENSG00000157881

Ensembl transcript IDs: ENST00000378466.9, ENST00000435556.8, ENST00000468002.2, ENST00000471361.1, ENST00000486396.1, ENST00000487804.1, ENST00000491212.1, ENST00000502512.1, ENST00000502770.2, ENST00000505228.5, ENST00000514922.1, ENST00000515423.1, ENST00000615291.3, ENST00000625442.1, ENST00000625859.1, ENST00000626423.2, ENST00000627774.1, ENST00000628406.1, ENST00000628687.1, ENST00000628707.1, ENST00000629208.1, ENST00000629615.1, ENST00000629645.1, ENST00000630982.2

Found 975 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGCATGTGTGTGGGACACCGCGCCGGGCTGGGCTGTGCGCACCCTaGCCTAGTGGAGCTGGCTGTTCGCGCCAGCCTTCAACCAGGCGG +
Preference number: 1 (lower is better)
Translates to: PHVCGTPRRAGLCAP*PSGAGCSRQPSTRR
Trigger: CCGCCTGGTTGAAGGCTGGCGCGAACAGCCAGCTCCACTAGGGCAGGGTGCGCACAGCCCAGCCCGGCGCGGTGTCCCACACACATGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
3UTR TCA 90 bp GGGCTGCGTGGTAGTTTGTGTGGACAGCACGGCCCATGCCCTCGATaGCCACCAGATCCGCGCCACGCTCCCGCACCAGTGCGGCCAGCC +
Preference number: 1 (lower is better)
Translates to: GLRGSLCGQHGPCPR*PPDPRHAPAPVRPA
Trigger: GGCTGGCCGCACTGGTGCGGGAGCGTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCCGTGCTGTCCACACAAACTACCACGCAGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
3UTR TCA 90 bp AGAACTCTTGGTCGGCGGTGGCCGACTTCCCGAAGCTGCTGGCGATaGGGTTCCCGCTCAGCCCGAGAGTCTGGTGGGCGCCGCCGTAGA +
Preference number: 1 (lower is better)
Translates to: RTLGRRWPTSRSCWR*GSRSARESGGRRRR
Trigger: TCTACGGCGGCGCCCACCAGACTCTCGGGCTGAGCGGGAACCTCATCGCCAGCAGCTTCGGGAAGTCGGCCACCGCCGACCAAGAGTTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR GCA 90 bp GTGCGGGGTTACCTGAGGTCGAGGCACGGGGAGCTGGAGCCCGTCTaGACCAGCAGCAGCCTCTCTTCCTGGAGCGCAGAGTGCACGACA +
Preference number: 1 (lower is better)
Translates to: VRGYLRSRHGELEPV*TSSSLSSWSAECTT
Trigger: TGTCGTGCACTCTGCGCTCCAGGAAGAGAGGCTGCTGCTGGTGCAGACGGGCTCCAGCTCCCCGTGCCTCGACCTCAGGTAACCCCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502512.1
ENST00000625442.1
3UTR CCA 90 bp TGTTCGCGCCAGCCTTCAACCAGGCGGCGCTCTGAGGCAGAATCCTaGGCAAGAGGGAGGAGCCTAGGACCGTGGCGACCTCAGGGCCAC +
Preference number: 1 (lower is better)
Translates to: CSRQPSTRRRSEAES*ARGRSLGPWRPQGH
Trigger: GTGGCCCTGAGGTCGCCACGGTCCTAGGCTCCTCCCTCTTGCCCAGGATTCTGCCTCAGAGCGCCGCCTGGTTGAAGGCTGGCGCGAACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
3UTR GCA 90 bp CTGGAGCGCAGAGTGCACGACAGGGTCCATGCCCGCAATACGCTCTaGCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCAGGGCGGG +
Preference number: 1 (lower is better)
Translates to: LERRVHDRVHARNTL*HDEGLAVGHVVQGG
Trigger: CCCGCCCTGAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGCACTCTGCGCTCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
3UTR GCA 90 bp TTATCCAGGCGGCTGAGGTCGAGGCACGGGGAGCTGGAGCCCGTCTaGACCAGCAGCAGCCTCTCTTCCTGGAGCGCAGAGTGCACGACA +
Preference number: 1 (lower is better)
Translates to: LSRRLRSRHGELEPV*TSSSLSSWSAECTT
Trigger: TGTCGTGCACTCTGCGCTCCAGGAAGAGAGGCTGCTGCTGGTGCAGACGGGCTCCAGCTCCCCGTGCCTCGACCTCAGCCGCCTGGATAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
3UTR GCA 90 bp TCTGGTGGGCGCCGCCGTAGACGTCCCGCACCAGCATGTCCACATTaGTGTGCTGGCCCCTCGAGGCCAGGTGCAGGAGCTCGTCAAACT +
Preference number: 1 (lower is better)
Translates to: SGGRRRRRPAPACPH*CAGPSRPGAGARQT
Trigger: AGTTTGACGAGCTCCTGCACCTGGCCTCGAGGGGCCAGCACAGCAATGTGGACATGCTGGTGCGGGACGTCTACGGCGGCGCCCACCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR CCA 90 bp GGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTaGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATG +
Preference number: 1 (lower is better)
Translates to: GSMPAIRSATMRDSL*VTSFRAGPELHARM
Trigger: CATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
3UTR TCA 90 bp CAGAGTGCACGACAGGGTCCATGCCCGCAATACGCTCTGCCACGATaGGGGACTCGCTGTGGGTCACGTCGTTCAGGGCGGGGCCTGAGT +
Preference number: 1 (lower is better)
Translates to: QSARQGPCPQYALPR*GTRCGSRRSGRGLS
Trigger: ACTCAGGCCCCGCCCTGAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGCACTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
3UTR GCA 90 bp TACACGCGGTCCAGGCTGTGCAGCCGTGCGTGGAGGCAGGCCAGCTaGCCAATGTCGTTGCTGATCATGTGCAGCAGGCTCTTCGCCATG +
Preference number: 1 (lower is better)
Translates to: YTRSRLCSRAWRQAS*PMSLLIMCSRLFAM
Trigger: CATGGCGAAGAGCCTGCTGCACATGATCAGCAACGACATTGGGCAGCTGGCCTGCCTCCACGCACGGCTGCACAGCCTGGACCGCGTGTA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR CCA 90 bp AAGAAGCCTCCAAAGTACACGCGGTCCAGGCTGTGCAGCCGTGCGTaGAGGCAGGCCAGCTGCCCAATGTCGTTGCTGATCATGTGCAGC +
Preference number: 1 (lower is better)
Translates to: KKPPKYTRSRLCSRA*RQASCPMSLLIMCS
Trigger: GCTGCACATGATCAGCAACGACATTGGGCAGCTGGCCTGCCTCCACGCACGGCTGCACAGCCTGGACCGCGTGTACTTTGGAGGCTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR CCA 90 bp GATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTaGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCAC +
Preference number: 1 (lower is better)
Translates to: DSNMNVSQDKAASRL*VTRICAAGVYVPRH
Trigger: GTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR GCA 90 bp CTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTaGGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAAT +
Preference number: 1 (lower is better)
Translates to: LPGQSCVSPLGHTHL*GWGVCAASQQYHIN
Trigger: ATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR GCA 90 bp CGTGCGTGGAGGCAGGCCAGCTGCCCAATGTCGTTGCTGATCATGTaGAGCAGGCTCTTCGCCATGTCTTCTTTGGAGAACTCTTGGTCG +
Preference number: 1 (lower is better)
Translates to: RAWRQASCPMSLLIM*SRLFAMSSLENSWS
Trigger: CGACCAAGAGTTCTCCAAAGAAGACATGGCGAAGAGCCTGCTGCACATGATCAGCAACGACATTGGGCAGCTGGCCTGCCTCCACGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR CCA 90 bp GGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTaGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTG +
Preference number: 1 (lower is better)
Translates to: GQSCVSPLGHTHLCG*GVCAASQQYHINTL
Trigger: CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR CCA 90 bp TGGGGGTGGTTGGTCTGGAACCGGAACTCAGGGTCGGAATCCTTCTaGTACACGAAGGCCTCATGGGGGATGTTCTTGAGCACGAAGTTG +
Preference number: 1 (lower is better)
Translates to: WGWLVWNRNSGSESF*YTKASWGMFLSTKL
Trigger: CAACTTCGTGCTCAAGAACATCCCCCATGAGGCCTTCGTGTACCAGAAGGATTCCGACCCTGAGTTCCGGTTCCAGACCAACCACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR GCA 90 bp CGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTaGCGCGTCACAGCAGTACCATATAAATACGTTGATTTGAACGCA +
Preference number: 1 (lower is better)
Translates to: RLASGSHASVRLGCM*RVTAVPYKYVDLNA
Trigger: TGCGTTCAAATCAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR TCA 90 bp CTCAAACTTAATGAAGTGCAGTCGAGCAGTGATCTCTTCTTGAACTaGAATCTCATAGGGCGGCTCATGTTCACGTTCTGTGTCCTGGAA +
Preference number: 1 (lower is better)
Translates to: LKLNEVQSSSDLFLN*NLIGRLMFTFCVLE
Trigger: TTCCAGGACACAGAACGTGAACATGAGCCGCCCTATGAGATTTCAGTTCAAGAAGAGATCACTGCTCGACTGCACTTCATTAAGTTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
3UTR TCA 90 bp GGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGATTTaGACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGT +
Preference number: 1 (lower is better)
Translates to: GVCAASQQYHINTLI*TQFPCGGKNTFLTS
Trigger: ACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGTTCAAATCAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR-3UTR CCA 90 bp CGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATGACGGCCAGCTTGAGGCGAGGCACGGGGAGCTaGAGCCCGTCTGCACCAGCA +
Preference number: 2 (lower is better)
Translates to: RPPSRSASHAFLMTASLRRGTGS*SPSAPA
Trigger: TGCTGGTGCAGACGGGCTCCAGCTCCCCGTGCCTCG...CCTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
3UTR-3UTR TCA 90 bp ATGCCCTCGATGACCACCAGATCCGCGCCACGCTCCCGCACCAGTGCGGCCAGCGTTCAGGGCGGGGCCTaGGTTGCACGCCAGGATGAC +
Preference number: 2 (lower is better)
Translates to: MPSMTTRSAPRSRTSAASVQGGA*VARQDD
Trigger: GTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAAC...GCTGGCCGCACTGGTGCGGGAGCGTGGCGCGGATCTGGTGGTCATCGAGGGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
3UTR CAA 90 bp AAGAGTCCGGCAGCTGCAGCGCCTCACTCGGCTGGGACCTCGTACTaGAAGATGACGCTGAAGAGCCGGCCGCCCAGCCGCTCGGCCAGC +
Preference number: 2 (lower is better)
Translates to: KSPAAAAPHSAGTSY*KMTLKSRPPSRSAS
Trigger: GCTGGCCGAGCGGCTGGGCGGCCGGCTCTTCAGCGTCATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGCGCTGCAGCTGCCGGACTCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
3UTR-3UTR TCA 90 bp CACTCGGCTGGGACCTCGTACTTGAAGATGACGCTGAAGAGCCGGCCGCCCAGCGGCCCATGCCCTCGATaGCCACCAGATCCGCGCCAC +
Preference number: 2 (lower is better)
Translates to: HSAGTSYLKMTLKSRPPSGPCPR*PPDPRH
Trigger: GTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCC...GCTGGGCGGCCGGCTCTTCAGCGTCATCTTCAAGTACGAGGTCCCAGCCGAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
3UTR-3UTR CCA 90 bp CGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATGACGGCCAGCTTGAGGAGCAGCCTCTCTTCCTaGAGCGCAGAGTGCACGACA +
Preference number: 2 (lower is better)
Translates to: RPPSRSASHAFLMTASLRSSLSS*SAECTT
Trigger: TGTCGTGCACTCTGCGCTCCAGGAAGAGAGGCTGCT...CCTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
3UTR-3UTR CCA 90 bp CCTGGAAAACAGAGTAGGGGAGGCCGCATGTGTGTGGGACACCGCGCCGGGCTGAGGAGCCTAGGACCGTaGCGACCTCAGGGCCACCCA +
Preference number: 2 (lower is better)
Translates to: PGKQSRGGRMCVGHRAGLRSLGP*RPQGHP
Trigger: TGGGTGGCCCTGAGGTCGCCACGGTCCTAGGCTCCT...CAGCCCGGCGCGGTGTCCCACACACATGCGGCCTCCCCTACTCTGTTTTCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
3UTR CAA 90 bp CTCTCCCGGGGGAGCACAGGCGGGCGCAGGTTCCTACAAAGGGTCTaGAAGGGACACGGCGGAAGGCAGGGGAGGCTGTCCCTGCTAGAA +
Preference number: 2 (lower is better)
Translates to: LSRGSTGGRRFLQRV*KGHGGRQGRLSLLE
Trigger: TTCTAGCAGGGACAGCCTCCCCTGCCTTCCGCCGTGTCCCTTCAAGACCCTTTGTAGGAACCTGCGCCCGCCTGTGCTCCCCCGGGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
3UTR-3UTR GCA 90 bp GATGACGCTGAAGAGCCGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATGCACGACAGGGTCCATaGCCGCAATACGCTCTGCCA +
Preference number: 2 (lower is better)
Translates to: DDAEEPAAQPLGQPRVLDARQGP*PQYALP
Trigger: TGGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGC...ATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCGGCTCTTCAGCGTCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
3UTR-3UTR TCA 90 bp ACGACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTTCAGGGCGGGGCCTaGGTTGCACGCCAGGATGAC +
Preference number: 2 (lower is better)
Translates to: TTGSMPAIRSATMRDSLWVQGGA*VARQDD
Trigger: GTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAAC...CCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
3UTR-3UTR TCA 90 bp GTGGACAGCACGGCCCATGCCCTCGATGACCACCAGATCCGCGCCACGCTCCCGCACATTCCTGACAAGTaGCAAGCAGAAGAGTCCGGC +
Preference number: 2 (lower is better)
Translates to: VDSTAHALDDHQIRATLPHIPDK*QAEESG
Trigger: GCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTG...CGGGAGCGTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCCGTGCTGTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
3UTR-3UTR GCA 90 bp AGCCCAGGAGGGAGAGAACAGGTGCAGGGTGCGGGGTTACCTGAGGTCGAGGCAGCCCGCAATACGCTCTaGCACGATGAGGGACTCGCT +
Preference number: 2 (lower is better)
Translates to: SPGGREQVQGAGLPEVEAARNTL*HDEGLA
Trigger: AGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGC...TGCCTCGACCTCAGGTAACCCCGCACCCTGCACCTGTTCTCTCCCTCCTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502512.1
ENST00000625442.1
3UTR-3UTR GCA 90 bp GAGGCTCTCGCAGCGCAGGGCTGCGTGGTAGTTTGTGTGGACAGCACGGCCCATGCACGACAGGGTCCATaGCCGCAATACGCTCTGCCA +
Preference number: 2 (lower is better)
Translates to: EALAAQGCVVVCVDSTAHARQGP*PQYALP
Trigger: TGGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGC...ATGGGCCGTGCTGTCCACACAAACTACCACGCAGCCCTGCGCTGCGAGAGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
3UTR-3UTR GCA 90 bp GCAGCAGGCTCTTCGCCATGTCTTCTTTGGAGAACTCTTGGTCGGCGGTGGCCGCGCCTCCAATGGAGCTaGCGCCGACCCACTCGAACC +
Preference number: 2 (lower is better)
Translates to: AAGSSPCLLWRTLGRRWPRLQWS*RRPTRT
Trigger: GGTTCGAGTGGGTCGGCGGCAGCTCCATTGGAGGCG...CGGCCACCGCCGACCAAGAGTTCTCCAAAGAAGACATGGCGAAGAGCCTGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR-3UTR TCA 90 bp TTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTGCAGCGCCTCACTCGGCTGTTCAGGGCGGGGCCTaGGTTGCACGCCAGGATGAC +
Preference number: 2 (lower is better)
Translates to: FLTSDKQKSPAAAAPHSAVQGGA*VARQDD
Trigger: GTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAAC...AGCCGAGTGAGGCGCTGCAGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
3UTR-3UTR CCA 90 bp CACATTGCTGTGCTGGCCCCTCGAGGCCAGGTGCAGGAGCTCGTCAAACTTCTTCCGCCCCCGGTCGCCTaGATGACCTTGGTCTCTGTG +
Preference number: 2 (lower is better)
Translates to: HIAVLAPRGQVQELVKLLPPPVA*MTLVSV
Trigger: CACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGG...AAGAAGTTTGACGAGCTCCTGCACCTGGCCTCGAGGGGCCAGCACAGCAATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR-3UTR CCA 90 bp GCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCCGCAGAGGTGCCGCCTCCAATaGAGCTGCCGCCGACCCACT +
Preference number: 2 (lower is better)
Translates to: APLNQARHHVLLVDFQPQRCRLQ*SCRRPT
Trigger: AGTGGGTCGGCGGCAGCTCCATTGGAGGCGGCACCT...CTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR CAA 90 bp AGGCTGTGCAGCCGTGCGTGGAGGCAGGCCAGCTGCCCAATGTCGTaGCTGATCATGTGCAGCAGGCTCTTCGCCATGTCTTCTTTGGAG +
Preference number: 2 (lower is better)
Translates to: RLCSRAWRQASCPMS*LIMCSRLFAMSSLE
Trigger: CTCCAAAGAAGACATGGCGAAGAGCCTGCTGCACATGATCAGCAACGACATTGGGCAGCTGGCCTGCCTCCACGCACGGCTGCACAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR-3UTR TCA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGCACATTCCTGACAAGTaGCAAGCAGAAGAGTCCGGC +
Preference number: 2 (lower is better)
Translates to: SQDKAASRLWVTRICAAGHIPDK*QAEESG
Trigger: GCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTG...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR-3UTR TCA 90 bp CTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACACACATTCCTGACAAGTaGCAAGCAGAAGAGTCCGGC +
Preference number: 2 (lower is better)
Translates to: LASGSHASVRLGCMCRVTHIPDK*QAEESG
Trigger: GCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTG...TGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR-3UTR TCA 90 bp GTCTTTGAACTTGTAGGCCCCGCCCCCGGTCGCCTGGATGACCTTGGTCTCTGTTCCTACAAAGGGTCTTaGAGGGACACGGCGGAAGGC +
Preference number: 2 (lower is better)
Translates to: VFELVGPAPGRLDDLGLCSYKGS*RDTAEG
Trigger: GCCTTCCGCCGTGTCCCTTCAAGACCCTTTGTAGGA...ACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGGGGCCTACAAGTTCAAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
3UTR-3UTR CCA 90 bp CAGCATGTCCACATTGCTGTGCTGGCCCCTCGAGGCCAGGTGCAGGAGCTCGTCAAATGTGGGGGTGGTTaGTCTGGAACCGGAACTCAG +
Preference number: 2 (lower is better)
Translates to: QHVHIAVLAPRGQVQELVKCGGG*SGTGTQ
Trigger: CTGAGTTCCGGTTCCAGACCAACCACCCCCACATTT...GACGAGCTCCTGCACCTGGCCTCGAGGGGCCAGCACAGCAATGTGGACATGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR-3UTR GCA 90 bp AAGAAGCCTCCAAAGTACACGCGGTCCAGGCTGTGCAGCCGTGCGTGGAGGCAGTCGTTGCTGATCATGTaGAGCAGGCTCTTCGCCATG +
Preference number: 2 (lower is better)
Translates to: KKPPKYTRSRLCSRAWRQSLLIM*SRLFAM
Trigger: CATGGCGAAGAGCCTGCTGCACATGATCAGCAACGA...CTGCCTCCACGCACGGCTGCACAGCCTGGACCGCGTGTACTTTGGAGGCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR-3UTR CCA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATGCTGCGTCTCGCCTCTaGGTCACACGCATCTGTGCG +
Preference number: 2 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYAASRL*VTRICA
Trigger: CGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGC...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR-3UTR CCA 90 bp TCCAATGGAGCTGCCGCCGACCCACTCGAACCTGTCCTCCGTCTCCACCTTCACAAATGTGGGGGTGGTTaGTCTGGAACCGGAACTCAG +
Preference number: 2 (lower is better)
Translates to: SNGAAADPLEPVLRLHLHKCGGG*SGTGTQ
Trigger: CTGAGTTCCGGTTCCAGACCAACCACCCCCACATTT...GTGAAGGTGGAGACGGAGGACAGGTTCGAGTGGGTCGGCGGCAGCTCCATTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR-3UTR TCA 90 bp CTCATAGGGCGGCTCATGTTCACGTTCTGTGTCCTGGAAAACAGAGTAGGGGAGAACCAGGCGGCGCTCTaGGGCAGAATCCTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: LIGRLMFTFCVLENRVGENQAAL*GRILGK
Trigger: CTTGCCCAGGATTCTGCCTCAGAGCGCCGCCTGGTT...CTCCCCTACTCTGTTTTCCAGGACACAGAACGTGAACATGAGCCGCCCTATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
3UTR-3UTR TCA 90 bp GCCCCGCCCCCGGTCGCCTGGATGACCTTGGTCTCTGTGTTGACGAGATGGTCTGATCTCTTCTTGAACTaGAATCTCATAGGGCGGCTC +
Preference number: 2 (lower is better)
Translates to: APPPVAWMTLVSVLTRWSDLFLN*NLIGRL
Trigger: GAGCCGCCCTATGAGATTTCAGTTCAAGAAGAGATC...AGACCATCTCGTCAACACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
3UTR-3UTR GCA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATGGTCACACGCATCTGTaGGGCTGGGGTGTATGTGCC +
Preference number: 2 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYGHTHL*GWGVCA
Trigger: GGCACATACACCCCAGCCGCACAGATGCGTGTGACC...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR-3UTR CCA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATACGCATCTGTGCGGCTaGGGTGTATGTGCCGCGTCA +
Preference number: 2 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYTHLCG*GVCAAS
Trigger: TGACGCGGCACATACACCCCAGCCGCACAGATGCGT...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR-3UTR CCA 90 bp GAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGAGGAGCCTAGGACCGTaGCGACCTCAGGGCCACCCA +
Preference number: 2 (lower is better)
Translates to: EVAPLNQARHHVLLVDFQRSLGP*RPQGHP
Trigger: TGGGTGGCCCTGAGGTCGCCACGGTCCTAGGCTCCT...CTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
3UTR-3UTR CCA 90 bp CACGTCCTCCTTGTCGACTTTCAGCCGCAGCTTCTCTTCGATGAGGTCTTTGAACCGCCCCCGGTCGCCTaGATGACCTTGGTCTCTGTG +
Preference number: 2 (lower is better)
Translates to: HVLLVDFQPQLLFDEVFEPPPVA*MTLVSV
Trigger: CACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGG...TTCAAAGACCTCATCGAAGAGAAGCTGCGGCTGAAAGTCGACAAGGAGGACGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
3UTR-3UTR TCA 90 bp GCCCCGCCCCCGGTCGCCTGGATGACCTTGGTCTCTGTGTTGACGAGATGGTCTAGTGCAGTCGAGCAGTaGTCTCTTCTTGAACTGAAA +
Preference number: 2 (lower is better)
Translates to: APPPVAWMTLVSVLTRWSSAVEQ*SLLELK
Trigger: TTTCAGTTCAAGAAGAGATCACTGCTCGACTGCACT...AGACCATCTCGTCAACACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
3UTR-3UTR GCA 90 bp CCTCTTTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACCGGCTGGGGTGTATGTaGCGCGTCACAGCAGTACCA +
Preference number: 2 (lower is better)
Translates to: PLLKTLFGACPRCCVPSDRLGCM*RVTAVP
Trigger: TGGTACTGCTGTGACGCGGCACATACACCCCAGCCG...GTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAAAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615291.3
3UTR-3UTR GCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCGGCTGGGGTGTATGTaGCGCGTCACAGCAGTACCA +
Preference number: 2 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDRLGCM*RVTAVP
Trigger: TGGTACTGCTGTGACGCGGCACATACACCCCAGCCG...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR-3UTR CCA 90 bp GACGAGATGGTCTTTGATGAAGTCCAGGCAGGCTTCGATGTAGGTATTCTCAAAGAGGCCGCATGTGTGTaGGACACCGCGCCGGGCTGG +
Preference number: 2 (lower is better)
Translates to: DEMVFDEVQAGFDVGILKEAACV*DTAPGW
Trigger: CCAGCCCGGCGCGGTGTCCCACACACATGCGGCCTC...TTTGAGAATACCTACATCGAAGCCTGCCTGGACTTCATCAAAGACCATCTCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
3UTR CAA 90 bp GGGTCGGAATCCTTCTGGTACACGAAGGCCTCATGGGGGATGTTCTaGAGCACGAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCC +
Preference number: 2 (lower is better)
Translates to: GSESFWYTKASWGMF*STKLHPLIRHVITS
Trigger: GGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAGAACATCCCCCATGAGGCCTTCGTGTACCAGAAGGATTCCGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR-3UTR TCA 90 bp GATGAGGTCTTTGAACTTGTAGGCCCCGCCCCCGGTCGCCTGGATGACCTTGGTGATCTCTTCTTGAACTaGAATCTCATAGGGCGGCTC +
Preference number: 2 (lower is better)
Translates to: DEVFELVGPAPGRLDDLGDLFLN*NLIGRL
Trigger: GAGCCGCCCTATGAGATTTCAGTTCAAGAAGAGATC...ACCAAGGTCATCCAGGCGACCGGGGGCGGGGCCTACAAGTTCAAAGACCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
3UTR-3UTR CCA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCACGCATCTGTGCGGCTaGGGTGTATGTGCCGCGTCA +
Preference number: 2 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTTHLCG*GVCAAS
Trigger: TGACGCGGCACATACACCCCAGCCGCACAGATGCGT...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR-3UTR CCA 90 bp ACCTTGGTCTCTGTGTTGACGAGATGGTCTTTGATGAAGTCCAGGCAGGCTTCGTGGGGGTGGTTGGTCTaGAACCGGAACTCAGGGTCG +
Preference number: 2 (lower is better)
Translates to: TLVSVLTRWSLMKSRQASWGWLV*NRNSGS
Trigger: CGACCCTGAGTTCCGGTTCCAGACCAACCACCCCCA...CGAAGCCTGCCTGGACTTCATCAAAGACCATCTCGTCAACACAGAGACCAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR-3UTR TCA 90 bp GAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGTCCTACAAAGGGTCTTaGAGGGACACGGCGGAAGGC +
Preference number: 2 (lower is better)
Translates to: EVAPLNQARHHVLLVDFQSYKGS*RDTAEG
Trigger: GCCTTCCGCCGTGTCCCTTCAAGACCCTTTGTAGGA...CTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
3UTR-3UTR CCA 90 bp GATGAGGTCTTTGAACTTGTAGGCCCCGCCCCCGGTCGCCTGGATGACCTTGGTTCTGTGTTGACGAGATaGTCTTTGATGAAGTCCAGG +
Preference number: 2 (lower is better)
Translates to: DEVFELVGPAPGRLDDLGSVLTR*SLMKSR
Trigger: CCTGGACTTCATCAAAGACCATCTCGTCAACACAGA...ACCAAGGTCATCCAGGCGACCGGGGGCGGGGCCTACAAGTTCAAAGACCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
3UTR CAA 90 bp TTCTGGTACACGAAGGCCTCATGGGGGATGTTCTTGAGCACGAAGTaGCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACT +
Preference number: 2 (lower is better)
Translates to: FWYTKASWGMFLSTK*HPLIRHVITSSLST
Trigger: AGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAGAACATCCCCCATGAGGCCTTCGTGTACCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR-3UTR CCA 90 bp GAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGGGGAAAATGTGGGGGTaGTTGGTCTGGAACCGGAAC +
Preference number: 2 (lower is better)
Translates to: EVAPLNQARHHVLLVDFQGKMWG*LVWNRN
Trigger: GTTCCGGTTCCAGACCAACCACCCCCACATTTTCCC...CTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR-3UTR TCA 90 bp TTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTCACATTCCTGACAAGTaGCAAGCAGAAGAGTCCGGC +
Preference number: 2 (lower is better)
Translates to: LKTLFGACPRCCVPSDIPHIPDK*QAEESG
Trigger: GCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTG...AGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR-3UTR GCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCGGCTGGGGTGTATGTaGCGCGTCACAGCAGTACCA +
Preference number: 2 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPRLGCM*RVTAVP
Trigger: TGGTACTGCTGTGACGCGGCACATACACCCCAGCCG...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR-3UTR CCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTACGCATCTGTGCGGCTaGGGTGTATGTGCCGCGTCA +
Preference number: 2 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPTHLCG*GVCAAS
Trigger: TGACGCGGCACATACACCCCAGCCGCACAGATGCGT...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR-3UTR TCA 90 bp TTCGATGTAGGTATTCTCAAACTTAATGAAGTGCAGTCGAGCAGTGATCTCTTCAACCAGGCGGCGCTCTaGGGCAGAATCCTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: FDVGILKLNEVQSSSDLFNQAAL*GRILGK
Trigger: CTTGCCCAGGATTCTGCCTCAGAGCGCCGCCTGGTT...GAAGAGATCACTGCTCGACTGCACTTCATTAAGTTTGAGAATACCTACATCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
3UTR-3UTR TCA 90 bp ATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCTTCTCTTCGATGAGGTCTTTGGATCTCTTCTTGAACTaGAATCTCATAGGGCGGCTC +
Preference number: 2 (lower is better)
Translates to: ITSSLSTFSRSFSSMRSLDLFLN*NLIGRL
Trigger: GAGCCGCCCTATGAGATTTCAGTTCAAGAAGAGATC...CAAAGACCTCATCGAAGAGAAGCTGCGGCTGAAAGTCGACAAGGAGGACGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
3UTR-3UTR CCA 90 bp GACGAGATGGTCTTTGATGAAGTCCAGGCAGGCTTCGATGTAGGTATTCTCAAATCTGAGGCAGAATCCTaGGCAAGAGGGAGGAGCCTA +
Preference number: 2 (lower is better)
Translates to: DEMVFDEVQAGFDVGILKSEAES*ARGRSL
Trigger: TAGGCTCCTCCCTCTTGCCCAGGATTCTGCCTCAGA...TTTGAGAATACCTACATCGAAGCCTGCCTGGACTTCATCAAAGACCATCTCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
3UTR-3UTR TCA 90 bp ATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCTTCTCTTCGATGAGGTCTTTGAGTGCAGTCGAGCAGTaGTCTCTTCTTGAACTGAAA +
Preference number: 2 (lower is better)
Translates to: ITSSLSTFSRSFSSMRSLSAVEQ*SLLELK
Trigger: TTTCAGTTCAAGAAGAGATCACTGCTCGACTGCACT...CAAAGACCTCATCGAAGAGAAGCTGCGGCTGAAAGTCGACAAGGAGGACGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
3UTR-3UTR TCA 90 bp GAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCTCCAGAGCCGATATTaGCAAGAAGATAGGGGAAAA +
Preference number: 2 (lower is better)
Translates to: EVAPLNQARHHVLLVDFQLQSRY*QEDRGK
Trigger: TTTTCCCCTATCTTCTTGTCAATATCGGCTCTGGAG...CTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR-3UTR GCA 90 bp ATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCTTCTCTTCGATGAGGTCTTTGTCAAACTTAATGAAGTaGAGTCGAGCAGTGATCTCT +
Preference number: 2 (lower is better)
Translates to: ITSSLSTFSRSFSSMRSLSNLMK*SRAVIS
Trigger: AGAGATCACTGCTCGACTGCACTTCATTAAGTTTGA...CAAAGACCTCATCGAAGAGAAGCTGCGGCTGAAAGTCGACAAGGAGGACGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
3UTR-3UTR TCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTATAAATACGTTGATTTaGACGCAGTTTCCCTGTGGT +
Preference number: 2 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPINTLI*TQFPCG
Trigger: ACCACAGGGAAACTGCGTTCAAATCAACGTATTTAT...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR TCA 72 bp GGTCGGCGGTGGCCGACTTCCCGAAGCTGCTGGCGATaGGGTTCCCGCTCAGCCCGAGAGTCTGGTGGGCGC +
Preference number: 3 (lower is better)
Translates to: GRRWPTSRSCWR*GSRSARESGGR
Trigger: GCGCCCACCAGACTCTCGGGCTGAGCGGGAACCTCATCGCCAGCAGCTTCGGGAAGTCGGCCACCGCCGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR GCA 72 bp TGTGGGACACCGCGCCGGGCTGGGCTGTGCGCACCCTaGCCTAGTGGAGCTGGCTGTTCGCGCCAGCCTTCA +
Preference number: 3 (lower is better)
Translates to: CGTPRRAGLCAP*PSGAGCSRQPS
Trigger: TGAAGGCTGGCGCGAACAGCCAGCTCCACTAGGGCAGGGTGCGCACAGCCCAGCCCGGCGCGGTGTCCCACA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
3UTR GCA 72 bp GATGACCACCAGATCCGCGCCACGCTCCCGCACCAGTaGGGCCAGCCCCTTATCCAGGCGGCTGAGGTCGAG +
Preference number: 3 (lower is better)
Translates to: DDHQIRATLPHQ*GQPLIQAAEVE
Trigger: CTCGACCTCAGCCGCCTGGATAAGGGGCTGGCCGCACTGGTGCGGGAGCGTGGCGCGGATCTGGTGGTCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
3UTR CCA 72 bp GCAGAGCGCCAAGCCCCCAGAAGGTGCCGCCTCCAATaGAGCTGCCGCCGACCCACTCGAACCTGTCCTCCG +
Preference number: 3 (lower is better)
Translates to: AERQAPRRCRLQ*SCRRPTRTCPP
Trigger: CGGAGGACAGGTTCGAGTGGGTCGGCGGCAGCTCCATTGGAGGCGGCACCTTCTGGGGGCTTGGCGCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR GCA 72 bp CGCCAAGCCCCCAGAAGGTGCCGCCTCCAATGGAGCTaGCGCCGACCCACTCGAACCTGTCCTCCGTCTCCA +
Preference number: 3 (lower is better)
Translates to: RQAPRRCRLQWS*RRPTRTCPPSP
Trigger: TGGAGACGGAGGACAGGTTCGAGTGGGTCGGCGGCAGCTCCATTGGAGGCGGCACCTTCTGGGGGCTTGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR GCA 72 bp CGCCGCCGTAGACGTCCCGCACCAGCATGTCCACATTaGTGTGCTGGCCCCTCGAGGCCAGGTGCAGGAGCT +
Preference number: 3 (lower is better)
Translates to: RRRRRPAPACPH*CAGPSRPGAGA
Trigger: AGCTCCTGCACCTGGCCTCGAGGGGCCAGCACAGCAATGTGGACATGCTGGTGCGGGACGTCTACGGCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR CCA 72 bp GCAGAATCCTGGGCAAGAGGGAGGAGCCTAGGACCGTaGCGACCTCAGGGCCACCCAGCAGGAGCGGAAGCC +
Preference number: 3 (lower is better)
Translates to: AESWARGRSLGP*RPQGHPAGAEA
Trigger: GGCTTCCGCTCCTGCTGGGTGGCCCTGAGGTCGCCACGGTCCTAGGCTCCTCCCTCTTGCCCAGGATTCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
3UTR-3UTR CAA 90 bp CAGCAGCAGCCTCTCTTCCTGGAGCGCAGAGTGCACGACAGGGTCCATGCCCGCAGGGCGGGGCCTGAGTaGCACGCCAGGATGACCTCT +
Preference number: 3 (lower is better)
Translates to: QQQPLFLERRVHDRVHARRAGPE*HARMTS
Trigger: AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCT...GCGGGCATGGACCCTGTCGTGCACTCTGCGCTCCAGGAAGAGAGGCTGCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
3UTR TCA 72 bp CGACAGGGTCCATGCCCGCAATACGCTCTGCCACGATaGGGGACTCGCTGTGGGTCACGTCGTTCAGGGCGG +
Preference number: 3 (lower is better)
Translates to: RQGPCPQYALPR*GTRCGSRRSGR
Trigger: CCGCCCTGAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
3UTR TCA 72 bp GGTAGTTTGTGTGGACAGCACGGCCCATGCCCTCGATaGCCACCAGATCCGCGCCACGCTCCCGCACCAGTG +
Preference number: 3 (lower is better)
Translates to: GSLCGQHGPCPR*PPDPRHAPAPV
Trigger: CACTGGTGCGGGAGCGTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCCGTGCTGTCCACACAAACTACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
3UTR TCA 72 bp TGGCTGTTCGCGCCAGCCTTCAACCAGGCGGCGCTCTaGGGCAGAATCCTGGGCAAGAGGGAGGAGCCTAGG +
Preference number: 3 (lower is better)
Translates to: WLFAPAFNQAAL*GRILGKREEPR
Trigger: CCTAGGCTCCTCCCTCTTGCCCAGGATTCTGCCTCAGAGCGCCGCCTGGTTGAAGGCTGGCGCGAACAGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
3UTR CCA 72 bp CCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTaGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCAC +
Preference number: 3 (lower is better)
Translates to: PAIRSATMRDSL*VTSFRAGPELH
Trigger: GTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
3UTR CCA 72 bp CAGCCTTCAACCAGGCGGCGCTCTGAGGCAGAATCCTaGGCAAGAGGGAGGAGCCTAGGACCGTGGCGACCT +
Preference number: 3 (lower is better)
Translates to: QPSTRRRSEAES*ARGRSLGPWRP
Trigger: AGGTCGCCACGGTCCTAGGCTCCTCCCTCTTGCCCAGGATTCTGCCTCAGAGCGCCGCCTGGTTGAAGGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
3UTR GCA 72 bp TCCAGGCTGTGCAGCCGTGCGTGGAGGCAGGCCAGCTaGCCAATGTCGTTGCTGATCATGTGCAGCAGGCTC +
Preference number: 3 (lower is better)
Translates to: SRLCSRAWRQAS*PMSLLIMCSRL
Trigger: GAGCCTGCTGCACATGATCAGCAACGACATTGGGCAGCTGGCCTGCCTCCACGCACGGCTGCACAGCCTGGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR-3UTR CAA 90 bp ATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCAGGGCGGGGCCTGAGTaGCACGCCAGGATGACCTCT +
Preference number: 3 (lower is better)
Translates to: MPAIRSATMRDSLWVTSFRAGPE*HARMTS
Trigger: AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCT...GAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
3UTR-3UTR CAA 90 bp TTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTGCAGCGCCTCACTCGGCTAGGGCGGGGCCTGAGTaGCACGCCAGGATGACCTCT +
Preference number: 3 (lower is better)
Translates to: FLTSDKQKSPAAAAPHSARAGPE*HARMTS
Trigger: AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCT...AGCCGAGTGAGGCGCTGCAGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
3UTR-3UTR CAA 90 bp GGCAGCTGCAGCGCCTCACTCGGCTGGGACCTCGTACTTGAAGATGACGCTGAAGCCAGCCACGCGTTCTaGATGACGGCCAGCTTGAGG +
Preference number: 3 (lower is better)
Translates to: GSCSASLGWDLVLEDDAEASHAF*MTASLR
Trigger: CCTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGC...TTCAGCGTCATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGCGCTGCAGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
3UTR-3UTR CAA 90 bp AGGCGGCGCTCTGAGGCAGAATCCTGGGCAAGAGGGAGGAGCCTAGGACCGTGGTTCCTACAAAGGGTCTaGAAGGGACACGGCGGAAGG +
Preference number: 3 (lower is better)
Translates to: RRRSEAESWARGRSLGPWFLQRV*KGHGGR
Trigger: CCTTCCGCCGTGTCCCTTCAAGACCCTTTGTAGGAA...CCACGGTCCTAGGCTCCTCCCTCTTGCCCAGGATTCTGCCTCAGAGCGCCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
3UTR-3UTR CAA 90 bp AGCCGTGCGTGGAGGCAGGCCAGCTGCCCAATGTCGTTGCTGATCATGTGCAGCACCAGCATGTCCACATaGCTGTGCTGGCCCCTCGAG +
Preference number: 3 (lower is better)
Translates to: SRAWRQASCPMSLLIMCSTSMST*LCWPLE
Trigger: CTCGAGGGGCCAGCACAGCAATGTGGACATGCTGGT...GCTGCACATGATCAGCAACGACATTGGGCAGCTGGCCTGCCTCCACGCACGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR GCA 72 bp CAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTaGGGCTGGGGTGTATGTGCCGCGTCACAGCAGTAC +
Preference number: 3 (lower is better)
Translates to: QSCVSPLGHTHL*GWGVCAASQQY
Trigger: GTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR CCA 72 bp GCAGAAGAGTCCGGCAGCTGCAGCGCCTCACTCGGCTaGGACCTCGTACTTGAAGATGACGCTGAAGAGCCG +
Preference number: 3 (lower is better)
Translates to: AEESGSCSASLG*DLVLEDDAEEP
Trigger: CGGCTCTTCAGCGTCATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGCGCTGCAGCTGCCGGACTCTTCTGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
3UTR-3UTR CAA 90 bp CCGTGCGTGGAGGCAGGCCAGCTGCCCAATGTCGTTGCTGATCATGTGCAGCAGGTCATCACGTCCTCCTaGTCGACTTTCAGCCGCAGC +
Preference number: 3 (lower is better)
Translates to: PCVEAGQLPNVVADHVQQVITSS*STFSRS
Trigger: GCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGAC...CTGCTGCACATGATCAGCAACGACATTGGGCAGCTGGCCTGCCTCCACGCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR GCA 72 bp AGAGTGCACGACAGGGTCCATGCCCGCAATACGCTCTaGCACGATGAGGGACTCGCTGTGGGTCACGTCGTT +
Preference number: 3 (lower is better)
Translates to: RVHDRVHARNTL*HDEGLAVGHVV
Trigger: AACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGCACTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
3UTR CCA 72 bp TGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTaGGGTGTATGTGCCGCGTCACAGCAGTACCATATA +
Preference number: 3 (lower is better)
Translates to: CVSPLGHTHLCG*GVCAASQQYHI
Trigger: TATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR CCA 72 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTaGGTCACACGCATCTGTGCGGCTGGGGTGTATGTG +
Preference number: 3 (lower is better)
Translates to: MNVSQDKAASRL*VTRICAAGVYV
Trigger: CACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR-3UTR CAA 90 bp CCGTGCGTGGAGGCAGGCCAGCTGCCCAATGTCGTTGCTGATCATGTGCAGCAGAAAATGTGGGGGTGGTaGGTCTGGAACCGGAACTCA +
Preference number: 3 (lower is better)
Translates to: PCVEAGQLPNVVADHVQQKMWGW*VWNRNS
Trigger: TGAGTTCCGGTTCCAGACCAACCACCCCCACATTTT...CTGCTGCACATGATCAGCAACGACATTGGGCAGCTGGCCTGCCTCCACGCACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR-3UTR CAA 90 bp GCCATGTCTTCTTTGGAGAACTCTTGGTCGGCGGTGGCCGACTTCCCGAAGCTGAAAATGTGGGGGTGGTaGGTCTGGAACCGGAACTCA +
Preference number: 3 (lower is better)
Translates to: AMSSLENSWSAVADFPKLKMWGW*VWNRNS
Trigger: TGAGTTCCGGTTCCAGACCAACCACCCCCACATTTT...CAGCTTCGGGAAGTCGGCCACCGCCGACCAAGAGTTCTCCAAAGAAGACATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR GCA 72 bp ATGTCCACATTGCTGTGCTGGCCCCTCGAGGCCAGGTaGAGGAGCTCGTCAAACTTCTTCGTTTTGGTGAGC +
Preference number: 3 (lower is better)
Translates to: MSTLLCWPLEAR*RSSSNFFVLVS
Trigger: GCTCACCAAAACGAAGAAGTTTGACGAGCTCCTGCACCTGGCCTCGAGGGGCCAGCACAGCAATGTGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR GCA 72 bp AGGCAGGCCAGCTGCCCAATGTCGTTGCTGATCATGTaGAGCAGGCTCTTCGCCATGTCTTCTTTGGAGAAC +
Preference number: 3 (lower is better)
Translates to: RQASCPMSLLIM*SRLFAMSSLEN
Trigger: GTTCTCCAAAGAAGACATGGCGAAGAGCCTGCTGCACATGATCAGCAACGACATTGGGCAGCTGGCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR-3UTR CAA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGTATAAATACGTTGATTaGAACGCAGTTTCCCTGTGG +
Preference number: 3 (lower is better)
Translates to: SQDKAASRLWVTRICAAGYKYVD*NAVSLW
Trigger: CCACAGGGAAACTGCGTTCAAATCAACGTATTTATA...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR-3UTR CAA 90 bp GCCATGTCTTCTTTGGAGAACTCTTGGTCGGCGGTGGCCGACTTCCCGAAGCTGACCTTGGTCTCTGTGTaGACGAGATGGTCTTTGATG +
Preference number: 3 (lower is better)
Translates to: AMSSLENSWSAVADFPKLTLVSV*TRWSLM
Trigger: CATCAAAGACCATCTCGTCAACACAGAGACCAAGGT...CAGCTTCGGGAAGTCGGCCACCGCCGACCAAGAGTTCTCCAAAGAAGACATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR GCA 72 bp AATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTaGGTCTCGCCTCTGGGTCACACGCATCTGTGCGGC +
Preference number: 3 (lower is better)
Translates to: NRFQYERLPGQS*VSPLGHTHLCG
Trigger: GCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR GCA 72 bp TCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTaGCGCGTCACAGCAGTACCATATAAATACGTTGAT +
Preference number: 3 (lower is better)
Translates to: SGSHASVRLGCM*RVTAVPYKYVD
Trigger: ATCAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR-3UTR CAA 90 bp GAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCTATAAATACGTTGATTaGAACGCAGTTTCCCTGTGG +
Preference number: 3 (lower is better)
Translates to: ERLPGQSCVSPLGHTHLCYKYVD*NAVSLW
Trigger: CCACAGGGAAACTGCGTTCAAATCAACGTATTTATA...GCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR-3UTR CAA 90 bp GTCCTCCTTGTCGACTTTCAGCCGCAGCTTCTCTTCGATGAGGTCTTTGAACTTGTCGCCTGGATGACCTaGGTCTCTGTGTTGACGAGA +
Preference number: 3 (lower is better)
Translates to: VLLVDFQPQLLFDEVFELVAWMT*VSVLTR
Trigger: TCTCGTCAACACAGAGACCAAGGTCATCCAGGCGAC...AAGTTCAAAGACCTCATCGAAGAGAAGCTGCGGCTGAAAGTCGACAAGGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
3UTR-3UTR CAA 90 bp ATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCTTCTCTTCGATGAGGTCTTTGTTGACGAGATGGTCTTaGATGAAGTCCAGGCAGGCT +
Preference number: 3 (lower is better)
Translates to: ITSSLSTFSRSFSSMRSLLTRWS*MKSRQA
Trigger: AGCCTGCCTGGACTTCATCAAAGACCATCTCGTCAA...CAAAGACCTCATCGAAGAGAAGCTGCGGCTGAAAGTCGACAAGGAGGACGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
3UTR TCA 72 bp GAACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTaGCAAGTGACAAGCAGAAGAGTCCGGCAGCTGCAG +
Preference number: 3 (lower is better)
Translates to: ERSFPVVVKTHS*QVTSRRVRQLQ
Trigger: CTGCAGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR TCA 72 bp AATGAAGTGCAGTCGAGCAGTGATCTCTTCTTGAACTaGAATCTCATAGGGCGGCTCATGTTCACGTTCTGT +
Preference number: 3 (lower is better)
Translates to: NEVQSSSDLFLN*NLIGRLMFTFC
Trigger: ACAGAACGTGAACATGAGCCGCCCTATGAGATTTCAGTTCAAGAAGAGATCACTGCTCGACTGCACTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
3UTR TCA 72 bp GCCGCGTCACAGCAGTACCATATAAATACGTTGATTTaGACGCAGTTTCCCTGTGGTGGTAAAAACACATTC +
Preference number: 3 (lower is better)
Translates to: AASQQYHINTLI*TQFPCGGKNTF
Trigger: GAATGTGTTTTTACCACCACAGGGAAACTGCGTTCAAATCAACGTATTTATATGGTACTGCTGTGACGCGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp GCGCCACGCTCCCGCACCAGTGCGGCCAGCCCCTTATCCAGGCGGCTGAGGTCGCGGGCCGAGCTCGGGTaGTGCACTCATCAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: APRSRTSAASPLSRRLRSRAELG*CTHQPG
Trigger: TCCGGGCTGATGAGTGCATCACCCGAGCTCGGCCCG...CGACCTCAGCCGCCTGGATAAGGGGCTGGCCGCACTGGTGCGGGAGCGTGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp GCGCCACGCTCCCGCACCAGTGCGGCCAGCCCCTTATCCAGGCGGCTGAGGTCGACGCGGTCCAGGCTGTaGAGCCGTGCGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: APRSRTSAASPLSRRLRSTRSRL*SRAWRQ
Trigger: CTGCCTCCACGCACGGCTGCACAGCCTGGACCGCGT...CGACCTCAGCCGCCTGGATAAGGGGCTGGCCGCACTGGTGCGGGAGCGTGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp GCGCCACGCTCCCGCACCAGTGCGGCCAGCCCCTTATCCAGGCGGCTGAGGTCGCGAAGCTGCTGGCGATaGGGTTCCCGCTCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: APRSRTSAASPLSRRLRSRSCWR*GSRSAR
Trigger: TCGGGCTGAGCGGGAACCTCATCGCCAGCAGCTTCG...CGACCTCAGCCGCCTGGATAAGGGGCTGGCCGCACTGGTGCGGGAGCGTGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp GCGCCACGCTCCCGCACCAGTGCGGCCAGCCCCTTATCCAGGCGGCTGAGGTCGTGGCTGGCTCGCCACTaGGCGCTTCACTACCCCGTC +
Preference number: 4 (lower is better)
Translates to: APRSRTSAASPLSRRLRSWLARH*ALHYPV
Trigger: GACGGGGTAGTGAAGCGCGCAGTGGCGAGCCAGCCA...CGACCTCAGCCGCCTGGATAAGGGGCTGGCCGCACTGGTGCGGGAGCGTGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp GCGCCACGCTCCCGCACCAGTGCGGCCAGCCCCTTATCCAGGCGGCTGAGGTCGGAAGAGTCCGGCAGCTaGAGCGCCTCACTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: APRSRTSAASPLSRRLRSEESGS*SASLGW
Trigger: CCAGCCGAGTGAGGCGCTGCAGCTGCCGGACTCTTC...CGACCTCAGCCGCCTGGATAAGGGGCTGGCCGCACTGGTGCGGGAGCGTGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp CGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATGACGGCCAGCTTGAGGCGAAGCTGCTGGCGATaGGGTTCCCGCTCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: RPPSRSASHAFLMTASLRRSCWR*GSRSAR
Trigger: TCGGGCTGAGCGGGAACCTCATCGCCAGCAGCTTCG...CCTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp GTGGACAGCACGGCCCATGCCCTCGATGACCACCAGATCCGCGCCACGCTCCCGGGCCCATGCCCTCGATaGCCACCAGATCCGCGCCAC +
Preference number: 4 (lower is better)
Translates to: VDSTAHALDDHQIRATLPGPCPR*PPDPRH
Trigger: GTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCC...CGGGAGCGTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCCGTGCTGTCCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp CGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATGACGGCCAGCTTGAGGCGCCTCCAATGGAGCTaGCGCCGACCCACTCGAACC +
Preference number: 4 (lower is better)
Translates to: RPPSRSASHAFLMTASLRRLQWS*RRPTRT
Trigger: GGTTCGAGTGGGTCGGCGGCAGCTCCATTGGAGGCG...CCTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp CCGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATGACGGCCAGCTTGAGTGGCTGGCTCGCCACTaGGCGCTTCACTACCCCGTC +
Preference number: 4 (lower is better)
Translates to: PAAQPLGQPRVLDDGQLEWLARH*ALHYPV
Trigger: GACGGGGTAGTGAAGCGCGCAGTGGCGAGCCAGCCA...CTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp CCGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATGACGGCCAGCTTGAGACGCTCCCGCACCAGTaGGGCCAGCCCCTTATCCAG +
Preference number: 4 (lower is better)
Translates to: PAAQPLGQPRVLDDGQLETLPHQ*GQPLIQ
Trigger: CTGGATAAGGGGCTGGCCGCACTGGTGCGGGAGCGT...CTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp GCGCCACGCTCCCGCACCAGTGCGGCCAGCCCCTTATCCAGGCGGCTGAGGTCGACTCTTGGTCGGCGGTaGCCGACTTCCCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: APRSRTSAASPLSRRLRSTLGRR*PTSRSC
Trigger: GCAGCTTCGGGAAGTCGGCCACCGCCGACCAAGAGT...CGACCTCAGCCGCCTGGATAAGGGGCTGGCCGCACTGGTGCGGGAGCGTGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp GTGGACAGCACGGCCCATGCCCTCGATGACCACCAGATCCGCGCCACGCTCCCGCGAGGCACGGGGAGCTaGAGCCCGTCTGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: VDSTAHALDDHQIRATLPRGTGS*SPSAPA
Trigger: TGCTGGTGCAGACGGGCTCCAGCTCCCCGTGCCTCG...CGGGAGCGTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCCGTGCTGTCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp GTGGACAGCACGGCCCATGCCCTCGATGACCACCAGATCCGCGCCACGCTCCCGGTTCAGGGCGGGGCCTaGGTTGCACGCCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: VDSTAHALDDHQIRATLPVQGGA*VARQDD
Trigger: GTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAAC...CGGGAGCGTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCCGTGCTGTCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp GCCCCGCCCCCGGTCGCCTGGATGACCTTGGTCTCTGTGTTGACGAGATGGTCTCCCCGCTGCTCCCGCTaGCGCTCGCTCCACACTCCG +
Preference number: 4 (lower is better)
Translates to: APPPVAWMTLVSVLTRWSPRCSR*RSLHTP
Trigger: CGGAGTGTGGAGCGAGCGGCAGCGGGAGCAGCGGGG...AGACCATCTCGTCAACACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR GCA 90 bp CGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCCCAGACTGTCCCCGCTaGTCCCGCTGCCGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: RLASGSHASVRLGCMCRVPDCPR*SRCRSL
Trigger: GAGCGAGCGGCAGCGGGAGCAGCGGGGACAGTCTGG...GACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CCGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATGACGGCCAGCTTGAGCAAGCCCCCAGAAGGTaGCGCCTCCAATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PAAQPLGQPRVLDDGQLEQAPRR*RLQWSC
Trigger: GCAGCTCCATTGGAGGCGGCACCTTCTGGGGGCTTG...CTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp CTGGCTGTTCGCGCCAGCCTTCAACCAGGCGGCGCTCTGAGGCAGAATCCTGGGGAGAAGCGGCTGCCCTaGCCCGGGTGGCCACAGTGC +
Preference number: 4 (lower is better)
Translates to: LAVRASLQPGGALRQNPGEKRLP*PGWPQC
Trigger: GCACTGTGGCCACCCGGGGCAGGGCAGCCGCTTCTC...CCCAGGATTCTGCCTCAGAGCGCCGCCTGGTTGAAGGCTGGCGCGAACAGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR GCA 90 bp CTGGCTGTTCGCGCCAGCCTTCAACCAGGCGGCGCTCTGAGGCAGAATCCTGGGCGACAGAGAAGCGGCTaGCCTGCCCCGGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LAVRASLQPGGALRQNPGRQRSG*PAPGGH
Trigger: GTGGCCACCCGGGGCAGGGCAGCCGCTTCTCTGTCG...CCCAGGATTCTGCCTCAGAGCGCCGCCTGGTTGAAGGCTGGCGCGAACAGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CCA 90 bp CGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATGACGGCCAGCTTGAGGTCCACATTGCTGTGCTaGCCCCTCGAGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: RPPSRSASHAFLMTASLRSTLLC*PLEARC
Trigger: GCACCTGGCCTCGAGGGGCCAGCACAGCAATGTGGA...CCTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp AGGCGGCGCTCTGAGGCAGAATCCTGGGCAAGAGGGAGGAGCCTAGGACCGTGGGAGGCCGCATGTGTGTaGGACACCGCGCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RRRSEAESWARGRSLGPWEAACV*DTAPGW
Trigger: CCAGCCCGGCGCGGTGTCCCACACACATGCGGCCTC...CCACGGTCCTAGGCTCCTCCCTCTTGCCCAGGATTCTGCCTCAGAGCGCCGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR TCA 90 bp GGCGCCGCCGTAGACGTCCCGCACCAGCATGTCCACATTGCTGTGCTGGCCCCTCGAAGCTGCTGGCGATaGGGTTCCCGCTCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: GAAVDVPHQHVHIAVLAPRSCWR*GSRSAR
Trigger: TCGGGCTGAGCGGGAACCTCATCGCCAGCAGCTTCG...AGGGGCCAGCACAGCAATGTGGACATGCTGGTGCGGGACGTCTACGGCGGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR TCA 90 bp GCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCGGGCCGAGCTCGGGTaGTGCACTCATCAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: ASRLWVTRICAAGVYVPRRAELG*CTHQPG
Trigger: TCCGGGCTGATGAGTGCATCACCCGAGCTCGGCCCG...ACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCGGCCCATGCCCTCGATaGCCACCAGATCCGCGCCAC +
Preference number: 4 (lower is better)
Translates to: RLASGSHASVRLGCMCRVGPCPR*PPDPRH
Trigger: GTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCC...GACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp GCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTGGCCCATGCCCTCGATaGCCACCAGATCCGCGCCAC +
Preference number: 4 (lower is better)
Translates to: ASRLWVTRICAAGVYVPRGPCPR*PPDPRH
Trigger: GTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCC...ACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GCCGCCTCCAATGGAGCTGCCGCCGACCCACTCGAACCTGTCCTCCGTCTCCACCGCCTCCAATGGAGCTaGCGCCGACCCACTCGAACC +
Preference number: 4 (lower is better)
Translates to: AASNGAAADPLEPVLRLHRLQWS*RRPTRT
Trigger: GGTTCGAGTGGGTCGGCGGCAGCTCCATTGGAGGCG...GTGGAGACGGAGGACAGGTTCGAGTGGGTCGGCGGCAGCTCCATTGGAGGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR GCA 90 bp CGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATGACGGCCAGCTTGAGGATGTCCACATTGCTGTaGTGGCCCCTCGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RPPSRSASHAFLMTASLRMSTLL*WPLEAR
Trigger: CCTGGCCTCGAGGGGCCAGCACAGCAATGTGGACAT...CCTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp GGCCCCGCCCCCGGTCGCCTGGATGACCTTGGTCTCTGTGTTGACGAGATGGTCACGCGGTCCAGGCTGTaGAGCCGTGCGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GPAPGRLDDLGLCVDEMVTRSRL*SRAWRQ
Trigger: CTGCCTCCACGCACGGCTGCACAGCCTGGACCGCGT...GACCATCTCGTCAACACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR GCA 90 bp GCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTACGCGGTCCAGGCTGTaGAGCCGTGCGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ASRLWVTRICAAGVYVPRTRSRL*SRAWRQ
Trigger: CTGCCTCCACGCACGGCTGCACAGCCTGGACCGCGT...ACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp ATGCCCTCGATGACCACCAGATCCGCGCCACGCTCCCGCACCAGTGCGGCCAGCTGGTGTCCAGCAGGCTaGGCACGGTCAGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: MPSMTTRSAPRSRTSAASWCPAG*ARSGSH
Trigger: ATGGGACCCTGACCGTGCGCAGCCTGCTGGACACCA...GCTGGCCGCACTGGTGCGGGAGCGTGGCGCGGATCTGGTGGTCATCGAGGGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp GTGTGGACAGCACGGCCCATGCCCTCGATGACCACCAGATCCGCGCCACGCTCCTTCACCAGCGCCAGCTaGCGTTCCTCCCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: VWTARPMPSMTTRSAPRSFTSAS*RSSQPS
Trigger: GCTGGGCTGGGAGGAACGGCAGCTGGCGCTGGTGAA...GGAGCGTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCCGTGCTGTCCACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp GTGTGGACAGCACGGCCCATGCCCTCGATGACCACCAGATCCGCGCCACGCTCCAGGTGCCGCCTCCAATaGAGCTGCCGCCGACCCACT +
Preference number: 4 (lower is better)
Translates to: VWTARPMPSMTTRSAPRSRCRLQ*SCRRPT
Trigger: AGTGGGTCGGCGGCAGCTCCATTGGAGGCGGCACCT...GGAGCGTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCCGTGCTGTCCACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp GTGGACAGCACGGCCCATGCCCTCGATGACCACCAGATCCGCGCCACGCTCCCGTCCACATTGCTGTGCTaGCCCCTCGAGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: VDSTAHALDDHQIRATLPSTLLC*PLEARC
Trigger: GCACCTGGCCTCGAGGGGCCAGCACAGCAATGTGGA...CGGGAGCGTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCCGTGCTGTCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
3UTR CAA 72 bp GCAGCTGCAGCGCCTCACTCGGCTGGGACCTCGTACTaGAAGATGACGCTGAAGAGCCGGCCGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: AAAAPHSAGTSY*KMTLKSRPPSR
Trigger: GCGGCTGGGCGGCCGGCTCTTCAGCGTCATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGCGCTGCAGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp CTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACACGGGCCGAGCTCGGGTaGTGCACTCATCAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: LASGSHASVRLGCMCRVTRAELG*CTHQPG
Trigger: TCCGGGCTGATGAGTGCATCACCCGAGCTCGGCCCG...TGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp GCGCCACGCTCCCGCACCAGTGCGGCCAGCCCCTTATCCAGGCGGCTGAGGTCGCCTCCTCAAAGCAGGTaGGCCAGTATTTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: APRSRTSAASPLSRRLRSPPQSR*ASIFGP
Trigger: TGGCCCGAAAATACTGGCTCACCTGCTTTGAGGAGG...CGACCTCAGCCGCCTGGATAAGGGGCTGGCCGCACTGGTGCGGGAGCGTGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp TCTTCCTGGAGCGCAGAGTGCACGACAGGGTCCATGCCCGCAATACGCTCTGCCGGGTGCGGGGTTACCTaGGGTCGAGGCACGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SSWSAECTTGSMPAIRSAGCGVT*GRGTGS
Trigger: GCTCCCCGTGCCTCGACCTCAGGTAACCCCGCACCC...GGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGCACTCTGCGCTCCAGGAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502512.1
ENST00000625442.1
CDS-3UTR GCA 90 bp CAAGCCCCCAGAAGGTGCCGCCTCCAATGGAGCTGCCGCCGACCCACTCGAACCCAAGCCCCCAGAAGGTaGCGCCTCCAATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QAPRRCRLQWSCRRPTRTQAPRR*RLQWSC
Trigger: GCAGCTCCATTGGAGGCGGCACCTTCTGGGGGCTTG...GGTTCGAGTGGGTCGGCGGCAGCTCCATTGGAGGCGGCACCTTCTGGGGGCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR GCA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAACGCGGTCCAGGCTGTaGAGCCGTGCGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ASGSHASVRLGCMCRVTATRSRL*SRAWRQ
Trigger: CTGCCTCCACGCACGGCTGCACAGCCTGGACCGCGT...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTTTCACCAGCGCCAGCTaGCGTTCCTCCCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ASRLWVTRICAAGVYVPRFTSAS*RSSQPS
Trigger: GCTGGGCTGGGAGGAACGGCAGCTGGCGCTGGTGAA...ACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CTGGCTGTTCGCGCCAGCCTTCAACCAGGCGGCGCTCTGAGGCAGAATCCTGGGCCCGGGTGGCCACAGTaGAGGCTCACCTTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: LAVRASLQPGGALRQNPGPGWPQ*RLTFPE
Trigger: CTCCGGAAAGGTGAGCCTGCACTGTGGCCACCCGGG...CCCAGGATTCTGCCTCAGAGCGCCGCCTGGTTGAAGGCTGGCGCGAACAGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CCA 90 bp GCGCCACGCTCCCGCACCAGTGCGGCCAGCCCCTTATCCAGGCGGCTGAGGTCGGGGAAAATGTGGGGGTaGTTGGTCTGGAACCGGAAC +
Preference number: 4 (lower is better)
Translates to: APRSRTSAASPLSRRLRSGKMWG*LVWNRN
Trigger: GTTCCGGTTCCAGACCAACCACCCCCACATTTTCCC...CGACCTCAGCCGCCTGGATAAGGGGCTGGCCGCACTGGTGCGGGAGCGTGGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp CGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCAGGTGCCGCCTCCAATaGAGCTGCCGCCGACCCACT +
Preference number: 4 (lower is better)
Translates to: RLASGSHASVRLGCMCRVRCRLQ*SCRRPT
Trigger: AGTGGGTCGGCGGCAGCTCCATTGGAGGCGGCACCT...GACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GAGCTGCCGCCGACCCACTCGAACCTGTCCTCCGTCTCCACCTTCACGATGGAGCTGTGCAGCCGTGCGTaGAGGCAGGCCAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ELPPTHSNLSSVSTFTMELCSRA*RQASCP
Trigger: TGGGCAGCTGGCCTGCCTCCACGCACGGCTGCACAG...CTCCATCGTGAAGGTGGAGACGGAGGACAGGTTCGAGTGGGTCGGCGGCAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp CGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATGACGGCCAGCTTGAGGTCAGGAACGCTCCGATaGCTCCCAGGTAGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: RPPSRSASHAFLMTASLRSGTLR*LPGSLR
Trigger: ACGAAGGCTACCTGGGAGCCATCGGAGCGTTCCTGA...CCTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp TCGATGACCACCAGATCCGCGCCACGCTCCCGCACCAGTGCGGCCAGCCCCTTACGGCAGGTCAACCAGTaGCCTCTCCAGCCGGTCCAT +
Preference number: 4 (lower is better)
Translates to: SMTTRSAPRSRTSAASPLRQVNQ*PLQPVH
Trigger: ATGGACCGGCTGGAGAGGCCACTGGTTGACCTGCCG...TAAGGGGCTGGCCGCACTGGTGCGGGAGCGTGGCGCGGATCTGGTGGTCATCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp CTGTGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTCGAGGCACGGGGAGCTaGAGCCCGTCTGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LWVTSFRAGPELHARMTSRGTGS*SPSAPA
Trigger: TGCTGGTGCAGACGGGCTCCAGCTCCCCGTGCCTCG...AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CCA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGCGAGGCACGGGGAGCTaGAGCCCGTCTGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: SQDKAASRLWVTRICAAGRGTGS*SPSAPA
Trigger: TGCTGGTGCAGACGGGCTCCAGCTCCCCGTGCCTCG...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACACGAAGCTGCTGGCGATaGGGTTCCCGCTCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: LASGSHASVRLGCMCRVTRSCWR*GSRSAR
Trigger: TCGGGCTGAGCGGGAACCTCATCGCCAGCAGCTTCG...TGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp TCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGCGGGCCGAGCTCGGGTaGTGCACTCATCAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: SMPAIRSATMRDSLWVTSRAELG*CTHQPG
Trigger: TCCGGGCTGATGAGTGCATCACCCGAGCTCGGCCCG...CGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCACCAGAGCGTCATCGGTaGGGTCCACCGTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: ASGSHASVRLGCMCRVTAPERHR*GPPCRA
Trigger: TGCCCGACACGGTGGACCTCACCGATGACGCTCTGG...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACACCAGAGCGTCATCGGTaGGGTCCACCGTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: LASGSHASVRLGCMCRVTPERHR*GPPCRA
Trigger: TGCCCGACACGGTGGACCTCACCGATGACGCTCTGG...TGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CTGTGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTCCAGAGCGTCATCGGTaGGGTCCACCGTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: LWVTSFRAGPELHARMTSPERHR*GPPCRA
Trigger: TGCCCGACACGGTGGACCTCACCGATGACGCTCTGG...AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp AATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCAGGGCGGGGGCCCATGCCCTCGATaGCCACCAGATCCGCGCCAC +
Preference number: 4 (lower is better)
Translates to: NTLCHDEGLAVGHVVQGGGPCPR*PPDPRH
Trigger: GTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCC...CCCGCCCTGAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp GCTGGGCTGTGCGCACCCTGCCCTAGTGGAGCTGGCTGTTCGCGCCAGCCTTCATGGCGTTCTCCAGGTTaGGGAAGATCTCGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: AGLCAPCPSGAGCSRQPSWRSPG*GRSRRG
Trigger: CCCCCGACGAGATCTTCCGCAACCTGGAGAACGCCA...TGAAGGCTGGCGCGAACAGCCAGCTCCACTAGGGCAGGGTGCGCACAGCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR GCA 90 bp GCGCCACGCTCCCGCACCAGTGCGGCCAGCCCCTTATCCAGGCGGCTGAGGTCGTCGTTGCTGATCATGTaGAGCAGGCTCTTCGCCATG +
Preference number: 4 (lower is better)
Translates to: APRSRTSAASPLSRRLRSSLLIM*SRLFAM
Trigger: CATGGCGAAGAGCCTGCTGCACATGATCAGCAACGA...CGACCTCAGCCGCCTGGATAAGGGGCTGGCCGCACTGGTGCGGGAGCGTGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp ATGCCCTCGATGACCACCAGATCCGCGCCACGCTCCCGCACCAGTGCGGCCAGCTGGAGGCAGGCCAGCTaGCCAATGTCGTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: MPSMTTRSAPRSRTSAASWRQAS*PMSLLI
Trigger: GATCAGCAACGACATTGGGCAGCTGGCCTGCCTCCA...GCTGGCCGCACTGGTGCGGGAGCGTGGCGCGGATCTGGTGGTCATCGAGGGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp AATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCAGGGCGGGACGCGGTCCAGGCTGTaGAGCCGTGCGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: NTLCHDEGLAVGHVVQGGTRSRL*SRAWRQ
Trigger: CTGCCTCCACGCACGGCTGCACAGCCTGGACCGCGT...CCCGCCCTGAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp CTGTGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTTTCACCAGCGCCAGCTaGCGTTCCTCCCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LWVTSFRAGPELHARMTSFTSAS*RSSQPS
Trigger: GCTGGGCTGGGAGGAACGGCAGCTGGCGCTGGTGAA...AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR GCA 90 bp CTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAACGCTCCCGCACCAGTaGGGCCAGCCCCTTATCCAG +
Preference number: 4 (lower is better)
Translates to: LASGSHASVRLGCMCRVTTLPHQ*GQPLIQ
Trigger: CTGGATAAGGGGCTGGCCGCACTGGTGCGGGAGCGT...TGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGACGCTCCCGCACCAGTaGGGCCAGCCCCTTATCCAG +
Preference number: 4 (lower is better)
Translates to: SQDKAASRLWVTRICAAGTLPHQ*GQPLIQ
Trigger: CTGGATAAGGGGCTGGCCGCACTGGTGCGGGAGCGT...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GATGAGGTCTTTGAACTTGTAGGCCCCGCCCCCGGTCGCCTGGATGACCTTGGTCGACAGAGAAGCGGCTaGCCTGCCCCGGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: DEVFELVGPAPGRLDDLGRQRSG*PAPGGH
Trigger: GTGGCCACCCGGGGCAGGGCAGCCGCTTCTCTGTCG...ACCAAGGTCATCCAGGCGACCGGGGGCGGGGCCTACAAGTTCAAAGACCTCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CCA 90 bp GATGACGCTGAAGAGCCGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATTGGGGGTGGTTGGTCTaGAACCGGAACTCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: DDAEEPAAQPLGQPRVLDWGWLV*NRNSGS
Trigger: CGACCCTGAGTTCCGGTTCCAGACCAACCACCCCCA...ATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCGGCTCTTCAGCGTCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp TGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTGTCAGGTGCCGCCTCCAATaGAGCTGCCGCCGACCCACT +
Preference number: 4 (lower is better)
Translates to: WVTSFRAGPELHARMTSVRCRLQ*SCRRPT
Trigger: AGTGGGTCGGCGGCAGCTCCATTGGAGGCGGCACCT...GACAGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp AGGTGCCGCCTCCAATGGAGCTGCCGCCGACCCACTCGAACCTGTCCTCCGTCTACTCTTGGTCGGCGGTaGCCGACTTCCCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RCRLQWSCRRPTRTCPPSTLGRR*PTSRSC
Trigger: GCAGCTTCGGGAAGTCGGCCACCGCCGACCAAGAGT...AGACGGAGGACAGGTTCGAGTGGGTCGGCGGCAGCTCCATTGGAGGCGGCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp GACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCTGTGCAGCCGTGCGTaGAGGCAGGCCAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: DRVHARNTLCHDEGLAVGLCSRA*RQASCP
Trigger: TGGGCAGCTGGCCTGCCTCCACGCACGGCTGCACAG...ACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp CGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCTCCACAGAGTCTGGCTaGCTCGCCACTGCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: RLASGSHASVRLGCMCRVSTESG*LATARF
Trigger: GAAGCGCGCAGTGGCGAGCCAGCCAGACTCTGTGGA...GACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTTCCACAGAGTCTGGCTaGCTCGCCACTGCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: ASRLWVTRICAAGVYVPRSTESG*LATARF
Trigger: GAAGCGCGCAGTGGCGAGCCAGCCAGACTCTGTGGA...ACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TCGATGACCACCAGATCCGCGCCACGCTCCCGCACCAGTGCGGCCAGCCCCTTATCAGACAGTGCTCCCTaGTGTCCAGCAGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: SMTTRSAPRSRTSAASPLSDSAP*CPAGCA
Trigger: TGCGCAGCCTGCTGGACACCAGGGAGCACTGTCTGA...TAAGGGGCTGGCCGCACTGGTGCGGGAGCGTGGCGCGGATCTGGTGGTCATCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp CGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATGACGGCCAGCTTGAGGCCCGCTGCTTCACTTTaGAGTAGGGATCCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RPPSRSASHAFLMTASLRPAASL*SRDPGS
Trigger: ACTTCCCGGATCCCTACTCCAAAGTGAAGCAGCGGG...CCTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp GTGTGGACAGCACGGCCCATGCCCTCGATGACCACCAGATCCGCGCCACGCTCCATGAGGGACTCGCTGTaGGTCACGTCGTTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: VWTARPMPSMTTRSAPRSMRDSL*VTSFRA
Trigger: CGCCCTGAACGACGTGACCCACAGCGAGTCCCTCAT...GGAGCGTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCCGTGCTGTCCACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp ACGACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGCGAGGCACGGGGAGCTaGAGCCCGTCTGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: TTGSMPAIRSATMRDSLWRGTGS*SPSAPA
Trigger: TGCTGGTGCAGACGGGCTCCAGCTCCCCGTGCCTCG...CCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CCA 90 bp GCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTGGGTCGGAATCCTTCTaGTACACGAAGGCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: ASRLWVTRICAAGVYVPRGSESF*YTKAPP
Trigger: GGGCGGGGCCTTCGTGTACCAGAAGGATTCCGACCC...ACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435556.8
ENST00000630982.2
CDS-3UTR TCA 90 bp ATGCCCTCGATGACCACCAGATCCGCGCCACGCTCCCGCACCAGTGCGGCCAGCCATGGGGGATGTTCTTaGGCACGAAGTTGCACCCCT +
Preference number: 4 (lower is better)
Translates to: MPSMTTRSAPRSRTSAASHGGCS*ARSCTP
Trigger: AGGGGTGCAACTTCGTGCTCAAGAACATCCCCCATG...GCTGGCCGCACTGGTGCGGGAGCGTGGCGCGGATCTGGTGGTCATCGAGGGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp TCGATGACCACCAGATCCGCGCCACGCTCCCGCACCAGTGCGGCCAGCCCCTTAACTTCTTCGTTTTGGTaGGCAGAGCGCCAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: SMTTRSAPRSRTSAASPLTSSFW*AERQAP
Trigger: GGGGGCTTGGCGCTCTGCTCACCAAAACGAAGAAGT...TAAGGGGCTGGCCGCACTGGTGCGGGAGCGTGGCGCGGATCTGGTGGTCATCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp CGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATGACGGCCAGCTTGAGGAGGGATCCGGGAAGTTaGACTCGTTCAGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: RPPSRSASHAFLMTASLRRDPGS*TRSDSA
Trigger: AGCACTGTCTGAACGAGTTCAACTTCCCGGATCCCT...CCTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp TCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGGTTCAGGGCGGGGCCTaGGTTGCACGCCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: SMPAIRSATMRDSLWVTSVQGGA*VARQDD
Trigger: GTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAAC...CGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR TCA 90 bp AATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCAGGGCGGGGTTCAGGGCGGGGCCTaGGTTGCACGCCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: NTLCHDEGLAVGHVVQGGVQGGA*VARQDD
Trigger: GTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAAC...CCCGCCCTGAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR TCA 90 bp GTGGAGCTGGCTGTTCGCGCCAGCCTTCAACCAGGCGGCGCTCTGAGGCAGAATAACCAGGCGGCGCTCTaGGGCAGAATCCTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: VELAVRASLQPGGALRQNNQAAL*GRILGK
Trigger: CTTGCCCAGGATTCTGCCTCAGAGCGCCGCCTGGTT...ATTCTGCCTCAGAGCGCCGCCTGGTTGAAGGCTGGCGCGAACAGCCAGCTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR GCA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTCCCCGCTGCTCCCGCTaGCGCTCGCTCCACACTCCG +
Preference number: 4 (lower is better)
Translates to: MNVSQDKAASRLWVTRICPRCSR*RSLHTP
Trigger: CGGAGTGTGGAGCGAGCGGCAGCGGGAGCAGCGGGG...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATACCAGACTGTCCCCGCTaGTCCCGCTGCCGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: VTRICAAGVYVPRHSSTIPDCPR*SRCRSL
Trigger: GAGCGAGCGGCAGCGGGAGCAGCGGGGACAGTCTGG...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTTGGCGTTCTCCAGGTTaGGGAAGATCTCGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: ASRLWVTRICAAGVYVPRWRSPG*GRSRRG
Trigger: CCCCCGACGAGATCTTCCGCAACCTGGAGAACGCCA...ACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp ACGACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGCGCCTCCAATGGAGCTaGCGCCGACCCACTCGAACC +
Preference number: 4 (lower is better)
Translates to: TTGSMPAIRSATMRDSLWRLQWS*RRPTRT
Trigger: GGTTCGAGTGGGTCGGCGGCAGCTCCATTGGAGGCG...CCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp CTGTGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTCAAGCCCCCAGAAGGTaGCGCCTCCAATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LWVTSFRAGPELHARMTSQAPRR*RLQWSC
Trigger: GCAGCTCCATTGGAGGCGGCACCTTCTGGGGGCTTG...AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp CTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACACAAGCCCCCAGAAGGTaGCGCCTCCAATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LASGSHASVRLGCMCRVTQAPRR*RLQWSC
Trigger: GCAGCTCCATTGGAGGCGGCACCTTCTGGGGGCTTG...TGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CAGCAGCAGCCTCTCTTCCTGGAGCGCAGAGTGCACGACAGGGTCCATGCCCGCATGTCCACATTGCTGTaGTGGCCCCTCGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QQQPLFLERRVHDRVHARMSTLL*WPLEAR
Trigger: CCTGGCCTCGAGGGGCCAGCACAGCAATGTGGACAT...GCGGGCATGGACCCTGTCGTGCACTCTGCGCTCCAGGAAGAGAGGCTGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp TCCCGCACCAGCATGTCCACATTGCTGTGCTGGCCCCTCGAGGCCAGGTGCAGGCCAGCATGTCCACATTaGTGTGCTGGCCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: SRTSMSTLLCWPLEARCRPACPH*CAGPSR
Trigger: CCTCGAGGGGCCAGCACAGCAATGTGGACATGCTGG...CCTGCACCTGGCCTCGAGGGGCCAGCACAGCAATGTGGACATGCTGGTGCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR GCA 90 bp TCGATGACCACCAGATCCGCGCCACGCTCCCGCACCAGTGCGGCCAGCCCCTTATGGAGGCAGGCCAGCTaGCCAATGTCGTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: SMTTRSAPRSRTSAASPLWRQAS*PMSLLI
Trigger: GATCAGCAACGACATTGGGCAGCTGGCCTGCCTCCA...TAAGGGGCTGGCCGCACTGGTGCGGGAGCGTGGCGCGGATCTGGTGGTCATCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCACTCCGCCCTCTCGGCTaGATCCACAGAGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ASGSHASVRLGCMCRVTALRPLG*IHRVWL
Trigger: CAGCCAGACTCTGTGGATGCAGCCGAGAGGGCGGAG...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CTGTGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTTGGTGTCCAGCAGGCTaGGCACGGTCAGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: LWVTSFRAGPELHARMTSWCPAG*ARSGSH
Trigger: ATGGGACCCTGACCGTGCGCAGCCTGCTGGACACCA...AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR GCA 90 bp ATGCCCTCGATGACCACCAGATCCGCGCCACGCTCCCGCACCAGTGCGGCCAGCAACTCGTTCAGACAGTaGTCCCTGGTGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: MPSMTTRSAPRSRTSAASNSFRQ*SLVSSR
Trigger: CCTGCTGGACACCAGGGAGCACTGTCTGAACGAGTT...GCTGGCCGCACTGGTGCGGGAGCGTGGCGCGGATCTGGTGGTCATCGAGGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp AATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCAGGGCGGGTTCACCAGCGCCAGCTaGCGTTCCTCCCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: NTLCHDEGLAVGHVVQGGFTSAS*RSSQPS
Trigger: GCTGGGCTGGGAGGAACGGCAGCTGGCGCTGGTGAA...CCCGCCCTGAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR GCA 90 bp ACGACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGTTCACCAGCGCCAGCTaGCGTTCCTCCCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TTGSMPAIRSATMRDSLWFTSAS*RSSQPS
Trigger: GCTGGGCTGGGAGGAACGGCAGCTGGCGCTGGTGAA...CCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR GCA 90 bp GCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTGCCCGCAATACGCTCTaGCACGATGAGGGACTCGCT +
Preference number: 4 (lower is better)
Translates to: ASRLWVTRICAAGVYVPRARNTL*HDEGLA
Trigger: AGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGC...ACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCGCCCGCAATACGCTCTaGCACGATGAGGGACTCGCT +
Preference number: 4 (lower is better)
Translates to: RLASGSHASVRLGCMCRVARNTL*HDEGLA
Trigger: AGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGC...GACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCGCACGACAGGGTCCATaGCCGCAATACGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: RLASGSHASVRLGCMCRVARQGP*PQYALP
Trigger: TGGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGC...GACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGACGCTCCCGCACCAGTaGGGCCAGCCCCTTATCCAG +
Preference number: 4 (lower is better)
Translates to: SMPAIRSATMRDSLWVTSTLPHQ*GQPLIQ
Trigger: CTGGATAAGGGGCTGGCCGCACTGGTGCGGGAGCGT...CGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp ACGACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGAAGAGTCCGGCAGCTaGAGCGCCTCACTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: TTGSMPAIRSATMRDSLWEESGS*SASLGW
Trigger: CCAGCCGAGTGAGGCGCTGCAGCTGCCGGACTCTTC...CCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGGTGCGTGCCCACGGTaGTGCGTCCCGTCAGACATA +
Preference number: 4 (lower is better)
Translates to: ASGSHASVRLGCMCRVTAGACPR*CVPSDI
Trigger: TATGTCTGACGGGACGCAGCACCGTGGGCACGCACC...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GCCCCGCCCCCGGTCGCCTGGATGACCTTGGTCTCTGTGTTGACGAGATGGTCTTCCACATTGCTGTGCTaGCCCCTCGAGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: APPPVAWMTLVSVLTRWSSTLLC*PLEARC
Trigger: GCACCTGGCCTCGAGGGGCCAGCACAGCAATGTGGA...AGACCATCTCGTCAACACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGTCCACATTGCTGTGCTaGCCCCTCGAGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SQDKAASRLWVTRICAAGSTLLC*PLEARC
Trigger: GCACCTGGCCTCGAGGGGCCAGCACAGCAATGTGGA...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTGTCACTCTTGGTCGGCGGTaGCCGACTTCCCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: WVTSFRAGPELHARMTSVTLGRR*PTSRSC
Trigger: GCAGCTTCGGGAAGTCGGCCACCGCCGACCAAGAGT...GACAGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAACTCTTGGTCGGCGGTaGCCGACTTCCCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: ASGSHASVRLGCMCRVTATLGRR*PTSRSC
Trigger: GCAGCTTCGGGAAGTCGGCCACCGCCGACCAAGAGT...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACACGGCAGGTCAACCAGTaGCCTCTCCAGCCGGTCCAT +
Preference number: 4 (lower is better)
Translates to: LASGSHASVRLGCMCRVTRQVNQ*PLQPVH
Trigger: ATGGACCGGCTGGAGAGGCCACTGGTTGACCTGCCG...TGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGCGGCAGGTCAACCAGTaGCCTCTCCAGCCGGTCCAT +
Preference number: 4 (lower is better)
Translates to: SQDKAASRLWVTRICAAGRQVNQ*PLQPVH
Trigger: ATGGACCGGCTGGAGAGGCCACTGGTTGACCTGCCG...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCATCCACAGAGTCTGGCTaGCTCGCCACTGCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: ASGSHASVRLGCMCRVTASTESG*LATARF
Trigger: GAAGCGCGCAGTGGCGAGCCAGCCAGACTCTGTGGA...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CACTCGGCTGGGACCTCGTACTTGAAGATGACGCTGAAGAGCCGGCCGCCCAGCTCCACAGAGTCTGGCTaGCTCGCCACTGCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: HSAGTSYLKMTLKSRPPSSTESG*LATARF
Trigger: GAAGCGCGCAGTGGCGAGCCAGCCAGACTCTGTGGA...GCTGGGCGGCCGGCTCTTCAGCGTCATCTTCAAGTACGAGGTCCCAGCCGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp CGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCATGAGGGACTCGCTGTaGGTCACGTCGTTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RLASGSHASVRLGCMCRVMRDSL*VTSFRA
Trigger: CGCCCTGAACGACGTGACCCACAGCGAGTCCCTCAT...GACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTATGAGGGACTCGCTGTaGGTCACGTCGTTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: ASRLWVTRICAAGVYVPRMRDSL*VTSFRA
Trigger: CGCCCTGAACGACGTGACCCACAGCGAGTCCCTCAT...ACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCTGCGTCTCGCCTCTaGGTCACACGCATCTGTGCG +
Preference number: 4 (lower is better)
Translates to: LASGSHASVRLGCMCRVTAASRL*VTRICA
Trigger: CGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGC...TGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGCTGCGTCTCGCCTCTaGGTCACACGCATCTGTGCG +
Preference number: 4 (lower is better)
Translates to: SQDKAASRLWVTRICAAGAASRL*VTRICA
Trigger: CGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGC...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp GAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCCGAAGCTGCTGGCGATaGGGTTCCCGCTCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: ERLPGQSCVSPLGHTHLCRSCWR*GSRSAR
Trigger: TCGGGCTGAGCGGGAACCTCATCGCCAGCAGCTTCG...GCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCATACGCTCTGCCACGATaGGGGACTCGCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: ASGSHASVRLGCMCRVTAYALPR*GTRCGS
Trigger: TGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTA...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp GCCTCACTCGGCTGGGACCTCGTACTTGAAGATGACGCTGAAGAGCCGGCCGCCTACGCTCTGCCACGATaGGGGACTCGCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: ASLGWDLVLEDDAEEPAAYALPR*GTRCGS
Trigger: TGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTA...GGCGGCCGGCTCTTCAGCGTCATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp AGCCCAGGAGGGAGAGAACAGGTGCAGGGTGCGGGGTTACCTGAGGTCGAGGCATACGCTCTGCCACGATaGGGGACTCGCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SPGGREQVQGAGLPEVEAYALPR*GTRCGS
Trigger: TGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTA...TGCCTCGACCTCAGGTAACCCCGCACCCTGCACCTGTTCTCTCCCTCCTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502512.1
ENST00000625442.1
CDS-3UTR TCA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGTACGCTCTGCCACGATaGGGGACTCGCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SQDKAASRLWVTRICAAGYALPR*GTRCGS
Trigger: TGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTA...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp ATGCCCTCGATGACCACCAGATCCGCGCCACGCTCCCGCACCAGTGCGGCCAGCCACATTCCTGACAAGTaGCAAGCAGAAGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: MPSMTTRSAPRSRTSAASHIPDK*QAEESG
Trigger: GCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTG...GCTGGCCGCACTGGTGCGGGAGCGTGGCGCGGATCTGGTGGTCATCGAGGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGCCCCTCGAGGCCAGGTaGAGGAGCTCGTCAAACTTC +
Preference number: 4 (lower is better)
Translates to: SQDKAASRLWVTRICAAGPLEAR*RSSSNF
Trigger: GAAGTTTGACGAGCTCCTGCACCTGGCCTCGAGGGG...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCACCCCTCGAGGCCAGGTaGAGGAGCTCGTCAAACTTC +
Preference number: 4 (lower is better)
Translates to: ASGSHASVRLGCMCRVTAPLEAR*RSSSNF
Trigger: GAAGTTTGACGAGCTCCTGCACCTGGCCTCGAGGGG...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GCCTCACTCGGCTGGGACCTCGTACTTGAAGATGACGCTGAAGAGCCGGCCGCCCCCCTCGAGGCCAGGTaGAGGAGCTCGTCAAACTTC +
Preference number: 4 (lower is better)
Translates to: ASLGWDLVLEDDAEEPAAPLEAR*RSSSNF
Trigger: GAAGTTTGACGAGCTCCTGCACCTGGCCTCGAGGGG...GGCGGCCGGCTCTTCAGCGTCATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp CTGTGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTCCAGCATGTCCACATTaGTGTGCTGGCCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: LWVTSFRAGPELHARMTSPACPH*CAGPSR
Trigger: CCTCGAGGGGCCAGCACAGCAATGTGGACATGCTGG...AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp TCTTCCTGGAGCGCAGAGTGCACGACAGGGTCCATGCCCGCAATACGCTCTGCCCTCCGCCCTCTCGGCTaGATCCACAGAGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSWSAECTTGSMPAIRSALRPLG*IHRVWL
Trigger: CAGCCAGACTCTGTGGATGCAGCCGAGAGGGCGGAG...GGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGCACTCTGCGCTCCAGGAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp AATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCAGGGCGGGTGGTGTCCAGCAGGCTaGGCACGGTCAGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: NTLCHDEGLAVGHVVQGGWCPAG*ARSGSH
Trigger: ATGGGACCCTGACCGTGCGCAGCCTGCTGGACACCA...CCCGCCCTGAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR GCA 90 bp TCTTCCTGGAGCGCAGAGTGCACGACAGGGTCCATGCCCGCAATACGCTCTGCCTGGTGTCCAGCAGGCTaGGCACGGTCAGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: SSWSAECTTGSMPAIRSAWCPAG*ARSGSH
Trigger: ATGGGACCCTGACCGTGCGCAGCCTGCTGGACACCA...GGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGCACTCTGCGCTCCAGGAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR GCA 90 bp GTGTGGACAGCACGGCCCATGCCCTCGATGACCACCAGATCCGCGCCACGCTCCAACTCGTTCAGACAGTaGTCCCTGGTGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VWTARPMPSMTTRSAPRSNSFRQ*SLVSSR
Trigger: CCTGCTGGACACCAGGGAGCACTGTCTGAACGAGTT...GGAGCGTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCCGTGCTGTCCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp GAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCTTCACCAGCGCCAGCTaGCGTTCCTCCCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ERLPGQSCVSPLGHTHLCFTSAS*RSSQPS
Trigger: GCTGGGCTGGGAGGAACGGCAGCTGGCGCTGGTGAA...GCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCACTCGCAGCGCAGGGCTaGGTGGTAGTTTGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: ASGSHASVRLGCMCRVTALAAQG*VVVCVD
Trigger: GTCCACACAAACTACCACGCAGCCCTGCGCTGCGAG...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GAGGCTCTCGCAGCGCAGGGCTGCGTGGTAGTTTGTGTGGACAGCACGGCCCATCTCGCAGCGCAGGGCTaGGTGGTAGTTTGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: EALAAQGCVVVCVDSTAHLAAQG*VVVCVD
Trigger: GTCCACACAAACTACCACGCAGCCCTGCGCTGCGAG...ATGGGCCGTGCTGTCCACACAAACTACCACGCAGCCCTGCGCTGCGAGAGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGGTCACACGCATCTGTaGGGCTGGGGTGTATGTGCC +
Preference number: 4 (lower is better)
Translates to: SQDKAASRLWVTRICAAGGHTHL*GWGVCA
Trigger: GGCACATACACCCCAGCCGCACAGATGCGTGTGACC...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCACTCCCAGGACAAAGCTaGGTCTCGCCTCTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: ASGSHASVRLGCMCRVTALPGQS*VSPLGH
Trigger: GTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAG...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAACTCTATTTGGTGCGTaGCCACGGTGCTGCGTCCCG +
Preference number: 4 (lower is better)
Translates to: LASGSHASVRLGCMCRVTTLFGA*PRCCVP
Trigger: CGGGACGCAGCACCGTGGGCACGCACCAAATAGAGT...TGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp AGGTTCCTACAAAGGGTCTTGAAGGGACACGGCGGAAGGCAGGGGAGGCTGTCCGGGCCTGGGGGTCCATaGCCCACACTCTCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RFLQRVLKGHGGRQGRLSGPGGP*PTLSGC
Trigger: ACACCCAGAGAGTGTGGGGCATGGACCCCCAGGCCC...GGACAGCCTCCCCTGCCTTCCGCCGTGTCCCTTCAAGACCCTTTGTAGGAACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR GCA 90 bp GGCCCCGCCCCCGGTCGCCTGGATGACCTTGGTCTCTGTGTTGACGAGATGGTCCAGCAGAGGGATGACTaGGAGACAAGTGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GPAPGRLDDLGLCVDEMVQQRDD*ETSARS
Trigger: GGACCTGGCACTTGTCTCGCAGTCATCCCTCTGCTG...GACCATCTCGTCAACACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CCA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGCGATGGCGAAGCGCTTaGCGTTCTCCAGGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: SQDKAASRLWVTRICAAGRWRSA*RSPGCG
Trigger: TCCGCAACCTGGAGAACGCCAAGCGCTTCGCCATCG...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CAAGCCCCCAGAAGGTGCCGCCTCCAATGGAGCTGCCGCCGACCCACTCGAACCGGGAAAATGTGGGGGTaGTTGGTCTGGAACCGGAAC +
Preference number: 4 (lower is better)
Translates to: QAPRRCRLQWSCRRPTRTGKMWG*LVWNRN
Trigger: GTTCCGGTTCCAGACCAACCACCCCCACATTTTCCC...GGTTCGAGTGGGTCGGCGGCAGCTCCATTGGAGGCGGCACCTTCTGGGGGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp CGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATGACGGCCAGCTTGAGGTCTCCACCTTCACGATaGAGACTCCAGAGCCGATAT +
Preference number: 4 (lower is better)
Translates to: RPPSRSASHAFLMTASLRSPPSR*RLQSRY
Trigger: ATATCGGCTCTGGAGTCTCCATCGTGAAGGTGGAGA...CCTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp GCCGCCTCCAATGGAGCTGCCGCCGACCCACTCGAACCTGTCCTCCGTCTCCACTCTTTGGAGAACTCTTaGTCGGCGGTGGCCGACTTC +
Preference number: 4 (lower is better)
Translates to: AASNGAAADPLEPVLRLHSLENS*SAVADF
Trigger: GAAGTCGGCCACCGCCGACCAAGAGTTCTCCAAAGA...GTGGAGACGGAGGACAGGTTCGAGTGGGTCGGCGGCAGCTCCATTGGAGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp ACATTGCTGTGCTGGCCCCTCGAGGCCAGGTGCAGGAGCTCGTCAAACTTCTTCCTGTGCAGCCGTGCGTaGAGGCAGGCCAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: TLLCWPLEARCRSSSNFFLCSRA*RQASCP
Trigger: TGGGCAGCTGGCCTGCCTCCACGCACGGCTGCACAG...GAAGAAGTTTGACGAGCTCCTGCACCTGGCCTCGAGGGGCCAGCACAGCAATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp CTGTGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTCGCATGGTCACGGGGTaGCCCCGGATAAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: LWVTSFRAGPELHARMTSRMVTG*PRIKKP
Trigger: AGGCTTCTTTATCCGGGGCCACCCCGTGACCATGCG...AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGCGCATGGTCACGGGGTaGCCCCGGATAAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SQDKAASRLWVTRICAAGRMVTG*PRIKKP
Trigger: AGGCTTCTTTATCCGGGGCCACCCCGTGACCATGCG...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCTCAGGAACGCTCCGATaGCTCCCAGGTAGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: RLASGSHASVRLGCMCRVSGTLR*LPGSLR
Trigger: ACGAAGGCTACCTGGGAGCCATCGGAGCGTTCCTGA...GACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp ACGACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGTCCACAGAGTCTGGCTaGCTCGCCACTGCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: TTGSMPAIRSATMRDSLWSTESG*LATARF
Trigger: GAAGCGCGCAGTGGCGAGCCAGCCAGACTCTGTGGA...CCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCATCAGACAGTGCTCCCTaGTGTCCAGCAGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: ASGSHASVRLGCMCRVTASDSAP*CPAGCA
Trigger: TGCGCAGCCTGCTGGACACCAGGGAGCACTGTCTGA...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GAGGCTCTCGCAGCGCAGGGCTGCGTGGTAGTTTGTGTGGACAGCACGGCCCATATGAGGGACTCGCTGTaGGTCACGTCGTTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: EALAAQGCVVVCVDSTAHMRDSL*VTSFRA
Trigger: CGCCCTGAACGACGTGACCCACAGCGAGTCCCTCAT...ATGGGCCGTGCTGTCCACACAAACTACCACGCAGCCCTGCGCTGCGAGAGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGATGAGGGACTCGCTGTaGGTCACGTCGTTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: SQDKAASRLWVTRICAAGMRDSL*VTSFRA
Trigger: CGCCCTGAACGACGTGACCCACAGCGAGTCCCTCAT...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GTGTGGACAGCACGGCCCATGCCCTCGATGACCACCAGATCCGCGCCACGCTCCAGCGCCTCACTCGGCTaGGACCTCGTACTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: VWTARPMPSMTTRSAPRSSASLG*DLVLED
Trigger: ATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGCGCT...GGAGCGTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCCGTGCTGTCCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp GCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCTGCCCTGCCCCGGGTaGCCACAGTGCAGGCTCACC +
Preference number: 4 (lower is better)
Translates to: APLNQARHHVLLVDFQPQLPCPG*PQCRLT
Trigger: GGTGAGCCTGCACTGTGGCCACCCGGGGCAGGGCAG...CTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CCA 90 bp CCCCCGGTCGCCTGGATGACCTTGGTCTCTGTGTTGACGAGATGGTCTTTGATGCTGCCCTGCCCCGGGTaGCCACAGTGCAGGCTCACC +
Preference number: 4 (lower is better)
Translates to: PPVAWMTLVSVLTRWSLMLPCPG*PQCRLT
Trigger: GGTGAGCCTGCACTGTGGCCACCCGGGGCAGGGCAG...CATCAAAGACCATCTCGTCAACACAGAGACCAAGGTCATCCAGGCGACCGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR TCA 90 bp CTGTGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTACTTCTTCGTTTTGGTaGGCAGAGCGCCAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LWVTSFRAGPELHARMTSTSSFW*AERQAP
Trigger: GGGGGCTTGGCGCTCTGCTCACCAAAACGAAGAAGT...AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp GCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTGCCCAATGTCGTTGCTaGTCATGTGCAGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ASRLWVTRICAAGVYVPRAQCRC*SCAAGS
Trigger: AGAGCCTGCTGCACATGATCAGCAACGACATTGGGC...ACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATAGTTCAGGGCGGGGCCTaGGTTGCACGCCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: VTRICAAGVYVPRHSSTIVQGGA*VARQDD
Trigger: GTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAAC...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp TCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTACGCTCTGCCACGATaGGGGACTCGCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SMPAIRSATMRDSLWVTSYALPR*GTRCGS
Trigger: TGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTA...CGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR GCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCCCCGCTGCTCCCGCTaGCGCTCGCTCCACACTCCG +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDPRCSR*RSLHTP
Trigger: CGGAGTGTGGAGCGAGCGGCAGCGGGAGCAGCGGGG...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GAGCACGAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACCCAGACTGTCCCCGCTaGTCCCGCTGCCGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: EHEVAPLNQARHHVLLVDPDCPR*SRCRSL
Trigger: GAGCGAGCGGCAGCGGGAGCAGCGGGGACAGTCTGG...GTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR GCA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATCCAGACTGTCCCCGCTaGTCCCGCTGCCGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYPDCPR*SRCRSL
Trigger: GAGCGAGCGGCAGCGGGAGCAGCGGGGACAGTCTGG...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GAGGCTCTCGCAGCGCAGGGCTGCGTGGTAGTTTGTGTGGACAGCACGGCCCATTCATCAGCCCGGAGCTaGCTGCATAGTTCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: EALAAQGCVVVCVDSTAHSSARS*LHSSLP
Trigger: GGGGAGAGAACTATGCAGGCAGCTCCGGGCTGATGA...ATGGGCCGTGCTGTCCACACAAACTACCACGCAGCCCTGCGCTGCGAGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp GCCTCACTCGGCTGGGACCTCGTACTTGAAGATGACGCTGAAGAGCCGGCCGCCTCATCAGCCCGGAGCTaGCTGCATAGTTCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: ASLGWDLVLEDDAEEPAASSARS*LHSSLP
Trigger: GGGGAGAGAACTATGCAGGCAGCTCCGGGCTGATGA...GGCGGCCGGCTCTTCAGCGTCATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp GGCAGCTGCAGCGCCTCACTCGGCTGGGACCTCGTACTTGAAGATGACGCTGAACTCCGCCCTCTCGGCTaGATCCACAGAGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GSCSASLGWDLVLEDDAELRPLG*IHRVWL
Trigger: CAGCCAGACTCTGTGGATGCAGCCGAGAGGGCGGAG...TTCAGCGTCATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGCGCTGCAGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp TCTTCCTGGAGCGCAGAGTGCACGACAGGGTCCATGCCCGCAATACGCTCTGCCGCCCGCAATACGCTCTaGCACGATGAGGGACTCGCT +
Preference number: 4 (lower is better)
Translates to: SSWSAECTTGSMPAIRSAARNTL*HDEGLA
Trigger: AGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGC...GGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGCACTCTGCGCTCCAGGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR GCA 90 bp ACGACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGCCCGCAATACGCTCTaGCACGATGAGGGACTCGCT +
Preference number: 4 (lower is better)
Translates to: TTGSMPAIRSATMRDSLWARNTL*HDEGLA
Trigger: AGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGC...CCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR GCA 90 bp GAGTGCACGACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGGCCCGCAATACGCTCTaGCACGATGAGGGACTCGCT +
Preference number: 4 (lower is better)
Translates to: ECTTGSMPAIRSATMRDSARNTL*HDEGLA
Trigger: AGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGC...CGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGCACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR GCA 90 bp GACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTGCACGACAGGGTCCATaGCCGCAATACGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: DRVHARNTLCHDEGLAVGARQGP*PQYALP
Trigger: TGGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGC...ACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR GCA 90 bp AATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCAGGGCGGGGCACGACAGGGTCCATaGCCGCAATACGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: NTLCHDEGLAVGHVVQGGARQGP*PQYALP
Trigger: TGGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGC...CCCGCCCTGAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR GCA 90 bp AATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCAGGGCGGGCTCGCAGCGCAGGGCTaGGTGGTAGTTTGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: NTLCHDEGLAVGHVVQGGLAAQG*VVVCVD
Trigger: GTCCACACAAACTACCACGCAGCCCTGCGCTGCGAG...CCCGCCCTGAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp GAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGCGTGCCCACGGTGCTaGGTCCCGTCAGACATACCT +
Preference number: 4 (lower is better)
Translates to: ERLPGQSCVSPLGHTHLCACPRC*VPSDIP
Trigger: AGGTATGTCTGACGGGACGCAGCACCGTGGGCACGC...GCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTGAGGGAGAGAACAGGTaGAGGGTGCGGGGTTACCTG +
Preference number: 4 (lower is better)
Translates to: DRVHARNTLCHDEGLAVGEGENR*RVRGYL
Trigger: CAGGTAACCCCGCACCCTGCACCTGTTCTCTCCCTC...ACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502512.1
ENST00000625442.1
CDS-3UTR CCA 90 bp CTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAACCCGCCTATGTCGATaGCGAAGCGCTTGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: LASGSHASVRLGCMCRVTTRLCR*RSAWRS
Trigger: AGAACGCCAAGCGCTTCGCCATCGACATAGGCGGGT...TGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCGTGTCCTTTCCGGAGTaGTCGAAAGACCGCACCTTG +
Preference number: 4 (lower is better)
Translates to: RLASGSHASVRLGCMCRVVSFPE*SKDRTL
Trigger: CAAGGTGCGGTCTTTCGACCACTCCGGAAAGGACAC...GACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TTCGATGAGGTCTTTGAACTTGTAGGCCCCGCCCCCGGTCGCCTGGATGACCTTCCGCCCCCGGTCGCCTaGATGACCTTGGTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: FDEVFELVGPAPGRLDDLPPPVA*MTLVSV
Trigger: CACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGG...AAGGTCATCCAGGCGACCGGGGGCGGGGCCTACAAGTTCAAAGACCTCATCGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CCA 90 bp TCTTCCTGGAGCGCAGAGTGCACGACAGGGTCCATGCCCGCAATACGCTCTGCCTGGGGGTGGTTGGTCTaGAACCGGAACTCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: SSWSAECTTGSMPAIRSAWGWLV*NRNSGS
Trigger: CGACCCTGAGTTCCGGTTCCAGACCAACCACCCCCA...GGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGCACTCTGCGCTCCAGGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp CAAGCCCCCAGAAGGTGCCGCCTCCAATGGAGCTGCCGCCGACCCACTCGAACCAAATGTGGGGGTGGTTaGTCTGGAACCGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: QAPRRCRLQWSCRRPTRTKCGGG*SGTGTQ
Trigger: CTGAGTTCCGGTTCCAGACCAACCACCCCCACATTT...GGTTCGAGTGGGTCGGCGGCAGCTCCATTGGAGGCGGCACCTTCTGGGGGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp GATGACGCTGAAGAGCCGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATAAATGTGGGGGTGGTTaGTCTGGAACCGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: DDAEEPAAQPLGQPRVLDKCGGG*SGTGTQ
Trigger: CTGAGTTCCGGTTCCAGACCAACCACCCCCACATTT...ATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCGGCTCTTCAGCGTCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATAAGGTGCCGCCTCCAATaGAGCTGCCGCCGACCCACT +
Preference number: 4 (lower is better)
Translates to: VTRICAAGVYVPRHSSTIRCRLQ*SCRRPT
Trigger: AGTGGGTCGGCGGCAGCTCCATTGGAGGCGGCACCT...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CGAGGCCAGGTGCAGGAGCTCGTCAAACTTCTTCGTTTTGGTGAGCAGAGCGCCAGGTGCCGCCTCCAATaGAGCTGCCGCCGACCCACT +
Preference number: 4 (lower is better)
Translates to: RGQVQELVKLLRFGEQSARCRLQ*SCRRPT
Trigger: AGTGGGTCGGCGGCAGCTCCATTGGAGGCGGCACCT...GGCGCTCTGCTCACCAAAACGAAGAAGTTTGACGAGCTCCTGCACCTGGCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp GAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCTCCACATTGCTGTGCTaGCCCCTCGAGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ERLPGQSCVSPLGHTHLCSTLLC*PLEARC
Trigger: GCACCTGGCCTCGAGGGGCCAGCACAGCAATGTGGA...GCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GATGAGGTCTTTGAACTTGTAGGCCCCGCCCCCGGTCGCCTGGATGACCTTGGTTCCACATTGCTGTGCTaGCCCCTCGAGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: DEVFELVGPAPGRLDDLGSTLLC*PLEARC
Trigger: GCACCTGGCCTCGAGGGGCCAGCACAGCAATGTGGA...ACCAAGGTCATCCAGGCGACCGGGGGCGGGGCCTACAAGTTCAAAGACCTCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp GAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCACTCTTGGTCGGCGGTaGCCGACTTCCCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: ERLPGQSCVSPLGHTHLCTLGRR*PTSRSC
Trigger: GCAGCTTCGGGAAGTCGGCCACCGCCGACCAAGAGT...GCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TCCCGCACCAGCATGTCCACATTGCTGTGCTGGCCCCTCGAGGCCAGGTGCAGGTCTTTGGAGAACTCTTaGTCGGCGGTGGCCGACTTC +
Preference number: 4 (lower is better)
Translates to: SRTSMSTLLCWPLEARCRSLENS*SAVADF
Trigger: GAAGTCGGCCACCGCCGACCAAGAGTTCTCCAAAGA...CCTGCACCTGGCCTCGAGGGGCCAGCACAGCAATGTGGACATGCTGGTGCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp GATGACGCTGAAGAGCCGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATTCGCCATGTCTTCTTTaGAGAACTCTTGGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: DDAEEPAAQPLGQPRVLDSPCLL*RTLGRR
Trigger: CCGCCGACCAAGAGTTCTCCAAAGAAGACATGGCGA...ATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCGGCTCTTCAGCGTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTCTGTGCAGCCGTGCGTaGAGGCAGGCCAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: MNVSQDKAASRLWVTRICLCSRA*RQASCP
Trigger: TGGGCAGCTGGCCTGCCTCCACGCACGGCTGCACAG...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp ACGACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGTCAGACAGTGCTCCCTaGTGTCCAGCAGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: TTGSMPAIRSATMRDSLWSDSAP*CPAGCA
Trigger: TGCGCAGCCTGCTGGACACCAGGGAGCACTGTCTGA...CCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CCA 90 bp TCTTCCTGGAGCGCAGAGTGCACGACAGGGTCCATGCCCGCAATACGCTCTGCCTCAGACAGTGCTCCCTaGTGTCCAGCAGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: SSWSAECTTGSMPAIRSASDSAP*CPAGCA
Trigger: TGCGCAGCCTGCTGGACACCAGGGAGCACTGTCTGA...GGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGCACTCTGCGCTCCAGGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CCA 90 bp GAGTGCACGACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGTCAGACAGTGCTCCCTaGTGTCCAGCAGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: ECTTGSMPAIRSATMRDSSDSAP*CPAGCA
Trigger: TGCGCAGCCTGCTGGACACCAGGGAGCACTGTCTGA...CGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGCACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CCA 90 bp TCTTCCTGGAGCGCAGAGTGCACGACAGGGTCCATGCCCGCAATACGCTCTGCCATGAGGGACTCGCTGTaGGTCACGTCGTTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: SSWSAECTTGSMPAIRSAMRDSL*VTSFRA
Trigger: CGCCCTGAACGACGTGACCCACAGCGAGTCCCTCAT...GGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGCACTCTGCGCTCCAGGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CCA 90 bp GAGTGCACGACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGATGAGGGACTCGCTGTaGGTCACGTCGTTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: ECTTGSMPAIRSATMRDSMRDSL*VTSFRA
Trigger: CGCCCTGAACGACGTGACCCACAGCGAGTCCCTCAT...CGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGCACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CCA 90 bp CTGTGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTAGCAGCCTCTCTTCCTaGAGCGCAGAGTGCACGACA +
Preference number: 4 (lower is better)
Translates to: LWVTSFRAGPELHARMTSSSLSS*SAECTT
Trigger: TGTCGTGCACTCTGCGCTCCAGGAAGAGAGGCTGCT...AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CCA 90 bp TGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTGTCAGCAGCCTCTCTTCCTaGAGCGCAGAGTGCACGACA +
Preference number: 4 (lower is better)
Translates to: WVTSFRAGPELHARMTSVSSLSS*SAECTT
Trigger: TGTCGTGCACTCTGCGCTCCAGGAAGAGAGGCTGCT...GACAGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CCA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTCGAGGCACGGGGAGCTaGAGCCCGTCTGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: MNVSQDKAASRLWVTRICRGTGS*SPSAPA
Trigger: TGCTGGTGCAGACGGGCTCCAGCTCCCCGTGCCTCG...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTAGCGCCTCACTCGGCTaGGACCTCGTACTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: ASRLWVTRICAAGVYVPRSASLG*DLVLED
Trigger: ATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGCGCT...ACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GCTGGCTGTTCGCGCCAGCCTTCAACCAGGCGGCGCTCTGAGGCAGAATCCTGGCTCACCTTTCCGGAGTaGTCGAAAGACCGCACCTTG +
Preference number: 4 (lower is better)
Translates to: AGCSRQPSTRRRSEAESWLTFPE*SKDRTL
Trigger: CAAGGTGCGGTCTTTCGACCACTCCGGAAAGGTGAG...CCAGGATTCTGCCTCAGAGCGCCGCCTGGTTGAAGGCTGGCGCGAACAGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
3UTR CAA 72 bp TCGCTGTGGGTCACGTCGTTCAGGGCGGGGCCTGAGTaGCACGCCAGGATGACCTCTGTCCCTCTAAGGAGT +
Preference number: 4 (lower is better)
Translates to: SLWVTSFRAGPE*HARMTSVPLRS
Trigger: ACTCCTTAGAGGGACAGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCACAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR TCA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGCCCAATGTCGTTGCTaGTCATGTGCAGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ASGSHASVRLGCMCRVTAAQCRC*SCAAGS
Trigger: AGAGCCTGCTGCACATGATCAGCAACGACATTGGGC...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CAGCATGTCCACATTGCTGTGCTGGCCCCTCGAGGCCAGGTGCAGGAGCTCGTCGCCCAATGTCGTTGCTaGTCATGTGCAGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QHVHIAVLAPRGQVQELVAQCRC*SCAAGS
Trigger: AGAGCCTGCTGCACATGATCAGCAACGACATTGGGC...GACGAGCTCCTGCACCTGGCCTCGAGGGGCCAGCACAGCAATGTGGACATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR TCA 90 bp GAGGCTCTCGCAGCGCAGGGCTGCGTGGTAGTTTGTGTGGACAGCACGGCCCATGCCCAATGTCGTTGCTaGTCATGTGCAGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: EALAAQGCVVVCVDSTAHAQCRC*SCAAGS
Trigger: AGAGCCTGCTGCACATGATCAGCAACGACATTGGGC...ATGGGCCGTGCTGTCCACACAAACTACCACGCAGCCCTGCGCTGCGAGAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGCCCAATGTCGTTGCTaGTCATGTGCAGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SQDKAASRLWVTRICAAGAQCRC*SCAAGS
Trigger: AGAGCCTGCTGCACATGATCAGCAACGACATTGGGC...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAACGGGCCGAGCTCGGGTaGTGCACTCATCAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: HASVRLGCMCRVTAVPYKRAELG*CTHQPG
Trigger: TCCGGGCTGATGAGTGCATCACCCGAGCTCGGCCCG...TTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCAGGGATCCGGGAAGTTaGACTCGTTCAGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: RLASGSHASVRLGCMCRVRDPGS*TRSDSA
Trigger: AGCACTGTCTGAACGAGTTCAACTTCCCGGATCCCT...GACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGTTCAGGGCGGGGCCTaGGTTGCACGCCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: MNVSQDKAASRLWVTRICVQGGA*VARQDD
Trigger: GTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAAC...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp GGCAGCTGCAGCGCCTCACTCGGCTGGGACCTCGTACTTGAAGATGACGCTGAATACGCTCTGCCACGATaGGGGACTCGCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: GSCSASLGWDLVLEDDAEYALPR*GTRCGS
Trigger: TGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTA...TTCAGCGTCATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGCGCTGCAGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATGGCCCATGCCCTCGATaGCCACCAGATCCGCGCCAC +
Preference number: 4 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYGPCPR*PPDPRH
Trigger: GTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCC...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCCACATTCCTGACAAGTaGCAAGCAGAAGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: RLASGSHASVRLGCMCRVHIPDK*QAEESG
Trigger: GCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTG...GACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCCCCCGCTGCTCCCGCTaGCGCTCGCTCCACACTCCG +
Preference number: 4 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTPRCSR*RSLHTP
Trigger: CGGAGTGTGGAGCGAGCGGCAGCGGGAGCAGCGGGG...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCCAGACTGTCCCCGCTaGTCCCGCTGCCGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: YLVRAHGAASRQTYLYRSPDCPR*SRCRSL
Trigger: GAGCGAGCGGCAGCGGGAGCAGCGGGGACAGTCTGG...AGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CTTGAGCACGAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCCCAGACTGTCCCCGCTaGTCCCGCTGCCGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: LEHEVAPLNQARHHVLLVPDCPR*SRCRSL
Trigger: GAGCGAGCGGCAGCGGGAGCAGCGGGGACAGTCTGG...GACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR GCA 90 bp CCGCCCCCGGTCGCCTGGATGACCTTGGTCTCTGTGTTGACGAGATGGTCTTTGTGGCGTTCTCCAGGTTaGGGAAGATCTCGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: PPPVAWMTLVSVLTRWSLWRSPG*GRSRRG
Trigger: CCCCCGACGAGATCTTCCGCAACCTGGAGAACGCCA...CAAAGACCATCTCGTCAACACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR GCA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTCGCCTCCAATGGAGCTaGCGCCGACCCACTCGAACC +
Preference number: 4 (lower is better)
Translates to: MNVSQDKAASRLWVTRICRLQWS*RRPTRT
Trigger: GGTTCGAGTGGGTCGGCGGCAGCTCCATTGGAGGCG...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GGCCAGCTGCCCAATGTCGTTGCTGATCATGTGCAGCAGGCTCTTCGCCATGTCCAAGCCCCCAGAAGGTaGCGCCTCCAATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GQLPNVVADHVQQALRHVQAPRR*RLQWSC
Trigger: GCAGCTCCATTGGAGGCGGCACCTTCTGGGGGCTTG...GACATGGCGAAGAGCCTGCTGCACATGATCAGCAACGACATTGGGCAGCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR GCA 90 bp GGCAGCTGCAGCGCCTCACTCGGCTGGGACCTCGTACTTGAAGATGACGCTGAACCCCTCGAGGCCAGGTaGAGGAGCTCGTCAAACTTC +
Preference number: 4 (lower is better)
Translates to: GSCSASLGWDLVLEDDAEPLEAR*RSSSNF
Trigger: GAAGTTTGACGAGCTCCTGCACCTGGCCTCGAGGGG...TTCAGCGTCATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGCGCTGCAGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp CGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCTCGTTGCTGATCATGTaGAGCAGGCTCTTCGCCATG +
Preference number: 4 (lower is better)
Translates to: RLASGSHASVRLGCMCRVSLLIM*SRLFAM
Trigger: CATGGCGAAGAGCCTGCTGCACATGATCAGCAACGA...GACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GAGCACGAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACACGCGGTCCAGGCTGTaGAGCCGTGCGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: EHEVAPLNQARHHVLLVDTRSRL*SRAWRQ
Trigger: CTGCCTCCACGCACGGCTGCACAGCCTGGACCGCGT...GTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR GCA 90 bp TGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTGTCCTCAGAAACAGCGCCTaGACTTCCCCCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: WVTSFRAGPELHARMTSVLRNSA*TSPLEK
Trigger: CTTCTCCAAGGGGGAAGTGCAGGCGCTGTTTCTGAG...GACAGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp CTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACACTCAGAAACAGCGCCTaGACTTCCCCCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LASGSHASVRLGCMCRVTLRNSA*TSPLEK
Trigger: CTTCTCCAAGGGGGAAGTGCAGGCGCTGTTTCTGAG...TGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTTGGCTGGCTCGCCACTaGGCGCTTCACTACCCCGTC +
Preference number: 4 (lower is better)
Translates to: MNVSQDKAASRLWVTRICWLARH*ALHYPV
Trigger: GACGGGGTAGTGAAGCGCGCAGTGGCGAGCCAGCCA...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CTGTGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTAACTCGTTCAGACAGTaGTCCCTGGTGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LWVTSFRAGPELHARMTSNSFRQ*SLVSSR
Trigger: CCTGCTGGACACCAGGGAGCACTGTCTGAACGAGTT...AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR GCA 90 bp ATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCGCACGACAGGGTCCATaGCCGCAATACGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: MPAIRSATMRDSLWVTSFARQGP*PQYALP
Trigger: TGGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGC...GAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR GCA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGAAGAGTCCGGCAGCTaGAGCGCCTCACTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: MNVSQDKAASRLWVTRICEESGS*SASLGW
Trigger: CCAGCCGAGTGAGGCGCTGCAGCTGCCGGACTCTTC...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATAGGTGCGTGCCCACGGTaGTGCGTCCCGTCAGACATA +
Preference number: 4 (lower is better)
Translates to: VTRICAAGVYVPRHSSTIGACPR*CVPSDI
Trigger: TATGTCTGACGGGACGCAGCACCGTGGGCACGCACC...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GCTGGGCTGTGCGCACCCTGCCCTAGTGGAGCTGGCTGTTCGCGCCAGCCTTCAACTAAAGTCGAGGTCTaGAGCAGCAGAGGGATGACT +
Preference number: 4 (lower is better)
Translates to: AGLCAPCPSGAGCSRQPSTKVEV*SSRGMT
Trigger: AGTCATCCCTCTGCTGCTGCAGACCTCGACTTTAGT...TGAAGGCTGGCGCGAACAGCCAGCTCCACTAGGGCAGGGTGCGCACAGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CCA 90 bp GCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCCGCCCCCGGTCGCCTaGATGACCTTGGTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: APLNQARHHVLLVDFQPQPPPVA*MTLVSV
Trigger: CACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGG...CTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CCA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGGGAAAATGTGGGGGTaGTTGGTCTGGAACCGGAAC +
Preference number: 4 (lower is better)
Translates to: ASGSHASVRLGCMCRVTAGKMWG*LVWNRN
Trigger: GTTCCGGTTCCAGACCAACCACCCCCACATTTTCCC...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GGCGCCGCCGTAGACGTCCCGCACCAGCATGTCCACATTGCTGTGCTGGCCCCTTCTCCACCTTCACGATaGAGACTCCAGAGCCGATAT +
Preference number: 4 (lower is better)
Translates to: GAAVDVPHQHVHIAVLAPSPPSR*RLQSRY
Trigger: ATATCGGCTCTGGAGTCTCCATCGTGAAGGTGGAGA...AGGGGCCAGCACAGCAATGTGGACATGCTGGTGCGGGACGTCTACGGCGGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp GTGTGGACAGCACGGCCCATGCCCTCGATGACCACCAGATCCGCGCCACGCTCCTCTCCACCTTCACGATaGAGACTCCAGAGCCGATAT +
Preference number: 4 (lower is better)
Translates to: VWTARPMPSMTTRSAPRSSPPSR*RLQSRY
Trigger: ATATCGGCTCTGGAGTCTCCATCGTGAAGGTGGAGA...GGAGCGTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCCGTGCTGTCCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp GAGGCTCTCGCAGCGCAGGGCTGCGTGGTAGTTTGTGTGGACAGCACGGCCCATTCTTTGGAGAACTCTTaGTCGGCGGTGGCCGACTTC +
Preference number: 4 (lower is better)
Translates to: EALAAQGCVVVCVDSTAHSLENS*SAVADF
Trigger: GAAGTCGGCCACCGCCGACCAAGAGTTCTCCAAAGA...ATGGGCCGTGCTGTCCACACAAACTACCACGCAGCCCTGCGCTGCGAGAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp CGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCTCGCCATGTCTTCTTTaGAGAACTCTTGGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: RLASGSHASVRLGCMCRVSPCLL*RTLGRR
Trigger: CCGCCGACCAAGAGTTCTCCAAAGAAGACATGGCGA...GACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp AGGTGCCGCCTCCAATGGAGCTGCCGCCGACCCACTCGAACCTGTCCTCCGTCTTCGCCATGTCTTCTTTaGAGAACTCTTGGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: RCRLQWSCRRPTRTCPPSSPCLL*RTLGRR
Trigger: CCGCCGACCAAGAGTTCTCCAAAGAAGACATGGCGA...AGACGGAGGACAGGTTCGAGTGGGTCGGCGGCAGCTCCATTGGAGGCGGCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp ATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCCGCATGGTCACGGGGTaGCCCCGGATAAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: MPAIRSATMRDSLWVTSFRMVTG*PRIKKP
Trigger: AGGCTTCTTTATCCGGGGCCACCCCGTGACCATGCG...GAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp CTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACACCCGCTGCTTCACTTTaGAGTAGGGATCCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LASGSHASVRLGCMCRVTPAASL*SRDPGS
Trigger: ACTTCCCGGATCCCTACTCCAAAGTGAAGCAGCGGG...TGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp ACGACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGAGCAGCCTCTCTTCCTaGAGCGCAGAGTGCACGACA +
Preference number: 4 (lower is better)
Translates to: TTGSMPAIRSATMRDSLWSSLSS*SAECTT
Trigger: TGTCGTGCACTCTGCGCTCCAGGAAGAGAGGCTGCT...CCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CCA 90 bp GACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTAGCAGCCTCTCTTCCTaGAGCGCAGAGTGCACGACA +
Preference number: 4 (lower is better)
Translates to: DRVHARNTLCHDEGLAVGSSLSS*SAECTT
Trigger: TGTCGTGCACTCTGCGCTCCAGGAAGAGAGGCTGCT...ACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CCA 90 bp GCTGGCTGTTCGCGCCAGCCTTCAACCAGGCGGCGCTCTGAGGCAGAATCCTGGATGCCCCACACTCTCTaGGTGTCCTGGAGACTAAAG +
Preference number: 4 (lower is better)
Translates to: AGCSRQPSTRRRSEAESWMPHTL*VSWRLK
Trigger: CTTTAGTCTCCAGGACACCCAGAGAGTGTGGGGCAT...CCAGGATTCTGCCTCAGAGCGCCGCCTGGTTGAAGGCTGGCGCGAACAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CCA 90 bp CTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCTTCTCGAGGCCGCATGTGTGTaGGACACCGCGCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LNQARHHVLLVDFQPQLLEAACV*DTAPGW
Trigger: CCAGCCCGGCGCGGTGTCCCACACACATGCGGCCTC...GAGAAGCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
3UTR CAA 72 bp AGCCGTGCGTGGAGGCAGGCCAGCTGCCCAATGTCGTaGCTGATCATGTGCAGCAGGCTCTTCGCCATGTCT +
Preference number: 4 (lower is better)
Translates to: SRAWRQASCPMS*LIMCSRLFAMS
Trigger: AGACATGGCGAAGAGCCTGCTGCACATGATCAGCAACGACATTGGGCAGCTGGCCTGCCTCCACGCACGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR TCA 90 bp GAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCACTTCTTCGTTTTGGTaGGCAGAGCGCCAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: ERLPGQSCVSPLGHTHLCTSSFW*AERQAP
Trigger: GGGGGCTTGGCGCTCTGCTCACCAAAACGAAGAAGT...GCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATCGAAGCTGCTGGCGATaGGGTTCCCGCTCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYRSCWR*GSRSAR
Trigger: TCGGGCTGAGCGGGAACCTCATCGCCAGCAGCTTCG...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAACGAAGCTGCTGGCGATaGGGTTCCCGCTCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: HASVRLGCMCRVTAVPYKRSCWR*GSRSAR
Trigger: TCGGGCTGAGCGGGAACCTCATCGCCAGCAGCTTCG...TTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp TCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGGCCCAATGTCGTTGCTaGTCATGTGCAGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SMPAIRSATMRDSLWVTSAQCRC*SCAAGS
Trigger: AGAGCCTGCTGCACATGATCAGCAACGACATTGGGC...CGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp CAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCCAGAGCGTCATCGGTaGGGTCCACCGTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: QYERLPGQSCVSPLGHTHPERHR*GPPCRA
Trigger: TGCCCGACACGGTGGACCTCACCGATGACGCTCTGG...ATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp AATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCAGGGCGGGCCTCCTCAAAGCAGGTaGGCCAGTATTTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: NTLCHDEGLAVGHVVQGGPPQSR*ASIFGP
Trigger: TGGCCCGAAAATACTGGCTCACCTGCTTTGAGGAGG...CCCGCCCTGAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp TGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTGTCTGCTGCCTCAGGGTCTaGAGCTTGTTCCAGTACTTC +
Preference number: 4 (lower is better)
Translates to: WVTSFRAGPELHARMTSVCCLRV*SLFQYF
Trigger: GAAGTACTGGAACAAGCTTCAGACCCTGAGGCAGCA...GACAGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR TCA 90 bp GCCTCACTCGGCTGGGACCTCGTACTTGAAGATGACGCTGAAGAGCCGGCCGCCTGCTGCCTCAGGGTCTaGAGCTTGTTCCAGTACTTC +
Preference number: 4 (lower is better)
Translates to: ASLGWDLVLEDDAEEPAACCLRV*SLFQYF
Trigger: GAAGTACTGGAACAAGCTTCAGACCCTGAGGCAGCA...GGCGGCCGGCTCTTCAGCGTCATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp GCCTCACTCGGCTGGGACCTCGTACTTGAAGATGACGCTGAAGAGCCGGCCGCCAGGGATCCGGGAAGTTaGACTCGTTCAGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: ASLGWDLVLEDDAEEPAARDPGS*TRSDSA
Trigger: AGCACTGTCTGAACGAGTTCAACTTCCCGGATCCCT...GGCGGCCGGCTCTTCAGCGTCATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp GTTTGTGTGGACAGCACGGCCCATGCCCTCGATGACCACCAGATCCGCGCCACGCACATTCCTGACAAGTaGCAAGCAGAAGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: VCVDSTAHALDDHQIRATHIPDK*QAEESG
Trigger: GCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTG...CGTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCCGTGCTGTCCACACAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp TTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCTTCTCTCCAGACTGTCCCCGCTaGTCCCGCTGCCGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: LIRHVITSSLSTFSRSFSPDCPR*SRCRSL
Trigger: GAGCGAGCGGCAGCGGGAGCAGCGGGGACAGTCTGG...AGAGAAGCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR GCA 90 bp ATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCTTCTCTTCGATGAGGTCTTTGCCAGACTGTCCCCGCTaGTCCCGCTGCCGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: ITSSLSTFSRSFSSMRSLPDCPR*SRCRSL
Trigger: GAGCGAGCGGCAGCGGGAGCAGCGGGGACAGTCTGG...CAAAGACCTCATCGAAGAGAAGCTGCGGCTGAAAGTCGACAAGGAGGACGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR GCA 90 bp CAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCGCCTCCAATGGAGCTaGCGCCGACCCACTCGAACC +
Preference number: 4 (lower is better)
Translates to: QYERLPGQSCVSPLGHTHRLQWS*RRPTRT
Trigger: GGTTCGAGTGGGTCGGCGGCAGCTCCATTGGAGGCG...ATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TCAGGGTCGGAATCCTTCTGGTACACGAAGGCCTCATGGGGGATGTTCTTGAGCCGCCTCCAATGGAGCTaGCGCCGACCCACTCGAACC +
Preference number: 4 (lower is better)
Translates to: SGSESFWYTKASWGMFLSRLQWS*RRPTRT
Trigger: GGTTCGAGTGGGTCGGCGGCAGCTCCATTGGAGGCG...GCTCAAGAACATCCCCCATGAGGCCTTCGTGTACCAGAAGGATTCCGACCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR GCA 90 bp CGGCCTCTTTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCACGCCTCCAATGGAGCTaGCGCCGACCCACTCGAACC +
Preference number: 4 (lower is better)
Translates to: RPLLKTLFGACPRCCVPSRLQWS*RRPTRT
Trigger: GGTTCGAGTGGGTCGGCGGCAGCTCCATTGGAGGCG...TGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAAAGAGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615291.3
CDS-3UTR GCA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATACCCCTCGAGGCCAGGTaGAGGAGCTCGTCAAACTTC +
Preference number: 4 (lower is better)
Translates to: VTRICAAGVYVPRHSSTIPLEAR*RSSSNF
Trigger: GAAGTTTGACGAGCTCCTGCACCTGGCCTCGAGGGG...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATAATGTCCACATTGCTGTaGTGGCCCCTCGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VTRICAAGVYVPRHSSTIMSTLL*WPLEAR
Trigger: CCTGGCCTCGAGGGGCCAGCACAGCAATGTGGACAT...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATACCAGCATGTCCACATTaGTGTGCTGGCCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: VTRICAAGVYVPRHSSTIPACPH*CAGPSR
Trigger: CCTCGAGGGGCCAGCACAGCAATGTGGACATGCTGG...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTACGCGGTCCAGGCTGTaGAGCCGTGCGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: YLVRAHGAASRQTYLYRSTRSRL*SRAWRQ
Trigger: CTGCCTCCACGCACGGCTGCACAGCCTGGACCGCGT...AGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp AATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCAGGGCGGGCTCAGAAACAGCGCCTaGACTTCCCCCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: NTLCHDEGLAVGHVVQGGLRNSA*TSPLEK
Trigger: CTTCTCCAAGGGGGAAGTGCAGGCGCTGTTTCTGAG...CCCGCCCTGAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCATTGTTCCAGTACTTCTaGCGGAACTTCTCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: ASGSHASVRLGCMCRVTALFQYF*RNFSAL
Trigger: GAGGGCGGAGAAGTTCCGGCAGAAGTACTGGAACAA...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATACGGCTGGGGTGTATGTaGCGCGTCACAGCAGTACCA +
Preference number: 4 (lower is better)
Translates to: VTRICAAGVYVPRHSSTIRLGCM*RVTAVP
Trigger: TGGTACTGCTGTGACGCGGCACATACACCCCAGCCG...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATACTCCCAGGACAAAGCTaGGTCTCGCCTCTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: VTRICAAGVYVPRHSSTILPGQS*VSPLGH
Trigger: GTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAG...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGGTGCGTGCCCACGGTaGTGCGTCCCGTCAGACATA +
Preference number: 4 (lower is better)
Translates to: MNVSQDKAASRLWVTRICGACPR*CVPSDI
Trigger: TATGTCTGACGGGACGCAGCACCGTGGGCACGCACC...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTAAAAACTCTATTTGGTaGGTGCCCACGGTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: ASRLWVTRICAAGVYVPRKNSIW*VPTVLR
Trigger: ACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTT...ACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CTGGCTGTTCGCGCCAGCCTTCAACCAGGCGGCGCTCTGAGGCAGAATCCTGGGACTAAAGTCGAGGTCTaGAGCAGCAGAGGGATGACT +
Preference number: 4 (lower is better)
Translates to: LAVRASLQPGGALRQNPGTKVEV*SSRGMT
Trigger: AGTCATCCCTCTGCTGCTGCAGACCTCGACTTTAGT...CCCAGGATTCTGCCTCAGAGCGCCGCCTGGTTGAAGGCTGGCGCGAACAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CCA 90 bp CGGCCTCTTTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCACCGCCCCCGGTCGCCTaGATGACCTTGGTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RPLLKTLFGACPRCCVPSPPPVA*MTLVSV
Trigger: CACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGG...TGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAAAGAGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000615291.3
CDS-3UTR CCA 90 bp GGCCAGCTGCCCAATGTCGTTGCTGATCATGTGCAGCAGGCTCTTCGCCATGTCTGGGGGTGGTTGGTCTaGAACCGGAACTCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: GQLPNVVADHVQQALRHVWGWLV*NRNSGS
Trigger: CGACCCTGAGTTCCGGTTCCAGACCAACCACCCCCA...GACATGGCGAAGAGCCTGCTGCACATGATCAGCAACGACATTGGGCAGCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp GAGTGCACGACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGGGGAAAATGTGGGGGTaGTTGGTCTGGAACCGGAAC +
Preference number: 4 (lower is better)
Translates to: ECTTGSMPAIRSATMRDSGKMWG*LVWNRN
Trigger: GTTCCGGTTCCAGACCAACCACCCCCACATTTTCCC...CGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp GCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTTCTCCACCTTCACGATaGAGACTCCAGAGCCGATAT +
Preference number: 4 (lower is better)
Translates to: ASRLWVTRICAAGVYVPRSPPSR*RLQSRY
Trigger: ATATCGGCTCTGGAGTCTCCATCGTGAAGGTGGAGA...ACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCTTAGGTGCCGCCTCCAATaGAGCTGCCGCCGACCCACT +
Preference number: 4 (lower is better)
Translates to: PLNQARHHVLLVDFQPQLRCRLQ*SCRRPT
Trigger: AGTGGGTCGGCGGCAGCTCCATTGGAGGCGGCACCT...AAGCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp CACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAAAGGTGCCGCCTCCAATaGAGCTGCCGCCGACCCACT +
Preference number: 4 (lower is better)
Translates to: HASVRLGCMCRVTAVPYKRCRLQ*SCRRPT
Trigger: AGTGGGTCGGCGGCAGCTCCATTGGAGGCGGCACCT...TTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp ATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCTCAGGAACGCTCCGATaGCTCCCAGGTAGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: MPAIRSATMRDSLWVTSFSGTLR*LPGSLR
Trigger: ACGAAGGCTACCTGGGAGCCATCGGAGCGTTCCTGA...GAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp CGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCTCTCCCCAGCTGTACTaGTTAGGATTGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RLASGSHASVRLGCMCRVSPQLY*LGLSCS
Trigger: TGAGCAGGACAATCCTAACCAGTACAGCTGGGGAGA...GACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATCAGACAGTGCTCCCTaGTGTCCAGCAGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: VTRICAAGVYVPRHSSTISDSAP*CPAGCA
Trigger: TGCGCAGCCTGCTGGACACCAGGGAGCACTGTCTGA...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TCTTCCTGGAGCGCAGAGTGCACGACAGGGTCCATGCCCGCAATACGCTCTGCCCCCGCTGCTTCACTTTaGAGTAGGGATCCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SSWSAECTTGSMPAIRSAPAASL*SRDPGS
Trigger: ACTTCCCGGATCCCTACTCCAAAGTGAAGCAGCGGG...GGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGCACTCTGCGCTCCAGGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CCA 90 bp GACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCCCGCTGCTTCACTTTaGAGTAGGGATCCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: DRVHARNTLCHDEGLAVGPAASL*SRDPGS
Trigger: ACTTCCCGGATCCCTACTCCAAAGTGAAGCAGCGGG...ACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CCA 90 bp TCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGAGCGCCTCACTCGGCTaGGACCTCGTACTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: SMPAIRSATMRDSLWVTSSASLG*DLVLED
Trigger: ATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGCGCT...CGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp CTGGCTGTTCGCGCCAGCCTTCAACCAGGCGGCGCTCTGAGGCAGAATCCTGGGAAAACCCTATGTCGATaGCGAAGCGCTTGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: LAVRASLQPGGALRQNPGKTLCR*RSAWRS
Trigger: AGAACGCCAAGCGCTTCGCCATCGACATAGGGTTTT...CCCAGGATTCTGCCTCAGAGCGCCGCCTGGTTGAAGGCTGGCGCGAACAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR TCA 90 bp AGGCGGCGCTCTGAGGCAGAATCCTGGGCAAGAGGGAGGAGCCTAGGACCGTGGGATCTCTTCTTGAACTaGAATCTCATAGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: RRRSEAESWARGRSLGPWDLFLN*NLIGRL
Trigger: GAGCCGCCCTATGAGATTTCAGTTCAAGAAGAGATC...CCACGGTCCTAGGCTCCTCCCTCTTGCCCAGGATTCTGCCTCAGAGCGCCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR TCA 90 bp GAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCCATGGGGGATGTTCTTaGGCACGAAGTTGCACCCCT +
Preference number: 4 (lower is better)
Translates to: ERLPGQSCVSPLGHTHLCHGGCS*ARSCTP
Trigger: AGGGGTGCAACTTCGTGCTCAAGAACATCCCCCATG...GCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378466.9
ENST00000615291.3
CDS-3UTR TCA 90 bp CAAGCCCCCAGAAGGTGCCGCCTCCAATGGAGCTGCCGCCGACCCACTCGAACCCTCCAGAGCCGATATTaGCAAGAAGATAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: QAPRRCRLQWSCRRPTRTLQSRY*QEDRGK
Trigger: TTTTCCCCTATCTTCTTGTCAATATCGGCTCTGGAG...GGTTCGAGTGGGTCGGCGGCAGCTCCATTGGAGGCGGCACCTTCTGGGGGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR TCA 90 bp AATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCAGGGCGGGTGCTGCCTCAGGGTCTaGAGCTTGTTCCAGTACTTC +
Preference number: 4 (lower is better)
Translates to: NTLCHDEGLAVGHVVQGGCCLRV*SLFQYF
Trigger: GAAGTACTGGAACAAGCTTCAGACCCTGAGGCAGCA...CCCGCCCTGAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR TCA 90 bp GAGTGCACGACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGTGCTGCCTCAGGGTCTaGAGCTTGTTCCAGTACTTC +
Preference number: 4 (lower is better)
Translates to: ECTTGSMPAIRSATMRDSCCLRV*SLFQYF
Trigger: GAAGTACTGGAACAAGCTTCAGACCCTGAGGCAGCA...CGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR TCA 90 bp AATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCAGGGCGGGAGGGATCCGGGAAGTTaGACTCGTTCAGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: NTLCHDEGLAVGHVVQGGRDPGS*TRSDSA
Trigger: AGCACTGTCTGAACGAGTTCAACTTCCCGGATCCCT...CCCGCCCTGAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR TCA 90 bp TCTTCCTGGAGCGCAGAGTGCACGACAGGGTCCATGCCCGCAATACGCTCTGCCAGGGATCCGGGAAGTTaGACTCGTTCAGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: SSWSAECTTGSMPAIRSARDPGS*TRSDSA
Trigger: AGCACTGTCTGAACGAGTTCAACTTCCCGGATCCCT...GGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGCACTCTGCGCTCCAGGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR TCA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGGTTCAGGGCGGGGCCTaGGTTGCACGCCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: LCGWGVCAASQQYHINTLVQGGA*VARQDD
Trigger: GTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAAC...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCCGCAGATGTCCACATTGCTGTaGTGGCCCCTCGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: APLNQARHHVLLVDFQPQMSTLL*WPLEAR
Trigger: CCTGGCCTCGAGGGGCCAGCACAGCAATGTGGACAT...CTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR GCA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTCCAGCATGTCCACATTaGTGTGCTGGCCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: MNVSQDKAASRLWVTRICPACPH*CAGPSR
Trigger: CCTCGAGGGGCCAGCACAGCAATGTGGACATGCTGG...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTCGTTGCTGATCATGTaGAGCAGGCTCTTCGCCATG +
Preference number: 4 (lower is better)
Translates to: SMPAIRSATMRDSLWVTSSLLIM*SRLFAM
Trigger: CATGGCGAAGAGCCTGCTGCACATGATCAGCAACGA...CGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATGGAGGCAGGCCAGCTaGCCAATGTCGTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: VTRICAAGVYVPRHSSTIWRQAS*PMSLLI
Trigger: GATCAGCAACGACATTGGGCAGCTGGCCTGCCTCCA...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATCATCAGCCCGGAGCTaGCTGCATAGTTCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: VTRICAAGVYVPRHSSTISSARS*LHSSLP
Trigger: GGGGAGAGAACTATGCAGGCAGCTCCGGGCTGATGA...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAACTCCGCCCTCTCGGCTaGATCCACAGAGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HASVRLGCMCRVTAVPYKLRPLG*IHRVWL
Trigger: CAGCCAGACTCTGTGGATGCAGCCGAGAGGGCGGAG...TTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CGGCCTCTTTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCATGGTGTCCAGCAGGCTaGGCACGGTCAGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: RPLLKTLFGACPRCCVPSWCPAG*ARSGSH
Trigger: ATGGGACCCTGACCGTGCGCAGCCTGCTGGACACCA...TGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAAAGAGGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615291.3
CDS-3UTR GCA 90 bp ATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCAACTCGTTCAGACAGTaGTCCCTGGTGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: MPAIRSATMRDSLWVTSFNSFRQ*SLVSSR
Trigger: CCTGCTGGACACCAGGGAGCACTGTCTGAACGAGTT...GAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR GCA 90 bp CCTCTTTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACTTCACCAGCGCCAGCTaGCGTTCCTCCCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PLLKTLFGACPRCCVPSDFTSAS*RSSQPS
Trigger: GCTGGGCTGGGAGGAACGGCAGCTGGCGCTGGTGAA...GTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAAAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615291.3
CDS-3UTR GCA 90 bp TATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTACGCTCCCGCACCAGTaGGGCCAGCCCCTTATCCAG +
Preference number: 4 (lower is better)
Translates to: YLVRAHGAASRQTYLYRSTLPHQ*GQPLIQ
Trigger: CTGGATAAGGGGCTGGCCGCACTGGTGCGGGAGCGT...AGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGGAAGAGTCCGGCAGCTaGAGCGCCTCACTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LCGWGVCAASQQYHINTLEESGS*SASLGW
Trigger: CCAGCCGAGTGAGGCGCTGCAGCTGCCGGACTCTTC...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CGGCCTCTTTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGCGTGCCCACGGTGCTaGGTCCCGTCAGACATACCT +
Preference number: 4 (lower is better)
Translates to: RPLLKTLFGACPRCCVPSACPRC*VPSDIP
Trigger: AGGTATGTCTGACGGGACGCAGCACCGTGGGCACGC...TGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAAAGAGGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615291.3
CDS-3UTR GCA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAAAAAACTCTATTTGGTaGGTGCCCACGGTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: ASGSHASVRLGCMCRVTAKNSIW*VPTVLR
Trigger: ACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTT...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp AGCACGAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTGGGCCTGGGGGTCCATaGCCCACACTCTCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: STKLHPLIRHVITSSLSTGPGGP*PTLSGC
Trigger: ACACCCAGAGAGTGTGGGGCATGGACCCCCAGGCCC...AGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CCA 90 bp CTTGAGCACGAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCCCGCCCCCGGTCGCCTaGATGACCTTGGTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LEHEVAPLNQARHHVLLVPPPVA*MTLVSV
Trigger: CACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGG...GACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCCGCCCCCGGTCGCCTaGATGACCTTGGTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDPPPVA*MTLVSV
Trigger: CACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGG...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp AATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCAGGGCGGGAAATGTGGGGGTGGTTaGTCTGGAACCGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: NTLCHDEGLAVGHVVQGGKCGGG*SGTGTQ
Trigger: CTGAGTTCCGGTTCCAGACCAACCACCCCCACATTT...CCCGCCCTGAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATAGGTGCCGCCTCCAATaGAGCTGCCGCCGACCCACT +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDRCRLQ*SCRRPT
Trigger: AGTGGGTCGGCGGCAGCTCCATTGGAGGCGGCACCT...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAAACTCTTGGTCGGCGGTaGCCGACTTCCCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: HASVRLGCMCRVTAVPYKTLGRR*PTSRSC
Trigger: GCAGCTTCGGGAAGTCGGCCACCGCCGACCAAGAGT...TTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GAGTGCACGACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGTCGCCATGTCTTCTTTaGAGAACTCTTGGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: ECTTGSMPAIRSATMRDSSPCLL*RTLGRR
Trigger: CCGCCGACCAAGAGTTCTCCAAAGAAGACATGGCGA...CGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTCGCATGGTCACGGGGTaGCCCCGGATAAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: MNVSQDKAASRLWVTRICRMVTG*PRIKKP
Trigger: AGGCTTCTTTATCCGGGGCCACCCCGTGACCATGCG...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACATCTCCCCAGCTGTACTaGTTAGGATTGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LASGSHASVRLGCMCRVTSPQLY*LGLSCS
Trigger: TGAGCAGGACAATCCTAACCAGTACAGCTGGGGAGA...TGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGTCTCCCCAGCTGTACTaGTTAGGATTGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SQDKAASRLWVTRICAAGSPQLY*LGLSCS
Trigger: TGAGCAGGACAATCCTAACCAGTACAGCTGGGGAGA...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTCGAGGCACGGGGAGCTaGAGCCCGTCTGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LKTLFGACPRCCVPSDIPRGTGS*SPSAPA
Trigger: TGCTGGTGCAGACGGGCTCCAGCTCCCCGTGCCTCG...AGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAAGCTGCGTCTCGCCTCTaGGTCACACGCATCTGTGCG +
Preference number: 4 (lower is better)
Translates to: HASVRLGCMCRVTAVPYKAASRL*VTRICA
Trigger: CGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGC...TTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCTTCTCAGGAGCCTAGGACCGTaGCGACCTCAGGGCCACCCA +
Preference number: 4 (lower is better)
Translates to: LNQARHHVLLVDFQPQLLRSLGP*RPQGHP
Trigger: TGGGTGGCCCTGAGGTCGCCACGGTCCTAGGCTCCT...GAGAAGCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR TCA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGTTTGTGCTGTACCGTTaGATAGTAGGCCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: SQDKAASRLWVTRICAAGFVLYR*IVGQLG
Trigger: ACCAAGCTGGCCTACTATTCAACGGTACAGCACAAA...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCAGTGCAGTCGAGCAGTaGTCTCTTCTTGAACTGAAA +
Preference number: 4 (lower is better)
Translates to: RLASGSHASVRLGCMCRVSAVEQ*SLLELK
Trigger: TTTCAGTTCAAGAAGAGATCACTGCTCGACTGCACT...GACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CACATTGCTGTGCTGGCCCCTCGAGGCCAGGTGCAGGAGCTCGTCAAACTTCTTCATGGGGGATGTTCTTaGGCACGAAGTTGCACCCCT +
Preference number: 4 (lower is better)
Translates to: HIAVLAPRGQVQELVKLLHGGCS*ARSCTP
Trigger: AGGGGTGCAACTTCGTGCTCAAGAACATCCCCCATG...AAGAAGTTTGACGAGCTCCTGCACCTGGCCTCGAGGGGCCAGCACAGCAATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR TCA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTACTTCTTCGTTTTGGTaGGCAGAGCGCCAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: MNVSQDKAASRLWVTRICTSSFW*AERQAP
Trigger: GGGGGCTTGGCGCTCTGCTCACCAAAACGAAGAAGT...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp TTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCTTCTCTCGAAGCTGCTGGCGATaGGGTTCCCGCTCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: LIRHVITSSLSTFSRSFSRSCWR*GSRSAR
Trigger: TCGGGCTGAGCGGGAACCTCATCGCCAGCAGCTTCG...AGAGAAGCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR TCA 90 bp CGCCACTGCGCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTACGCCACGTCCTCACTaGCCCACCAGGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RHCALHYLKRAETSPKLLTPRPH*PTRWPG
Trigger: TCCTGGCCACCTGGTGGGTCAGTGAGGACGTGGCGT...AAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGCGCAGTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR GCA 90 bp CACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATGGCGTTCTCCAGGTTaGGGAAGATCTCGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: HASVRLGCMCRVTAVPYKWRSPG*GRSRRG
Trigger: CCCCCGACGAGATCTTCCGCAACCTGGAGAACGCCA...TTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCCGCCTCCAATGGAGCTaGCGCCGACCCACTCGAACC +
Preference number: 4 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTRLQWS*RRPTRT
Trigger: GGTTCGAGTGGGTCGGCGGCAGCTCCATTGGAGGCG...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCAAGCCCCCAGAAGGTaGCGCCTCCAATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDQAPRR*RLQWSC
Trigger: GCAGCTCCATTGGAGGCGGCACCTTCTGGGGGCTTG...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATATGTCCACATTGCTGTaGTGGCCCCTCGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYMSTLL*WPLEAR
Trigger: CCTGGCCTCGAGGGGCCAGCACAGCAATGTGGACAT...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCTGGAGGCAGGCCAGCTaGCCAATGTCGTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: HPLIRHVITSSLSTFSRSWRQAS*PMSLLI
Trigger: GATCAGCAACGACATTGGGCAGCTGGCCTGCCTCCA...GCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR GCA 90 bp GAGGCTCTCGCAGCGCAGGGCTGCGTGGTAGTTTGTGTGGACAGCACGGCCCATTGGTTAGGATTGTCCTaGTCAGCTCCTTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: EALAAQGCVVVCVDSTAHWLGLS*SAPFRN
Trigger: GTTCCTGAAAGGAGCTGAGCAGGACAATCCTAACCA...ATGGGCCGTGCTGTCCACACAAACTACCACGCAGCCCTGCGCTGCGAGAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp TGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTGTCTGGTTAGGATTGTCCTaGTCAGCTCCTTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: WVTSFRAGPELHARMTSVWLGLS*SAPFRN
Trigger: GTTCCTGAAAGGAGCTGAGCAGGACAATCCTAACCA...GACAGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGGCTGGCTCGCCACTaGGCGCTTCACTACCCCGTC +
Preference number: 4 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTWLARH*ALHYPV
Trigger: GACGGGGTAGTGAAGCGCGCAGTGGCGAGCCAGCCA...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCCGCCCTCTCGGCTaGATCCACAGAGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: YLVRAHGAASRQTYLYRSLRPLG*IHRVWL
Trigger: CAGCCAGACTCTGTGGATGCAGCCGAGAGGGCGGAG...AGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp ATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCTTGTTCCAGTACTTCTaGCGGAACTTCTCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: MPAIRSATMRDSLWVTSFLFQYF*RNFSAL
Trigger: GAGGGCGGAGAAGTTCCGGCAGAAGTACTGGAACAA...GAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp TATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTTGGTGTCCAGCAGGCTaGGCACGGTCAGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: YLVRAHGAASRQTYLYRSWCPAG*ARSGSH
Trigger: ATGGGACCCTGACCGTGCGCAGCCTGCTGGACACCA...AGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATTGGTGTCCAGCAGGCTaGGCACGGTCAGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDWCPAG*ARSGSH
Trigger: ATGGGACCCTGACCGTGCGCAGCCTGCTGGACACCA...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGTGGTGTCCAGCAGGCTaGGCACGGTCAGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: LCGWGVCAASQQYHINTLWCPAG*ARSGSH
Trigger: ATGGGACCCTGACCGTGCGCAGCCTGCTGGACACCA...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAAGCACGACAGGGTCCATaGCCGCAATACGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: HASVRLGCMCRVTAVPYKARQGP*PQYALP
Trigger: TGGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGC...TTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CGGCCTCTTTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCACTCGCAGCGCAGGGCTaGGTGGTAGTTTGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: RPLLKTLFGACPRCCVPSLAAQG*VVVCVD
Trigger: GTCCACACAAACTACCACGCAGCCCTGCGCTGCGAG...TGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAAAGAGGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615291.3
CDS-3UTR GCA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCGAAGAGTCCGGCAGCTaGAGCGCCTCACTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTEESGS*SASLGW
Trigger: CCAGCCGAGTGAGGCGCTGCAGCTGCCGGACTCTTC...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATGCGTGCCCACGGTGCTaGGTCCCGTCAGACATACCT +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDACPRC*VPSDIP
Trigger: AGGTATGTCTGACGGGACGCAGCACCGTGGGCACGC...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGGCGTGCCCACGGTGCTaGGTCCCGTCAGACATACCT +
Preference number: 4 (lower is better)
Translates to: LCGWGVCAASQQYHINTLACPRC*VPSDIP
Trigger: AGGTATGTCTGACGGGACGCAGCACCGTGGGCACGC...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTGGTGCGTGCCCACGGTaGTGCGTCCCGTCAGACATA +
Preference number: 4 (lower is better)
Translates to: YLVRAHGAASRQTYLYRSGACPR*CVPSDI
Trigger: TATGTCTGACGGGACGCAGCACCGTGGGCACGCACC...AGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAAACTCTATTTGGTGCGTaGCCACGGTGCTGCGTCCCG +
Preference number: 4 (lower is better)
Translates to: HASVRLGCMCRVTAVPYKTLFGA*PRCCVP
Trigger: CGGGACGCAGCACCGTGGGCACGCACCAAATAGAGT...TTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CCCCCGGTCGCCTGGATGACCTTGGTCTCTGTGTTGACGAGATGGTCTTTGATGCAGCAGAGGGATGACTaGGAGACAAGTGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PPVAWMTLVSVLTRWSLMQQRDD*ETSARS
Trigger: GGACCTGGCACTTGTCTCGCAGTCATCCCTCTGCTG...CATCAAAGACCATCTCGTCAACACAGAGACCAAGGTCATCCAGGCGACCGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CCA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATCGATGGCGAAGCGCTTaGCGTTCTCCAGGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYRWRSA*RSPGCG
Trigger: TCCGCAACCTGGAGAACGCCAAGCGCTTCGCCATCG...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GGCCCCGCCCCCGGTCGCCTGGATGACCTTGGTCTCTGTGTTGACGAGATGGTCTCTGTGTTGACGAGATaGTCTTTGATGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPAPGRLDDLGLCVDEMVSVLTR*SLMKSR
Trigger: CCTGGACTTCATCAAAGACCATCTCGTCAACACAGA...GACCATCTCGTCAACACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CCA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCCCGCCCCCGGTCGCCTaGATGACCTTGGTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTPPPVA*MTLVSV
Trigger: CACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGG...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATGGGGGTGGTTGGTCTaGAACCGGAACTCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: HASVRLGCMCRVTAVPYKWGWLV*NRNSGS
Trigger: CGACCCTGAGTTCCGGTTCCAGACCAACCACCCCCA...TTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GAGCACGAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTGGGGGTGGTTGGTCTaGAACCGGAACTCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: EHEVAPLNQARHHVLLVDWGWLV*NRNSGS
Trigger: CGACCCTGAGTTCCGGTTCCAGACCAACCACCCCCA...GTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATAGGGAAAATGTGGGGGTaGTTGGTCTGGAACCGGAAC +
Preference number: 4 (lower is better)
Translates to: VTRICAAGVYVPRHSSTIGKMWG*LVWNRN
Trigger: GTTCCGGTTCCAGACCAACCACCCCCACATTTTCCC...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GCCACTGCGCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTCTGTGCAGCCGTGCGTaGAGGCAGGCCAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ATARFTTSKEQRRLLNCFLCSRA*RQASCP
Trigger: TGGGCAGCTGGCCTGCCTCCACGCACGGCTGCACAG...AAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGCGCAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR CCA 90 bp TCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTCTCCCCAGCTGTACTaGTTAGGATTGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SMPAIRSATMRDSLWVTSSPQLY*LGLSCS
Trigger: TGAGCAGGACAATCCTAACCAGTACAGCTGGGGAGA...CGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGCGGCAGGTCAACCAGTaGCCTCTCCAGCCGGTCCAT +
Preference number: 4 (lower is better)
Translates to: LCGWGVCAASQQYHINTLRQVNQ*PLQPVH
Trigger: ATGGACCGGCTGGAGAGGCCACTGGTTGACCTGCCG...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATTCAGACAGTGCTCCCTaGTGTCCAGCAGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYSDSAP*CPAGCA
Trigger: TGCGCAGCCTGCTGGACACCAGGGAGCACTGTCTGA...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TCTGTCCCTCTAAGGAGTAGCTCCCTGACAAAGGGGAAGACTCCCAAAATGATGCGAGGCACGGGGAGCTaGAGCCCGTCTGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: SVPLRSSSLTKGKTPKMMRGTGS*SPSAPA
Trigger: TGCTGGTGCAGACGGGCTCCAGCTCCCCGTGCCTCG...CATCATTTTGGGAGTCTTCCCCTTTGTCAGGGAGCTACTCCTTAGAGGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CCA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATAAGCGCCTCACTCGGCTaGGACCTCGTACTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: VTRICAAGVYVPRHSSTISASLG*DLVLED
Trigger: ATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGCGCT...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTGCTGCGTCTCGCCTCTaGGTCACACGCATCTGTGCG +
Preference number: 4 (lower is better)
Translates to: YLVRAHGAASRQTYLYRSAASRL*VTRICA
Trigger: CGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGC...AGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GTCTTTGAACTTGTAGGCCCCGCCCCCGGTCGCCTGGATGACCTTGGTCTCTGTAATAGTAGGCCAGCTTaGTTAACGACCCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VFELVGPAPGRLDDLGLCNSRPA*LTTRLQ
Trigger: CTGCAGGCGGGTCGTTAACCAAGCTGGCCTACTATT...ACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGGGGCCTACAAGTTCAAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CCA 90 bp AGGTTCCTACAAAGGGTCTTGAAGGGACACGGCGGAAGGCAGGGGAGGCTGTCCAATAGTAGGCCAGCTTaGTTAACGACCCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RFLQRVLKGHGGRQGRLSNSRPA*LTTRLQ
Trigger: CTGCAGGCGGGTCGTTAACCAAGCTGGCCTACTATT...GGACAGCCTCCCCTGCCTTCCGCCGTGTCCCTTCAAGACCCTTTGTAGGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CCA 90 bp TTCGATGAGGTCTTTGAACTTGTAGGCCCCGCCCCCGGTCGCCTGGATGACCTTTCTGAGGCAGAATCCTaGGCAAGAGGGAGGAGCCTA +
Preference number: 4 (lower is better)
Translates to: FDEVFELVGPAPGRLDDLSEAES*ARGRSL
Trigger: TAGGCTCCTCCCTCTTGCCCAGGATTCTGCCTCAGA...AAGGTCATCCAGGCGACCGGGGGCGGGGCCTACAAGTTCAAAGACCTCATCGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR TCA 90 bp GAGCTGCCGCCGACCCACTCGAACCTGTCCTCCGTCTCCACCTTCACGATGGAGAGTGCAGTCGAGCAGTaGTCTCTTCTTGAACTGAAA +
Preference number: 4 (lower is better)
Translates to: ELPPTHSNLSSVSTFTMESAVEQ*SLLELK
Trigger: TTTCAGTTCAAGAAGAGATCACTGCTCGACTGCACT...CTCCATCGTGAAGGTGGAGACGGAGGACAGGTTCGAGTGGGTCGGCGGCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR TCA 90 bp CGCTCTGAGGCAGAATCCTGGGCAAGAGGGAGGAGCCTAGGACCGTGGCGACCTAGTGCAGTCGAGCAGTaGTCTCTTCTTGAACTGAAA +
Preference number: 4 (lower is better)
Translates to: RSEAESWARGRSLGPWRPSAVEQ*SLLELK
Trigger: TTTCAGTTCAAGAAGAGATCACTGCTCGACTGCACT...AGGTCGCCACGGTCCTAGGCTCCTCCCTCTTGCCCAGGATTCTGCCTCAGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR TCA 90 bp GTGGAGCTGGCTGTTCGCGCCAGCCTTCAACCAGGCGGCGCTCTGAGGCAGAATAGTGCAGTCGAGCAGTaGTCTCTTCTTGAACTGAAA +
Preference number: 4 (lower is better)
Translates to: VELAVRASLQPGGALRQNSAVEQ*SLLELK
Trigger: TTTCAGTTCAAGAAGAGATCACTGCTCGACTGCACT...ATTCTGCCTCAGAGCGCCGCCTGGTTGAAGGCTGGCGCGAACAGCCAGCTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR TCA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTCATGGGGGATGTTCTTaGGCACGAAGTTGCACCCCT +
Preference number: 4 (lower is better)
Translates to: MNVSQDKAASRLWVTRICHGGCS*ARSCTP
Trigger: AGGGGTGCAACTTCGTGCTCAAGAACATCCCCCATG...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378466.9
ENST00000615291.3
CDS-3UTR TCA 90 bp TCGTCAAACTTCTTCGTTTTGGTGAGCAGAGCGCCAAGCCCCCAGAAGGTGCCGCATGGGGGATGTTCTTaGGCACGAAGTTGCACCCCT +
Preference number: 4 (lower is better)
Translates to: SSNFFVLVSRAPSPQKVPHGGCS*ARSCTP
Trigger: AGGGGTGCAACTTCGTGCTCAAGAACATCCCCCATG...CGGCACCTTCTGGGGGCTTGGCGCTCTGCTCACCAAAACGAAGAAGTTTGACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR TCA 90 bp GTTTGTGTGGACAGCACGGCCCATGCCCTCGATGACCACCAGATCCGCGCCACGCTCCAGAGCCGATATTaGCAAGAAGATAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: VCVDSTAHALDDHQIRATLQSRY*QEDRGK
Trigger: TTTTCCCCTATCTTCTTGTCAATATCGGCTCTGGAG...CGTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCCGTGCTGTCCACACAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp CTGTGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTCTCCAGAGCCGATATTaGCAAGAAGATAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: LWVTSFRAGPELHARMTSLQSRY*QEDRGK
Trigger: TTTTCCCCTATCTTCTTGTCAATATCGGCTCTGGAG...AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCACTCCAGAGCCGATATTaGCAAGAAGATAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: ASGSHASVRLGCMCRVTALQSRY*QEDRGK
Trigger: TTTTCCCCTATCTTCTTGTCAATATCGGCTCTGGAG...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTCGGGCCGAGCTCGGGTaGTGCACTCATCAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAARAELG*CTHQPG
Trigger: TCCGGGCTGATGAGTGCATCACCCGAGCTCGGCCCG...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp TCTGTCCCTCTAAGGAGTAGCTCCCTGACAAAGGGGAAGACTCCCAAAATGATGCCAGAGCGTCATCGGTaGGGTCCACCGTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: SVPLRSSSLTKGKTPKMMPERHR*GPPCRA
Trigger: TGCCCGACACGGTGGACCTCACCGATGACGCTCTGG...CATCATTTTGGGAGTCTTCCCCTTTGTCAGGGAGCTACTCCTTAGAGGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTCCTCCTCAAAGCAGGTaGGCCAGTATTTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: MNVSQDKAASRLWVTRICPPQSR*ASIFGP
Trigger: TGGCCCGAAAATACTGGCTCACCTGCTTTGAGGAGG...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATGCTGCCTCAGGGTCTaGAGCTTGTTCCAGTACTTC +
Preference number: 4 (lower is better)
Translates to: VTRICAAGVYVPRHSSTICCLRV*SLFQYF
Trigger: GAAGTACTGGAACAAGCTTCAGACCCTGAGGCAGCA...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp TCGATGACCACCAGATCCGCGCCACGCTCCCGCACCAGTGCGGCCAGCCCCTTAGGAAGACTCCCAAAATaGTGTCTATTCCACTGTTAT +
Preference number: 4 (lower is better)
Translates to: SMTTRSAPRSRTSAASPLGRLPK*CLFHCY
Trigger: ATAACAGTGGAATAGACATCATTTTGGGAGTCTTCC...TAAGGGGCTGGCCGCACTGGTGCGGGAGCGTGGCGCGGATCTGGTGGTCATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp TCTGTCCCTCTAAGGAGTAGCTCCCTGACAAAGGGGAAGACTCCCAAAATGATGGTTCAGGGCGGGGCCTaGGTTGCACGCCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: SVPLRSSSLTKGKTPKMMVQGGA*VARQDD
Trigger: GTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAAC...CATCATTTTGGGAGTCTTCCCCTTTGTCAGGGAGCTACTCCTTAGAGGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR TCA 90 bp TATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTTACGCTCTGCCACGATaGGGGACTCGCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: YLVRAHGAASRQTYLYRSYALPR*GTRCGS
Trigger: TGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTA...AGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCTTTCCTACAAAGGGTCTTaGAGGGACACGGCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PLNQARHHVLLVDFQPQLSYKGS*RDTAEG
Trigger: GCCTTCCGCCGTGTCCCTTCAAGACCCTTTGTAGGA...AAGCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR GCA 90 bp GCAGGCTTCGATGTAGGTATTCTCAAACTTAATGAAGTGCAGTCGAGCAGTGATCCCCGCTGCTCCCGCTaGCGCTCGCTCCACACTCCG +
Preference number: 4 (lower is better)
Translates to: AGFDVGILKLNEVQSSSDPRCSR*RSLHTP
Trigger: CGGAGTGTGGAGCGAGCGGCAGCGGGAGCAGCGGGG...ATCACTGCTCGACTGCACTTCATTAAGTTTGAGAATACCTACATCGAAGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR GCA 90 bp CTCATAGGGCGGCTCATGTTCACGTTCTGTGTCCTGGAAAACAGAGTAGGGGAGTGGCGTTCTCCAGGTTaGGGAAGATCTCGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: LIGRLMFTFCVLENRVGEWRSPG*GRSRRG
Trigger: CCCCCGACGAGATCTTCCGCAACCTGGAGAACGCCA...CTCCCCTACTCTGTTTTCCAGGACACAGAACGTGAACATGAGCCGCCCTATGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR GCA 90 bp TTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTCAAGCCCCCAGAAGGTaGCGCCTCCAATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LKTLFGACPRCCVPSDIPQAPRR*RLQWSC
Trigger: GCAGCTCCATTGGAGGCGGCACCTTCTGGGGGCTTG...AGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GGGGATGTTCTTGAGCACGAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCCCCCTCGAGGCCAGGTaGAGGAGCTCGTCAAACTTC +
Preference number: 4 (lower is better)
Translates to: GDVLEHEVAPLNQARHHVPLEAR*RSSSNF
Trigger: GAAGTTTGACGAGCTCCTGCACCTGGCCTCGAGGGG...GACGTGATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAGAACATCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR GCA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGCCCCTCGAGGCCAGGTaGAGGAGCTCGTCAAACTTC +
Preference number: 4 (lower is better)
Translates to: LCGWGVCAASQQYHINTLPLEAR*RSSSNF
Trigger: GAAGTTTGACGAGCTCCTGCACCTGGCCTCGAGGGG...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATATGTCCACATTGCTGTaGTGGCCCCTCGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDMSTLL*WPLEAR
Trigger: CCTGGCCTCGAGGGGCCAGCACAGCAATGTGGACAT...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TGGGGGATGTTCTTGAGCACGAAGTTGCACCCCTTAATCAGGCACGTCATCACGATGTCCACATTGCTGTaGTGGCCCCTCGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: WGMFLSTKLHPLIRHVITMSTLL*WPLEAR
Trigger: CCTGGCCTCGAGGGGCCAGCACAGCAATGTGGACAT...CGTGATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAGAACATCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR GCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCCAGCATGTCCACATTaGTGTGCTGGCCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDPACPH*CAGPSR
Trigger: CCTCGAGGGGCCAGCACAGCAATGTGGACATGCTGG...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTACGCGGTCCAGGCTGTaGAGCCGTGCGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAATRSRL*SRAWRQ
Trigger: CTGCCTCCACGCACGGCTGCACAGCCTGGACCGCGT...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATTCATCAGCCCGGAGCTaGCTGCATAGTTCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYSSARS*LHSSLP
Trigger: GGGGAGAGAACTATGCAGGCAGCTCCGGGCTGATGA...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATTGTTCCAGTACTTCTaGCGGAACTTCTCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: VTRICAAGVYVPRHSSTILFQYF*RNFSAL
Trigger: GAGGGCGGAGAAGTTCCGGCAGAAGTACTGGAACAA...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTAACTCGTTCAGACAGTaGTCCCTGGTGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: MNVSQDKAASRLWVTRICNSFRQ*SLVSSR
Trigger: CCTGCTGGACACCAGGGAGCACTGTCTGAACGAGTT...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATGCCCGCAATACGCTCTaGCACGATGAGGGACTCGCT +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDARNTL*HDEGLA
Trigger: AGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGC...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTGCCCGCAATACGCTCTaGCACGATGAGGGACTCGCT +
Preference number: 4 (lower is better)
Translates to: YLVRAHGAASRQTYLYRSARNTL*HDEGLA
Trigger: AGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGC...AGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGCTCGCAGCGCAGGGCTaGGTGGTAGTTTGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: LCGWGVCAASQQYHINTLLAAQG*VVVCVD
Trigger: GTCCACACAAACTACCACGCAGCCCTGCGCTGCGAG...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCGCAGCGCAGGGCTaGGTGGTAGTTTGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDLAAQG*VVVCVD
Trigger: GTCCACACAAACTACCACGCAGCCCTGCGCTGCGAG...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGCGGCTGGGGTGTATGTaGCGCGTCACAGCAGTACCA +
Preference number: 4 (lower is better)
Translates to: LCGWGVCAASQQYHINTLRLGCM*RVTAVP
Trigger: TGGTACTGCTGTGACGCGGCACATACACCCCAGCCG...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGCTCCCAGGACAAAGCTaGGTCTCGCCTCTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: LCGWGVCAASQQYHINTLLPGQS*VSPLGH
Trigger: GTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAG...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATACTCTATTTGGTGCGTaGCCACGGTGCTGCGTCCCG +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDTLFGA*PRCCVP
Trigger: CGGGACGCAGCACCGTGGGCACGCACCAAATAGAGT...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCGATGGCGAAGCGCTTaGCGTTCTCCAGGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDRWRSA*RSPGCG
Trigger: TCCGCAACCTGGAGAACGCCAAGCGCTTCGCCATCG...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATACCCGCCTATGTCGATaGCGAAGCGCTTGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: QYERLPGQSCVSPLGHTHTRLCR*RSAWRS
Trigger: AGAACGCCAAGCGCTTCGCCATCGACATAGGCGGGT...ATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATACCCGCCTATGTCGATaGCGAAGCGCTTGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYTRLCR*RSAWRS
Trigger: AGAACGCCAAGCGCTTCGCCATCGACATAGGCGGGT...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CGCTCTGAGGCAGAATCCTGGGCAAGAGGGAGGAGCCTAGGACCGTGGCGACCTTCTGTGTTGACGAGATaGTCTTTGATGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RSEAESWARGRSLGPWRPSVLTR*SLMKSR
Trigger: CCTGGACTTCATCAAAGACCATCTCGTCAACACAGA...AGGTCGCCACGGTCCTAGGCTCCTCCCTCTTGCCCAGGATTCTGCCTCAGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CCA 90 bp ATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCTTCTCTTCGATGAGGTCTTTGACTCTTGGTCGGCGGTaGCCGACTTCCCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: ITSSLSTFSRSFSSMRSLTLGRR*PTSRSC
Trigger: GCAGCTTCGGGAAGTCGGCCACCGCCGACCAAGAGT...CAAAGACCTCATCGAAGAGAAGCTGCGGCTGAAAGTCGACAAGGAGGACGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp TTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTACTCTTGGTCGGCGGTaGCCGACTTCCCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LKTLFGACPRCCVPSDIPTLGRR*PTSRSC
Trigger: GCAGCTTCGGGAAGTCGGCCACCGCCGACCAAGAGT...AGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTCTGTGCAGCCGTGCGTaGAGGCAGGCCAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAALCSRA*RQASCP
Trigger: TGGGCAGCTGGCCTGCCTCCACGCACGGCTGCACAG...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GGCAGCTGCAGCGCCTCACTCGGCTGGGACCTCGTACTTGAAGATGACGCTGAATCTCCCCAGCTGTACTaGTTAGGATTGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GSCSASLGWDLVLEDDAESPQLY*LGLSCS
Trigger: TGAGCAGGACAATCCTAACCAGTACAGCTGGGGAGA...TTCAGCGTCATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGCGCTGCAGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp TTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTCGGCAGGTCAACCAGTaGCCTCTCCAGCCGGTCCAT +
Preference number: 4 (lower is better)
Translates to: LKTLFGACPRCCVPSDIPRQVNQ*PLQPVH
Trigger: ATGGACCGGCTGGAGAGGCCACTGGTTGACCTGCCG...AGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATACGCATCTGTGCGGCTaGGGTGTATGTGCCGCGTCA +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDTHLCG*GVCAAS
Trigger: TGACGCGGCACATACACCCCAGCCGCACAGATGCGT...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGTTTAAAAACTCTATTTaGTGCGTGCCCACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SQDKAASRLWVTRICAAGFKNSI*CVPTVL
Trigger: CAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCCGCAGTCTGAGGCAGAATCCTaGGCAAGAGGGAGGAGCCTA +
Preference number: 4 (lower is better)
Translates to: APLNQARHHVLLVDFQPQSEAES*ARGRSL
Trigger: TAGGCTCCTCCCTCTTGCCCAGGATTCTGCCTCAGA...CTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR TCA 90 bp CCGTGCGTGGAGGCAGGCCAGCTGCCCAATGTCGTTGCTGATCATGTGCAGCAGAGTGCAGTCGAGCAGTaGTCTCTTCTTGAACTGAAA +
Preference number: 4 (lower is better)
Translates to: PCVEAGQLPNVVADHVQQSAVEQ*SLLELK
Trigger: TTTCAGTTCAAGAAGAGATCACTGCTCGACTGCACT...CTGCTGCACATGATCAGCAACGACATTGGGCAGCTGGCCTGCCTCCACGCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR TCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATACTTCTTCGTTTTGGTaGGCAGAGCGCCAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDTSSFW*AERQAP
Trigger: GGGGGCTTGGCGCTCTGCTCACCAAAACGAAGAAGT...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CAGCAGCAGCCTCTCTTCCTGGAGCGCAGAGTGCACGACAGGGTCCATGCCCGCGGAAGACTCCCAAAATaGTGTCTATTCCACTGTTAT +
Preference number: 4 (lower is better)
Translates to: QQQPLFLERRVHDRVHARGRLPK*CLFHCY
Trigger: ATAACAGTGGAATAGACATCATTTTGGGAGTCTTCC...GCGGGCATGGACCCTGTCGTGCACTCTGCGCTCCAGGAAGAGAGGCTGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR TCA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTGTTCAGGGCGGGGCCTaGGTTGCACGCCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAAVQGGA*VARQDD
Trigger: GTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAAC...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp ACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGGGCCCATGCCCTCGATaGCCACCAGATCCGCGCCAC +
Preference number: 4 (lower is better)
Translates to: TQFPCGGKNTFLTSDKQKGPCPR*PPDPRH
Trigger: GTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCC...CTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTCACATTCCTGACAAGTaGCAAGCAGAAGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: MNVSQDKAASRLWVTRICHIPDK*QAEESG
Trigger: GCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTG...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp GTCGCCTGGATGACCTTGGTCTCTGTGTTGACGAGATGGTCTTTGATGAAGTCCGCAGCAGCAGAGGGATaGCTGCGAGACAAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: VAWMTLVSVLTRWSLMKSAAAEG*LRDKCQ
Trigger: CTGGCACTTGTCTCGCAGTCATCCCTCTGCTGCTGC...GGACTTCATCAAAGACCATCTCGTCAACACAGAGACCAAGGTCATCCAGGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR TCA 90 bp ACCTTGGTCTCTGTGTTGACGAGATGGTCTTTGATGAAGTCCAGGCAGGCTTCGGCAGCAGCAGAGGGATaGCTGCGAGACAAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: TLVSVLTRWSLMKSRQASAAAEG*LRDKCQ
Trigger: CTGGCACTTGTCTCGCAGTCATCCCTCTGCTGCTGC...CGAAGCCTGCCTGGACTTCATCAAAGACCATCTCGTCAACACAGAGACCAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR TCA 90 bp CTTGGTCTCTGTGTTGACGAGATGGTCTTTGATGAAGTCCAGGCAGGCTTCGATAACCAGGCGGCGCTCTaGGGCAGAATCCTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LGLCVDEMVFDEVQAGFDNQAAL*GRILGK
Trigger: CTTGCCCAGGATTCTGCCTCAGAGCGCCGCCTGGTT...ATCGAAGCCTGCCTGGACTTCATCAAAGACCATCTCGTCAACACAGAGACCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR GCA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGGCGTTCTCCAGGTTaGGGAAGATCTCGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTWRSPG*GRSRRG
Trigger: CCCCCGACGAGATCTTCCGCAACCTGGAGAACGCCA...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GGCTGTGCGCACCCTGCCCTAGTGGAGCTGGCTGTTCGCGCCAGCCTTCAACCATCAAACTTAATGAAGTaGAGTCGAGCAGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: GCAHPALVELAVRASLQPSNLMK*SRAVIS
Trigger: AGAGATCACTGCTCGACTGCACTTCATTAAGTTTGA...TGGTTGAAGGCTGGCGCGAACAGCCAGCTCCACTAGGGCAGGGTGCGCACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR GCA 90 bp ACCTTGGTCTCTGTGTTGACGAGATGGTCTTTGATGAAGTCCAGGCAGGCTTCGCCCCTCGAGGCCAGGTaGAGGAGCTCGTCAAACTTC +
Preference number: 4 (lower is better)
Translates to: TLVSVLTRWSLMKSRQASPLEAR*RSSSNF
Trigger: GAAGTTTGACGAGCTCCTGCACCTGGCCTCGAGGGG...CGAAGCCTGCCTGGACTTCATCAAAGACCATCTCGTCAACACAGAGACCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR GCA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCATGTCCACATTGCTGTaGTGGCCCCTCGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTMSTLL*WPLEAR
Trigger: CCTGGCCTCGAGGGGCCAGCACAGCAATGTGGACAT...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GAATCCTTCTGGTACACGAAGGCCTCATGGGGGATGTTCTTGAGCACGAAGTTGCCAGCATGTCCACATTaGTGTGCTGGCCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: ESFWYTKASWGMFLSTKLPACPH*CAGPSR
Trigger: CCTCGAGGGGCCAGCACAGCAATGTGGACATGCTGG...CAACTTCGTGCTCAAGAACATCCCCCATGAGGCCTTCGTGTACCAGAAGGATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR GCA 90 bp CACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCTCGTTGCTGATCATGTaGAGCAGGCTCTTCGCCATG +
Preference number: 4 (lower is better)
Translates to: HPLIRHVITSSLSTFSRSSLLIM*SRLFAM
Trigger: CATGGCGAAGAGCCTGCTGCACATGATCAGCAACGA...GCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR GCA 90 bp CTTGAGCACGAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCTGGAGGCAGGCCAGCTaGCCAATGTCGTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: LEHEVAPLNQARHHVLLVWRQAS*PMSLLI
Trigger: GATCAGCAACGACATTGGGCAGCTGGCCTGCCTCCA...GACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR GCA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGTGGAGGCAGGCCAGCTaGCCAATGTCGTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: LCGWGVCAASQQYHINTLWRQAS*PMSLLI
Trigger: GATCAGCAACGACATTGGGCAGCTGGCCTGCCTCCA...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTCAGAAACAGCGCCTaGACTTCCCCCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: QYERLPGQSCVSPLGHTHLRNSA*TSPLEK
Trigger: CTTCTCCAAGGGGGAAGTGCAGGCGCTGTTTCTGAG...ATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTTCATCAGCCCGGAGCTaGCTGCATAGTTCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: YLVRAHGAASRQTYLYRSSSARS*LHSSLP
Trigger: GGGGAGAGAACTATGCAGGCAGCTCCGGGCTGATGA...AGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTTGGCTGGCTCGCCACTaGGCGCTTCACTACCCCGTC +
Preference number: 4 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAAWLARH*ALHYPV
Trigger: GACGGGGTAGTGAAGCGCGCAGTGGCGAGCCAGCCA...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTTTGTTCCAGTACTTCTaGCGGAACTTCTCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: MNVSQDKAASRLWVTRICLFQYF*RNFSAL
Trigger: GAGGGCGGAGAAGTTCCGGCAGAAGTACTGGAACAA...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAAAACTCGTTCAGACAGTaGTCCCTGGTGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HASVRLGCMCRVTAVPYKNSFRQ*SLVSSR
Trigger: CCTGCTGGACACCAGGGAGCACTGTCTGAACGAGTT...TTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATAACTCGTTCAGACAGTaGTCCCTGGTGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QYERLPGQSCVSPLGHTHNSFRQ*SLVSSR
Trigger: CCTGCTGGACACCAGGGAGCACTGTCTGAACGAGTT...ATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTTTCACCAGCGCCAGCTaGCGTTCCTCCCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAAFTSAS*RSSQPS
Trigger: GCTGGGCTGGGAGGAACGGCAGCTGGCGCTGGTGAA...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCGCACGACAGGGTCCATaGCCGCAATACGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTARQGP*PQYALP
Trigger: TGGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGC...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTCGGCTGGGGTGTATGTaGCGCGTCACAGCAGTACCA +
Preference number: 4 (lower is better)
Translates to: LKTLFGACPRCCVPSDIPRLGCM*RVTAVP
Trigger: TGGTACTGCTGTGACGCGGCACATACACCCCAGCCG...AGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCGGTCACACGCATCTGTaGGGCTGGGGTGTATGTGCC +
Preference number: 4 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTGHTHL*GWGVCA
Trigger: GGCACATACACCCCAGCCGCACAGATGCGTGTGACC...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGGTCACACGCATCTGTaGGGCTGGGGTGTATGTGCC +
Preference number: 4 (lower is better)
Translates to: LKTLFGACPRCCVPSDIPGHTHL*GWGVCA
Trigger: GGCACATACACCCCAGCCGCACAGATGCGTGTGACC...AGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GAATCCTTCTGGTACACGAAGGCCTCATGGGGGATGTTCTTGAGCACGAAGTTGCGATGGCGAAGCGCTTaGCGTTCTCCAGGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: ESFWYTKASWGMFLSTKLRWRSA*RSPGCG
Trigger: TCCGCAACCTGGAGAACGCCAAGCGCTTCGCCATCG...CAACTTCGTGCTCAAGAACATCCCCCATGAGGCCTTCGTGTACCAGAAGGATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATCGAAAGACCGCACCTTaGCGACTTTGTGCTGTACCG +
Preference number: 4 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYRKTAP*RLCAVP
Trigger: CGGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCG...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATGTGTCCTTTCCGGAGTaGTCGAAAGACCGCACCTTG +
Preference number: 4 (lower is better)
Translates to: QYERLPGQSCVSPLGHTHVSFPE*SKDRTL
Trigger: CAAGGTGCGGTCTTTCGACCACTCCGGAAAGGACAC...ATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTCCGCCCCCGGTCGCCTaGATGACCTTGGTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAAPPPVA*MTLVSV
Trigger: CACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGG...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CGGCCTCTTTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGGGAAAATGTGGGGGTaGTTGGTCTGGAACCGGAAC +
Preference number: 4 (lower is better)
Translates to: RPLLKTLFGACPRCCVPSGKMWG*LVWNRN
Trigger: GTTCCGGTTCCAGACCAACCACCCCCACATTTTCCC...TGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAAAGAGGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000615291.3
CDS-3UTR CCA 90 bp CCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCTTGGGAAAATGTGGGGGTaGTTGGTCTGGAACCGGAAC +
Preference number: 4 (lower is better)
Translates to: PLNQARHHVLLVDFQPQLGKMWG*LVWNRN
Trigger: GTTCCGGTTCCAGACCAACCACCCCCACATTTTCCC...AAGCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp CACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATCTTTGGAGAACTCTTaGTCGGCGGTGGCCGACTTC +
Preference number: 4 (lower is better)
Translates to: HASVRLGCMCRVTAVPYKSLENS*SAVADF
Trigger: GAAGTCGGCCACCGCCGACCAAGAGTTCTCCAAAGA...TTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp ACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGCTGTGCAGCCGTGCGTaGAGGCAGGCCAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: TQFPCGGKNTFLTSDKQKLCSRA*RQASCP
Trigger: TGGGCAGCTGGCCTGCCTCCACGCACGGCTGCACAG...CTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CACTGCGCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTCTGTGCAGCCGTGCGTaGAGGCAGGCCAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: HCALHYLKRAETSPKLLFLCSRA*RQASCP
Trigger: TGGGCAGCTGGCCTGCCTCCACGCACGGCTGCACAG...AAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGCGCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR CCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGTGCAGCCGTGCGTaGAGGCAGGCCAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPLCSRA*RQASCP
Trigger: TGGGCAGCTGGCCTGCCTCCACGCACGGCTGCACAG...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGTCAGGAACGCTCCGATaGCTCCCAGGTAGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: LCGWGVCAASQQYHINTLSGTLR*LPGSLR
Trigger: ACGAAGGCTACCTGGGAGCCATCGGAGCGTTCCTGA...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTTCAGGAACGCTCCGATaGCTCCCAGGTAGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: YLVRAHGAASRQTYLYRSSGTLR*LPGSLR
Trigger: ACGAAGGCTACCTGGGAGCCATCGGAGCGTTCCTGA...AGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TCTGTCCCTCTAAGGAGTAGCTCCCTGACAAAGGGGAAGACTCCCAAAATGATGCGGCAGGTCAACCAGTaGCCTCTCCAGCCGGTCCAT +
Preference number: 4 (lower is better)
Translates to: SVPLRSSSLTKGKTPKMMRQVNQ*PLQPVH
Trigger: ATGGACCGGCTGGAGAGGCCACTGGTTGACCTGCCG...CATCATTTTGGGAGTCTTCCCCTTTGTCAGGGAGCTACTCCTTAGAGGGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CCA 90 bp GCCACTGCGCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTCGGCAGGTCAACCAGTaGCCTCTCCAGCCGGTCCAT +
Preference number: 4 (lower is better)
Translates to: ATARFTTSKEQRRLLNCFRQVNQ*PLQPVH
Trigger: ATGGACCGGCTGGAGAGGCCACTGGTTGACCTGCCG...AAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGCGCAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR CCA 90 bp CAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCCCGCTGCTTCACTTTaGAGTAGGGATCCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: QYERLPGQSCVSPLGHTHPAASL*SRDPGS
Trigger: ACTTCCCGGATCCCTACTCCAAAGTGAAGCAGCGGG...ATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CCTCTTTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACAGCAGCCTCTCTTCCTaGAGCGCAGAGTGCACGACA +
Preference number: 4 (lower is better)
Translates to: PLLKTLFGACPRCCVPSDSSLSS*SAECTT
Trigger: TGTCGTGCACTCTGCGCTCCAGGAAGAGAGGCTGCT...GTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAAAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615291.3
CDS-3UTR CCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATAGCAGCCTCTCTTCCTaGAGCGCAGAGTGCACGACA +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDSSLSS*SAECTT
Trigger: TGTCGTGCACTCTGCGCTCCAGGAAGAGAGGCTGCT...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCGAGGCACGGGGAGCTaGAGCCCGTCTGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPRGTGS*SPSAPA
Trigger: TGCTGGTGCAGACGGGCTCCAGCTCCCCGTGCCTCG...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTACGCATCTGTGCGGCTaGGGTGTATGTGCCGCGTCA +
Preference number: 4 (lower is better)
Translates to: LKTLFGACPRCCVPSDIPTHLCG*GVCAAS
Trigger: TGACGCGGCACATACACCCCAGCCGCACAGATGCGT...AGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCCGCAGTGTGTCCTATGTCGATaGCGAAGCGCTTGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: APLNQARHHVLLVDFQPQCVLCR*RSAWRS
Trigger: AGAACGCCAAGCGCTTCGCCATCGACATAGGACACA...CTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
3UTR CAA 72 bp ACGAAGGCCTCATGGGGGATGTTCTTGAGCACGAAGTaGCACCCCTTAATCAGGCACGTCATCACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: TKASWGMFLSTK*HPLIRHVITSS
Trigger: GGAGGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAGAACATCCCCCATGAGGCCTTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR TCA 90 bp TTCGATGAGGTCTTTGAACTTGTAGGCCCCGCCCCCGGTCGCCTGGATGACCTTTTTGTGCTGTACCGTTaGATAGTAGGCCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: FDEVFELVGPAPGRLDDLFVLYR*IVGQLG
Trigger: ACCAAGCTGGCCTACTATTCAACGGTACAGCACAAA...AAGGTCATCCAGGCGACCGGGGGCGGGGCCTACAAGTTCAAAGACCTCATCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR TCA 90 bp TGCGCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAACGGGCCGAGCTCGGGTaGTGCACTCATCAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: CALHYLKRAETSPKLLFERAELG*CTHQPG
Trigger: TCCGGGCTGATGAGTGCATCACCCGAGCTCGGCCCG...TTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR TCA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATAGGGATCCGGGAAGTTaGACTCGTTCAGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYRDPGS*TRSDSA
Trigger: AGCACTGTCTGAACGAGTTCAACTTCCCGGATCCCT...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGGAAGACTCCCAAAATaGTGTCTATTCCACTGTTAT +
Preference number: 4 (lower is better)
Translates to: LASGSHASVRLGCMCRVTGRLPK*CLFHCY
Trigger: ATAACAGTGGAATAGACATCATTTTGGGAGTCTTCC...TGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCACATTCCTGACAAGTaGCAAGCAGAAGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: QYERLPGQSCVSPLGHTHHIPDK*QAEESG
Trigger: GCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTG...ATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CGCTCTGAGGCAGAATCCTGGGCAAGAGGGAGGAGCCTAGGACCGTGGCGACCTTCAAACTTAATGAAGTaGAGTCGAGCAGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: RSEAESWARGRSLGPWRPSNLMK*SRAVIS
Trigger: AGAGATCACTGCTCGACTGCACTTCATTAAGTTTGA...AGGTCGCCACGGTCCTAGGCTCCTCCCTCTTGCCCAGGATTCTGCCTCAGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR GCA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCATCAAACTTAATGAAGTaGAGTCGAGCAGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: ASGSHASVRLGCMCRVTASNLMK*SRAVIS
Trigger: AGAGATCACTGCTCGACTGCACTTCATTAAGTTTGA...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TCTGTCCCTCTAAGGAGTAGCTCCCTGACAAAGGGGAAGACTCCCAAAATGATGCCAGCATGTCCACATTaGTGTGCTGGCCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: SVPLRSSSLTKGKTPKMMPACPH*CAGPSR
Trigger: CCTCGAGGGGCCAGCACAGCAATGTGGACATGCTGG...CATCATTTTGGGAGTCTTCCCCTTTGTCAGGGAGCTACTCCTTAGAGGGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp CACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATCGTTGCTGATCATGTaGAGCAGGCTCTTCGCCATG +
Preference number: 4 (lower is better)
Translates to: HASVRLGCMCRVTAVPYKSLLIM*SRLFAM
Trigger: CATGGCGAAGAGCCTGCTGCACATGATCAGCAACGA...TTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGGAACGCGGTCCAGGCTGTaGAGCCGTGCGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ALHYLKRAETSPKLLFEGTRSRL*SRAWRQ
Trigger: CTGCCTCCACGCACGGCTGCACAGCCTGGACCGCGT...TCCTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR GCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCAGAAACAGCGCCTaGACTTCCCCCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDLRNSA*TSPLEK
Trigger: CTTCTCCAAGGGGGAAGTGCAGGCGCTGTTTCTGAG...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp ACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGTGGCTGGCTCGCCACTaGGCGCTTCACTACCCCGTC +
Preference number: 4 (lower is better)
Translates to: TQFPCGGKNTFLTSDKQKWLARH*ALHYPV
Trigger: GACGGGGTAGTGAAGCGCGCAGTGGCGAGCCAGCCA...CTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTACGCTCCCGCACCAGTaGGGCCAGCCCCTTATCCAG +
Preference number: 4 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPTLPHQ*GQPLIQ
Trigger: CTGGATAAGGGGCTGGCCGCACTGGTGCGGGAGCGT...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CGCCACTGCGCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTGGCTGGCTCGCCACTaGGCGCTTCACTACCTCAAA +
Preference number: 4 (lower is better)
Translates to: RHCALHYLKRAETSPKLLWLARH*ALHYLK
Trigger: TTTGAGGTAGTGAAGCGCGCAGTGGCGAGCCAGCCA...AAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGCGCAGTGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR GCA 90 bp TCTGTCCCTCTAAGGAGTAGCTCCCTGACAAAGGGGAAGACTCCCAAAATGATGGAGGGAGAGAACAGGTaGAGGGTGCGGGGTTACCTG +
Preference number: 4 (lower is better)
Translates to: SVPLRSSSLTKGKTPKMMEGENR*RVRGYL
Trigger: CAGGTAACCCCGCACCCTGCACCTGTTCTCTCCCTC...CATCATTTTGGGAGTCTTCCCCTTTGTCAGGGAGCTACTCCTTAGAGGGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502512.1
ENST00000625442.1
CDS-3UTR CCA 90 bp GTCCTCCTTGTCGACTTTCAGCCGCAGCTTCTCTTCGATGAGGTCTTTGAACTTCGATGGCGAAGCGCTTaGCGTTCTCCAGGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: VLLVDFQPQLLFDEVFELRWRSA*RSPGCG
Trigger: TCCGCAACCTGGAGAACGCCAAGCGCTTCGCCATCG...AAGTTCAAAGACCTCATCGAAGAGAAGCTGCGGCTGAAAGTCGACAAGGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CCA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATAAATAGTAGGCCAGCTTaGTTAACGACCCGCCTATGT +
Preference number: 4 (lower is better)
Translates to: VTRICAAGVYVPRHSSTINSRPA*LTTRLC
Trigger: ACATAGGCGGGTCGTTAACCAAGCTGGCCTACTATT...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCGAAAGACCGCACCTTaGCGACTTTGTGCTGTACCG +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDRKTAP*RLCAVP
Trigger: CGGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCG...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TGTGTTGACGAGATGGTCTTTGATGAAGTCCAGGCAGGCTTCGATGTAGGTATTCCGCCCCCGGTCGCCTaGATGACCTTGGTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: CVDEMVFDEVQAGFDVGIPPPVA*MTLVSV
Trigger: CACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGG...AATACCTACATCGAAGCCTGCCTGGACTTCATCAAAGACCATCTCGTCAACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CCA 90 bp CACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAAAAATGTGGGGGTGGTTaGTCTGGAACCGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: HASVRLGCMCRVTAVPYKKCGGG*SGTGTQ
Trigger: CTGAGTTCCGGTTCCAGACCAACCACCCCCACATTT...TTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTTCCACATTGCTGTGCTaGCCCCTCGAGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAASTLLC*PLEARC
Trigger: GCACCTGGCCTCGAGGGGCCAGCACAGCAATGTGGA...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATTCTTTGGAGAACTCTTaGTCGGCGGTGGCCGACTTC +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDSLENS*SAVADF
Trigger: GAAGTCGGCCACCGCCGACCAAGAGTTCTCCAAAGA...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCAGCAGCCTCTCTTCCTaGAGCGCAGAGTGCACGACA +
Preference number: 4 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTSSLSS*SAECTT
Trigger: TGTCGTGCACTCTGCGCTCCAGGAAGAGAGGCTGCT...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
3UTR CAA 72 bp TCCTTCTGGTACACGAAGGCCTCATGGGGGATGTTCTaGAGCACGAAGTTGCACCCCTTAATCAGGCACGTC +
Preference number: 4 (lower is better)
Translates to: SFWYTKASWGMF*STKLHPLIRHV
Trigger: GACGTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAGAACATCCCCCATGAGGCCTTCGTGTACCAGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR TCA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATAAGTGCAGTCGAGCAGTaGTCTCTTCTTGAACTGAAA +
Preference number: 4 (lower is better)
Translates to: VTRICAAGVYVPRHSSTISAVEQ*SLLELK
Trigger: TTTCAGTTCAAGAAGAGATCACTGCTCGACTGCACT...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp TTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGCCCAATGTCGTTGCTaGTCATGTGCAGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LKTLFGACPRCCVPSDIPAQCRC*SCAAGS
Trigger: AGAGCCTGCTGCACATGATCAGCAACGACATTGGGC...AGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp GAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGGCCCAATGTCGTTGCTaGTCATGTGCAGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: EVAPLNQARHHVLLVDFQAQCRC*SCAAGS
Trigger: AGAGCCTGCTGCACATGATCAGCAACGACATTGGGC...CTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR TCA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCCCTCCTCAAAGCAGGTaGGCCAGTATTTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTPPQSR*ASIFGP
Trigger: TGGCCCGAAAATACTGGCTCACCTGCTTTGAGGAGG...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGTGCTGCCTCAGGGTCTaGAGCTTGTTCCAGTACTTC +
Preference number: 4 (lower is better)
Translates to: LCGWGVCAASQQYHINTLCCLRV*SLFQYF
Trigger: GAAGTACTGGAACAAGCTTCAGACCCTGAGGCAGCA...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGAGGGATCCGGGAAGTTaGACTCGTTCAGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: LCGWGVCAASQQYHINTLRDPGS*TRSDSA
Trigger: AGCACTGTCTGAACGAGTTCAACTTCCCGGATCCCT...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp AATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCAGGGCGGGGGAAGACTCCCAAAATaGTGTCTATTCCACTGTTAT +
Preference number: 4 (lower is better)
Translates to: NTLCHDEGLAVGHVVQGGGRLPK*CLFHCY
Trigger: ATAACAGTGGAATAGACATCATTTTGGGAGTCTTCC...CCCGCCCTGAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR TCA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTTACGCTCTGCCACGATaGGGGACTCGCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAAYALPR*GTRCGS
Trigger: TGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTA...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTTGGCGTTCTCCAGGTTaGGGAAGATCTCGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAAWRSPG*GRSRRG
Trigger: CCCCCGACGAGATCTTCCGCAACCTGGAGAACGCCA...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCAAGCCCCCAGAAGGTaGCGCCTCCAATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPQAPRR*RLQWSC
Trigger: GCAGCTCCATTGGAGGCGGCACCTTCTGGGGGCTTG...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGTCGTTGCTGATCATGTaGAGCAGGCTCTTCGCCATG +
Preference number: 4 (lower is better)
Translates to: LCGWGVCAASQQYHINTLSLLIM*SRLFAM
Trigger: CATGGCGAAGAGCCTGCTGCACATGATCAGCAACGA...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCAACTCGTTCAGACAGTaGTCCCTGGTGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTNSFRQ*SLVSSR
Trigger: CCTGCTGGACACCAGGGAGCACTGTCTGAACGAGTT...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTGCACGACAGGGTCCATaGCCGCAATACGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAAARQGP*PQYALP
Trigger: TGGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGC...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTCGGCTGGGGTGTATGTaGCGCGTCACAGCAGTACCA +
Preference number: 4 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAARLGCM*RVTAVP
Trigger: TGGTACTGCTGTGACGCGGCACATACACCCCAGCCG...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TTCGATGTAGGTATTCTCAAACTTAATGAAGTGCAGTCGAGCAGTGATCTCTTCGAGAAGCGGCTGCCCTaGCCCGGGTGGCCACAGTGC +
Preference number: 4 (lower is better)
Translates to: FDVGILKLNEVQSSSDLFEKRLP*PGWPQC
Trigger: GCACTGTGGCCACCCGGGGCAGGGCAGCCGCTTCTC...GAAGAGATCACTGCTCGACTGCACTTCATTAAGTTTGAGAATACCTACATCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CCA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTAATAGTAGGCCAGCTTaGTTAACGACCCGCCTATGT +
Preference number: 4 (lower is better)
Translates to: MNVSQDKAASRLWVTRICNSRPA*LTTRLC
Trigger: ACATAGGCGGGTCGTTAACCAAGCTGGCCTACTATT...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTTGGGGGTGGTTGGTCTaGAACCGGAACTCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAAWGWLV*NRNSGS
Trigger: CGACCCTGAGTTCCGGTTCCAGACCAACCACCCCCA...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATTCTCCACCTTCACGATaGAGACTCCAGAGCCGATAT +
Preference number: 4 (lower is better)
Translates to: QYERLPGQSCVSPLGHTHSPPSR*RLQSRY
Trigger: ATATCGGCTCTGGAGTCTCCATCGTGAAGGTGGAGA...ATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp ACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGTCCACATTGCTGTGCTaGCCCCTCGAGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: TQFPCGGKNTFLTSDKQKSTLLC*PLEARC
Trigger: GCACCTGGCCTCGAGGGGCCAGCACAGCAATGTGGA...CTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATTCGCCATGTCTTCTTTaGAGAACTCTTGGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDSPCLL*RTLGRR
Trigger: CCGCCGACCAAGAGTTCTCCAAAGAAGACATGGCGA...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTTCGCCATGTCTTCTTTaGAGAACTCTTGGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: YLVRAHGAASRQTYLYRSSPCLL*RTLGRR
Trigger: CCGCCGACCAAGAGTTCTCCAAAGAAGACATGGCGA...AGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GCCACTGCGCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTCAGGAACGCTCCGATaGCTCCCAGGTAGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: ATARFTTSKEQRRLLNCFSGTLR*LPGSLR
Trigger: ACGAAGGCTACCTGGGAGCCATCGGAGCGTTCCTGA...AAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGCGCAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR CCA 90 bp ACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGTCCACAGAGTCTGGCTaGCTCGCCACTGCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: TQFPCGGKNTFLTSDKQKSTESG*LATARF
Trigger: GAAGCGCGCAGTGGCGAGCCAGCCAGACTCTGTGGA...CTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTCCCGCTGCTTCACTTTaGAGTAGGGATCCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LKTLFGACPRCCVPSDIPPAASL*SRDPGS
Trigger: ACTTCCCGGATCCCTACTCCAAAGTGAAGCAGCGGG...AGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCAGCGCCTCACTCGGCTaGGACCTCGTACTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTSASLG*DLVLED
Trigger: ATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGCGCT...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGGGTCGGAATCCTTCTaGTACACGAAGGCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: FPCGGKNTFLTSDKQKSPGSESF*YTKAPP
Trigger: GGGCGGGGCCTTCGTGTACCAGAAGGATTCCGACCC...CGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435556.8
ENST00000630982.2
CDS-3UTR CCA 90 bp AGCACGAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTGTGTCCTATGTCGATaGCGAAGCGCTTGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: STKLHPLIRHVITSSLSTCVLCR*RSAWRS
Trigger: AGAACGCCAAGCGCTTCGCCATCGACATAGGACACA...AGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp GGCTTCGATGTAGGTATTCTCAAACTTAATGAAGTGCAGTCGAGCAGTGATCTCAGGAGCCTAGGACCGTaGCGACCTCAGGGCCACCCA +
Preference number: 4 (lower is better)
Translates to: GFDVGILKLNEVQSSSDLRSLGP*RPQGHP
Trigger: TGGGTGGCCCTGAGGTCGCCACGGTCCTAGGCTCCT...GAGATCACTGCTCGACTGCACTTCATTAAGTTTGAGAATACCTACATCGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR TCA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATTTTGTGCTGTACCGTTaGATAGTAGGCCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYFVLYR*IVGQLG
Trigger: ACCAAGCTGGCCTACTATTCAACGGTACAGCACAAA...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATTTTGTGCTGTACCGTTaGATAGTAGGCCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: QYERLPGQSCVSPLGHTHFVLYR*IVGQLG
Trigger: ACCAAGCTGGCCTACTATTCAACGGTACAGCACAAA...ATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp GAGCACGAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACGATCTCTTCTTGAACTaGAATCTCATAGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: EHEVAPLNQARHHVLLVDDLFLN*NLIGRL
Trigger: GAGCCGCCCTATGAGATTTCAGTTCAAGAAGAGATC...GTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR TCA 90 bp CACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAAGATCTCTTCTTGAACTaGAATCTCATAGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: HASVRLGCMCRVTAVPYKDLFLN*NLIGRL
Trigger: GAGCCGCCCTATGAGATTTCAGTTCAAGAAGAGATC...TTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTAGTGCAGTCGAGCAGTaGTCTCTTCTTGAACTGAAA +
Preference number: 4 (lower is better)
Translates to: MNVSQDKAASRLWVTRICSAVEQ*SLLELK
Trigger: TTTCAGTTCAAGAAGAGATCACTGCTCGACTGCACT...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp TCTGTCCCTCTAAGGAGTAGCTCCCTGACAAAGGGGAAGACTCCCAAAATGATGCATGGGGGATGTTCTTaGGCACGAAGTTGCACCCCT +
Preference number: 4 (lower is better)
Translates to: SVPLRSSSLTKGKTPKMMHGGCS*ARSCTP
Trigger: AGGGGTGCAACTTCGTGCTCAAGAACATCCCCCATG...CATCATTTTGGGAGTCTTCCCCTTTGTCAGGGAGCTACTCCTTAGAGGGACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR TCA 90 bp CTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGGAATGCGGGCCGAGCTCGGGTaGTGCACTCATCAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: LHYLKRAETSPKLLFEGMRAELG*CTHQPG
Trigger: TCCGGGCTGATGAGTGCATCACCCGAGCTCGGCCCG...CATTCCTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR TCA 90 bp CACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGGAATGTGCCCAGAGCGTCATCGGTaGGGTCCACCGTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: HYLKRAETSPKLLFEGMCPERHR*GPPCRA
Trigger: TGCCCGACACGGTGGACCTCACCGATGACGCTCTGG...GCACATTCCTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR TCA 90 bp ACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGGAATGTGCTAGCCCAGAGCGTCATCGGTaGGGTCCACCGTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: TSKEQRRLLNCFLKECASPERHR*GPPCRA
Trigger: TGCCCGACACGGTGGACCTCACCGATGACGCTCTGG...GCTAGCACATTCCTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR TCA 90 bp GCCACTGCGCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTCCTCCTCAAAGCAGGTaGGCCAGTATTTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: ATARFTTSKEQRRLLNCFPPQSR*ASIFGP
Trigger: TGGCCCGAAAATACTGGCTCACCTGCTTTGAGGAGG...AAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGCGCAGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR TCA 90 bp CTCCTTGTCGACTTTCAGCCGCAGCTTCTCTTCGATGAGGTCTTTGAACTTGTATCCTACAAAGGGTCTTaGAGGGACACGGCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LLVDFQPQLLFDEVFELVSYKGS*RDTAEG
Trigger: GCCTTCCGCCGTGTCCCTTCAAGACCCTTTGTAGGA...TACAAGTTCAAAGACCTCATCGAAGAGAAGCTGCGGCTGAAAGTCGACAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR GCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCCAGCATGTCCACATTaGTGTGCTGGCCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPPACPH*CAGPSR
Trigger: CCTCGAGGGGCCAGCACAGCAATGTGGACATGCTGG...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp ACCTTGGTCTCTGTGTTGACGAGATGGTCTTTGATGAAGTCCAGGCAGGCTTCGTCGTTGCTGATCATGTaGAGCAGGCTCTTCGCCATG +
Preference number: 4 (lower is better)
Translates to: TLVSVLTRWSLMKSRQASSLLIM*SRLFAM
Trigger: CATGGCGAAGAGCCTGCTGCACATGATCAGCAACGA...CGAAGCCTGCCTGGACTTCATCAAAGACCATCTCGTCAACACAGAGACCAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR GCA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTTGGAGGCAGGCCAGCTaGCCAATGTCGTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAAWRQAS*PMSLLI
Trigger: GATCAGCAACGACATTGGGCAGCTGGCCTGCCTCCA...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp ACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGGAATGTGCTACGCGGTCCAGGCTGTaGAGCCGTGCGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TTSKEQRRLLNCFLKECATRSRL*SRAWRQ
Trigger: CTGCCTCCACGCACGGCTGCACAGCCTGGACCGCGT...AGCACATTCCTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR GCA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATTGGTTAGGATTGTCCTaGTCAGCTCCTTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYWLGLS*SAPFRN
Trigger: GTTCCTGAAAGGAGCTGAGCAGGACAATCCTAACCA...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTGGTCACACGCATCTGTaGGGCTGGGGTGTATGTGCC +
Preference number: 4 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPGHTHL*GWGVCA
Trigger: GGCACATACACCCCAGCCGCACAGATGCGTGTGACC...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATAAAAACTCTATTTGGTaGGTGCCCACGGTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDKNSIW*VPTVLR
Trigger: ACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTT...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CTTGGTCTCTGTGTTGACGAGATGGTCTTTGATGAAGTCCAGGCAGGCTTCGATCGAAAGACCGCACCTTaGCGACTTTGTGCTGTACCG +
Preference number: 4 (lower is better)
Translates to: LGLCVDEMVFDEVQAGFDRKTAP*RLCAVP
Trigger: CGGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCG...ATCGAAGCCTGCCTGGACTTCATCAAAGACCATCTCGTCAACACAGAGACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CCA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTTCTGTGTTGACGAGATaGTCTTTGATGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: MNVSQDKAASRLWVTRICSVLTR*SLMKSR
Trigger: CCTGGACTTCATCAAAGACCATCTCGTCAACACAGA...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TCGTCAAACTTCTTCGTTTTGGTGAGCAGAGCGCCAAGCCCCCAGAAGGTGCCGTCTGTGTTGACGAGATaGTCTTTGATGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SSNFFVLVSRAPSPQKVPSVLTR*SLMKSR
Trigger: CCTGGACTTCATCAAAGACCATCTCGTCAACACAGA...CGGCACCTTCTGGGGGCTTGGCGCTCTGCTCACCAAAACGAAGAAGTTTGACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTTGGGGGTGGTTGGTCTaGAACCGGAACTCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPWGWLV*NRNSGS
Trigger: CGACCCTGAGTTCCGGTTCCAGACCAACCACCCCCA...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGTGGGGGTGGTTGGTCTaGAACCGGAACTCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: FPCGGKNTFLTSDKQKSPWGWLV*NRNSGS
Trigger: CGACCCTGAGTTCCGGTTCCAGACCAACCACCCCCA...CGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCAAATGTGGGGGTGGTTaGTCTGGAACCGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTKCGGG*SGTGTQ
Trigger: CTGAGTTCCGGTTCCAGACCAACCACCCCCACATTT...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTCGCCATGTCTTCTTTaGAGAACTCTTGGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTSPCLL*RTLGRR
Trigger: CCGCCGACCAAGAGTTCTCCAAAGAAGACATGGCGA...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp ACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGCGCATGGTCACGGGGTaGCCCCGGATAAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: TQFPCGGKNTFLTSDKQKRMVTG*PRIKKP
Trigger: AGGCTTCTTTATCCGGGGCCACCCCGTGACCATGCG...CTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCGCATGGTCACGGGGTaGCCCCGGATAAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPRMVTG*PRIKKP
Trigger: AGGCTTCTTTATCCGGGGCCACCCCGTGACCATGCG...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTTCTCCCCAGCTGTACTaGTTAGGATTGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: YLVRAHGAASRQTYLYRSSPQLY*LGLSCS
Trigger: TGAGCAGGACAATCCTAACCAGTACAGCTGGGGAGA...AGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGGACGGCAGGTCAACCAGTaGCCTCTCCAGCCGGTCCAT +
Preference number: 4 (lower is better)
Translates to: ALHYLKRAETSPKLLFEGRQVNQ*PLQPVH
Trigger: ATGGACCGGCTGGAGAGGCCACTGGTTGACCTGCCG...TCCTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR CCA 90 bp TCTGTCCCTCTAAGGAGTAGCTCCCTGACAAAGGGGAAGACTCCCAAAATGATGCCCGCTGCTTCACTTTaGAGTAGGGATCCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SVPLRSSSLTKGKTPKMMPAASL*SRDPGS
Trigger: ACTTCCCGGATCCCTACTCCAAAGTGAAGCAGCGGG...CATCATTTTGGGAGTCTTCCCCTTTGTCAGGGAGCTACTCCTTAGAGGGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CCA 90 bp ACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGATGAGGGACTCGCTGTaGGTCACGTCGTTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: TQFPCGGKNTFLTSDKQKMRDSL*VTSFRA
Trigger: CGCCCTGAACGACGTGACCCACAGCGAGTCCCTCAT...CTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTAGCAGCCTCTCTTCCTaGAGCGCAGAGTGCACGACA +
Preference number: 4 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAASSLSS*SAECTT
Trigger: TGTCGTGCACTCTGCGCTCCAGGAAGAGAGGCTGCT...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp ACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGACGCATCTGTGCGGCTaGGGTGTATGTGCCGCGTCA +
Preference number: 4 (lower is better)
Translates to: TQFPCGGKNTFLTSDKQKTHLCG*GVCAAS
Trigger: TGACGCGGCACATACACCCCAGCCGCACAGATGCGT...CTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp ACCTTGGTCTCTGTGTTGACGAGATGGTCTTTGATGAAGTCCAGGCAGGCTTCGATGCCCCACACTCTCTaGGTGTCCTGGAGACTAAAG +
Preference number: 4 (lower is better)
Translates to: TLVSVLTRWSLMKSRQASMPHTL*VSWRLK
Trigger: CTTTAGTCTCCAGGACACCCAGAGAGTGTGGGGCAT...CGAAGCCTGCCTGGACTTCATCAAAGACCATCTCGTCAACACAGAGACCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR TCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATGATCTCTTCTTGAACTaGAATCTCATAGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDDLFLN*NLIGRL
Trigger: GAGCCGCCCTATGAGATTTCAGTTCAAGAAGAGATC...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTACTTCTTCGTTTTGGTaGGCAGAGCGCCAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPTSSFW*AERQAP
Trigger: GGGGGCTTGGCGCTCTGCTCACCAAAACGAAGAAGT...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATAGGAAGACTCCCAAAATaGTGTCTATTCCACTGTTAT +
Preference number: 4 (lower is better)
Translates to: VTRICAAGVYVPRHSSTIGRLPK*CLFHCY
Trigger: ATAACAGTGGAATAGACATCATTTTGGGAGTCTTCC...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGGAATGACGCCACGTCCTCACTaGCCCACCAGGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LHYLKRAETSPKLLFEGMTPRPH*PTRWPG
Trigger: TCCTGGCCACCTGGTGGGTCAGTGAGGACGTGGCGT...CATTCCTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR GCA 90 bp TTCGATGAGGTCTTTGAACTTGTAGGCCCCGCCCCCGGTCGCCTGGATGACCTTTCAAACTTAATGAAGTaGAGTCGAGCAGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: FDEVFELVGPAPGRLDDLSNLMK*SRAVIS
Trigger: AGAGATCACTGCTCGACTGCACTTCATTAAGTTTGA...AAGGTCATCCAGGCGACCGGGGGCGGGGCCTACAAGTTCAAAGACCTCATCGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR GCA 90 bp ACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGTGGAGGCAGGCCAGCTaGCCAATGTCGTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: TQFPCGGKNTFLTSDKQKWRQAS*PMSLLI
Trigger: GATCAGCAACGACATTGGGCAGCTGGCCTGCCTCCA...CTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp GCGCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGTGGAGGCAGGCCAGCTaGCCAATGTCGTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: ARFTTSKEQRRLLNCFLKWRQAS*PMSLLI
Trigger: GATCAGCAACGACATTGGGCAGCTGGCCTGCCTCCA...CTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR GCA 90 bp CACTGCGCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTTCATCAGCCCGGAGCTaGCTGCATAGTTCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: HCALHYLKRAETSPKLLFSSARS*LHSSLP
Trigger: GGGGAGAGAACTATGCAGGCAGCTCCGGGCTGATGA...AAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGCGCAGTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR GCA 90 bp ACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGTCATCAGCCCGGAGCTaGCTGCATAGTTCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: TQFPCGGKNTFLTSDKQKSSARS*LHSSLP
Trigger: GGGGAGAGAACTATGCAGGCAGCTCCGGGCTGATGA...CTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TCTGTCCCTCTAAGGAGTAGCTCCCTGACAAAGGGGAAGACTCCCAAAATGATGTTGTTCCAGTACTTCTaGCGGAACTTCTCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: SVPLRSSSLTKGKTPKMMLFQYF*RNFSAL
Trigger: GAGGGCGGAGAAGTTCCGGCAGAAGTACTGGAACAA...CATCATTTTGGGAGTCTTCCCCTTTGTCAGGGAGCTACTCCTTAGAGGGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR GCA 90 bp TTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTAAAAACTCTATTTGGTaGGTGCCCACGGTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: LKTLFGACPRCCVPSDIPKNSIW*VPTVLR
Trigger: ACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTT...AGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CACTGCGCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTTGGCTGGCTCGCCACTaGGCGCTTCACTACCTCAAA +
Preference number: 4 (lower is better)
Translates to: HCALHYLKRAETSPKLLFWLARH*ALHYLK
Trigger: TTTGAGGTAGTGAAGCGCGCAGTGGCGAGCCAGCCA...AAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGCGCAGTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR GCA 90 bp TTCGATGTAGGTATTCTCAAACTTAATGAAGTGCAGTCGAGCAGTGATCTCTTCCCCGGGTGGCCACAGTaGAGGCTCACCTTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: FDVGILKLNEVQSSSDLFPGWPQ*RLTFPE
Trigger: CTCCGGAAAGGTGAGCCTGCACTGTGGCCACCCGGG...GAAGAGATCACTGCTCGACTGCACTTCATTAAGTTTGAGAATACCTACATCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CCA 90 bp ACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGACCCGCCTATGTCGATaGCGAAGCGCTTGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: TQFPCGGKNTFLTSDKQKTRLCR*RSAWRS
Trigger: AGAACGCCAAGCGCTTCGCCATCGACATAGGCGGGT...CTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTGTGTCCTTTCCGGAGTaGTCGAAAGACCGCACCTTG +
Preference number: 4 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAAVSFPE*SKDRTL
Trigger: CAAGGTGCGGTCTTTCGACCACTCCGGAAAGGACAC...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATCTGTGTTGACGAGATaGTCTTTGATGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HASVRLGCMCRVTAVPYKSVLTR*SLMKSR
Trigger: CCTGGACTTCATCAAAGACCATCTCGTCAACACAGA...TTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTGGGAAAATGTGGGGGTaGTTGGTCTGGAACCGGAAC +
Preference number: 4 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAAGKMWG*LVWNRN
Trigger: GTTCCGGTTCCAGACCAACCACCCCCACATTTTCCC...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCTTCTCTTCTCCACCTTCACGATaGAGACTCCAGAGCCGATAT +
Preference number: 4 (lower is better)
Translates to: LIRHVITSSLSTFSRSFSSPPSR*RLQSRY
Trigger: ATATCGGCTCTGGAGTCTCCATCGTGAAGGTGGAGA...AGAGAAGCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTCTCCACCTTCACGATaGAGACTCCAGAGCCGATAT +
Preference number: 4 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTSPPSR*RLQSRY
Trigger: ATATCGGCTCTGGAGTCTCCATCGTGAAGGTGGAGA...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TGCGCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAACGCATGGTCACGGGGTaGCCCCGGATAAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: CALHYLKRAETSPKLLFERMVTG*PRIKKP
Trigger: AGGCTTCTTTATCCGGGGCCACCCCGTGACCATGCG...TTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR CCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTTCAGGAACGCTCCGATaGCTCCCAGGTAGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPSGTLR*LPGSLR
Trigger: ACGAAGGCTACCTGGGAGCCATCGGAGCGTTCCTGA...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GCGCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGTCAGGAACGCTCCGATaGCTCCCAGGTAGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: ARFTTSKEQRRLLNCFLKSGTLR*LPGSLR
Trigger: ACGAAGGCTACCTGGGAGCCATCGGAGCGTTCCTGA...CTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR CCA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTCCCGCTGCTTCACTTTaGAGTAGGGATCCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAAPAASL*SRDPGS
Trigger: ACTTCCCGGATCCCTACTCCAAAGTGAAGCAGCGGG...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATTTTAAAAACTCTATTTaGTGCGTGCCCACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: QYERLPGQSCVSPLGHTHFKNSI*CVPTVL
Trigger: CAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA...ATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCGATCTCTTCTTGAACTaGAATCTCATAGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTDLFLN*NLIGRL
Trigger: GAGCCGCCCTATGAGATTTCAGTTCAAGAAGAGATC...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGAGTGCAGTCGAGCAGTaGTCTCTTCTTGAACTGAAA +
Preference number: 4 (lower is better)
Translates to: LCGWGVCAASQQYHINTLSAVEQ*SLLELK
Trigger: TTTCAGTTCAAGAAGAGATCACTGCTCGACTGCACT...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGCTCCAGAGCCGATATTaGCAAGAAGATAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: LCGWGVCAASQQYHINTLLQSRY*QEDRGK
Trigger: TTTTCCCCTATCTTCTTGTCAATATCGGCTCTGGAG...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCCAGAGCCGATATTaGCAAGAAGATAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDLQSRY*QEDRGK
Trigger: TTTTCCCCTATCTTCTTGTCAATATCGGCTCTGGAG...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp GCAGGCTTCGATGTAGGTATTCTCAAACTTAATGAAGTGCAGTCGAGCAGTGATACTTCTTCGTTTTGGTaGGCAGAGCGCCAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: AGFDVGILKLNEVQSSSDTSSFW*AERQAP
Trigger: GGGGGCTTGGCGCTCTGCTCACCAAAACGAAGAAGT...ATCACTGCTCGACTGCACTTCATTAAGTTTGAGAATACCTACATCGAAGCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR TCA 90 bp ACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGCCTCCTCAAAGCAGGTaGGCCAGTATTTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: TQFPCGGKNTFLTSDKQKPPQSR*ASIFGP
Trigger: TGGCCCGAAAATACTGGCTCACCTGCTTTGAGGAGG...CTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTTGCTGCCTCAGGGTCTaGAGCTTGTTCCAGTACTTC +
Preference number: 4 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAACCLRV*SLFQYF
Trigger: GAAGTACTGGAACAAGCTTCAGACCCTGAGGCAGCA...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGCTCAGAAACAGCGCCTaGACTTCCCCCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: FPCGGKNTFLTSDKQKSPLRNSA*TSPLEK
Trigger: CTTCTCCAAGGGGGAAGTGCAGGCGCTGTTTCTGAG...CGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp ACTGCGCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGCTCAGAAACAGCGCCTaGACTTCCCCCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TARFTTSKEQRRLLNCFLLRNSA*TSPLEK
Trigger: CTTCTCCAAGGGGGAAGTGCAGGCGCTGTTTCTGAG...CAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGCGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR CCA 90 bp TTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTAATAGTAGGCCAGCTTaGTTAACGACCCGCCTATGT +
Preference number: 4 (lower is better)
Translates to: LKTLFGACPRCCVPSDIPNSRPA*LTTRLC
Trigger: ACATAGGCGGGTCGTTAACCAAGCTGGCCTACTATT...AGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGCGAAAGACCGCACCTTaGCGACTTTGTGCTGTACCG +
Preference number: 4 (lower is better)
Translates to: FPCGGKNTFLTSDKQKSPRKTAP*RLCAVP
Trigger: CGGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCG...CGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CAGGCAGGCTTCGATGTAGGTATTCTCAAACTTAATGAAGTGCAGTCGAGCAGTCGAAAGACCGCACCTTaGCGACTTTGTGCTGTACCG +
Preference number: 4 (lower is better)
Translates to: QAGFDVGILKLNEVQSSSRKTAP*RLCAVP
Trigger: CGGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCG...ACTGCTCGACTGCACTTCATTAAGTTTGAGAATACCTACATCGAAGCCTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CCA 90 bp ACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGGTGTCCTTTCCGGAGTaGTCGAAAGACCGCACCTTG +
Preference number: 4 (lower is better)
Translates to: TQFPCGGKNTFLTSDKQKVSFPE*SKDRTL
Trigger: CAAGGTGCGGTCTTTCGACCACTCCGGAAAGGACAC...CTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CTTGAGCACGAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCTCTGTGTTGACGAGATaGTCTTTGATGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LEHEVAPLNQARHHVLLVSVLTR*SLMKSR
Trigger: CCTGGACTTCATCAAAGACCATCTCGTCAACACAGA...GACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTTCTTTGGAGAACTCTTaGTCGGCGGTGGCCGACTTC +
Preference number: 4 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPSLENS*SAVADF
Trigger: GAAGTCGGCCACCGCCGACCAAGAGTTCTCCAAAGA...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp CGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGGAACGCATGGTCACGGGGTaGCCCCGGATAAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: RFTTSKEQRRLLNCFLKERMVTG*PRIKKP
Trigger: AGGCTTCTTTATCCGGGGCCACCCCGTGACCATGCG...TTCCTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR CCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTAGCGCCTCACTCGGCTaGGACCTCGTACTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPSASLG*DLVLED
Trigger: ATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGCGCT...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATTTTAAAAACTCTATTTaGTGCGTGCCCACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDFKNSI*CVPTVL
Trigger: CAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp AATCTCATAGGGCGGCTCATGTTCACGTTCTGTGTCCTGGAAAACAGAGTAGGGAAAACCCTATGTCGATaGCGAAGCGCTTGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: NLIGRLMFTFCVLENRVGKTLCR*RSAWRS
Trigger: AGAACGCCAAGCGCTTCGCCATCGACATAGGGTTTT...CCCTACTCTGTTTTCCAGGACACAGAACGTGAACATGAGCCGCCCTATGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR TCA 90 bp CTTGGTCTCTGTGTTGACGAGATGGTCTTTGATGAAGTCCAGGCAGGCTTCGATTTTGTGCTGTACCGTTaGATAGTAGGCCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LGLCVDEMVFDEVQAGFDFVLYR*IVGQLG
Trigger: ACCAAGCTGGCCTACTATTCAACGGTACAGCACAAA...ATCGAAGCCTGCCTGGACTTCATCAAAGACCATCTCGTCAACACAGAGACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR TCA 90 bp CTCCGTCTCCACCTTCACGATGGAGACTCCAGAGCCGATATTGACAAGAAGATAGATCTCTTCTTGAACTaGAATCTCATAGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: LRLHLHDGDSRADIDKKIDLFLN*NLIGRL
Trigger: GAGCCGCCCTATGAGATTTCAGTTCAAGAAGAGATC...TATCTTCTTGTCAATATCGGCTCTGGAGTCTCCATCGTGAAGGTGGAGACGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR TCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTTGCTGCCTCAGGGTCTaGAGCTTGTTCCAGTACTTC +
Preference number: 4 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPCCLRV*SLFQYF
Trigger: GAAGTACTGGAACAAGCTTCAGACCCTGAGGCAGCA...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTAGGGATCCGGGAAGTTaGACTCGTTCAGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPRDPGS*TRSDSA
Trigger: AGCACTGTCTGAACGAGTTCAACTTCCCGGATCCCT...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCACATTCCTGACAAGTaGCAAGCAGAAGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPHIPDK*QAEESG
Trigger: GCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTG...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATATAAATACGTTGATTTaGACGCAGTTTCCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: QYERLPGQSCVSPLGHTHINTLI*TQFPCG
Trigger: ACCACAGGGAAACTGCGTTCAAATCAACGTATTTAT...ATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAAATAAATACGTTGATTTaGACGCAGTTTCCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: HASVRLGCMCRVTAVPYKINTLI*TQFPCG
Trigger: ACCACAGGGAAACTGCGTTCAAATCAACGTATTTAT...TTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATATAAATACGTTGATTTaGACGCAGTTTCCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYINTLI*TQFPCG
Trigger: ACCACAGGGAAACTGCGTTCAAATCAACGTATTTAT...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp ATGGTCTTTGATGAAGTCCAGGCAGGCTTCGATGTAGGTATTCTCAAACTTAATTGGCGTTCTCCAGGTTaGGGAAGATCTCGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: MVFDEVQAGFDVGILKLNWRSPG*GRSRRG
Trigger: CCCCCGACGAGATCTTCCGCAACCTGGAGAACGCCA...ATTAAGTTTGAGAATACCTACATCGAAGCCTGCCTGGACTTCATCAAAGACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR GCA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATTCAAACTTAATGAAGTaGAGTCGAGCAGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYSNLMK*SRAVIS
Trigger: AGAGATCACTGCTCGACTGCACTTCATTAAGTTTGA...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGTCGTTGCTGATCATGTaGAGCAGGCTCTTCGCCATG +
Preference number: 4 (lower is better)
Translates to: FPCGGKNTFLTSDKQKSPSLLIM*SRLFAM
Trigger: CATGGCGAAGAGCCTGCTGCACATGATCAGCAACGA...CGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp ACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGTTGTTCCAGTACTTCTaGCGGAACTTCTCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: TQFPCGGKNTFLTSDKQKLFQYF*RNFSAL
Trigger: GAGGGCGGAGAAGTTCCGGCAGAAGTACTGGAACAA...CTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGGAATGCCCTTAGAAGCAACGTaGCTCGCAGACGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: LHYLKRAETSPKLLFEGMPLEAT*LADATS
Trigger: GGACGTGGCGTCTGCGAGGCACGTTGCTTCTAAGGG...CATTCCTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR CCA 90 bp ACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAAATGTGGGGGTGGTTaGTCTGGAACCGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: TQFPCGGKNTFLTSDKQKKCGGG*SGTGTQ
Trigger: CTGAGTTCCGGTTCCAGACCAACCACCCCCACATTT...CTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GACGAGATGGTCTTTGATGAAGTCCAGGCAGGCTTCGATGTAGGTATTCTCAAAAAATGTGGGGGTGGTTaGTCTGGAACCGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: DEMVFDEVQAGFDVGILKKCGGG*SGTGTQ
Trigger: CTGAGTTCCGGTTCCAGACCAACCACCCCCACATTT...TTTGAGAATACCTACATCGAAGCCTGCCTGGACTTCATCAAAGACCATCTCGTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp TTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTTTTAAAAACTCTATTTaGTGCGTGCCCACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LKTLFGACPRCCVPSDIPFKNSI*CVPTVL
Trigger: CAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA...AGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGGGAAGACTCCCAAAATaGTGTCTATTCCACTGTTAT +
Preference number: 4 (lower is better)
Translates to: LCGWGVCAASQQYHINTLGRLPK*CLFHCY
Trigger: ATAACAGTGGAATAGACATCATTTTGGGAGTCTTCC...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGATAAATACGTTGATTTaGACGCAGTTTCCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LCGWGVCAASQQYHINTLINTLI*TQFPCG
Trigger: ACCACAGGGAAACTGCGTTCAAATCAACGTATTTAT...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTTCAAACTTAATGAAGTaGAGTCGAGCAGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: YLVRAHGAASRQTYLYRSSNLMK*SRAVIS
Trigger: AGAGATCACTGCTCGACTGCACTTCATTAAGTTTGA...AGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp ACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGGAATGTGCTTGGAGGCAGGCCAGCTaGCCAATGTCGTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: TTSKEQRRLLNCFLKECAWRQAS*PMSLLI
Trigger: GATCAGCAACGACATTGGGCAGCTGGCCTGCCTCCA...AGCACATTCCTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR GCA 90 bp ACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGGAATGTGCTTCATCAGCCCGGAGCTaGCTGCATAGTTCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: TTSKEQRRLLNCFLKECASSARS*LHSSLP
Trigger: GGGGAGAGAACTATGCAGGCAGCTCCGGGCTGATGA...AGCACATTCCTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR CCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTTCTCCACCTTCACGATaGAGACTCCAGAGCCGATAT +
Preference number: 4 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPSPPSR*RLQSRY
Trigger: ATATCGGCTCTGGAGTCTCCATCGTGAAGGTGGAGA...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp GCGCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGTCTCCCCAGCTGTACTaGTTAGGATTGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: ARFTTSKEQRRLLNCFLKSPQLY*LGLSCS
Trigger: TGAGCAGGACAATCCTAACCAGTACAGCTGGGGAGA...CTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR TCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTGATCTCTTCTTGAACTaGAATCTCATAGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPDLFLN*NLIGRL
Trigger: GAGCCGCCCTATGAGATTTCAGTTCAAGAAGAGATC...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTCTCCAGAGCCGATATTaGCAAGAAGATAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAALQSRY*QEDRGK
Trigger: TTTTCCCCTATCTTCTTGTCAATATCGGCTCTGGAG...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR TCA 90 bp CTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGGAATGCCTCCTCAAAGCAGGTaGGCCAGTATTTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LHYLKRAETSPKLLFEGMPPQSR*ASIFGP
Trigger: TGGCCCGAAAATACTGGCTCACCTGCTTTGAGGAGG...CATTCCTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR GCA 90 bp ACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGTGGTTAGGATTGTCCTaGTCAGCTCCTTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: TQFPCGGKNTFLTSDKQKWLGLS*SAPFRN
Trigger: GTTCCTGAAAGGAGCTGAGCAGGACAATCCTAACCA...CTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp TTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGTGGTTAGGATTGTCCTaGTCAGCTCCTTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: FPCGGKNTFLTSDKQKSPWLGLS*SAPFRN
Trigger: GTTCCTGAAAGGAGCTGAGCAGGACAATCCTAACCA...CGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTTGGTTAGGATTGTCCTaGTCAGCTCCTTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPWLGLS*SAPFRN
Trigger: GTTCCTGAAAGGAGCTGAGCAGGACAATCCTAACCA...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp ACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAATAGTAGGCCAGCTTaGTTAACGACCCGCCTATGT +
Preference number: 4 (lower is better)
Translates to: TQFPCGGKNTFLTSDKQKNSRPA*LTTRLC
Trigger: ACATAGGCGGGTCGTTAACCAAGCTGGCCTACTATT...CTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp TTCGATGTAGGTATTCTCAAACTTAATGAAGTGCAGTCGAGCAGTGATCTCTTCCTCACCTTTCCGGAGTaGTCGAAAGACCGCACCTTG +
Preference number: 4 (lower is better)
Translates to: FDVGILKLNEVQSSSDLFLTFPE*SKDRTL
Trigger: CAAGGTGCGGTCTTTCGACCACTCCGGAAAGGTGAG...GAAGAGATCACTGCTCGACTGCACTTCATTAAGTTTGAGAATACCTACATCGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR TCA 90 bp TCTGTCCCTCTAAGGAGTAGCTCCCTGACAAAGGGGAAGACTCCCAAAATGATGGGAAGACTCCCAAAATaGTGTCTATTCCACTGTTAT +
Preference number: 4 (lower is better)
Translates to: SVPLRSSSLTKGKTPKMMGRLPK*CLFHCY
Trigger: ATAACAGTGGAATAGACATCATTTTGGGAGTCTTCC...CATCATTTTGGGAGTCTTCCCCTTTGTCAGGGAGCTACTCCTTAGAGGGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CCA 90 bp TTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGTCTGTGTTGACGAGATaGTCTTTGATGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: FPCGGKNTFLTSDKQKSPSVLTR*SLMKSR
Trigger: CCTGGACTTCATCAAAGACCATCTCGTCAACACAGA...CGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp ACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGTCTGTGTTGACGAGATaGTCTTTGATGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TQFPCGGKNTFLTSDKQKSVLTR*SLMKSR
Trigger: CCTGGACTTCATCAAAGACCATCTCGTCAACACAGA...CTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CCA 90 bp ATGGTCTTTGATGAAGTCCAGGCAGGCTTCGATGTAGGTATTCTCAAACTTAATTCGCCATGTCTTCTTTaGAGAACTCTTGGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: MVFDEVQAGFDVGILKLNSPCLL*RTLGRR
Trigger: CCGCCGACCAAGAGTTCTCCAAAGAAGACATGGCGA...ATTAAGTTTGAGAATACCTACATCGAAGCCTGCCTGGACTTCATCAAAGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CCA 90 bp ACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGGAATGTGCTAGCTCTCCCCAGCTGTACTaGTTAGGATTGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TSKEQRRLLNCFLKECASSPQLY*LGLSCS
Trigger: TGAGCAGGACAATCCTAACCAGTACAGCTGGGGAGA...GCTAGCACATTCCTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR GCA 90 bp CGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGGAATGGTTAGGATTGTCCTaGTCAGCTCCTTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: RFTTSKEQRRLLNCFLKEWLGLS*SAPFRN
Trigger: GTTCCTGAAAGGAGCTGAGCAGGACAATCCTAACCA...TTCCTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR GCA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTTCAAACTTAATGAAGTaGAGTCGAGCAGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPSNLMK*SRAVIS
Trigger: AGAGATCACTGCTCGACTGCACTTCATTAAGTTTGA...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR GCA 90 bp ACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGGAATGTGCTTGGTTAGGATTGTCCTaGTCAGCTCCTTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: TTSKEQRRLLNCFLKECAWLGLS*SAPFRN
Trigger: GTTCCTGAAAGGAGCTGAGCAGGACAATCCTAACCA...AGCACATTCCTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR TCA 90 bp ATGGTCTTTGATGAAGTCCAGGCAGGCTTCGATGTAGGTATTCTCAAACTTAATCTCCAGAGCCGATATTaGCAAGAAGATAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: MVFDEVQAGFDVGILKLNLQSRY*QEDRGK
Trigger: TTTTCCCCTATCTTCTTGTCAATATCGGCTCTGGAG...ATTAAGTTTGAGAATACCTACATCGAAGCCTGCCTGGACTTCATCAAAGACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR GCA 90 bp GCGCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGAGACGTCTCCTAAATTaGTTTTTGAAGGAATGTGCT +
Preference number: 4 (lower is better)
Translates to: ARFTTSKEQRRLLNCFLKRRLLN*FLKECA
Trigger: AGCACATTCCTTCAAAAAGCAATTTAGGAGACGTCT...CTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGCGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR GCA 90 bp TTCGATGTAGGTATTCTCAAACTTAATGAAGTGCAGTCGAGCAGTGATCTCTTCTCAAACTTAATGAAGTaGAGTCGAGCAGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: FDVGILKLNEVQSSSDLFSNLMK*SRAVIS
Trigger: AGAGATCACTGCTCGACTGCACTTCATTAAGTTTGA...GAAGAGATCACTGCTCGACTGCACTTCATTAAGTTTGAGAATACCTACATCGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR GCA 90 bp CTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGGAATGAGACGTCTCCTAAATTaGTTTTTGAAGGAATGTGCT +
Preference number: 4 (lower is better)
Translates to: LHYLKRAETSPKLLFEGMRRLLN*FLKECA
Trigger: AGCACATTCCTTCAAAAAGCAATTTAGGAGACGTCT...CATTCCTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS GCA 90 bp CGGCTCTGGGCCGCCTCCCCCGTGCTGCTGCCTGCACCTACCTGCTaGGTCCGGAGGAGCCCCGACCACCGCCAGAGGCCCACAGCGGCG +
Preference number: 5 (lower is better)
Translates to: RLWAASPVLLPAPTC*VRRSPDHRQRPTAA
Trigger: CGCCGCTGTGGGCCTCTGGCGGTGGTCGGGGCTCCTCCGGACGCAGCAGGTAGGTGCAGGCAGCAGCACGGGGGAGGCGGCCCAGAGCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471361.1
ENST00000628707.1
CDS GCA 90 bp CAGTCGAAGACATTCCCCGCCAGGAGGCCTTTCACCAGCGCCAGCTaGCGTTCCTCCCAGCCCAGCGCGTCCAGGGAGCGCACGACCCCG +
Preference number: 5 (lower is better)
Translates to: QSKTFPARRPFTSAS*RSSQPSASRERTTP
Trigger: CGGGGTCGTGCGCTCCCTGGACGCGCTGGGCTGGGAGGAACGGCAGCTGGCGCTGGTGAAAGGCCTCCTGGCGGGGAATGTCTTCGACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000471361.1
ENST00000487804.1
ENST00000502512.1
ENST00000505228.5
ENST00000615291.3
ENST00000625442.1
ENST00000626423.2
ENST00000628707.1
ENST00000629615.1
ENST00000630982.2
CDS-3UTR CAA 90 bp GCGCCACGCTCCCGCACCAGTGCGGCCAGCCCCTTATCCAGGCGGCTGAGGTCGTTGATGACGGCCAGCTaGAGGCTCTCGCAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: APRSRTSAASPLSRRLRSLMTAS*RLSQRR
Trigger: CCTGCGCTGCGAGAGCCTCAAGCTGGCCGTCATCAA...CGACCTCAGCCGCCTGGATAAGGGGCTGGCCGCACTGGTGCGGGAGCGTGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS GCA 90 bp CACCTCCTTGCCCGCAAGCCTGGGGCAGGACAGGCACCCACAGGCTaGAGAGCCTGCTCCGAGCCCGCAGACACCTACGCAGACACGGCT +
Preference number: 5 (lower is better)
Translates to: HLLARKPGAGQAPTG*RACSEPADTYADTA
Trigger: AGCCGTGTCTGCGTAGGTGTCTGCGGGCTCGGAGCAGGCTCTGCAGCCTGTGGGTGCCTGTCCTGCCCCAGGCTTGCGGGCAAGGAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487804.1
ENST00000629615.1
CDS CCA 90 bp CTGCCTTCTTCCGCCACGTCTCTGGGCCACAGACGAGACCCCCACTaGGCCCCCTCAGCTGCCCGGCGGCCTGAGCCGGATACCTTGACT +
Preference number: 5 (lower is better)
Translates to: LPSSATSLGHRRDPH*APSAARRPEPDTLT
Trigger: AGTCAAGGTATCCGGCTCAGGCCGCCGGGCAGCTGAGGGGGCCCAGTGGGGGTCTCGTCTGTGGCCCAGAGACGTGGCGGAAGAAGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000515423.1
ENST00000629208.1
CDS TCA 90 bp GTCAAAAGTGCCACTCCGCGCCCGCTGCGCCGGGCCGAGCTCGGGTaGTGCACTCATCAGCCCGGAGCTGCCTGCATAGTTCTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: VKSATPRPLRRAELG*CTHQPGAACIVLSP
Trigger: TGGGGAGAGAACTATGCAGGCAGCTCCGGGCTGATGAGTGCATCACCCGAGCTCGGCCCGGCGCAGCGGGCGCGGAGTGGCACTTTTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000468002.2
ENST00000505228.5
ENST00000615291.3
ENST00000626423.2
ENST00000628406.1
ENST00000630982.2
CDS TCA 90 bp TTAAACCAGAGGCACGAGTTCCCAGGTCCCACGTCCACGGCCGCCTaGACTCACGCCCGGCGTCCACTCTCCAGAGAGCGGGGCCTGTGC +
Preference number: 5 (lower is better)
Translates to: LNQRHEFPGPTSTAA*THARRPLSRERGLC
Trigger: GCACAGGCCCCGCTCTCTGGAGAGTGGACGCCGGGCGTGAGTTCAGGCGGCCGTGGACGTGGGACCTGGGAACTCGTGCCTCTGGTTTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491212.1
ENST00000625859.1
CDS GCA 90 bp GGCCCGCCGTCATTACTGAGAGCACAGCCATCAGGCAGGAGGGTCTaGAGCGGACCCTGGAGAGGCCAGGGCAGAAGTGCAGGCCGCCTT +
Preference number: 5 (lower is better)
Translates to: GPPSLLRAQPSGRRV*SGPWRGQGRSAGRL
Trigger: AAGGCGGCCTGCACTTCTGCCCTGGCCTCTCCAGGGTCCGCTGCAGACCCTCCTGCCTGATGGCTGTGCTCTCAGTAATGACGGCGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491212.1
ENST00000625859.1
CDS CCA 90 bp TGCCGGAACTTCTCCGCCCTCTCGGCTGCATCCACAGAGTCTGGCTaGCTCGCCACTGCGCGCTTCACTACCCCGTCCAGGGCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: CRNFSALSAASTESG*LATARFTTPSRASS
Trigger: TGAGGAGGCCCTGGACGGGGTAGTGAAGCGCGCAGTGGCGAGCCAGCCAGACTCTGTGGATGCAGCCGAGAGGGCGGAGAAGTTCCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000505228.5
ENST00000615291.3
ENST00000626423.2
ENST00000630982.2
CDS CCA 90 bp CTTCTGCCGGAACTTCTCCGCCCTCTCGGCTGCATCCACAGAGTCTaGCTGGCTCGCCACTGCGCGCTTCACTACCCCGTCCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: LLPELLRPLGCIHRV*LARHCALHYPVQGL
Trigger: GAGGCCCTGGACGGGGTAGTGAAGCGCGCAGTGGCGAGCCAGCCAGACTCTGTGGATGCAGCCGAGAGGGCGGAGAAGTTCCGGCAGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000505228.5
ENST00000615291.3
ENST00000626423.2
ENST00000630982.2
CDS-3UTR CAA 90 bp GATGACGCTGAAGAGCCGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATGCCAGCCACGCGTTCTaGATGACGGCCAGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: DDAEEPAAQPLGQPRVLDASHAF*MTASLR
Trigger: CCTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGC...ATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCGGCTCTTCAGCGTCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp CCGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATGACGGCCAGCTTGAGTCATGGGGGATGTTCTaGAGCACGAAGTTGCACCCC +
Preference number: 5 (lower is better)
Translates to: PAAQPLGQPRVLDDGQLESWGMF*STKLHP
Trigger: GGGGTGCAACTTCGTGCTCAAGAACATCCCCCATGA...CTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGAGGGCGGGGCCTGAGTaGCACGCCAGGATGACCTCT +
Preference number: 5 (lower is better)
Translates to: SQDKAASRLWVTRICAAGRAGPE*HARMTS
Trigger: AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCT...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CTGTGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTAGGGCGGGGCCTGAGTaGCACGCCAGGATGACCTCT +
Preference number: 5 (lower is better)
Translates to: LWVTSFRAGPELHARMTSRAGPE*HARMTS
Trigger: AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCT...AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CAA 90 bp GCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTTTGATGACGGCCAGCTaGAGGCTCTCGCAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: ASRLWVTRICAAGVYVPRLMTAS*RLSQRR
Trigger: CCTGCGCTGCGAGAGCCTCAAGCTGGCCGTCATCAA...ACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTGCCAGCCACGCGTTCTaGATGACGGCCAGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: ASRLWVTRICAAGVYVPRASHAF*MTASLR
Trigger: CCTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGC...ACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CAGCAGCAGCCTCTCTTCCTGGAGCGCAGAGTGCACGACAGGGTCCATGCCCGCGCCAGCCACGCGTTCTaGATGACGGCCAGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: QQQPLFLERRVHDRVHARASHAF*MTASLR
Trigger: CCTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGC...GCGGGCATGGACCCTGTCGTGCACTCTGCGCTCCAGGAAGAGAGGCTGCTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp GCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTTTGGCGTTCTCCAGGTaGCGGAAGATCTCGTCGGGG +
Preference number: 5 (lower is better)
Translates to: ASRLWVTRICAAGVYVPRLAFSR*RKISSG
Trigger: CCCCGACGAGATCTTCCGCAACCTGGAGAACGCCAA...ACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GTCCTGGAAAACAGAGTAGGGGAGGCCGCATGTGTGTGGGACACCGCGCCGGGCTTGGCGTTCTCCAGGTaGCGGAAGATCTCGTCGGGG +
Preference number: 5 (lower is better)
Translates to: VLENRVGEAACVWDTAPGLAFSR*RKISSG
Trigger: CCCCGACGAGATCTTCCGCAACCTGGAGAACGCCAA...GCCCGGCGCGGTGTCCCACACACATGCGGCCTCCCCTACTCTGTTTTCCAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CAA 90 bp CAGCAGCAGCCTCTCTTCCTGGAGCGCAGAGTGCACGACAGGGTCCATGCCCGCACCAGCATGTCCACATaGCTGTGCTGGCCCCTCGAG +
Preference number: 5 (lower is better)
Translates to: QQQPLFLERRVHDRVHARTSMST*LCWPLE
Trigger: CTCGAGGGGCCAGCACAGCAATGTGGACATGCTGGT...GCGGGCATGGACCCTGTCGTGCACTCTGCGCTCCAGGAAGAGAGGCTGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp GACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTAGGGCGGGGCCTGAGTaGCACGCCAGGATGACCTCT +
Preference number: 5 (lower is better)
Translates to: DRVHARNTLCHDEGLAVGRAGPE*HARMTS
Trigger: AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCT...ACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CAA 90 bp TGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTGTCGGGCTGCGTGGTAGTTaGTGTGGACAGCACGGCCCA +
Preference number: 5 (lower is better)
Translates to: WVTSFRAGPELHARMTSVGLRGS*CGQHGP
Trigger: TGGGCCGTGCTGTCCACACAAACTACCACGCAGCCC...GACAGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp GTTTGTGTGGACAGCACGGCCCATGCCCTCGATGACCACCAGATCCGCGCCACGTTGATGACGGCCAGCTaGAGGCTCTCGCAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: VCVDSTAHALDDHQIRATLMTAS*RLSQRR
Trigger: CCTGCGCTGCGAGAGCCTCAAGCTGGCCGTCATCAA...CGTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCCGTGCTGTCCACACAAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGCCAGCCACGCGTTCTaGATGACGGCCAGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: ASGSHASVRLGCMCRVTAASHAF*MTASLR
Trigger: CCTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGC...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS GCA 90 bp TGGCCCCGGATAAAGAAGCCTCCAAAGTACACGCGGTCCAGGCTGTaGAGCCGTGCGTGGAGGCAGGCCAGCTGCCCAATGTCGTTGCTG +
Preference number: 5 (lower is better)
Translates to: WPRIKKPPKYTRSRL*SRAWRQASCPMSLL
Trigger: CAGCAACGACATTGGGCAGCTGGCCTGCCTCCACGCACGGCTGCACAGCCTGGACCGCGTGTACTTTGGAGGCTTCTTTATCCGGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000468002.2
ENST00000505228.5
ENST00000615291.3
ENST00000626423.2
ENST00000628406.1
ENST00000630982.2
CDS GCA 90 bp CCCTGGGACCTGCCTGTCTGTGAAGTCACAGCCCCAAAGCCTCCTTaGTGTGAGCACCCTTCCAGGAGCCTGGCGTCAACCCTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: PWDLPVCEVTAPKPP*CEHPSRSLASTLGF
Trigger: GAAGCCCAGGGTTGACGCCAGGCTCCTGGAAGGGTGCTCACAGCAAGGAGGCTTTGGGGCTGTGACTTCACAGACAGGCAGGTCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471361.1
ENST00000628707.1
CDS-3UTR CAA 90 bp GGCGCCGCCGTAGACGTCCCGCACCAGCATGTCCACATTGCTGTGCTGGCCCCTTCATGGGGGATGTTCTaGAGCACGAAGTTGCACCCC +
Preference number: 5 (lower is better)
Translates to: GAAVDVPHQHVHIAVLAPSWGMF*STKLHP
Trigger: GGGGTGCAACTTCGTGCTCAAGAACATCCCCCATGA...AGGGGCCAGCACAGCAATGTGGACATGCTGGTGCGGGACGTCTACGGCGGCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp CGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATGACGGCCAGCTTGAGGTCAAACTTCTTCGTTTaGGTGAGCAGAGCGCCAAGC +
Preference number: 5 (lower is better)
Translates to: RPPSRSASHAFLMTASLRSNFFV*VSRAPS
Trigger: GCTTGGCGCTCTGCTCACCAAAACGAAGAAGTTTGA...CCTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGACCAGCATGTCCACATaGCTGTGCTGGCCCCTCGAG +
Preference number: 5 (lower is better)
Translates to: SQDKAASRLWVTRICAAGTSMST*LCWPLE
Trigger: CTCGAGGGGCCAGCACAGCAATGTGGACATGCTGGT...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CACTCGGCTGGGACCTCGTACTTGAAGATGACGCTGAAGAGCCGGCCGCCCAGCACCAGCATGTCCACATaGCTGTGCTGGCCCCTCGAG +
Preference number: 5 (lower is better)
Translates to: HSAGTSYLKMTLKSRPPSTSMST*LCWPLE
Trigger: CTCGAGGGGCCAGCACAGCAATGTGGACATGCTGGT...GCTGGGCGGCCGGCTCTTCAGCGTCATCTTCAAGTACGAGGTCCCAGCCGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp GTGCCGCCTCCAATGGAGCTGCCGCCGACCCACTCGAACCTGTCCTCCGTCTCCTTCTTTGGAGAACTCTaGGTCGGCGGTGGCCGACTT +
Preference number: 5 (lower is better)
Translates to: VPPPMELPPTHSNLSSVSFFGEL*VGGGRL
Trigger: AAGTCGGCCACCGCCGACCAAGAGTTCTCCAAAGAA...GGAGACGGAGGACAGGTTCGAGTGGGTCGGCGGCAGCTCCATTGGAGGCGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp CGGCCGCCCAGCCGCTCGGCCAGCCACGCGTTCTTGATGACGGCCAGCTTGAGGCTGTACTGGTTAGGATaGTCCTGCTCAGCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: RPPSRSASHAFLMTASLRLYWLG*SCSAPF
Trigger: GAAAGGAGCTGAGCAGGACAATCCTAACCAGTACAG...CCTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGCCGAGCGGCTGGGCGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp TCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGGGGCTGCGTGGTAGTTaGTGTGGACAGCACGGCCCA +
Preference number: 5 (lower is better)
Translates to: SMPAIRSATMRDSLWVTSGLRGS*CGQHGP
Trigger: TGGGCCGTGCTGTCCACACAAACTACCACGCAGCCC...CGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS CCA 90 bp CAGGGCAGAAGTGCAGGCCGCCTTAAAGGCCACGGAAGGCACGGGTaGCTTTTAAACCAGAGGCACGAGTTCCCAGGTCCCACGTCCACG +
Preference number: 5 (lower is better)
Translates to: QGRSAGRLKGHGRHG*LLNQRHEFPGPTST
Trigger: CGTGGACGTGGGACCTGGGAACTCGTGCCTCTGGTTTAAAAGCCACCCGTGCCTTCCGTGGCCTTTAAGGCGGCCTGCACTTCTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491212.1
ENST00000625859.1
CDS-3UTR CAA 90 bp GAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCTCGATGGCGAAGCGCTaGGCGTTCTCCAGGTTGCGG +
Preference number: 5 (lower is better)
Translates to: ERLPGQSCVSPLGHTHLCSMAKR*AFSRLR
Trigger: CCGCAACCTGGAGAACGCCAAGCGCTTCGCCATCGA...GCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTTCGAAAGACCGCACCTaGGCGACTTTGTGCTGTACC +
Preference number: 5 (lower is better)
Translates to: ASRLWVTRICAAGVYVPRSKDRT*ATLCCT
Trigger: GGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCGA...ACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTCATCACGTCCTCCTaGTCGACTTTCAGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: SQDKAASRLWVTRICAAGVITSS*STFSRS
Trigger: GCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGAC...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378466.9
ENST00000615291.3
CDS-3UTR CAA 90 bp CAGCAGCAGCCTCTCTTCCTGGAGCGCAGAGTGCACGACAGGGTCCATGCCCGCGCTGGGACCTCGTACTaGAAGATGACGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: QQQPLFLERRVHDRVHARAGTSY*KMTLKS
Trigger: GCTCTTCAGCGTCATCTTCAAGTACGAGGTCCCAGC...GCGGGCATGGACCCTGTCGTGCACTCTGCGCTCCAGGAAGAGAGGCTGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS TCA 90 bp GCGTGGGAAAAAGGTCTAGAACAGAGCCTGGCCCGCCGTCATTACTaGGAGCACAGCCATCAGGCAGGAGGGTCTGCAGCGGACCCTGGA +
Preference number: 5 (lower is better)
Translates to: AWEKGLEQSLARRHY*EHSHQAGGSAADPG
Trigger: TCCAGGGTCCGCTGCAGACCCTCCTGCCTGATGGCTGTGCTCTCAGTAATGACGGCGGGCCAGGCTCTGTTCTAGACCTTTTTCCCACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491212.1
ENST00000625859.1
CDS-3UTR CAA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATAGGCAGCGTGATGCTCTaGTCCAGACTGTCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: VTRICAAGVYVPRHSSTIGSVML*SRLSPL
Trigger: CAGCGGGGACAGTCTGGACAAGAGCATCACGCTGCC...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CGAGGCCAGGTGCAGGAGCTCGTCAAACTTCTTCGTTTTGGTGAGCAGAGCGCCTCGATGGCGAAGCGCTaGGCGTTCTCCAGGTTGCGG +
Preference number: 5 (lower is better)
Translates to: RGQVQELVKLLRFGEQSASMAKR*AFSRLR
Trigger: CCGCAACCTGGAGAACGCCAAGCGCTTCGCCATCGA...GGCGCTCTGCTCACCAAAACGAAGAAGTTTGACGAGCTCCTGCACCTGGCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGTCATGGGGGATGTTCTaGAGCACGAAGTTGCACCCC +
Preference number: 5 (lower is better)
Translates to: SQDKAASRLWVTRICAAGSWGMF*STKLHP
Trigger: GGGGTGCAACTTCGTGCTCAAGAACATCCCCCATGA...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378466.9
ENST00000615291.3
CDS-3UTR CAA 90 bp CACTCGGCTGGGACCTCGTACTTGAAGATGACGCTGAAGAGCCGGCCGCCCAGCTCATGGGGGATGTTCTaGAGCACGAAGTTGCACCCC +
Preference number: 5 (lower is better)
Translates to: HSAGTSYLKMTLKSRPPSSWGMF*STKLHP
Trigger: GGGGTGCAACTTCGTGCTCAAGAACATCCCCCATGA...GCTGGGCGGCCGGCTCTTCAGCGTCATCTTCAAGTACGAGGTCCCAGCCGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp CGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCAAAATGTGGGGGTGGTaGGTCTGGAACCGGAACTCA +
Preference number: 5 (lower is better)
Translates to: RLASGSHASVRLGCMCRVKMWGW*VWNRNS
Trigger: TGAGTTCCGGTTCCAGACCAACCACCCCCACATTTT...GACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCACCAGCATGTCCACATaGCTGTGCTGGCCCCTCGAG +
Preference number: 5 (lower is better)
Translates to: ERLPGQSCVSPLGHTHLCTSMST*LCWPLE
Trigger: CTCGAGGGGCCAGCACAGCAATGTGGACATGCTGGT...GCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGTTCTTTGGAGAACTCTaGGTCGGCGGTGGCCGACTT +
Preference number: 5 (lower is better)
Translates to: SQDKAASRLWVTRICAAGFFGEL*VGGGRL
Trigger: AAGTCGGCCACCGCCGACCAAGAGTTCTCCAAAGAA...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CACTCGGCTGGGACCTCGTACTTGAAGATGACGCTGAAGAGCCGGCCGCCCAGCTTCTTTGGAGAACTCTaGGTCGGCGGTGGCCGACTT +
Preference number: 5 (lower is better)
Translates to: HSAGTSYLKMTLKSRPPSFFGEL*VGGGRL
Trigger: AAGTCGGCCACCGCCGACCAAGAGTTCTCCAAAGAA...GCTGGGCGGCCGGCTCTTCAGCGTCATCTTCAAGTACGAGGTCCCAGCCGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAAGCTGCCCAATGTCGTaGCTGATCATGTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: ASGSHASVRLGCMCRVTASCPMS*LIMCSR
Trigger: CCTGCTGCACATGATCAGCAACGACATTGGGCAGCT...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CTGTGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTAGCTGCCCAATGTCGTaGCTGATCATGTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LWVTSFRAGPELHARMTSSCPMS*LIMCSR
Trigger: CCTGCTGCACATGATCAGCAACGACATTGGGCAGCT...AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp CTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCTGGGACCTCGTACTaGAAGATGACGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: LASGSHASVRLGCMCRVTAGTSY*KMTLKS
Trigger: GCTCTTCAGCGTCATCTTCAAGTACGAGGTCCCAGC...TGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS GCA 90 bp AAGCTTGTTCCAGTACTTCTGCCGGAACTTCTCCGCCCTCTCGGCTaGATCCACAGAGTCTGGCTGGCTCGCCACTGCGCGCTTCACTAC +
Preference number: 5 (lower is better)
Translates to: KLVPVLLPELLRPLG*IHRVWLARHCALHY
Trigger: GTAGTGAAGCGCGCAGTGGCGAGCCAGCCAGACTCTGTGGATGCAGCCGAGAGGGCGGAGAAGTTCCGGCAGAAGTACTGGAACAAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000505228.5
ENST00000615291.3
ENST00000626423.2
ENST00000630982.2
CDS-3UTR CAA 90 bp GCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCCGCAGGGCAGCGTGATGCTCTaGTCCAGACTGTCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: APLNQARHHVLLVDFQPQGSVML*SRLSPL
Trigger: CAGCGGGGACAGTCTGGACAAGAGCATCACGCTGCC...CTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CAA 90 bp GCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCTTTGTGCTGTACCGTaGAATAGTAGGCCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: ASRLWVTRICAAGVYVPRLCAVP*NSRPAW
Trigger: CCAAGCTGGCCTACTATTCAACGGTACAGCACAAAG...ACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GGCCCCGCCCCCGGTCGCCTGGATGACCTTGGTCTCTGTGTTGACGAGATGGTCTTGACGAGATGGTCTTaGATGAAGTCCAGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: GPAPGRLDDLGLCVDEMVLTRWS*MKSRQA
Trigger: AGCCTGCCTGGACTTCATCAAAGACCATCTCGTCAA...GACCATCTCGTCAACACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CAA 90 bp GCTGGCTGTTCGCGCCAGCCTTCAACCAGGCGGCGCTCTGAGGCAGAATCCTGGTTCTTGAGCACGAAGTaGCACCCCTTAATCAGGCAC +
Preference number: 5 (lower is better)
Translates to: AGCSRQPSTRRRSEAESWFLSTK*HPLIRH
Trigger: GTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAGAA...CCAGGATTCTGCCTCAGAGCGCCGCCTGGTTGAAGGCTGGCGCGAACAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CAA 90 bp GCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTTTCTTGAGCACGAAGTaGCACCCCTTAATCAGGCAC +
Preference number: 5 (lower is better)
Translates to: ASRLWVTRICAAGVYVPRFLSTK*HPLIRH
Trigger: GTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAGAA...ACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378466.9
ENST00000615291.3
CDS-3UTR CAA 90 bp ACATTGCTGTGCTGGCCCCTCGAGGCCAGGTGCAGGAGCTCGTCAAACTTCTTCACCAGCATGTCCACATaGCTGTGCTGGCCCCTCGAG +
Preference number: 5 (lower is better)
Translates to: TLLCWPLEARCRSSSNFFTSMST*LCWPLE
Trigger: CTCGAGGGGCCAGCACAGCAATGTGGACATGCTGGT...GAAGAAGTTTGACGAGCTCCTGCACCTGGCCTCGAGGGGCCAGCACAGCAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp TCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGTTCGCCATGTCTTCTTaGGAGAACTCTTGGTCGGCG +
Preference number: 5 (lower is better)
Translates to: SQDKAASRLWVTRICAAGFAMSS*ENSWSA
Trigger: CGCCGACCAAGAGTTCTCCAAAGAAGACATGGCGAA...CCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GCCCCGCCCCCGGTCGCCTGGATGACCTTGGTCTCTGTGTTGACGAGATGGTCTTTCGCCATGTCTTCTTaGGAGAACTCTTGGTCGGCG +
Preference number: 5 (lower is better)
Translates to: APPPVAWMTLVSVLTRWSFAMSS*ENSWSA
Trigger: CGCCGACCAAGAGTTCTCCAAAGAAGACATGGCGAA...AGACCATCTCGTCAACACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp TGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTGTCTTCGCCATGTCTTCTTaGGAGAACTCTTGGTCGGCG +
Preference number: 5 (lower is better)
Translates to: WVTSFRAGPELHARMTSVFAMSS*ENSWSA
Trigger: CGCCGACCAAGAGTTCTCCAAAGAAGACATGGCGAA...GACAGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp TGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTGTCGCCTGCACTTCCCCCTaGGAGAAGAAGTTGATGCTA +
Preference number: 5 (lower is better)
Translates to: WVTSFRAGPELHARMTSVACTSP*EKKLML
Trigger: TAGCATCAACTTCTTCTCCAAGGGGGAAGTGCAGGC...GACAGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGCCTGCACTTCCCCCTaGGAGAAGAAGTTGATGCTA +
Preference number: 5 (lower is better)
Translates to: ASGSHASVRLGCMCRVTAACTSP*EKKLML
Trigger: TAGCATCAACTTCTTCTCCAAGGGGGAAGTGCAGGC...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCCTGTACTGGTTAGGATaGTCCTGCTCAGCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: RLASGSHASVRLGCMCRVLYWLG*SCSAPF
Trigger: GAAAGGAGCTGAGCAGGACAATCCTAACCAGTACAG...GACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTTTGATGACGGCCAGCTaGAGGCTCTCGCAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: MNVSQDKAASRLWVTRICLMTAS*RLSQRR
Trigger: CCTGCGCTGCGAGAGCCTCAAGCTGGCCGTCATCAA...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CGGCCTCTTTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGGCAGCGTGATGCTCTaGTCCAGACTGTCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: RPLLKTLFGACPRCCVPSGSVML*SRLSPL
Trigger: CAGCGGGGACAGTCTGGACAAGAGCATCACGCTGCC...TGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAAAGAGGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615291.3
CDS-3UTR CAA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTTTGGCGTTCTCCAGGTaGCGGAAGATCTCGTCGGGG +
Preference number: 5 (lower is better)
Translates to: MNVSQDKAASRLWVTRICLAFSR*RKISSG
Trigger: CCCCGACGAGATCTTCCGCAACCTGGAGAACGCCAA...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp TCGTCAAACTTCTTCGTTTTGGTGAGCAGAGCGCCAAGCCCCCAGAAGGTGCCGTTGGCGTTCTCCAGGTaGCGGAAGATCTCGTCGGGG +
Preference number: 5 (lower is better)
Translates to: SSNFFVLVSRAPSPQKVPLAFSR*RKISSG
Trigger: CCCCGACGAGATCTTCCGCAACCTGGAGAACGCCAA...CGGCACCTTCTGGGGGCTTGGCGCTCTGCTCACCAAAACGAAGAAGTTTGACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATTCGATGGCGAAGCGCTaGGCGTTCTCCAGGTTGCGG +
Preference number: 5 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYSMAKR*AFSRLR
Trigger: CCGCAACCTGGAGAACGCCAAGCGCTTCGCCATCGA...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GTCTTTGAACTTGTAGGCCCCGCCCCCGGTCGCCTGGATGACCTTGGTCTCTGTTCGAAAGACCGCACCTaGGCGACTTTGTGCTGTACC +
Preference number: 5 (lower is better)
Translates to: VFELVGPAPGRLDDLGLCSKDRT*ATLCCT
Trigger: GGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCGA...ACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGGGGCCTACAAGTTCAAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CAA 90 bp CAGCATGTCCACATTGCTGTGCTGGCCCCTCGAGGCCAGGTGCAGGAGCTCGTCTTGACGAGATGGTCTTaGATGAAGTCCAGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: QHVHIAVLAPRGQVQELVLTRWS*MKSRQA
Trigger: AGCCTGCCTGGACTTCATCAAAGACCATCTCGTCAA...GACGAGCTCCTGCACCTGGCCTCGAGGGGCCAGCACAGCAATGTGGACATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp CCGCCCCCGGTCGCCTGGATGACCTTGGTCTCTGTGTTGACGAGATGGTCTTTGGTCGCCTGGATGACCTaGGTCTCTGTGTTGACGAGA +
Preference number: 5 (lower is better)
Translates to: PPPVAWMTLVSVLTRWSLVAWMT*VSVLTR
Trigger: TCTCGTCAACACAGAGACCAAGGTCATCCAGGCGAC...CAAAGACCATCTCGTCAACACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CAA 90 bp ACATTGCTGTGCTGGCCCCTCGAGGCCAGGTGCAGGAGCTCGTCAAACTTCTTCGTCATCACGTCCTCCTaGTCGACTTTCAGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: TLLCWPLEARCRSSSNFFVITSS*STFSRS
Trigger: GCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGAC...GAAGAAGTTTGACGAGCTCCTGCACCTGGCCTCGAGGGGCCAGCACAGCAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp GTTTGTGTGGACAGCACGGCCCATGCCCTCGATGACCACCAGATCCGCGCCACGTTCTTGAGCACGAAGTaGCACCCCTTAATCAGGCAC +
Preference number: 5 (lower is better)
Translates to: VCVDSTAHALDDHQIRATFLSTK*HPLIRH
Trigger: GTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAGAA...CGTGGCGCGGATCTGGTGGTCATCGAGGGCATGGGCCGTGCTGTCCACACAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp AAGAAGCCTCCAAAGTACACGCGGTCCAGGCTGTGCAGCCGTGCGTGGAGGCAGAAAATGTGGGGGTGGTaGGTCTGGAACCGGAACTCA +
Preference number: 5 (lower is better)
Translates to: KKPPKYTRSRLCSRAWRQKMWGW*VWNRNS
Trigger: TGAGTTCCGGTTCCAGACCAACCACCCCCACATTTT...CTGCCTCCACGCACGGCTGCACAGCCTGGACCGCGTGTACTTTGGAGGCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp AATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCAGGGCGGGAAAATGTGGGGGTGGTaGGTCTGGAACCGGAACTCA +
Preference number: 5 (lower is better)
Translates to: NTLCHDEGLAVGHVVQGGKMWGW*VWNRNS
Trigger: TGAGTTCCGGTTCCAGACCAACCACCCCCACATTTT...CCCGCCCTGAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp ATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCTTCTTTGGAGAACTCTaGGTCGGCGGTGGCCGACTT +
Preference number: 5 (lower is better)
Translates to: MPAIRSATMRDSLWVTSFFFGEL*VGGGRL
Trigger: AAGTCGGCCACCGCCGACCAAGAGTTCTCCAAAGAA...GAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp GATGAGGTCTTTGAACTTGTAGGCCCCGCCCCCGGTCGCCTGGATGACCTTGGTTTCTTTGGAGAACTCTaGGTCGGCGGTGGCCGACTT +
Preference number: 5 (lower is better)
Translates to: DEVFELVGPAPGRLDDLGFFGEL*VGGGRL
Trigger: AAGTCGGCCACCGCCGACCAAGAGTTCTCCAAAGAA...ACCAAGGTCATCCAGGCGACCGGGGGCGGGGCCTACAAGTTCAAAGACCTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp GAGTGCACGACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGTTCGCCATGTCTTCTTaGGAGAACTCTTGGTCGGCG +
Preference number: 5 (lower is better)
Translates to: ECTTGSMPAIRSATMRDSFAMSS*ENSWSA
Trigger: CGCCGACCAAGAGTTCTCCAAAGAAGACATGGCGAA...CGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp ATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCAGCTGCCCAATGTCGTaGCTGATCATGTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: MPAIRSATMRDSLWVTSFSCPMS*LIMCSR
Trigger: CCTGCTGCACATGATCAGCAACGACATTGGGCAGCT...GAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp GAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCAGCTGCCCAATGTCGTaGCTGATCATGTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: ERLPGQSCVSPLGHTHLCSCPMS*LIMCSR
Trigger: CCTGCTGCACATGATCAGCAACGACATTGGGCAGCT...GCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp TCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGGCCTGCACTTCCCCCTaGGAGAAGAAGTTGATGCTA +
Preference number: 5 (lower is better)
Translates to: SMPAIRSATMRDSLWVTSACTSP*EKKLML
Trigger: TAGCATCAACTTCTTCTCCAAGGGGGAAGTGCAGGC...CGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp CAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATGGGCTGCGTGGTAGTTaGTGTGGACAGCACGGCCCA +
Preference number: 5 (lower is better)
Translates to: QYERLPGQSCVSPLGHTHGLRGS*CGQHGP
Trigger: TGGGCCGTGCTGTCCACACAAACTACCACGCAGCCC...ATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATTTGATGACGGCCAGCTaGAGGCTCTCGCAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: QYERLPGQSCVSPLGHTHLMTAS*RLSQRR
Trigger: CCTGCGCTGCGAGAGCCTCAAGCTGGCCGTCATCAA...ATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GGCAGCTGCAGCGCCTCACTCGGCTGGGACCTCGTACTTGAAGATGACGCTGAAGCTGGGACCTCGTACTaGAAGATGACGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: GSCSASLGWDLVLEDDAEAGTSY*KMTLKS
Trigger: GCTCTTCAGCGTCATCTTCAAGTACGAGGTCCCAGC...TTCAGCGTCATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGCGCTGCAGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATTCGATGGCGAAGCGCTaGGCGTTCTCCAGGTTGCGG +
Preference number: 5 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDSMAKR*AFSRLR
Trigger: CCGCAACCTGGAGAACGCCAAGCGCTTCGCCATCGA...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAACCTTGGTCTCTGTGTaGACGAGATGGTCTTTGATG +
Preference number: 5 (lower is better)
Translates to: ASGSHASVRLGCMCRVTATLVSV*TRWSLM
Trigger: CATCAAAGACCATCTCGTCAACACAGAGACCAAGGT...TGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp ACGACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGTCAAACTTCTTCGTTTaGGTGAGCAGAGCGCCAAGC +
Preference number: 5 (lower is better)
Translates to: TTGSMPAIRSATMRDSLWSNFFV*VSRAPS
Trigger: GCTTGGCGCTCTGCTCACCAAAACGAAGAAGTTTGA...CCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp CACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAAACCAGCATGTCCACATaGCTGTGCTGGCCCCTCGAG +
Preference number: 5 (lower is better)
Translates to: HASVRLGCMCRVTAVPYKTSMST*LCWPLE
Trigger: CTCGAGGGGCCAGCACAGCAATGTGGACATGCTGGT...TTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GAGCACGAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACACCAGCATGTCCACATaGCTGTGCTGGCCCCTCGAG +
Preference number: 5 (lower is better)
Translates to: EHEVAPLNQARHHVLLVDTSMST*LCWPLE
Trigger: CTCGAGGGGCCAGCACAGCAATGTGGACATGCTGGT...GTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp TTCGATGAGGTCTTTGAACTTGTAGGCCCCGCCCCCGGTCGCCTGGATGACCTTAGCTGCCCAATGTCGTaGCTGATCATGTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: FDEVFELVGPAPGRLDDLSCPMS*LIMCSR
Trigger: CCTGCTGCACATGATCAGCAACGACATTGGGCAGCT...AAGGTCATCCAGGCGACCGGGGGCGGGGCCTACAAGTTCAAAGACCTCATCGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp AATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCAGGGCGGGCTGTACTGGTTAGGATaGTCCTGCTCAGCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: NTLCHDEGLAVGHVVQGGLYWLG*SCSAPF
Trigger: GAAAGGAGCTGAGCAGGACAATCCTAACCAGTACAG...CCCGCCCTGAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATGCCAGCCACGCGTTCTaGATGACGGCCAGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDASHAF*MTASLR
Trigger: CCTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGC...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATAGCTGGGACCTCGTACTaGAAGATGACGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: VTRICAAGVYVPRHSSTIAGTSY*KMTLKS
Trigger: GCTCTTCAGCGTCATCTTCAAGTACGAGGTCCCAGC...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS GCA 90 bp CCACACTCAGAAGCTTCCACTCTCTCTCTAAGAAGGGAGATGTACTaGCTTCTTCCGCCACGTCTCTGGGCCACAGACGAGACCCCCACT +
Preference number: 5 (lower is better)
Translates to: PHSEASTLSLRREMY*LLPPRLWATDETPT
Trigger: AGTGGGGGTCTCGTCTGTGGCCCAGAGACGTGGCGGAAGAAGGCAGTACATCTCCCTTCTTAGAGAGAGAGTGGAAGCTTCTGAGTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515423.1
ENST00000629208.1
CDS CCA 90 bp GCACCTTGGCGACTTTGTGCTGTACCGTTGAATAGTAGGCCAGCTTaGTTAACGACCCGCCTGCAGGGGAGACACAAACCGGGCAGGATT +
Preference number: 5 (lower is better)
Translates to: APWRLCAVPLNSRPA*LTTRLQGRHKPGRI
Trigger: AATCCTGCCCGGTTTGTGTCTCCCCTGCAGGCGGGTCGTTAACCAAGCTGGCCTACTATTCAACGGTACAGCACAAAGTCGCCAAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS CCA 90 bp CTCCAGCCGGTCCATTTCCAGCAAGTCAAACTGGAAGACAGGCAGTaGCAGGGTGGAAACGTCACCATGGTTCAGAACGACCCAAGCCAC +
Preference number: 5 (lower is better)
Translates to: LQPVHFQQVKLEDRQ*QGGNVTMVQNDPSH
Trigger: GTGGCTTGGGTCGTTCTGAACCATGGTGACGTTTCCACCCTGCCACTGCCTGTCTTCCAGTTTGACTTGCTGGAAATGGACCGGCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515423.1
ENST00000629208.1
CDS-3UTR CAA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCGGCAGCGTGATGCTCTaGTCCAGACTGTCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTGSVML*SRLSPL
Trigger: CAGCGGGGACAGTCTGGACAAGAGCATCACGCTGCC...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATTTGGCGTTCTCCAGGTaGCGGAAGATCTCGTCGGGG +
Preference number: 5 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDLAFSR*RKISSG
Trigger: CCCCGACGAGATCTTCCGCAACCTGGAGAACGCCAA...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CACGTCCTCCTTGTCGACTTTCAGCCGCAGCTTCTCTTCGATGAGGTCTTTGAATCGATGGCGAAGCGCTaGGCGTTCTCCAGGTTGCGG +
Preference number: 5 (lower is better)
Translates to: HVLLVDFQPQLLFDEVFESMAKR*AFSRLR
Trigger: CCGCAACCTGGAGAACGCCAAGCGCTTCGCCATCGA...TTCAAAGACCTCATCGAAGAGAAGCTGCGGCTGAAAGTCGACAAGGAGGACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CAA 90 bp GATGAGGTCTTTGAACTTGTAGGCCCCGCCCCCGGTCGCCTGGATGACCTTGGTTTGACGAGATGGTCTTaGATGAAGTCCAGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: DEVFELVGPAPGRLDDLGLTRWS*MKSRQA
Trigger: AGCCTGCCTGGACTTCATCAAAGACCATCTCGTCAA...ACCAAGGTCATCCAGGCGACCGGGGGCGGGGCCTACAAGTTCAAAGACCTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CAA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGTCGCCTGGATGACCTaGGTCTCTGTGTTGACGAGA +
Preference number: 5 (lower is better)
Translates to: MNVSQDKAASRLWVTRICVAWMT*VSVLTR
Trigger: TCTCGTCAACACAGAGACCAAGGTCATCCAGGCGAC...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp ATAGGGCGGCTCATGTTCACGTTCTGTGTCCTGGAAAACAGAGTAGGGGAGGCCGTCATCACGTCCTCCTaGTCGACTTTCAGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: IGRLMFTFCVLENRVGEAVITSS*STFSRS
Trigger: GCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGAC...GGCCTCCCCTACTCTGTTTTCCAGGACACAGAACGTGAACATGAGCCGCCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CAA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATGTCATCACGTCCTCCTaGTCGACTTTCAGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYVITSS*STFSRS
Trigger: GCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGAC...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378466.9
ENST00000615291.3
CDS-3UTR CAA 90 bp GGCAGCTGCAGCGCCTCACTCGGCTGGGACCTCGTACTTGAAGATGACGCTGAATTCTTGAGCACGAAGTaGCACCCCTTAATCAGGCAC +
Preference number: 5 (lower is better)
Translates to: GSCSASLGWDLVLEDDAEFLSTK*HPLIRH
Trigger: GTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAGAA...TTCAGCGTCATCTTCAAGTACGAGGTCCCAGCCGAGTGAGGCGCTGCAGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505228.5
ENST00000626423.2
CDS-3UTR CAA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATACCAGCATGTCCACATaGCTGTGCTGGCCCCTCGAG +
Preference number: 5 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDTSMST*LCWPLE
Trigger: CTCGAGGGGCCAGCACAGCAATGTGGACATGCTGGT...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTTTCTTTGGAGAACTCTaGGTCGGCGGTGGCCGACTT +
Preference number: 5 (lower is better)
Translates to: MNVSQDKAASRLWVTRICFFGEL*VGGGRL
Trigger: AAGTCGGCCACCGCCGACCAAGAGTTCTCCAAAGAA...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp TTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTTTGATGACGGCCAGCTaGAGGCTCTCGCAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: LKTLFGACPRCCVPSDIPLMTAS*RLSQRR
Trigger: CCTGCGCTGCGAGAGCCTCAAGCTGGCCGTCATCAA...AGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp TTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGCCAGCCACGCGTTCTaGATGACGGCCAGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: LKTLFGACPRCCVPSDIPASHAF*MTASLR
Trigger: CCTCAAGCTGGCCGTCATCAAGAACGCGTGGCTGGC...AGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CACGTCCTCCTTGTCGACTTTCAGCCGCAGCTTCTCTTCGATGAGGTCTTTGAATTGGCGTTCTCCAGGTaGCGGAAGATCTCGTCGGGG +
Preference number: 5 (lower is better)
Translates to: HVLLVDFQPQLLFDEVFELAFSR*RKISSG
Trigger: CCCCGACGAGATCTTCCGCAACCTGGAGAACGCCAA...TTCAAAGACCTCATCGAAGAGAAGCTGCGGCTGAAAGTCGACAAGGAGGACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CAA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTTGGCGTTCTCCAGGTaGCGGAAGATCTCGTCGGGG +
Preference number: 5 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTLAFSR*RKISSG
Trigger: CCCCGACGAGATCTTCCGCAACCTGGAGAACGCCAA...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CTCCGTCTCCACCTTCACGATGGAGACTCCAGAGCCGATATTGACAAGAAGATATCGATGGCGAAGCGCTaGGCGTTCTCCAGGTTGCGG +
Preference number: 5 (lower is better)
Translates to: LRLHLHDGDSRADIDKKISMAKR*AFSRLR
Trigger: CCGCAACCTGGAGAACGCCAAGCGCTTCGCCATCGA...TATCTTCTTGTCAATATCGGCTCTGGAGTCTCCATCGTGAAGGTGGAGACGGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp GTCCTCCTTGTCGACTTTCAGCCGCAGCTTCTCTTCGATGAGGTCTTTGAACTTTCGATGGCGAAGCGCTaGGCGTTCTCCAGGTTGCGG +
Preference number: 5 (lower is better)
Translates to: VLLVDFQPQLLFDEVFELSMAKR*AFSRLR
Trigger: CCGCAACCTGGAGAACGCCAAGCGCTTCGCCATCGA...AAGTTCAAAGACCTCATCGAAGAGAAGCTGCGGCTGAAAGTCGACAAGGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CAA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATTCGAAAGACCGCACCTaGGCGACTTTGTGCTGTACC +
Preference number: 5 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYSKDRT*ATLCCT
Trigger: GGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCGA...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GTGCTGGCCCCTCGAGGCCAGGTGCAGGAGCTCGTCAAACTTCTTCGTTTTGGTTTGACGAGATGGTCTTaGATGAAGTCCAGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: VLAPRGQVQELVKLLRFGLTRWS*MKSRQA
Trigger: AGCCTGCCTGGACTTCATCAAAGACCATCTCGTCAA...ACCAAAACGAAGAAGTTTGACGAGCTCCTGCACCTGGCCTCGAGGGGCCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp CAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATGTCGCCTGGATGACCTaGGTCTCTGTGTTGACGAGA +
Preference number: 5 (lower is better)
Translates to: QYERLPGQSCVSPLGHTHVAWMT*VSVLTR
Trigger: TCTCGTCAACACAGAGACCAAGGTCATCCAGGCGAC...ATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CTCATAGGGCGGCTCATGTTCACGTTCTGTGTCCTGGAAAACAGAGTAGGGGAGGTCATCACGTCCTCCTaGTCGACTTTCAGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: LIGRLMFTFCVLENRVGEVITSS*STFSRS
Trigger: GCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGAC...CTCCCCTACTCTGTTTTCCAGGACACAGAACGTGAACATGAGCCGCCCTATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CAA 90 bp GTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATTCTTGAGCACGAAGTaGCACCCCTTAATCAGGCAC +
Preference number: 5 (lower is better)
Translates to: VTRICAAGVYVPRHSSTIFLSTK*HPLIRH
Trigger: GTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAGAA...TATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378466.9
ENST00000615291.3
CDS-3UTR CAA 90 bp GCCATGTCTTCTTTGGAGAACTCTTGGTCGGCGGTGGCCGACTTCCCGAAGCTGTCAAACTTCTTCGTTTaGGTGAGCAGAGCGCCAAGC +
Preference number: 5 (lower is better)
Translates to: AMSSLENSWSAVADFPKLSNFFV*VSRAPS
Trigger: GCTTGGCGCTCTGCTCACCAAAACGAAGAAGTTTGA...CAGCTTCGGGAAGTCGGCCACCGCCGACCAAGAGTTCTCCAAAGAAGACATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp GGCCAGCTGCCCAATGTCGTTGCTGATCATGTGCAGCAGGCTCTTCGCCATGTCTCAAACTTCTTCGTTTaGGTGAGCAGAGCGCCAAGC +
Preference number: 5 (lower is better)
Translates to: GQLPNVVADHVQQALRHVSNFFV*VSRAPS
Trigger: GCTTGGCGCTCTGCTCACCAAAACGAAGAAGTTTGA...GACATGGCGAAGAGCCTGCTGCACATGATCAGCAACGACATTGGGCAGCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCCTGCACTTCCCCCTaGGAGAAGAAGTTGATGCTA +
Preference number: 5 (lower is better)
Translates to: MNVSQDKAASRLWVTRICACTSP*EKKLML
Trigger: TAGCATCAACTTCTTCTCCAAGGGGGAAGTGCAGGC...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GCGTCTCGCCTCTGGGTCACACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCTTGTAACTTCCTCTTaGCTTCTTCAAACCCAAAGT +
Preference number: 5 (lower is better)
Translates to: ASRLWVTRICAAGVYVPRLVTSS*LLQTQS
Trigger: ACTTTGGGTTTGAAGAAGCAAAGAGGAAGTTACAAG...ACGCGGCACATACACCCCAGCCGCACAGATGCGTGTGACCCAGAGGCGAGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCTTTTCCTACAAAGGGTCTaGAAGGGACACGGCGGAAGG +
Preference number: 5 (lower is better)
Translates to: PLNQARHHVLLVDFQPQLFLQRV*KGHGGR
Trigger: CCTTCCGCCGTGTCCCTTCAAGACCCTTTGTAGGAA...AAGCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS CCA 90 bp GCACCTTGGCGACTTTGTGCTGTACCGTTGAATAGTAGGCCAGCTTaGTTAACGACCCGCCTTTCTGGGGCTTGGTATCCTCATCTGCGA +
Preference number: 5 (lower is better)
Translates to: APWRLCAVPLNSRPA*LTTRLSGAWYPHLR
Trigger: TCGCAGATGAGGATACCAAGCCCCAGAAAGGCGGGTCGTTAACCAAGCTGGCCTACTATTCAACGGTACAGCACAAAGTCGCCAAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491212.1
ENST00000625859.1
CDS CCA 90 bp CACAGTGCAGGCTCACCTTTCCGGAGTGGTCGAAAGACCGCACCTTaGCGACTTTGTGCTGTACCGTTGAATAGTAGGCCAGCTTGGTTA +
Preference number: 5 (lower is better)
Translates to: HSAGSPFRSGRKTAP*RLCAVPLNSRPAWL
Trigger: TAACCAAGCTGGCCTACTATTCAACGGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCGACCACTCCGGAAAGGTGAGCCTGCACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502770.2
ENST00000514922.1
ENST00000628687.1
ENST00000629645.1
CDS-3UTR CAA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATGTCGCCTGGATGACCTaGGTCTCTGTGTTGACGAGA +
Preference number: 5 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDVAWMT*VSVLTR
Trigger: TCTCGTCAACACAGAGACCAAGGTCATCCAGGCGAC...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GGGGATGTTCTTGAGCACGAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCGTCGCCTGGATGACCTaGGTCTCTGTGTTGACGAGA +
Preference number: 5 (lower is better)
Translates to: GDVLEHEVAPLNQARHHVVAWMT*VSVLTR
Trigger: TCTCGTCAACACAGAGACCAAGGTCATCCAGGCGAC...GACGTGATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAGAACATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CAA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGGTCGCCTGGATGACCTaGGTCTCTGTGTTGACGAGA +
Preference number: 5 (lower is better)
Translates to: LCGWGVCAASQQYHINTLVAWMT*VSVLTR
Trigger: TCTCGTCAACACAGAGACCAAGGTCATCCAGGCGAC...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp TTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCTTCTCTGTCATCACGTCCTCCTaGTCGACTTTCAGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: LIRHVITSSLSTFSRSFSVITSS*STFSRS
Trigger: GCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGAC...AGAGAAGCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CAA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATAAAATGTGGGGGTGGTaGGTCTGGAACCGGAACTCA +
Preference number: 5 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYKMWGW*VWNRNS
Trigger: TGAGTTCCGGTTCCAGACCAACCACCCCCACATTTT...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp ATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTTCAAACTTCTTCGTTTaGGTGAGCAGAGCGCCAAGC +
Preference number: 5 (lower is better)
Translates to: MNVSQDKAASRLWVTRICSNFFV*VSRAPS
Trigger: GCTTGGCGCTCTGCTCACCAAAACGAAGAAGTTTGA...ACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CCTCTTTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACTTCTTTGGAGAACTCTaGGTCGGCGGTGGCCGACTT +
Preference number: 5 (lower is better)
Translates to: PLLKTLFGACPRCCVPSDFFGEL*VGGGRL
Trigger: AAGTCGGCCACCGCCGACCAAGAGTTCTCCAAAGAA...GTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAAAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615291.3
CDS-3UTR CAA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATGCCTGCACTTCCCCCTaGGAGAAGAAGTTGATGCTA +
Preference number: 5 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYACTSP*EKKLML
Trigger: TAGCATCAACTTCTTCTCCAAGGGGGAAGTGCAGGC...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CTGTGGGTCACGTCGTTCAGGGCGGGGCCTGAGTTGCACGCCAGGATGACCTCTCTTGTAACTTCCTCTTaGCTTCTTCAAACCCAAAGT +
Preference number: 5 (lower is better)
Translates to: LWVTSFRAGPELHARMTSLVTSS*LLQTQS
Trigger: ACTTTGGGTTTGAAGAAGCAAAGAGGAAGTTACAAG...AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCTGAACGACGTGACCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CAA 90 bp AGCCCAGGAGGGAGAGAACAGGTGCAGGGTGCGGGGTTACCTGAGGTCGAGGCACTTGTAACTTCCTCTTaGCTTCTTCAAACCCAAAGT +
Preference number: 5 (lower is better)
Translates to: SPGGREQVQGAGLPEVEALVTSS*LLQTQS
Trigger: ACTTTGGGTTTGAAGAAGCAAAGAGGAAGTTACAAG...TGCCTCGACCTCAGGTAACCCCGCACCCTGCACCTGTTCTCTCCCTCCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502512.1
ENST00000625442.1
CDS-3UTR CAA 90 bp TTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGAGGGCGGGGCCTGAGTaGCACGCCAGGATGACCTCT +
Preference number: 5 (lower is better)
Translates to: FPCGGKNTFLTSDKQKSPRAGPE*HARMTS
Trigger: AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCT...CGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp ACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGGGCGGGGCCTGAGTaGCACGCCAGGATGACCTCT +
Preference number: 5 (lower is better)
Translates to: TQFPCGGKNTFLTSDKQKRAGPE*HARMTS
Trigger: AGAGGTCATCCTGGCGTGCAACTCAGGCCCCGCCCT...CTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGGCTGGGACCTCGTACTaGAAGATGACGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: LCGWGVCAASQQYHINTLAGTSY*KMTLKS
Trigger: GCTCTTCAGCGTCATCTTCAAGTACGAGGTCCCAGC...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS CCA 90 bp AAGTCAAACTGGAAGACAGGCAGTGGCAGGGTGGAAACGTCACCATaGTTCAGAACGACCCAAGCCACACTCAGAAGCTTCCACTCTCTC +
Preference number: 5 (lower is better)
Translates to: KSNWKTGSGRVETSP*FRTTQATLRSFHSL
Trigger: GAGAGAGTGGAAGCTTCTGAGTGTGGCTTGGGTCGTTCTGAACCATGGTGACGTTTCCACCCTGCCACTGCCTGTCTTCCAGTTTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515423.1
ENST00000629208.1
CDS CCA 90 bp GGTCCATTTCCAGCAAGTCAAACTGGAAGACAGGCAGTGGCAGGGTaGAAACGTCACCATGGTTCAGAACGACCCAAGCCACACTCAGAA +
Preference number: 5 (lower is better)
Translates to: GPFPASQTGRQAVAG*KRHHGSERPKPHSE
Trigger: TTCTGAGTGTGGCTTGGGTCGTTCTGAACCATGGTGACGTTTCCACCCTGCCACTGCCTGTCTTCCAGTTTGACTTGCTGGAAATGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515423.1
ENST00000629208.1
CDS-3UTR CAA 90 bp CAGGCAGGCTTCGATGTAGGTATTCTCAAACTTAATGAAGTGCAGTCGAGCAGTGGCAGCGTGATGCTCTaGTCCAGACTGTCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: QAGFDVGILKLNEVQSSSGSVML*SRLSPL
Trigger: CAGCGGGGACAGTCTGGACAAGAGCATCACGCTGCC...ACTGCTCGACTGCACTTCATTAAGTTTGAGAATACCTACATCGAAGCCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CAA 90 bp CAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTTTGTGCTGTACCGTaGAATAGTAGGCCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: QYERLPGQSCVSPLGHTHLCAVP*NSRPAW
Trigger: CCAAGCTGGCCTACTATTCAACGGTACAGCACAAAG...ATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATTTGACGAGATGGTCTTaGATGAAGTCCAGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYLTRWS*MKSRQA
Trigger: AGCCTGCCTGGACTTCATCAAAGACCATCTCGTCAA...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp TCGTCAAACTTCTTCGTTTTGGTGAGCAGAGCGCCAAGCCCCCAGAAGGTGCCGACCTTGGTCTCTGTGTaGACGAGATGGTCTTTGATG +
Preference number: 5 (lower is better)
Translates to: SSNFFVLVSRAPSPQKVPTLVSV*TRWSLM
Trigger: CATCAAAGACCATCTCGTCAACACAGAGACCAAGGT...CGGCACCTTCTGGGGGCTTGGCGCTCTGCTCACCAAAACGAAGAAGTTTGACGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp CACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCACCTTGGTCTCTGTGTaGACGAGATGGTCTTTGATG +
Preference number: 5 (lower is better)
Translates to: HPLIRHVITSSLSTFSRSTLVSV*TRWSLM
Trigger: CATCAAAGACCATCTCGTCAACACAGAGACCAAGGT...GCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CAA 90 bp GAGCACGAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCCTCCTTGTCGACTTCTTGAGCACGAAGTaGCACCCCTTAATCAGGCAC +
Preference number: 5 (lower is better)
Translates to: EHEVAPLNQARHHVLLVDFLSTK*HPLIRH
Trigger: GTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAGAA...GTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CAA 90 bp TATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTAAAATGTGGGGGTGGTaGGTCTGGAACCGGAACTCA +
Preference number: 5 (lower is better)
Translates to: YLVRAHGAASRQTYLYRSKMWGW*VWNRNS
Trigger: TGAGTTCCGGTTCCAGACCAACCACCCCCACATTTT...AGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATTCAAACTTCTTCGTTTaGGTGAGCAGAGCGCCAAGC +
Preference number: 5 (lower is better)
Translates to: QYERLPGQSCVSPLGHTHSNFFV*VSRAPS
Trigger: GCTTGGCGCTCTGCTCACCAAAACGAAGAAGTTTGA...ATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp TATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTTTCGCCATGTCTTCTTaGGAGAACTCTTGGTCGGCG +
Preference number: 5 (lower is better)
Translates to: YLVRAHGAASRQTYLYRSFAMSS*ENSWSA
Trigger: CGCCGACCAAGAGTTCTCCAAAGAAGACATGGCGAA...AGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp TTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTAGCTGCCCAATGTCGTaGCTGATCATGTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LKTLFGACPRCCVPSDIPSCPMS*LIMCSR
Trigger: CCTGCTGCACATGATCAGCAACGACATTGGGCAGCT...AGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATCTGTACTGGTTAGGATaGTCCTGCTCAGCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYLYWLG*SCSAPF
Trigger: GAAAGGAGCTGAGCAGGACAATCCTAACCAGTACAG...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GAGTGCACGACAGGGTCCATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTTGTAACTTCCTCTTaGCTTCTTCAAACCCAAAGT +
Preference number: 5 (lower is better)
Translates to: ECTTGSMPAIRSATMRDSLVTSS*LLQTQS
Trigger: ACTTTGGGTTTGAAGAAGCAAAGAGGAAGTTACAAG...CGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCATGGACCCTGTCGTGCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CAA 90 bp TTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGGGCTGCGTGGTAGTTaGTGTGGACAGCACGGCCCA +
Preference number: 5 (lower is better)
Translates to: FPCGGKNTFLTSDKQKSPGLRGS*CGQHGP
Trigger: TGGGCCGTGCTGTCCACACAAACTACCACGCAGCCC...CGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS CCA 90 bp GTTCACGTTCTGTGTCCTTTCCGGAGTGGTCGAAAGACCGCACCTTaGCGACTTTGTGCTGTACCGTTGAATAGTAGGCCAGCTTGGTTA +
Preference number: 5 (lower is better)
Translates to: VHVLCPFRSGRKTAP*RLCAVPLNSRPAWL
Trigger: TAACCAAGCTGGCCTACTATTCAACGGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCGACCACTCCGGAAAGGACACAGAACGTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000491212.1
ENST00000615291.3
ENST00000625859.1
ENST00000630982.2
CDS-3UTR CAA 90 bp TATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTTTGTGCTGTACCGTaGAATAGTAGGCCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: YLVRAHGAASRQTYLYRSLCAVP*NSRPAW
Trigger: CCAAGCTGGCCTACTATTCAACGGTACAGCACAAAG...AGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GTCCTCCTTGTCGACTTTCAGCCGCAGCTTCTCTTCGATGAGGTCTTTGAACTTTCGAAAGACCGCACCTaGGCGACTTTGTGCTGTACC +
Preference number: 5 (lower is better)
Translates to: VLLVDFQPQLLFDEVFELSKDRT*ATLCCT
Trigger: GGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCGA...AAGTTCAAAGACCTCATCGAAGAGAAGCTGCGGCTGAAAGTCGACAAGGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CAA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGTTGACGAGATGGTCTTaGATGAAGTCCAGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: LCGWGVCAASQQYHINTLLTRWS*MKSRQA
Trigger: AGCCTGCCTGGACTTCATCAAAGACCATCTCGTCAA...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATACCTTGGTCTCTGTGTaGACGAGATGGTCTTTGATG +
Preference number: 5 (lower is better)
Translates to: QYERLPGQSCVSPLGHTHTLVSV*TRWSLM
Trigger: CATCAAAGACCATCTCGTCAACACAGAGACCAAGGT...ATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp TCAGGGTCGGAATCCTTCTGGTACACGAAGGCCTCATGGGGGATGTTCTTGAGCACCTTGGTCTCTGTGTaGACGAGATGGTCTTTGATG +
Preference number: 5 (lower is better)
Translates to: SGSESFWYTKASWGMFLSTLVSV*TRWSLM
Trigger: CATCAAAGACCATCTCGTCAACACAGAGACCAAGGT...GCTCAAGAACATCCCCCATGAGGCCTTCGTGTACCAGAAGGATTCCGACCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp CTTGGTCTCTGTGTTGACGAGATGGTCTTTGATGAAGTCCAGGCAGGCTTCGATGTCGCCTGGATGACCTaGGTCTCTGTGTTGACGAGA +
Preference number: 5 (lower is better)
Translates to: LGLCVDEMVFDEVQAGFDVAWMT*VSVLTR
Trigger: TCTCGTCAACACAGAGACCAAGGTCATCCAGGCGAC...ATCGAAGCCTGCCTGGACTTCATCAAAGACCATCTCGTCAACACAGAGACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CAA 90 bp GGGGATGTTCTTGAGCACGAAGTTGCACCCCTTAATCAGGCACGTCATCACGTCTTCTTGAGCACGAAGTaGCACCCCTTAATCAGGCAC +
Preference number: 5 (lower is better)
Translates to: GDVLEHEVAPLNQARHHVFLSTK*HPLIRH
Trigger: GTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAGAA...GACGTGATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAGAACATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CAA 90 bp CTCATAGGGCGGCTCATGTTCACGTTCTGTGTCCTGGAAAACAGAGTAGGGGAGTTCTTGAGCACGAAGTaGCACCCCTTAATCAGGCAC +
Preference number: 5 (lower is better)
Translates to: LIGRLMFTFCVLENRVGEFLSTK*HPLIRH
Trigger: GTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAGAA...CTCCCCTACTCTGTTTTCCAGGACACAGAACGTGAACATGAGCCGCCCTATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CAA 90 bp CTCCACCTTCACGATGGAGACTCCAGAGCCGATATTGACAAGAAGATAGGGGAATCATGGGGGATGTTCTaGAGCACGAAGTTGCACCCC +
Preference number: 5 (lower is better)
Translates to: LHLHDGDSRADIDKKIGESWGMF*STKLHP
Trigger: GGGGTGCAACTTCGTGCTCAAGAACATCCCCCATGA...TTCCCCTATCTTCTTGTCAATATCGGCTCTGGAGTCTCCATCGTGAAGGTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp CGCCTGGATGACCTTGGTCTCTGTGTTGACGAGATGGTCTTTGATGAAGTCCAGAAAATGTGGGGGTGGTaGGTCTGGAACCGGAACTCA +
Preference number: 5 (lower is better)
Translates to: RLDDLGLCVDEMVFDEVQKMWGW*VWNRNS
Trigger: TGAGTTCCGGTTCCAGACCAACCACCCCCACATTTT...CTGGACTTCATCAAAGACCATCTCGTCAACACAGAGACCAAGGTCATCCAGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp CTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATACGTTGTCAAACTTCTTCGTTTaGGTGAGCAGAGCGCCAAGC +
Preference number: 5 (lower is better)
Translates to: LCGWGVCAASQQYHINTLSNFFV*VSRAPS
Trigger: GCTTGGCGCTCTGCTCACCAAAACGAAGAAGTTTGA...CAACGTATTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp ACCTTGGTCTCTGTGTTGACGAGATGGTCTTTGATGAAGTCCAGGCAGGCTTCGTTCGCCATGTCTTCTTaGGAGAACTCTTGGTCGGCG +
Preference number: 5 (lower is better)
Translates to: TLVSVLTRWSLMKSRQASFAMSS*ENSWSA
Trigger: CGCCGACCAAGAGTTCTCCAAAGAAGACATGGCGAA...CGAAGCCTGCCTGGACTTCATCAAAGACCATCTCGTCAACACAGAGACCAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp TGGATGACCTTGGTCTCTGTGTTGACGAGATGGTCTTTGATGAAGTCCAGGCAGAGCTGCCCAATGTCGTaGCTGATCATGTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: WMTLVSVLTRWSLMKSRQSCPMS*LIMCSR
Trigger: CCTGCTGCACATGATCAGCAACGACATTGGGCAGCT...CTGCCTGGACTTCATCAAAGACCATCTCGTCAACACAGAGACCAAGGTCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp TATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTGTACTGGTTAGGATaGTCCTGCTCAGCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: YLVRAHGAASRQTYLYRSLYWLG*SCSAPF
Trigger: GAAAGGAGCTGAGCAGGACAATCCTAACCAGTACAG...AGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp ATGCCCGCAATACGCTCTGCCACGATGAGGGACTCGCTGTGGGTCACGTCGTTCCTTGTAACTTCCTCTTaGCTTCTTCAAACCCAAAGT +
Preference number: 5 (lower is better)
Translates to: MPAIRSATMRDSLWVTSFLVTSS*LLQTQS
Trigger: ACTTTGGGTTTGAAGAAGCAAAGAGGAAGTTACAAG...GAACGACGTGACCCACAGCGAGTCCCTCATCGTGGCAGAGCGTATTGCGGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502512.1
ENST00000505228.5
ENST00000625442.1
ENST00000626423.2
CDS-3UTR CAA 90 bp GAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTCTGGGTCACACGCATCTGTGCCTTGTAACTTCCTCTTaGCTTCTTCAAACCCAAAGT +
Preference number: 5 (lower is better)
Translates to: ERLPGQSCVSPLGHTHLCLVTSS*LLQTQS
Trigger: ACTTTGGGTTTGAAGAAGCAAAGAGGAAGTTACAAG...GCACAGATGCGTGTGACCCAGAGGCGAGACGCAGCTTTGTCCTGGGAGACGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp ATCACGTCCTCCTTGTCGACTTTCAGCCGCAGCTTCTCTTCGATGAGGTCTTTGCTTTGTGCTGTACCGTaGAATAGTAGGCCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: ITSSLSTFSRSFSSMRSLLCAVP*NSRPAW
Trigger: CCAAGCTGGCCTACTATTCAACGGTACAGCACAAAG...CAAAGACCTCATCGAAGAGAAGCTGCGGCTGAAAGTCGACAAGGAGGACGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CAA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTTCGAAAGACCGCACCTaGGCGACTTTGTGCTGTACC +
Preference number: 5 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAASKDRT*ATLCCT
Trigger: GGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCGA...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTTGACGAGATGGTCTTaGATGAAGTCCAGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTLTRWS*MKSRQA
Trigger: AGCCTGCCTGGACTTCATCAAAGACCATCTCGTCAA...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp TATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTACCTTGGTCTCTGTGTaGACGAGATGGTCTTTGATG +
Preference number: 5 (lower is better)
Translates to: YLVRAHGAASRQTYLYRSTLVSV*TRWSLM
Trigger: CATCAAAGACCATCTCGTCAACACAGAGACCAAGGT...AGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp TTTAAAAACTCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTCAAACTTCTTCGTTTaGGTGAGCAGAGCGCCAAGC +
Preference number: 5 (lower is better)
Translates to: FKNSIWCVPTVLRPVRHTSNFFV*VSRAPS
Trigger: GCTTGGCGCTCTGCTCACCAAAACGAAGAAGTTTGA...GGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGAGTTTTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GCCACTGCGCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTGCCTGCACTTCCCCCTaGGAGAAGAAGTTGATGCTA +
Preference number: 5 (lower is better)
Translates to: ATARFTTSKEQRRLLNCFACTSP*EKKLML
Trigger: TAGCATCAACTTCTTCTCCAAGGGGGAAGTGCAGGC...AAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGCGCAGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR CAA 90 bp AATCTCATAGGGCGGCTCATGTTCACGTTCTGTGTCCTGGAAAACAGAGTAGGGCTTTGTGCTGTACCGTaGAATAGTAGGCCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: NLIGRLMFTFCVLENRVGLCAVP*NSRPAW
Trigger: CCAAGCTGGCCTACTATTCAACGGTACAGCACAAAG...CCCTACTCTGTTTTCCAGGACACAGAACGTGAACATGAGCCGCCCTATGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CAA 90 bp ACGCAGTTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGTCATGGGGGATGTTCTaGAGCACGAAGTTGCACCCC +
Preference number: 5 (lower is better)
Translates to: TQFPCGGKNTFLTSDKQKSWGMF*STKLHP
Trigger: GGGGTGCAACTTCGTGCTCAAGAACATCCCCCATGA...CTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAACTGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378466.9
ENST00000615291.3
CDS-3UTR CAA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTAAAATGTGGGGGTGGTaGGTCTGGAACCGGAACTCA +
Preference number: 5 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAAKMWGW*VWNRNS
Trigger: TGAGTTCCGGTTCCAGACCAACCACCCCCACATTTT...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTTTCGCCATGTCTTCTTaGGAGAACTCTTGGTCGGCG +
Preference number: 5 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAAFAMSS*ENSWSA
Trigger: CGCCGACCAAGAGTTCTCCAAAGAAGACATGGCGAA...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTAGCTGCCCAATGTCGTaGCTGATCATGTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPSCPMS*LIMCSR
Trigger: CCTGCTGCACATGATCAGCAACGACATTGGGCAGCT...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTGCCTGCACTTCCCCCTaGGAGAAGAAGTTGATGCTA +
Preference number: 5 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAAACTSP*EKKLML
Trigger: TAGCATCAACTTCTTCTCCAAGGGGGAAGTGCAGGC...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp TTTCCCTGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCTGGGACCTCGTACTaGAAGATGACGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: FPCGGKNTFLTSDKQKSPAGTSY*KMTLKS
Trigger: GCTCTTCAGCGTCATCTTCAAGTACGAGGTCCCAGC...CGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACAGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS GCA 90 bp CCAGGTGCTAGACACCTGCGTGTCCTACAGGCCAGTCTAGGGGACTaGTTTGCAAAGCACCCTTTGATCATCACATCAGAAATGTTTAAT +
Preference number: 5 (lower is better)
Translates to: PGARHLRVLQASLGD*FAKHPLIITSEMFN
Trigger: ATTAAACATTTCTGATGTGATGATCAAAGGGTGCTTTGCAAAGCAGTCCCCTAGACTGGCCTGTAGGACACGCAGGTGTCTAGCACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487804.1
ENST00000629615.1
CDS-3UTR CAA 90 bp ATGGTCTTTGATGAAGTCCAGGCAGGCTTCGATGTAGGTATTCTCAAACTTAATTTGGCGTTCTCCAGGTaGCGGAAGATCTCGTCGGGG +
Preference number: 5 (lower is better)
Translates to: MVFDEVQAGFDVGILKLNLAFSR*RKISSG
Trigger: CCCCGACGAGATCTTCCGCAACCTGGAGAACGCCAA...ATTAAGTTTGAGAATACCTACATCGAAGCCTGCCTGGACTTCATCAAAGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CAA 90 bp GCAGGCTTCGATGTAGGTATTCTCAAACTTAATGAAGTGCAGTCGAGCAGTGATGTCGCCTGGATGACCTaGGTCTCTGTGTTGACGAGA +
Preference number: 5 (lower is better)
Translates to: AGFDVGILKLNEVQSSSDVAWMT*VSVLTR
Trigger: TCTCGTCAACACAGAGACCAAGGTCATCCAGGCGAC...ATCACTGCTCGACTGCACTTCATTAAGTTTGAGAATACCTACATCGAAGCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CAA 90 bp CAGTTAAATAGATTCCAATATGAACGTCTCCCAGGACAAAGCTGCGTCTCGCCTTTCGCCATGTCTTCTTaGGAGAACTCTTGGTCGGCG +
Preference number: 5 (lower is better)
Translates to: QLNRFQYERLPGQSCVSPFAMSS*ENSWSA
Trigger: CGCCGACCAAGAGTTCTCCAAAGAAGACATGGCGAA...AGGCGAGACGCAGCTTTGTCCTGGGAGACGTTCATATTGGAATCTATTTAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GCGCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGGCCTGCACTTCCCCCTaGGAGAAGAAGTTGATGCTA +
Preference number: 5 (lower is better)
Translates to: ARFTTSKEQRRLLNCFLKACTSP*EKKLML
Trigger: TAGCATCAACTTCTTCTCCAAGGGGGAAGTGCAGGC...CTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR CAA 90 bp GTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTCTCTATTATAAATACGTTGATTaGAACGCAGTTTCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: VRAHGAASRQTYLYRSLYYKYVD*NAVSLW
Trigger: CCACAGGGAAACTGCGTTCAAATCAACGTATTTATA...ATAGAGAGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CACGCATCTGTGCGGCTGGGGTGTATGTGCCGCGTCACAGCAGTACCATATAAATATAAATACGTTGATTaGAACGCAGTTTCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: HASVRLGCMCRVTAVPYKYKYVD*NAVSLW
Trigger: CCACAGGGAAACTGCGTTCAAATCAACGTATTTATA...TTTATATGGTACTGCTGTGACGCGGCACATACACCCCAGCCGCACAGATGCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GGCTTCGATGTAGGTATTCTCAAACTTAATGAAGTGCAGTCGAGCAGTGATCTCTTCCTACAAAGGGTCTaGAAGGGACACGGCGGAAGG +
Preference number: 5 (lower is better)
Translates to: GFDVGILKLNEVQSSSDLFLQRV*KGHGGR
Trigger: CCTTCCGCCGTGTCCCTTCAAGACCCTTTGTAGGAA...GAGATCACTGCTCGACTGCACTTCATTAAGTTTGAGAATACCTACATCGAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS-3UTR CAA 90 bp TGTGGTGGTAAAAACACATTCCTGACAAGTGACAAGCAGAAGAGTCCGGCAGCTACCTTGGTCTCTGTGTaGACGAGATGGTCTTTGATG +
Preference number: 5 (lower is better)
Translates to: CGGKNTFLTSDKQKSPAATLVSV*TRWSLM
Trigger: CATCAAAGACCATCTCGTCAACACAGAGACCAAGGT...AGCTGCCGGACTCTTCTGCTTGTCACTTGTCAGGAATGTGTTTTTACCACCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CTCCTTGTCGACTTTCAGCCGCAGCTTCTCTTCGATGAGGTCTTTGAACTTGTAACCTTGGTCTCTGTGTaGACGAGATGGTCTTTGATG +
Preference number: 5 (lower is better)
Translates to: LLVDFQPQLLFDEVFELVTLVSV*TRWSLM
Trigger: CATCAAAGACCATCTCGTCAACACAGAGACCAAGGT...TACAAGTTCAAAGACCTCATCGAAGAGAAGCTGCGGCTGAAAGTCGACAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486396.1
ENST00000502770.2
ENST00000627774.1
ENST00000628687.1
CDS-3UTR CAA 90 bp TATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATCTTATAAATACGTTGATTaGAACGCAGTTTCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: YLVRAHGAASRQTYLYRSYKYVD*NAVSLW
Trigger: CCACAGGGAAACTGCGTTCAAATCAACGTATTTATA...AGATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp TCTATTTGGTGCGTGCCCACGGTGCTGCGTCCCGTCAGACATACCTGTATAGATTATAAATACGTTGATTaGAACGCAGTTTCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: SIWCVPTVLRPVRHTCIDYKYVD*NAVSLW
Trigger: CCACAGGGAAACTGCGTTCAAATCAACGTATTTATA...ATCTATACAGGTATGTCTGACGGGACGCAGCACCGTGGGCACGCACCAAATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp GCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGGACTGTACTGGTTAGGATaGTCCTGCTCAGCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: ALHYLKRAETSPKLLFEGLYWLG*SCSAPF
Trigger: GAAAGGAGCTGAGCAGGACAATCCTAACCAGTACAG...TCCTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS TCA 90 bp CTCAAACTTAATGAAGTGCAGTCGAGCAGTGATCTCTTCTTGAACTaGAATCTCATAGGGCGGCTCATGTTCACGTTCTGTGTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: LKLNEVQSSSDLFLN*NLIGRLMFTFCVLS
Trigger: GGAAAGGACACAGAACGTGAACATGAGCCGCCCTATGAGATTTCAGTTCAAGAAGAGATCACTGCTCGACTGCACTTCATTAAGTTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000615291.3
ENST00000630982.2
CDS-3UTR CAA 90 bp CGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGGAACTGTACTGGTTAGGATaGTCCTGCTCAGCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: RFTTSKEQRRLLNCFLKELYWLG*SCSAPF
Trigger: GAAAGGAGCTGAGCAGGACAATCCTAACCAGTACAG...TTCCTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS TCA 90 bp CTCAAACTTAATGAAGTGCAGTCGAGCAGTGATCTCTTCTTGAACTaGAATCTCATAGGGCGGCTCATGTTCACGTTCTGTGTCCTATGT +
Preference number: 5 (lower is better)
Translates to: LKLNEVQSSSDLFLN*NLIGRLMFTFCVLC
Trigger: ACATAGGACACAGAACGTGAACATGAGCCGCCCTATGAGATTTCAGTTCAAGAAGAGATCACTGCTCGACTGCACTTCATTAAGTTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS-3UTR CAA 90 bp ACTGCGCGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGGAGACGTCTCCTAAATaGCTTTTTGAAGGAATGTGC +
Preference number: 5 (lower is better)
Translates to: TARFTTSKEQRRLLNCFLETSPK*LFEGMC
Trigger: GCACATTCCTTCAAAAAGCAATTTAGGAGACGTCTC...CAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCGCGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS-3UTR CAA 90 bp CGCTTCACTACCTCAAAAGAGCAGAGACGTCTCCTAAATTGCTTTTTGAAGGAAGAGACGTCTCCTAAATaGCTTTTTGAAGGAATGTGC +
Preference number: 5 (lower is better)
Translates to: RFTTSKEQRRLLNCFLKEETSPK*LFEGMC
Trigger: GCACATTCCTTCAAAAAGCAATTTAGGAGACGTCTC...TTCCTTCAAAAAGCAATTTAGGAGACGTCTCTGCTCTTTTGAGGTAGTGAAGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000468002.2
ENST00000628406.1
CDS CCA 72 bp GCCTGTGCACGGACTGTCCGGCCCGCGGGCCACAGCTaGCCACGCCGCGGGAACGCGCGGCCTTTTCGGGGC +
Preference number: 6 (lower is better)
Translates to: ACARTVRPAGHS*PRRGNARPFRG
Trigger: GCCCCGAAAAGGCCGCGCGTTCCCGCGGCGTGGCCAGCTGTGGCCCGCGGGCCGGACAGTCCGTGCACAGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491212.1
ENST00000625859.1
CDS GCA 72 bp CACGCCCGGCGTCCACTCTCCAGAGAGCGGGGCCTGTaGACGGACTGTCCGGCCCGCGGGCCACAGCTGGCC +
Preference number: 6 (lower is better)
Translates to: HARRPLSRERGL*TDCPARGPQLA
Trigger: GGCCAGCTGTGGCCCGCGGGCCGGACAGTCCGTGCACAGGCCCCGCTCTCTGGAGAGTGGACGCCGGGCGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491212.1
ENST00000625859.1
CDS GCA 72 bp GCAGATGACGGCTCTGGGCCGCCTCCCCCGTGCTGCTaGCTGCACCTACCTGCTGCGTCCGGAGGAGCCCCG +
Preference number: 6 (lower is better)
Translates to: ADDGSGPPPPCC*LHLPAASGGAP
Trigger: CGGGGCTCCTCCGGACGCAGCAGGTAGGTGCAGGCAGCAGCACGGGGGAGGCGGCCCAGAGCCGTCATCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471361.1
ENST00000628707.1
CDS CCA 72 bp TCCGCCACGTCTCTGGGCCACAGACGAGACCCCCACTaGGCCCCCTCAGCTGCCCGGCGGCCTGAGCCGGAT +
Preference number: 6 (lower is better)
Translates to: SATSLGHRRDPH*APSAARRPEPD
Trigger: ATCCGGCTCAGGCCGCCGGGCAGCTGAGGGGGCCCAGTGGGGGTCTCGTCTGTGGCCCAGAGACGTGGCGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000515423.1
ENST00000629208.1
CDS GCA 72 bp ATGACGGCTCTGGGCCGCCTCCCCCGTGCTGCTGCCTaGACCTACCTGCTGCGTCCGGAGGAGCCCCGACCA +
Preference number: 6 (lower is better)
Translates to: MTALGRLPRAAA*TYLLRPEEPRP
Trigger: TGGTCGGGGCTCCTCCGGACGCAGCAGGTAGGTGCAGGCAGCAGCACGGGGGAGGCGGCCCAGAGCCGTCAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471361.1
ENST00000628707.1
CDS CAA 72 bp GCGCCACGTGACCCCCAAGGGACCCGCTCCACCTCCTaGCCCGCAAGCCTGGGGCAGGACAGGCACCCACAG +
Preference number: 6 (lower is better)
Translates to: APRDPQGTRSTS*PASLGQDRHPQ
Trigger: CTGTGGGTGCCTGTCCTGCCCCAGGCTTGCGGGCAAGGAGGTGGAGCGGGTCCCTTGGGGGTCACGTGGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487804.1
ENST00000629615.1
CDS TCA 72 bp GCCACTCCGCGCCCGCTGCGCCGGGCCGAGCTCGGGTaGTGCACTCATCAGCCCGGAGCTGCCTGCATAGTT +
Preference number: 6 (lower is better)
Translates to: ATPRPLRRAELG*CTHQPGAACIV
Trigger: AACTATGCAGGCAGCTCCGGGCTGATGAGTGCATCACCCGAGCTCGGCCCGGCGCAGCGGGCGCGGAGTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000468002.2
ENST00000505228.5
ENST00000615291.3
ENST00000626423.2
ENST00000628406.1
ENST00000630982.2
CDS GCA 72 bp ACATTCCCCGCCAGGAGGCCTTTCACCAGCGCCAGCTaGCGTTCCTCCCAGCCCAGCGCGTCCAGGGAGCGC +
Preference number: 6 (lower is better)
Translates to: TFPARRPFTSAS*RSSQPSASRER
Trigger: GCGCTCCCTGGACGCGCTGGGCTGGGAGGAACGGCAGCTGGCGCTGGTGAAAGGCCTCCTGGCGGGGAATGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000471361.1
ENST00000487804.1
ENST00000502512.1
ENST00000505228.5
ENST00000615291.3
ENST00000625442.1
ENST00000626423.2
ENST00000628707.1
ENST00000629615.1
ENST00000630982.2
CDS GCA 72 bp ACCCCAGCAGATGACGGCTCTGGGCCGCCTCCCCCGTaGTGCTGCCTGCACCTACCTGCTGCGTCCGGAGGA +
Preference number: 6 (lower is better)
Translates to: TPADDGSGPPPP*CCLHLPAASGG
Trigger: TCCTCCGGACGCAGCAGGTAGGTGCAGGCAGCAGCACGGGGGAGGCGGCCCAGAGCCGTCATCTGCTGGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471361.1
ENST00000628707.1
CDS TCA 72 bp AGGCACGAGTTCCCAGGTCCCACGTCCACGGCCGCCTaGACTCACGCCCGGCGTCCACTCTCCAGAGAGCGG +
Preference number: 6 (lower is better)
Translates to: RHEFPGPTSTAA*THARRPLSRER
Trigger: CCGCTCTCTGGAGAGTGGACGCCGGGCGTGAGTTCAGGCGGCCGTGGACGTGGGACCTGGGAACTCGTGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491212.1
ENST00000625859.1
CDS CCA 72 bp TTCTCCGCCCTCTCGGCTGCATCCACAGAGTCTGGCTaGCTCGCCACTGCGCGCTTCACTACCCCGTCCAGG +
Preference number: 6 (lower is better)
Translates to: FSALSAASTESG*LATARFTTPSR
Trigger: CCTGGACGGGGTAGTGAAGCGCGCAGTGGCGAGCCAGCCAGACTCTGTGGATGCAGCCGAGAGGGCGGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000505228.5
ENST00000615291.3
ENST00000626423.2
ENST00000630982.2
CDS GCA 72 bp CTCGGCTGCATCCACAGAGTCTGGCTGGCTCGCCACTaGGCGCTTCACTACCCCGTCCAGGGCCTCCTCAAA +
Preference number: 6 (lower is better)
Translates to: LGCIHRVWLARH*ALHYPVQGLLK
Trigger: TTTGAGGAGGCCCTGGACGGGGTAGTGAAGCGCGCAGTGGCGAGCCAGCCAGACTCTGTGGATGCAGCCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000505228.5
ENST00000515423.1
ENST00000615291.3
ENST00000626423.2
ENST00000629208.1
ENST00000630982.2
CDS GCA 72 bp CCAGTACTTCTGCCGGAACTTCTCCGCCCTCTCGGCTaGATCCACAGAGTCTGGCTGGCTCGCCACTGCGCG +
Preference number: 6 (lower is better)
Translates to: PVLLPELLRPLG*IHRVWLARHCA
Trigger: CGCGCAGTGGCGAGCCAGCCAGACTCTGTGGATGCAGCCGAGAGGGCGGAGAAGTTCCGGCAGAAGTACTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000505228.5
ENST00000615291.3
ENST00000626423.2
ENST00000630982.2
CDS GCA 72 bp ATTTCCAGCAAGTCAAAAGTGCCACTCCGCGCCCGCTaGGCCGGGCCGAGCTCGGGTGATGCACTCATCAGC +
Preference number: 6 (lower is better)
Translates to: ISSKSKVPLRAR*AGPSSGDALIS
Trigger: GCTGATGAGTGCATCACCCGAGCTCGGCCCGGCGCAGCGGGCGCGGAGTGGCACTTTTGACTTGCTGGAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000468002.2
ENST00000505228.5
ENST00000615291.3
ENST00000626423.2
ENST00000628406.1
ENST00000630982.2
CDS GCA 72 bp ACTCGTTCAGACAGTGCTCCCTGGTGTCCAGCAGGCTaGGCACGGTCAGGGTCCCATAGGCGAAGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: TRSDSAPWCPAG*ARSGSHRRRAA
Trigger: AGCAGCCCTTCGCCTATGGGACCCTGACCGTGCGCAGCCTGCTGGACACCAGGGAGCACTGTCTGAACGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000502512.1
ENST00000505228.5
ENST00000615291.3
ENST00000625442.1
ENST00000626423.2
ENST00000630982.2
CDS GCA 72 bp GGAGCTGAGCCGAGGGGCAGAGCTGAGTTTAGAGCCTaGCCCTGGGACCTGCCTGTCTGTGAAGTCACAGCC +
Preference number: 6 (lower is better)
Translates to: GAEPRGRAEFRA*PWDLPVCEVTA
Trigger: GGCTGTGACTTCACAGACAGGCAGGTCCCAGGGGCAGGCTCTAAACTCAGCTCTGCCCCTCGGCTCAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471361.1
ENST00000628707.1
CDS CCA 72 bp GGAGGGCGGGTCCAGGAGGAGCGGCAGGTCAACCAGTaGCCTCTCCAGCCGGTCCATTTCCAGCAAGTCAAA +
Preference number: 6 (lower is better)
Translates to: GGRVQEERQVNQ*PLQPVHFQQVK
Trigger: TTTGACTTGCTGGAAATGGACCGGCTGGAGAGGCCACTGGTTGACCTGCCGCTCCTCCTGGACCCGCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000468002.2
ENST00000505228.5
ENST00000515423.1
ENST00000615291.3
ENST00000626423.2
ENST00000628406.1
ENST00000629208.1
ENST00000630982.2
CDS GCA 72 bp CTGCCTGTCTGTGAAGTCACAGCCCCAAAGCCTCCTTaGTGTGAGCACCCTTCCAGGAGCCTGGCGTCAACC +
Preference number: 6 (lower is better)
Translates to: LPVCEVTAPKPP*CEHPSRSLAST
Trigger: GGTTGACGCCAGGCTCCTGGAAGGGTGCTCACAGCAAGGAGGCTTTGGGGCTGTGACTTCACAGACAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471361.1
ENST00000628707.1
CDS CCA 72 bp TGGTTAACGACCCGCCTATGTCGATGGCGAAGCGCTTaGCGTTCTCCAGGTTGCGGAAGATCTCGTCGGGGG +
Preference number: 6 (lower is better)
Translates to: WLTTRLCRWRSA*RSPGCGRSRRG
Trigger: CCCCCGACGAGATCTTCCGCAACCTGGAGAACGCCAAGCGCTTCGCCATCGACATAGGCGGGTCGTTAACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000514922.1
ENST00000615291.3
ENST00000629645.1
ENST00000630982.2
CDS CCA 72 bp TCCTTCTGGTACACGAAGGCCCCGCCCCCGGTCGCCTaGATGACCTTGGTCTCTGTGTTGACGAGATGGTCT +
Preference number: 6 (lower is better)
Translates to: SFWYTKAPPPVA*MTLVSVLTRWS
Trigger: AGACCATCTCGTCAACACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGGGGCCTTCGTGTACCAGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435556.8
ENST00000630982.2
CDS CCA 72 bp AGTGCAGGCCGCCTTAAAGGCCACGGAAGGCACGGGTaGCTTTTAAACCAGAGGCACGAGTTCCCAGGTCCC +
Preference number: 6 (lower is better)
Translates to: SAGRLKGHGRHG*LLNQRHEFPGP
Trigger: GGGACCTGGGAACTCGTGCCTCTGGTTTAAAAGCCACCCGTGCCTTCCGTGGCCTTTAAGGCGGCCTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491212.1
ENST00000625859.1
CDS TCA 72 bp AAAGGTCTAGAACAGAGCCTGGCCCGCCGTCATTACTaGGAGCACAGCCATCAGGCAGGAGGGTCTGCAGCG +
Preference number: 6 (lower is better)
Translates to: KGLEQSLARRHY*EHSHQAGGSAA
Trigger: CGCTGCAGACCCTCCTGCCTGATGGCTGTGCTCTCAGTAATGACGGCGGGCCAGGCTCTGTTCTAGACCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491212.1
ENST00000625859.1
CDS CAA 72 bp TTGGTTAACGACCCGCCTATGTCGATGGCGAAGCGCTaGGCGTTCTCCAGGTTGCGGAAGATCTCGTCGGGG +
Preference number: 6 (lower is better)
Translates to: LVNDPPMSMAKR*AFSRLRKISSG
Trigger: CCCCGACGAGATCTTCCGCAACCTGGAGAACGCCAAGCGCTTCGCCATCGACATAGGCGGGTCGTTAACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000514922.1
ENST00000615291.3
ENST00000629645.1
ENST00000630982.2
CDS CAA 90 bp TCCTTCTGGTACACGAAGGCCCCGCCCCCGGTCGCCTGGATGACCTaGGTCTCTGTGTTGACGAGATGGTCTTTGATGAAGTCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: SFWYTKAPPPVAWMT*VSVLTRWSLMKSRQ
Trigger: CTGCCTGGACTTCATCAAAGACCATCTCGTCAACACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGGGGCCTTCGTGTACCAGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435556.8
ENST00000630982.2
CDS CAA 90 bp CGGAGTGGTCGAAAGACCGCACCTTGGCGACTTTGTGCTGTACCGTaGAATAGTAGGCCAGCTTGGTTAACGACCCGCCTGCAGGGGAGA +
Preference number: 6 (lower is better)
Translates to: RSGRKTAPWRLCAVP*NSRPAWLTTRLQGR
Trigger: TCTCCCCTGCAGGCGGGTCGTTAACCAAGCTGGCCTACTATTCAACGGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCGACCACTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS CCA 72 bp GATTGTCCTGCTCAGCTCCTTTCAGGAACGCTCCGATaGCTCCCAGGTAGCCTTCGTGCCTCAGAAACAGCG +
Preference number: 6 (lower is better)
Translates to: DCPAQLLSGTLR*LPGSLRASETA
Trigger: CGCTGTTTCTGAGGCACGAAGGCTACCTGGGAGCCATCGGAGCGTTCCTGAAAGGAGCTGAGCAGGACAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000468002.2
ENST00000505228.5
ENST00000615291.3
ENST00000626423.2
ENST00000628406.1
ENST00000630982.2
CDS CCA 72 bp AAAGGGAGTAATTCGCGTTCCTCCCCTAGAGGTGGCTaGGAGGTGTCCGGGAGTCAGGAGCGTGGGAAAAAG +
Preference number: 6 (lower is better)
Translates to: KGSNSRSSPRGG*EVSGSQERGKK
Trigger: CTTTTTCCCACGCTCCTGACTCCCGGACACCTCCCAGCCACCTCTAGGGGAGGAACGCGAATTACTCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491212.1
ENST00000625859.1
CDS CCA 72 bp TTCACGTTCTGTGTCCTATGTCGATGGCGAAGCGCTTaGCGTTCTCCAGGTTGCGGAAGATCTCGTCGGGGG +
Preference number: 6 (lower is better)
Translates to: FTFCVLCRWRSA*RSPGCGRSRRG
Trigger: CCCCCGACGAGATCTTCCGCAACCTGGAGAACGCCAAGCGCTTCGCCATCGACATAGGACACAGAACGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS CAA 72 bp TACACGAAGGCCCCGCCCCCGGTCGCCTGGATGACCTaGGTCTCTGTGTTGACGAGATGGTCTTTGATGAAG +
Preference number: 6 (lower is better)
Translates to: YTKAPPPVAWMT*VSVLTRWSLMK
Trigger: CTTCATCAAAGACCATCTCGTCAACACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGGGGCCTTCGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435556.8
ENST00000630982.2
CDS CAA 72 bp GTTCACGTTCTGTGTCCTATGTCGATGGCGAAGCGCTaGGCGTTCTCCAGGTTGCGGAAGATCTCGTCGGGG +
Preference number: 6 (lower is better)
Translates to: VHVLCPMSMAKR*AFSRLRKISSG
Trigger: CCCCGACGAGATCTTCCGCAACCTGGAGAACGCCAAGCGCTTCGCCATCGACATAGGACACAGAACGTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486396.1
ENST00000627774.1
CDS CAA 90 bp CGGAGTGGTCGAAAGACCGCACCTTGGCGACTTTGTGCTGTACCGTaGAATAGTAGGCCAGCTTGGTTAACGACCCGCCTTTCTGGGGCT +
Preference number: 6 (lower is better)
Translates to: RSGRKTAPWRLCAVP*NSRPAWLTTRLSGA
Trigger: AGCCCCAGAAAGGCGGGTCGTTAACCAAGCTGGCCTACTATTCAACGGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCGACCACTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491212.1
ENST00000625859.1
CDS TCA 72 bp CCCGCTGCTTCACTTTGGAGTAGGGATCCGGGAAGTTaGACTCGTTCAGACAGTGCTCCCTGGTGTCCAGCA +
Preference number: 6 (lower is better)
Translates to: PAASLWSRDPGS*TRSDSAPWCPA
Trigger: TGCTGGACACCAGGGAGCACTGTCTGAACGAGTTCAACTTCCCGGATCCCTACTCCAAAGTGAAGCAGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000487804.1
ENST00000502512.1
ENST00000505228.5
ENST00000615291.3
ENST00000625442.1
ENST00000626423.2
ENST00000629615.1
ENST00000630982.2
CDS CAA 90 bp CGGAGTGGTCGAAAGACCGCACCTTGGCGACTTTGTGCTGTACCGTaGAATAGTAGGCCAGCTTGGTTAACGACCCGCCTATGTCGATGG +
Preference number: 6 (lower is better)
Translates to: RSGRKTAPWRLCAVP*NSRPAWLTTRLCRW
Trigger: CCATCGACATAGGCGGGTCGTTAACCAAGCTGGCCTACTATTCAACGGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCGACCACTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000514922.1
ENST00000615291.3
ENST00000629645.1
ENST00000630982.2
CDS GCA 72 bp GAAGCTTCCACTCTCTCTCTAAGAAGGGAGATGTACTaGCTTCTTCCGCCACGTCTCTGGGCCACAGACGAG +
Preference number: 6 (lower is better)
Translates to: EASTLSLRREMY*LLPPRLWATDE
Trigger: CTCGTCTGTGGCCCAGAGACGTGGCGGAAGAAGGCAGTACATCTCCCTTCTTAGAGAGAGAGTGGAAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515423.1
ENST00000629208.1
CDS CCA 72 bp TGGAACTTAAAAACCCTATGTCGATGGCGAAGCGCTTaGCGTTCTCCAGGTTGCGGAAGATCTCGTCGGGGG +
Preference number: 6 (lower is better)
Translates to: WNLKTLCRWRSA*RSPGCGRSRRG
Trigger: CCCCCGACGAGATCTTCCGCAACCTGGAGAACGCCAAGCGCTTCGCCATCGACATAGGGTTTTTAAGTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS CCA 72 bp CGACTTTGTGCTGTACCGTTGAATAGTAGGCCAGCTTaGTTAACGACCCGCCTGCAGGGGAGACACAAACCG +
Preference number: 6 (lower is better)
Translates to: RLCAVPLNSRPA*LTTRLQGRHKP
Trigger: CGGTTTGTGTCTCCCCTGCAGGCGGGTCGTTAACCAAGCTGGCCTACTATTCAACGGTACAGCACAAAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS CCA 72 bp GGCTCACCTTTCCGGAGTGGTCGAAAGACCGCACCTTaGCGACTTTGTGCTGTACCGTTGAATAGTAGGCCA +
Preference number: 6 (lower is better)
Translates to: GSPFRSGRKTAP*RLCAVPLNSRP
Trigger: TGGCCTACTATTCAACGGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCGACCACTCCGGAAAGGTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502770.2
ENST00000514922.1
ENST00000628687.1
ENST00000629645.1
CDS CCA 72 bp TGGAAGACAGGCAGTGGCAGGGTGGAAACGTCACCATaGTTCAGAACGACCCAAGCCACACTCAGAAGCTTC +
Preference number: 6 (lower is better)
Translates to: WKTGSGRVETSP*FRTTQATLRSF
Trigger: GAAGCTTCTGAGTGTGGCTTGGGTCGTTCTGAACCATGGTGACGTTTCCACCCTGCCACTGCCTGTCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515423.1
ENST00000629208.1
CDS CAA 72 bp CTGGAACTTAAAAACCCTATGTCGATGGCGAAGCGCTaGGCGTTCTCCAGGTTGCGGAAGATCTCGTCGGGG +
Preference number: 6 (lower is better)
Translates to: LELKNPMSMAKR*AFSRLRKISSG
Trigger: CCCCGACGAGATCTTCCGCAACCTGGAGAACGCCAAGCGCTTCGCCATCGACATAGGGTTTTTAAGTTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS CAA 72 bp CGAAAGACCGCACCTTGGCGACTTTGTGCTGTACCGTaGAATAGTAGGCCAGCTTGGTTAACGACCCGCCTG +
Preference number: 6 (lower is better)
Translates to: RKTAPWRLCAVP*NSRPAWLTTRL
Trigger: CAGGCGGGTCGTTAACCAAGCTGGCCTACTATTCAACGGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502770.2
ENST00000628687.1
CDS CCA 72 bp CGACTTTGTGCTGTACCGTTGAATAGTAGGCCAGCTTaGTTAACGACCCGCCTATGTCGATGGCGAAGCGCT +
Preference number: 6 (lower is better)
Translates to: RLCAVPLNSRPA*LTTRLCRWRSA
Trigger: AGCGCTTCGCCATCGACATAGGCGGGTCGTTAACCAAGCTGGCCTACTATTCAACGGTACAGCACAAAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000514922.1
ENST00000615291.3
ENST00000629645.1
ENST00000630982.2
CDS CCA 72 bp CTGTGTCCTTTCCGGAGTGGTCGAAAGACCGCACCTTaGCGACTTTGTGCTGTACCGTTGAATAGTAGGCCA +
Preference number: 6 (lower is better)
Translates to: LCPFRSGRKTAP*RLCAVPLNSRP
Trigger: TGGCCTACTATTCAACGGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCGACCACTCCGGAAAGGACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000491212.1
ENST00000615291.3
ENST00000625859.1
ENST00000630982.2
CDS CAA 72 bp CGAAAGACCGCACCTTGGCGACTTTGTGCTGTACCGTaGAATAGTAGGCCAGCTTGGTTAACGACCCGCCTA +
Preference number: 6 (lower is better)
Translates to: RKTAPWRLCAVP*NSRPAWLTTRL
Trigger: TAGGCGGGTCGTTAACCAAGCTGGCCTACTATTCAACGGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000514922.1
ENST00000615291.3
ENST00000629645.1
ENST00000630982.2
CDS CAA 72 bp CGAAAGACCGCACCTTGGCGACTTTGTGCTGTACCGTaGAATAGTAGGCCAGCTTGGTTAACGACCCGCCTT +
Preference number: 6 (lower is better)
Translates to: RKTAPWRLCAVP*NSRPAWLTTRL
Trigger: AAGGCGGGTCGTTAACCAAGCTGGCCTACTATTCAACGGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491212.1
ENST00000625859.1
CDS CCA 72 bp CGACTTTGTGCTGTACCGTTGAATAGTAGGCCAGCTTaGTTAACGACCCGCCTTTCTGGGGCTTGGTATCCT +
Preference number: 6 (lower is better)
Translates to: RLCAVPLNSRPA*LTTRLSGAWYP
Trigger: AGGATACCAAGCCCCAGAAAGGCGGGTCGTTAACCAAGCTGGCCTACTATTCAACGGTACAGCACAAAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491212.1
ENST00000625859.1
CDS GCA 72 bp AGACACCTGCGTGTCCTACAGGCCAGTCTAGGGGACTaGTTTGCAAAGCACCCTTTGATCATCACATCAGAA +
Preference number: 6 (lower is better)
Translates to: RHLRVLQASLGD*FAKHPLIITSE
Trigger: TTCTGATGTGATGATCAAAGGGTGCTTTGCAAAGCAGTCCCCTAGACTGGCCTGTAGGACACGCAGGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487804.1
ENST00000629615.1
CDS GCA 72 bp CCTGCGTGTCCTACAGGCCAGTCTAGGGGACTGCTTTaGAAAGCACCCTTTGATCATCACATCAGAAATGTT +
Preference number: 6 (lower is better)
Translates to: PACPTGQSRGLL*KAPFDHHIRNV
Trigger: AACATTTCTGATGTGATGATCAAAGGGTGCTTTGCAAAGCAGTCCCCTAGACTGGCCTGTAGGACACGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487804.1
ENST00000629615.1
CDS CAA 72 bp AATCCACGAGCCAGGGTCTTTCTTGTAACTTCCTCTTaGCTTCTTCAAACCCAAAGTAGGGGTCGGATTCAA +
Preference number: 6 (lower is better)
Translates to: NPRARVFLVTSS*LLQTQSRGRIQ
Trigger: TTGAATCCGACCCCTACTTTGGGTTTGAAGAAGCAAAGAGGAAGTTACAAGAAAGACCCTGGCTCGTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000378466.9
ENST00000435556.8
ENST00000471361.1
ENST00000502512.1
ENST00000505228.5
ENST00000615291.3
ENST00000625442.1
ENST00000626423.2
ENST00000628707.1
ENST00000630982.2
CDS CAA 72 bp CAGGCCAGTCTAGGGGACTGCTTTGCAAAGCACCCTTaGATCATCACATCAGAAATGTTTAATTCCTACCAC +
Preference number: 6 (lower is better)
Translates to: QASLGDCFAKHP*IITSEMFNSYH
Trigger: GTGGTAGGAATTAAACATTTCTGATGTGATGATCAAAGGGTGCTTTGCAAAGCAGTCCCCTAGACTGGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487804.1
ENST00000629615.1