RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PANK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000125779

Ensembl transcript IDs: ENST00000316562.9, ENST00000336066.8, ENST00000471830.1, ENST00000497424.5, ENST00000610179.6, ENST00000610179.7, ENST00000621507.1, ENST00000643504.2, ENST00000646394.1

Found 1017 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTGGATCTGCATCTCACGCCCACTGCACACCGTTCCTCTCCATCTaGCCTTCCCTCCCAGGCCCCCGGTCGGGGGAGCAGGTGTGGCAA +
Preference number: 1 (lower is better)
Translates to: GGSASHAHCTPFLSI*PSLPGPRSGEQVWQ
Trigger: TTGCCACACCTGCTCCCCCGACCGGGGGCCTGGGAGGGAAGGGCAGATGGAGAGGAACGGTGTGCAGTGGGCGTGAGATGCAGATCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR GCA 90 bp AGCTGGAACACGGGTGTCTCTGCTGCCTCCATGCGGCTGGCACCCTaGCCATCCCTCCCTGACCACAGCCTTAAACGGAGGGGAGCAGGG +
Preference number: 1 (lower is better)
Translates to: SWNTGVSAASMRLAP*PSLPDHSLKRRGAG
Trigger: CCCTGCTCCCCTCCGTTTAAGGCTGTGGTCAGGGAGGGATGGGCAGGGTGCCAGCCGCATGGAGGCAGCAGAGACACCCGTGTTCCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 90 bp CCCTTTGCCAGTCCCAAGCCTGGTGGATCTGCATCTCACGCCCACTaGACACCGTTCCTCTCCATCTGCCCTTCCCTCCCAGGCCCCCGG +
Preference number: 1 (lower is better)
Translates to: PFASPKPGGSASHAH*TPFLSICPSLPGPR
Trigger: CCGGGGGCCTGGGAGGGAAGGGCAGATGGAGAGGAACGGTGTGCAGTGGGCGTGAGATGCAGATCCACCAGGCTTGGGACTGGCAAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR GCA 90 bp GCCACGCCTAGTGGAACAGCCCACAGCCCACATATCAGTTCCCCTTaGCCCAGCTGGAACACGGGTGTCTCTGCTGCCTCCATGCGGCTG +
Preference number: 1 (lower is better)
Translates to: ATPSGTAHSPHISSP*PSWNTGVSAASMRL
Trigger: CAGCCGCATGGAGGCAGCAGAGACACCCGTGTTCCAGCTGGGGCAAGGGGAACTGATATGTGGGCTGTGGGCTGTTCCACTAGGCGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 90 bp AGTGGAACAGCCCACAGCCCACATATCAGTTCCCCTTGCCCCAGCTaGAACACGGGTGTCTCTGCTGCCTCCATGCGGCTGGCACCCTGC +
Preference number: 1 (lower is better)
Translates to: SGTAHSPHISSPCPS*NTGVSAASMRLAPC
Trigger: GCAGGGTGCCAGCCGCATGGAGGCAGCAGAGACACCCGTGTTCCAGCTGGGGCAAGGGGAACTGATATGTGGGCTGTGGGCTGTTCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 90 bp GGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTaGAGGAGGGTGAGGCCACCAACAGCGCTGCTGGCAGCAGAGGAG +
Preference number: 1 (lower is better)
Translates to: GTSRRMVVPSLVPGY*RRVRPPTALLAAEE
Trigger: CTCCTCTGCTGCCAGCAGCGCTGTTGGTGGCCTCACCCTCCTCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 90 bp ACCCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTaGGTACTGGAGGAGGGTGAGGCCACCAACAGCGCTGCTGGCAGC +
Preference number: 1 (lower is better)
Translates to: TLWYKQEDGGAIFGA*VLEEGEATNSAAGS
Trigger: GCTGCCAGCAGCGCTGTTGGTGGCCTCACCCTCCTCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 90 bp GCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTaGCCCAGGGAGCAGCACCCTGTGGTACAAGCAGGAGGATGGTGG +
Preference number: 1 (lower is better)
Translates to: ALASVSMGSEQVHRS*PREQHPVVQAGGWW
Trigger: CCACCATCCTCCTGCTTGTACCACAGGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR TCA 90 bp AGCAAGGGCTGCATGGTGACCCACGTCGAGCAGTGGACAACCTCCTaGACGCAGCACAGCAGAGGCAGCAGGACCACAAAACAGGGGCCT +
Preference number: 1 (lower is better)
Translates to: SKGCMVTHVEQWTTS*TQHSRGSRTTKQGP
Trigger: AGGCCCCTGTTTTGTGGTCCTGCTGCCTCTGCTGTGCTGCGTTCAGGAGGTTGTCCACTGCTCGACGTGGGTCACCATGCAGCCCTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 90 bp GTGTGGCCGTTGCTGCTCTCCTCACCACCCCTCACTAGGACCGAGTaGCTTCCCAGCTTCCATCAAGGCCAGCCACGATCTTGCAACCAA +
Preference number: 1 (lower is better)
Translates to: VWPLLLSSPPLTRTE*LPSFHQGQPRSCNQ
Trigger: TTGGTTGCAAGATCGTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTGAGGAGAGCAGCAACGGCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR TCA 90 bp GCCTGGACAGCTGCTGGCCCCTCCCCTACCTTGGCCAGTTCCAAGTaGGGACCAGTGGTGATGTGTGGCTGCAACTGTTGTGGTCACTTA +
Preference number: 1 (lower is better)
Translates to: AWTAAGPSPTLASSK*GPVVMCGCNCCGHL
Trigger: TAAGTGACCACAACAGTTGCAGCCACACATCACCACTGGTCCTCACTTGGAACTGGCCAAGGTAGGGGAGGGGCCAGCAGCTGTCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR GCA 90 bp GCACCCACACAAGGTCCCAATGCAGCAGCACCCATATTTCCTAAGTaGCAAGGCCCATGTGCAGAGGTGGCCACGCCTAGTGGAACAGCC +
Preference number: 1 (lower is better)
Translates to: APTQGPNAAAPIFPK*QGPCAEVATPSGTA
Trigger: GGCTGTTCCACTAGGCGTGGCCACCTCTGCACATGGGCCTTGGCACTTAGGAAATATGGGTGCTGCTGCATTGGGACCTTGTGTGGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 90 bp TGGGGGAACTCTCTTCTCAGCTCCCTTTGCCAGTCCCAAGCCTGGTaGATCTGCATCTCACGCCCACTGCACACCGTTCCTCTCCATCTG +
Preference number: 1 (lower is better)
Translates to: WGNSLLSSLCQSQAW*ICISRPLHTVPLHL
Trigger: CAGATGGAGAGGAACGGTGTGCAGTGGGCGTGAGATGCAGATCCACCAGGCTTGGGACTGGCAAAGGGAGCTGAGAAGAGAGTTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR GCA 90 bp CAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTaGTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATATGGGCAC +
Preference number: 1 (lower is better)
Translates to: QGGCRALGFSLLVQG*FVQAHPCLQQQYGH
Trigger: GTGCCCATATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 90 bp AACTCTCTTCTCAGCTCCCTTTGCCAGTCCCAAGCCTGGTGGATCTaGATCTCACGCCCACTGCACACCGTTCCTCTCCATCTGCCCTTC +
Preference number: 1 (lower is better)
Translates to: NSLLSSLCQSQAWWI*ISRPLHTVPLHLPF
Trigger: GAAGGGCAGATGGAGAGGAACGGTGTGCAGTGGGCGTGAGATGCAGATCCACCAGGCTTGGGACTGGCAAAGGGAGCTGAGAAGAGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR CCA 90 bp TCAGGCCTTCCTTTCTCACCTGGACCACGGTCACAGCCCCCTTCATaGCCACTAGTGGAGGGCAGACTGAAAGGGACAGCTGCTAAGACA +
Preference number: 1 (lower is better)
Translates to: SGLPFSPGPRSQPPS*PLVEGRLKGTAAKT
Trigger: TGTCTTAGCAGCTGTCCCTTTCAGTCTGCCCTCCACTAGTGGCCATGAAGGGGGCTGTGACCGTGGTCCAGGTGAGAAAGGAAGGCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 90 bp CTTTGGGGGAACTCTCTTCTCAGCTCCCTTTGCCAGTCCCAAGCCTaGTGGATCTGCATCTCACGCCCACTGCACACCGTTCCTCTCCAT +
Preference number: 1 (lower is better)
Translates to: LWGNSLLSSLCQSQA*WICISRPLHTVPLH
Trigger: ATGGAGAGGAACGGTGTGCAGTGGGCGTGAGATGCAGATCCACCAGGCTTGGGACTGGCAAAGGGAGCTGAGAAGAGAGTTCCCCCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR GCA 90 bp GCCAGCCACGATCTTGCAACCAATTGTGGGCAACCTCAATTCAGATaGCTAGAGAGCTCCTCTTCTCAGTCCCCTGAGCCACAGGCCCCT +
Preference number: 1 (lower is better)
Translates to: ASHDLATNCGQPQFR*LESSSSQSPEPQAP
Trigger: AGGGGCCTGTGGCTCAGGGGACTGAGAAGAGGAGCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 90 bp GCAGACTTGTTTGTGCTTTGGGGGAACTCTCTTCTCAGCTCCCTTTaGCAGTCCCAAGCCTGGTGGATCTGCATCTCACGCCCACTGCAC +
Preference number: 1 (lower is better)
Translates to: ADLFVLWGNSLLSSL*QSQAWWICISRPLH
Trigger: GTGCAGTGGGCGTGAGATGCAGATCCACCAGGCTTGGGACTGGCAAAGGGAGCTGAGAAGAGAGTTCCCCCAAAGCACAAACAAGTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR TCA 90 bp CAGCCAGAGAACAGAGAATCCTGGAATGCAGAGTACAGTGGAGTCTaGAGCCCCCTGGCCTCCCTGAGCTCTGCAAACAGCTGGATACAG +
Preference number: 1 (lower is better)
Translates to: QPENRESWNAEYSGV*SPLASLSSANSWIQ
Trigger: CTGTATCCAGCTGTTTGCAGAGCTCAGGGAGGCCAGGGGGCTTCAGACTCCACTGTACTCTGCATTCCAGGATTCTCTGTTCTCTGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR GCA 90 bp ATCACTCTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTaGTCTGCACCCACACAAGGTCCCAATGCAGCAGCACCCATATTT +
Preference number: 1 (lower is better)
Translates to: ITLQGTKLPSTQQPS*SAPTQGPNAAAPIF
Trigger: AAATATGGGTGCTGCTGCATTGGGACCTTGTGTGGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAGAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 90 bp AGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACGATCTTaGAACCAATTGTGGGCAACCTCAATTCAGATGCCTAGAGAGCTC +
Preference number: 1 (lower is better)
Translates to: RTEWLPSFHQGQPRS*NQLWATSIQMPREL
Trigger: GAGCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR TCA 90 bp GAGAAGGCAGTGTCTCGGGGCTGGAGCTCAGAGGTAAGGGGTGGTTaGAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGACTGCT +
Preference number: 1 (lower is better)
Translates to: EKAVSRGWSSEVRGG*SVPWKSVKVMLMTA
Trigger: AGCAGTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTTACCTCTGAGCTCCAGCCCCGAGACACTGCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 90 bp CAGAGAGAAGGCAGTGTCTCGGGGCTGGAGCTCAGAGGTAAGGGGTaGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGAC +
Preference number: 1 (lower is better)
Translates to: QREGSVSGLELRGKG*LKCSLEISQGDAND
Trigger: GTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTTACCTCTGAGCTCCAGCCCCGAGACACTGCCTTCTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 90 bp CTCCCCTACCTTGGCCAGTTCCAAGTGAGGACCAGTGGTGATGTGTaGCTGCAACTGTTGTGGTCACTTAGGCAAGCTCTTGTGTCTTTG +
Preference number: 1 (lower is better)
Translates to: LPYLGQFQVRTSGDV*LQLLWSLRQALVSL
Trigger: CAAAGACACAAGAGCTTGCCTAAGTGACCACAACAGTTGCAGCCACACATCACCACTGGTCCTCACTTGGAACTGGCCAAGGTAGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR TCA 90 bp AGACAGACAGTCCCGGGTTTGAGTCCAGCTCTACTCTTTTCCAGCTaGGTGACCCTGGGCAGCCTTACTCATCCGTTCAGTTTCCTTTTC +
Preference number: 1 (lower is better)
Translates to: RQTVPGLSPALLFSS*VTLGSLTHPFSFLF
Trigger: GAAAAGGAAACTGAACGGATGAGTAAGGCTGCCCAGGGTCACTCAGCTGGAAAAGAGTAGAGCTGGACTCAAACCCGGGACTGTCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 90 bp TGGGCAGCCTTACTCATCCGTTCAGTTTCCTTTTCTGTTAAATTGTaGGAACAGCAAGGGCTGCATGGTGACCCACGTCGAGCAGTGGAC +
Preference number: 1 (lower is better)
Translates to: WAALLIRSVSFSVKL*EQQGLHGDPRRAVD
Trigger: GTCCACTGCTCGACGTGGGTCACCATGCAGCCCTTGCTGTTCCCACAATTTAACAGAAAAGGAAACTGAACGGATGAGTAAGGCTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 90 bp TTTATGGGCACCTCACAACCTGAAGGTGGTGAGACGGCAGTAAGCTaGGATGAGGATGTGGGCACTGCTGCACAGAGATCAACAAATGCA +
Preference number: 1 (lower is better)
Translates to: FMGTSQPEGGETAVS*DEDVGTAAQRSTNA
Trigger: TGCATTTGTTGATCTCTGTGCAGCAGTGCCCACATCCTCATCCCAGCTTACTGCCGTCTCACCACCTTCAGGTTGTGAGGTGCCCATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 90 bp CTTCCCAGCTTCCATCAAGGCCAGCCACGATCTTGCAACCAATTGTaGGCAACCTCAATTCAGATGCCTAGAGAGCTCCTCTTCTCAGTC +
Preference number: 1 (lower is better)
Translates to: LPSFHQGQPRSCNQL*ATSIQMPRELLFSV
Trigger: GACTGAGAAGAGGAGCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCTGGCCTTGATGGAAGCTGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 90 bp CATGTTAGTCCTCCAGATTGTGCTGCTTCTGCCAGTGTACCCACTTaGATCAGAACAGTCCGCCCACTACCCAAGGAAATTCTGCCAAGA +
Preference number: 1 (lower is better)
Translates to: HVSPPDCAASASVPT*IRTVRPLPKEILPR
Trigger: TCTTGGCAGAATTTCCTTGGGTAGTGGGCGGACTGTTCTGATGCAAGTGGGTACACTGGCAGAAGCAGCACAATCTGGAGGACTAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 90 bp TACCCACTTGCATCAGAACAGTCCGCCCACTACCCAAGGAAATTCTaGCAAGAAAAGAAGCCCTGTCTCTCCAGACATTCATTCCCAGGA +
Preference number: 1 (lower is better)
Translates to: YPLASEQSAHYPRKF*QEKKPCLSRHSFPG
Trigger: TCCTGGGAATGAATGTCTGGAGAGACAGGGCTTCTTTTCTTGGCAGAATTTCCTTGGGTAGTGGGCGGACTGTTCTGATGCAAGTGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 90 bp GAGCACAACCAGATTTTTCTGATTGACTTTCTATCTGCGACAGGATaGTCAAGATCAGGCTCTGTAGCTGACAGCAGTGGCACAGGCCTC +
Preference number: 1 (lower is better)
Translates to: EHNQIFLIDFLSATG*SRSGSVADSSGTGL
Trigger: GAGGCCTGTGCCACTGCTGTCAGCTACAGAGCCTGATCTTGAGCATCCTGTCGCAGATAGAAAGTCAATCAGAAAAATCTGGTTGTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR CCA 90 bp GTGACAGCTGGTCTTCCTAGAGTGTTGCTGGTAACTATCGCCTCTTaGTCTTCTGACATCATTGCCAGGAACGGGGCACTTTTTCGTCTT +
Preference number: 1 (lower is better)
Translates to: VTAGLPRVLLVTIAS*SSDIIARNGALFRL
Trigger: AAGACGAAAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGACCAAGAGGCGATAGTTACCAGCAACACTCTAGGAAGACCAGCTGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR GCA 90 bp AGCCTCTCCCTGAGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTaGTCAACTCTCGGTTATTTTTCTCACCCTACCTTAGAACTCATG +
Preference number: 1 (lower is better)
Translates to: SLSLSSRFLCSFLRH*STLGYFSHPTLELM
Trigger: CATGAGTTCTAAGGTAGGGTGAGAAAAATAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCTCAGGGAGAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 90 bp TCTGACATCATTGCCAGGAACGGGGCACTTTTTCGTCTTGTAGTTTaGCCCTCGGGTTTCCTCACTAGGTATTGTGTAACTCCCTCAAAA +
Preference number: 1 (lower is better)
Translates to: SDIIARNGALFRLVV*PSGFLTRYCVTPSK
Trigger: TTTTGAGGGAGTTACACAATACCTAGTGAGGAAACCCGAGGGCCAAACTACAAGACGAAAAAGTGCCCCGTTCCTGGCAATGATGTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR GCA 90 bp TATTTTTCTCACCCTACCTTAGAACTCATGAAATCCCCCTTGCTTTaGCCACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCC +
Preference number: 1 (lower is better)
Translates to: YFSHPTLELMKSPLL*PPTCISFSALYLQP
Trigger: GGGTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGTTCTAAGGTAGGGTGAGAAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR TCA 90 bp GTAGAGCCCAAATTGTTACAAGATGCAAAGATGTACTCCACTTTTTaGCCAAGCATCAGCACCTTTGGCTTACCATCCAGTCCTTACTTC +
Preference number: 1 (lower is better)
Translates to: VEPKLLQDAKMYSTF*PSISTFGLPSSPYF
Trigger: GAAGTAAGGACTGGATGGTAAGCCAAAGGTGCTGATGCTTGGTCAAAAAGTGGAGTACATCTTTGCATCTTGTAACAATTTGGGCTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR GCA 90 bp CATGCATATCATTCTCAGCTCTGTATCTCCAACCCAAATACCCAGTaGTTATTTGGAGTCTCAAAATCACGTAGTCCACAAATGAGCCCA +
Preference number: 1 (lower is better)
Translates to: HAYHSQLCISNPNTQ*LFGVSKSRSPQMSP
Trigger: TGGGCTCATTTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACAGAGCTGAGAATGATATGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 90 bp ACCTTACTTTGCCAATTCAGCTGTAGAGCCCAAATTGTTACAAGATaGAAAGATGTACTCCACTTTTTGACCAAGCATCAGCACCTTTGG +
Preference number: 1 (lower is better)
Translates to: TLLCQFSCRAQIVTR*KDVLHFLTKHQHLW
Trigger: CCAAAGGTGCTGATGCTTGGTCAAAAAGTGGAGTACATCTTTGCATCTTGTAACAATTTGGGCTCTACAGCTGAATTGGCAAAGTAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR CCA 90 bp CAGATGGACATGTCCAGATTCATGCCTAAATATCCAGTTGATAACTaGAAAATGCTGGTTCACGGTTCTTTAGTAAAGATTAATAAGGGA +
Preference number: 1 (lower is better)
Translates to: QMDMSRFMPKYPVDN*KMLVHGSLVKINKG
Trigger: TCCCTTATTAATCTTTACTAAAGAACCGTGAACCAGCATTTTCCAGTTATCAACTGGATATTTAGGCATGAATCTGGACATGTCCATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR TCA 90 bp TCCGCCTCCCAGGTTCACGCCATTCTCCCGCCTCGGGAGCTGGGACAACAGGTGGCAAGGGCTGCATGGTaGCCCACGTCGAGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: SASQVHAILPPRELGQQVARAAW*PTSSSG
Trigger: TCCACTGCTCGACGTGGGTCACCATGCAGCCCTTGC...CACCTGTTGTCCCAGCTCCCGAGGCGGGAGAATGGCGTGAACCTGGGAGGCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR TCA 90 bp CTGCATCTCACGCCCACTGCACACCGTTCCTCTCCATCTGCCCTTCCCTCCCAGTCAAGAACCCTGCTGTaGGCCGGGCGCAGGGGCTCA +
Preference number: 2 (lower is better)
Translates to: LHLTPTAHRSSPSALPSQSRTLL*AGRRGS
Trigger: TGAGCCCCTGCGCCCGGCTCACAGCAGGGTTCTTGA...CTGGGAGGGAAGGGCAGATGGAGAGGAACGGTGTGCAGTGGGCGTGAGATGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR GCA 90 bp GGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTATGCGGCTGGCACCCTaGCCATCCCTCCCTGACCAC +
Preference number: 2 (lower is better)
Translates to: GAGRLQSLGVFPPGPRLLMRLAP*PSLPDH
Trigger: GTGGTCAGGGAGGGATGGGCAGGGTGCCAGCCGCAT...AAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp CTGCATCTCACGCCCACTGCACACCGTTCCTCTCCATCTGCCCTTCCCTCCCAGCACGGGTGTCTCTGCTaGCTCCATGCGGCTGGCACC +
Preference number: 2 (lower is better)
Translates to: LHLTPTAHRSSPSALPSQHGCLC*LHAAGT
Trigger: GGTGCCAGCCGCATGGAGGCAGCAGAGACACCCGTG...CTGGGAGGGAAGGGCAGATGGAGAGGAACGGTGTGCAGTGGGCGTGAGATGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CCA 90 bp AGGCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCACTGCCTCCATGCGGCTaGCACCCTGCCCATCCCTCC +
Preference number: 2 (lower is better)
Translates to: RPWPRSPWEVSKFTGVGPLPPCG*HPAHPS
Trigger: GGAGGGATGGGCAGGGTGCCAGCCGCATGGAGGCAG...TGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp TCCGCCTCCCAGGTTCACGCCATTCTCCCGCCTCGGGAGCTGGGACAACAGGTGGGATCACCTGGGGTCTaGAGTTCGAGACCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: SASQVHAILPPRELGQQVGSPGV*SSRPAW
Trigger: CCAGGCTGGTCTCGAACTCCAGACCCCAGGTGATCC...CACCTGTTGTCCCAGCTCCCGAGGCGGGAGAATGGCGTGAACCTGGGAGGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR TCA 90 bp AGGCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCAGGTACTGGAGGAGGGTaGGGCCACCAACAGCGCTGC +
Preference number: 2 (lower is better)
Translates to: RPWPRSPWEVSKFTGVGPGTGGG*GHQQRC
Trigger: GCAGCGCTGTTGGTGGCCTCACCCTCCTCCAGTACC...TGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp AGTAGGGGCACAGACTTGTGCCTCGCTTCCCAGCAGCTGCCCAGTGCCTCTGTCCCCCTGCCCTTCCTGTaGCATAGTGTGCAAGCGGGG +
Preference number: 2 (lower is better)
Translates to: SRGTDLCLASQQLPSASVPLPFL*HSVQAG
Trigger: CCCCGCTTGCACACTATGCCACAGGAAGGGCAGGGG...GACAGAGGCACTGGGCAGCTGCTGGGAAGCGAGGCACAAGTCTGTGCCCCTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR TCA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACCAGTGGACAACCTCCTaGACGCAGCACAGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: HHPSLGPSGFPASIKASHQWTTS*TQHSRG
Trigger: GCCTCTGCTGTGCTGCGTTCAGGAGGTTGTCCACTG...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp AGGCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCAGCAAGGGCTGCATGGTaGCCCACGTCGAGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: RPWPRSPWEVSKFTGVGPARAAW*PTSSSG
Trigger: TCCACTGCTCGACGTGGGTCACCATGCAGCCCTTGC...TGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp GGGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTCCTACCAAGAGCACCTaGAGCCTGGCACTCTCCTCA +
Preference number: 2 (lower is better)
Translates to: GSREAAEPWGFPSWSKAAPTKST*SLALSS
Trigger: TGAGGAGAGTGCCAGGCTGCAGGTGCTCTTGGTAGG...AGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp GGGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTGGTGCCATCTTTGGTaGCTGGGTACTGGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: GSREAAEPWGFPSWSKAAWCHLW*LGTGGG
Trigger: CCCTCCTCCAGTACCCAGGCACCAAAGATGGCACCA...AGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACGCAGTGTCTCGGGGCTaGAGCTCAGAGGTAAGGGGT +
Preference number: 2 (lower is better)
Translates to: HHPSLGPSGFPASIKASHAVSRG*SSEVRG
Trigger: ACCCCTTACCTCTGAGCTCCAGCCCCGAGACACTGC...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp TCCGCCTCCCAGGTTCACGCCATTCTCCCGCCTCGGGAGCTGGGACAACAGGTGGGTCTCCATGGGAAGTaGGCAAGTTCACAGGAGTTG +
Preference number: 2 (lower is better)
Translates to: SASQVHAILPPRELGQQVGLHGK*ASSQEL
Trigger: CAACTCCTGTGAACTTGCTCACTTCCCATGGAGACC...CACCTGTTGTCCCAGCTCCCGAGGCGGGAGAATGGCGTGAACCTGGGAGGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR GCA 90 bp GGGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTGCCAGTGTACCCACTTaGATCAGAACAGTCCGCCCA +
Preference number: 2 (lower is better)
Translates to: GSREAAEPWGFPSWSKAAASVPT*IRTVRP
Trigger: TGGGCGGACTGTTCTGATGCAAGTGGGTACACTGGC...AGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp ACTCTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCGAACACGGGTGTCTCTaGTGCCTCCATGCGGCTGGC +
Preference number: 2 (lower is better)
Translates to: TLQGTKLPSTQQPSCSAPEHGCL*CLHAAG
Trigger: GCCAGCCGCATGGAGGCAGCAGAGACACCCGTGTTC...GGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp GCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCGAACACGGGTGTCTCTaGTGCCTCCATGCGGCTGGC +
Preference number: 2 (lower is better)
Translates to: AEPWGFPSWSKAALYRPIEHGCL*CLHAAG
Trigger: GCCAGCCGCATGGAGGCAGCAGAGACACCCGTGTTC...GATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp CTGCATCTCACGCCCACTGCACACCGTTCCTCTCCATCTGCCCTTCCCTCCCAGAAACCAGATTCTCCCTaGTCCCCTGAGGGGGTGTCA +
Preference number: 2 (lower is better)
Translates to: LHLTPTAHRSSPSALPSQKPDSP*SPEGVS
Trigger: TGACACCCCCTCAGGGGATCAGGGAGAATCTGGTTT...CTGGGAGGGAAGGGCAGATGGAGAGGAACGGTGTGCAGTGGGCGTGAGATGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR TCA 90 bp AGTGATTGTGATGGAAGCCCCTGCCCTTCCTGTGGCATAGTGTGCAAGCGGGGGAGGCAGAGGTTGCAGTaGGCTGAGATCGCCCCACTG +
Preference number: 2 (lower is better)
Translates to: SDCDGSPCPSCGIVCKRGRQRLQ*AEIAPL
Trigger: CAGTGGGGCGATCTCAGCTCACTGCAACCTCTGCCT...CCCCCGCTTGCACACTATGCCACAGGAAGGGCAGGGGCTTCCATCACAATCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR GCA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACCTCCTGGTCCAAGGCTaGTTTGTACAGGCCCATCCT +
Preference number: 2 (lower is better)
Translates to: HHPSLGPSGFPASIKASHLLVQG*FVQAHP
Trigger: AGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAG...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp AAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAGGCACATGCGGCTGGCACCCTaGCCATCCCTCCCTGACCAC +
Preference number: 2 (lower is better)
Translates to: KLKARQKGTSTASSQLRHMRLAP*PSLPDH
Trigger: GTGGTCAGGGAGGGATGGGCAGGGTGCCAGCCGCAT...GTGCCTGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp GCGACAGGATGCTCAAGATCAGGCTCTGTAGCTGACAGCAGTGGCACAGGCCTCCTGTGTGGCCGTTGCTaGTCTCCTCACCACCCCTCA +
Preference number: 2 (lower is better)
Translates to: ATGCSRSGSVADSSGTGLLCGRC*SPHHPS
Trigger: TGAGGGGTGGTGAGGAGAGCAGCAACGGCCACACAG...GAGGCCTGTGCCACTGCTGTCAGCTACAGAGCCTGATCTTGAGCATCCTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CCA 90 bp CCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCACCAGTGCTGCCTCCATGCGGCTaGCACCCTGCCCATCCCTCC +
Preference number: 2 (lower is better)
Translates to: PLAYHPVLTSVTVRAPPVLPPCG*HPAHPS
Trigger: GGAGGGATGGGCAGGGTGCCAGCCGCATGGAGGCAG...CACTGGTGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CCA 90 bp AGTGATTGTGATGGAAGCCCCTGCCCTTCCTGTGGCATAGTGTGCAAGCGGGGGTCCCCTTGCCCCAGCTaGAACACGGGTGTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: SDCDGSPCPSCGIVCKRGSPCPS*NTGVSA
Trigger: AGCAGAGACACCCGTGTTCCAGCTGGGGCAAGGGGA...CCCCCGCTTGCACACTATGCCACAGGAAGGGCAGGGGCTTCCATCACAATCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CCA 90 bp AAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAGGCACCAGAGGGGCAGGCCCTaGCCTCGGTCTCCATGGGAA +
Preference number: 2 (lower is better)
Translates to: KLKARQKGTSTASSQLRHQRGRP*PRSPWE
Trigger: TTCCCATGGAGACCGAGGCCAGGGCCTGCCCCTCTG...GTGCCTGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp TCCGCCTCCCAGGTTCACGCCATTCTCCCGCCTCGGGAGCTGGGACAACAGGTGAGAACATTAGTAGCCTaGGTGGCAGGACAGGCAAGA +
Preference number: 2 (lower is better)
Translates to: SASQVHAILPPRELGQQVRTLVA*VAGQAR
Trigger: TCTTGCCTGTCCTGCCACCCAGGCTACTAATGTTCT...CACCTGTTGTCCCAGCTCCCGAGGCGGGAGAATGGCGTGAACCTGGGAGGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CCA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACGAGACGGCAGTAAGCTaGGATGAGGATGTGGGCACT +
Preference number: 2 (lower is better)
Translates to: HHPSLGPSGFPASIKASHETAVS*DEDVGT
Trigger: AGTGCCCACATCCTCATCCCAGCTTACTGCCGTCTC...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACAACCCTGCTGTGGAGTaGCAGGGTTTACTGAGCACA +
Preference number: 2 (lower is better)
Translates to: HHPSLGPSGFPASIKASHNPAVE*QGLLST
Trigger: TGTGCTCAGTAAACCCTGTCACTCCACAGCAGGGTT...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp AGGCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCACATGTTTCCAAAGCTTaGAGCCACAGCCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: RPWPRSPWEVSKFTGVGPHVSKA*SHSPAW
Trigger: CCAGGCTGGGCTGTGGCTTCAAGCTTTGGAAACATG...TGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643504.2
3UTR-3UTR GCA 90 bp AGGCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCAGCCAGTGTACCCACTTaGATCAGAACAGTCCGCCCA +
Preference number: 2 (lower is better)
Translates to: RPWPRSPWEVSKFTGVGPASVPT*IRTVRP
Trigger: TGGGCGGACTGTTCTGATGCAAGTGGGTACACTGGC...TGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp GGAGGAAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAGAACACGGGTGTCTCTaGTGCCTCCATGCGGCTGGC +
Preference number: 2 (lower is better)
Translates to: GGSSKRGRRGHQQRLPNSEHGCL*CLHAAG
Trigger: GCCAGCCGCATGGAGGCAGCAGAGACACCCGTGTTC...TGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp GCGACAGGATGCTCAAGATCAGGCTCTGTAGCTGACAGCAGTGGCACAGGCCTCGCAGGAGGATGGTGGTaGCATCTTTGGTGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: ATGCSRSGSVADSSGTGLAGGWW*HLWCLG
Trigger: ACCCAGGCACCAAAGATGGCACCACCATCCTCCTGC...GAGGCCTGTGCCACTGCTGTCAGCTACAGAGCCTGATCTTGAGCATCCTGTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CCA 90 bp CTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATATCTGCCTCCATGCGGCTaGCACCCTGCCCATCCCTCC +
Preference number: 2 (lower is better)
Translates to: LLVQGCFVQAHPCLQQQYLPPCG*HPAHPS
Trigger: GGAGGGATGGGCAGGGTGCCAGCCGCATGGAGGCAG...ATATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp CCTGAGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTACTGCCTCCATGCGGCTaGCACCCTGCCCATCCCTCC +
Preference number: 2 (lower is better)
Translates to: PEQSFSLQLPPSLLNSRLLPPCG*HPAHPS
Trigger: GGAGGGATGGGCAGGGTGCCAGCCGCATGGAGGCAG...TAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACGTACAAGCAGGAGGATaGTGGTGCCATCTTTGGTGC +
Preference number: 2 (lower is better)
Translates to: HHPSLGPSGFPASIKASHVQAGG*WCHLWC
Trigger: GCACCAAAGATGGCACCACCATCCTCCTGCTTGTAC...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp GCGACAGGATGCTCAAGATCAGGCTCTGTAGCTGACAGCAGTGGCACAGGCCTCCAAGTTCACAGGAGTTaGCCCAGGGAGCAGCACCCT +
Preference number: 2 (lower is better)
Translates to: ATGCSRSGSVADSSGTGLQVHRS*PREQHP
Trigger: AGGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTG...GAGGCCTGTGCCACTGCTGTCAGCTACAGAGCCTGATCTTGAGCATCCTGTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR TCA 90 bp CTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATATGGTACTGGAGGAGGGTaGGGCCACCAACAGCGCTGC +
Preference number: 2 (lower is better)
Translates to: LLVQGCFVQAHPCLQQQYGTGGG*GHQQRC
Trigger: GCAGCGCTGTTGGTGGCCTCACCCTCCTCCAGTACC...ATATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp GCGACAGGATGCTCAAGATCAGGCTCTGTAGCTGACAGCAGTGGCACAGGCCTCGGAACTCCCTTCTGGTaGCAGCTGGTCTTCCTAGAG +
Preference number: 2 (lower is better)
Translates to: ATGCSRSGSVADSSGTGLGTPFW*QLVFLE
Trigger: CTCTAGGAAGACCAGCTGTCACCAGAAGGGAGTTCC...GAGGCCTGTGCCACTGCTGTCAGCTACAGAGCCTGATCTTGAGCATCCTGTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR GCA 90 bp CCTGAGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTAATGCGGCTGGCACCCTaGCCATCCCTCCCTGACCAC +
Preference number: 2 (lower is better)
Translates to: PEQSFSLQLPPSLLNSRLMRLAP*PSLPDH
Trigger: GTGGTCAGGGAGGGATGGGCAGGGTGCCAGCCGCAT...TAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp GTGGCCCTGCTGACTCATGTTAGTCCTCCAGATTGTGCTGCTTCTGCCAGTGTAGAACACGGGTGTCTCTaGTGCCTCCATGCGGCTGGC +
Preference number: 2 (lower is better)
Translates to: VALLTHVSPPDCAASASVEHGCL*CLHAAG
Trigger: GCCAGCCGCATGGAGGCAGCAGAGACACCCGTGTTC...TACACTGGCAGAAGCAGCACAATCTGGAGGACTAACATGAGTCAGCAGGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp CCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTGGAACGCAGCAGCCATCCTaGTCTGCACCCACACAAGGT +
Preference number: 2 (lower is better)
Translates to: PVVQAGGWWCHLWCLGTGTQQPS*SAPTQG
Trigger: ACCTTGTGTGGGTGCAGAGCAGGATGGCTGCTGCGT...TCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp GCGACAGGATGCTCAAGATCAGGCTCTGTAGCTGACAGCAGTGGCACAGGCCTCCACTGCAGCAACCTCTaGCTCCCAGGTTCAAGCAAC +
Preference number: 2 (lower is better)
Translates to: ATGCSRSGSVADSSGTGLHCSNL*LPGSSN
Trigger: GTTGCTTGAACCTGGGAGGCAGAGGTTGCTGCAGTG...GAGGCCTGTGCCACTGCTGTCAGCTACAGAGCCTGATCTTGAGCATCCTGTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR GCA 90 bp AGTAGGGGCACAGACTTGTGCCTCGCTTCCCAGCAGCTGCCCAGTGCCTCTGTCGAGGGAACATCCATGTaGCACTTACGCAAGCACCTT +
Preference number: 2 (lower is better)
Translates to: SRGTDLCLASQQLPSASVEGTSM*HLRKHL
Trigger: AAGGTGCTTGCGTAAGTGGCACATGGATGTTCCCTC...GACAGAGGCACTGGGCAGCTGCTGGGAAGCGAGGCACAAGTCTGTGCCCCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CCA 90 bp AAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAGGCACAGAGCACCTGCAGCCTaGCACTCTCCTCAGGCAGTC +
Preference number: 2 (lower is better)
Translates to: KLKARQKGTSTASSQLRHRAPAA*HSPQAV
Trigger: GACTGCCTGAGGAGAGTGCCAGGCTGCAGGTGCTCT...GTGCCTGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp CTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATATCAGAGGGGCAGGCCCTaGCCTCGGTCTCCATGGGAA +
Preference number: 2 (lower is better)
Translates to: LLVQGCFVQAHPCLQQQYQRGRP*PRSPWE
Trigger: TTCCCATGGAGACCGAGGCCAGGGCCTGCCCCTCTG...ATATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp AGGCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCAATGCTAATGACTGCTTaGGGAGACCCAGGACTGAGG +
Preference number: 2 (lower is better)
Translates to: RPWPRSPWEVSKFTGVGPMLMTA*GDPGLR
Trigger: CCTCAGTCCTGGGTCTCCCCAAGCAGTCATTAGCAT...TGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp AGTGATTGTGATGGAAGCCCCTGCCCTTCCTGTGGCATAGTGTGCAAGCGGGGGGAATGCAGAGTACAGTaGAGTCTGAAGCCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: SDCDGSPCPSCGIVCKRGECRVQ*SLKPPG
Trigger: GCCAGGGGGCTTCAGACTCCACTGTACTCTGCATTC...CCCCCGCTTGCACACTATGCCACAGGAAGGGCAGGGGCTTCCATCACAATCACT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR CAA 90 bp GAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTaGTACAGGCCCATCCTTGCCTTCAACAGCAATATGGGCACCACT +
Preference number: 2 (lower is better)
Translates to: EAAEPWGFPSWSKAA*YRPILAFNSNMGTT
Trigger: AGTGGTGCCCATATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp GGAGGAAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCACCTCAGGCAGTCTTCTaGGACTCACCTCCCAAGTGC +
Preference number: 2 (lower is better)
Translates to: GGSSKRGRRGHQQRLPNSPQAVF*DSPPKC
Trigger: GCACTTGGGAGGTGAGTCTCAGAAGACTGCCTGAGG...TGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp GCAGAAAGAAAAGCTTCAGCCCCTACCAAGAGCACCTGCAGCCTGGCACTCTCCCTACTCTTTTCCAGCTaGGTGACCCTGGGCAGCCTT +
Preference number: 2 (lower is better)
Translates to: AERKASAPTKSTCSLALSLLFSS*VTLGSL
Trigger: AAGGCTGCCCAGGGTCACTCAGCTGGAAAAGAGTAG...GGAGAGTGCCAGGCTGCAGGTGCTCTTGGTAGGGGCTGAAGCTTTTCTTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp AAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAGGCACCCTACCAAGAGCACCTaGAGCCTGGCACTCTCCTCA +
Preference number: 2 (lower is better)
Translates to: KLKARQKGTSTASSQLRHPTKST*SLALSS
Trigger: TGAGGAGAGTGCCAGGCTGCAGGTGCTCTTGGTAGG...GTGCCTGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp AGCACCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCACCTCCTGTGGCATAGTGTaGAAGCGGGGGTGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: STFGLPSSPYFCDCKGPTSCGIV*KRGWGQ
Trigger: CTGACCCCACCCCCGCTTGCACACTATGCCACAGGA...GGTGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CCA 90 bp GTGGCCCTGCTGACTCATGTTAGTCCTCCAGATTGTGCTGCTTCTGCCAGTGTAAGAGCACCTGCAGCCTaGCACTCTCCTCAGGCAGTC +
Preference number: 2 (lower is better)
Translates to: VALLTHVSPPDCAASASVRAPAA*HSPQAV
Trigger: GACTGCCTGAGGAGAGTGCCAGGCTGCAGGTGCTCT...TACACTGGCAGAAGCAGCACAATCTGGAGGACTAACATGAGTCAGCAGGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp CCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCACCAGTGTCCCCTTGCCCCAGCTaGAACACGGGTGTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: PLAYHPVLTSVTVRAPPVSPCPS*NTGVSA
Trigger: AGCAGAGACACCCGTGTTCCAGCTGGGGCAAGGGGA...CACTGGTGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CCA 90 bp AGCACCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCACCGCCCATGTGCAGAGGTaGCCACGCCTAGTGGAACAG +
Preference number: 2 (lower is better)
Translates to: STFGLPSSPYFCDCKGPTAHVQR*PRLVEQ
Trigger: CTGTTCCACTAGGCGTGGCCACCTCTGCACATGGGC...GGTGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CCA 90 bp AGGCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCATGGCATGGGATTCACTaGTGGCCTATCAAGAACCCT +
Preference number: 2 (lower is better)
Translates to: RPWPRSPWEVSKFTGVGPWHGIH*WPIKNP
Trigger: AGGGTTCTTGATAGGCCACCAGTGAATCCCATGCCA...TGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp AGTGATTGTGATGGAAGCCCCTGCCCTTCCTGTGGCATAGTGTGCAAGCGGGGGCTCACTAGGACCGAGTaGCTTCCCAGCTTCCATCAA +
Preference number: 2 (lower is better)
Translates to: SDCDGSPCPSCGIVCKRGLTRTE*LPSFHQ
Trigger: TTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAG...CCCCCGCTTGCACACTATGCCACAGGAAGGGCAGGGGCTTCCATCACAATCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR CAA 90 bp AGCAGACTTGTTTGTGCTTTGGGGGAACTCTCTTCTCAGCTCCCTTaGCCAGTCCCAAGCCTGGTGGATCTGCATCTCACGCCCACTGCA +
Preference number: 2 (lower is better)
Translates to: SRLVCALGELSSQLP*PVPSLVDLHLTPTA
Trigger: TGCAGTGGGCGTGAGATGCAGATCCACCAGGCTTGGGACTGGCAAAGGGAGCTGAGAAGAGAGTTCCCCCAAAGCACAAACAAGTCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR TCA 90 bp GGAGGAAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAGGCAGGAGAATTGCTTaGGCCTGGAAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: GGSSKRGRRGHQQRLPNSGRRIA*AWKAEV
Trigger: AACCTCTGCCTTCCAGGCTCAAGCAATTCTCCTGCC...TGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp GGGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTAAAGTAACGTGGAACTaGCCTTCCAAAAACTGCTTG +
Preference number: 2 (lower is better)
Translates to: GSREAAEPWGFPSWSKAAKVTWN*PSKNCL
Trigger: CAAGCAGTTTTTGGAAGGGCAGTTCCACGTTACTTT...AGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp AGGCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCAAGATTGTGCTGCTTCTaGCAGTGTACCCACTTGCAT +
Preference number: 2 (lower is better)
Translates to: RPWPRSPWEVSKFTGVGPRLCCF*QCTHLH
Trigger: ATGCAAGTGGGTACACTGGCAGAAGCAGCACAATCT...TGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp GGCTGTGAAATGAATGCCAGATTCGGTGGCATGGGATTCACTGGTGGCCTATCAGGGAACAGCAAGGGCTaGATGGTGACCCACGTCGAG +
Preference number: 2 (lower is better)
Translates to: GCEMNARFGGMGFTGGLSGNSKG*MVTHVE
Trigger: CTCGACGTGGGTCACCATGCAGCCCTTGCTGTTCCC...TGATAGGCCACCAGTGAATCCCATGCCACCGAATCTGGCATTCATTTCACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp GCGACAGGATGCTCAAGATCAGGCTCTGTAGCTGACAGCAGTGGCACAGGCCTCGAGGGAACATCCATGTaGCACTTACGCAAGCACCTT +
Preference number: 2 (lower is better)
Translates to: ATGCSRSGSVADSSGTGLEGTSM*HLRKHL
Trigger: AAGGTGCTTGCGTAAGTGGCACATGGATGTTCCCTC...GAGGCCTGTGCCACTGCTGTCAGCTACAGAGCCTGATCTTGAGCATCCTGTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CCA 90 bp TCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCAGGGAGCAGCACCCTGCCACAGATCCCATTGTaGAAGGTTTCAGGAACCCCT +
Preference number: 2 (lower is better)
Translates to: SPWEVSKFTGVGPGSSTLPQIPL*KVSGTP
Trigger: AGGGGTTCCTGAAACCTTCCACAATGGGATCTGTGG...CAGGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp CTGGAGCTCAGAGGTAAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTAGAGCACCTGCAGCCTaGCACTCTCCTCAGGCAGTC +
Preference number: 2 (lower is better)
Translates to: LELRGKGWLKCSLEISQGRAPAA*HSPQAV
Trigger: GACTGCCTGAGGAGAGTGCCAGGCTGCAGGTGCTCT...ACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTTACCTCTGAGCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp GCAGAAAGAAAAGCTTCAGCCCCTACCAAGAGCACCTGCAGCCTGGCACTCTCCTGGCCTCGGTCTCCATaGGAAGTGAGCAAGTTCACA +
Preference number: 2 (lower is better)
Translates to: AERKASAPTKSTCSLALSWPRSP*EVSKFT
Trigger: TGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCA...GGAGAGTGCCAGGCTGCAGGTGCTCTTGGTAGGGGCTGAAGCTTTTCTTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp GCGACAGGATGCTCAAGATCAGGCTCTGTAGCTGACAGCAGTGGCACAGGCCTCCATGGGATTCACTGGTaGCCTATCAAGAACCCTGCT +
Preference number: 2 (lower is better)
Translates to: ATGCSRSGSVADSSGTGLHGIHW*PIKNPA
Trigger: AGCAGGGTTCTTGATAGGCCACCAGTGAATCCCATG...GAGGCCTGTGCCACTGCTGTCAGCTACAGAGCCTGATCTTGAGCATCCTGTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CCA 90 bp CCTGAGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTACCTTCCTTTCTCACCTaGACCACGGTCACAGCCCCC +
Preference number: 2 (lower is better)
Translates to: PEQSFSLQLPPSLLNSRLPSFLT*TTVTAP
Trigger: GGGGGCTGTGACCGTGGTCCAGGTGAGAAAGGAAGG...TAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp AAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAGGCACGGTCTCCATGGGAAGTaGGCAAGTTCACAGGAGTTG +
Preference number: 2 (lower is better)
Translates to: KLKARQKGTSTASSQLRHGLHGK*ASSQEL
Trigger: CAACTCCTGTGAACTTGCTCACTTCCCATGGAGACC...GTGCCTGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp AAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGACTGCGCAAGGGCTGCATGGTaGCCCACGTCGAGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: KGWLKCSLEISQGDANDCARAAW*PTSSSG
Trigger: TCCACTGCTCGACGTGGGTCACCATGCAGCCCTTGC...GCAGTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp ACTCTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCACTGTGACCGTCCATTaGATCCGACTGAGTCAATGT +
Preference number: 2 (lower is better)
Translates to: TLQGTKLPSTQQPSCSAPTVTVH*IRLSQC
Trigger: ACATTGACTCAGTCGGATTCAATGGACGGTCACAGT...GGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643504.2
3UTR-3UTR GCA 90 bp CCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTGGAGTACAGGCCCATCCTTaGCTTCAACAGCAATATGGG +
Preference number: 2 (lower is better)
Translates to: PVVQAGGWWCHLWCLGTGVQAHP*LQQQYG
Trigger: CCCATATTGCTGTTGAAGGCAAGGATGGGCCTGTAC...TCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp GGCTGTGAAATGAATGCCAGATTCGGTGGCATGGGATTCACTGGTGGCCTATCACTGGAAGGCAGAGGTTaGAGTGAGCTGAGATCGCCC +
Preference number: 2 (lower is better)
Translates to: GCEMNARFGGMGFTGGLSLEGRG*SELRSP
Trigger: GGGCGATCTCAGCTCACTGCAACCTCTGCCTTCCAG...TGATAGGCCACCAGTGAATCCCATGCCACCGAATCTGGCATTCATTTCACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACACAGAGATCAACAAATaGAGAGAGAAGGCAGTGTCT +
Preference number: 2 (lower is better)
Translates to: HHPSLGPSGFPASIKASHTEINK*REKAVS
Trigger: AGACACTGCCTTCTCTCTGCATTTGTTGATCTCTGT...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp GGAGGAAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCATGGGGTTTTCCCTCCTaGTCCAAGGCTGCTTTGTAC +
Preference number: 2 (lower is better)
Translates to: GGSSKRGRRGHQQRLPNSWGFPS*SKAALY
Trigger: GTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCA...TGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp AAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGACTGCCACCAACAGCGCTGCTaGCAGCAGAGGAGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: KGWLKCSLEISQGDANDCHQQRC*QQRRAE
Trigger: CTCTGCCCTCCTCTGCTGCCAGCAGCGCTGTTGGTG...GCAGTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp TTCCTCCGTCACTGCTCAACTCTCGGTTATTTTTCTCACCCTACCTTAGAACTCCAGAGGGGCAGGCCCTaGCCTCGGTCTCCATGGGAA +
Preference number: 2 (lower is better)
Translates to: FLRHCSTLGYFSHPTLELQRGRP*PRSPWE
Trigger: TTCCCATGGAGACCGAGGCCAGGGCCTGCCCCTCTG...GAGTTCTAAGGTAGGGTGAGAAAAATAACCGAGAGTTGAGCAGTGACGGAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp AGCCACGATCTTGCAACCAATTGTGGGCAACCTCAATTCAGATGCCTAGAGAGCGCAGTGTCTCGGGGCTaGAGCTCAGAGGTAAGGGGT +
Preference number: 2 (lower is better)
Translates to: SHDLATNCGQPQFRCLESAVSRG*SSEVRG
Trigger: ACCCCTTACCTCTGAGCTCCAGCCCCGAGACACTGC...GCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp GGTTTCAGGAACCCCTCCCCAGGTAATGATCACGGGATCTTCAACAGCTCAAGGAGCCACAGCCCAGCCTaGCAGTCCAAACCTCTCATA +
Preference number: 2 (lower is better)
Translates to: GFRNPSPGNDHGIFNSSRSHSPA*QSKPLI
Trigger: TATGAGAGGTTTGGACTGCCAGGCTGGGCTGTGGCT...CCTTGAGCTGTTGAAGATCCCGTGATCATTACCTGGGGAGGGGTTCCTGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
3UTR CAA 90 bp AGAGAAGGCAGTGTCTCGGGGCTGGAGCTCAGAGGTAAGGGGTGGTaGAAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGACTGC +
Preference number: 2 (lower is better)
Translates to: REGSVSGLELRGKGW*KCSLEISQGDANDC
Trigger: GCAGTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTTACCTCTGAGCTCCAGCCCCGAGACACTGCCTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CAA 90 bp GTCCTTACTTCTGTGACTGTAAGGGCCCCACCAGTGTCAGCAGACTaGTTTGTGCTTTGGGGGAACTCTCTTCTCAGCTCCCTTTGCCAG +
Preference number: 2 (lower is better)
Translates to: VLTSVTVRAPPVSAD*FVLWGNSLLSSLCQ
Trigger: CTGGCAAAGGGAGCTGAGAAGAGAGTTCCCCCAAAGCACAAACAAGTCTGCTGACACTGGTGGGGCCCTTACAGTCACAGAAGTAAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR TCA 90 bp GGCTGTGAAATGAATGCCAGATTCGGTGGCATGGGATTCACTGGTGGCCTATCACTACTCTTTTCCAGCTaGGTGACCCTGGGCAGCCTT +
Preference number: 2 (lower is better)
Translates to: GCEMNARFGGMGFTGGLSLLFSS*VTLGSL
Trigger: AAGGCTGCCCAGGGTCACTCAGCTGGAAAAGAGTAG...TGATAGGCCACCAGTGAATCCCATGCCACCGAATCTGGCATTCATTTCACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp GGAGGAAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAAGACAGTCCCGGGTTTaGGTCCAGCTCTACTCTTTT +
Preference number: 2 (lower is better)
Translates to: GGSSKRGRRGHQQRLPNSRQSRV*VQLYSF
Trigger: AAAAGAGTAGAGCTGGACTCAAACCCGGGACTGTCT...TGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp TGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAATGAGCCCAGGTGCCCTCAGGCAGAGGTTGCAGTaGGCTGAGATCGCCCCACTG +
Preference number: 2 (lower is better)
Translates to: CLFGVSKSRSPQMSPGALRQRLQ*AEIAPL
Trigger: CAGTGGGGCGATCTCAGCTCACTGCAACCTCTGCCT...GAGGGCACCTGGGCTCATTTGTGGACTACGTGATTTTGAGACTCCAAATAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp CTGGAGCTCAGAGGTAAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGGCAGGAGAATTGCTTaGGCCTGGAAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: LELRGKGWLKCSLEISQGGRRIA*AWKAEV
Trigger: AACCTCTGCCTTCCAGGCTCAAGCAATTCTCCTGCC...ACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTTACCTCTGAGCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp GGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTCTCAGATATAAAAGGTaGATTCTCTCCTTGGGAAAG +
Preference number: 2 (lower is better)
Translates to: GAGRLQSLGVFPPGPRLLLRYKR*ILSLGK
Trigger: CTTTCCCAAGGAGAGAATGCACCTTTTATATCTGAG...AAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTCAGGCCACACCACCCTaGAAAGAGTTGCCCCCACCC +
Preference number: 2 (lower is better)
Translates to: THEIPLALPTYMHIILSSQATPP*KELPPP
Trigger: GGGTGGGGGCAACTCTTTGCAGGGTGGTGTGGCCTG...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp TCCGCCTCCCAGGTTCACGCCATTCTCCCGCCTCGGGAGCTGGGACAACAGGTGACATGTCCAGATTCATaGCTAAATATCCAGTTGATA +
Preference number: 2 (lower is better)
Translates to: SASQVHAILPPRELGQQVTCPDS*LNIQLI
Trigger: TATCAACTGGATATTTAGGCATGAATCTGGACATGT...CACCTGTTGTCCCAGCTCCCGAGGCGGGAGAATGGCGTGAACCTGGGAGGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CCA 90 bp AGCCACGATCTTGCAACCAATTGTGGGCAACCTCAATTCAGATGCCTAGAGAGCCAAGTTCACAGGAGTTaGCCCAGGGAGCAGCACCCT +
Preference number: 2 (lower is better)
Translates to: SHDLATNCGQPQFRCLESQVHRS*PREQHP
Trigger: AGGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTG...GCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp GCGACAGGATGCTCAAGATCAGGCTCTGTAGCTGACAGCAGTGGCACAGGCCTCGAGAACAGAGAATCCTaGAATGCAGAGTACAGTGGA +
Preference number: 2 (lower is better)
Translates to: ATGCSRSGSVADSSGTGLENRES*NAEYSG
Trigger: TCCACTGTACTCTGCATTCCAGGATTCTCTGTTCTC...GAGGCCTGTGCCACTGCTGTCAGCTACAGAGCCTGATCTTGAGCATCCTGTCGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR CAA 90 bp TGGCTTCCCAGCTTCCATCAAGGCCAGCCACGATCTTGCAACCAATaGTGGGCAACCTCAATTCAGATGCCTAGAGAGCTCCTCTTCTCA +
Preference number: 2 (lower is better)
Translates to: WLPSFHQGQPRSCNQ*WATSIQMPRELLFS
Trigger: TGAGAAGAGGAGCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCTGGCCTTGATGGAAGCTGGGAAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp AAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGACTGCTGCACTCCACCTGGGTaGCACAGCGAGACTGTCTCA +
Preference number: 2 (lower is better)
Translates to: KGWLKCSLEISQGDANDCCTPPG*HSETVS
Trigger: TGAGACAGTCTCGCTGTGTCACCCAGGTGGAGTGCA...GCAGTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp TCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCAGGGAGCAGCACCCTGAAAGTAACGTGGAACTaGCCTTCCAAAAACTGCTTG +
Preference number: 2 (lower is better)
Translates to: SPWEVSKFTGVGPGSSTLKVTWN*PSKNCL
Trigger: CAAGCAGTTTTTGGAAGGGCAGTTCCACGTTACTTT...CAGGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp GCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCTACCCAAGGAAATTCTaGCAAGAAAAGAAGCCCTGT +
Preference number: 2 (lower is better)
Translates to: AEPWGFPSWSKAALYRPIYPRKF*QEKKPC
Trigger: ACAGGGCTTCTTTTCTTGGCAGAATTTCCTTGGGTA...GATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp CCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCATATCAGTTCCCCTTaGCCCAGCTGGAACACGGGT +
Preference number: 2 (lower is better)
Translates to: PPCFAHLHAYHSQLCISNHISSP*PSWNTG
Trigger: ACCCGTGTTCCAGCTGGGGCAAGGGGAACTGATATG...GTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp TGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAATGAGCCCAGGTGCCCTCACGCAGCAGCCATCCTaGTCTGCACCCACACAAGGT +
Preference number: 2 (lower is better)
Translates to: CLFGVSKSRSPQMSPGALTQQPS*SAPTQG
Trigger: ACCTTGTGTGGGTGCAGAGCAGGATGGCTGCTGCGT...GAGGGCACCTGGGCTCATTTGTGGACTACGTGATTTTGAGACTCCAAATAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp AGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTATTTTGGGAACAGCAAGGGCTaGATGGTGACCCACGTCGAG +
Preference number: 2 (lower is better)
Translates to: SSRFLCSFLRHCSTLGYFGNSKG*MVTHVE
Trigger: CTCGACGTGGGTCACCATGCAGCCCTTGCTGTTCCC...AAAATAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp AGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTATTTTTTCCTGTGTGGCCGTTaGTGCTCTCCTCACCACCCC +
Preference number: 2 (lower is better)
Translates to: SSRFLCSFLRHCSTLGYFFLCGR*CSPHHP
Trigger: GGGGTGGTGAGGAGAGCAGCAACGGCCACACAGGAA...AAAATAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp CCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCATAATCCAAAGCATATaGCAAAAGCCGCATGGCGAT +
Preference number: 2 (lower is better)
Translates to: PWGFPSWSKAALYRPILAIIQSI*QKPHGD
Trigger: ATCGCCATGCGGCTTTTGGCATATGCTTTGGATTAT...GGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643504.2
3UTR-3UTR CCA 90 bp CACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCCAAATACCCAGTGCAGAGCACCTGCAGCCTaGCACTCTCCTCAGGCAGTC +
Preference number: 2 (lower is better)
Translates to: HLHAYHSQLCISNPNTQCRAPAA*HSPQAV
Trigger: GACTGCCTGAGGAGAGTGCCAGGCTGCAGGTGCTCT...GCACTGGGTATTTGGGTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp GGCTGTGAAATGAATGCCAGATTCGGTGGCATGGGATTCACTGGTGGCCTATCATGGCCTCGGTCTCCATaGGAAGTGAGCAAGTTCACA +
Preference number: 2 (lower is better)
Translates to: GCEMNARFGGMGFTGGLSWPRSP*EVSKFT
Trigger: TGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCA...TGATAGGCCACCAGTGAATCCCATGCCACCGAATCTGGCATTCATTTCACAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp CACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCCAAATACCCAGTGCGGATCACCTGGGGTCTaGAGTTCGAGACCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: HLHAYHSQLCISNPNTQCGSPGV*SSRPAW
Trigger: CCAGGCTGGTCTCGAACTCCAGACCCCAGGTGATCC...GCACTGGGTATTTGGGTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp CCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACGAGACGGCAGTAAGCTaGGATGAGGATGTGGGCACT +
Preference number: 2 (lower is better)
Translates to: PPCFAHLHAYHSQLCISNETAVS*DEDVGT
Trigger: AGTGCCCACATCCTCATCCCAGCTTACTGCCGTCTC...GTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp TCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCAGGGAGCAGCACCCTGCTAGTTTATCCACTTTaGTGCTATCTCCACGAGATG +
Preference number: 2 (lower is better)
Translates to: SPWEVSKFTGVGPGSSTLLVYPL*CYLHEM
Trigger: CATCTCGTGGAGATAGCACCAAAGTGGATAAACTAG...CAGGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643504.2
3UTR CAA 90 bp GGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTaGCCTTCAACAGCAATATGGGCACCACTTAAGACCTCAGATATA +
Preference number: 2 (lower is better)
Translates to: GVFPPGPRLLCTGPS*PSTAIWAPLKTSDI
Trigger: TATATCTGAGGTCTTAAGTGGTGCCCATATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp AAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGACTGCAAACCAGATTCTCCCTaGTCCCCTGAGGGGGTGTCA +
Preference number: 2 (lower is better)
Translates to: KGWLKCSLEISQGDANDCKPDSP*SPEGVS
Trigger: TGACACCCCCTCAGGGGATCAGGGAGAATCTGGTTT...GCAGTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp TCTGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGGTACTGGAGGAGGGTaGGGCCACCAACAGCGCTGC +
Preference number: 2 (lower is better)
Translates to: SVSPTQIPSAYLESQNHVGTGGG*GHQQRC
Trigger: GCAGCGCTGTTGGTGGCCTCACCCTCCTCCAGTACC...TACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp TGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAATGAGCCCAGGTGCCCTCTCTTTTCCAGCTGAGTaGCCCTGGGCAGCCTTACTC +
Preference number: 2 (lower is better)
Translates to: CLFGVSKSRSPQMSPGALSFPAE*PWAALL
Trigger: GAGTAAGGCTGCCCAGGGTCACTCAGCTGGAAAAGA...GAGGGCACCTGGGCTCATTTGTGGACTACGTGATTTTGAGACTCCAAATAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp CCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCACCAGTGGCACAAGGTGGAACATaGGGGAATGGACTAGTTTCT +
Preference number: 2 (lower is better)
Translates to: PLAYHPVLTSVTVRAPPVAQGGT*GNGLVS
Trigger: AGAAACTAGTCCATTCCCTCATGTTCCACCTTGTGC...CACTGGTGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR TCA 90 bp TTGAACAGAGGGAACATCCATGTGCCACTTACGCAAGCACCTTCAGCAAGACTTGCAAGAGGGCTCTGCTaGGTGAGAACTGAGATGAGG +
Preference number: 2 (lower is better)
Translates to: LNRGNIHVPLTQAPSARLARGLC*VRTEMR
Trigger: CCTCATCTCAGTTCTCACTCAGCAGAGCCCTCTTGC...AAGTCTTGCTGAAGGTGCTTGCGTAAGTGGCACATGGATGTTCCCTCTGTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR TCA 90 bp GGAGGAAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAACTGTCAGCAGAGAATaGACCAGAACATTAGTAGCC +
Preference number: 2 (lower is better)
Translates to: GGSSKRGRRGHQQRLPNSTVSRE*TRTLVA
Trigger: GGCTACTAATGTTCTGGTTCATTCTCTGCTGACAGT...TGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp GTCCGCCCACTACCCAAGGAAATTCTGCCAAGAAAAGAAGCCCTGTCTCTCCAGAGCAAATCCTCACACTaGCTGGACATGTGCCACTTT +
Preference number: 2 (lower is better)
Translates to: VRPLPKEILPRKEALSLQSKSSH*LDMCHF
Trigger: AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCT...CTGGAGAGACAGGGCTTCTTTTCTTGGCAGAATTTCCTTGGGTAGTGGGCGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp CCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTGGAAAAGTAACGTGGAACTaGCCTTCCAAAAACTGCTTG +
Preference number: 2 (lower is better)
Translates to: PVVQAGGWWCHLWCLGTGKVTWN*PSKNCL
Trigger: CAAGCAGTTTTTGGAAGGGCAGTTCCACGTTACTTT...TCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp CACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCCAAATACCCAGTGCGCAGCCATCCTGCTCTaGACCCACACAAGGTCCCAA +
Preference number: 2 (lower is better)
Translates to: HLHAYHSQLCISNPNTQCAAILL*THTRSQ
Trigger: TTGGGACCTTGTGTGGGTGCAGAGCAGGATGGCTGC...GCACTGGGTATTTGGGTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp CTGGAGCTCAGAGGTAAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGGATGTGGGCACTGCTaGACAGAGATCAACAAATGC +
Preference number: 2 (lower is better)
Translates to: LELRGKGWLKCSLEISQGGCGHC*TEINKC
Trigger: GCATTTGTTGATCTCTGTGCAGCAGTGCCCACATCC...ACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTTACCTCTGAGCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp AGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTATTTTTCACCCAGGCTGGAGTaGAGTGCAGCAATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: SSRFLCSFLRHCSTLGYFSPRLE*SAAISA
Trigger: AGCCGAGATTGCTGCACTGCACTCCAGCCTGGGTGA...AAAATAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
3UTR-3UTR GCA 90 bp AGTAGGGGCACAGACTTGTGCCTCGCTTCCCAGCAGCTGCCCAGTGCCTCTGTCACATGTCCAGATTCATaGCTAAATATCCAGTTGATA +
Preference number: 2 (lower is better)
Translates to: SRGTDLCLASQQLPSASVTCPDS*LNIQLI
Trigger: TATCAACTGGATATTTAGGCATGAATCTGGACATGT...GACAGAGGCACTGGGCAGCTGCTGGGAAGCGAGGCACAAGTCTGTGCCCCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CCA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTCAAGTTCACAGGAGTTaGCCCAGGGAGCAGCACCCT +
Preference number: 2 (lower is better)
Translates to: THEIPLALPTYMHIILSSQVHRS*PREQHP
Trigger: AGGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTG...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp CCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTTTCTGTTAAATTGTaGGAACAGCAAGGGCTGCAT +
Preference number: 2 (lower is better)
Translates to: PWGFPSWSKAALYRPILAFSVKL*EQQGLH
Trigger: ATGCAGCCCTTGCTGTTCCCACAATTTAACAGAAAA...GGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp GCGACAGGATGCTCAAGATCAGGCTCTGTAGCTGACAGCAGTGGCACAGGCCTCACCTTCAGCAAGACTTaGAAACTCAAGGTGAGTAAT +
Preference number: 2 (lower is better)
Translates to: ATGCSRSGSVADSSGTGLTFSKT*KLKVSN
Trigger: ATTACTCACCTTGAGTTTCCAAGTCTTGCTGAAGGT...GAGGCCTGTGCCACTGCTGTCAGCTACAGAGCCTGATCTTGAGCATCCTGTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR CAA 90 bp AGTGTTAGGAACTCCCTTCTGGTGACAGCTGGTCTTCCTAGAGTGTaGCTGGTAACTATCGCCTCTTGGTCTTCTGACATCATTGCCAGG +
Preference number: 2 (lower is better)
Translates to: SVRNSLLVTAGLPRV*LVTIASWSSDIIAR
Trigger: CCTGGCAATGATGTCAGAAGACCAAGAGGCGATAGTTACCAGCAACACTCTAGGAAGACCAGCTGTCACCAGAAGGGAGTTCCTAACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR TCA 90 bp GTCCGCCCACTACCCAAGGAAATTCTGCCAAGAAAAGAAGCCCTGTCTCTCCAGACAAAACCAGTCAACTaGACACAGAGCAGCTCTCTT +
Preference number: 2 (lower is better)
Translates to: VRPLPKEILPRKEALSLQTKPVN*TQSSSL
Trigger: AAGAGAGCTGCTCTGTGTTCAGTTGACTGGTTTTGT...CTGGAGAGACAGGGCTTCTTTTCTTGGCAGAATTTCCTTGGGTAGTGGGCGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp AGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTATTTTAAACCAGATTCTCCCTaGTCCCCTGAGGGGGTGTCA +
Preference number: 2 (lower is better)
Translates to: SSRFLCSFLRHCSTLGYFKPDSP*SPEGVS
Trigger: TGACACCCCCTCAGGGGATCAGGGAGAATCTGGTTT...AAAATAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTTCTTTTCCAGCTGAGTaGCCCTGGGCAGCCTTACTC +
Preference number: 2 (lower is better)
Translates to: THEIPLALPTYMHIILSSSFPAE*PWAALL
Trigger: GAGTAAGGCTGCCCAGGGTCACTCAGCTGGAAAAGA...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp TGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAATGAGCCCAGGTGCCCTCAACCCTGCTGTGGAGTaGCAGGGTTTACTGAGCACA +
Preference number: 2 (lower is better)
Translates to: CLFGVSKSRSPQMSPGALNPAVE*QGLLST
Trigger: TGTGCTCAGTAAACCCTGTCACTCCACAGCAGGGTT...GAGGGCACCTGGGCTCATTTGTGGACTACGTGATTTTGAGACTCCAAATAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTGCAAGAGGGCTCTGCTaGGTGAGAACTGAGATGAGG +
Preference number: 2 (lower is better)
Translates to: THEIPLALPTYMHIILSSARGLC*VRTEMR
Trigger: CCTCATCTCAGTTCTCACTCAGCAGAGCCCTCTTGC...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp TCCAGATTGTGCTGCTTCTGCCAGTGTACCCACTTGCATCAGAACAGTCCGCCCTACCCAAGGAAATTCTaGCAAGAAAAGAAGCCCTGT +
Preference number: 2 (lower is better)
Translates to: SRLCCFCQCTHLHQNSPPYPRKF*QEKKPC
Trigger: ACAGGGCTTCTTTTCTTGGCAGAATTTCCTTGGGTA...GGGCGGACTGTTCTGATGCAAGTGGGTACACTGGCAGAAGCAGCACAATCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp CACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCCAAATACCCAGTGCCTCCTGGTCCAAGGCTaGTTTGTACAGGCCCATCCT +
Preference number: 2 (lower is better)
Translates to: HLHAYHSQLCISNPNTQCLLVQG*FVQAHP
Trigger: AGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAG...GCACTGGGTATTTGGGTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp AGCACCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCACCAGCTTCCTCCGTCACTaGTCAACTCTCGGTTATTTT +
Preference number: 2 (lower is better)
Translates to: STFGLPSSPYFCDCKGPTSFLRH*STLGYF
Trigger: AAAATAACCGAGAGTTGAGCAGTGACGGAGGAAGCT...GGTGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR GCA 90 bp CACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCCAAATACCCAGTGCTCCTTCAGCTCGAGGTaGACGTCCCGAATGCCTGTA +
Preference number: 2 (lower is better)
Translates to: HLHAYHSQLCISNPNTQCSFSSR*TSRMPV
Trigger: TACAGGCATTCGGGACGTGCACCTCGAGCTGAAGGA...GCACTGGGTATTTGGGTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643504.2
3UTR-3UTR CCA 90 bp ATTTTTCTGATTGACTTTCTATCTGCGACAGGATGCTCAAGATCAGGCTCTGTACACCAACAGCGCTGCTaGCAGCAGAGGAGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: IFLIDFLSATGCSRSGSVHQQRC*QQRRAE
Trigger: CTCTGCCCTCCTCTGCTGCCAGCAGCGCTGTTGGTG...TACAGAGCCTGATCTTGAGCATCCTGTCGCAGATAGAAAGTCAATCAGAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CCA 90 bp TTCCTCCGTCACTGCTCAACTCTCGGTTATTTTTCTCACCCTACCTTAGAACTCTGGTGGTGCCATCTTTaGTGCCTGGGTACTGGAGGA +
Preference number: 2 (lower is better)
Translates to: FLRHCSTLGYFSHPTLELWWCHL*CLGTGG
Trigger: TCCTCCAGTACCCAGGCACCAAAGATGGCACCACCA...GAGTTCTAAGGTAGGGTGAGAAAAATAACCGAGAGTTGAGCAGTGACGGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp AGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTATTTTCAAGCAGGAGGATGGTaGTGCCATCTTTGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: SSRFLCSFLRHCSTLGYFQAGGW*CHLWCL
Trigger: CAGGCACCAAAGATGGCACCACCATCCTCCTGCTTG...AAAATAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp TGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAATGAGCCCAGGTGCCCTCGTACAAGCAGGAGGATaGTGGTGCCATCTTTGGTGC +
Preference number: 2 (lower is better)
Translates to: CLFGVSKSRSPQMSPGALVQAGG*WCHLWC
Trigger: GCACCAAAGATGGCACCACCATCCTCCTGCTTGTAC...GAGGGCACCTGGGCTCATTTGTGGACTACGTGATTTTGAGACTCCAAATAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp CCACTTAAGACCTCAGATATAAAAGGTGCATTCTCTCCTTGGGAAAGGCTTTTGCCTCAGGCAGTCTTCTaGGACTCACCTCCCAAGTGC +
Preference number: 2 (lower is better)
Translates to: PLKTSDIKGAFSPWERLLPQAVF*DSPPKC
Trigger: GCACTTGGGAGGTGAGTCTCAGAAGACTGCCTGAGG...CAAAAGCCTTTCCCAAGGAGAGAATGCACCTTTTATATCTGAGGTCTTAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp CACAGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGCCTCAGGCAGTCTTCTaGGACTCACCTCCCAAGTGC +
Preference number: 2 (lower is better)
Translates to: HRLNANQSNAQMIAKTILPQAVF*DSPPKC
Trigger: GCACTTGGGAGGTGAGTCTCAGAAGACTGCCTGAGG...CAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp AGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTATTTTAACCCTGCTGTGGAGTaGCAGGGTTTACTGAGCACA +
Preference number: 2 (lower is better)
Translates to: SSRFLCSFLRHCSTLGYFNPAVE*QGLLST
Trigger: TGTGCTCAGTAAACCCTGTCACTCCACAGCAGGGTT...AAAATAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp TCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAATGCACTCCACCTGGGTaGCACAGCGAGACTGTCTCA +
Preference number: 2 (lower is better)
Translates to: SNPNTQCLFGVSKSRSPQCTPPG*HSETVS
Trigger: TGAGACAGTCTCGCTGTGTCACCCAGGTGGAGTGCA...TTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp TCTGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAAGGCAGAGGTTGCAGTaGGCTGAGATCGCCCCACTG +
Preference number: 2 (lower is better)
Translates to: SVSPTQIPSAYLESQNHVRQRLQ*AEIAPL
Trigger: CAGTGGGGCGATCTCAGCTCACTGCAACCTCTGCCT...TACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp TCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAACCTACCAAGAGCACCTaGAGCCTGGCACTCTCCTCA +
Preference number: 2 (lower is better)
Translates to: SNPNTQCLFGVSKSRSPQPTKST*SLALSS
Trigger: TGAGGAGAGTGCCAGGCTGCAGGTGCTCTTGGTAGG...TTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp GGAGGAAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCACTCAGATATAAAAGGTaGATTCTCTCCTTGGGAAAG +
Preference number: 2 (lower is better)
Translates to: GGSSKRGRRGHQQRLPNSLRYKR*ILSLGK
Trigger: CTTTCCCAAGGAGAGAATGCACCTTTTATATCTGAG...TGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp TGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAATGAGCCCAGGTGCCCTCCCCATATTTCCTAAGTaGCAAGGCCCATGTGCAGAG +
Preference number: 2 (lower is better)
Translates to: CLFGVSKSRSPQMSPGALPIFPK*QGPCAE
Trigger: CTCTGCACATGGGCCTTGGCACTTAGGAAATATGGG...GAGGGCACCTGGGCTCATTTGTGGACTACGTGATTTTGAGACTCCAAATAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp AAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGACTGCCCCATATTTCCTAAGTaGCAAGGCCCATGTGCAGAG +
Preference number: 2 (lower is better)
Translates to: KGWLKCSLEISQGDANDCPIFPK*QGPCAE
Trigger: CTCTGCACATGGGCCTTGGCACTTAGGAAATATGGG...GCAGTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp AGCCACGATCTTGCAACCAATTGTGGGCAACCTCAATTCAGATGCCTAGAGAGCCTGTCTCAAAAACCCTaGTGTGGAGTGACAGGGTTT +
Preference number: 2 (lower is better)
Translates to: SHDLATNCGQPQFRCLESLSQKP*CGVTGF
Trigger: AAACCCTGTCACTCCACAGCAGGGTTTTTGAGACAG...GCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp TGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTTTCCTGTGTGGCCGTTaGTGCTCTCCTCACCACCCC +
Preference number: 2 (lower is better)
Translates to: CISNPNTQCLFGVSKSRSFLCGR*CSPHHP
Trigger: GGGGTGGTGAGGAGAGCAGCAACGGCCACACAGGAA...ACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp CACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCCAAATACCCAGTGCTGGGGTTTTCCCTCCTaGTCCAAGGCTGCTTTGTAC +
Preference number: 2 (lower is better)
Translates to: HLHAYHSQLCISNPNTQCWGFPS*SKAALY
Trigger: GTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCA...GCACTGGGTATTTGGGTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp TCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAACAAGTTCACAGGAGTTaGCCCAGGGAGCAGCACCCT +
Preference number: 2 (lower is better)
Translates to: SNPNTQCLFGVSKSRSPQQVHRS*PREQHP
Trigger: AGGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTG...TTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp TGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAATGAGCCCAGGTGCCCTCCATGGGATTCACTGGTaGCCTATCAAGAACCCTGCT +
Preference number: 2 (lower is better)
Translates to: CLFGVSKSRSPQMSPGALHGIHW*PIKNPA
Trigger: AGCAGGGTTCTTGATAGGCCACCAGTGAATCCCATG...GAGGGCACCTGGGCTCATTTGTGGACTACGTGATTTTGAGACTCCAAATAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp AAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGACTGCTGGCATGGGATTCACTaGTGGCCTATCAAGAACCCT +
Preference number: 2 (lower is better)
Translates to: KGWLKCSLEISQGDANDCWHGIH*WPIKNP
Trigger: AGGGTTCTTGATAGGCCACCAGTGAATCCCATGCCA...GCAGTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp CACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCCAAATACCCAGTGCATGCTAATGACTGCTTaGGGAGACCCAGGACTGAGG +
Preference number: 2 (lower is better)
Translates to: HLHAYHSQLCISNPNTQCMLMTA*GDPGLR
Trigger: CCTCAGTCCTGGGTCTCCCCAAGCAGTCATTAGCAT...GCACTGGGTATTTGGGTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp TCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAATCACAGCCCCCTTCATaGCCACTAGTGGAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: SNPNTQCLFGVSKSRSPQSQPPS*PLVEGR
Trigger: TCTGCCCTCCACTAGTGGCCATGAAGGGGGCTGTGA...TTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp TCTGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTACCTTCCTTTCTCACCTaGACCACGGTCACAGCCCCC +
Preference number: 2 (lower is better)
Translates to: SVSPTQIPSAYLESQNHVPSFLT*TTVTAP
Trigger: GGGGGCTGTGACCGTGGTCCAGGTGAGAAAGGAAGG...TACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CAA 90 bp GTGTGGCTGCAACTGTTGTGGTCACTTAGGCAAGCTCTTGTGTCTTaGATGCAGGAGTTTGAGCAGCAGCAACTGAAGGCTTCTATTTTG +
Preference number: 2 (lower is better)
Translates to: VWLQLLWSLRQALVS*MQEFEQQQLKASIL
Trigger: CAAAATAGAAGCCTTCAGTTGCTGCTGCTCAAACTCCTGCATCAAAGACACAAGAGCTTGCCTAAGTGACCACAACAGTTGCAGCCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR TCA 90 bp CTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATATCAGAAGCACTTCCAATaGGTGATGCAGAGATTTCAA +
Preference number: 2 (lower is better)
Translates to: LLVQGCFVQAHPCLQQQYQKHFQ*VMQRFQ
Trigger: TTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTG...ATATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp CACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCCAAATACCCAGTGCAGACAGTCCCGGGTTTaGGTCCAGCTCTACTCTTTT +
Preference number: 2 (lower is better)
Translates to: HLHAYHSQLCISNPNTQCRQSRV*VQLYSF
Trigger: AAAAGAGTAGAGCTGGACTCAAACCCGGGACTGTCT...GCACTGGGTATTTGGGTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp TTCCTCCGTCACTGCTCAACTCTCGGTTATTTTTCTCACCCTACCTTAGAACTCAGACAGTCCCGGGTTTaGGTCCAGCTCTACTCTTTT +
Preference number: 2 (lower is better)
Translates to: FLRHCSTLGYFSHPTLELRQSRV*VQLYSF
Trigger: AAAAGAGTAGAGCTGGACTCAAACCCGGGACTGTCT...GAGTTCTAAGGTAGGGTGAGAAAAATAACCGAGAGTTGAGCAGTGACGGAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp AGCCACGATCTTGCAACCAATTGTGGGCAACCTCAATTCAGATGCCTAGAGAGCTTGTGCATATGCCTTTaGACAGAGGGAACATCCATG +
Preference number: 2 (lower is better)
Translates to: SHDLATNCGQPQFRCLESLCICL*TEGTSM
Trigger: CATGGATGTTCCCTCTGTTCAAAGGCATATGCACAA...GCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR GCA 90 bp CAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGAGCAAATCCTCACACTaGCTGGACATGTGCCACTTT +
Preference number: 2 (lower is better)
Translates to: QLNTEQLSSEALPMSDAESKSSH*LDMCHF
Trigger: AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCT...CTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000610179.6
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
3UTR-3UTR GCA 90 bp GTCCGCCCACTACCCAAGGAAATTCTGCCAAGAAAAGAAGCCCTGTCTCTCCAGTGCCCTTCCAAAAACTaGTTGTTAAGTTTCAGGTAC +
Preference number: 2 (lower is better)
Translates to: VRPLPKEILPRKEALSLQCPSKN*LLSFRY
Trigger: GTACCTGAAACTTAACAAGCAGTTTTTGGAAGGGCA...CTGGAGAGACAGGGCTTCTTTTCTTGGCAGAATTTCCTTGGGTAGTGGGCGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp TCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAGCCAGTGTACCCACTTaGATCAGAACAGTCCGCCCA +
Preference number: 2 (lower is better)
Translates to: SNPNTQCLFGVSKSRSPQASVPT*IRTVRP
Trigger: TGGGCGGACTGTTCTGATGCAAGTGGGTACACTGGC...TTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp CACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCCAAATACCCAGTGCGTACAGGCCCATCCTTaGCTTCAACAGCAATATGGG +
Preference number: 2 (lower is better)
Translates to: HLHAYHSQLCISNPNTQCVQAHP*LQQQYG
Trigger: CCCATATTGCTGTTGAAGGCAAGGATGGGCCTGTAC...GCACTGGGTATTTGGGTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp TCTGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGCAGCCATCCTGCTCTaGACCCACACAAGGTCCCAA +
Preference number: 2 (lower is better)
Translates to: SVSPTQIPSAYLESQNHVAAILL*THTRSQ
Trigger: TTGGGACCTTGTGTGGGTGCAGAGCAGGATGGCTGC...TACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp CACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCCAAATACCCAGTGCGGATGTGGGCACTGCTaGACAGAGATCAACAAATGC +
Preference number: 2 (lower is better)
Translates to: HLHAYHSQLCISNPNTQCGCGHC*TEINKC
Trigger: GCATTTGTTGATCTCTGTGCAGCAGTGCCCACATCC...GCACTGGGTATTTGGGTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp AGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTCCACAGATCCCATTGTaGAAGGTTTCAGGAACCCCT +
Preference number: 2 (lower is better)
Translates to: SRQLIYSKSSHCLDMCHFPQIPL*KVSGTP
Trigger: AGGGGTTCCTGAAACCTTCCACAATGGGATCTGTGG...AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000610179.6
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
3UTR-3UTR CCA 90 bp GTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGGTGCATTCTCTCCTTaGGAAAGGCTTTTGAAATTA +
Preference number: 2 (lower is better)
Translates to: VFPPGPRLLCTGPSLPSTGAFSP*ERLLKL
Trigger: TAATTTCAAAAGCCTTTCCCAAGGAGAGAATGCACC...TGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CAA 90 bp AAGATGCAAAGATGTACTCCACTTTTTGACCAAGCATCAGCACCTTaGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCA +
Preference number: 2 (lower is better)
Translates to: KMQRCTPLFDQASAP*AYHPVLTSVTVRAP
Trigger: TGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGGTGCTGATGCTTGGTCAAAAAGTGGAGTACATCTTTGCATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR TCA 90 bp AAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGACTGCAAAGTAATAGCACTGTaGCCGTCCATTGAATCCGAC +
Preference number: 2 (lower is better)
Translates to: KGWLKCSLEISQGDANDCKVIAL*PSIESD
Trigger: GTCGGATTCAATGGACGGTCACAGTGCTATTACTTT...GCAGTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643504.2
3UTR-3UTR TCA 90 bp GAAGGTTTCAGGAACCCCTCCCCAGGTAATGATCACGGGATCTTCAACAGCTCAACACATTCTTGCTATTaGGCCAATGTTGTTGGTGAT +
Preference number: 2 (lower is better)
Translates to: EGFRNPSPGNDHGIFNSSTHSCY*ANVVGD
Trigger: ATCACCAACAACATTGGCTCAATAGCAAGAATGTGT...TGAGCTGTTGAAGATCCCGTGATCATTACCTGGGGAGGGGTTCCTGAAACCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
3UTR-3UTR GCA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTAGCAAATCCTCACACTaGCTGGACATGTGCCACTTT +
Preference number: 2 (lower is better)
Translates to: THEIPLALPTYMHIILSSSKSSH*LDMCHF
Trigger: AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCT...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp AGTCAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAAGCAAATCCTCACACTaGCTGGACATGTGCCACTTT +
Preference number: 2 (lower is better)
Translates to: SQLNTEQLSSEALPMSDASKSSH*LDMCHF
Trigger: AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCT...TGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000610179.6
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
3UTR-3UTR GCA 90 bp AAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAGGCACGGTACACAATTAACCTaGCCAATTAATTTTGCAGAA +
Preference number: 2 (lower is better)
Translates to: KLKARQKGTSTASSQLRHGTQLT*PINFAE
Trigger: TTCTGCAAAATTAATTGGGCAGGTTAATTGTGTACC...GTGCCTGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp CTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATATTGCCCTTCCAAAAACTaGTTGTTAAGTTTCAGGTAC +
Preference number: 2 (lower is better)
Translates to: LLVQGCFVQAHPCLQQQYCPSKN*LLSFRY
Trigger: GTACCTGAAACTTAACAAGCAGTTTTTGGAAGGGCA...ATATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp CCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACTACCCAAGGAAATTCTaGCAAGAAAAGAAGCCCTGT +
Preference number: 2 (lower is better)
Translates to: PPCFAHLHAYHSQLCISNYPRKF*QEKKPC
Trigger: ACAGGGCTTCTTTTCTTGGCAGAATTTCCTTGGGTA...GTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp CTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATATCTCAGATATAAAAGGTaGATTCTCTCCTTGGGAAAG +
Preference number: 2 (lower is better)
Translates to: LLVQGCFVQAHPCLQQQYLRYKR*ILSLGK
Trigger: CTTTCCCAAGGAGAGAATGCACCTTTTATATCTGAG...ATATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp AGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTATTTTCTGTCTCAAAAACCCTaGTGTGGAGTGACAGGGTTT +
Preference number: 2 (lower is better)
Translates to: SSRFLCSFLRHCSTLGYFLSQKP*CGVTGF
Trigger: AAACCCTGTCACTCCACAGCAGGGTTTTTGAGACAG...AAAATAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp TGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAATGAGCCCAGGTGCCCTCAAGATCACCTATCTTTaGGTCCACACAGAGTCAGGT +
Preference number: 2 (lower is better)
Translates to: CLFGVSKSRSPQMSPGALKITYL*VHTESG
Trigger: ACCTGACTCTGTGTGGACGCAAAGATAGGTGATCTT...GAGGGCACCTGGGCTCATTTGTGGACTACGTGATTTTGAGACTCCAAATAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643504.2
3UTR-3UTR CCA 90 bp GGCTGTGAAATGAATGCCAGATTCGGTGGCATGGGATTCACTGGTGGCCTATCAGGTGCATTCTCTCCTTaGGAAAGGCTTTTGAAATTA +
Preference number: 2 (lower is better)
Translates to: GCEMNARFGGMGFTGGLSGAFSP*ERLLKL
Trigger: TAATTTCAAAAGCCTTTCCCAAGGAGAGAATGCACC...TGATAGGCCACCAGTGAATCCCATGCCACCGAATCTGGCATTCATTTCACAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp ATTTTTCTGATTGACTTTCTATCTGCGACAGGATGCTCAAGATCAGGCTCTGTATGGTGGTGCCATCTTTaGTGCCTGGGTACTGGAGGA +
Preference number: 2 (lower is better)
Translates to: IFLIDFLSATGCSRSGSVWWCHL*CLGTGG
Trigger: TCCTCCAGTACCCAGGCACCAAAGATGGCACCACCA...TACAGAGCCTGATCTTGAGCATCCTGTCGCAGATAGAAAGTCAATCAGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CCA 90 bp TGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCAAGCAGGAGGATGGTaGTGCCATCTTTGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: CISNPNTQCLFGVSKSRSQAGGW*CHLWCL
Trigger: CAGGCACCAAAGATGGCACCACCATCCTCCTGCTTG...ACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp AGCCACGATCTTGCAACCAATTGTGGGCAACCTCAATTCAGATGCCTAGAGAGCTCTTGCAACCAATTGTaGGCAACCTCAATTCAGATG +
Preference number: 2 (lower is better)
Translates to: SHDLATNCGQPQFRCLESSCNQL*ATSIQM
Trigger: CATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGA...GCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp ACCACCTGGTTAATGTTTTCATTAAGGGCACACATTCTTGCTATTGAGCCAATGAGCCACAGCCCAGCCTaGCAGTCCAAACCTCTCATA +
Preference number: 2 (lower is better)
Translates to: TTWLMFSLRAHILAIEPMSHSPA*QSKPLI
Trigger: TATGAGAGGTTTGGACTGCCAGGCTGGGCTGTGGCT...CATTGGCTCAATAGCAAGAATGTGTGCCCTTAATGAAAACATTAACCAGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
3UTR-3UTR TCA 90 bp AAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGACTGCCAGAAGCACTTCCAATaGGTGATGCAGAGATTTCAA +
Preference number: 2 (lower is better)
Translates to: KGWLKCSLEISQGDANDCQKHFQ*VMQRFQ
Trigger: TTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTG...GCAGTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp TCTGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAAACCCTGCTGTGGAGTaGCAGGGTTTACTGAGCACA +
Preference number: 2 (lower is better)
Translates to: SVSPTQIPSAYLESQNHVNPAVE*QGLLST
Trigger: TGTGCTCAGTAAACCCTGTCACTCCACAGCAGGGTT...TACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp AACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAACTGTGACCGTCCATTaGATCCGACTGAGTCAATGT +
Preference number: 2 (lower is better)
Translates to: NTEQLSSEALPMSDAEISTVTVH*IRLSQC
Trigger: ACATTGACTCAGTCGGATTCAATGGACGGTCACAGT...TGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
3UTR-3UTR GCA 90 bp GTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGGTACACAATTAACCTaGCCAATTAATTTTGCAGAA +
Preference number: 2 (lower is better)
Translates to: VFPPGPRLLCTGPSLPSTGTQLT*PINFAE
Trigger: TTCTGCAAAATTAATTGGGCAGGTTAATTGTGTACC...TGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp TGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAATGAGCCCAGGTGCCCTCAAAGTAACGTGGAACTaGCCTTCCAAAAACTGCTTG +
Preference number: 2 (lower is better)
Translates to: CLFGVSKSRSPQMSPGALKVTWN*PSKNCL
Trigger: CAAGCAGTTTTTGGAAGGGCAGTTCCACGTTACTTT...GAGGGCACCTGGGCTCATTTGTGGACTACGTGATTTTGAGACTCCAAATAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp TGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTGGTGATGCTAATGACTaGTTGGGGAGACCCAGGACT +
Preference number: 2 (lower is better)
Translates to: CISNPNTQCLFGVSKSRSGDAND*LGRPRT
Trigger: AGTCCTGGGTCTCCCCAAGCAGTCATTAGCATCACC...ACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp CTGGAGCTCAGAGGTAAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTAACCCAAATACCCAGTaGTTATTTGGAGTCTCAAAA +
Preference number: 2 (lower is better)
Translates to: LELRGKGWLKCSLEISQGNPNTQ*LFGVSK
Trigger: TTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTT...ACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTTACCTCTGAGCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp AGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTATTTTCTTTGCCCACCTACATaGATATCATTCTCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: SSRFLCSFLRHCSTLGYFLCPPT*ISFSAL
Trigger: CAGAGCTGAGAATGATATGCATGTAGGTGGGCAAAG...AAAATAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp TCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAAGCAGTCGTTTTCTTTaGAGCTTCCTCCGTCACTGC +
Preference number: 2 (lower is better)
Translates to: SNPNTQCLFGVSKSRSPQSSRFL*SFLRHC
Trigger: GCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCT...TTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTCAACAGCTCAAGGAGTaGTCCAACAGCTCCAAAATA +
Preference number: 2 (lower is better)
Translates to: THEIPLALPTYMHIILSSQQLKE*SNSSKI
Trigger: TATTTTGGAGCTGTTGGAGCACTCCTTGAGCTGTTG...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643504.2
3UTR-3UTR CCA 90 bp TTCCTCCGTCACTGCTCAACTCTCGGTTATTTTTCTCACCCTACCTTAGAACTCCCTTCAACAGCAATATaGGCACCACTTAAGACCTCA +
Preference number: 2 (lower is better)
Translates to: FLRHCSTLGYFSHPTLELPSTAI*APLKTS
Trigger: TGAGGTCTTAAGTGGTGCCCATATTGCTGTTGAAGG...GAGTTCTAAGGTAGGGTGAGAAAAATAACCGAGAGTTGAGCAGTGACGGAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp GTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTCTCTTAAACCAGATTCTCCCTaGTCCCCTGAGGGGGTGTCA +
Preference number: 2 (lower is better)
Translates to: VLSHFVSGSTVMKLSKSLKPDSP*SPEGVS
Trigger: TGACACCCCCTCAGGGGATCAGGGAGAATCTGGTTT...AAGAGACTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp TCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAGCACAAGGTGGAACATaGGGGAATGGACTAGTTTCT +
Preference number: 2 (lower is better)
Translates to: SNPNTQCLFGVSKSRSPQAQGGT*GNGLVS
Trigger: AGAAACTAGTCCATTCCCTCATGTTCCACCTTGTGC...TTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp CACAGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGAGCAAATCCTCACACTaGCTGGACATGTGCCACTTT +
Preference number: 2 (lower is better)
Translates to: HRLNANQSNAQMIAKTILSKSSH*LDMCHF
Trigger: AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCT...CAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000610179.6
ENST00000621507.1
ENST00000643504.2
3UTR-3UTR GCA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTTACCCAAGGAAATTCTaGCAAGAAAAGAAGCCCTGT +
Preference number: 2 (lower is better)
Translates to: THEIPLALPTYMHIILSSYPRKF*QEKKPC
Trigger: ACAGGGCTTCTTTTCTTGGCAGAATTTCCTTGGGTA...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp TCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAAGATTGTGCTGCTTCTaGCAGTGTACCCACTTGCAT +
Preference number: 2 (lower is better)
Translates to: SNPNTQCLFGVSKSRSPQRLCCF*QCTHLH
Trigger: ATGCAAGTGGGTACACTGGCAGAAGCAGCACAATCT...TTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp CAAGAAAAGAAGCCCTGTCTCTCCAGACATTCATTCCCAGGATTTAGTGTAAAGAGATTGTGCTGCTTCTaGCAGTGTACCCACTTGCAT +
Preference number: 2 (lower is better)
Translates to: QEKKPCLSRHSFPGFSVKRLCCF*QCTHLH
Trigger: ATGCAAGTGGGTACACTGGCAGAAGCAGCACAATCT...CTTTACACTAAATCCTGGGAATGAATGTCTGGAGAGACAGGGCTTCTTTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp CACAGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGAGATTGTGCTGCTTCTaGCAGTGTACCCACTTGCAT +
Preference number: 2 (lower is better)
Translates to: HRLNANQSNAQMIAKTILRLCCF*QCTHLH
Trigger: ATGCAAGTGGGTACACTGGCAGAAGCAGCACAATCT...CAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp TTCCTCCGTCACTGCTCAACTCTCGGTTATTTTTCTCACCCTACCTTAGAACTCACAGAGATCAACAAATaGAGAGAGAAGGCAGTGTCT +
Preference number: 2 (lower is better)
Translates to: FLRHCSTLGYFSHPTLELTEINK*REKAVS
Trigger: AGACACTGCCTTCTCTCTGCATTTGTTGATCTCTGT...GAGTTCTAAGGTAGGGTGAGAAAAATAACCGAGAGTTGAGCAGTGACGGAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp AGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACACCACAGATCCCATTGTaGAAGGTTTCAGGAACCCCT +
Preference number: 2 (lower is better)
Translates to: RLNANQSNAQMIAKTILTPQIPL*KVSGTP
Trigger: AGGGGTTCCTGAAACCTTCCACAATGGGATCTGTGG...TGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000610179.6
ENST00000621507.1
ENST00000643504.2
3UTR-3UTR CCA 90 bp ACATGTTTTACAGTAAGTTCACACACAGGCTTAATGCAAACCAGAGTAATGCACTGGGGTTTTCCCTCCTaGTCCAAGGCTGCTTTGTAC +
Preference number: 2 (lower is better)
Translates to: TCFTVSSHTGLMQTRVMHWGFPS*SKAALY
Trigger: GTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCA...GTGCATTACTCTGGTTTGCATTAAGCCTGTGTGTGAACTTACTGTAAAACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp TGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCATGGGATTCACTGGTaGCCTATCAAGAACCCTGCT +
Preference number: 2 (lower is better)
Translates to: CISNPNTQCLFGVSKSRSHGIHW*PIKNPA
Trigger: AGCAGGGTTCTTGATAGGCCACCAGTGAATCCCATG...ACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp ATTTTTCTGATTGACTTTCTATCTGCGACAGGATGCTCAAGATCAGGCTCTGTATGGCATGGGATTCACTaGTGGCCTATCAAGAACCCT +
Preference number: 2 (lower is better)
Translates to: IFLIDFLSATGCSRSGSVWHGIH*WPIKNP
Trigger: AGGGTTCTTGATAGGCCACCAGTGAATCCCATGCCA...TACAGAGCCTGATCTTGAGCATCCTGTCGCAGATAGAAAGTCAATCAGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CCA 90 bp ATTTTTCTGATTGACTTTCTATCTGCGACAGGATGCTCAAGATCAGGCTCTGTAACCAGTGGTGATGTGTaGCTGCAACTGTTGTGGTCA +
Preference number: 2 (lower is better)
Translates to: IFLIDFLSATGCSRSGSVTSGDV*LQLLWS
Trigger: TGACCACAACAGTTGCAGCCACACATCACCACTGGT...TACAGAGCCTGATCTTGAGCATCCTGTCGCAGATAGAAAGTCAATCAGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CCA 90 bp TTCCTCCGTCACTGCTCAACTCTCGGTTATTTTTCTCACCCTACCTTAGAACTCCTTTCAACTGCCCCTTaGACCAATAATCCAAAGCAT +
Preference number: 2 (lower is better)
Translates to: FLRHCSTLGYFSHPTLELLSTAP*TNNPKH
Trigger: ATGCTTTGGATTATTGGTCCAAGGGGCAGTTGAAAG...GAGTTCTAAGGTAGGGTGAGAAAAATAACCGAGAGTTGAGCAGTGACGGAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643504.2
3UTR CAA 90 bp TTATTTTTCTCACCCTACCTTAGAACTCATGAAATCCCCCTTGCTTaGCCCACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACC +
Preference number: 2 (lower is better)
Translates to: LFFSPYLRTHEIPLA*PTYMHIILSSVSPT
Trigger: GGTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGTTCTAAGGTAGGGTGAGAAAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp TCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAACAACCTCAATTCAGATaGCTAGAGAGCTCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: SNPNTQCLFGVSKSRSPQQPQFR*LESSSS
Trigger: AGAAGAGGAGCTCTCTAGGCATCTGAATTGAGGTTG...TTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGCCACAGATCCCATTGTaGAAGGTTTCAGGAACCCCT +
Preference number: 2 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKPQIPL*KVSGTP
Trigger: AGGGGTTCCTGAAACCTTCCACAATGGGATCTGTGG...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000610179.6
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
3UTR-3UTR CCA 90 bp ACATGTTTTACAGTAAGTTCACACACAGGCTTAATGCAAACCAGAGTAATGCACCCACAGATCCCATTGTaGAAGGTTTCAGGAACCCCT +
Preference number: 2 (lower is better)
Translates to: TCFTVSSHTGLMQTRVMHPQIPL*KVSGTP
Trigger: AGGGGTTCCTGAAACCTTCCACAATGGGATCTGTGG...GTGCATTACTCTGGTTTGCATTAAGCCTGTGTGTGAACTTACTGTAAAACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000610179.6
ENST00000621507.1
ENST00000643504.2
3UTR CAA 90 bp TGTAGAGCCCAAATTGTTACAAGATGCAAAGATGTACTCCACTTTTaGACCAAGCATCAGCACCTTTGGCTTACCATCCAGTCCTTACTT +
Preference number: 2 (lower is better)
Translates to: CRAQIVTRCKDVLHF*TKHQHLWLTIQSLL
Trigger: AAGTAAGGACTGGATGGTAAGCCAAAGGTGCTGATGCTTGGTCAAAAAGTGGAGTACATCTTTGCATCTTGTAACAATTTGGGCTCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR GCA 90 bp CAAAGCATATGCCAAAAGCCGCATGGCGATCGTATTAATTCTCAAGAAATTTCCCAACAGCTCAAGGAGTaGTCCAACAGCTCCAAAATA +
Preference number: 2 (lower is better)
Translates to: QSICQKPHGDRINSQEISQQLKE*SNSSKI
Trigger: TATTTTGGAGCTGTTGGAGCACTCCTTGAGCTGTTG...GGAAATTTCTTGAGAATTAATACGATCGCCATGCGGCTTTTGGCATATGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
3UTR-3UTR CCA 90 bp TGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCCTTCAACAGCAATATaGGCACCACTTAAGACCTCA +
Preference number: 2 (lower is better)
Translates to: CISNPNTQCLFGVSKSRSPSTAI*APLKTS
Trigger: TGAGGTCTTAAGTGGTGCCCATATTGCTGTTGAAGG...ACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR TCA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGACAAAACCAGTCAACTaGACACAGAGCAGCTCTCTT +
Preference number: 2 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKTKPVN*TQSSSL
Trigger: AAGAGAGCTGCTCTGTGTTCAGTTGACTGGTTTTGT...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000610179.6
ENST00000621507.1
ENST00000643504.2
3UTR-3UTR TCA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGAAAGTAATAGCACTGTaGCCGTCCATTGAATCCGAC +
Preference number: 2 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKKVIAL*PSIESD
Trigger: GTCGGATTCAATGGACGGTCACAGTGCTATTACTTT...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
3UTR-3UTR GCA 90 bp AGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACATGCCCTTCCAAAAACTaGTTGTTAAGTTTCAGGTAC +
Preference number: 2 (lower is better)
Translates to: RLNANQSNAQMIAKTILTCPSKN*LLSFRY
Trigger: GTACCTGAAACTTAACAAGCAGTTTTTGGAAGGGCA...TGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000610179.6
ENST00000621507.1
ENST00000643504.2
3UTR-3UTR TCA 90 bp CTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAATCAGAAGCACTTCCAATaGGTGATGCAGAGATTTCAA +
Preference number: 2 (lower is better)
Translates to: LNANQSNAQMIAKTILTNQKHFQ*VMQRFQ
Trigger: TTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTG...ATTTGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000610179.6
ENST00000621507.1
ENST00000643504.2
3UTR-3UTR TCA 90 bp ACATGTTTTACAGTAAGTTCACACACAGGCTTAATGCAAACCAGAGTAATGCACACACATTCTTGCTATTaGGCCAATGTTGTTGGTGAT +
Preference number: 2 (lower is better)
Translates to: TCFTVSSHTGLMQTRVMHTHSCY*ANVVGD
Trigger: ATCACCAACAACATTGGCTCAATAGCAAGAATGTGT...GTGCATTACTCTGGTTTGCATTAAGCCTGTGTGTGAACTTACTGTAAAACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
3UTR-3UTR GCA 90 bp CCACTTAAGACCTCAGATATAAAAGGTGCATTCTCTCCTTGGGAAAGGCTTTTGGGTACACAATTAACCTaGCCAATTAATTTTGCAGAA +
Preference number: 2 (lower is better)
Translates to: PLKTSDIKGAFSPWERLLGTQLT*PINFAE
Trigger: TTCTGCAAAATTAATTGGGCAGGTTAATTGTGTACC...CAAAAGCCTTTCCCAAGGAGAGAATGCACCTTTTATATCTGAGGTCTTAAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CCA 90 bp GTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTCTCTTGGTGCATTCTCTCCTTaGGAAAGGCTTTTGAAATTA +
Preference number: 2 (lower is better)
Translates to: VLSHFVSGSTVMKLSKSLGAFSP*ERLLKL
Trigger: TAATTTCAAAAGCCTTTCCCAAGGAGAGAATGCACC...AAGAGACTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR GCA 90 bp CTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAATGGTACACAATTAACCTaGCCAATTAATTTTGCAGAA +
Preference number: 2 (lower is better)
Translates to: LNANQSNAQMIAKTILTNGTQLT*PINFAE
Trigger: TTCTGCAAAATTAATTGGGCAGGTTAATTGTGTACC...ATTTGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000610179.6
ENST00000621507.1
ENST00000643504.2
3UTR GCA 72 bp CAGTTCCCCTTGCCCCAGCTGGAACACGGGTGTCTCTaGTGCCTCCATGCGGCTGGCACCCTGCCCATCCCT +
Preference number: 3 (lower is better)
Translates to: QFPLPQLEHGCL*CLHAAGTLPIP
Trigger: AGGGATGGGCAGGGTGCCAGCCGCATGGAGGCAGCAGAGACACCCGTGTTCCAGCTGGGGCAAGGGGAACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 72 bp CAGTGCCTCTGTCCACACCCACCTCCCTGGTGTACTTaGCCCCTACAGCAGCAGCCCAGATCCTCCCCTGGA +
Preference number: 3 (lower is better)
Translates to: QCLCPHPPPWCT*PLQQQPRSSPG
Trigger: TCCAGGGGAGGATCTGGGCTGCTGCTGTAGGGGGCAAGTACACCAGGGAGGTGGGTGTGGACAGAGGCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR CCA 72 bp GCCCACAGCCCACATATCAGTTCCCCTTGCCCCAGCTaGAACACGGGTGTCTCTGCTGCCTCCATGCGGCTG +
Preference number: 3 (lower is better)
Translates to: AHSPHISSPCPS*NTGVSAASMRL
Trigger: CAGCCGCATGGAGGCAGCAGAGACACCCGTGTTCCAGCTGGGGCAAGGGGAACTGATATGTGGGCTGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 72 bp AGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTaGAGGAGGGTGAGGCCACCAACAGCGCTGCTGGCA +
Preference number: 3 (lower is better)
Translates to: RRMVVPSLVPGY*RRVRPPTALLA
Trigger: TGCCAGCAGCGCTGTTGGTGGCCTCACCCTCCTCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp CTGCATCTCACGCCCACTGCACACCGTTCCTCTCCATCTGCCCTTCCCTCCCAGTGCCAGTGTACCCACTaGCATCAGAACAGTCCGCCC +
Preference number: 3 (lower is better)
Translates to: LHLTPTAHRSSPSALPSQCQCTH*HQNSPP
Trigger: GGGCGGACTGTTCTGATGCAAGTGGGTACACTGGCA...CTGGGAGGGAAGGGCAGATGGAGAGGAACGGTGTGCAGTGGGCGTGAGATGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR GCA 72 bp AGTGGAACAGCCCACAGCCCACATATCAGTTCCCCTTaGCCCAGCTGGAACACGGGTGTCTCTGCTGCCTCC +
Preference number: 3 (lower is better)
Translates to: SGTAHSPHISSP*PSWNTGVSAAS
Trigger: GGAGGCAGCAGAGACACCCGTGTTCCAGCTGGGGCAAGGGGAACTGATATGTGGGCTGTGGGCTGTTCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 72 bp AGTCCCAAGCCTGGTGGATCTGCATCTCACGCCCACTaGACACCGTTCCTCTCCATCTGCCCTTCCCTCCCA +
Preference number: 3 (lower is better)
Translates to: SPKPGGSASHAH*TPFLSICPSLP
Trigger: TGGGAGGGAAGGGCAGATGGAGAGGAACGGTGTGCAGTGGGCGTGAGATGCAGATCCACCAGGCTTGGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR CCA 72 bp AGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTaGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCC +
Preference number: 3 (lower is better)
Translates to: SREAAEPWGFPS*SKAALYRPILA
Trigger: GGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 72 bp AGGGAGCAGCACCCTGTGGTACAAGCAGGAGGATGGTaGTGCCATCTTTGGTGCCTGGGTACTGGAGGAGGG +
Preference number: 3 (lower is better)
Translates to: REQHPVVQAGGW*CHLWCLGTGGG
Trigger: CCCTCCTCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGGGTGCTGCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 72 bp CCCAGGGAGCAGCACCCTGTGGTACAAGCAGGAGGATaGTGGTGCCATCTTTGGTGCCTGGGTACTGGAGGA +
Preference number: 3 (lower is better)
Translates to: PREQHPVVQAGG*WCHLWCLGTGG
Trigger: TCCTCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGGGTGCTGCTCCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR TCA 72 bp GCTGCTGGCCCCTCCCCTACCTTGGCCAGTTCCAAGTaGGGACCAGTGGTGATGTGTGGCTGCAACTGTTGT +
Preference number: 3 (lower is better)
Translates to: AAGPSPTLASSK*GPVVMCGCNCC
Trigger: ACAACAGTTGCAGCCACACATCACCACTGGTCCTCACTTGGAACTGGCCAAGGTAGGGGAGGGGCCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR GCA 72 bp CTCAGCTCCCTTTGCCAGTCCCAAGCCTGGTGGATCTaGATCTCACGCCCACTGCACACCGTTCCTCTCCAT +
Preference number: 3 (lower is better)
Translates to: LSSLCQSQAWWI*ISRPLHTVPLH
Trigger: ATGGAGAGGAACGGTGTGCAGTGGGCGTGAGATGCAGATCCACCAGGCTTGGGACTGGCAAAGGGAGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR CCA 72 bp CCTTTCTCACCTGGACCACGGTCACAGCCCCCTTCATaGCCACTAGTGGAGGGCAGACTGAAAGGGACAGCT +
Preference number: 3 (lower is better)
Translates to: PFSPGPRSQPPS*PLVEGRLKGTA
Trigger: AGCTGTCCCTTTCAGTCTGCCCTCCACTAGTGGCCATGAAGGGGGCTGTGACCGTGGTCCAGGTGAGAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp CTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCACATGCCAGTGTACCCACTaGCATCAGAACAGTCCGCCC +
Preference number: 3 (lower is better)
Translates to: LQGTKLPSTQQPSCSAPTCQCTH*HQNSPP
Trigger: GGGCGGACTGTTCTGATGCAAGTGGGTACACTGGCA...TGTGGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp ACTCTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCTGCCAGTGTACCCACTaGCATCAGAACAGTCCGCCC +
Preference number: 3 (lower is better)
Translates to: TLQGTKLPSTQQPSCSAPCQCTH*HQNSPP
Trigger: GGGCGGACTGTTCTGATGCAAGTGGGTACACTGGCA...GGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp TCCGCCTCCCAGGTTCACGCCATTCTCCCGCCTCGGGAGCTGGGACAACAGGTGCGATCTTGCAACCAATaGTGGGCAACCTCAATTCAG +
Preference number: 3 (lower is better)
Translates to: SASQVHAILPPRELGQQVRSCNQ*WATSIQ
Trigger: CTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCG...CACCTGTTGTCCCAGCTCCCGAGGCGGGAGAATGGCGTGAACCTGGGAGGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CAA 90 bp AGTAGGGGCACAGACTTGTGCCTCGCTTCCCAGCAGCTGCCCAGTGCCTCTGTCGGTCTTCTGACATCATaGCCAGGAACGGGGCACTTT +
Preference number: 3 (lower is better)
Translates to: SRGTDLCLASQQLPSASVGLLTS*PGTGHF
Trigger: AAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGACC...GACAGAGGCACTGGGCAGCTGCTGGGAAGCGAGGCACAAGTCTGTGCCCCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CAA 90 bp GTGGCCCTGCTGACTCATGTTAGTCCTCCAGATTGTGCTGCTTCTGCCAGTGTAGGAGGCTGCAGAGCCTaGGGGTTTTCCCTCCTGGTC +
Preference number: 3 (lower is better)
Translates to: VALLTHVSPPDCAASASVGGCRA*GFSLLV
Trigger: GACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCC...TACACTGGCAGAAGCAGCACAATCTGGAGGACTAACATGAGTCAGCAGGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp CCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCACCAGTGGCAAGTTCACAGGAGTaGGCCCAGGGAGCAGCACCC +
Preference number: 3 (lower is better)
Translates to: PLAYHPVLTSVTVRAPPVASSQE*AQGAAP
Trigger: GGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTGC...CACTGGTGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CAA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACGAAATCCCCCTTGCTTaGCCCACCTACATGCATATC +
Preference number: 3 (lower is better)
Translates to: HHPSLGPSGFPASIKASHEIPLA*PTYMHI
Trigger: GATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTC...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR TCA 72 bp ATCTGCGACAGGATGCTCAAGATCAGGCTCTGTAGCTaGCAGCAGTGGCACAGGCCTCTCCCAGCTCTGAGC +
Preference number: 3 (lower is better)
Translates to: ICDRMLKIRLCS*QQWHRPLPALS
Trigger: GCTCAGAGCTGGGAGAGGCCTGTGCCACTGCTGTCAGCTACAGAGCCTGATCTTGAGCATCCTGTCGCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR GCA 72 bp CAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTaGTCTGCACCCACACAAGGTCCCAATGCAGCAGCA +
Preference number: 3 (lower is better)
Translates to: QGTKLPSTQQPS*SAPTQGPNAAA
Trigger: TGCTGCTGCATTGGGACCTTGTGTGGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 72 bp TGCAGTGCAGCAATCTCGGCTCACTGCAGCAACCTCTaGCTCCCAGGTTCAAGCAACTGTCTGCCTCAGCCT +
Preference number: 3 (lower is better)
Translates to: CSAAISAHCSNL*LPGSSNCLPQP
Trigger: AGGCTGAGGCAGACAGTTGCTTGAACCTGGGAGGCAGAGGTTGCTGCAGTGAGCCGAGATTGCTGCACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
3UTR CCA 72 bp TCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTaGCCCAGGGAGCAGCACCCTGTGGTACAAGCAGGA +
Preference number: 3 (lower is better)
Translates to: SVSMGSEQVHRS*PREQHPVVQAG
Trigger: TCCTGCTTGTACCACAGGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp GGAGGAAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCATGGTCCAAGGCTGCTTaGTACAGGCCCATCCTTGCC +
Preference number: 3 (lower is better)
Translates to: GGSSKRGRRGHQQRLPNSWSKAA*YRPILA
Trigger: GGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCA...TGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp AGGCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCAAGAGGTAAGGGGTGGTaGAAGTGTTCCCTGGAAATC +
Preference number: 3 (lower is better)
Translates to: RPWPRSPWEVSKFTGVGPRGKGW*KCSLEI
Trigger: GATTTCCAGGGAACACTTCAACCACCCCTTACCTCT...TGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 72 bp CAAGGTCCCAATGCAGCAGCACCCATATTTCCTAAGTaGCAAGGCCCATGTGCAGAGGTGGCCACGCCTAGT +
Preference number: 3 (lower is better)
Translates to: QGPNAAAPIFPK*QGPCAEVATPS
Trigger: ACTAGGCGTGGCCACCTCTGCACATGGGCCTTGGCACTTAGGAAATATGGGTGCTGCTGCATTGGGACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 72 bp CCATATTTCCTAAGTGCCAAGGCCCATGTGCAGAGGTaGCCACGCCTAGTGGAACAGCCCACAGCCCACATA +
Preference number: 3 (lower is better)
Translates to: PYFLSAKAHVQR*PRLVEQPTAHI
Trigger: TATGTGGGCTGTGGGCTGTTCCACTAGGCGTGGCCACCTCTGCACATGGGCCTTGGCACTTAGGAAATATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 72 bp AATGAATGCCAGATTCGGTGGCATGGGATTCACTGGTaGCCTATCAAGAACCCTGCTGTGAGCCGGGCGCAG +
Preference number: 3 (lower is better)
Translates to: NECQIRWHGIHW*PIKNPAVSRAQ
Trigger: CTGCGCCCGGCTCACAGCAGGGTTCTTGATAGGCCACCAGTGAATCCCATGCCACCGAATCTGGCATTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 72 bp AACTCTCTTCTCAGCTCCCTTTGCCAGTCCCAAGCCTaGTGGATCTGCATCTCACGCCCACTGCACACCGTT +
Preference number: 3 (lower is better)
Translates to: NSLLSSLCQSQA*WICISRPLHTV
Trigger: AACGGTGTGCAGTGGGCGTGAGATGCAGATCCACCAGGCTTGGGACTGGCAAAGGGAGCTGAGAAGAGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CAA 90 bp AGTGATTGTGATGGAAGCCCCTGCCCTTCCTGTGGCATAGTGTGCAAGCGGGGGAGTCCACAGATCCCATaGTGGAAGGTTTCAGGAACC +
Preference number: 3 (lower is better)
Translates to: SDCDGSPCPSCGIVCKRGSPQIP*WKVSGT
Trigger: GGTTCCTGAAACCTTCCACAATGGGATCTGTGGACT...CCCCCGCTTGCACACTATGCCACAGGAAGGGCAGGGGCTTCCATCACAATCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CAA 90 bp GTGGCCCTGCTGACTCATGTTAGTCCTCCAGATTGTGCTGCTTCTGCCAGTGTATGCCAGTGTACCCACTaGCATCAGAACAGTCCGCCC +
Preference number: 3 (lower is better)
Translates to: VALLTHVSPPDCAASASVCQCTH*HQNSPP
Trigger: GGGCGGACTGTTCTGATGCAAGTGGGTACACTGGCA...TACACTGGCAGAAGCAGCACAATCTGGAGGACTAACATGAGTCAGCAGGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp GTGGCCCTGCTGACTCATGTTAGTCCTCCAGATTGTGCTGCTTCTGCCAGTGTATGGTCCAAGGCTGCTTaGTACAGGCCCATCCTTGCC +
Preference number: 3 (lower is better)
Translates to: VALLTHVSPPDCAASASVWSKAA*YRPILA
Trigger: GGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCA...TACACTGGCAGAAGCAGCACAATCTGGAGGACTAACATGAGTCAGCAGGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp GGAGGAAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAAGGCAGGAGAATTGCTaGAGCCTGGAAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: GGSSKRGRRGHQQRLPNSRQENC*SLEGRG
Trigger: ACCTCTGCCTTCCAGGCTCAAGCAATTCTCCTGCCT...TGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp GCGACAGGATGCTCAAGATCAGGCTCTGTAGCTGACAGCAGTGGCACAGGCCTCGGTCTTCCTAGAGTGTaGCTGGTAACTATCGCCTCT +
Preference number: 3 (lower is better)
Translates to: ATGCSRSGSVADSSGTGLGLPRV*LVTIAS
Trigger: AGAGGCGATAGTTACCAGCAACACTCTAGGAAGACC...GAGGCCTGTGCCACTGCTGTCAGCTACAGAGCCTGATCTTGAGCATCCTGTCGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CAA 90 bp GGGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTCAGCAGTGATGTCTTaGGGTTCAAAATATACCAGC +
Preference number: 3 (lower is better)
Translates to: GSREAAEPWGFPSWSKAASAVMS*GSKYTS
Trigger: GCTGGTATATTTTGAACCCAAAGACATCACTGCTGA...AGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643504.2
3UTR TCA 72 bp GTCCCGGGTTTGAGTCCAGCTCTACTCTTTTCCAGCTaGGTGACCCTGGGCAGCCTTACTCATCCGTTCAGT +
Preference number: 3 (lower is better)
Translates to: VPGLSPALLFSS*VTLGSLTHPFS
Trigger: ACTGAACGGATGAGTAAGGCTGCCCAGGGTCACTCAGCTGGAAAAGAGTAGAGCTGGACTCAAACCCGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR TCA 72 bp AACAGAGAATCCTGGAATGCAGAGTACAGTGGAGTCTaGAGCCCCCTGGCCTCCCTGAGCTCTGCAAACAGC +
Preference number: 3 (lower is better)
Translates to: NRESWNAEYSGV*SPLASLSSANS
Trigger: GCTGTTTGCAGAGCTCAGGGAGGCCAGGGGGCTTCAGACTCCACTGTACTCTGCATTCCAGGATTCTCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR GCA 72 bp TGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTaGTTTGTACAGGCCCATCCTTGCCTTCAACAGCAA +
Preference number: 3 (lower is better)
Translates to: CRALGFSLLVQG*FVQAHPCLQQQ
Trigger: TTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 72 bp TTTGTGCTTTGGGGGAACTCTCTTCTCAGCTCCCTTTaGCAGTCCCAAGCCTGGTGGATCTGCATCTCACGC +
Preference number: 3 (lower is better)
Translates to: FVLWGNSLLSSL*QSQAWWICISR
Trigger: GCGTGAGATGCAGATCCACCAGGCTTGGGACTGGCAAAGGGAGCTGAGAAGAGAGTTCCCCCAAAGCACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR CCA 72 bp GGCAGTGTCTCGGGGCTGGAGCTCAGAGGTAAGGGGTaGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGAT +
Preference number: 3 (lower is better)
Translates to: GSVSGLELRGKG*LKCSLEISQGD
Trigger: ATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTTACCTCTGAGCTCCAGCCCCGAGACACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 72 bp ACCTCACAACCTGAAGGTGGTGAGACGGCAGTAAGCTaGGATGAGGATGTGGGCACTGCTGCACAGAGATCA +
Preference number: 3 (lower is better)
Translates to: TSQPEGGETAVS*DEDVGTAAQRS
Trigger: TGATCTCTGTGCAGCAGTGCCCACATCCTCATCCCAGCTTACTGCCGTCTCACCACCTTCAGGTTGTGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp GGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTAGGTGCATTCTCTCCTaGGGAAAGGCTTTTGAAATT +
Preference number: 3 (lower is better)
Translates to: GAGRLQSLGVFPPGPRLLRCILS*GKAFEI
Trigger: AATTTCAAAAGCCTTTCCCAAGGAGAGAATGCACCT...AAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp GGCTGTGAAATGAATGCCAGATTCGGTGGCATGGGATTCACTGGTGGCCTATCAACATATCAGTTCCCCTaGCCCCAGCTGGAACACGGG +
Preference number: 3 (lower is better)
Translates to: GCEMNARFGGMGFTGGLSTYQFP*PQLEHG
Trigger: CCCGTGTTCCAGCTGGGGCAAGGGGAACTGATATGT...TGATAGGCCACCAGTGAATCCCATGCCACCGAATCTGGCATTCATTTCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp TGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAATGAGCCCAGGTGCCCTCGCAAGTTCACAGGAGTaGGCCCAGGGAGCAGCACCC +
Preference number: 3 (lower is better)
Translates to: CLFGVSKSRSPQMSPGALASSQE*AQGAAP
Trigger: GGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTGC...GAGGGCACCTGGGCTCATTTGTGGACTACGTGATTTTGAGACTCCAAATAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp GCAGAAAGAAAAGCTTCAGCCCCTACCAAGAGCACCTGCAGCCTGGCACTCTCCCACTGTGACCGTCCATaGAATCCGACTGAGTCAATG +
Preference number: 3 (lower is better)
Translates to: AERKASAPTKSTCSLALSHCDRP*NPTESM
Trigger: CATTGACTCAGTCGGATTCAATGGACGGTCACAGTG...GGAGAGTGCCAGGCTGCAGGTGCTCTTGGTAGGGGCTGAAGCTTTTCTTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643504.2
3UTR-3UTR CAA 90 bp CCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATAGTCCACAGATCCCATaGTGGAAGGTTTCAGGAACC +
Preference number: 3 (lower is better)
Translates to: PSWSKAALYRPILAFNSNSPQIP*WKVSGT
Trigger: GGTTCCTGAAACCTTCCACAATGGGATCTGTGGACT...ATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp CCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCCTCCCCATGAGTTCTTaGACAGACACTTCAGTTCTT +
Preference number: 3 (lower is better)
Translates to: PWGFPSWSKAALYRPILALPMSS*TDTSVL
Trigger: AAGAACTGAAGTGTCTGTCAAAGAACTCATGGGGAG...GGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp CCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCACCAGTGCAGACAGTCCCGGGTTaGAGTCCAGCTCTACTCTTT +
Preference number: 3 (lower is better)
Translates to: PLAYHPVLTSVTVRAPPVQTVPG*SPALLF
Trigger: AAAGAGTAGAGCTGGACTCAAACCCGGGACTGTCTG...CACTGGTGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CAA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACATACCCAGTGCTTATTaGGAGTCTCAAAATCACGTA +
Preference number: 3 (lower is better)
Translates to: HHPSLGPSGFPASIKASHIPSAY*ESQNHV
Trigger: TACGTGATTTTGAGACTCCAAATAAGCACTGGGTAT...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 72 bp CCTCCAGATTGTGCTGCTTCTGCCAGTGTACCCACTTaGATCAGAACAGTCCGCCCACTACCCAAGGAAATT +
Preference number: 3 (lower is better)
Translates to: PPDCAASASVPT*IRTVRPLPKEI
Trigger: AATTTCCTTGGGTAGTGGGCGGACTGTTCTGATGCAAGTGGGTACACTGGCAGAAGCAGCACAATCTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 72 bp TGGCTTCCCAGCTTCCATCAAGGCCAGCCACGATCTTaGAACCAATTGTGGGCAACCTCAATTCAGATGCCT +
Preference number: 3 (lower is better)
Translates to: WLPSFHQGQPRS*NQLWATSIQMP
Trigger: AGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCTGGCCTTGATGGAAGCTGGGAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 72 bp CTTGGCCAGTTCCAAGTGAGGACCAGTGGTGATGTGTaGCTGCAACTGTTGTGGTCACTTAGGCAAGCTCTT +
Preference number: 3 (lower is better)
Translates to: LGQFQVRTSGDV*LQLLWSLRQAL
Trigger: AAGAGCTTGCCTAAGTGACCACAACAGTTGCAGCCACACATCACCACTGGTCCTCACTTGGAACTGGCCAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CAA 90 bp AGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTATTTTATGGTGGTGCCATCTTaGGTGCCTGGGTACTGGAGG +
Preference number: 3 (lower is better)
Translates to: SSRFLCSFLRHCSTLGYFMVVPS*VPGYWR
Trigger: CCTCCAGTACCCAGGCACCAAAGATGGCACCACCAT...AAAATAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 72 bp GATCTTGCAACCAATTGTGGGCAACCTCAATTCAGATaGCTAGAGAGCTCCTCTTCTCAGTCCCCTGAGCCA +
Preference number: 3 (lower is better)
Translates to: DLATNCGQPQFR*LESSSSQSPEP
Trigger: TGGCTCAGGGGACTGAGAAGAGGAGCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 72 bp GATCCTCCCGCCTCAGTCTGTAGCTGCGTCTACAGGTaGACACCAGCACACCTGGCTAATTTTCGTAATTAT +
Preference number: 3 (lower is better)
Translates to: DPPASVCSCVYR*TPAHLANFRNY
Trigger: ATAATTACGAAAATTAGCCAGGTGTGCTGGTGTGCACCTGTAGACGCAGCTACAGACTGAGGCGGGAGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR CCA 72 bp TTCCATCAAGGCCAGCCACGATCTTGCAACCAATTGTaGGCAACCTCAATTCAGATGCCTAGAGAGCTCCTC +
Preference number: 3 (lower is better)
Translates to: FHQGQPRSCNQL*ATSIQMPRELL
Trigger: GAGGAGCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCTGGCCTTGATGGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 72 bp GGTCTTCCTAGAGTGTTGCTGGTAACTATCGCCTCTTaGTCTTCTGACATCATTGCCAGGAACGGGGCACTT +
Preference number: 3 (lower is better)
Translates to: GLPRVLLVTIAS*SSDIIARNGAL
Trigger: AAGTGCCCCGTTCCTGGCAATGATGTCAGAAGACCAAGAGGCGATAGTTACCAGCAACACTCTAGGAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CAA 90 bp ATTTTTCTGATTGACTTTCTATCTGCGACAGGATGCTCAAGATCAGGCTCTGTAGGAGGCTGCAGAGCCTaGGGGTTTTCCCTCCTGGTC +
Preference number: 3 (lower is better)
Translates to: IFLIDFLSATGCSRSGSVGGCRA*GFSLLV
Trigger: GACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCC...TACAGAGCCTGATCTTGAGCATCCTGTCGCAGATAGAAAGTCAATCAGAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CAA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTGCTAAGGCAGGAGAATaGCTTGAGCCTGGAAGGCAG +
Preference number: 3 (lower is better)
Translates to: THEIPLALPTYMHIILSSAKAGE*LEPGRQ
Trigger: CTGCCTTCCAGGCTCAAGCAATTCTCCTGCCTTAGC...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 72 bp GCATCAGAACAGTCCGCCCACTACCCAAGGAAATTCTaGCAAGAAAAGAAGCCCTGTCTCTCCAGACATTCA +
Preference number: 3 (lower is better)
Translates to: ASEQSAHYPRKF*QEKKPCLSRHS
Trigger: TGAATGTCTGGAGAGACAGGGCTTCTTTTCTTGGCAGAATTTCCTTGGGTAGTGGGCGGACTGTTCTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 72 bp CTACTGAGCAAGTGCACAGTGAGTCTCATGTGGATATaGCTGAATGTCCAGCGTCAGTTCATGGAGCTACTC +
Preference number: 3 (lower is better)
Translates to: LLSKCTVSLMWI*LNVQRQFMELL
Trigger: GAGTAGCTCCATGAACTGACGCTGGACATTCAGGCATATCCACATGAGACTCACTGTGCACTTGCTCAGTAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CAA 90 bp AAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAGGCACCCTTCCAAAAACTGCTaGTTAAGTTTCAGGTACACA +
Preference number: 3 (lower is better)
Translates to: KLKARQKGTSTASSQLRHPSKNC*LSFRYT
Trigger: TGTGTACCTGAAACTTAACAAGCAGTTTTTGGAAGG...GTGCCTGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp GTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAAGGTGCATTCTCTCCTaGGGAAAGGCTTTTGAAATT +
Preference number: 3 (lower is better)
Translates to: VFPPGPRLLCTGPSLPSTRCILS*GKAFEI
Trigger: AATTTCAAAAGCCTTTCCCAAGGAGAGAATGCACCT...TGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp TGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAATGAGCCCAGGTGCCCTCTGTACAGGCCCATCCTaGCCTTCAACAGCAATATGG +
Preference number: 3 (lower is better)
Translates to: CLFGVSKSRSPQMSPGALCTGPS*PSTAIW
Trigger: CCATATTGCTGTTGAAGGCAAGGATGGGCCTGTACA...GAGGGCACCTGGGCTCATTTGTGGACTACGTGATTTTGAGACTCCAAATAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp AGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTATTTTCAGACAGTCCCGGGTTaGAGTCCAGCTCTACTCTTT +
Preference number: 3 (lower is better)
Translates to: SSRFLCSFLRHCSTLGYFQTVPG*SPALLF
Trigger: AAAGAGTAGAGCTGGACTCAAACCCGGGACTGTCTG...AAAATAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 72 bp ATTGCCAGGAACGGGGCACTTTTTCGTCTTGTAGTTTaGCCCTCGGGTTTCCTCACTAGGTATTGTGTAACT +
Preference number: 3 (lower is better)
Translates to: IARNGALFRLVV*PSGFLTRYCVT
Trigger: AGTTACACAATACCTAGTGAGGAAACCCGAGGGCCAAACTACAAGACGAAAAAGTGCCCCGTTCCTGGCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CAA 90 bp CCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCACCAGTGCCTTCCAAAAACTGCTaGTTAAGTTTCAGGTACACA +
Preference number: 3 (lower is better)
Translates to: PLAYHPVLTSVTVRAPPVPSKNC*LSFRYT
Trigger: TGTGTACCTGAAACTTAACAAGCAGTTTTTGGAAGG...CACTGGTGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CAA 90 bp TCTGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTATGGTCCAAGGCTGCTTaGTACAGGCCCATCCTTGCC +
Preference number: 3 (lower is better)
Translates to: SVSPTQIPSAYLESQNHVWSKAA*YRPILA
Trigger: GGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCA...TACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp TGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTTGGTCCAAGGCTGCTTaGTACAGGCCCATCCTTGCC +
Preference number: 3 (lower is better)
Translates to: CISNPNTQCLFGVSKSRSWSKAA*YRPILA
Trigger: GGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCA...ACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp TCTGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAATGGTGGTGCCATCTTaGGTGCCTGGGTACTGGAGG +
Preference number: 3 (lower is better)
Translates to: SVSPTQIPSAYLESQNHVMVVPS*VPGYWR
Trigger: CCTCCAGTACCCAGGCACCAAAGATGGCACCACCAT...TACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp AGTCAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCACACTGTGACCGTCCATaGAATCCGACTGAGTCAATG +
Preference number: 3 (lower is better)
Translates to: SQLNTEQLSSEALPMSDAHCDRP*NPTESM
Trigger: CATTGACTCAGTCGGATTCAATGGACGGTCACAGTG...TGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTGACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
3UTR-3UTR CAA 90 bp ATTTTTCTGATTGACTTTCTATCTGCGACAGGATGCTCAAGATCAGGCTCTGTAGATGCTAATGACTGCTaGGGGAGACCCAGGACTGAG +
Preference number: 3 (lower is better)
Translates to: IFLIDFLSATGCSRSGSVDANDC*GRPRTE
Trigger: CTCAGTCCTGGGTCTCCCCAAGCAGTCATTAGCATC...TACAGAGCCTGATCTTGAGCATCCTGTCGCAGATAGAAAGTCAATCAGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CAA 90 bp TTCCTCCGTCACTGCTCAACTCTCGGTTATTTTTCTCACCCTACCTTAGAACTCCGATCTTGCAACCAATaGTGGGCAACCTCAATTCAG +
Preference number: 3 (lower is better)
Translates to: FLRHCSTLGYFSHPTLELRSCNQ*WATSIQ
Trigger: CTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCG...GAGTTCTAAGGTAGGGTGAGAAAAATAACCGAGAGTTGAGCAGTGACGGAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTCGATCTTGCAACCAATaGTGGGCAACCTCAATTCAG +
Preference number: 3 (lower is better)
Translates to: THEIPLALPTYMHIILSSRSCNQ*WATSIQ
Trigger: CTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCG...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 72 bp CTGAGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTaGTCAACTCTCGGTTATTTTTCTCACCCTACCTTA +
Preference number: 3 (lower is better)
Translates to: LSSRFLCSFLRH*STLGYFSHPTL
Trigger: TAAGGTAGGGTGAGAAAAATAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 72 bp CAGATTTTTCTGATTGACTTTCTATCTGCGACAGGATaGTCAAGATCAGGCTCTGTAGCTGACAGCAGTGGC +
Preference number: 3 (lower is better)
Translates to: QIFLIDFLSATG*SRSGSVADSSG
Trigger: GCCACTGCTGTCAGCTACAGAGCCTGATCTTGAGCATCCTGTCGCAGATAGAAAGTCAATCAGAAAAATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR CCA 72 bp TTACTCATCCGTTCAGTTTCCTTTTCTGTTAAATTGTaGGAACAGCAAGGGCTGCATGGTGACCCACGTCGA +
Preference number: 3 (lower is better)
Translates to: LLIRSVSFSVKL*EQQGLHGDPRR
Trigger: TCGACGTGGGTCACCATGCAGCCCTTGCTGTTCCCACAATTTAACAGAAAAGGAAACTGAACGGATGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CCA 72 bp CCATGTGCCACTTACGCAAGCACCTTCAGCAAGACTTaGAAACTCAAGGTGAGTAATTCTATCAGAGCTGGT +
Preference number: 3 (lower is better)
Translates to: PCATYASTFSKT*KLKVSNSIRAG
Trigger: ACCAGCTCTGATAGAATTACTCACCTTGAGTTTCCAAGTCTTGCTGAAGGTGCTTGCGTAAGTGGCACATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CAA 90 bp AATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGAGTCCACAGATCCCATaGTGGAAGGTTTCAGGAACC +
Preference number: 3 (lower is better)
Translates to: NTKQATYIQQILTLPGHVSPQIP*WKVSGT
Trigger: GGTTCCTGAAACCTTCCACAATGGGATCTGTGGACT...CACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000610179.6
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
3UTR-3UTR CAA 90 bp TCTGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTATCATGTTTCCAAAGCTaGAAGCCACAGCCCAGCCTG +
Preference number: 3 (lower is better)
Translates to: SVSPTQIPSAYLESQNHVSCFQS*KPQPSL
Trigger: CAGGCTGGGCTGTGGCTTCAAGCTTTGGAAACATGA...TACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643504.2
3UTR-3UTR CAA 90 bp CAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGTCAAAATATACCAGCTaGACCAGAGTTCCACCGATA +
Preference number: 3 (lower is better)
Translates to: QLNTEQLSSEALPMSDAESKYTS*TRVPPI
Trigger: TATCGGTGGAACTCTGGTCAAGCTGGTATATTTTGA...CTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643504.2
3UTR GCA 72 bp CACCCTACCTTAGAACTCATGAAATCCCCCTTGCTTTaGCCACCTACATGCATATCATTCTCAGCTCTGTAT +
Preference number: 3 (lower is better)
Translates to: HPTLELMKSPLL*PPTCISFSALY
Trigger: ATACAGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGTTCTAAGGTAGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 72 bp ACAAATCAGAATCTGCAGTCCCTCCCTTACCCCAAATaGCCAGCTAATCCAAGAGCACAACCAGATTTTTCT +
Preference number: 3 (lower is better)
Translates to: TNQNLQSLPYPK*PANPRAQPDFS
Trigger: AGAAAAATCTGGTTGTGCTCTTGGATTAGCTGGGCATTTGGGGTAAGGGAGGGACTGCAGATTCTGATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CAA 90 bp ACCACCTGGTTAATGTTTTCATTAAGGGCACACATTCTTGCTATTGAGCCAATGAGTCCACAGATCCCATaGTGGAAGGTTTCAGGAACC +
Preference number: 3 (lower is better)
Translates to: TTWLMFSLRAHILAIEPMSPQIP*WKVSGT
Trigger: GGTTCCTGAAACCTTCCACAATGGGATCTGTGGACT...CATTGGCTCAATAGCAAGAATGTGTGCCCTTAATGAAAACATTAACCAGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
3UTR-3UTR CAA 90 bp CTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTCTGTCCTTTCTCACTTaGTTTCAGGTAGTACAGTCA +
Preference number: 3 (lower is better)
Translates to: LNTEQLSSEALPMSDAEILSFLT*FQVVQS
Trigger: TGACTGTACTACCTGAAACAAAGTGAGAAAGGACAG...AATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000610179.6
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
3UTR TCA 72 bp TTCAGCAAGTTCAAACAGGACACAAAACCAGTCAACTaGACACAGAGCAGCTCTCTTCAGAAGCACTTCCAA +
Preference number: 3 (lower is better)
Translates to: FSKFKQDTKPVN*TQSSSLQKHFQ
Trigger: TTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTGACTGGTTTTGTGTCCTGTTTGAACTTGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000610179.6
ENST00000621507.1
ENST00000643504.2
3UTR TCA 72 bp ACGCAAGCACCTTCAGCAAGACTTGGAAACTCAAGGTaGGTAATTCTATCAGAGCTGGTAACTAGTACTGAG +
Preference number: 3 (lower is better)
Translates to: TQAPSARLGNSR*VILSELVTSTE
Trigger: CTCAGTACTAGTTACCAGCTCTGATAGAATTACTCACCTTGAGTTTCCAAGTCTTGCTGAAGGTGCTTGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR TCA 72 bp CCAGCTAATCCAAGAGCACAACCAGATTTTTCTGATTaGCTTTCTATCTGCGACAGGATGCTCAAGATCAGG +
Preference number: 3 (lower is better)
Translates to: PANPRAQPDFSD*LSICDRMLKIR
Trigger: CCTGATCTTGAGCATCCTGTCGCAGATAGAAAGTCAATCAGAAAAATCTGGTTGTGCTCTTGGATTAGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CAA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGAGTCCACAGATCCCATaGTGGAAGGTTTCAGGAACC +
Preference number: 3 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKSPQIP*WKVSGT
Trigger: GGTTCCTGAAACCTTCCACAATGGGATCTGTGGACT...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000610179.6
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
3UTR-3UTR CAA 90 bp CTCGTACTAGTTTATCCACTTTGGTGCTATCTCCACGAGATGCCATTTCAAGAGCTGTCCTTTCTCACTTaGTTTCAGGTAGTACAGTCA +
Preference number: 3 (lower is better)
Translates to: LVLVYPLWCYLHEMPFQELSFLT*FQVVQS
Trigger: TGACTGTACTACCTGAAACAAAGTGAGAAAGGACAG...CTCTTGAAATGGCATCTCGTGGAGATAGCACCAAAGTGGATAAACTAGTACGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
3UTR-3UTR CAA 90 bp CAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTTTCTGTCCTTTCTCACTTaGTTTCAGGTAGTACAGTCA +
Preference number: 3 (lower is better)
Translates to: QATYIQQILTLPGHVPLFLSFLT*FQVVQS
Trigger: TGACTGTACTACCTGAAACAAAGTGAGAAAGGACAG...AAAAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000610179.6
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
3UTR-3UTR CAA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTCCTTCCAAAAACTGCTaGTTAAGTTTCAGGTACACA +
Preference number: 3 (lower is better)
Translates to: THEIPLALPTYMHIILSSPSKNC*LSFRYT
Trigger: TGTGTACCTGAAACTTAACAAGCAGTTTTTGGAAGG...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR TCA 72 bp TTGATCAAGCAATCTAGTTCATCCAGTTTGCAAAGCTaGAGATCACCTATCTTTGCGTCCACACAGAGTCAG +
Preference number: 3 (lower is better)
Translates to: LIKQSSSSSLQS*RSPIFASTQSQ
Trigger: CTGACTCTGTGTGGACGCAAAGATAGGTGATCTTCAGCTTTGCAAACTGGATGAACTAGATTGCTTGATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643504.2
3UTR GCA 72 bp CATTCTCAGCTCTGTATCTCCAACCCAAATACCCAGTaGTTATTTGGAGTCTCAAAATCACGTAGTCCACAA +
Preference number: 3 (lower is better)
Translates to: HSQLCISNPNTQ*LFGVSKSRSPQ
Trigger: TTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACAGAGCTGAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR GCA 72 bp TTTCAACTGCCCCTTGGACCAATAATCCAAAGCATATaGCAAAAGCCGCATGGCGATCGTATTAATTCTCAA +
Preference number: 3 (lower is better)
Translates to: FQLPLGPIIQSI*QKPHGDRINSQ
Trigger: TTGAGAATTAATACGATCGCCATGCGGCTTTTGGCATATGCTTTGGATTATTGGTCCAAGGGGCAGTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
3UTR-3UTR CAA 90 bp CCACTTAAGACCTCAGATATAAAAGGTGCATTCTCTCCTTGGGAAAGGCTTTTGCTGTCCTTTCTCACTTaGTTTCAGGTAGTACAGTCA +
Preference number: 3 (lower is better)
Translates to: PLKTSDIKGAFSPWERLLLSFLT*FQVVQS
Trigger: TGACTGTACTACCTGAAACAAAGTGAGAAAGGACAG...CAAAAGCCTTTCCCAAGGAGAGAATGCACCTTTTATATCTGAGGTCTTAAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp AATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCTGTCCTTTCTCACTTaGTTTCAGGTAGTACAGTCA +
Preference number: 3 (lower is better)
Translates to: NTKQATYIQQILTLPGHVLSFLT*FQVVQS
Trigger: TGACTGTACTACCTGAAACAAAGTGAGAAAGGACAG...CACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000610179.6
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
3UTR-3UTR CAA 90 bp AGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACACTCCCCATGAGTTCTTaGACAGACACTTCAGTTCTT +
Preference number: 3 (lower is better)
Translates to: RLNANQSNAQMIAKTILTLPMSS*TDTSVL
Trigger: AAGAACTGAAGTGTCTGTCAAAGAACTCATGGGGAG...TGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp TGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCTGTCCTTTCTCACTTaGTTTCAGGTAGTACAGTCA +
Preference number: 3 (lower is better)
Translates to: CISNPNTQCLFGVSKSRSLSFLT*FQVVQS
Trigger: TGACTGTACTACCTGAAACAAAGTGAGAAAGGACAG...ACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp AAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGCTGTCCTTTCTCACTTaGTTTCAGGTAGTACAGTCA +
Preference number: 3 (lower is better)
Translates to: KIQSRQLIYSKSSHCLDMLSFLT*FQVVQS
Trigger: TGACTGTACTACCTGAAACAAAGTGAGAAAGGACAG...CATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000610179.6
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
3UTR-3UTR CAA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGCTCCCCATGAGTTCTTaGACAGACACTTCAGTTCTT +
Preference number: 3 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKLPMSS*TDTSVL
Trigger: AAGAACTGAAGTGTCTGTCAAAGAACTCATGGGGAG...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR-3UTR CAA 90 bp ACCACCTGGTTAATGTTTTCATTAAGGGCACACATTCTTGCTATTGAGCCAATGACTAGTTTATCCACTTaGGTGCTATCTCCACGAGAT +
Preference number: 3 (lower is better)
Translates to: TTWLMFSLRAHILAIEPMTSLST*VLSPRD
Trigger: ATCTCGTGGAGATAGCACCAAAGTGGATAAACTAGT...CATTGGCTCAATAGCAAGAATGTGTGCCCTTAATGAAAACATTAACCAGGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
3UTR TCA 72 bp AAATTGTTACAAGATGCAAAGATGTACTCCACTTTTTaGCCAAGCATCAGCACCTTTGGCTTACCATCCAGT +
Preference number: 3 (lower is better)
Translates to: KLLQDAKMYSTF*PSISTFGLPSS
Trigger: ACTGGATGGTAAGCCAAAGGTGCTGATGCTTGGTCAAAAAGTGGAGTACATCTTTGCATCTTGTAACAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
3UTR-3UTR CAA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGCCTTCCAAAAACTGCTaGTTAAGTTTCAGGTACACA +
Preference number: 3 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKPSKNC*LSFRYT
Trigger: TGTGTACCTGAAACTTAACAAGCAGTTTTTGGAAGG...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000610179.6
ENST00000621507.1
ENST00000643504.2
3UTR-3UTR CAA 90 bp CTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAATACTAGTTTATCCACTTaGGTGCTATCTCCACGAGAT +
Preference number: 3 (lower is better)
Translates to: LNANQSNAQMIAKTILTNTSLST*VLSPRD
Trigger: ATCTCGTGGAGATAGCACCAAAGTGGATAAACTAGT...ATTTGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
3UTR CCA 72 bp ATGTCCAGATTCATGCCTAAATATCCAGTTGATAACTaGAAAATGCTGGTTCACGGTTCTTTAGTAAAGATT +
Preference number: 3 (lower is better)
Translates to: MSRFMPKYPVDN*KMLVHGSLVKI
Trigger: AATCTTTACTAAAGAACCGTGAACCAGCATTTTCCAGTTATCAACTGGATATTTAGGCATGAATCTGGACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
CDS-3UTR GCA 90 bp AGGCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCACCTCCAGCCCAGCAGTaGTCCCGCAGCGTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: RPWPRSPWEVSKFTGVGPPPAQQ*SRSVWP
Trigger: CGGCCAGACGCTGCGGGAGCACTGCTGGGCTGGAGG...TGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACTGCTCCCGCAGCGTCTaGCCGCTGGTCGTCGGCAGA +
Preference number: 4 (lower is better)
Translates to: HHPSLGPSGFPASIKASHCSRSV*PLVVGR
Trigger: TCTGCCGACGACCAGCGGCCAGACGCTGCGGGAGCA...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp CTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCACACACCCCGCTGCTCCGTaGCGTCCTCGCAGCTCGAGC +
Preference number: 4 (lower is better)
Translates to: LQGTKLPSTQQPSCSAPTHPAAP*RPRSSS
Trigger: GCTCGAGCTGCGAGGACGGCACGGAGCAGCGGGGTG...TGTGGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp GGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTCACGGGTGTCTCTGCTaGCTCCATGCGGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: GAGRLQSLGVFPPGPRLLHGCLC*LHAAGT
Trigger: GGTGCCAGCCGCATGGAGGCAGCAGAGACACCCGTG...AAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp GGGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTCAGGCCACACCACCCTaGAAAGAGTTGCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: GSREAAEPWGFPSWSKAAQATPP*KELPPP
Trigger: GGGTGGGGGCAACTCTTTGCAGGGTGGTGTGGCCTG...AGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CTGCATCTCACGCCCACTGCACACCGTTCCTCTCCATCTGCCCTTCCCTCCCAGCAATGGACGCGTGGGTaGAAGGGCCCGAGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LHLTPTAHRSSPSALPSQQWTRG*KGPSLL
Trigger: GAGGAGGCTCGGGCCCTTCCACCCACGCGTCCATTG...CTGGGAGGGAAGGGCAGATGGAGAGGAACGGTGTGCAGTGGGCGTGAGATGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp GGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTCCAATCCGACGAGGCTaGGGACGGCCCAAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GAGRLQSLGVFPPGPRLLPIRRG*GRPKGL
Trigger: GAGGCCTTTGGGCCGTCCCCAGCCTCGTCGGATTGG...AAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp TCCGCCTCCCAGGTTCACGCCATTCTCCCGCCTCGGGAGCTGGGACAACAGGTGTTGGTGCCTGGGTACTaGAGGAGGGTGAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SASQVHAILPPRELGQQVLVPGY*RRVRPP
Trigger: TGGTGGCCTCACCCTCCTCCAGTACCCAGGCACCAA...CACCTGTTGTCCCAGCTCCCGAGGCGGGAGAATGGCGTGAACCTGGGAGGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp CCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTGGACGAGTCCCACCCCGCTaGTCCGTGCCGTCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: PVVQAGGWWCHLWCLGTGRVPPR*SVPSSQ
Trigger: CTGCGAGGACGGCACGGAGCAGCGGGGTGGGACTCG...TCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp GGGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTGGATCACCTGGGGTCTaGAGTTCGAGACCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GSREAAEPWGFPSWSKAAGSPGV*SSRPAW
Trigger: CCAGGCTGGTCTCGAACTCCAGACCCCAGGTGATCC...AGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCGGTACTGGAGGAGGGTaGGGCCACCAACAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: PWGFPSWSKAALYRPILAGTGGG*GHQQRC
Trigger: GCAGCGCTGTTGGTGGCCTCACCCTCCTCCAGTACC...GGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTCAAGAACCCTGCTGTaGGCCGGGCGCAGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PWGFPSWSKAALYRPILASRTLL*AGRRGS
Trigger: TGAGCCCCTGCGCCCGGCTCACAGCAGGGTTCTTGA...GGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGGCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCAGAACACGGGTGTCTCTaGTGCCTCCATGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RPWPRSPWEVSKFTGVGPEHGCL*CLHAAG
Trigger: GCCAGCCGCATGGAGGCAGCAGAGACACCCGTGTTC...TGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATCCGACGAGACGGAGGTaGCGGAAGCCCTGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: PSWSKAALYRPILAFNSNPTRRR*RKPCRG
Trigger: GCCACGGCAGGGCTTCCGCCACCTCCGTCTCGTCGG...ATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000643504.2
CDS-3UTR CCA 90 bp GCAGAAAGAAAAGCTTCAGCCCCTACCAAGAGCACCTGCAGCCTGGCACTCTCCGGCGGGAGACCGAGGTaGGGCCGCTGTAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AERKASAPTKSTCSLALSGGRPR*GRCKSP
Trigger: TGGGCTCTTACAGCGGCCCCACCTCGGTCTCCCGCC...GGAGAGTGCCAGGCTGCAGGTGCTCTTGGTAGGGGCTGAAGCTTTTCTTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000643504.2
CDS-3UTR CCA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACAGAGCACCTGCAGCCTaGCACTCTCCTCAGGCAGTC +
Preference number: 4 (lower is better)
Translates to: HHPSLGPSGFPASIKASHRAPAA*HSPQAV
Trigger: GACTGCCTGAGGAGAGTGCCAGGCTGCAGGTGCTCT...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AGTAGGGGCACAGACTTGTGCCTCGCTTCCCAGCAGCTGCCCAGTGCCTCTGTCCCACACCCACCTCCCTaGTGTACTTGCCCCCTACAG +
Preference number: 4 (lower is better)
Translates to: SRGTDLCLASQQLPSASVPHPPP*CTCPLQ
Trigger: CTGTAGGGGGCAAGTACACCAGGGAGGTGGGTGTGG...GACAGAGGCACTGGGCAGCTGCTGGGAAGCGAGGCACAAGTCTGTGCCCCTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR TCA 90 bp ACTCTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCAATGAGAGGCTATCGTaGCGGGGCGGGGAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: TLQGTKLPSTQQPSCSAPNERLS*RGGERV
Trigger: CACCCTCTCCCCGCCCCGTCACGATAGCCTCTCATT...GGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR TCA 90 bp AGTGATTGTGATGGAAGCCCCTGCCCTTCCTGTGGCATAGTGTGCAAGCGGGGGCGTGCCTCCGTCCAATaGGAGGCTATCGTGACGGGG +
Preference number: 4 (lower is better)
Translates to: SDCDGSPCPSCGIVCKRGRASVQ*EAIVTG
Trigger: CCCCGTCACGATAGCCTCTCATTGGACGGAGGCACG...CCCCCGCTTGCACACTATGCCACAGGAAGGGCAGGGGCTTCCATCACAATCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR TCA 90 bp CCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTGGAGGTACTGGAGGAGGGTaGGGCCACCAACAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: PVVQAGGWWCHLWCLGTGGTGGG*GHQQRC
Trigger: GCAGCGCTGTTGGTGGCCTCACCCTCCTCCAGTACC...TCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp AGTAGGGGCACAGACTTGTGCCTCGCTTCCCAGCAGCTGCCCAGTGCCTCTGTCTGCACTCCACCTGGGTaGCACAGCGAGACTGTCTCA +
Preference number: 4 (lower is better)
Translates to: SRGTDLCLASQQLPSASVCTPPG*HSETVS
Trigger: TGAGACAGTCTCGCTGTGTCACCCAGGTGGAGTGCA...GACAGAGGCACTGGGCAGCTGCTGGGAAGCGAGGCACAAGTCTGTGCCCCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR TCA 90 bp TCCGCCTCCCAGGTTCACGCCATTCTCCCGCCTCGGGAGCTGGGACAACAGGTGCTGGGACAGGAGAATTaGTTGAACCCGGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: SASQVHAILPPRELGQQVLGQEN*LNPGDR
Trigger: TCTGTCTCCCGGGTTCAATCAATTCTCCTGTCCCAG...CACCTGTTGTCCCAGCTCCCGAGGCGGGAGAATGGCGTGAACCTGGGAGGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp CCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTGGAATGCGGCTGGCACCCTaGCCATCCCTCCCTGACCAC +
Preference number: 4 (lower is better)
Translates to: PVVQAGGWWCHLWCLGTGMRLAP*PSLPDH
Trigger: GTGGTCAGGGAGGGATGGGCAGGGTGCCAGCCGCAT...TCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACGCAGCCATCCTGCTCTaGACCCACACAAGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: HHPSLGPSGFPASIKASHAAILL*THTRSQ
Trigger: TTGGGACCTTGTGTGGGTGCAGAGCAGGATGGCTGC...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGTAGGGGCACAGACTTGTGCCTCGCTTCCCAGCAGCTGCCCAGTGCCTCTGTCACGCAGCAGCCATCCTaGTCTGCACCCACACAAGGT +
Preference number: 4 (lower is better)
Translates to: SRGTDLCLASQQLPSASVTQQPS*SAPTQG
Trigger: ACCTTGTGTGGGTGCAGAGCAGGATGGCTGCTGCGT...GACAGAGGCACTGGGCAGCTGCTGGGAAGCGAGGCACAAGTCTGTGCCCCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp GGGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTCACTGCAGCAACCTCTaGCTCCCAGGTTCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: GSREAAEPWGFPSWSKAAHCSNL*LPGSSN
Trigger: GTTGCTTGAACCTGGGAGGCAGAGGTTGCTGCAGTG...AGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp ACTCTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCCCTCCCTGGTGTACTTaGCCCCTACAGCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: TLQGTKLPSTQQPSCSAPPPWCT*PLQQQP
Trigger: GGGCTGCTGCTGTAGGGGGCAAGTACACCAGGGAGG...GGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACTCACAGCCCCCTTCATaGCCACTAGTGGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: HHPSLGPSGFPASIKASHSQPPS*PLVEGR
Trigger: TCTGCCCTCCACTAGTGGCCATGAAGGGGGCTGTGA...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
3UTR CAA 72 bp CCCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTaGGTGCCTGGGTACTGGAGGAGGGTGAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: PCGTSRRMVVPS*VPGYWRRVRPP
Trigger: TGGTGGCCTCACCCTCCTCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
CDS-3UTR TCA 90 bp CTGCATCTCACGCCCACTGCACACCGTTCCTCTCCATCTGCCCTTCCCTCCCAGCTACTCTTTTCCAGCTaGGTGACCCTGGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: LHLTPTAHRSSPSALPSQLLFSS*VTLGSL
Trigger: AAGGCTGCCCAGGGTCACTCAGCTGGAAAAGAGTAG...CTGGGAGGGAAGGGCAGATGGAGAGGAACGGTGTGCAGTGGGCGTGAGATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR TCA 90 bp GGGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTAACCCTGCTGTGGAGTaGCAGGGTTTACTGAGCACA +
Preference number: 4 (lower is better)
Translates to: GSREAAEPWGFPSWSKAANPAVE*QGLLST
Trigger: TGTGCTCAGTAAACCCTGTCACTCCACAGCAGGGTT...AGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp GGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTGGCCAGCCTCTCCCTaGGCAGTCGTTTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: GAGRLQSLGVFPPGPRLLWPASP*AVVFFA
Trigger: TGCAAAGAAAACGACTGCTCAGGGAGAGGCTGGCCA...AAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp ACTCTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCACTCCTGACCTCAGGTaGTCCACCCGCCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: TLQGTKLPSTQQPSCSAPTPDLR*STRLGL
Trigger: AAGGCCAAGGCGGGTGGATCACCTGAGGTCAGGAGT...GGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCACCAGTGGGCCGCCTCTTCCGTTaGGCCAACGCGCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PLAYHPVLTSVTVRAPPVGRLFR*ANAQEA
Trigger: GGCTTCCTGCGCGTTGGCGCAACGGAAGAGGCGGCC...CACTGGTGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp CCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATATGCGGCTGGCACCCTaGCCATCCCTCCCTGACCAC +
Preference number: 4 (lower is better)
Translates to: PSWSKAALYRPILAFNSNMRLAP*PSLPDH
Trigger: GTGGTCAGGGAGGGATGGGCAGGGTGCCAGCCGCAT...ATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTGGAGAACACGGGTGTCTCTaGTGCCTCCATGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PVVQAGGWWCHLWCLGTGEHGCL*CLHAAG
Trigger: GCCAGCCGCATGGAGGCAGCAGAGACACCCGTGTTC...TCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACCATATCAGTTCCCCTTaGCCCAGCTGGAACACGGGT +
Preference number: 4 (lower is better)
Translates to: HHPSLGPSGFPASIKASHHISSP*PSWNTG
Trigger: ACCCGTGTTCCAGCTGGGGCAAGGGGAACTGATATG...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACGGCCAGCCACGATCTTaGAACCAATTGTGGGCAACC +
Preference number: 4 (lower is better)
Translates to: HHPSLGPSGFPASIKASHGQPRS*NQLWAT
Trigger: GGTTGCCCACAATTGGTTGCAAGATCGTGGCTGGCC...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp TCCGCCTCCCAGGTTCACGCCATTCTCCCGCCTCGGGAGCTGGGACAACAGGTGCTCCCTTACCCCAAATaGCCAGCTAATCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SASQVHAILPPRELGQQVLPYPK*PANPRA
Trigger: TGCTCTTGGATTAGCTGGGCATTTGGGGTAAGGGAG...CACCTGTTGTCCCAGCTCCCGAGGCGGGAGAATGGCGTGAACCTGGGAGGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp GCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCCTTCCTTTCTCACCTaGACCACGGTCACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: AEPWGFPSWSKAALYRPIPSFLT*TTVTAP
Trigger: GGGGGCTGTGACCGTGGTCCAGGTGAGAAAGGAAGG...GATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACGGGATCCCCATGTGCTaGGGAGTGTGCTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: HHPSLGPSGFPASIKASHGIPMC*GVCFHL
Trigger: CAAATGGAAGCACACTCCCCAGCACATGGGGATCCC...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR TCA 90 bp AGGCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCAGGCAGGAGAATTGCTTaGGCCTGGAAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: RPWPRSPWEVSKFTGVGPGRRIA*AWKAEV
Trigger: AACCTCTGCCTTCCAGGCTCAAGCAATTCTCCTGCC...TGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp GGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTAGACAGAAGTTGCAGTaGGCCAAGATCCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: GAGRLQSLGVFPPGPRLLRQKLQ*AKIPTA
Trigger: TGCAGTGGGGATCTTGGCTCACTGCAACTTCTGTCT...AAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp GCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCCTACCAAGAGCACCTaGAGCCTGGCACTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: AEPWGFPSWSKAALYRPIPTKST*SLALSS
Trigger: TGAGGAGAGTGCCAGGCTGCAGGTGCTCTTGGTAGG...GATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGTAGGGGCACAGACTTGTGCCTCGCTTCCCAGCAGCTGCCCAGTGCCTCTGTCGGTGATGCTAATGACTaGTTGGGGAGACCCAGGACT +
Preference number: 4 (lower is better)
Translates to: SRGTDLCLASQQLPSASVGDAND*LGRPRT
Trigger: AGTCCTGGGTCTCCCCAAGCAGTCATTAGCATCACC...GACAGAGGCACTGGGCAGCTGCTGGGAAGCGAGGCACAAGTCTGTGCCCCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp TCCAGATTGTGCTGCTTCTGCCAGTGTACCCACTTGCATCAGAACAGTCCGCCCCAGGCCACACCACCCTaGAAAGAGTTGCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: SRLCCFCQCTHLHQNSPPQATPP*KELPPP
Trigger: GGGTGGGGGCAACTCTTTGCAGGGTGGTGTGGCCTG...GGGCGGACTGTTCTGATGCAAGTGGGTACACTGGCAGAAGCAGCACAATCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp ACTCTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCTCACCCAGGCTGGAGTaGAGTGCAGCAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: TLQGTKLPSTQQPSCSAPSPRLE*SAAISA
Trigger: AGCCGAGATTGCTGCACTGCACTCCAGCCTGGGTGA...GGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000497424.5
CDS-3UTR CCA 90 bp GCAGAAAGAAAAGCTTCAGCCCCTACCAAGAGCACCTGCAGCCTGGCACTCTCCGCCCATGTGCAGAGGTaGCCACGCCTAGTGGAACAG +
Preference number: 4 (lower is better)
Translates to: AERKASAPTKSTCSLALSAHVQR*PRLVEQ
Trigger: CTGTTCCACTAGGCGTGGCCACCTCTGCACATGGGC...GGAGAGTGCCAGGCTGCAGGTGCTCTTGGTAGGGGCTGAAGCTTTTCTTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATCACCAACAGCGCTGCTaGCAGCAGAGGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PSWSKAALYRPILAFNSNHQQRC*QQRRAE
Trigger: CTCTGCCCTCCTCTGCTGCCAGCAGCGCTGTTGGTG...ATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp GGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTGTACAAGCAGGAGGATaGTGGTGCCATCTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GAGRLQSLGVFPPGPRLLVQAGG*WCHLWC
Trigger: GCACCAAAGATGGCACCACCATCCTCCTGCTTGTAC...AAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAGGCACCCCCTGCCCTTCCTGTaGCATAGTGTGCAAGCGGGG +
Preference number: 4 (lower is better)
Translates to: KLKARQKGTSTASSQLRHPLPFL*HSVQAG
Trigger: CCCCGCTTGCACACTATGCCACAGGAAGGGCAGGGG...GTGCCTGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp TCCGCCTCCCAGGTTCACGCCATTCTCCCGCCTCGGGAGCTGGGACAACAGGTGTTTCGTCTTGTAGTTTaGCCCTCGGGTTTCCTCACT +
Preference number: 4 (lower is better)
Translates to: SASQVHAILPPRELGQQVFRLVV*PSGFLT
Trigger: AGTGAGGAAACCCGAGGGCCAAACTACAAGACGAAA...CACCTGTTGTCCCAGCTCCCGAGGCGGGAGAATGGCGTGAACCTGGGAGGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp GGGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTACCAGTGGTGATGTGTaGCTGCAACTGTTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: GSREAAEPWGFPSWSKAATSGDV*LQLLWS
Trigger: TGACCACAACAGTTGCAGCCACACATCACCACTGGT...AGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR TCA 90 bp CCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCAAACCAGATTCTCCCTaGTCCCCTGAGGGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: PWGFPSWSKAALYRPILAKPDSP*SPEGVS
Trigger: TGACACCCCCTCAGGGGATCAGGGAGAATCTGGTTT...GGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACAGACAGTCCCGGGTTTaGGTCCAGCTCTACTCTTTT +
Preference number: 4 (lower is better)
Translates to: HHPSLGPSGFPASIKASHRQSRV*VQLYSF
Trigger: AAAAGAGTAGAGCTGGACTCAAACCCGGGACTGTCT...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp GCAGAAAGAAAAGCTTCAGCCCCTACCAAGAGCACCTGCAGCCTGGCACTCTCCTGCACTCCACCTGGGTaGCACAGCGAGACTGTCTCA +
Preference number: 4 (lower is better)
Translates to: AERKASAPTKSTCSLALSCTPPG*HSETVS
Trigger: TGAGACAGTCTCGCTGTGTCACCCAGGTGGAGTGCA...GGAGAGTGCCAGGCTGCAGGTGCTCTTGGTAGGGGCTGAAGCTTTTCTTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp GCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCGCAAGAGGGCTCTGCTaGGTGAGAACTGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: AEPWGFPSWSKAALYRPIARGLC*VRTEMR
Trigger: CCTCATCTCAGTTCTCACTCAGCAGAGCCCTCTTGC...GATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp AAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAGGCACACTCCTGACCTCAGGTaGTCCACCCGCCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: KLKARQKGTSTASSQLRHTPDLR*STRLGL
Trigger: AAGGCCAAGGCGGGTGGATCACCTGAGGTCAGGAGT...GTGCCTGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CCTGAGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTAGCCCCCTGGCCTCCCTaGGCTCTGCAAACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PEQSFSLQLPPSLLNSRLAPWPP*ALQTAG
Trigger: TCCAGCTGTTTGCAGAGCTCAGGGAGGCCAGGGGGC...TAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp GGGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTAGCAAATCCTCACACTaGCTGGACATGTGCCACTTT +
Preference number: 4 (lower is better)
Translates to: GSREAAEPWGFPSWSKAASKSSH*LDMCHF
Trigger: AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCT...AGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp GGCTGTGAAATGAATGCCAGATTCGGTGGCATGGGATTCACTGGTGGCCTATCAATGCGGCTGGCACCCTaGCCATCCCTCCCTGACCAC +
Preference number: 4 (lower is better)
Translates to: GCEMNARFGGMGFTGGLSMRLAP*PSLPDH
Trigger: GTGGTCAGGGAGGGATGGGCAGGGTGCCAGCCGCAT...TGATAGGCCACCAGTGAATCCCATGCCACCGAATCTGGCATTCATTTCACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp GCAGAAAGAAAAGCTTCAGCCCCTACCAAGAGCACCTGCAGCCTGGCACTCTCCGCAGGAGGATGGTGGTaGCATCTTTGGTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: AERKASAPTKSTCSLALSAGGWW*HLWCLG
Trigger: ACCCAGGCACCAAAGATGGCACCACCATCCTCCTGC...GGAGAGTGCCAGGCTGCAGGTGCTCTTGGTAGGGGCTGAAGCTTTTCTTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp GGGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTCTGTCTCAAAAACCCTaGTGTGGAGTGACAGGGTTT +
Preference number: 4 (lower is better)
Translates to: GSREAAEPWGFPSWSKAALSQKP*CGVTGF
Trigger: AAACCCTGTCACTCCACAGCAGGGTTTTTGAGACAG...AGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTGGACTGGAAGGCAGAGGTTaGAGTGAGCTGAGATCGCCC +
Preference number: 4 (lower is better)
Translates to: PVVQAGGWWCHLWCLGTGLEGRG*SELRSP
Trigger: GGGCGATCTCAGCTCACTGCAACCTCTGCCTTCCAG...TCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp GGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTAGCAGTCGTTTTCTTTaGAGCTTCCTCCGTCACTGC +
Preference number: 4 (lower is better)
Translates to: GAGRLQSLGVFPPGPRLLSSRFL*SFLRHC
Trigger: GCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCT...AAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp GCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCGGCCAGCCACGATCTTaGAACCAATTGTGGGCAACC +
Preference number: 4 (lower is better)
Translates to: AEPWGFPSWSKAALYRPIGQPRS*NQLWAT
Trigger: GGTTGCCCACAATTGGTTGCAAGATCGTGGCTGGCC...GATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp GGAGGAAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCATTCCTGTGTGGCCGTTaGTGCTCTCCTCACCACCCC +
Preference number: 4 (lower is better)
Translates to: GGSSKRGRRGHQQRLPNSFLCGR*CSPHHP
Trigger: GGGGTGGTGAGGAGAGCAGCAACGGCCACACAGGAA...TGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp TCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCAGGGAGCAGCACCCTGCACTGCAGCAACCTCTaGCTCCCAGGTTCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: SPWEVSKFTGVGPGSSTLHCSNL*LPGSSN
Trigger: GTTGCTTGAACCTGGGAGGCAGAGGTTGCTGCAGTG...CAGGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp GGGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTCAGCAGACTTGTTTGTaGTTTGGGGGAACTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GSREAAEPWGFPSWSKAAQQTCL*FGGTLF
Trigger: GAAGAGAGTTCCCCCAAAGCACAAACAAGTCTGCTG...AGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp CCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATAGGGGCACAGACTTGTaGCTCGCTTCCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PSWSKAALYRPILAFNSNRGTDL*LASQQL
Trigger: CAGCTGCTGGGAAGCGAGGCACAAGTCTGTGCCCCT...ATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACTTACCCAGACTGGAGTaGAGTGGCACCATTGTAGCT +
Preference number: 4 (lower is better)
Translates to: HHPSLGPSGFPASIKASHLPRLE*SGTIVA
Trigger: AGCTACAATGGTGCCACTGCACTCCAGTCTGGGTAA...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp GTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAAGGTGCCTGGACAGCTaGTGGCCCCTCCCCTACCTT +
Preference number: 4 (lower is better)
Translates to: VFPPGPRLLCTGPSLPSTRCLDS*WPLPYL
Trigger: AAGGTAGGGGAGGGGCCAGCAGCTGTCCAGGCACCT...TGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp CCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCAGCCACAGCCCAGCCTaGCAGTCCAAACCTCTCATA +
Preference number: 4 (lower is better)
Translates to: PWGFPSWSKAALYRPILASHSPA*QSKPLI
Trigger: TATGAGAGGTTTGGACTGCCAGGCTGGGCTGTGGCT...GGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAGGCACTTGGTGCCTGGGTACTaGAGGAGGGTGAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: KLKARQKGTSTASSQLRHLVPGY*RRVRPP
Trigger: TGGTGGCCTCACCCTCCTCCAGTACCCAGGCACCAA...GTGCCTGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CTGGAGCTCAGAGGTAAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTCAGAGGGGCAGGCCCTaGCCTCGGTCTCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: LELRGKGWLKCSLEISQGQRGRP*PRSPWE
Trigger: TTCCCATGGAGACCGAGGCCAGGGCCTGCCCCTCTG...ACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTTACCTCTGAGCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp GCGACAGGATGCTCAAGATCAGGCTCTGTAGCTGACAGCAGTGGCACAGGCCTCGAATGCAGAGTACAGTaGAGTCTGAAGCCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: ATGCSRSGSVADSSGTGLECRVQ*SLKPPG
Trigger: GCCAGGGGGCTTCAGACTCCACTGTACTCTGCATTC...GAGGCCTGTGCCACTGCTGTCAGCTACAGAGCCTGATCTTGAGCATCCTGTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACAAAAGAAAATGCTTCTaGTCGGGCGCGATGGCTCAC +
Preference number: 4 (lower is better)
Translates to: HHPSLGPSGFPASIKASHKRKCF*SGAMAH
Trigger: GTGAGCCATCGCGCCCGACCAGAAGCATTTTCTTTT...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR TCA 90 bp GCAGAAAGAAAAGCTTCAGCCCCTACCAAGAGCACCTGCAGCCTGGCACTCTCCCATGTTTCCAAAGCTTaGAGCCACAGCCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AERKASAPTKSTCSLALSHVSKA*SHSPAW
Trigger: CCAGGCTGGGCTGTGGCTTCAAGCTTTGGAAACATG...GGAGAGTGCCAGGCTGCAGGTGCTCTTGGTAGGGGCTGAAGCTTTTCTTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp GTGGCCCTGCTGACTCATGTTAGTCCTCCAGATTGTGCTGCTTCTGCCAGTGTACAGTGGACAACCTCCTaGACGCAGCACAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: VALLTHVSPPDCAASASVQWTTS*TQHSRG
Trigger: GCCTCTGCTGTGCTGCGTTCAGGAGGTTGTCCACTG...TACACTGGCAGAAGCAGCACAATCTGGAGGACTAACATGAGTCAGCAGGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp ACTCTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCAACCCTGCTGTGGAGTaGCAGGGTTTACTGAGCACA +
Preference number: 4 (lower is better)
Translates to: TLQGTKLPSTQQPSCSAPNPAVE*QGLLST
Trigger: TGTGCTCAGTAAACCCTGTCACTCCACAGCAGGGTT...GGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp GTCCGCCCACTACCCAAGGAAATTCTGCCAAGAAAAGAAGCCCTGTCTCTCCAGAGGCAGAGGTTGCAGTaGGCTGAGATCGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: VRPLPKEILPRKEALSLQRQRLQ*AEIAPL
Trigger: CAGTGGGGCGATCTCAGCTCACTGCAACCTCTGCCT...CTGGAGAGACAGGGCTTCTTTTCTTGGCAGAATTTCCTTGGGTAGTGGGCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTAGGTGGCGGAAGCCCTaGCGTGGCGCTCCATGGGCG +
Preference number: 4 (lower is better)
Translates to: THEIPLALPTYMHIILSSRWRKP*RGAPWA
Trigger: CGCCCATGGAGCGCCACGGCAGGGCTTCCGCCACCT...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000643504.2
CDS-3UTR GCA 90 bp CCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTGGACTCCTGGTCCAAGGCTaGTTTGTACAGGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: PVVQAGGWWCHLWCLGTGLLVQG*FVQAHP
Trigger: AGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAG...TCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATTGGTGCCATCTTTGGTaGCTGGGTACTGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PSWSKAALYRPILAFNSNWCHLW*LGTGGG
Trigger: CCCTCCTCCAGTACCCAGGCACCAAAGATGGCACCA...ATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTGGACACTGCAGCAACCTCTaGCTCCCAGGTTCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: PVVQAGGWWCHLWCLGTGHCSNL*LPGSSN
Trigger: GTTGCTTGAACCTGGGAGGCAGAGGTTGCTGCAGTG...TCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTCCGACGAGACGGAGGTaGCGGAAGCCCTGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: SRQLIYSKSSHCLDMCHFPTRRR*RKPCRG
Trigger: GCCACGGCAGGGCTTCCGCCACCTCCGTCTCGTCGG...AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000643504.2
CDS-3UTR CCA 90 bp AGTCAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGCCGCGGAACTCTCCTaGGGCGACCCCGAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SQLNTEQLSSEALPMSDAAAELS*GDPESH
Trigger: GTGGGACTCGGGGTCGCCCCAGGAGAGTTCCGCGGC...TGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp GTCCGCCCACTACCCAAGGAAATTCTGCCAAGAAAAGAAGCCCTGTCTCTCCAGTCCCCTTGCCCCAGCTaGAACACGGGTGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VRPLPKEILPRKEALSLQSPCPS*NTGVSA
Trigger: AGCAGAGACACCCGTGTTCCAGCTGGGGCAAGGGGA...CTGGAGAGACAGGGCTTCTTTTCTTGGCAGAATTTCCTTGGGTAGTGGGCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCATGCTAATGACTGCTTaGGGAGACCCAGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: PWGFPSWSKAALYRPILAMLMTA*GDPGLR
Trigger: CCTCAGTCCTGGGTCTCCCCAAGCAGTCATTAGCAT...GGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp GTGGCCCTGCTGACTCATGTTAGTCCTCCAGATTGTGCTGCTTCTGCCAGTGTACCTTCCTTTCTCACCTaGACCACGGTCACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: VALLTHVSPPDCAASASVPSFLT*TTVTAP
Trigger: GGGGGCTGTGACCGTGGTCCAGGTGAGAAAGGAAGG...TACACTGGCAGAAGCAGCACAATCTGGAGGACTAACATGAGTCAGCAGGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp GGAGGAAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAAAACCAGATTCTCCCTaGTCCCCTGAGGGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: GGSSKRGRRGHQQRLPNSKPDSP*SPEGVS
Trigger: TGACACCCCCTCAGGGGATCAGGGAGAATCTGGTTT...TGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACGCAAGGGCTGCATGGTaGCCCACGTCGAGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: PPCFAHLHAYHSQLCISNARAAW*PTSSSG
Trigger: TCCACTGCTCGACGTGGGTCACCATGCAGCCCTTGC...GTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CCTGAGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTAAGGCAGAGGTTGCAGTaGGCTGAGATCGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: PEQSFSLQLPPSLLNSRLRQRLQ*AEIAPL
Trigger: CAGTGGGGCGATCTCAGCTCACTGCAACCTCTGCCT...TAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp GGAGGAAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAGCAAGAGGGCTCTGCTaGGTGAGAACTGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: GGSSKRGRRGHQQRLPNSARGLC*VRTEMR
Trigger: CCTCATCTCAGTTCTCACTCAGCAGAGCCCTCTTGC...TGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp AGGCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCATCATGTGGATATGCCTaGATGTCCAGCGTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: RPWPRSPWEVSKFTGVGPSCGYA*MSSVSS
Trigger: TGAACTGACGCTGGACATTCAGGCATATCCACATGA...TGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACGTTTATCCACTTTGGTaGTATCTCCACGAGATGCCA +
Preference number: 4 (lower is better)
Translates to: HHPSLGPSGFPASIKASHVYPLW*YLHEMP
Trigger: TGGCATCTCGTGGAGATAGCACCAAAGTGGATAAAC...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGGCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCAAGCAAATCCTCACACTaGCTGGACATGTGCCACTTT +
Preference number: 4 (lower is better)
Translates to: RPWPRSPWEVSKFTGVGPSKSSH*LDMCHF
Trigger: AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCT...TGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGTGATTGTGATGGAAGCCCCTGCCCTTCCTGTGGCATAGTGTGCAAGCGGGGGAGTGCAGATTGCCTTTaGGTCCACACAGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SDCDGSPCPSCGIVCKRGSADCL*VHTESG
Trigger: ACCTGACTCTGTGTGGACGCAAAGGCAATCTGCACT...CCCCCGCTTGCACACTATGCCACAGGAAGGGCAGGGGCTTCCATCACAATCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp CCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATGCCAGTGTACCCACTTaGATCAGAACAGTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: PSWSKAALYRPILAFNSNASVPT*IRTVRP
Trigger: TGGGCGGACTGTTCTGATGCAAGTGGGTACACTGGC...ATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CTCATCATGTTTCCAAAGCTTGAAGCCACAGCCCAGCCTGGCAGTCCAAACCTCCCTACCAAGAGCACCTaGAGCCTGGCACTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LIMFPKLEATAQPGSPNLPTKST*SLALSS
Trigger: TGAGGAGAGTGCCAGGCTGCAGGTGCTCTTGGTAGG...GAGGTTTGGACTGCCAGGCTGGGCTGTGGCTTCAAGCTTTGGAAACATGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643504.2
CDS-3UTR GCA 90 bp GTCCGCCCACTACCCAAGGAAATTCTGCCAAGAAAAGAAGCCCTGTCTCTCCAGGCAGGAGGATGGTGGTaGCATCTTTGGTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VRPLPKEILPRKEALSLQAGGWW*HLWCLG
Trigger: ACCCAGGCACCAAAGATGGCACCACCATCCTCCTGC...CTGGAGAGACAGGGCTTCTTTTCTTGGCAGAATTTCCTTGGGTAGTGGGCGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CTGGAGCTCAGAGGTAAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGGGAACAGCAAGGGCTaGATGGTGACCCACGTCGAG +
Preference number: 4 (lower is better)
Translates to: LELRGKGWLKCSLEISQGGNSKG*MVTHVE
Trigger: CTCGACGTGGGTCACCATGCAGCCCTTGCTGTTCCC...ACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTTACCTCTGAGCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp TCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCAGGGAGCAGCACCCTGACAAATGAGCCCAGGTaGCCTCTTGTATCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SPWEVSKFTGVGPGSSTLTNEPR*PLVSLL
Trigger: GAGGAGAGATACAAGAGGGCACCTGGGCTCATTTGT...CAGGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp GTCCGCCCACTACCCAAGGAAATTCTGCCAAGAAAAGAAGCCCTGTCTCTCCAGCTTCTCAGCTCCCTTTaGCAGTCCCAAGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VRPLPKEILPRKEALSLQLLSSL*QSQAWW
Trigger: CCACCAGGCTTGGGACTGGCAAAGGGAGCTGAGAAG...CTGGAGAGACAGGGCTTCTTTTCTTGGCAGAATTTCCTTGGGTAGTGGGCGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp CCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATCTCAACTCACTATGTTaGCCAGGCTGGCCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: PSWSKAALYRPILAFNSNLNSLC*PGWPPH
Trigger: GTGAGGAGGCCAGCCTGGGCAACATAGTGAGTTGAG...ATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp CAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTTTCCGACGAGACGGAGGTaGCGGAAGCCCTGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: QATYIQQILTLPGHVPLFPTRRR*RKPCRG
Trigger: GCCACGGCAGGGCTTCCGCCACCTCCGTCTCGTCGG...AAAAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000643504.2
CDS-3UTR CCA 90 bp CTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTAGGCTTTCGACGCGCTaGCGGGAGACCGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LNTEQLSSEALPMSDAEIRLSTR*RETEVG
Trigger: CCCCACCTCGGTCTCCCGCCAGCGCGTCGAAAGCCT...AATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CCA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTAGGCTTTCGACGCGCTaGCGGGAGACCGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: THEIPLALPTYMHIILSSRLSTR*RETEVG
Trigger: CCCCACCTCGGTCTCCCGCCAGCGCGTCGAAAGCCT...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000643504.2
CDS-3UTR CCA 90 bp CAAGAAAAGAAGCCCTGTCTCTCCAGACATTCATTCCCAGGATTTAGTGTAAAGGGCGGCGCCGCCCAATaGACGCGTGGGTGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: QEKKPCLSRHSFPGFSVKGGAAQ*TRGWKG
Trigger: GCCCTTCCACCCACGCGTCCATTGGGCGGCGCCGCC...CTTTACACTAAATCCTGGGAATGAATGTCTGGAGAGACAGGGCTTCTTTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp GGCTGTGAAATGAATGCCAGATTCGGTGGCATGGGATTCACTGGTGGCCTATCAGCCCATGTGCAGAGGTaGCCACGCCTAGTGGAACAG +
Preference number: 4 (lower is better)
Translates to: GCEMNARFGGMGFTGGLSAHVQR*PRLVEQ
Trigger: CTGTTCCACTAGGCGTGGCCACCTCTGCACATGGGC...TGATAGGCCACCAGTGAATCCCATGCCACCGAATCTGGCATTCATTTCACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCACCAACAGCGCTGCTaGCAGCAGAGGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PPCFAHLHAYHSQLCISNHQQRC*QQRRAE
Trigger: CTCTGCCCTCCTCTGCTGCCAGCAGCGCTGTTGGTG...GTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATATGGATCACCTGGGGTCTaGAGTTCGAGACCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLVQGCFVQAHPCLQQQYGSPGV*SSRPAW
Trigger: CCAGGCTGGTCTCGAACTCCAGACCCCAGGTGATCC...ATATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTGGACCAGATTCGGTGGCATaGGATTCACTGGTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: PVVQAGGWWCHLWCLGTGPDSVA*DSLVAY
Trigger: ATAGGCCACCAGTGAATCCCATGCCACCGAATCTGG...TCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CTGGAGCTCAGAGGTAAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGCCCCTCCCCTACCTTaGCCAGTTCCAAGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: LELRGKGWLKCSLEISQGAPPLP*PVPSED
Trigger: GTCCTCACTTGGAACTGGCCAAGGTAGGGGAGGGGC...ACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTTACCTCTGAGCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316562.9
3UTR CAA 72 bp GTTTGTGCTTTGGGGGAACTCTCTTCTCAGCTCCCTTaGCCAGTCCCAAGCCTGGTGGATCTGCATCTCACG +
Preference number: 4 (lower is better)
Translates to: VCALGELSSQLP*PVPSLVDLHLT
Trigger: CGTGAGATGCAGATCCACCAGGCTTGGGACTGGCAAAGGGAGCTGAGAAGAGAGTTCCCCCAAAGCACAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
CDS-3UTR TCA 90 bp GGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTCAGAAGCACTTCCAATaGGTGATGCAGAGATTTCAA +
Preference number: 4 (lower is better)
Translates to: GAGRLQSLGVFPPGPRLLQKHFQ*VMQRFQ
Trigger: TTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTG...AAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGGCAAGGGCTGCATGGTaGCCCACGTCGAGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: QLNTEQLSSEALPMSDAEARAAW*PTSSSG
Trigger: TCCACTGCTCGACGTGGGTCACCATGCAGCCCTTGC...CTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp GTGGCCCTGCTGACTCATGTTAGTCCTCCAGATTGTGCTGCTTCTGCCAGTGTACACGTAGTCCACAAATaGGCCCAGGTGCCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: VALLTHVSPPDCAASASVHVVHK*AQVPSC
Trigger: ACAAGAGGGCACCTGGGCTCATTTGTGGACTACGTG...TACACTGGCAGAAGCAGCACAATCTGGAGGACTAACATGAGTCAGCAGGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp GTGGCCCTGCTGACTCATGTTAGTCCTCCAGATTGTGCTGCTTCTGCCAGTGTATGGCCAGCCTCTCCCTaGGCAGTCGTTTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: VALLTHVSPPDCAASASVWPASP*AVVFFA
Trigger: TGCAAAGAAAACGACTGCTCAGGGAGAGGCTGGCCA...TACACTGGCAGAAGCAGCACAATCTGGAGGACTAACATGAGTCAGCAGGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp AGTAGGGGCACAGACTTGTGCCTCGCTTCCCAGCAGCTGCCCAGTGCCTCTGTCCTTGGAAACTCAAGGTaGGTAATTCTATCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SRGTDLCLASQQLPSASVLGNSR*VILSEL
Trigger: CAGCTCTGATAGAATTACTCACCTTGAGTTTCCAAG...GACAGAGGCACTGGGCAGCTGCTGGGAAGCGAGGCACAAGTCTGTGCCCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp CCACTTAAGACCTCAGATATAAAAGGTGCATTCTCTCCTTGGGAAAGGCTTTTGAGGTGGCGGAAGCCCTaGCGTGGCGCTCCATGGGCG +
Preference number: 4 (lower is better)
Translates to: PLKTSDIKGAFSPWERLLRWRKP*RGAPWA
Trigger: CGCCCATGGAGCGCCACGGCAGGGCTTCCGCCACCT...CAAAAGCCTTTCCCAAGGAGAGAATGCACCTTTTATATCTGAGGTCTTAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000643504.2
CDS-3UTR GCA 90 bp CAAGAAAAGAAGCCCTGTCTCTCCAGACATTCATTCCCAGGATTTAGTGTAAAGGTCGATCCCGCCTCGTaGCCTCAGCCGAGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: QEKKPCLSRHSFPGFSVKVDPAS*PQPRPR
Trigger: TCGGGGCCTCGGCTGAGGGCACGAGGCGGGATCGAC...CTTTACACTAAATCCTGGGAATGAATGTCTGGAGAGACAGGGCTTCTTTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000643504.2
CDS-3UTR GCA 90 bp GGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTATAATCCAAAGCATATaGCAAAAGCCGCATGGCGAT +
Preference number: 4 (lower is better)
Translates to: GAGRLQSLGVFPPGPRLLIIQSI*QKPHGD
Trigger: ATCGCCATGCGGCTTTTGGCATATGCTTTGGATTAT...AAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCACAAGATTGTGCTGCTTCTaGCAGTGTACCCACTTGCAT +
Preference number: 4 (lower is better)
Translates to: LQGTKLPSTQQPSCSAPTRLCCF*QCTHLH
Trigger: ATGCAAGTGGGTACACTGGCAGAAGCAGCACAATCT...TGTGGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp GTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACACTCCTGGTCCAAGGCTaGTTTGTACAGGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: VFPPGPRLLCTGPSLPSTLLVQG*FVQAHP
Trigger: AGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAG...TGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTCACGGGTGTCTCTGCTaGCTCCATGCGGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: SRQLIYSKSSHCLDMCHFHGCLC*LHAAGT
Trigger: GGTGCCAGCCGCATGGAGGCAGCAGAGACACCCGTG...AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGTCAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCACACGGGTGTCTCTGCTaGCTCCATGCGGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: SQLNTEQLSSEALPMSDAHGCLC*LHAAGT
Trigger: GGTGCCAGCCGCATGGAGGCAGCAGAGACACCCGTG...TGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGGCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCACTTTGCCCACCTACATaGATATCATTCTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RPWPRSPWEVSKFTGVGPLCPPT*ISFSAL
Trigger: CAGAGCTGAGAATGATATGCATGTAGGTGGGCAAAG...TGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTGGAAGCAGTCGTTTTCTTTaGAGCTTCCTCCGTCACTGC +
Preference number: 4 (lower is better)
Translates to: PVVQAGGWWCHLWCLGTGSSRFL*SFLRHC
Trigger: GCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCT...TCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGCCACGATCTTGCAACCAATTGTGGGCAACCTCAATTCAGATGCCTAGAGAGCCTGTGTGGCCGTTGCTaGTCTCCTCACCACCCCTCA +
Preference number: 4 (lower is better)
Translates to: SHDLATNCGQPQFRCLESLCGRC*SPHHPS
Trigger: TGAGGGGTGGTGAGGAGAGCAGCAACGGCCACACAG...GCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp ACTCTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCCTATCTGCGACAGGATaGTCAAGATCAGGCTCTGTA +
Preference number: 4 (lower is better)
Translates to: TLQGTKLPSTQQPSCSAPLSATG*SRSGSV
Trigger: TACAGAGCCTGATCTTGAGCATCCTGTCGCAGATAG...GGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp AACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAAGGCTTTCGACGCGCTaGCGGGAGACCGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: NTEQLSSEALPMSDAEISRLSTR*RETEVG
Trigger: CCCCACCTCGGTCTCCCGCCAGCGCGTCGAAAGCCT...TGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CCA 90 bp CTGCATCTCACGCCCACTGCACACCGTTCCTCTCCATCTGCCCTTCCCTCCCAGCTAGTTTATCCACTTTaGTGCTATCTCCACGAGATG +
Preference number: 4 (lower is better)
Translates to: LHLTPTAHRSSPSALPSQLVYPL*CYLHEM
Trigger: CATCTCGTGGAGATAGCACCAAAGTGGATAAACTAG...CTGGGAGGGAAGGGCAGATGGAGAGGAACGGTGTGCAGTGGGCGTGAGATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp GGGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTTTCTGTTAAATTGTaGGAACAGCAAGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: GSREAAEPWGFPSWSKAAFSVKL*EQQGLH
Trigger: ATGCAGCCCTTGCTGTTCCCACAATTTAACAGAAAA...AGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp GCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCTGGCTGCAACTGTTGTaGTCACTTAGGCAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: AEPWGFPSWSKAALYRPIWLQLL*SLRQAL
Trigger: AAGAGCTTGCCTAAGTGACCACAACAGTTGCAGCCA...GATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316562.9
3UTR CAA 72 bp CCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTaGCCTTCAACAGCAATATGGGCACCACTTAAGACC +
Preference number: 4 (lower is better)
Translates to: PPGPRLLCTGPS*PSTAIWAPLKT
Trigger: GGTCTTAAGTGGTGCCCATATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CAA 72 bp GAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTaGTACAGGCCCATCCTTGCCTTCAACAGCAATATG +
Preference number: 4 (lower is better)
Translates to: EPWGFPSWSKAA*YRPILAFNSNM
Trigger: CATATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CAA 72 bp GTGGCTTCCCAGCTTCCATCAAGGCCAGCCACGATCTaGCAACCAATTGTGGGCAACCTCAATTCAGATGCC +
Preference number: 4 (lower is better)
Translates to: VASQLPSRPATI*QPIVGNLNSDA
Trigger: GGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCTGGCCTTGATGGAAGCTGGGAAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
3UTR CAA 72 bp TCTGTGACTGTAAGGGCCCCACCAGTGTCAGCAGACTaGTTTGTGCTTTGGGGGAACTCTCTTCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SVTVRAPPVSAD*FVLWGNSLLSS
Trigger: GGAGCTGAGAAGAGAGTTCCCCCAAAGCACAAACAAGTCTGCTGACACTGGTGGGGCCCTTACAGTCACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
CDS-3UTR TCA 90 bp ACTCTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCTCCAGTTTGCAAAGCTaGAGATCACCTATCTTTGCG +
Preference number: 4 (lower is better)
Translates to: TLQGTKLPSTQQPSCSAPSSLQS*RSPIFA
Trigger: CGCAAAGATAGGTGATCTTCAGCTTTGCAAACTGGA...GGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643504.2
CDS-3UTR TCA 90 bp CCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCAAAGTAATAGCACTGTaGCCGTCCATTGAATCCGAC +
Preference number: 4 (lower is better)
Translates to: PWGFPSWSKAALYRPILAKVIAL*PSIESD
Trigger: GTCGGATTCAATGGACGGTCACAGTGCTATTACTTT...GGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp GGGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTGAAGATCACCTATTGTaGGAAAATCCTGCTCAAATT +
Preference number: 4 (lower is better)
Translates to: GSREAAEPWGFPSWSKAAEDHLL*ENPAQI
Trigger: AATTTGAGCAGGATTTTCTCACAATAGGTGATCTTC...AGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000497424.5
CDS-3UTR TCA 90 bp AGGCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCATCCAGTTTGCAAAGCTaGAGATCACCTATTGTGAGA +
Preference number: 4 (lower is better)
Translates to: RPWPRSPWEVSKFTGVGPSSLQS*RSPIVR
Trigger: TCTCACAATAGGTGATCTTCAGCTTTGCAAACTGGA...TGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000497424.5
CDS-3UTR TCA 90 bp CTGGAGCTCAGAGGTAAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTAAACCAGATTCTCCCTaGTCCCCTGAGGGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: LELRGKGWLKCSLEISQGKPDSP*SPEGVS
Trigger: TGACACCCCCTCAGGGGATCAGGGAGAATCTGGTTT...ACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTTACCTCTGAGCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCCTCAGGCAGTCTTCTaGGACTCACCTCCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: PPCFAHLHAYHSQLCISNPQAVF*DSPPKC
Trigger: GCACTTGGGAGGTGAGTCTCAGAAGACTGCCTGAGG...GTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CCTCCCCAGGTAATGATCACGGGATCTTCAACAGCTCAAGGAGTGCTCCAACAGGGTCTCCATGGGAAGTaGGCAAGTTCACAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: PPQVMITGSSTAQGVLQQGLHGK*ASSQEL
Trigger: CAACTCCTGTGAACTTGCTCACTTCCCATGGAGACC...CTGTTGGAGCACTCCTTGAGCTGTTGAAGATCCCGTGATCATTACCTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643504.2
CDS-3UTR TCA 90 bp GAAGGTTTCAGGAACCCCTCCCCAGGTAATGATCACGGGATCTTCAACAGCTCAGGCAGGAGAATTGCTTaGGCCTGGAAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: EGFRNPSPGNDHGIFNSSGRRIA*AWKAEV
Trigger: AACCTCTGCCTTCCAGGCTCAAGCAATTCTCCTGCC...TGAGCTGTTGAAGATCCCGTGATCATTACCTGGGGAGGGGTTCCTGAAACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643504.2
CDS-3UTR TCA 90 bp AGCCACGATCTTGCAACCAATTGTGGGCAACCTCAATTCAGATGCCTAGAGAGCATGGTCTCGATCTCCTaGCCTCGTGATGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: SHDLATNCGQPQFRCLESMVSIS*PRDAPA
Trigger: GGCAGGTGCATCACGAGGTCAGGAGATCGAGACCAT...GCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR TCA 90 bp AGCACCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCACCAGTGAGGACCAGTGGTaGTGTGTGGCTGCAACTGTT +
Preference number: 4 (lower is better)
Translates to: STFGLPSSPYFCDCKGPTSEDQW*CVAATV
Trigger: AACAGTTGCAGCCACACATCACCACTGGTCCTCACT...GGTGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp AGGCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCAATAATCCAAAGCATATaGCAAAAGCCGCATGGCGAT +
Preference number: 4 (lower is better)
Translates to: RPWPRSPWEVSKFTGVGPIIQSI*QKPHGD
Trigger: ATCGCCATGCGGCTTTTGGCATATGCTTTGGATTAT...TGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGGCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCATACCCAAGGAAATTCTaGCAAGAAAAGAAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: RPWPRSPWEVSKFTGVGPYPRKF*QEKKPC
Trigger: ACAGGGCTTCTTTTCTTGGCAGAATTTCCTTGGGTA...TGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGCCACGATCTTGCAACCAATTGTGGGCAACCTCAATTCAGATGCCTAGAGAGCACGCAGCAGCCATCCTaGTCTGCACCCACACAAGGT +
Preference number: 4 (lower is better)
Translates to: SHDLATNCGQPQFRCLESTQQPS*SAPTQG
Trigger: ACCTTGTGTGGGTGCAGAGCAGGATGGCTGCTGCGT...GCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGCCACGATCTTGCAACCAATTGTGGGCAACCTCAATTCAGATGCCTAGAGAGCGCAGGAGGATGGTGGTaGCATCTTTGGTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SHDLATNCGQPQFRCLESAGGWW*HLWCLG
Trigger: ACCCAGGCACCAAAGATGGCACCACCATCCTCCTGC...GCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCTGGAAGGCAGAGGTTaGAGTGAGCTGAGATCGCCC +
Preference number: 4 (lower is better)
Translates to: PPCFAHLHAYHSQLCISNLEGRG*SELRSP
Trigger: GGGCGATCTCAGCTCACTGCAACCTCTGCCTTCCAG...GTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGTCAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCACAGGCCACACCACCCTaGAAAGAGTTGCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: SQLNTEQLSSEALPMSDAQATPP*KELPPP
Trigger: GGGTGGGGGCAACTCTTTGCAGGGTGGTGTGGCCTG...TGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACTCACCCAGGCTGGAGTaGAGTGCAGCAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: PPCFAHLHAYHSQLCISNSPRLE*SAAISA
Trigger: AGCCGAGATTGCTGCACTGCACTCCAGCCTGGGTGA...GTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000497424.5
CDS-3UTR GCA 90 bp AAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGACTGCTCCTGTGGCATAGTGTaGAAGCGGGGGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: KGWLKCSLEISQGDANDCSCGIV*KRGWGQ
Trigger: CTGACCCCACCCCCGCTTGCACACTATGCCACAGGA...GCAGTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp GGCTGTGAAATGAATGCCAGATTCGGTGGCATGGGATTCACTGGTGGCCTATCATGTGATGGAAGCCCCTaGCCTTCCTGTGGCATAGTG +
Preference number: 4 (lower is better)
Translates to: GCEMNARFGGMGFTGGLSCDGSP*PSCGIV
Trigger: CACTATGCCACAGGAAGGGCAGGGGCTTCCATCACA...TGATAGGCCACCAGTGAATCCCATGCCACCGAATCTGGCATTCATTTCACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp CACAGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGAACGAGGGACCACCGTaGGGGGACAGTGTCCGCGCG +
Preference number: 4 (lower is better)
Translates to: HRLNANQSNAQMIAKTILNEGPP*GDSVRA
Trigger: CGCGCGGACACTGTCCCCGCACGGTGGTCCCTCGTT...CAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621507.1
CDS-3UTR CCA 90 bp TCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCAGGGAGCAGCACCCTGATCCAGTCCAAACCATaGAAAAAGCGGCCGCTTTTT +
Preference number: 4 (lower is better)
Translates to: SPWEVSKFTGVGPGSSTLIQSKP*KKRPLF
Trigger: AAAAAGCGGCCGCTTTTTCCATGGTTTGGACTGGAT...CAGGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp CTGGAGCTCAGAGGTAAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTAGCCACAGCCCAGCCTaGCAGTCCAAACCTCTCATA +
Preference number: 4 (lower is better)
Translates to: LELRGKGWLKCSLEISQGSHSPA*QSKPLI
Trigger: TATGAGAGGTTTGGACTGCCAGGCTGGGCTGTGGCT...ACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTTACCTCTGAGCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp GGTTTCAGGAACCCCTCCCCAGGTAATGATCACGGGATCTTCAACAGCTCAAGGTGGGGTTTTCCCTCCTaGTCCAAGGCTGCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: GFRNPSPGNDHGIFNSSRWGFPS*SKAALY
Trigger: GTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCA...CCTTGAGCTGTTGAAGATCCCGTGATCATTACCTGGGGAGGGGTTCCTGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000643504.2
CDS-3UTR CCA 90 bp CAAGAAAAGAAGCCCTGTCTCTCCAGACATTCATTCCCAGGATTTAGTGTAAAGCTGCCTCCATGCGGCTaGCACCCTGCCCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: QEKKPCLSRHSFPGFSVKLPPCG*HPAHPS
Trigger: GGAGGGATGGGCAGGGTGCCAGCCGCATGGAGGCAG...CTTTACACTAAATCCTGGGAATGAATGTCTGGAGAGACAGGGCTTCTTTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CCTGAGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTATGGTGGTGCCATCTTTaGTGCCTGGGTACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: PEQSFSLQLPPSLLNSRLWWCHL*CLGTGG
Trigger: TCCTCCAGTACCCAGGCACCAAAGATGGCACCACCA...TAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATATCAAGCAGGAGGATGGTaGTGCCATCTTTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LLVQGCFVQAHPCLQQQYQAGGW*CHLWCL
Trigger: CAGGCACCAAAGATGGCACCACCATCCTCCTGCTTG...ATATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATCATGGGATTCACTGGTaGCCTATCAAGAACCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSWSKAALYRPILAFNSNHGIHW*PIKNPA
Trigger: AGCAGGGTTCTTGATAGGCCACCAGTGAATCCCATG...ATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp GTGGCCCTGCTGACTCATGTTAGTCCTCCAGATTGTGCTGCTTCTGCCAGTGTACCAGATTCGGTGGCATaGGATTCACTGGTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: VALLTHVSPPDCAASASVPDSVA*DSLVAY
Trigger: ATAGGCCACCAGTGAATCCCATGCCACCGAATCTGG...TACACTGGCAGAAGCAGCACAATCTGGAGGACTAACATGAGTCAGCAGGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp GTGGCCCTGCTGACTCATGTTAGTCCTCCAGATTGTGCTGCTTCTGCCAGTGTAATGCTAATGACTGCTTaGGGAGACCCAGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: VALLTHVSPPDCAASASVMLMTA*GDPGLR
Trigger: CCTCAGTCCTGGGTCTCCCCAAGCAGTCATTAGCAT...TACACTGGCAGAAGCAGCACAATCTGGAGGACTAACATGAGTCAGCAGGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp GGCTGTGAAATGAATGCCAGATTCGGTGGCATGGGATTCACTGGTGGCCTATCAGAGACGGCAGTAAGCTaGGATGAGGATGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: GCEMNARFGGMGFTGGLSETAVS*DEDVGT
Trigger: AGTGCCCACATCCTCATCCCAGCTTACTGCCGTCTC...TGATAGGCCACCAGTGAATCCCATGCCACCGAATCTGGCATTCATTTCACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp GTCCGCCCACTACCCAAGGAAATTCTGCCAAGAAAAGAAGCCCTGTCTCTCCAGCTCACTAGGACCGAGTaGCTTCCCAGCTTCCATCAA +
Preference number: 4 (lower is better)
Translates to: VRPLPKEILPRKEALSLQLTRTE*LPSFHQ
Trigger: TTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAG...CTGGAGAGACAGGGCTTCTTTTCTTGGCAGAATTTCCTTGGGTAGTGGGCGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp GGCTGTGAAATGAATGCCAGATTCGGTGGCATGGGATTCACTGGTGGCCTATCACAAAGCCTTCCTGTGTaGCCGTTGCTGCTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GCEMNARFGGMGFTGGLSQSLPV*PLLLSS
Trigger: TGAGGAGAGCAGCAACGGCCACACAGGAAGGCTTTG...TGATAGGCCACCAGTGAATCCCATGCCACCGAATCTGGCATTCATTTCACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AGCCACGATCTTGCAACCAATTGTGGGCAACCTCAATTCAGATGCCTAGAGAGCCTATGTTGCCCAGGCTaGCCTCCTCACTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: SHDLATNCGQPQFRCLESLCCPG*PPHSVH
Trigger: GTGCACAGAGTGAGGAGGCCAGCCTGGGCAACATAG...GCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp GTGGCCCTGCTGACTCATGTTAGTCCTCCAGATTGTGCTGCTTCTGCCAGTGTATCCAGCGTCAGTTCATaGAGCTACTCCCTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: VALLTHVSPPDCAASASVSSVSS*SYSLSL
Trigger: GAGGGAAAGGGAGTAGCTCCATGAACTGACGCTGGA...TACACTGGCAGAAGCAGCACAATCTGGAGGACTAACATGAGTCAGCAGGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp CCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCACAGTGAGTCTCATGTaGATATGCCTGAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: PWGFPSWSKAALYRPILATVSLM*ICLNVQ
Trigger: CTGGACATTCAGGCATATCCACATGAGACTCACTGT...GGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316562.9
3UTR CAA 72 bp TCCTCCAGATTGTGCTGCTTCTGCCAGTGTACCCACTaGCATCAGAACAGTCCGCCCACTACCCAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: SSRLCCFCQCTH*HQNSPPTTQGN
Trigger: ATTTCCTTGGGTAGTGGGCGGACTGTTCTGATGCAAGTGGGTACACTGGCAGAAGCAGCACAATCTGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
CDS-3UTR TCA 90 bp GCGACAGGATGCTCAAGATCAGGCTCTGTAGCTGACAGCAGTGGCACAGGCCTCCAGAAGCACTTCCAATaGGTGATGCAGAGATTTCAA +
Preference number: 4 (lower is better)
Translates to: ATGCSRSGSVADSSGTGLQKHFQ*VMQRFQ
Trigger: TTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTG...GAGGCCTGTGCCACTGCTGTCAGCTACAGAGCCTGATCTTGAGCATCCTGTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR TCA 90 bp TCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAGGTACTGGAGGAGGGTaGGGCCACCAACAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: SNPNTQCLFGVSKSRSPQGTGGG*GHQQRC
Trigger: GCAGCGCTGTTGGTGGCCTCACCCTCCTCCAGTACC...TTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CTGGAGCTCAGAGGTAAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGGTCTCCATGGGAAGTaGGCAAGTTCACAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: LELRGKGWLKCSLEISQGGLHGK*ASSQEL
Trigger: CAACTCCTGTGAACTTGCTCACTTCCCATGGAGACC...ACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTTACCTCTGAGCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp TTCCTCCGTCACTGCTCAACTCTCGGTTATTTTTCTCACCCTACCTTAGAACTCCAGTGGACAACCTCCTaGACGCAGCACAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: FLRHCSTLGYFSHPTLELQWTTS*TQHSRG
Trigger: GCCTCTGCTGTGCTGCGTTCAGGAGGTTGTCCACTG...GAGTTCTAAGGTAGGGTGAGAAAAATAACCGAGAGTTGAGCAGTGACGGAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp AACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAGCAAGGGCTGCATGGTaGCCCACGTCGAGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: NTEQLSSEALPMSDAEISARAAW*PTSSSG
Trigger: TCCACTGCTCGACGTGGGTCACCATGCAGCCCTTGC...TGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CCTCCCCAGGTAATGATCACGGGATCTTCAACAGCTCAAGGAGTGCTCCAACAGAGACAGTCCCGGGTTTaGGTCCAGCTCTACTCTTTT +
Preference number: 4 (lower is better)
Translates to: PPQVMITGSSTAQGVLQQRQSRV*VQLYSF
Trigger: AAAAGAGTAGAGCTGGACTCAAACCCGGGACTGTCT...CTGTTGGAGCACTCCTTGAGCTGTTGAAGATCCCGTGATCATTACCTGGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643504.2
CDS-3UTR TCA 90 bp CTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATATAACCCTGCTGTGGAGTaGCAGGGTTTACTGAGCACA +
Preference number: 4 (lower is better)
Translates to: LLVQGCFVQAHPCLQQQYNPAVE*QGLLST
Trigger: TGTGCTCAGTAAACCCTGTCACTCCACAGCAGGGTT...ATATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTACTCCTGACCTCAGGTaGTCCACCCGCCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: THEIPLALPTYMHIILSSTPDLR*STRLGL
Trigger: AAGGCCAAGGCGGGTGGATCACCTGAGGTCAGGAGT...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp GGCTGTGAAATGAATGCCAGATTCGGTGGCATGGGATTCACTGGTGGCCTATCAACGCCAGCACCAGGGTaGCCTGAAATAGCGGATTTT +
Preference number: 4 (lower is better)
Translates to: GCEMNARFGGMGFTGGLSTPAPG*PEIADF
Trigger: AAAATCCGCTATTTCAGGTCACCCTGGTGCTGGCGT...TGATAGGCCACCAGTGAATCCCATGCCACCGAATCTGGCATTCATTTCACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR TCA 90 bp TCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCAGGGAGCAGCACCCTGATGTACTCCACTTTTTaGCCAAGCATCAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: SPWEVSKFTGVGPGSSTLMYSTF*PSISTF
Trigger: AAAGGTGCTGATGCTTGGTCAAAAAGTGGAGTACAT...CAGGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp ACATGTTTTACAGTAAGTTCACACACAGGCTTAATGCAAACCAGAGTAATGCACAGGTGGCGGAAGCCCTaGCGTGGCGCTCCATGGGCG +
Preference number: 4 (lower is better)
Translates to: TCFTVSSHTGLMQTRVMHRWRKP*RGAPWA
Trigger: CGCCCATGGAGCGCCACGGCAGGGCTTCCGCCACCT...GTGCATTACTCTGGTTTGCATTAAGCCTGTGTGTGAACTTACTGTAAAACATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000643504.2
CDS-3UTR GCA 90 bp ACATGTTTTACAGTAAGTTCACACACAGGCTTAATGCAAACCAGAGTAATGCACGTCGATCCCGCCTCGTaGCCTCAGCCGAGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: TCFTVSSHTGLMQTRVMHVDPAS*PQPRPR
Trigger: TCGGGGCCTCGGCTGAGGGCACGAGGCGGGATCGAC...GTGCATTACTCTGGTTTGCATTAAGCCTGTGTGTGAACTTACTGTAAAACATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000643504.2
CDS-3UTR GCA 90 bp GCAGAAAGAAAAGCTTCAGCCCCTACCAAGAGCACCTGCAGCCTGGCACTCTCCCAACAGCTCAAGGAGTaGTCCAACAGCTCCAAAATA +
Preference number: 4 (lower is better)
Translates to: AERKASAPTKSTCSLALSQQLKE*SNSSKI
Trigger: TATTTTGGAGCTGTTGGAGCACTCCTTGAGCTGTTG...GGAGAGTGCCAGGCTGCAGGTGCTCTTGGTAGGGGCTGAAGCTTTTCTTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCACATACCCAAGGAAATTCTaGCAAGAAAAGAAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LQGTKLPSTQQPSCSAPTYPRKF*QEKKPC
Trigger: ACAGGGCTTCTTTTCTTGGCAGAATTTCCTTGGGTA...TGTGGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGCCACGATCTTGCAACCAATTGTGGGCAACCTCAATTCAGATGCCTAGAGAGCCATATCAGTTCCCCTTaGCCCAGCTGGAACACGGGT +
Preference number: 4 (lower is better)
Translates to: SHDLATNCGQPQFRCLESHISSP*PSWNTG
Trigger: ACCCGTGTTCCAGCTGGGGCAAGGGGAACTGATATG...GCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp TGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAATGAGCCCAGGTGCCCTCTGGTGCCATCTTTGGTaGCTGGGTACTGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: CLFGVSKSRSPQMSPGALWCHLW*LGTGGG
Trigger: CCCTCCTCCAGTACCCAGGCACCAAAGATGGCACCA...GAGGGCACCTGGGCTCATTTGTGGACTACGTGATTTTGAGACTCCAAATAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp TTCCTCCGTCACTGCTCAACTCTCGGTTATTTTTCTCACCCTACCTTAGAACTCGGGAACAGCAAGGGCTaGATGGTGACCCACGTCGAG +
Preference number: 4 (lower is better)
Translates to: FLRHCSTLGYFSHPTLELGNSKG*MVTHVE
Trigger: CTCGACGTGGGTCACCATGCAGCCCTTGCTGTTCCC...GAGTTCTAAGGTAGGGTGAGAAAAATAACCGAGAGTTGAGCAGTGACGGAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp ACTCTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCACAGAGATCAACAAATaGAGAGAGAAGGCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: TLQGTKLPSTQQPSCSAPTEINK*REKAVS
Trigger: AGACACTGCCTTCTCTCTGCATTTGTTGATCTCTGT...GGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCACCAGTGACAAATGAGCCCAGGTaGCCTCTTGTATCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PLAYHPVLTSVTVRAPPVTNEPR*PLVSLL
Trigger: GAGGAGAGATACAAGAGGGCACCTGGGCTCATTTGT...CACTGGTGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp CCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTGGACTTTGCCCACCTACATaGATATCATTCTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PVVQAGGWWCHLWCLGTGLCPPT*ISFSAL
Trigger: CAGAGCTGAGAATGATATGCATGTAGGTGGGCAAAG...TCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTGGAAAATCCCCCTTGCTTTaGCCACCTACATGCATATCA +
Preference number: 4 (lower is better)
Translates to: PVVQAGGWWCHLWCLGTGKSPLL*PPTCIS
Trigger: TGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTT...TCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCCAAATACCCAGTGCCTGTGTGGCCGTTGCTaGTCTCCTCACCACCCCTCA +
Preference number: 4 (lower is better)
Translates to: HLHAYHSQLCISNPNTQCLCGRC*SPHHPS
Trigger: TGAGGGGTGGTGAGGAGAGCAGCAACGGCCACACAG...GCACTGGGTATTTGGGTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGACTGCCAAGCCTGGTGGATCTaGATCTCACGCCCACTGCAC +
Preference number: 4 (lower is better)
Translates to: KGWLKCSLEISQGDANDCQAWWI*ISRPLH
Trigger: GTGCAGTGGGCGTGAGATGCAGATCCACCAGGCTTG...GCAGTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp CCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTGGACCTTCAACAGCAATATaGGCACCACTTAAGACCTCA +
Preference number: 4 (lower is better)
Translates to: PVVQAGGWWCHLWCLGTGPSTAI*APLKTS
Trigger: TGAGGTCTTAAGTGGTGCCCATATTGCTGTTGAAGG...TCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTGCAGTGTCTCGGGGCTaGAGCTCAGAGGTAAGGGGT +
Preference number: 4 (lower is better)
Translates to: LNTEQLSSEALPMSDAEIAVSRG*SSEVRG
Trigger: ACCCCTTACCTCTGAGCTCCAGCCCCGAGACACTGC...AATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp TGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAATGAGCCCAGGTGCCCTCTCACAGCCCCCTTCATaGCCACTAGTGGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: CLFGVSKSRSPQMSPGALSQPPS*PLVEGR
Trigger: TCTGCCCTCCACTAGTGGCCATGAAGGGGGCTGTGA...GAGGGCACCTGGGCTCATTTGTGGACTACGTGATTTTGAGACTCCAAATAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATGACTTGTTTGTGCTTTaGGGGAACTCTCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: PSWSKAALYRPILAFNSNDLFVL*GNSLLS
Trigger: GCTGAGAAGAGAGTTCCCCCAAAGCACAAACAAGTC...ATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp TCCAGATTGTGCTGCTTCTGCCAGTGTACCCACTTGCATCAGAACAGTCCGCCCGCCCAGATCCTCCCCTaGATTAAAATTGCAACTGGT +
Preference number: 4 (lower is better)
Translates to: SRLCCFCQCTHLHQNSPPAQILP*IKIATG
Trigger: ACCAGTTGCAATTTTAATCCAGGGGAGGATCTGGGC...GGGCGGACTGTTCTGATGCAAGTGGGTACACTGGCAGAAGCAGCACAATCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR TCA 90 bp CCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTGGACAGAAGCACTTCCAATaGGTGATGCAGAGATTTCAA +
Preference number: 4 (lower is better)
Translates to: PVVQAGGWWCHLWCLGTGQKHFQ*VMQRFQ
Trigger: TTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTG...TCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp AGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACATCAAGAACCCTGCTGTaGGCCGGGCGCAGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RLNANQSNAQMIAKTILTSRTLL*AGRRGS
Trigger: TGAGCCCCTGCGCCCGGCTCACAGCAGGGTTCTTGA...TGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp AAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGACTGCCACGTAGTCCACAAATaGGCCCAGGTGCCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: KGWLKCSLEISQGDANDCHVVHK*AQVPSC
Trigger: ACAAGAGGGCACCTGGGCTCATTTGTGGACTACGTG...GCAGTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCACACTCAGATATAAAAGGTaGATTCTCTCCTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LQGTKLPSTQQPSCSAPTLRYKR*ILSLGK
Trigger: CTTTCCCAAGGAGAGAATGCACCTTTTATATCTGAG...TGTGGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATATGTACAGGCCCATCCTTaGCTTCAACAGCAATATGGG +
Preference number: 4 (lower is better)
Translates to: LLVQGCFVQAHPCLQQQYVQAHP*LQQQYG
Trigger: CCCATATTGCTGTTGAAGGCAAGGATGGGCCTGTAC...ATATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTATTTTCTGGAAGGCAGAGGTTaGAGTGAGCTGAGATCGCCC +
Preference number: 4 (lower is better)
Translates to: SSRFLCSFLRHCSTLGYFLEGRG*SELRSP
Trigger: GGGCGATCTCAGCTCACTGCAACCTCTGCCTTCCAG...AAAATAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTTTCTGTGTGGCCGTTGCTaGTCTCCTCACCACCCCTCA +
Preference number: 4 (lower is better)
Translates to: QATYIQQILTLPGHVPLFLCGRC*SPHHPS
Trigger: TGAGGGGTGGTGAGGAGAGCAGCAACGGCCACACAG...AAAAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTCAGGCTGGAGTGCAGTaGAGCAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: THEIPLALPTYMHIILSSQAGVQ*SNLGSL
Trigger: CAGTGAGCCGAGATTGCTGCACTGCACTCCAGCCTG...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000497424.5
CDS-3UTR GCA 90 bp TACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCAGCCAAGATCCCCACTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: YKAGNLYTANPHTAWTCASQDPH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTGGGGATCTTGGCT...GGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp AGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAGCAGCCTCTGCAGGTaGCTGGACAGCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RLNANQSNAQMIAKTILTSSLCR*LDSCWP
Trigger: GGGCCAGCAGCTGTCCAGGCACCTGCAGAGGCTGCT...TGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp ACATGTTTTACAGTAAGTTCACACACAGGCTTAATGCAAACCAGAGTAATGCACAGGCTTTCGACGCGCTaGCGGGAGACCGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TCFTVSSHTGLMQTRVMHRLSTR*RETEVG
Trigger: CCCCACCTCGGTCTCCCGCCAGCGCGTCGAAAGCCT...GTGCATTACTCTGGTTTGCATTAAGCCTGTGTGTGAACTTACTGTAAAACATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000643504.2
CDS-3UTR CCA 90 bp GTCCGCCCACTACCCAAGGAAATTCTGCCAAGAAAAGAAGCCCTGTCTCTCCAGACCCATAAGCCACATTaGAGGTCAGGTACTTCCGAA +
Preference number: 4 (lower is better)
Translates to: VRPLPKEILPRKEALSLQTHKPH*RSGTSE
Trigger: TTCGGAAGTACCTGACCTCCAATGTGGCTTATGGGT...CTGGAGAGACAGGGCTTCTTTTCTTGGCAGAATTTCCTTGGGTAGTGGGCGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp ACATGTTTTACAGTAAGTTCACACACAGGCTTAATGCAAACCAGAGTAATGCACCTGCCTCCATGCGGCTaGCACCCTGCCCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: TCFTVSSHTGLMQTRVMHLPPCG*HPAHPS
Trigger: GGAGGGATGGGCAGGGTGCCAGCCGCATGGAGGCAG...GTGCATTACTCTGGTTTGCATTAAGCCTGTGTGTGAACTTACTGTAAAACATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTCAAGTTCACAGGAGTTaGCCCAGGGAGCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: LNTEQLSSEALPMSDAEIQVHRS*PREQHP
Trigger: AGGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTG...AATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp GAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAAAAATACAGAGGGGCAGGCCCTaGCCTCGGTCTCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: EQLSSEALPMSDAEISKIQRGRP*PRSPWE
Trigger: TTCCCATGGAGACCGAGGCCAGGGCCTGCCCCTCTG...TATTTTTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp GCGACAGGATGCTCAAGATCAGGCTCTGTAGCTGACAGCAGTGGCACAGGCCTCTTTTCTGTTAAATTGTaGGAACAGCAAGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: ATGCSRSGSVADSSGTGLFSVKL*EQQGLH
Trigger: ATGCAGCCCTTGCTGTTCCCACAATTTAACAGAAAA...GAGGCCTGTGCCACTGCTGTCAGCTACAGAGCCTGATCTTGAGCATCCTGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp CCTGAGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTATGGCATGGGATTCACTaGTGGCCTATCAAGAACCCT +
Preference number: 4 (lower is better)
Translates to: PEQSFSLQLPPSLLNSRLWHGIH*WPIKNP
Trigger: AGGGTTCTTGATAGGCCACCAGTGAATCCCATGCCA...TAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp ACTCTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCGATTTCTTAAGCAGATaGACATGTCCAGATTCATGC +
Preference number: 4 (lower is better)
Translates to: TLQGTKLPSTQQPSCSAPDFLSR*TCPDSC
Trigger: GCATGAATCTGGACATGTCCATCTGCTTAAGAAATC...GGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp ACTCTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCGCACACCAGCACACCTaGCTAATTTTCGTAATTATT +
Preference number: 4 (lower is better)
Translates to: TLQGTKLPSTQQPSCSAPAHQHT*LIFVII
Trigger: AATAATTACGAAAATTAGCCAGGTGTGCTGGTGTGC...GGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp GGCTGTGAAATGAATGCCAGATTCGGTGGCATGGGATTCACTGGTGGCCTATCATATATCCCAGCACTTTaGGAGGCCGAAGTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GCEMNARFGGMGFTGGLSYIPAL*EAEVGR
Trigger: TCTTCCCACTTCGGCCTCCCAAAGTGCTGGGATATA...TGATAGGCCACCAGTGAATCCCATGCCACCGAATCTGGCATTCATTTCACAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643504.2
3UTR CAA 72 bp AGCTTCCATCAAGGCCAGCCACGATCTTGCAACCAATaGTGGGCAACCTCAATTCAGATGCCTAGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SFHQGQPRSCNQ*WATSIQMPREL
Trigger: GAGCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCTGGCCTTGATGGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
CDS-3UTR TCA 90 bp CCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTGGAACACATTCTTGCTATTaGGCCAATGTTGTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: PVVQAGGWWCHLWCLGTGTHSCY*ANVVGD
Trigger: ATCACCAACAACATTGGCTCAATAGCAAGAATGTGT...TCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CTCATCATGTTTCCAAAGCTTGAAGCCACAGCCCAGCCTGGCAGTCCAAACCTCACAAAACCAGTCAACTaGACACAGAGCAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LIMFPKLEATAQPGSPNLTKPVN*TQSSSL
Trigger: AAGAGAGCTGCTCTGTGTTCAGTTGACTGGTTTTGT...GAGGTTTGGACTGCCAGGCTGGGCTGTGGCTTCAAGCTTTGGAAACATGATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
CDS-3UTR TCA 90 bp GGAGGAAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCATCCAGTTTGCAAAGCTaGAGATCACCTATTGTGAGA +
Preference number: 4 (lower is better)
Translates to: GGSSKRGRRGHQQRLPNSSSLQS*RSPIVR
Trigger: TCTCACAATAGGTGATCTTCAGCTTTGCAAACTGGA...TGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000497424.5
CDS-3UTR TCA 90 bp CACAGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGCAGTGGACAACCTCCTaGACGCAGCACAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: HRLNANQSNAQMIAKTILQWTTS*TQHSRG
Trigger: GCCTCTGCTGTGCTGCGTTCAGGAGGTTGTCCACTG...CAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp TACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCCTACTCTTTTCCAGCTaGGTGACCCTGGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: YKAGNLYTANPHTAWTCALLFSS*VTLGSL
Trigger: AAGGCTGCCCAGGGTCACTCAGCTGGAAAAGAGTAG...GGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATATGCACAAGGTGGAACATaGGGGAATGGACTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LLVQGCFVQAHPCLQQQYAQGGT*GNGLVS
Trigger: AGAAACTAGTCCATTCCCTCATGTTCCACCTTGTGC...ATATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CAAGAAAAGAAGCCCTGTCTCTCCAGACATTCATTCCCAGGATTTAGTGTAAAGAGGCAGAGGTTGCAGTaGGCTGAGATCGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: QEKKPCLSRHSFPGFSVKRQRLQ*AEIAPL
Trigger: CAGTGGGGCGATCTCAGCTCACTGCAACCTCTGCCT...CTTTACACTAAATCCTGGGAATGAATGTCTGGAGAGACAGGGCTTCTTTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCCAAATACCCAGTGCGGCAGGAGAATTGCTTaGGCCTGGAAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: HLHAYHSQLCISNPNTQCGRRIA*AWKAEV
Trigger: AACCTCTGCCTTCCAGGCTCAAGCAATTCTCCTGCC...GCACTGGGTATTTGGGTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTCAAGAACCCTGCTGTaGGCCGGGCGCAGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKSRTLL*AGRRGS
Trigger: TGAGCCCCTGCGCCCGGCTCACAGCAGGGTTCTTGA...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp GTCCGCCCACTACCCAAGGAAATTCTGCCAAGAAAAGAAGCCCTGTCTCTCCAGACTGTCAGCAGAGAATaGACCAGAACATTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: VRPLPKEILPRKEALSLQTVSRE*TRTLVA
Trigger: GGCTACTAATGTTCTGGTTCATTCTCTGCTGACAGT...CTGGAGAGACAGGGCTTCTTTTCTTGGCAGAATTTCCTTGGGTAGTGGGCGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCACCAGTGTTGTGCATATGCCTTTaGACAGAGGGAACATCCATG +
Preference number: 4 (lower is better)
Translates to: PLAYHPVLTSVTVRAPPVLCICL*TEGTSM
Trigger: CATGGATGTTCCCTCTGTTCAAAGGCATATGCACAA...CACTGGTGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR TCA 90 bp CACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCCAAATACCCAGTGCGGAACTCCCTTCTGGTaGCAGCTGGTCTTCCTAGAG +
Preference number: 4 (lower is better)
Translates to: HLHAYHSQLCISNPNTQCGTPFW*QLVFLE
Trigger: CTCTAGGAAGACCAGCTGTCACCAGAAGGGAGTTCC...GCACTGGGTATTTGGGTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR TCA 90 bp CTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATATAAGCTCTTGTGTCTTTaGTGCAGGAGTTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLVQGCFVQAHPCLQQQYKLLCL*CRSLSS
Trigger: GCTGCTCAAACTCCTGCATCAAAGACACAAGAGCTT...ATATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR TCA 90 bp AAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGACTGCTTGGCCAGTTCCAAGTaGGGACCAGTGGTGATGTGT +
Preference number: 4 (lower is better)
Translates to: KGWLKCSLEISQGDANDCLASSK*GPVVMC
Trigger: ACACATCACCACTGGTCCTCACTTGGAACTGGCCAA...GCAGTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR TCA 90 bp CAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTTTATCAGGCTCTGTAGCTaGCAGCAGTGGCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: QATYIQQILTLPGHVPLFIRLCS*QQWHRP
Trigger: AGGCCTGTGCCACTGCTGTCAGCTACAGAGCCTGAT...AAAAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp AGTCAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCATCCTTCAGCTCGAGGTaGACGTCCCGAATGCCTGTA +
Preference number: 4 (lower is better)
Translates to: SQLNTEQLSSEALPMSDASFSSR*TSRMPV
Trigger: TACAGGCATTCGGGACGTGCACCTCGAGCTGAAGGA...TGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR GCA 90 bp AGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTTCCTTCAGCTCGAGGTaGACGTCCCGAATGCCTGTA +
Preference number: 4 (lower is better)
Translates to: SRQLIYSKSSHCLDMCHFSFSSR*TSRMPV
Trigger: TACAGGCATTCGGGACGTGCACCTCGAGCTGAAGGA...AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR GCA 90 bp TCCAGATTGTGCTGCTTCTGCCAGTGTACCCACTTGCATCAGAACAGTCCGCCCAAAGTAACGTGGAACTaGCCTTCCAAAAACTGCTTG +
Preference number: 4 (lower is better)
Translates to: SRLCCFCQCTHLHQNSPPKVTWN*PSKNCL
Trigger: CAAGCAGTTTTTGGAAGGGCAGTTCCACGTTACTTT...GGGCGGACTGTTCTGATGCAAGTGGGTACACTGGCAGAAGCAGCACAATCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTGCCAGTGTACCCACTTaGATCAGAACAGTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: THEIPLALPTYMHIILSSASVPT*IRTVRP
Trigger: TGGGCGGACTGTTCTGATGCAAGTGGGTACACTGGC...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTTTCCTACCAAGAGCACCTaGAGCCTGGCACTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: QATYIQQILTLPGHVPLFPTKST*SLALSS
Trigger: TGAGGAGAGTGCCAGGCTGCAGGTGCTCTTGGTAGG...AAAAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTCATATCAGTTCCCCTTaGCCCAGCTGGAACACGGGT +
Preference number: 4 (lower is better)
Translates to: THEIPLALPTYMHIILSSHISSP*PSWNTG
Trigger: ACCCGTGTTCCAGCTGGGGCAAGGGGAACTGATATG...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp GGCTGTGAAATGAATGCCAGATTCGGTGGCATGGGATTCACTGGTGGCCTATCACTGTCTCAAAAACCCTaGTGTGGAGTGACAGGGTTT +
Preference number: 4 (lower is better)
Translates to: GCEMNARFGGMGFTGGLSLSQKP*CGVTGF
Trigger: AAACCCTGTCACTCCACAGCAGGGTTTTTGAGACAG...TGATAGGCCACCAGTGAATCCCATGCCACCGAATCTGGCATTCATTTCACAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAGGCACACAGAGATCAACAAATaGAGAGAGAAGGCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: KLKARQKGTSTASSQLRHTEINK*REKAVS
Trigger: AGACACTGCCTTCTCTCTGCATTTGTTGATCTCTGT...GTGCCTGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACACAAATGAGCCCAGGTaGCCTCTTGTATCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PPCFAHLHAYHSQLCISNTNEPR*PLVSLL
Trigger: GAGGAGAGATACAAGAGGGCACCTGGGCTCATTTGT...GTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp GTGGCCCTGCTGACTCATGTTAGTCCTCCAGATTGTGCTGCTTCTGCCAGTGTAAAATCCCCCTTGCTTTaGCCACCTACATGCATATCA +
Preference number: 4 (lower is better)
Translates to: VALLTHVSPPDCAASASVKSPLL*PPTCIS
Trigger: TGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTT...TACACTGGCAGAAGCAGCACAATCTGGAGGACTAACATGAGTCAGCAGGGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGCACCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCACCCAACCTCAATTCAGATaGCTAGAGAGCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: STFGLPSSPYFCDCKGPTQPQFR*LESSSS
Trigger: AGAAGAGGAGCTCTCTAGGCATCTGAATTGAGGTTG...GGTGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp GTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACACAACCTCAATTCAGATaGCTAGAGAGCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VFPPGPRLLCTGPSLPSTQPQFR*LESSSS
Trigger: AGAAGAGGAGCTCTCTAGGCATCTGAATTGAGGTTG...TGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CCTGAGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTACAGAGAATCCTGGAATaGAGAGTACAGTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: PEQSFSLQLPPSLLNSRLQRILE*RVQWSL
Trigger: CAGACTCCACTGTACTCTGCATTCCAGGATTCTCTG...TAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp AGCCACGATCTTGCAACCAATTGTGGGCAACCTCAATTCAGATGCCTAGAGAGCGAGGGAACATCCATGTaGCACTTACGCAAGCACCTT +
Preference number: 4 (lower is better)
Translates to: SHDLATNCGQPQFRCLESEGTSM*HLRKHL
Trigger: AAGGTGCTTGCGTAAGTGGCACATGGATGTTCCCTC...GCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp CTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAATGGCGGGAGACCGAGGTaGGGCCGCTGTAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LNANQSNAQMIAKTILTNGGRPR*GRCKSP
Trigger: TGGGCTCTTACAGCGGCCCCACCTCGGTCTCCCGCC...ATTTGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000643504.2
CDS-3UTR CCA 90 bp TACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCAGCCACAGCCCAGCCTaGCAGTCCAAACCTCTCATA +
Preference number: 4 (lower is better)
Translates to: YKAGNLYTANPHTAWTCASHSPA*QSKPLI
Trigger: TATGAGAGGTTTGGACTGCCAGGCTGGGCTGTGGCT...GGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CCA 90 bp AGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTAGCCACAGCCCAGCCTaGCAGTCCAAACCTCTCATA +
Preference number: 4 (lower is better)
Translates to: SRQLIYSKSSHCLDMCHFSHSPA*QSKPLI
Trigger: TATGAGAGGTTTGGACTGCCAGGCTGGGCTGTGGCT...AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CCA 90 bp ACATGTTTTACAGTAAGTTCACACACAGGCTTAATGCAAACCAGAGTAATGCACGCAGCGTCTGGCCGCTaGTCGTCGGCAGACGAAAGG +
Preference number: 4 (lower is better)
Translates to: TCFTVSSHTGLMQTRVMHAASGR*SSADER
Trigger: CCTTTCGTCTGCCGACGACCAGCGGCCAGACGCTGC...GTGCATTACTCTGGTTTGCATTAAGCCTGTGTGTGAACTTACTGTAAAACATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp CTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAATCGCCCAATGGACGCGTaGGTGGAAGGGCCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: LNANQSNAQMIAKTILTNRPMDA*VEGPEP
Trigger: AGGCTCGGGCCCTTCCACCCACGCGTCCATTGGGCG...ATTTGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp CAAGAAAAGAAGCCCTGTCTCTCCAGACATTCATTCCCAGGATTTAGTGTAAAGTCCCCTTGCCCCAGCTaGAACACGGGTGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: QEKKPCLSRHSFPGFSVKSPCPS*NTGVSA
Trigger: AGCAGAGACACCCGTGTTCCAGCTGGGGCAAGGGGA...CTTTACACTAAATCCTGGGAATGAATGTCTGGAGAGACAGGGCTTCTTTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp TCTGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTACACCAACAGCGCTGCTaGCAGCAGAGGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SVSPTQIPSAYLESQNHVHQQRC*QQRRAE
Trigger: CTCTGCCCTCCTCTGCTGCCAGCAGCGCTGTTGGTG...TACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGTGGCCTCGGTCTCCATaGGAAGTGAGCAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: QLNTEQLSSEALPMSDAEWPRSP*EVSKFT
Trigger: TGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCA...CTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGGGATCACCTGGGGTCTaGAGTTCGAGACCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: NTKQATYIQQILTLPGHVGSPGV*SSRPAW
Trigger: CCAGGCTGGTCTCGAACTCCAGACCCCAGGTGATCC...CACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACTGGCATGGGATTCACTaGTGGCCTATCAAGAACCCT +
Preference number: 4 (lower is better)
Translates to: PPCFAHLHAYHSQLCISNWHGIH*WPIKNP
Trigger: AGGGTTCTTGATAGGCCACCAGTGAATCCCATGCCA...GTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCTTCCTTTCTCACCTaGACCACGGTCACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: NTKQATYIQQILTLPGHVPSFLT*TTVTAP
Trigger: GGGGGCTGTGACCGTGGTCCAGGTGAGAAAGGAAGG...CACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AGTCAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCACAAAGCCTTCCTGTGTaGCCGTTGCTGCTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SQLNTEQLSSEALPMSDAQSLPV*PLLLSS
Trigger: TGAGGAGAGCAGCAACGGCCACACAGGAAGGCTTTG...TGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCACCAGTGAAGCATCAGCACCTTTaGCTTACCATCCAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: PLAYHPVLTSVTVRAPPVKHQHL*LTIQSL
Trigger: TAAGGACTGGATGGTAAGCCAAAGGTGCTGATGCTT...CACTGGTGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
3UTR CAA 72 bp AACTCCCTTCTGGTGACAGCTGGTCTTCCTAGAGTGTaGCTGGTAACTATCGCCTCTTGGTCTTCTGACATC +
Preference number: 4 (lower is better)
Translates to: NSLLVTAGLPRV*LVTIASWSSDI
Trigger: GATGTCAGAAGACCAAGAGGCGATAGTTACCAGCAACACTCTAGGAAGACCAGCTGTCACCAGAAGGGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
CDS-3UTR TCA 90 bp GAAGGTTTCAGGAACCCCTCCCCAGGTAATGATCACGGGATCTTCAACAGCTCAAAAGTAATAGCACTGTaGCCGTCCATTGAATCCGAC +
Preference number: 4 (lower is better)
Translates to: EGFRNPSPGNDHGIFNSSKVIAL*PSIESD
Trigger: GTCGGATTCAATGGACGGTCACAGTGCTATTACTTT...TGAGCTGTTGAAGATCCCGTGATCATTACCTGGGGAGGGGTTCCTGAAACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
CDS-3UTR TCA 90 bp AACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCACATGTTTCCAAAGCTTaGAGCCACAGCCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: NTEQLSSEALPMSDAEISHVSKA*SHSPAW
Trigger: CCAGGCTGGGCTGTGGCTTCAAGCTTTGGAAACATG...TGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR TCA 90 bp TCCAGATTGTGCTGCTTCTGCCAGTGTACCCACTTGCATCAGAACAGTCCGCCCACACATTCTTGCTATTaGGCCAATGTTGTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: SRLCCFCQCTHLHQNSPPTHSCY*ANVVGD
Trigger: ATCACCAACAACATTGGCTCAATAGCAAGAATGTGT...GGGCGGACTGTTCTGATGCAAGTGGGTACACTGGCAGAAGCAGCACAATCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTTTTCTTTTCCAGCTGAGTaGCCCTGGGCAGCCTTACTC +
Preference number: 4 (lower is better)
Translates to: QATYIQQILTLPGHVPLFSFPAE*PWAALL
Trigger: GAGTAAGGCTGCCCAGGGTCACTCAGCTGGAAAAGA...AAAAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTTTGCAAGAGGGCTCTGCTaGGTGAGAACTGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: QATYIQQILTLPGHVPLFARGLC*VRTEMR
Trigger: CCTCATCTCAGTTCTCACTCAGCAGAGCCCTCTTGC...AAAAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATCTAGTTCATCCAGTTTaGAAAGCTGAAGATCACCTA +
Preference number: 4 (lower is better)
Translates to: PSWSKAALYRPILAFNSNLVHPV*KAEDHL
Trigger: TAGGTGATCTTCAGCTTTGCAAACTGGATGAACTAG...ATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAGCCAGTGTACCCACTTaGATCAGAACAGTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: NTEQLSSEALPMSDAEISASVPT*IRTVRP
Trigger: TGGGCGGACTGTTCTGATGCAAGTGGGTACACTGGC...TGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGGTACAGGCCCATCCTTaGCTTCAACAGCAATATGGG +
Preference number: 4 (lower is better)
Translates to: QLNTEQLSSEALPMSDAEVQAHP*LQQQYG
Trigger: CCCATATTGCTGTTGAAGGCAAGGATGGGCCTGTAC...CTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGGCAGCCATCCTGCTCTaGACCCACACAAGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: NTKQATYIQQILTLPGHVAAILL*THTRSQ
Trigger: TTGGGACCTTGTGTGGGTGCAGAGCAGGATGGCTGC...CACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp GAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAAAAATAGGGAACAGCAAGGGCTaGATGGTGACCCACGTCGAG +
Preference number: 4 (lower is better)
Translates to: EQLSSEALPMSDAEISKIGNSKG*MVTHVE
Trigger: CTCGACGTGGGTCACCATGCAGCCCTTGCTGTTCCC...TATTTTTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp TTCCTCCGTCACTGCTCAACTCTCGGTTATTTTTCTCACCCTACCTTAGAACTCGGTGATGCTAATGACTaGTTGGGGAGACCCAGGACT +
Preference number: 4 (lower is better)
Translates to: FLRHCSTLGYFSHPTLELGDAND*LGRPRT
Trigger: AGTCCTGGGTCTCCCCAAGCAGTCATTAGCATCACC...GAGTTCTAAGGTAGGGTGAGAAAAATAACCGAGAGTTGAGCAGTGACGGAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp GTGGCCCTGCTGACTCATGTTAGTCCTCCAGATTGTGCTGCTTCTGCCAGTGTAACAGAGATCAACAAATaGAGAGAGAAGGCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: VALLTHVSPPDCAASASVTEINK*REKAVS
Trigger: AGACACTGCCTTCTCTCTGCATTTGTTGATCTCTGT...TACACTGGCAGAAGCAGCACAATCTGGAGGACTAACATGAGTCAGCAGGGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CTGGAGCTCAGAGGTAAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTAGCTTCCTCCGTCACTaGTCAACTCTCGGTTATTTT +
Preference number: 4 (lower is better)
Translates to: LELRGKGWLKCSLEISQGSFLRH*STLGYF
Trigger: AAAATAACCGAGAGTTGAGCAGTGACGGAGGAAGCT...ACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTTACCTCTGAGCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp TCTGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTATTCCTGTGTGGCCGTTaGTGCTCTCCTCACCACCCC +
Preference number: 4 (lower is better)
Translates to: SVSPTQIPSAYLESQNHVFLCGR*CSPHHP
Trigger: GGGGTGGTGAGGAGAGCAGCAACGGCCACACAGGAA...TACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp GAAGGTTTCAGGAACCCCTCCCCAGGTAATGATCACGGGATCTTCAACAGCTCAATCCAGTCCAAACCATaGAAAAAGCGGCCGCTTTTT +
Preference number: 4 (lower is better)
Translates to: EGFRNPSPGNDHGIFNSSIQSKP*KKRPLF
Trigger: AAAAAGCGGCCGCTTTTTCCATGGTTTGGACTGGAT...TGAGCTGTTGAAGATCCCGTGATCATTACCTGGGGAGGGGTTCCTGAAACCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336066.8
CDS-3UTR CCA 90 bp AGTCAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAACGCTCCACCTCCAGTaGCACAAAAGACAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: SQLNTEQLSSEALPMSDATLHLQ*HKRQCG
Trigger: TCCACACTGTCTTTTGTGCCACTGGAGGTGGAGCGT...TGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000621507.1
ENST00000646394.1
CDS-3UTR CCA 90 bp AAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGAGAGCACCTGCAGCCTaGCACTCTCCTCAGGCAGTC +
Preference number: 4 (lower is better)
Translates to: KIQSRQLIYSKSSHCLDMRAPAA*HSPQAV
Trigger: GACTGCCTGAGGAGAGTGCCAGGCTGCAGGTGCTCT...CATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp TCCAGATTGTGCTGCTTCTGCCAGTGTACCCACTTGCATCAGAACAGTCCGCCCGGTGCATTCTCTCCTTaGGAAAGGCTTTTGAAATTA +
Preference number: 4 (lower is better)
Translates to: SRLCCFCQCTHLHQNSPPGAFSP*ERLLKL
Trigger: TAATTTCAAAAGCCTTTCCCAAGGAGAGAATGCACC...GGGCGGACTGTTCTGATGCAAGTGGGTACACTGGCAGAAGCAGCACAATCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AGTCAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCATGGGGTTTTCCCTCCTaGTCCAAGGCTGCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: SQLNTEQLSSEALPMSDAWGFPS*SKAALY
Trigger: GTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCA...TGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp GAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAAAAATATTGGTGCCTGGGTACTaGAGGAGGGTGAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: EQLSSEALPMSDAEISKILVPGY*RRVRPP
Trigger: TGGTGGCCTCACCCTCCTCCAGTACCCAGGCACCAA...TATTTTTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp TACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCTGGCCTCGGTCTCCATaGGAAGTGAGCAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: YKAGNLYTANPHTAWTCAWPRSP*EVSKFT
Trigger: TGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCA...GGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGACTGCCATGGGATTCACTGGTaGCCTATCAAGAACCCTGCT +
Preference number: 4 (lower is better)
Translates to: KGWLKCSLEISQGDANDCHGIHW*PIKNPA
Trigger: AGCAGGGTTCTTGATAGGCCACCAGTGAATCCCATG...GCAGTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp TTGAACAGAGGGAACATCCATGTGCCACTTACGCAAGCACCTTCAGCAAGACTTAGAACATTAGTAGCCTaGGTGGCAGGACAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: LNRGNIHVPLTQAPSARLRTLVA*VAGQAR
Trigger: TCTTGCCTGTCCTGCCACCCAGGCTACTAATGTTCT...AAGTCTTGCTGAAGGTGCTTGCGTAAGTGGCACATGGATGTTCCCTCTGTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp TCTGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGCAGTGTCTCGGGGCTaGAGCTCAGAGGTAAGGGGT +
Preference number: 4 (lower is better)
Translates to: SVSPTQIPSAYLESQNHVAVSRG*SSEVRG
Trigger: ACCCCTTACCTCTGAGCTCCAGCCCCGAGACACTGC...TACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp GTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACATCTTGCAACCAATTGTaGGCAACCTCAATTCAGATG +
Preference number: 4 (lower is better)
Translates to: VFPPGPRLLCTGPSLPSTSCNQL*ATSIQM
Trigger: CATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGA...TGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTCTCACTAGGACCGAGTaGCTTCCCAGCTTCCATCAA +
Preference number: 4 (lower is better)
Translates to: THEIPLALPTYMHIILSSLTRTE*LPSFHQ
Trigger: TTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAG...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CAAAGCATATGCCAAAAGCCGCATGGCGATCGTATTAATTCTCAAGAAATTTCCCCTCAGGCAGTCTTCTaGGACTCACCTCCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: QSICQKPHGDRINSQEISPQAVF*DSPPKC
Trigger: GCACTTGGGAGGTGAGTCTCAGAAGACTGCCTGAGG...GGAAATTTCTTGAGAATTAATACGATCGCCATGCGGCTTTTGGCATATGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643504.2
CDS-3UTR TCA 90 bp TCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAATCTTTTCCAGCTGAGTaGCCCTGGGCAGCCTTACTC +
Preference number: 4 (lower is better)
Translates to: SNPNTQCLFGVSKSRSPQSFPAE*PWAALL
Trigger: GAGTAAGGCTGCCCAGGGTCACTCAGCTGGAAAAGA...TTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTGAGGTAAGGGGTGGTTaGAGTGTTCCCTGGAAATCA +
Preference number: 4 (lower is better)
Translates to: LNTEQLSSEALPMSDAEIEVRGG*SVPWKS
Trigger: TGATTTCCAGGGAACACTTCAACCACCCCTTACCTC...AATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp AGTCAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGGTAAGGGGTGGTTaGAGTGTTCCCTGGAAATCA +
Preference number: 4 (lower is better)
Translates to: SQLNTEQLSSEALPMSDAEVRGG*SVPWKS
Trigger: TGATTTCCAGGGAACACTTCAACCACCCCTTACCTC...TGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGCCACGATCTTGCAACCAATTGTGGGCAACCTCAATTCAGATGCCTAGAGAGCGTTTATCCACTTTGGTaGTATCTCCACGAGATGCCA +
Preference number: 4 (lower is better)
Translates to: SHDLATNCGQPQFRCLESVYPLW*YLHEMP
Trigger: TGGCATCTCGTGGAGATAGCACCAAAGTGGATAAAC...GCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp GTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACATGCCCTTCCAAAAACTaGTTGTTAAGTTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: VFPPGPRLLCTGPSLPSTCPSKN*LLSFRY
Trigger: GTACCTGAAACTTAACAAGCAGTTTTTGGAAGGGCA...TGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp TCCAGATTGTGCTGCTTCTGCCAGTGTACCCACTTGCATCAGAACAGTCCGCCCATTGTGAGAAAATCCTaGTCAAATTTGTACGCTCCA +
Preference number: 4 (lower is better)
Translates to: SRLCCFCQCTHLHQNSPPIVRKS*SNLYAP
Trigger: TGGAGCGTACAAATTTGAGCAGGATTTTCTCACAAT...GGGCGGACTGTTCTGATGCAAGTGGGTACACTGGCAGAAGCAGCACAATCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000497424.5
CDS-3UTR GCA 90 bp AATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCTCCTGGTCCAAGGCTaGTTTGTACAGGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: NTKQATYIQQILTLPGHVLLVQG*FVQAHP
Trigger: AGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAG...CACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAATGAACACGGGTGTCTCTaGTGCCTCCATGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LNANQSNAQMIAKTILTNEHGCL*CLHAAG
Trigger: GCCAGCCGCATGGAGGCAGCAGAGACACCCGTGTTC...ATTTGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp TTCCTCCGTCACTGCTCAACTCTCGGTTATTTTTCTCACCCTACCTTAGAACTCCCCATATTTCCTAAGTaGCAAGGCCCATGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: FLRHCSTLGYFSHPTLELPIFPK*QGPCAE
Trigger: CTCTGCACATGGGCCTTGGCACTTAGGAAATATGGG...GAGTTCTAAGGTAGGGTGAGAAAAATAACCGAGAGTTGAGCAGTGACGGAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp TGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTGCAGCCATCCTGCTCTaGACCCACACAAGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: CISNPNTQCLFGVSKSRSAAILL*THTRSQ
Trigger: TTGGGACCTTGTGTGGGTGCAGAGCAGGATGGCTGC...ACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp GAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAAAAATATGGTGCCATCTTTGGTaGCTGGGTACTGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: EQLSSEALPMSDAEISKIWCHLW*LGTGGG
Trigger: CCCTCCTCCAGTACCCAGGCACCAAAGATGGCACCA...TATTTTTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp TTCCTCCGTCACTGCTCAACTCTCGGTTATTTTTCTCACCCTACCTTAGAACTCGGATGTGGGCACTGCTaGACAGAGATCAACAAATGC +
Preference number: 4 (lower is better)
Translates to: FLRHCSTLGYFSHPTLELGCGHC*TEINKC
Trigger: GCATTTGTTGATCTCTGTGCAGCAGTGCCCACATCC...GAGTTCTAAGGTAGGGTGAGAAAAATAACCGAGAGTTGAGCAGTGACGGAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTAGCAGTCGTTTTCTTTaGAGCTTCCTCCGTCACTGC +
Preference number: 4 (lower is better)
Translates to: SRQLIYSKSSHCLDMCHFSSRFL*SFLRHC
Trigger: GCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCT...AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp ATTTTTCTGATTGACTTTCTATCTGCGACAGGATGCTCAAGATCAGGCTCTGTACAGGCTGGAGTGCAGTaGAGCAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IFLIDFLSATGCSRSGSVQAGVQ*SNLGSL
Trigger: CAGTGAGCCGAGATTGCTGCACTGCACTCCAGCCTG...TACAGAGCCTGATCTTGAGCATCCTGTCGCAGATAGAAAGTCAATCAGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp TGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAATGAGCCCAGGTGCCCTCGTGGTGATGTGTGGCTaGAACTGTTGTGGTCACTTA +
Preference number: 4 (lower is better)
Translates to: CLFGVSKSRSPQMSPGALVVMCG*NCCGHL
Trigger: TAAGTGACCACAACAGTTGCAGCCACACATCACCAC...GAGGGCACCTGGGCTCATTTGTGGACTACGTGATTTTGAGACTCCAAATAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp TGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAATGAGCCCAGGTGCCCTCGTACAAATCAGAATCTaGAGTCCCTCCCTTACCCCA +
Preference number: 4 (lower is better)
Translates to: CLFGVSKSRSPQMSPGALVQIRI*SPSLTP
Trigger: TGGGGTAAGGGAGGGACTGCAGATTCTGATTTGTAC...GAGGGCACCTGGGCTCATTTGTGGACTACGTGATTTTGAGACTCCAAATAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp CTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATATCTTTCAACTGCCCCTTaGACCAATAATCCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: LLVQGCFVQAHPCLQQQYLSTAP*TNNPKH
Trigger: ATGCTTTGGATTATTGGTCCAAGGGGCAGTTGAAAG...ATATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AGTCAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCACCACAGATCCCATTGTaGAAGGTTTCAGGAACCCCT +
Preference number: 4 (lower is better)
Translates to: SQLNTEQLSSEALPMSDAPQIPL*KVSGTP
Trigger: AGGGGTTCCTGAAACCTTCCACAATGGGATCTGTGG...TGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CCA 90 bp GTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCACAAAAGACAGTGTaGAGACTCGAGAAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: VFPPGPRLLCTGPSLPSTAQKTV*RLEKFL
Trigger: TAAAAACTTCTCGAGTCTCCACACTGTCTTTTGTGC...TGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000497424.5
CDS-3UTR CCA 90 bp ACATGTTTTACAGTAAGTTCACACACAGGCTTAATGCAAACCAGAGTAATGCACAGAGCACCTGCAGCCTaGCACTCTCCTCAGGCAGTC +
Preference number: 4 (lower is better)
Translates to: TCFTVSSHTGLMQTRVMHRAPAA*HSPQAV
Trigger: GACTGCCTGAGGAGAGTGCCAGGCTGCAGGTGCTCT...GTGCATTACTCTGGTTTGCATTAAGCCTGTGTGTGAACTTACTGTAAAACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AAAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATTCCCCTTGCCCCAGCTaGAACACGGGTGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KNTKQATYIQQILTLPGHSPCPS*NTGVSA
Trigger: AGCAGAGACACCCGTGTTCCAGCTGGGGCAAGGGGA...ATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp ACATGTTTTACAGTAAGTTCACACACAGGCTTAATGCAAACCAGAGTAATGCACGCCCATGTGCAGAGGTaGCCACGCCTAGTGGAACAG +
Preference number: 4 (lower is better)
Translates to: TCFTVSSHTGLMQTRVMHAHVQR*PRLVEQ
Trigger: CTGTTCCACTAGGCGTGGCCACCTCTGCACATGGGC...GTGCATTACTCTGGTTTGCATTAAGCCTGTGTGTGAACTTACTGTAAAACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp TCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAATGGTGGTGCCATCTTTaGTGCCTGGGTACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SNPNTQCLFGVSKSRSPQWWCHL*CLGTGG
Trigger: TCCTCCAGTACCCAGGCACCAAAGATGGCACCACCA...TTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp ATATCTCGTACTAGTTTATCCACTTTGGTGCTATCTCCACGAGATGCCATTTCACAAGTTCACAGGAGTTaGCCCAGGGAGCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: ISRTSLSTLVLSPRDAISQVHRS*PREQHP
Trigger: AGGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTG...TGAAATGGCATCTCGTGGAGATAGCACCAAAGTGGATAAACTAGTACGAGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643504.2
CDS-3UTR CCA 90 bp CAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTTTTGGCCTCGGTCTCCATaGGAAGTGAGCAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: QATYIQQILTLPGHVPLFWPRSP*EVSKFT
Trigger: TGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCA...AAAAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp TTCCTCCGTCACTGCTCAACTCTCGGTTATTTTTCTCACCCTACCTTAGAACTCCATGGGATTCACTGGTaGCCTATCAAGAACCCTGCT +
Preference number: 4 (lower is better)
Translates to: FLRHCSTLGYFSHPTLELHGIHW*PIKNPA
Trigger: AGCAGGGTTCTTGATAGGCCACCAGTGAATCCCATG...GAGTTCTAAGGTAGGGTGAGAAAAATAACCGAGAGTTGAGCAGTGACGGAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTAGAACATTAGTAGCCTaGGTGGCAGGACAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: SRQLIYSKSSHCLDMCHFRTLVA*VAGQAR
Trigger: TCTTGCCTGTCCTGCCACCCAGGCTACTAATGTTCT...AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AGTCAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAAGAACATTAGTAGCCTaGGTGGCAGGACAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: SQLNTEQLSSEALPMSDARTLVA*VAGQAR
Trigger: TCTTGCCTGTCCTGCCACCCAGGCTACTAATGTTCT...TGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTGACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp ACATGTTTTACAGTAAGTTCACACACAGGCTTAATGCAAACCAGAGTAATGCACGCAGTGTCTCGGGGCTaGAGCTCAGAGGTAAGGGGT +
Preference number: 4 (lower is better)
Translates to: TCFTVSSHTGLMQTRVMHAVSRG*SSEVRG
Trigger: ACCCCTTACCTCTGAGCTCCAGCCCCGAGACACTGC...GTGCATTACTCTGGTTTGCATTAAGCCTGTGTGTGAACTTACTGTAAAACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp TCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAGAGACGGCAGTAAGCTaGGATGAGGATGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: SNPNTQCLFGVSKSRSPQETAVS*DEDVGT
Trigger: AGTGCCCACATCCTCATCCCAGCTTACTGCCGTCTC...TTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACATCACAGCCCCCTTCATaGCCACTAGTGGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RLNANQSNAQMIAKTILTSQPPS*PLVEGR
Trigger: TCTGCCCTCCACTAGTGGCCATGAAGGGGGCTGTGA...TGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACGAGAACAGAGAATCCTaGAATGCAGAGTACAGTGGA +
Preference number: 4 (lower is better)
Translates to: PPCFAHLHAYHSQLCISNENRES*NAEYSG
Trigger: TCCACTGTACTCTGCATTCCAGGATTCTCTGTTCTC...GTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp AGCACCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCACCACCTTCAGCAAGACTTaGAAACTCAAGGTGAGTAAT +
Preference number: 4 (lower is better)
Translates to: STFGLPSSPYFCDCKGPTTFSKT*KLKVSN
Trigger: ATTACTCACCTTGAGTTTCCAAGTCTTGCTGAAGGT...GGTGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR TCA 90 bp AGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACACATGTTTCCAAAGCTTaGAGCCACAGCCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RLNANQSNAQMIAKTILTHVSKA*SHSPAW
Trigger: CCAGGCTGGGCTGTGGCTTCAAGCTTTGGAAACATG...TGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR TCA 90 bp GAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAAAAATACATGTTTCCAAAGCTTaGAGCCACAGCCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: EQLSSEALPMSDAEISKIHVSKA*SHSPAW
Trigger: CCAGGCTGGGCTGTGGCTTCAAGCTTTGGAAACATG...TATTTTTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR TCA 90 bp TGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAATGAGCCCAGGTGCCCTCAAAGCAGGCATGTCATaGGTGGGAAAGCGTATAAAG +
Preference number: 4 (lower is better)
Translates to: CLFGVSKSRSPQMSPGALKAGMS*VGKRIK
Trigger: CTTTATACGCTTTCCCACTCATGACATGCCTGCTTT...GAGGGCACCTGGGCTCATTTGTGGACTACGTGATTTTGAGACTCCAAATAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000497424.5
CDS-3UTR TCA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGCCTCAGGCAGTCTTCTaGGACTCACCTCCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKPQAVF*DSPPKC
Trigger: GCACTTGGGAGGTGAGTCTCAGAAGACTGCCTGAGG...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp TCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAGGTCTCCATGGGAAGTaGGCAAGTTCACAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SNPNTQCLFGVSKSRSPQGLHGK*ASSQEL
Trigger: CAACTCCTGTGAACTTGCTCACTTCCCATGGAGACC...TTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp TGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTTCTTTTCCAGCTGAGTaGCCCTGGGCAGCCTTACTC +
Preference number: 4 (lower is better)
Translates to: CISNPNTQCLFGVSKSRSSFPAE*PWAALL
Trigger: GAGTAAGGCTGCCCAGGGTCACTCAGCTGGAAAAGA...ACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CAAAGCATATGCCAAAAGCCGCATGGCGATCGTATTAATTCTCAAGAAATTTCCCTACTCTTTTCCAGCTaGGTGACCCTGGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: QSICQKPHGDRINSQEISLLFSS*VTLGSL
Trigger: AAGGCTGCCCAGGGTCACTCAGCTGGAAAAGAGTAG...GGAAATTTCTTGAGAATTAATACGATCGCCATGCGGCTTTTGGCATATGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643504.2
CDS-3UTR TCA 90 bp AAAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATTGCACTCCACCTGGGTaGCACAGCGAGACTGTCTCA +
Preference number: 4 (lower is better)
Translates to: KNTKQATYIQQILTLPGHCTPPG*HSETVS
Trigger: TGAGACAGTCTCGCTGTGTCACCCAGGTGGAGTGCA...ATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp AAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGACTGCACTGTCAGCAGAGAATaGACCAGAACATTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: KGWLKCSLEISQGDANDCTVSRE*TRTLVA
Trigger: GGCTACTAATGTTCTGGTTCATTCTCTGCTGACAGT...GCAGTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp AAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGCACGTAGTCCACAAATaGGCCCAGGTGCCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: KIQSRQLIYSKSSHCLDMHVVHK*AQVPSC
Trigger: ACAAGAGGGCACCTGGGCTCATTTGTGGACTACGTG...CATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTTTGAGCAGCAGCAACTaGAGGCTTCTATTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: THEIPLALPTYMHIILSSLSSSN*RLLFCG
Trigger: CCCACAAAATAGAAGCCTTCAGTTGCTGCTGCTCAA...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR TCA 90 bp AGCACCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCACCACAACCAGATTTTTCTaGTTGACTTTCTATCTGCGA +
Preference number: 4 (lower is better)
Translates to: STFGLPSSPYFCDCKGPTTTRFF*LTFYLR
Trigger: TCGCAGATAGAAAGTCAATCAGAAAAATCTGGTTGT...GGTGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp TGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTTCCTTCAGCTCGAGGTaGACGTCCCGAATGCCTGTA +
Preference number: 4 (lower is better)
Translates to: CISNPNTQCLFGVSKSRSSFSSR*TSRMPV
Trigger: TACAGGCATTCGGGACGTGCACCTCGAGCTGAAGGA...ACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp ATATCTCGTACTAGTTTATCCACTTTGGTGCTATCTCCACGAGATGCCATTTCATCCTTCAGCTCGAGGTaGACGTCCCGAATGCCTGTA +
Preference number: 4 (lower is better)
Translates to: ISRTSLSTLVLSPRDAISSFSSR*TSRMPV
Trigger: TACAGGCATTCGGGACGTGCACCTCGAGCTGAAGGA...TGAAATGGCATCTCGTGGAGATAGCACCAAAGTGGATAAACTAGTACGAGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
CDS-3UTR GCA 90 bp CTGGAGCTCAGAGGTAAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTCTAGTTCATCCAGTTTaGAAAGCTGAAGATCACCTA +
Preference number: 4 (lower is better)
Translates to: LELRGKGWLKCSLEISQGLVHPV*KAEDHL
Trigger: TAGGTGATCTTCAGCTTTGCAAACTGGATGAACTAG...ACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTTACCTCTGAGCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGGTTTATCCACTTTGGTaGTATCTCCACGAGATGCCA +
Preference number: 4 (lower is better)
Translates to: QLNTEQLSSEALPMSDAEVYPLW*YLHEMP
Trigger: TGGCATCTCGTGGAGATAGCACCAAAGTGGATAAAC...CTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR GCA 90 bp GGAGGAAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAGGTACACAATTAACCTaGCCAATTAATTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: GGSSKRGRRGHQQRLPNSGTQLT*PINFAE
Trigger: TTCTGCAAAATTAATTGGGCAGGTTAATTGTGTACC...TGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTTCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAAGTGCAGATTGCCTTTaGGTCCACACAGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: NTEQLSSEALPMSDAEISSADCL*VHTESG
Trigger: ACCTGACTCTGTGTGGACGCAAAGGCAATCTGCACT...TGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000621507.1
ENST00000646394.1
CDS-3UTR GCA 90 bp AGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTAGATTGTGCTGCTTCTaGCAGTGTACCCACTTGCAT +
Preference number: 4 (lower is better)
Translates to: SRQLIYSKSSHCLDMCHFRLCCF*QCTHLH
Trigger: ATGCAAGTGGGTACACTGGCAGAAGCAGCACAATCT...AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAGTACAGGCCCATCCTTaGCTTCAACAGCAATATGGG +
Preference number: 4 (lower is better)
Translates to: NTEQLSSEALPMSDAEISVQAHP*LQQQYG
Trigger: CCCATATTGCTGTTGAAGGCAAGGATGGGCCTGTAC...TGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGACGCAGCAGCCATCCTaGTCTGCACCCACACAAGGT +
Preference number: 4 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKTQQPS*SAPTQG
Trigger: ACCTTGTGTGGGTGCAGAGCAGGATGGCTGCTGCGT...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTCTGTCTCAAAAACCCTaGTGTGGAGTGACAGGGTTT +
Preference number: 4 (lower is better)
Translates to: SRQLIYSKSSHCLDMCHFLSQKP*CGVTGF
Trigger: AAACCCTGTCACTCCACAGCAGGGTTTTTGAGACAG...AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGACTGCCAACCTCAATTCAGATaGCTAGAGAGCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KGWLKCSLEISQGDANDCQPQFR*LESSSS
Trigger: AGAAGAGGAGCTCTCTAGGCATCTGAATTGAGGTTG...GCAGTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp GTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTCTCTTTTCCTGTGTGGCCGTTaGTGCTCTCCTCACCACCCC +
Preference number: 4 (lower is better)
Translates to: VLSHFVSGSTVMKLSKSLFLCGR*CSPHHP
Trigger: GGGGTGGTGAGGAGAGCAGCAACGGCCACACAGGAA...AAGAGACTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGGGCCTCCTCACTCTGTaGACACACTTTGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: QLNTEQLSSEALPMSDAEGLLTL*THFEKK
Trigger: TTTCTTTTCAAAGTGTGTGCACAGAGTGAGGAGGCC...CTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTACCCATAAGCCACATTaGAGGTCAGGTACTTCCGAA +
Preference number: 4 (lower is better)
Translates to: THEIPLALPTYMHIILSSTHKPH*RSGTSE
Trigger: TTCGGAAGTACCTGACCTCCAATGTGGCTTATGGGT...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTTTCCACAGATCCCATTGTaGAAGGTTTCAGGAACCCCT +
Preference number: 4 (lower is better)
Translates to: QATYIQQILTLPGHVPLFPQIPL*KVSGTP
Trigger: AGGGGTTCCTGAAACCTTCCACAATGGGATCTGTGG...AAAAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CCA 90 bp CTGGAGCTCAGAGGTAAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGCACAAAAGACAGTGTaGAGACTCGAGAAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: LELRGKGWLKCSLEISQGAQKTV*RLEKFL
Trigger: TAAAAACTTCTCGAGTCTCCACACTGTCTTTTGTGC...ACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTTACCTCTGAGCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000497424.5
CDS-3UTR CCA 90 bp CAAGAAAAGAAGCCCTGTCTCTCCAGACATTCATTCCCAGGATTTAGTGTAAAGACGCTCCACCTCCAGTaGCACAAAAGACAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: QEKKPCLSRHSFPGFSVKTLHLQ*HKRQCG
Trigger: TCCACACTGTCTTTTGTGCCACTGGAGGTGGAGCGT...CTTTACACTAAATCCTGGGAATGAATGTCTGGAGAGACAGGGCTTCTTTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000497424.5
CDS-3UTR CCA 90 bp GAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAAAAATACAAGCAGGAGGATGGTaGTGCCATCTTTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: EQLSSEALPMSDAEISKIQAGGW*CHLWCL
Trigger: CAGGCACCAAAGATGGCACCACCATCCTCCTGCTTG...TATTTTTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CACAGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGGTACAAGCAGGAGGATaGTGGTGCCATCTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: HRLNANQSNAQMIAKTILVQAGG*WCHLWC
Trigger: GCACCAAAGATGGCACCACCATCCTCCTGCTTGTAC...CAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGCAAGTTCACAGGAGTTaGCCCAGGGAGCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKQVHRS*PREQHP
Trigger: AGGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTG...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CCTGAGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTATTTTCTGTTAAATTGTaGGAACAGCAAGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PEQSFSLQLPPSLLNSRLFSVKL*EQQGLH
Trigger: ATGCAGCCCTTGCTGTTCCCACAATTTAACAGAAAA...TAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp TCCTCCTCCAAGACTAGTACCTGTGACCCGTTTGTAATTATCTTTGGAATATACCAAAGCCTTCCTGTGTaGCCGTTGCTGCTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SSSKTSTCDPFVIIFGIYQSLPV*PLLLSS
Trigger: TGAGGAGAGCAGCAACGGCCACACAGGAAGGCTTTG...GTATATTCCAAAGATAATTACAAACGGGTCACAGGTACTAGTCTTGGAGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643504.2
CDS-3UTR CCA 90 bp TACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCATCCAGTCCAAACCATaGAAAAACAATGGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: YKAGNLYTANPHTAWTCAIQSKP*KNNGCG
Trigger: CCCGCACCCATTGTTTTTCCATGGTTTGGACTGGAT...GGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621507.1
CDS-3UTR TCA 90 bp TACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCAAAGTAATAGCACTGTaGCCGTCCATTGAATCCGAC +
Preference number: 4 (lower is better)
Translates to: YKAGNLYTANPHTAWTCAKVIAL*PSIESD
Trigger: GTCGGATTCAATGGACGGTCACAGTGCTATTACTTT...GGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR TCA 90 bp TTCCTCCGTCACTGCTCAACTCTCGGTTATTTTTCTCACCCTACCTTAGAACTCAAAGTAATAGCACTGTaGCCGTCCATTGAATCCGAC +
Preference number: 4 (lower is better)
Translates to: FLRHCSTLGYFSHPTLELKVIAL*PSIESD
Trigger: GTCGGATTCAATGGACGGTCACAGTGCTATTACTTT...GAGTTCTAAGGTAGGGTGAGAAAAATAACCGAGAGTTGAGCAGTGACGGAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp AGCCACGATCTTGCAACCAATTGTGGGCAACCTCAATTCAGATGCCTAGAGAGCACACATTCTTGCTATTaGGCCAATGTTGTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: SHDLATNCGQPQFRCLESTHSCY*ANVVGD
Trigger: ATCACCAACAACATTGGCTCAATAGCAAGAATGTGT...GCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp AGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTACAAAACCAGTCAACTaGACACAGAGCAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SRQLIYSKSSHCLDMCHFTKPVN*TQSSSL
Trigger: AAGAGAGCTGCTCTGTGTTCAGTTGACTGGTTTTGT...AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR TCA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTAAAGCAGGCATGTCATaGGTGGGAAAGCGTATAAAG +
Preference number: 4 (lower is better)
Translates to: THEIPLALPTYMHIILSSKAGMS*VGKRIK
Trigger: CTTTATACGCTTTCCCACTCATGACATGCCTGCTTT...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000497424.5
CDS-3UTR TCA 90 bp CTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTACTGTCAGCAGAGAATaGACCAGAACATTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: LNTEQLSSEALPMSDAEITVSRE*TRTLVA
Trigger: GGCTACTAATGTTCTGGTTCATTCTCTGCTGACAGT...AATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp ACATGTTTTACAGTAAGTTCACACACAGGCTTAATGCAAACCAGAGTAATGCACTCCTTCAGCTCGAGGTaGACGTCCCGAATGCCTGTA +
Preference number: 4 (lower is better)
Translates to: TCFTVSSHTGLMQTRVMHSFSSR*TSRMPV
Trigger: TACAGGCATTCGGGACGTGCACCTCGAGCTGAAGGA...GTGCATTACTCTGGTTTGCATTAAGCCTGTGTGTGAACTTACTGTAAAACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR GCA 90 bp CTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTAAGATCACCTATCTTTaGGTCCACACAGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LNTEQLSSEALPMSDAEIKITYL*VHTESG
Trigger: ACCTGACTCTGTGTGGACGCAAAGATAGGTGATCTT...AATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
CDS-3UTR GCA 90 bp CTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTCAACAGCTCAAGGAGTaGTCCAACAGCTCCAAAATA +
Preference number: 4 (lower is better)
Translates to: LNTEQLSSEALPMSDAEIQQLKE*SNSSKI
Trigger: TATTTTGGAGCTGTTGGAGCACTCCTTGAGCTGTTG...AATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR GCA 90 bp TACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCCAACAGCTCAAGGAGTaGTCCAACAGCTCCAAAATA +
Preference number: 4 (lower is better)
Translates to: YKAGNLYTANPHTAWTCAQQLKE*SNSSKI
Trigger: TATTTTGGAGCTGTTGGAGCACTCCTTGAGCTGTTG...GGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR GCA 90 bp GAAGGTTTCAGGAACCCCTCCCCAGGTAATGATCACGGGATCTTCAACAGCTCAAACCCAAATACCCAGTaGTTATTTGGAGTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: EGFRNPSPGNDHGIFNSSNPNTQ*LFGVSK
Trigger: TTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTT...TGAGCTGTTGAAGATCCCGTGATCATTACCTGGGGAGGGGTTCCTGAAACCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643504.2
CDS-3UTR GCA 90 bp AGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTAGCTTCCTCCGTCACTaGTCAACTCTCGGTTATTTT +
Preference number: 4 (lower is better)
Translates to: SRQLIYSKSSHCLDMCHFSFLRH*STLGYF
Trigger: AAAATAACCGAGAGTTGAGCAGTGACGGAGGAAGCT...AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAATGCATCTCACGCCCACTaGACACCGTTCCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: LNANQSNAQMIAKTILTNASHAH*TPFLSI
Trigger: GATGGAGAGGAACGGTGTGCAGTGGGCGTGAGATGC...ATTTGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp CACAGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGATGTGCTGGGGAGTGTaGTTCCATTTGAGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: HRLNANQSNAQMIAKTILMCWGV*FHLSGD
Trigger: ATCCCCACTCAAATGGAAGCACACTCCCCAGCACAT...CAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp GTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAACATGTCCAGATTCATaGCTAAATATCCAGTTGATA +
Preference number: 4 (lower is better)
Translates to: VFPPGPRLLCTGPSLPSTTCPDS*LNIQLI
Trigger: TATCAACTGGATATTTAGGCATGAATCTGGACATGT...TGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp AAAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATCCGGGAGACAGAAGTTaGAGTGAGCCAAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: KNTKQATYIQQILTLPGHPGDRS*SEPRSP
Trigger: TGGGGATCTTGGCTCACTGCAACTTCTGTCTCCCGG...ATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp AAAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATAGCCACAGCCCAGCCTaGCAGTCCAAACCTCTCATA +
Preference number: 4 (lower is better)
Translates to: KNTKQATYIQQILTLPGHSHSPA*QSKPLI
Trigger: TATGAGAGGTTTGGACTGCCAGGCTGGGCTGTGGCT...ATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CCA 90 bp CAAGAAAAGAAGCCCTGTCTCTCCAGACATTCATTCCCAGGATTTAGTGTAAAGCCACAGATCCCATTGTaGAAGGTTTCAGGAACCCCT +
Preference number: 4 (lower is better)
Translates to: QEKKPCLSRHSFPGFSVKPQIPL*KVSGTP
Trigger: AGGGGTTCCTGAAACCTTCCACAATGGGATCTGTGG...CTTTACACTAAATCCTGGGAATGAATGTCTGGAGAGACAGGGCTTCTTTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp TGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTTGGGGTTTTCCCTCCTaGTCCAAGGCTGCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: CISNPNTQCLFGVSKSRSWGFPS*SKAALY
Trigger: GTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCA...ACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp TCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAATGGCATGGGATTCACTaGTGGCCTATCAAGAACCCT +
Preference number: 4 (lower is better)
Translates to: SNPNTQCLFGVSKSRSPQWHGIH*WPIKNP
Trigger: AGGGTTCTTGATAGGCCACCAGTGAATCCCATGCCA...TTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp TCCTCCTCCAAGACTAGTACCTGTGACCCGTTTGTAATTATCTTTGGAATATACCCAGATTCGGTGGCATaGGATTCACTGGTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: SSSKTSTCDPFVIIFGIYPDSVA*DSLVAY
Trigger: ATAGGCCACCAGTGAATCCCATGCCACCGAATCTGG...GTATATTCCAAAGATAATTACAAACGGGTCACAGGTACTAGTCTTGGAGGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643504.2
CDS-3UTR CCA 90 bp AGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAATGCTAATGACTGCTTaGGGAGACCCAGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: RLNANQSNAQMIAKTILTMLMTA*GDPGLR
Trigger: CCTCAGTCCTGGGTCTCCCCAAGCAGTCATTAGCAT...TGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGCTCACTAGGACCGAGTaGCTTCCCAGCTTCCATCAA +
Preference number: 4 (lower is better)
Translates to: KIQSRQLIYSKSSHCLDMLTRTE*LPSFHQ
Trigger: TTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAG...CATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAATCATGTTTCCAAAGCTTaGAGCCACAGCCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LNANQSNAQMIAKTILTNHVSKA*SHSPAW
Trigger: CCAGGCTGGGCTGTGGCTTCAAGCTTTGGAAACATG...ATTTGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR TCA 90 bp CTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTCAGAAGCACTTCCAATaGGTGATGCAGAGATTTCAA +
Preference number: 4 (lower is better)
Translates to: LNTEQLSSEALPMSDAEIQKHFQ*VMQRFQ
Trigger: TTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTG...AATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR TCA 90 bp TGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTAGACAGTCCCGGGTTTaGGTCCAGCTCTACTCTTTT +
Preference number: 4 (lower is better)
Translates to: CISNPNTQCLFGVSKSRSRQSRV*VQLYSF
Trigger: AAAAGAGTAGAGCTGGACTCAAACCCGGGACTGTCT...ACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp CAAGAAAAGAAGCCCTGTCTCTCCAGACATTCATTCCCAGGATTTAGTGTAAAGGCACAAGGTGGAACATaGGGGAATGGACTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: QEKKPCLSRHSFPGFSVKAQGGT*GNGLVS
Trigger: AGAAACTAGTCCATTCCCTCATGTTCCACCTTGTGC...CTTTACACTAAATCCTGGGAATGAATGTCTGGAGAGACAGGGCTTCTTTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp ATATCTCGTACTAGTTTATCCACTTTGGTGCTATCTCCACGAGATGCCATTTCAGAGGTAAGGGGTGGTTaGAGTGTTCCCTGGAAATCA +
Preference number: 4 (lower is better)
Translates to: ISRTSLSTLVLSPRDAISEVRGG*SVPWKS
Trigger: TGATTTCCAGGGAACACTTCAACCACCCCTTACCTC...TGAAATGGCATCTCGTGGAGATAGCACCAAAGTGGATAAACTAGTACGAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643504.2
CDS-3UTR GCA 90 bp CTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAATTCCTTCAGCTCGAGGTaGACGTCCCGAATGCCTGTA +
Preference number: 4 (lower is better)
Translates to: LNANQSNAQMIAKTILTNSFSSR*TSRMPV
Trigger: TACAGGCATTCGGGACGTGCACCTCGAGCTGAAGGA...ATTTGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR GCA 90 bp CTCGTACTAGTTTATCCACTTTGGTGCTATCTCCACGAGATGCCATTTCAAGAGAAGATCACCTATCTTTaGGTCCACACAGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LVLVYPLWCYLHEMPFQEKITYL*VHTESG
Trigger: ACCTGACTCTGTGTGGACGCAAAGATAGGTGATCTT...CTCTTGAAATGGCATCTCGTGGAGATAGCACCAAAGTGGATAAACTAGTACGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
CDS-3UTR GCA 90 bp CACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCCAAATACCCAGTGCATAATCCAAAGCATATaGCAAAAGCCGCATGGCGAT +
Preference number: 4 (lower is better)
Translates to: HLHAYHSQLCISNPNTQCIIQSI*QKPHGD
Trigger: ATCGCCATGCGGCTTTTGGCATATGCTTTGGATTAT...GCACTGGGTATTTGGGTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGTCAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAATAATCCAAAGCATATaGCAAAAGCCGCATGGCGAT +
Preference number: 4 (lower is better)
Translates to: SQLNTEQLSSEALPMSDAIIQSI*QKPHGD
Trigger: ATCGCCATGCGGCTTTTGGCATATGCTTTGGATTAT...TGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR GCA 90 bp TACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCATAATCCAAAGCATATaGCAAAAGCCGCATGGCGAT +
Preference number: 4 (lower is better)
Translates to: YKAGNLYTANPHTAWTCAIIQSI*QKPHGD
Trigger: ATCGCCATGCGGCTTTTGGCATATGCTTTGGATTAT...GGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR GCA 90 bp CAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTTTCAACAGCTCAAGGAGTaGTCCAACAGCTCCAAAATA +
Preference number: 4 (lower is better)
Translates to: QATYIQQILTLPGHVPLFQQLKE*SNSSKI
Trigger: TATTTTGGAGCTGTTGGAGCACTCCTTGAGCTGTTG...AAAAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR GCA 90 bp AACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCACAACAGCTCAAGGAGTaGTCCAACAGCTCCAAAATA +
Preference number: 4 (lower is better)
Translates to: NTEQLSSEALPMSDAEISQQLKE*SNSSKI
Trigger: TATTTTGGAGCTGTTGGAGCACTCCTTGAGCTGTTG...TGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR GCA 90 bp TCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAAGCAAATCCTCACACTaGCTGGACATGTGCCACTTT +
Preference number: 4 (lower is better)
Translates to: SNPNTQCLFGVSKSRSPQSKSSH*LDMCHF
Trigger: AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCT...TTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATATGGTACACAATTAACCTaGCCAATTAATTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LLVQGCFVQAHPCLQQQYGTQLT*PINFAE
Trigger: TTCTGCAAAATTAATTGGGCAGGTTAATTGTGTACC...ATATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp TACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCAAAGTAACGTGGAACTaGCCTTCCAAAAACTGCTTG +
Preference number: 4 (lower is better)
Translates to: YKAGNLYTANPHTAWTCAKVTWN*PSKNCL
Trigger: CAAGCAGTTTTTGGAAGGGCAGTTCCACGTTACTTT...GGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTACCCAAGGAAATTCTaGCAAGAAAAGAAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LNTEQLSSEALPMSDAEIYPRKF*QEKKPC
Trigger: ACAGGGCTTCTTTTCTTGGCAGAATTTCCTTGGGTA...AATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGGGTGATGCTAATGACTaGTTGGGGAGACCCAGGACT +
Preference number: 4 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKGDAND*LGRPRT
Trigger: AGTCCTGGGTCTCCCCAAGCAGTCATTAGCATCACC...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAGGATGTGGGCACTGCTaGACAGAGATCAACAAATGC +
Preference number: 4 (lower is better)
Translates to: RLNANQSNAQMIAKTILTGCGHC*TEINKC
Trigger: GCATTTGTTGATCTCTGTGCAGCAGTGCCCACATCC...TGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp TGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTGGATGTGGGCACTGCTaGACAGAGATCAACAAATGC +
Preference number: 4 (lower is better)
Translates to: CISNPNTQCLFGVSKSRSGCGHC*TEINKC
Trigger: GCATTTGTTGATCTCTGTGCAGCAGTGCCCACATCC...ACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp GTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTCTCTTGGCCAGCCACGATCTTaGAACCAATTGTGGGCAACC +
Preference number: 4 (lower is better)
Translates to: VLSHFVSGSTVMKLSKSLGQPRS*NQLWAT
Trigger: GGTTGCCCACAATTGGTTGCAAGATCGTGGCTGGCC...AAGAGACTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGACCCATAAGCCACATTaGAGGTCAGGTACTTCCGAA +
Preference number: 4 (lower is better)
Translates to: NTKQATYIQQILTLPGHVTHKPH*RSGTSE
Trigger: TTCGGAAGTACCTGACCTCCAATGTGGCTTATGGGT...CACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CCA 90 bp CACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCCAAATACCCAGTGCCTTTCAACTGCCCCTTaGACCAATAATCCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: HLHAYHSQLCISNPNTQCLSTAP*TNNPKH
Trigger: ATGCTTTGGATTATTGGTCCAAGGGGCAGTTGAAAG...GCACTGGGTATTTGGGTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTCTTTCAACTGCCCCTTaGACCAATAATCCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: SRQLIYSKSSHCLDMCHFLSTAP*TNNPKH
Trigger: ATGCTTTGGATTATTGGTCCAAGGGGCAGTTGAAAG...AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CCA 90 bp ATATCTCGTACTAGTTTATCCACTTTGGTGCTATCTCCACGAGATGCCATTTCACCACAGATCCCATTGTaGAAGGTTTCAGGAACCCCT +
Preference number: 4 (lower is better)
Translates to: ISRTSLSTLVLSPRDAISPQIPL*KVSGTP
Trigger: AGGGGTTCCTGAAACCTTCCACAATGGGATCTGTGG...TGAAATGGCATCTCGTGGAGATAGCACCAAAGTGGATAAACTAGTACGAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
CDS-3UTR CCA 90 bp AAAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATACGCTCCACCTCCAGTaGCACAAAAGACAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: KNTKQATYIQQILTLPGHTLHLQ*HKRQCG
Trigger: TCCACACTGTCTTTTGTGCCACTGGAGGTGGAGCGT...ATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000621507.1
ENST00000646394.1
CDS-3UTR CCA 90 bp GTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTCTCTTTGGTGGTGCCATCTTTaGTGCCTGGGTACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: VLSHFVSGSTVMKLSKSLWWCHL*CLGTGG
Trigger: TCCTCCAGTACCCAGGCACCAAAGATGGCACCACCA...AAGAGACTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AAAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTACAAGCAGGAGGATaGTGGTGCCATCTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: KNTKQATYIQQILTLPGHVQAGG*WCHLWC
Trigger: GCACCAAAGATGGCACCACCATCCTCCTGCTTGTAC...ATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp TTCCTCCGTCACTGCTCAACTCTCGGTTATTTTTCTCACCCTACCTTAGAACTCTCTTGCAACCAATTGTaGGCAACCTCAATTCAGATG +
Preference number: 4 (lower is better)
Translates to: FLRHCSTLGYFSHPTLELSCNQL*ATSIQM
Trigger: CATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGA...GAGTTCTAAGGTAGGGTGAGAAAAATAACCGAGAGTTGAGCAGTGACGGAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp TTGAACAGAGGGAACATCCATGTGCCACTTACGCAAGCACCTTCAGCAAGACTTTATCCAGTTGATAACTaGAAAATGCTGGTTCACGGT +
Preference number: 4 (lower is better)
Translates to: LNRGNIHVPLTQAPSARLYPVDN*KMLVHG
Trigger: ACCGTGAACCAGCATTTTCCAGTTATCAACTGGATA...AAGTCTTGCTGAAGGTGCTTGCGTAAGTGGCACATGGATGTTCCCTCTGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
3UTR CAA 72 bp AGATGTACTCCACTTTTTGACCAAGCATCAGCACCTTaGGCTTACCATCCAGTCCTTACTTCTGTGACTGTA +
Preference number: 4 (lower is better)
Translates to: RCTPLFDQASAP*AYHPVLTSVTV
Trigger: TACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGGTGCTGATGCTTGGTCAAAAAGTGGAGTACATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000610179.6
CDS-3UTR TCA 90 bp AATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGAAAGTAATAGCACTGTaGCCGTCCATTGAATCCGAC +
Preference number: 4 (lower is better)
Translates to: NTKQATYIQQILTLPGHVKVIAL*PSIESD
Trigger: GTCGGATTCAATGGACGGTCACAGTGCTATTACTTT...CACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR TCA 90 bp CTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTACACATTCTTGCTATTaGGCCAATGTTGTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LNTEQLSSEALPMSDAEITHSCY*ANVVGD
Trigger: ATCACCAACAACATTGGCTCAATAGCAAGAATGTGT...AATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR TCA 90 bp TGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAATGAGCCCAGGTGCCCTCGAAGATCACCTATTGTaGGAAAATCCTGCTCAAATT +
Preference number: 4 (lower is better)
Translates to: CLFGVSKSRSPQMSPGALEDHLL*ENPAQI
Trigger: AATTTGAGCAGGATTTTCTCACAATAGGTGATCTTC...GAGGGCACCTGGGCTCATTTGTGGACTACGTGATTTTGAGACTCCAAATAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000497424.5
CDS-3UTR TCA 90 bp AGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTATTTTGCCTTGTTTTCCATTTaGCAACAGAAATTACCCCAA +
Preference number: 4 (lower is better)
Translates to: SSRFLCSFLRHCSTLGYFALFSI*QQKLPQ
Trigger: TTGGGGTAATTTCTGTTGTCAAATGGAAAACAAGGC...AAAATAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp AATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGGTTTATCCACTTTGGTaGTATCTCCACGAGATGCCA +
Preference number: 4 (lower is better)
Translates to: NTKQATYIQQILTLPGHVVYPLW*YLHEMP
Trigger: TGGCATCTCGTGGAGATAGCACCAAAGTGGATAAAC...CACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR GCA 90 bp GAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAAAAATAAGCAAATCCTCACACTaGCTGGACATGTGCCACTTT +
Preference number: 4 (lower is better)
Translates to: EQLSSEALPMSDAEISKISKSSH*LDMCHF
Trigger: AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCT...TATTTTTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR GCA 90 bp AGTCAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCATGCCCTTCCAAAAACTaGTTGTTAAGTTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: SQLNTEQLSSEALPMSDACPSKN*LLSFRY
Trigger: GTACCTGAAACTTAACAAGCAGTTTTTGGAAGGGCA...TGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR GCA 90 bp AATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCTTTGCCCACCTACATaGATATCATTCTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: NTKQATYIQQILTLPGHVLCPPT*ISFSAL
Trigger: CAGAGCTGAGAATGATATGCATGTAGGTGGGCAAAG...CACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp TCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAAGCTTCCTCCGTCACTaGTCAACTCTCGGTTATTTT +
Preference number: 4 (lower is better)
Translates to: SNPNTQCLFGVSKSRSPQSFLRH*STLGYF
Trigger: AAAATAACCGAGAGTTGAGCAGTGACGGAGGAAGCT...TTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTTTCTTTCAACTGCCCCTTaGACCAATAATCCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: QATYIQQILTLPGHVPLFLSTAP*TNNPKH
Trigger: ATGCTTTGGATTATTGGTCCAAGGGGCAGTTGAAAG...AAAAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CCA 90 bp CTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTGGTGCATTCTCTCCTTaGGAAAGGCTTTTGAAATTA +
Preference number: 4 (lower is better)
Translates to: LNTEQLSSEALPMSDAEIGAFSP*ERLLKL
Trigger: TAATTTCAAAAGCCTTTCCCAAGGAGAGAATGCACC...AATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CAAGAAAAGAAGCCCTGTCTCTCCAGACATTCATTCCCAGGATTTAGTGTAAAGCCTTCAACAGCAATATaGGCACCACTTAAGACCTCA +
Preference number: 4 (lower is better)
Translates to: QEKKPCLSRHSFPGFSVKPSTAI*APLKTS
Trigger: TGAGGTCTTAAGTGGTGCCCATATTGCTGTTGAAGG...CTTTACACTAAATCCTGGGAATGAATGTCTGGAGAGACAGGGCTTCTTTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGACTGTGACCGTCCATTaGATCCGACTGAGTCAATGT +
Preference number: 4 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKTVTVH*IRLSQC
Trigger: ACATTGACTCAGTCGGATTCAATGGACGGTCACAGT...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR TCA 90 bp AAAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATACTGTGACCGTCCATTaGATCCGACTGAGTCAATGT +
Preference number: 4 (lower is better)
Translates to: KNTKQATYIQQILTLPGHTVTVH*IRLSQC
Trigger: ACATTGACTCAGTCGGATTCAATGGACGGTCACAGT...ATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR TCA 90 bp AGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAAAGTAATAGCACTGTaGCCGTCCATTGAATCCGAC +
Preference number: 4 (lower is better)
Translates to: RLNANQSNAQMIAKTILTKVIAL*PSIESD
Trigger: GTCGGATTCAATGGACGGTCACAGTGCTATTACTTT...TGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR TCA 90 bp AGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAAAGCAGGCATGTCATaGGTGGGAAAGCGTATAAAG +
Preference number: 4 (lower is better)
Translates to: RLNANQSNAQMIAKTILTKAGMS*VGKRIK
Trigger: CTTTATACGCTTTCCCACTCATGACATGCCTGCTTT...TGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000621507.1
CDS-3UTR TCA 90 bp AAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGAAAGCAGGCATGTCATaGGTGGGAAAGCGTATAAAG +
Preference number: 4 (lower is better)
Translates to: KIQSRQLIYSKSSHCLDMKAGMS*VGKRIK
Trigger: CTTTATACGCTTTCCCACTCATGACATGCCTGCTTT...CATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000621507.1
ENST00000646394.1
CDS-3UTR TCA 90 bp AATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGTCCAGTTTGCAAAGCTaGAGATCACCTATTGTGAGA +
Preference number: 4 (lower is better)
Translates to: NTKQATYIQQILTLPGHVSSLQS*RSPIVR
Trigger: TCTCACAATAGGTGATCTTCAGCTTTGCAAACTGGA...CACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000621507.1
ENST00000646394.1
CDS-3UTR TCA 90 bp GTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTCTCTTAGTGGGAAGATCGCTTaGGACCAGGAGGAATTCAAG +
Preference number: 4 (lower is better)
Translates to: VLSHFVSGSTVMKLSKSLSGKIA*DQEEFK
Trigger: CTTGAATTCCTCCTGGTCTCAAGCGATCTTCCCACT...AAGAGACTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643504.2
CDS-3UTR GCA 90 bp AGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAGTTTATCCACTTTGGTaGTATCTCCACGAGATGCCA +
Preference number: 4 (lower is better)
Translates to: RLNANQSNAQMIAKTILTVYPLW*YLHEMP
Trigger: TGGCATCTCGTGGAGATAGCACCAAAGTGGATAAAC...TGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR GCA 90 bp GAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAAAAATAGTTTATCCACTTTGGTaGTATCTCCACGAGATGCCA +
Preference number: 4 (lower is better)
Translates to: EQLSSEALPMSDAEISKIVYPLW*YLHEMP
Trigger: TGGCATCTCGTGGAGATAGCACCAAAGTGGATAAAC...TATTTTTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR GCA 90 bp GTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTCTCTTAGTGCAGATTGCCTTTaGGTCCACACAGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: VLSHFVSGSTVMKLSKSLSADCL*VHTESG
Trigger: ACCTGACTCTGTGTGGACGCAAAGGCAATCTGCACT...AAGAGACTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000621507.1
ENST00000646394.1
CDS-3UTR GCA 90 bp AGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTATTTTATTGTGAGAAAATCCTaGTCAAATTTGTACGCTCCA +
Preference number: 4 (lower is better)
Translates to: SSRFLCSFLRHCSTLGYFIVRKS*SNLYAP
Trigger: TGGAGCGTACAAATTTGAGCAGGATTTTCTCACAAT...AAAATAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000497424.5
CDS-3UTR GCA 90 bp GTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTCTCTTCCCATATTTCCTAAGTaGCAAGGCCCATGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: VLSHFVSGSTVMKLSKSLPIFPK*QGPCAE
Trigger: CTCTGCACATGGGCCTTGGCACTTAGGAAATATGGG...AAGAGACTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAATCCCATATTTCCTAAGTaGCAAGGCCCATGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LNANQSNAQMIAKTILTNPIFPK*QGPCAE
Trigger: CTCTGCACATGGGCCTTGGCACTTAGGAAATATGGG...ATTTGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp TACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCAACCCAAATACCCAGTaGTTATTTGGAGTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: YKAGNLYTANPHTAWTCANPNTQ*LFGVSK
Trigger: TTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTT...GGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGACTTTGAAAAGAAAATaGTTCTGGTCGGGCGCGATG +
Preference number: 4 (lower is better)
Translates to: KIQSRQLIYSKSSHCLDMTLKRK*FWSGAM
Trigger: CATCGCGCCCGACCAGAAGCATTTTCTTTTCAAAGT...CATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp ACATGTTTTACAGTAAGTTCACACACAGGCTTAATGCAAACCAGAGTAATGCACACCCATAAGCCACATTaGAGGTCAGGTACTTCCGAA +
Preference number: 4 (lower is better)
Translates to: TCFTVSSHTGLMQTRVMHTHKPH*RSGTSE
Trigger: TTCGGAAGTACCTGACCTCCAATGTGGCTTATGGGT...GTGCATTACTCTGGTTTGCATTAAGCCTGTGTGTGAACTTACTGTAAAACATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR CCA 90 bp AAAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATACCCATAAGCCACATTaGAGGTCAGGTACTTCCGAA +
Preference number: 4 (lower is better)
Translates to: KNTKQATYIQQILTLPGHTHKPH*RSGTSE
Trigger: TTCGGAAGTACCTGACCTCCAATGTGGCTTATGGGT...ATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CCA 90 bp AATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCTAGTTTATCCACTTTaGTGCTATCTCCACGAGATG +
Preference number: 4 (lower is better)
Translates to: NTKQATYIQQILTLPGHVLVYPL*CYLHEM
Trigger: CATCTCGTGGAGATAGCACCAAAGTGGATAAACTAG...CACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CCA 90 bp CTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAATCCACAGATCCCATTGTaGAAGGTTTCAGGAACCCCT +
Preference number: 4 (lower is better)
Translates to: LNANQSNAQMIAKTILTNPQIPL*KVSGTP
Trigger: AGGGGTTCCTGAAACCTTCCACAATGGGATCTGTGG...ATTTGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR TCA 90 bp AAAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATTCCAGTTTGCAAAGCTaGAGATCACCTATCTTTGCG +
Preference number: 4 (lower is better)
Translates to: KNTKQATYIQQILTLPGHSSLQS*RSPIFA
Trigger: CGCAAAGATAGGTGATCTTCAGCTTTGCAAACTGGA...ATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
CDS-3UTR TCA 90 bp GTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTCTCTTACTGTGACCGTCCATTaGATCCGACTGAGTCAATGT +
Preference number: 4 (lower is better)
Translates to: VLSHFVSGSTVMKLSKSLTVTVH*IRLSQC
Trigger: ACATTGACTCAGTCGGATTCAATGGACGGTCACAGT...AAGAGACTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR TCA 90 bp AAAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATACAAAACCAGTCAACTaGACACAGAGCAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: KNTKQATYIQQILTLPGHTKPVN*TQSSSL
Trigger: AAGAGAGCTGCTCTGTGTTCAGTTGACTGGTTTTGT...ATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR TCA 90 bp AAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTCCAGTTTGCAAAGCTaGAGATCACCTATTGTGAGA +
Preference number: 4 (lower is better)
Translates to: KIQSRQLIYSKSSHCLDMSSLQS*RSPIVR
Trigger: TCTCACAATAGGTGATCTTCAGCTTTGCAAACTGGA...CATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000621507.1
ENST00000646394.1
CDS-3UTR TCA 90 bp GTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTCTCTTGCACAAGGTGGAACATaGGGGAATGGACTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: VLSHFVSGSTVMKLSKSLAQGGT*GNGLVS
Trigger: AGAAACTAGTCCATTCCCTCATGTTCCACCTTGTGC...AAGAGACTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR TCA 90 bp TCTGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTACCAGATTTTTCTGATTaGCTTTCTATCTGCGACAGG +
Preference number: 4 (lower is better)
Translates to: SVSPTQIPSAYLESQNHVPDFSD*LSICDR
Trigger: CCTGTCGCAGATAGAAAGTCAATCAGAAAAATCTGG...TACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR GCA 90 bp TCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAACTAGTTCATCCAGTTTaGAAAGCTGAAGATCACCTA +
Preference number: 4 (lower is better)
Translates to: SNPNTQCLFGVSKSRSPQLVHPV*KAEDHL
Trigger: TAGGTGATCTTCAGCTTTGCAAACTGGATGAACTAG...TTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCTAGTTCATCCAGTTTaGAAAGCTGAAGATCACCTA +
Preference number: 4 (lower is better)
Translates to: NTKQATYIQQILTLPGHVLVHPV*KAEDHL
Trigger: TAGGTGATCTTCAGCTTTGCAAACTGGATGAACTAG...CACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR GCA 90 bp CAAAGCATATGCCAAAAGCCGCATGGCGATCGTATTAATTCTCAAGAAATTTCCATAATCCAAAGCATATaGCAAAAGCCGCATGGCGAT +
Preference number: 4 (lower is better)
Translates to: QSICQKPHGDRINSQEISIIQSI*QKPHGD
Trigger: ATCGCCATGCGGCTTTTGGCATATGCTTTGGATTAT...GGAAATTTCTTGAGAATTAATACGATCGCCATGCGGCTTTTGGCATATGCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
CDS-3UTR GCA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGCAACAGCTCAAGGAGTaGTCCAACAGCTCCAAAATA +
Preference number: 4 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKQQLKE*SNSSKI
Trigger: TATTTTGGAGCTGTTGGAGCACTCCTTGAGCTGTTG...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR GCA 90 bp GTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTCTCTTAGCAAATCCTCACACTaGCTGGACATGTGCCACTTT +
Preference number: 4 (lower is better)
Translates to: VLSHFVSGSTVMKLSKSLSKSSH*LDMCHF
Trigger: AAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCT...AAGAGACTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR GCA 90 bp AACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAATTGTGAGAAAATCCTaGTCAAATTTGTACGCTCCA +
Preference number: 4 (lower is better)
Translates to: NTEQLSSEALPMSDAEISIVRKS*SNLYAP
Trigger: TGGAGCGTACAAATTTGAGCAGGATTTTCTCACAAT...TGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000621507.1
ENST00000646394.1
CDS-3UTR GCA 90 bp AATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCTCAGATATAAAAGGTaGATTCTCTCCTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: NTKQATYIQQILTLPGHVLRYKR*ILSLGK
Trigger: CTTTCCCAAGGAGAGAATGCACCTTTTATATCTGAG...CACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp CAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTTTAACCCAAATACCCAGTaGTTATTTGGAGTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: QATYIQQILTLPGHVPLFNPNTQ*LFGVSK
Trigger: TTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTT...AAAAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp GTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTCTCTTAGTCTCATGTGGATATaGCTGAATGTCCAGCGTCAG +
Preference number: 4 (lower is better)
Translates to: VLSHFVSGSTVMKLSKSLSLMWI*LNVQRQ
Trigger: CTGACGCTGGACATTCAGGCATATCCACATGAGACT...AAGAGACTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp CTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAATACCCATAAGCCACATTaGAGGTCAGGTACTTCCGAA +
Preference number: 4 (lower is better)
Translates to: LNANQSNAQMIAKTILTNTHKPH*RSGTSE
Trigger: TTCGGAAGTACCTGACCTCCAATGTGGCTTATGGGT...ATTTGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR CCA 90 bp ATATCTCGTACTAGTTTATCCACTTTGGTGCTATCTCCACGAGATGCCATTTCACTAGTTTATCCACTTTaGTGCTATCTCCACGAGATG +
Preference number: 4 (lower is better)
Translates to: ISRTSLSTLVLSPRDAISLVYPL*CYLHEM
Trigger: CATCTCGTGGAGATAGCACCAAAGTGGATAAACTAG...TGAAATGGCATCTCGTGGAGATAGCACCAAAGTGGATAAACTAGTACGAGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
CDS-3UTR CCA 90 bp TGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCTTTCAACTGCCCCTTaGACCAATAATCCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: CISNPNTQCLFGVSKSRSLSTAP*TNNPKH
Trigger: ATGCTTTGGATTATTGGTCCAAGGGGCAGTTGAAAG...ACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CACAGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGGGTGCATTCTCTCCTTaGGAAAGGCTTTTGAAATTA +
Preference number: 4 (lower is better)
Translates to: HRLNANQSNAQMIAKTILGAFSP*ERLLKL
Trigger: TAATTTCAAAAGCCTTTCCCAAGGAGAGAATGCACC...CAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CACAGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGGTGCTTCCATTTGAGTaGGGATATCAGAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: HRLNANQSNAQMIAKTILVLPFE*GYQKKK
Trigger: CTTTTTCTTCTGATATCCCCACTCAAATGGAAGCAC...CAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp GAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAAAAATAAAGGCTTCTATTTTGTaGGGCAGACATCTTAGCTAC +
Preference number: 4 (lower is better)
Translates to: EQLSSEALPMSDAEISKIKASIL*GRHLSY
Trigger: GTAGCTAAGATGTCTGCCCCACAAAATAGAAGCCTT...TATTTTTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR TCA 90 bp ACATGTTTTACAGTAAGTTCACACACAGGCTTAATGCAAACCAGAGTAATGCACCAGAAGCACTTCCAATaGGTGATGCAGAGATTTCAA +
Preference number: 4 (lower is better)
Translates to: TCFTVSSHTGLMQTRVMHQKHFQ*VMQRFQ
Trigger: TTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTG...GTGCATTACTCTGGTTTGCATTAAGCCTGTGTGTGAACTTACTGTAAAACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR TCA 90 bp CTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAATACAAAACCAGTCAACTaGACACAGAGCAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LNANQSNAQMIAKTILTNTKPVN*TQSSSL
Trigger: AAGAGAGCTGCTCTGTGTTCAGTTGACTGGTTTTGT...ATTTGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR TCA 90 bp GTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTCTCTTACAAAACCAGTCAACTaGACACAGAGCAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: VLSHFVSGSTVMKLSKSLTKPVN*TQSSSL
Trigger: AAGAGAGCTGCTCTGTGTTCAGTTGACTGGTTTTGT...AAGAGACTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR GCA 90 bp AAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGCTAGTTCATCCAGTTTaGAAAGCTGAAGATCACCTA +
Preference number: 4 (lower is better)
Translates to: KIQSRQLIYSKSSHCLDMLVHPV*KAEDHL
Trigger: TAGGTGATCTTCAGCTTTGCAAACTGGATGAACTAG...CATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR GCA 90 bp TCCTCCTCCAAGACTAGTACCTGTGACCCGTTTGTAATTATCTTTGGAATATACTGCCCTTCCAAAAACTaGTTGTTAAGTTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: SSSKTSTCDPFVIIFGIYCPSKN*LLSFRY
Trigger: GTACCTGAAACTTAACAAGCAGTTTTTGGAAGGGCA...GTATATTCCAAAGATAATTACAAACGGGTCACAGGTACTAGTCTTGGAGGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
CDS-3UTR GCA 90 bp TCTGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTATGCCCTTCCAAAAACTaGTTGTTAAGTTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: SVSPTQIPSAYLESQNHVCPSKN*LLSFRY
Trigger: GTACCTGAAACTTAACAAGCAGTTTTTGGAAGGGCA...TACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR GCA 90 bp AGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACACTCAGATATAAAAGGTaGATTCTCTCCTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: RLNANQSNAQMIAKTILTLRYKR*ILSLGK
Trigger: CTTTCCCAAGGAGAGAATGCACCTTTTATATCTGAG...TGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AAAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATCTAGTTTATCCACTTTaGTGCTATCTCCACGAGATG +
Preference number: 4 (lower is better)
Translates to: KNTKQATYIQQILTLPGHLVYPL*CYLHEM
Trigger: CATCTCGTGGAGATAGCACCAAAGTGGATAAACTAG...ATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CCA 90 bp CTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAATCCTTCAACAGCAATATaGGCACCACTTAAGACCTCA +
Preference number: 4 (lower is better)
Translates to: LNANQSNAQMIAKTILTNPSTAI*APLKTS
Trigger: TGAGGTCTTAAGTGGTGCCCATATTGCTGTTGAAGG...ATTTGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AAAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATTCTTGCAACCAATTGTaGGCAACCTCAATTCAGATG +
Preference number: 4 (lower is better)
Translates to: KNTKQATYIQQILTLPGHSCNQL*ATSIQM
Trigger: CATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGA...ATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp AAAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATAGCTCTGCAAACAGCTaGATACAGATAAGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: KNTKQATYIQQILTLPGHSSANS*IQISSL
Trigger: AAGACTGCTTATCTGTATCCAGCTGTTTGCAGAGCT...ATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CCA 90 bp GAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAAAAATAATCCAGTCCAAACCATaGAAAAACTTAGCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: EQLSSEALPMSDAEISKIIQSKP*KNLAFV
Trigger: GACAAAGGCTAAGTTTTTCCATGGTTTGGACTGGAT...TATTTTTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000497424.5
3UTR CAA 72 bp TGTAAAGTAACGTGGAACTGCCCTTCCAAAAACTGCTaGTTAAGTTTCAGGTACACAATTAACCTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: CKVTWNCPSKNC*LSFRYTINLPN
Trigger: ATTGGGCAGGTTAATTGTGTACCTGAAACTTAACAAGCAGTTTTTGGAAGGGCAGTTCCACGTTACTTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.6
ENST00000643504.2
CDS-3UTR TCA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGACACATTCTTGCTATTaGGCCAATGTTGTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKTHSCY*ANVVGD
Trigger: ATCACCAACAACATTGGCTCAATAGCAAGAATGTGT...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR TCA 90 bp AAAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATACACATTCTTGCTATTaGGCCAATGTTGTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: KNTKQATYIQQILTLPGHTHSCY*ANVVGD
Trigger: ATCACCAACAACATTGGCTCAATAGCAAGAATGTGT...ATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR TCA 90 bp GTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTCTCTTCAGAAGCACTTCCAATaGGTGATGCAGAGATTTCAA +
Preference number: 4 (lower is better)
Translates to: VLSHFVSGSTVMKLSKSLQKHFQ*VMQRFQ
Trigger: TTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTG...AAGAGACTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR TCA 90 bp AGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAGAAGATCACCTATTGTaGGAAAATCCTGCTCAAATT +
Preference number: 4 (lower is better)
Translates to: RLNANQSNAQMIAKTILTEDHLL*ENPAQI
Trigger: AATTTGAGCAGGATTTTCTCACAATAGGTGATCTTC...TGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000621507.1
CDS-3UTR TCA 90 bp AAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGGAAGATCACCTATTGTaGGAAAATCCTGCTCAAATT +
Preference number: 4 (lower is better)
Translates to: KIQSRQLIYSKSSHCLDMEDHLL*ENPAQI
Trigger: AATTTGAGCAGGATTTTCTCACAATAGGTGATCTTC...CATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000621507.1
ENST00000646394.1
CDS-3UTR GCA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGCTAGTTCATCCAGTTTaGAAAGCTGAAGATCACCTA +
Preference number: 4 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKLVHPV*KAEDHL
Trigger: TAGGTGATCTTCAGCTTTGCAAACTGGATGAACTAG...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR GCA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTGCCCTTCCAAAAACTaGTTGTTAAGTTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKCPSKN*LLSFRY
Trigger: GTACCTGAAACTTAACAAGCAGTTTTTGGAAGGGCA...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR GCA 90 bp AAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGATTGTGAGAAAATCCTaGTCAAATTTGTACGCTCCA +
Preference number: 4 (lower is better)
Translates to: KIQSRQLIYSKSSHCLDMIVRKS*SNLYAP
Trigger: TGGAGCGTACAAATTTGAGCAGGATTTTCTCACAAT...CATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000621507.1
ENST00000646394.1
CDS-3UTR GCA 90 bp GTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTCTCTTAAAGTAACGTGGAACTaGCCTTCCAAAAACTGCTTG +
Preference number: 4 (lower is better)
Translates to: VLSHFVSGSTVMKLSKSLKVTWN*PSKNCL
Trigger: CAAGCAGTTTTTGGAAGGGCAGTTCCACGTTACTTT...AAGAGACTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CCA 90 bp CTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAATCTAGTTTATCCACTTTaGTGCTATCTCCACGAGATG +
Preference number: 4 (lower is better)
Translates to: LNANQSNAQMIAKTILTNLVYPL*CYLHEM
Trigger: CATCTCGTGGAGATAGCACCAAAGTGGATAAACTAG...ATTTGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR CCA 90 bp ACATGTTTTACAGTAAGTTCACACACAGGCTTAATGCAAACCAGAGTAATGCACGCACAAAAGACAGTGTaGAGACTCGAGAAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: TCFTVSSHTGLMQTRVMHAQKTV*RLEKFL
Trigger: TAAAAACTTCTCGAGTCTCCACACTGTCTTTTGTGC...GTGCATTACTCTGGTTTGCATTAAGCCTGTGTGTGAACTTACTGTAAAACATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000621507.1
CDS-3UTR GCA 90 bp GAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAAAAATAGGTACACAATTAACCTaGCCAATTAATTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: EQLSSEALPMSDAEISKIGTQLT*PINFAE
Trigger: TTCTGCAAAATTAATTGGGCAGGTTAATTGTGTACC...TATTTTTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR GCA 90 bp TCCTCCTCCAAGACTAGTACCTGTGACCCGTTTGTAATTATCTTTGGAATATACGGTACACAATTAACCTaGCCAATTAATTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SSSKTSTCDPFVIIFGIYGTQLT*PINFAE
Trigger: TTCTGCAAAATTAATTGGGCAGGTTAATTGTGTACC...GTATATTCCAAAGATAATTACAAACGGGTCACAGGTACTAGTCTTGGAGGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
CDS-3UTR CCA 90 bp GTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTCTCTTGCACAAAAGACAGTGTaGAGACTCGAGAAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: VLSHFVSGSTVMKLSKSLAQKTV*RLEKFL
Trigger: TAAAAACTTCTCGAGTCTCCACACTGTCTTTTGTGC...AAGAGACTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000621507.1
ENST00000646394.1
CDS GCA 90 bp CGGCCGCCTGCTCCCCAGCCGACGAGACGGAGGTGGCGGAAGCCCTaGCGTGGCGCTCCATGGGCGCGCCGAGCCGGCCCCCTCCCATCC +
Preference number: 5 (lower is better)
Translates to: RPPAPQPTRRRWRKP*RGAPWARRAGPLPS
Trigger: GGATGGGAGGGGGCCGGCTCGGCGCGCCCATGGAGCGCCACGGCAGGGCTTCCGCCACCTCCGTCTCGTCGGCTGGGGAGCAGGCGGCCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000610179.7
ENST00000643504.2
CDS CCA 90 bp GCCTGCTCCCCAGCCGACGAGACGGAGGTGGCGGAAGCCCTGCCGTaGCGCTCCATGGGCGCGCCGAGCCGGCCCCCTCCCATCCGCAGC +
Preference number: 5 (lower is better)
Translates to: ACSPADETEVAEALP*RSMGAPSRPPPIRS
Trigger: GCTGCGGATGGGAGGGGGCCGGCTCGGCGCGCCCATGGAGCGCCACGGCAGGGCTTCCGCCACCTCCGTCTCGTCGGCTGGGGAGCAGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000610179.7
ENST00000643504.2
CDS CCA 90 bp CAGCCGACGAGACGGAGGTGGCGGAAGCCCTGCCGTGGCGCTCCATaGGCGCGCCGAGCCGGCCCCCTCCCATCCGCAGCAGCAGTCGCT +
Preference number: 5 (lower is better)
Translates to: QPTRRRWRKPCRGAP*ARRAGPLPSAAAVA
Trigger: AGCGACTGCTGCTGCGGATGGGAGGGGGCCGGCTCGGCGCGCCCATGGAGCGCCACGGCAGGGCTTCCGCCACCTCCGTCTCGTCGGCTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000610179.7
ENST00000643504.2
CDS GCA 90 bp TCCAGCCAGAGCAGAGGCGCGCCCTCGGCCGGCCGCCTCTTCCGTTaGGCCAACGCGCAGGAAGCCAATCCGACGAGGCTGGGGACGGCC +
Preference number: 5 (lower is better)
Translates to: SSQSRGAPSAGRLFR*ANAQEANPTRLGTA
Trigger: GGCCGTCCCCAGCCTCGTCGGATTGGCTTCCTGCGCGTTGGCGCAACGGAAGAGGCGGCCGGCCGAGGGCGCGCCTCTGCTCTGGCTGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS CCA 90 bp GCCGCTTTTTCCTCAGGCTTTCGACGCGCTGGCGGGAGACCGAGGTaGGGCCGCTGTAAGAGCCCAGTCGATCCCGCCTCGTGCCCTCAG +
Preference number: 5 (lower is better)
Translates to: AAFSSGFRRAGGRPR*GRCKSPVDPASCPQ
Trigger: CTGAGGGCACGAGGCGGGATCGACTGGGCTCTTACAGCGGCCCCACCTCGGTCTCCCGCCAGCGCGTCGAAAGCCTGAGGAAAAAGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000610179.7
ENST00000643504.2
CDS CCA 90 bp AGAAGGCGGTGTAGCCCAGAAGAGAGTGATGGCGGCGCCGCCCAATaGACGCGTGGGTGGAAGGGCCCGAGCCTCCTCATCCACCCCCTC +
Preference number: 5 (lower is better)
Translates to: RRRCSPEESDGGAAQ*TRGWKGPSLLIHPL
Trigger: GAGGGGGTGGATGAGGAGGCTCGGGCCCTTCCACCCACGCGTCCATTGGGCGGCGCCGCCATCACTCTCTTCTGGGCTACACCGCCTTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS CCA 90 bp GCCTCTTCCGTTGCGCCAACGCGCAGGAAGCCAATCCGACGAGGCTaGGGACGGCCCAAAGGCCTCGCGTCCAGTCGGCTCCCTAACTCG +
Preference number: 5 (lower is better)
Translates to: ASSVAPTRRKPIRRG*GRPKGLASSRLPNS
Trigger: CGAGTTAGGGAGCCGACTGGACGCGAGGCCTTTGGGCCGTCCCCAGCCTCGTCGGATTGGCTTCCTGCGCGTTGGCGCAACGGAAGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS TCA 90 bp AGTCGGCTCCCTAACTCGAGGAGGATTGACCGTGCCTCCGTCCAATaGGAGGCTATCGTGACGGGGCGGGGAGAGGGTGGTGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: SRLPNSRRIDRASVQ*EAIVTGRGEGGGGG
Trigger: CCCTCCTCCACCACCCTCTCCCCGCCCCGTCACGATAGCCTCTCATTGGACGGAGGCACGGTCAATCCTCCTCGAGTTAGGGAGCCGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp CTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCACAGGAGGCTGCAGAGCCTaGGGGTTTTCCCTCCTGGTC +
Preference number: 5 (lower is better)
Translates to: LQGTKLPSTQQPSCSAPTGGCRA*GFSLLV
Trigger: GACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCC...TGTGGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACAGGCCAGCCACGATCTaGCAACCAATTGTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: HHPSLGPSGFPASIKASHRPATI*QPIVGN
Trigger: GTTGCCCACAATTGGTTGCAAGATCGTGGCTGGCCT...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTGGACTTCCTGTGTGGCCGTaGCTGCTCTCCTCACCACCC +
Preference number: 5 (lower is better)
Translates to: PVVQAGGWWCHLWCLGTGLPVWP*LLSSPP
Trigger: GGGTGGTGAGGAGAGCAGCAACGGCCACACAGGAAG...TCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp GCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCTGCCAGTGTACCCACTaGCATCAGAACAGTCCGCCC +
Preference number: 5 (lower is better)
Translates to: AEPWGFPSWSKAALYRPICQCTH*HQNSPP
Trigger: GGGCGGACTGTTCTGATGCAAGTGGGTACACTGGCA...GATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp GGGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTGTACAGGCCCATCCTaGCCTTCAACAGCAATATGG +
Preference number: 5 (lower is better)
Translates to: GSREAAEPWGFPSWSKAACTGPS*PSTAIW
Trigger: CCATATTGCTGTTGAAGGCAAGGATGGGCCTGTACA...AGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp GGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTCAGACAGTCCCGGGTTaGAGTCCAGCTCTACTCTTT +
Preference number: 5 (lower is better)
Translates to: GAGRLQSLGVFPPGPRLLQTVPG*SPALLF
Trigger: AAAGAGTAGAGCTGGACTCAAACCCGGGACTGTCTG...AAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CTGCATCTCACGCCCACTGCACACCGTTCCTCTCCATCTGCCCTTCCCTCCCAGGTGTGGCTGCAACTGTaGTGGTCACTTAGGCAAGCT +
Preference number: 5 (lower is better)
Translates to: LHLTPTAHRSSPSALPSQVWLQL*WSLRQA
Trigger: AGCTTGCCTAAGTGACCACAACAGTTGCAGCCACAC...CTGGGAGGGAAGGGCAGATGGAGAGGAACGGTGTGCAGTGGGCGTGAGATGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp TCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCAGGGAGCAGCACCCTGGATGCTAATGACTGCTaGGGGAGACCCAGGACTGAG +
Preference number: 5 (lower is better)
Translates to: SPWEVSKFTGVGPGSSTLDANDC*GRPRTE
Trigger: CTCAGTCCTGGGTCTCCCCAAGCAGTCATTAGCATC...CAGGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CTGCATCTCACGCCCACTGCACACCGTTCCTCTCCATCTGCCCTTCCCTCCCAGTTTTCGTCTTGTAGTTaGGCCCTCGGGTTTCCTCAC +
Preference number: 5 (lower is better)
Translates to: LHLTPTAHRSSPSALPSQFSSCS*ALGFPH
Trigger: GTGAGGAAACCCGAGGGCCAAACTACAAGACGAAAA...CTGGGAGGGAAGGGCAGATGGAGAGGAACGGTGTGCAGTGGGCGTGAGATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp AGGCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCAGAAATCCCCCTTGCTTaGCCCACCTACATGCATATC +
Preference number: 5 (lower is better)
Translates to: RPWPRSPWEVSKFTGVGPEIPLA*PTYMHI
Trigger: GATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTC...TGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCACACTCATGAAATCCCCCTaGCTTTGCCCACCTACATGC +
Preference number: 5 (lower is better)
Translates to: LQGTKLPSTQQPSCSAPTLMKSP*LCPPTC
Trigger: GCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAG...TGTGGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CACCACCCCTCACTAGGACCGAGTGGCTTCCCAGCTTCCATCAAGGCCAGCCACCGATCTTGCAACCAATaGTGGGCAACCTCAATTCAG +
Preference number: 5 (lower is better)
Translates to: HHPSLGPSGFPASIKASHRSCNQ*WATSIQ
Trigger: CTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCG...GTGGCTGGCCTTGATGGAAGCTGGGAAGCCACTCGGTCCTAGTGAGGGGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp ACTCTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCCCAGTGTCAGCAGACTaGTTTGTGCTTTGGGGGAAC +
Preference number: 5 (lower is better)
Translates to: TLQGTKLPSTQQPSCSAPPVSAD*FVLWGN
Trigger: GTTCCCCCAAAGCACAAACAAGTCTGCTGACACTGG...GGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp GTCCGCCCACTACCCAAGGAAATTCTGCCAAGAAAAGAAGCCCTGTCTCTCCAGACATATCAGTTCCCCTaGCCCCAGCTGGAACACGGG +
Preference number: 5 (lower is better)
Translates to: VRPLPKEILPRKEALSLQTYQFP*PQLEHG
Trigger: CCCGTGTTCCAGCTGGGGCAAGGGGAACTGATATGT...CTGGAGAGACAGGGCTTCTTTTCTTGGCAGAATTTCCTTGGGTAGTGGGCGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp GGAGCAGGGAGGCTGCAGAGCCTTGGGGTTTTCCCTCCTGGTCCAAGGCTGCTTTCCTTTTCTGTTAAATaGTGGGAACAGCAAGGGCTG +
Preference number: 5 (lower is better)
Translates to: GAGRLQSLGVFPPGPRLLSFSVK*WEQQGL
Trigger: CAGCCCTTGCTGTTCCCACAATTTAACAGAAAAGGA...AAGCAGCCTTGGACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCCCTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCACAAGAGGTAAGGGGTGGTaGAAGTGTTCCCTGGAAATC +
Preference number: 5 (lower is better)
Translates to: LQGTKLPSTQQPSCSAPTRGKGW*KCSLEI
Trigger: GATTTCCAGGGAACACTTCAACCACCCCTTACCTCT...TGTGGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATATAGTAGGGGCACAGACTaGTGCCTCGCTTCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: LLVQGCFVQAHPCLQQQYSRGTD*CLASQQ
Trigger: CTGCTGGGAAGCGAGGCACAAGTCTGTGCCCCTACT...ATATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp AAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAGGCACCTATATCCCAGCACTTaGGGAGGCCGAAGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: KLKARQKGTSTASSQLRHLYPST*GGRSGK
Trigger: CTTCCCACTTCGGCCTCCCAAAGTGCTGGGATATAG...GTGCCTGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643504.2
CDS-3UTR CAA 90 bp CCTGTGGTACAAGCAGGAGGATGGTGGTGCCATCTTTGGTGCCTGGGTACTGGACACTGTGACCGTCCATaGAATCCGACTGAGTCAATG +
Preference number: 5 (lower is better)
Translates to: PVVQAGGWWCHLWCLGTGHCDRP*NPTESM
Trigger: CATTGACTCAGTCGGATTCAATGGACGGTCACAGTG...TCCAGTACCCAGGCACCAAAGATGGCACCACCATCCTCCTGCTTGTACCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp AGTAGGGGCACAGACTTGTGCCTCGCTTCCCAGCAGCTGCCCAGTGCCTCTGTCACTAGTTTATCCACTTaGGTGCTATCTCCACGAGAT +
Preference number: 5 (lower is better)
Translates to: SRGTDLCLASQQLPSASVTSLST*VLSPRD
Trigger: ATCTCGTGGAGATAGCACCAAAGTGGATAAACTAGT...GACAGAGGCACTGGGCAGCTGCTGGGAAGCGAGGCACAAGTCTGTGCCCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp AAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGACTGCGCAAGTTCACAGGAGTaGGCCCAGGGAGCAGCACCC +
Preference number: 5 (lower is better)
Translates to: KGWLKCSLEISQGDANDCASSQE*AQGAAP
Trigger: GGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTGC...GCAGTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp GTTTTCCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCTAAGGCAGGAGAATaGCTTGAGCCTGGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: VFPPGPRLLCTGPSLPSTAKAGE*LEPGRQ
Trigger: CTGCCTTCCAGGCTCAAGCAATTCTCCTGCCTTAGC...TGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp AAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGACTGCACCTCCCTGGTGTACTaGCCCCCTACAGCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: KGWLKCSLEISQGDANDCTSLVY*PPTAAA
Trigger: GGCTGCTGCTGTAGGGGGCAAGTACACCAGGGAGGT...GCAGTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp TCCAGATTGTGCTGCTTCTGCCAGTGTACCCACTTGCATCAGAACAGTCCGCCCAGTCCACAGATCCCATaGTGGAAGGTTTCAGGAACC +
Preference number: 5 (lower is better)
Translates to: SRLCCFCQCTHLHQNSPPSPQIP*WKVSGT
Trigger: GGTTCCTGAAACCTTCCACAATGGGATCTGTGGACT...GGGCGGACTGTTCTGATGCAAGTGGGTACACTGGCAGAAGCAGCACAATCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp AGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACACGGCCGCCTCTTCCGTaGCGCCAACGCGCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: RLNANQSNAQMIAKTILTRPPLP*RQRAGS
Trigger: GCTTCCTGCGCGTTGGCGCAACGGAAGAGGCGGCCG...TGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp AGGCCCTGGCCTCGGTCTCCATGGGAAGTGAGCAAGTTCACAGGAGTTGGCCCAAGGTGCATTCTCTCCTaGGGAAAGGCTTTTGAAATT +
Preference number: 5 (lower is better)
Translates to: RPWPRSPWEVSKFTGVGPRCILS*GKAFEI
Trigger: AATTTCAAAAGCCTTTCCCAAGGAGAGAATGCACCT...TGGGCCAACTCCTGTGAACTTGCTCACTTCCCATGGAGACCGAGGCCAGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTGGAGGCTGCAGAGCCTaGGGGTTTTCCCTCCTGGTC +
Preference number: 5 (lower is better)
Translates to: LNTEQLSSEALPMSDAEIGGCRA*GFSLLV
Trigger: GACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCC...AATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp GGCTGTGAAATGAATGCCAGATTCGGTGGCATGGGATTCACTGGTGGCCTATCAAGGCAGGAGAATTGCTaGAGCCTGGAAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: GCEMNARFGGMGFTGGLSRQENC*SLEGRG
Trigger: ACCTCTGCCTTCCAGGCTCAAGCAATTCTCCTGCCT...TGATAGGCCACCAGTGAATCCCATGCCACCGAATCTGGCATTCATTTCACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp GAAGGTTTCAGGAACCCCTCCCCAGGTAATGATCACGGGATCTTCAACAGCTCAGCTAAGGCAGGAGAATaGCTTGAGCCTGGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: EGFRNPSPGNDHGIFNSSAKAGE*LEPGRQ
Trigger: CTGCCTTCCAGGCTCAAGCAATTCTCCTGCCTTAGC...TGAGCTGTTGAAGATCCCGTGATCATTACCTGGGGAGGGGTTCCTGAAACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643504.2
CDS-3UTR CAA 90 bp AAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAGGCACAGAGGTAAGGGGTGGTaGAAGTGTTCCCTGGAAATC +
Preference number: 5 (lower is better)
Translates to: KLKARQKGTSTASSQLRHRGKGW*KCSLEI
Trigger: GATTTCCAGGGAACACTTCAACCACCCCTTACCTCT...GTGCCTGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp TCCAGATTGTGCTGCTTCTGCCAGTGTACCCACTTGCATCAGAACAGTCCGCCCGAAATCCCCCTTGCTTaGCCCACCTACATGCATATC +
Preference number: 5 (lower is better)
Translates to: SRLCCFCQCTHLHQNSPPEIPLA*PTYMHI
Trigger: GATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTC...GGGCGGACTGTTCTGATGCAAGTGGGTACACTGGCAGAAGCAGCACAATCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp AGCACCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCACCCTCATGAAATCCCCCTaGCTTTGCCCACCTACATGC +
Preference number: 5 (lower is better)
Translates to: STFGLPSSPYFCDCKGPTLMKSP*LCPPTC
Trigger: GCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAG...GGTGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp GTGGCCCTGCTGACTCATGTTAGTCCTCCAGATTGTGCTGCTTCTGCCAGTGTACTCATGAAATCCCCCTaGCTTTGCCCACCTACATGC +
Preference number: 5 (lower is better)
Translates to: VALLTHVSPPDCAASASVLMKSP*LCPPTC
Trigger: GCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAG...TACACTGGCAGAAGCAGCACAATCTGGAGGACTAACATGAGTCAGCAGGGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTCTTCCTGTGTGGCCGTaGCTGCTCTCCTCACCACCC +
Preference number: 5 (lower is better)
Translates to: THEIPLALPTYMHIILSSLPVWP*LLSSPP
Trigger: GGGTGGTGAGGAGAGCAGCAACGGCCACACAGGAAG...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCACCAGTGGGTCTTCTGACATCATaGCCAGGAACGGGGCACTTT +
Preference number: 5 (lower is better)
Translates to: PLAYHPVLTSVTVRAPPVGLLTS*PGTGHF
Trigger: AAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGACC...CACTGGTGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp CTCATCATGTTTCCAAAGCTTGAAGCCACAGCCCAGCCTGGCAGTCCAAACCTCGAAGATCACCTATCTTaGCGTCCACACAGAGTCAGG +
Preference number: 5 (lower is better)
Translates to: LIMFPKLEATAQPGSPNLEDHLS*RPHRVR
Trigger: CCTGACTCTGTGTGGACGCAAAGATAGGTGATCTTC...GAGGTTTGGACTGCCAGGCTGGGCTGTGGCTTCAAGCTTTGGAAACATGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
CDS-3UTR CAA 90 bp CCTCCCCAGGTAATGATCACGGGATCTTCAACAGCTCAAGGAGTGCTCCAACAGGAAGATCACCTATCTTaGCGTCCACACAGAGTCAGG +
Preference number: 5 (lower is better)
Translates to: PPQVMITGSSTAQGVLQQEDHLS*RPHRVR
Trigger: CCTGACTCTGTGTGGACGCAAAGATAGGTGATCTTC...CTGTTGGAGCACTCCTTGAGCTGTTGAAGATCCCGTGATCATTACCTGGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
CDS-3UTR CAA 90 bp CTCATCATGTTTCCAAAGCTTGAAGCCACAGCCCAGCCTGGCAGTCCAAACCTCAGTCCACAGATCCCATaGTGGAAGGTTTCAGGAACC +
Preference number: 5 (lower is better)
Translates to: LIMFPKLEATAQPGSPNLSPQIP*WKVSGT
Trigger: GGTTCCTGAAACCTTCCACAATGGGATCTGTGGACT...GAGGTTTGGACTGCCAGGCTGGGCTGTGGCTTCAAGCTTTGGAAACATGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
CDS-3UTR CAA 90 bp CCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATAAATCCTGCTCAAATTaGTACGCTCCACCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: PSWSKAALYRPILAFNSNKSCSN*YAPPPV
Trigger: CACTGGAGGTGGAGCGTACAAATTTGAGCAGGATTT...ATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000497424.5
CDS-3UTR CAA 90 bp CTCGTACTAGTTTATCCACTTTGGTGCTATCTCCACGAGATGCCATTTCAAGAGGGAGGCTGCAGAGCCTaGGGGTTTTCCCTCCTGGTC +
Preference number: 5 (lower is better)
Translates to: LVLVYPLWCYLHEMPFQEGGCRA*GFSLLV
Trigger: GACCAGGAGGGAAAACCCCAAGGCTCTGCAGCCTCC...CTCTTGAAATGGCATCTCGTGGAGATAGCACCAAAGTGGATAAACTAGTACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643504.2
CDS-3UTR CAA 90 bp TGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAATGAGCCCAGGTGCCCTCATGGTGGTGCCATCTTaGGTGCCTGGGTACTGGAGG +
Preference number: 5 (lower is better)
Translates to: CLFGVSKSRSPQMSPGALMVVPS*VPGYWR
Trigger: CCTCCAGTACCCAGGCACCAAAGATGGCACCACCAT...GAGGGCACCTGGGCTCATTTGTGGACTACGTGATTTTGAGACTCCAAATAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp GTGGCCCTGCTGACTCATGTTAGTCCTCCAGATTGTGCTGCTTCTGCCAGTGTAAGAGGTAAGGGGTGGTaGAAGTGTTCCCTGGAAATC +
Preference number: 5 (lower is better)
Translates to: VALLTHVSPPDCAASASVRGKGW*KCSLEI
Trigger: GATTTCCAGGGAACACTTCAACCACCCCTTACCTCT...TACACTGGCAGAAGCAGCACAATCTGGAGGACTAACATGAGTCAGCAGGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp GGAGGAAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCACGATCTTGCAACCAATaGTGGGCAACCTCAATTCAG +
Preference number: 5 (lower is better)
Translates to: GGSSKRGRRGHQQRLPNSRSCNQ*WATSIQ
Trigger: CTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCG...TGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCACACCTTCCAAAAACTGCTaGTTAAGTTTCAGGTACACA +
Preference number: 5 (lower is better)
Translates to: LQGTKLPSTQQPSCSAPTPSKNC*LSFRYT
Trigger: TGTGTACCTGAAACTTAACAAGCAGTTTTTGGAAGG...TGTGGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp TTCCTCCGTCACTGCTCAACTCTCGGTTATTTTTCTCACCCTACCTTAGAACTCATGGTGGTGCCATCTTaGGTGCCTGGGTACTGGAGG +
Preference number: 5 (lower is better)
Translates to: FLRHCSTLGYFSHPTLELMVVPS*VPGYWR
Trigger: CCTCCAGTACCCAGGCACCAAAGATGGCACCACCAT...GAGTTCTAAGGTAGGGTGAGAAAAATAACCGAGAGTTGAGCAGTGACGGAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGGCTAAGGCAGGAGAATaGCTTGAGCCTGGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: QLNTEQLSSEALPMSDAEAKAGE*LEPGRQ
Trigger: CTGCCTTCCAGGCTCAAGCAATTCTCCTGCCTTAGC...CTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CACAGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGCTTCCTGTGTGGCCGTaGCTGCTCTCCTCACCACCC +
Preference number: 5 (lower is better)
Translates to: HRLNANQSNAQMIAKTILLPVWP*LLSSPP
Trigger: GGGTGGTGAGGAGAGCAGCAACGGCCACACAGGAAG...CAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATGTTGTGCATATGCCTTaGAACAGAGGGAACATCCAT +
Preference number: 5 (lower is better)
Translates to: PSWSKAALYRPILAFNSNVVHMP*NRGNIH
Trigger: ATGGATGTTCCCTCTGTTCAAAGGCATATGCACAAC...ATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp CACAGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGTGCAGTGGCACGATCTaGGCCCACTGCAAGCTCCGC +
Preference number: 5 (lower is better)
Translates to: HRLNANQSNAQMIAKTILCSGTI*AHCKLR
Trigger: GCGGAGCTTGCAGTGGGCCAAGATCGTGCCACTGCA...CAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp AAGCTCAAAGCGAGGCAGAAGGGGACATCAACAGCGTCTTCCCAACTCAGGCACTCAAAATATACCAGCTaGACCAGAGTTCCACCGATA +
Preference number: 5 (lower is better)
Translates to: KLKARQKGTSTASSQLRHSKYTS*TRVPPI
Trigger: TATCGGTGGAACTCTGGTCAAGCTGGTATATTTTGA...GTGCCTGAGTTGGGAAGACGCTGTTGATGTCCCCTTCTGCCTCGCTTTGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACAGTCCACAGATCCCATaGTGGAAGGTTTCAGGAACC +
Preference number: 5 (lower is better)
Translates to: PPCFAHLHAYHSQLCISNSPQIP*WKVSGT
Trigger: GGTTCCTGAAACCTTCCACAATGGGATCTGTGGACT...GTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATAGGTGCATTCTCTCCTaGGGAAAGGCTTTTGAAATT +
Preference number: 5 (lower is better)
Translates to: PSWSKAALYRPILAFNSNRCILS*GKAFEI
Trigger: AATTTCAAAAGCCTTTCCCAAGGAGAGAATGCACCT...ATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp AACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAACATATCAGTTCCCCTaGCCCCAGCTGGAACACGGG +
Preference number: 5 (lower is better)
Translates to: NTEQLSSEALPMSDAEISTYQFP*PQLEHG
Trigger: CCCGTGTTCCAGCTGGGGCAAGGGGAACTGATATGT...TGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp GTGGCCCTGCTGACTCATGTTAGTCCTCCAGATTGTGCTGCTTCTGCCAGTGTATCCTTTTCTGTTAAATaGTGGGAACAGCAAGGGCTG +
Preference number: 5 (lower is better)
Translates to: VALLTHVSPPDCAASASVSFSVK*WEQQGL
Trigger: CAGCCCTTGCTGTTCCCACAATTTAACAGAAAAGGA...TACACTGGCAGAAGCAGCACAATCTGGAGGACTAACATGAGTCAGCAGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTGATGCTAATGACTGCTaGGGGAGACCCAGGACTGAG +
Preference number: 5 (lower is better)
Translates to: LNTEQLSSEALPMSDAEIDANDC*GRPRTE
Trigger: CTCAGTCCTGGGTCTCCCCAAGCAGTCATTAGCATC...AATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp ACTCTCCAGGGGACAAAATTACCCTCCACGCAGCAGCCATCCTGCTCTGCACCCAGTTTAAGTTCATTTTaGTCCCCGCTGATGAAAGTT +
Preference number: 5 (lower is better)
Translates to: TLQGTKLPSTQQPSCSAPSLSSF*SPLMKV
Trigger: AACTTTCATCAGCGGGGACAAAAATGAACTTAAACT...GGGTGCAGAGCAGGATGGCTGCTGCGTGGAGGGTAATTTTGTCCCCTGGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp CCTGAGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTACTGAAGGCTTCTATTTaGTGGGGCAGACATCTTAGC +
Preference number: 5 (lower is better)
Translates to: PEQSFSLQLPPSLLNSRLLKASI*WGRHLS
Trigger: GCTAAGATGTCTGCCCCACAAAATAGAAGCCTTCAG...TAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp TACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCTCATGTTTCCAAAGCTaGAAGCCACAGCCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: YKAGNLYTANPHTAWTCASCFQS*KPQPSL
Trigger: CAGGCTGGGCTGTGGCTTCAAGCTTTGGAAACATGA...GGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp CTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCATGTTTCCAAAGCTaGAAGCCACAGCCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: LNTEQLSSEALPMSDAEISCFQS*KPQPSL
Trigger: CAGGCTGGGCTGTGGCTTCAAGCTTTGGAAACATGA...AATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp TCCAGATTGTGCTGCTTCTGCCAGTGTACCCACTTGCATCAGAACAGTCCGCCCCCTTCCAAAAACTGCTaGTTAAGTTTCAGGTACACA +
Preference number: 5 (lower is better)
Translates to: SRLCCFCQCTHLHQNSPPPSKNC*LSFRYT
Trigger: TGTGTACCTGAAACTTAACAAGCAGTTTTTGGAAGG...GGGCGGACTGTTCTGATGCAAGTGGGTACACTGGCAGAAGCAGCACAATCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp AATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGTGGTCCAAGGCTGCTTaGTACAGGCCCATCCTTGCC +
Preference number: 5 (lower is better)
Translates to: NTKQATYIQQILTLPGHVWSKAA*YRPILA
Trigger: GGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCA...CACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CAAGAAAAGAAGCCCTGTCTCTCCAGACATTCATTCCCAGGATTTAGTGTAAAGTGGTCCAAGGCTGCTTaGTACAGGCCCATCCTTGCC +
Preference number: 5 (lower is better)
Translates to: QEKKPCLSRHSFPGFSVKWSKAA*YRPILA
Trigger: GGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCA...CTTTACACTAAATCCTGGGAATGAATGTCTGGAGAGACAGGGCTTCTTTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp ACATGTTTTACAGTAAGTTCACACACAGGCTTAATGCAAACCAGAGTAATGCACGCAAGTTCACAGGAGTaGGCCCAGGGAGCAGCACCC +
Preference number: 5 (lower is better)
Translates to: TCFTVSSHTGLMQTRVMHASSQE*AQGAAP
Trigger: GGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTGC...GTGCATTACTCTGGTTTGCATTAAGCCTGTGTGTGAACTTACTGTAAAACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp TACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCCAGACAGTCCCGGGTTaGAGTCCAGCTCTACTCTTT +
Preference number: 5 (lower is better)
Translates to: YKAGNLYTANPHTAWTCAQTVPG*SPALLF
Trigger: AAAGAGTAGAGCTGGACTCAAACCCGGGACTGTCTG...GGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp TCCAGATTGTGCTGCTTCTGCCAGTGTACCCACTTGCATCAGAACAGTCCGCCCATACCCAGTGCTTATTaGGAGTCTCAAAATCACGTA +
Preference number: 5 (lower is better)
Translates to: SRLCCFCQCTHLHQNSPPIPSAY*ESQNHV
Trigger: TACGTGATTTTGAGACTCCAAATAAGCACTGGGTAT...GGGCGGACTGTTCTGATGCAAGTGGGTACACTGGCAGAAGCAGCACAATCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp AGCCACGATCTTGCAACCAATTGTGGGCAACCTCAATTCAGATGCCTAGAGAGCAGACTTGTTTGTGCTTaGGGGGAACTCTCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: SHDLATNCGQPQFRCLESRLVCA*GELSSQ
Trigger: CTGAGAAGAGAGTTCCCCCAAAGCACAAACAAGTCT...GCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp AAGGGGTGGTTGAAGTGTTCCCTGGAAATCAGTCAAGGTGATGCTAATGACTGCCAAGCATCAGCACCTTaGGCTTACCATCCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: KGWLKCSLEISQGDANDCQASAP*AYHPVL
Trigger: AAGGACTGGATGGTAAGCCAAAGGTGCTGATGCTTG...GCAGTCATTAGCATCACCTTGACTGATTTCCAGGGAACACTTCAACCACCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp CCCTCCTGGTCCAAGGCTGCTTTGTACAGGCCCATCCTTGCCTTCAACAGCAATTGCCTTGTTTTCCATTaGACAACAGAAATTACCCCA +
Preference number: 5 (lower is better)
Translates to: PSWSKAALYRPILAFNSNCLVFH*TTEITP
Trigger: TGGGGTAATTTCTGTTGTCAAATGGAAAACAAGGCA...ATTGCTGTTGAAGGCAAGGATGGGCCTGTACAAAGCAGCCTTGGACCAGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTCACTGTGACCGTCCATaGAATCCGACTGAGTCAATG +
Preference number: 5 (lower is better)
Translates to: THEIPLALPTYMHIILSSHCDRP*NPTESM
Trigger: CATTGACTCAGTCGGATTCAATGGACGGTCACAGTG...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTTTTCATGTTTCCAAAGCTaGAAGCCACAGCCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: QATYIQQILTLPGHVPLFSCFQS*KPQPSL
Trigger: CAGGCTGGGCTGTGGCTTCAAGCTTTGGAAACATGA...AAAAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp GGCTGTGAAATGAATGCCAGATTCGGTGGCATGGGATTCACTGGTGGCCTATCACTGTCCTTTCTCACTTaGTTTCAGGTAGTACAGTCA +
Preference number: 5 (lower is better)
Translates to: GCEMNARFGGMGFTGGLSLSFLT*FQVVQS
Trigger: TGACTGTACTACCTGAAACAAAGTGAGAAAGGACAG...TGATAGGCCACCAGTGAATCCCATGCCACCGAATCTGGCATTCATTTCACAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp TCCTCCTCCAAGACTAGTACCTGTGACCCGTTTGTAATTATCTTTGGAATATACACATATCAGTTCCCCTaGCCCCAGCTGGAACACGGG +
Preference number: 5 (lower is better)
Translates to: SSSKTSTCDPFVIIFGIYTYQFP*PQLEHG
Trigger: CCCGTGTTCCAGCTGGGGCAAGGGGAACTGATATGT...GTATATTCCAAAGATAATTACAAACGGGTCACAGGTACTAGTCTTGGAGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643504.2
CDS-3UTR CAA 90 bp GAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAAAAATAATGGTGGTGCCATCTTaGGTGCCTGGGTACTGGAGG +
Preference number: 5 (lower is better)
Translates to: EQLSSEALPMSDAEISKIMVVPS*VPGYWR
Trigger: CCTCCAGTACCCAGGCACCAAAGATGGCACCACCAT...TATTTTTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAATGCAAGTTCACAGGAGTaGGCCCAGGGAGCAGCACCC +
Preference number: 5 (lower is better)
Translates to: LNANQSNAQMIAKTILTNASSQE*AQGAAP
Trigger: GGGTGCTGCTCCCTGGGCCAACTCCTGTGAACTTGC...ATTTGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp GGCTGTGAAATGAATGCCAGATTCGGTGGCATGGGATTCACTGGTGGCCTATCAGCTGTAGAGCCCAAATaGTTACAAGATGCAAAGATG +
Preference number: 5 (lower is better)
Translates to: GCEMNARFGGMGFTGGLSAVEPK*LQDAKM
Trigger: CATCTTTGCATCTTGTAACAATTTGGGCTCTACAGC...TGATAGGCCACCAGTGAATCCCATGCCACCGAATCTGGCATTCATTTCACAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp AGCACCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGGGCCCCACCTGCCTAAATATCCAGTaGATAACTGGAAAATGCTGG +
Preference number: 5 (lower is better)
Translates to: STFGLPSSPYFCDCKGPTCLNIQ*ITGKCW
Trigger: CCAGCATTTTCCAGTTATCAACTGGATATTTAGGCA...GGTGGGGCCCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp AGCCACGATCTTGCAACCAATTGTGGGCAACCTCAATTCAGATGCCTAGAGAGCTCAAAATATACCAGCTaGACCAGAGTTCCACCGATA +
Preference number: 5 (lower is better)
Translates to: SHDLATNCGQPQFRCLESSKYTS*TRVPPI
Trigger: TATCGGTGGAACTCTGGTCAAGCTGGTATATTTTGA...GCTCTCTAGGCATCTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp AATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGTCATGTTTCCAAAGCTaGAAGCCACAGCCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: NTKQATYIQQILTLPGHVSCFQS*KPQPSL
Trigger: CAGGCTGGGCTGTGGCTTCAAGCTTTGGAAACATGA...CACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp AACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAAGTCCACAGATCCCATaGTGGAAGGTTTCAGGAACC +
Preference number: 5 (lower is better)
Translates to: NTEQLSSEALPMSDAEISSPQIP*WKVSGT
Trigger: GGTTCCTGAAACCTTCCACAATGGGATCTGTGGACT...TGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp AATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCAGACAGTCCCGGGTTaGAGTCCAGCTCTACTCTTT +
Preference number: 5 (lower is better)
Translates to: NTKQATYIQQILTLPGHVQTVPG*SPALLF
Trigger: AAAGAGTAGAGCTGGACTCAAACCCGGGACTGTCTG...CACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp GAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAAAAATAAGGCAGGAGAATTGCTaGAGCCTGGAAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: EQLSSEALPMSDAEISKIRQENC*SLEGRG
Trigger: ACCTCTGCCTTCCAGGCTCAAGCAATTCTCCTGCCT...TATTTTTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp TCTGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGATGCTAATGACTGCTaGGGGAGACCCAGGACTGAG +
Preference number: 5 (lower is better)
Translates to: SVSPTQIPSAYLESQNHVDANDC*GRPRTE
Trigger: CTCAGTCCTGGGTCTCCCCAAGCAGTCATTAGCATC...TACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp TCTGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAAGGCCAGCCACGATCTaGCAACCAATTGTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: SVSPTQIPSAYLESQNHVRPATI*QPIVGN
Trigger: GTTGCCCACAATTGGTTGCAAGATCGTGGCTGGCCT...TACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp ACATGTTTTACAGTAAGTTCACACACAGGCTTAATGCAAACCAGAGTAATGCACTCTTCTCAGCTCCCTTaGCCAGTCCCAAGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: TCFTVSSHTGLMQTRVMHSSQLP*PVPSLV
Trigger: CACCAGGCTTGGGACTGGCAAAGGGAGCTGAGAAGA...GTGCATTACTCTGGTTTGCATTAAGCCTGTGTGTGAACTTACTGTAAAACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp CTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTCCTCCCAACTTTTCGTaGTTGTTGAGACAGGGTCTT +
Preference number: 5 (lower is better)
Translates to: LNTEQLSSEALPMSDAEIPPNFS*LLRQGL
Trigger: AAGACCCTGTCTCAACAACAACGAAAAGTTGGGAGG...AATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp CTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTCAAGCTCTTGTGTCTTaGATGCAGGAGTTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: LNTEQLSSEALPMSDAEIQALVS*MQEFEQ
Trigger: CTGCTCAAACTCCTGCATCAAAGACACAAGAGCTTG...AATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp AAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGGAAAGCAAGCAGCAGTaGCGGCCGCTTTTTCCTCAG +
Preference number: 5 (lower is better)
Translates to: KIQSRQLIYSKSSHCLDMESKQQ*RPLFPQ
Trigger: CTGAGGAAAAAGCGGCCGCAACTGCTGCTTGCTTTC...CATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646394.1
CDS-3UTR CAA 90 bp AATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCACTGTGACCGTCCATaGAATCCGACTGAGTCAATG +
Preference number: 5 (lower is better)
Translates to: NTKQATYIQQILTLPGHVHCDRP*NPTESM
Trigger: CATTGACTCAGTCGGATTCAATGGACGGTCACAGTG...CACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp CAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGCTGTCCTTTCTCACTTaGTTTCAGGTAGTACAGTCA +
Preference number: 5 (lower is better)
Translates to: QLNTEQLSSEALPMSDAELSFLT*FQVVQS
Trigger: TGACTGTACTACCTGAAACAAAGTGAGAAAGGACAG...CTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp TGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAAATGAGCCCAGGTGCCCTCCTGTCCTTTCTCACTTaGTTTCAGGTAGTACAGTCA +
Preference number: 5 (lower is better)
Translates to: CLFGVSKSRSPQMSPGALLSFLT*FQVVQS
Trigger: TGACTGTACTACCTGAAACAAAGTGAGAAAGGACAG...GAGGGCACCTGGGCTCATTTGTGGACTACGTGATTTTGAGACTCCAAATAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCCAAATACCCAGTGCCTCCCCATGAGTTCTTaGACAGACACTTCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: HLHAYHSQLCISNPNTQCLPMSS*TDTSVL
Trigger: AAGAACTGAAGTGTCTGTCAAAGAACTCATGGGGAG...GCACTGGGTATTTGGGTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp ACTCATGAAATCCCCCTTGCTTTGCCCACCTACATGCATATCATTCTCAGCTCTCTCCCCATGAGTTCTTaGACAGACACTTCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: THEIPLALPTYMHIILSSLPMSS*TDTSVL
Trigger: AAGAACTGAAGTGTCTGTCAAAGAACTCATGGGGAG...AGAGCTGAGAATGATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTCATGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CAAGAAAAGAAGCCCTGTCTCTCCAGACATTCATTCCCAGGATTTAGTGTAAAGTGTACAGGCCCATCCTaGCCTTCAACAGCAATATGG +
Preference number: 5 (lower is better)
Translates to: QEKKPCLSRHSFPGFSVKCTGPS*PSTAIW
Trigger: CCATATTGCTGTTGAAGGCAAGGATGGGCCTGTACA...CTTTACACTAAATCCTGGGAATGAATGTCTGGAGAGACAGGGCTTCTTTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp AGTCAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCATCAAAATATACCAGCTaGACCAGAGTTCCACCGATA +
Preference number: 5 (lower is better)
Translates to: SQLNTEQLSSEALPMSDASKYTS*TRVPPI
Trigger: TATCGGTGGAACTCTGGTCAAGCTGGTATATTTTGA...TGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp AGTCAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCATCAGCAGTGATGTCTTaGGGTTCAAAATATACCAGC +
Preference number: 5 (lower is better)
Translates to: SQLNTEQLSSEALPMSDASAVMS*GSKYTS
Trigger: GCTGGTATATTTTGAACCCAAAGACATCACTGCTGA...TGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp AAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGCACTGTGACCGTCCATaGAATCCGACTGAGTCAATG +
Preference number: 5 (lower is better)
Translates to: KIQSRQLIYSKSSHCLDMHCDRP*NPTESM
Trigger: CATTGACTCAGTCGGATTCAATGGACGGTCACAGTG...CATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp TACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTAGTTTATCCACTTaGGTGCTATCTCCACGAGAT +
Preference number: 5 (lower is better)
Translates to: YKAGNLYTANPHTAWTCATSLST*VLSPRD
Trigger: ATCTCGTGGAGATAGCACCAAAGTGGATAAACTAGT...GGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTCATGTTTCCAAAGCTaGAAGCCACAGCCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKSCFQS*KPQPSL
Trigger: CAGGCTGGGCTGTGGCTTCAAGCTTTGGAAACATGA...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp AAAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATTCATGTTTCCAAAGCTaGAAGCCACAGCCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: KNTKQATYIQQILTLPGHSCFQS*KPQPSL
Trigger: CAGGCTGGGCTGTGGCTTCAAGCTTTGGAAACATGA...ATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp AGTCAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCACTGTCCTTTCTCACTTaGTTTCAGGTAGTACAGTCA +
Preference number: 5 (lower is better)
Translates to: SQLNTEQLSSEALPMSDALSFLT*FQVVQS
Trigger: TGACTGTACTACCTGAAACAAAGTGAGAAAGGACAG...TGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp AATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGAAATCCTGCTCAAATTaGTACGCTCCACCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: NTKQATYIQQILTLPGHVKSCSN*YAPPPV
Trigger: CACTGGAGGTGGAGCGTACAAATTTGAGCAGGATTT...CACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000621507.1
ENST00000646394.1
CDS-3UTR CAA 90 bp CTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAATAGGCAGGAGAATTGCTaGAGCCTGGAAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: LNANQSNAQMIAKTILTNRQENC*SLEGRG
Trigger: ACCTCTGCCTTCCAGGCTCAAGCAATTCTCCTGCCT...ATTTGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAATAGGCCAGCCACGATCTaGCAACCAATTGTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: LNANQSNAQMIAKTILTNRPATI*QPIVGN
Trigger: GTTGCCCACAATTGGTTGCAAGATCGTGGCTGGCCT...ATTTGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp AGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAGGTCTTCCTAGAGTGTaGCTGGTAACTATCGCCTCT +
Preference number: 5 (lower is better)
Translates to: RLNANQSNAQMIAKTILTGLPRV*LVTIAS
Trigger: AGAGGCGATAGTTACCAGCAACACTCTAGGAAGACC...TGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp GTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTCTCTTGCTGGGACAGGAGAATaGATTGAACCCGGGAGACAG +
Preference number: 5 (lower is better)
Translates to: VLSHFVSGSTVMKLSKSLAGTGE*IEPGRQ
Trigger: CTGTCTCCCGGGTTCAATCAATTCTCCTGTCCCAGC...AAGAGACTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp AACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCATCAGCAGTGATGTCTTaGGGTTCAAAATATACCAGC +
Preference number: 5 (lower is better)
Translates to: NTEQLSSEALPMSDAEISSAVMS*GSKYTS
Trigger: GCTGGTATATTTTGAACCCAAAGACATCACTGCTGA...TGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp CAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCACTTTTTACTAGTTTATCCACTTaGGTGCTATCTCCACGAGAT +
Preference number: 5 (lower is better)
Translates to: QATYIQQILTLPGHVPLFTSLST*VLSPRD
Trigger: ATCTCGTGGAGATAGCACCAAAGTGGATAAACTAGT...AAAAAGTGGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp ACATGTTTTACAGTAAGTTCACACACAGGCTTAATGCAAACCAGAGTAATGCACAGTCCACAGATCCCATaGTGGAAGGTTTCAGGAACC +
Preference number: 5 (lower is better)
Translates to: TCFTVSSHTGLMQTRVMHSPQIP*WKVSGT
Trigger: GGTTCCTGAAACCTTCCACAATGGGATCTGTGGACT...GTGCATTACTCTGGTTTGCATTAAGCCTGTGTGTGAACTTACTGTAAAACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR CAA 90 bp TACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGTGCCCCTTCCAAAAACTGCTaGTTAAGTTTCAGGTACACA +
Preference number: 5 (lower is better)
Translates to: YKAGNLYTANPHTAWTCAPSKNC*LSFRYT
Trigger: TGTGTACCTGAAACTTAACAAGCAGTTTTTGGAAGG...GGCACATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR CAA 90 bp AGTCAACTGAACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCACCTTCCAAAAACTGCTaGTTAAGTTTCAGGTACACA +
Preference number: 5 (lower is better)
Translates to: SQLNTEQLSSEALPMSDAPSKNC*LSFRYT
Trigger: TGTGTACCTGAAACTTAACAAGCAGTTTTTGGAAGG...TGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTTCAGTTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR CAA 90 bp TGTATCTCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTAAATCCTGCTCAAATTaGTACGCTCCACCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: CISNPNTQCLFGVSKSRSKSCSN*YAPPPV
Trigger: CACTGGAGGTGGAGCGTACAAATTTGAGCAGGATTT...ACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGAGATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316562.9
ENST00000497424.5
CDS-3UTR CAA 90 bp ACATGTTTTACAGTAAGTTCACACACAGGCTTAATGCAAACCAGAGTAATGCACTGTACAGGCCCATCCTaGCCTTCAACAGCAATATGG +
Preference number: 5 (lower is better)
Translates to: TCFTVSSHTGLMQTRVMHCTGPS*PSTAIW
Trigger: CCATATTGCTGTTGAAGGCAAGGATGGGCCTGTACA...GTGCATTACTCTGGTTTGCATTAAGCCTGTGTGTGAACTTACTGTAAAACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp CACCTACATGCATATCATTCTCAGCTCTGTATCTCCAACCCAAATACCCAGTGCATACCCAGTGCTTATTaGGAGTCTCAAAATCACGTA +
Preference number: 5 (lower is better)
Translates to: HLHAYHSQLCISNPNTQCIPSAY*ESQNHV
Trigger: TACGTGATTTTGAGACTCCAAATAAGCACTGGGTAT...GCACTGGGTATTTGGGTTGGAGATACAGAGCTGAGAATGATATGCATGTAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGGAAATCCCCCTTGCTTaGCCCACCTACATGCATATC +
Preference number: 5 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKEIPLA*PTYMHI
Trigger: GATATGCATGTAGGTGGGCAAAGCAAGGGGGATTTC...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp TCCAACCCAAATACCCAGTGCTTATTTGGAGTCTCAAAATCACGTAGTCCACAATCAGCAGTGATGTCTTaGGGTTCAAAATATACCAGC +
Preference number: 5 (lower is better)
Translates to: SNPNTQCLFGVSKSRSPQSAVMS*GSKYTS
Trigger: GCTGGTATATTTTGAACCCAAAGACATCACTGCTGA...TTGTGGACTACGTGATTTTGAGACTCCAAATAAGCACTGGGTATTTGGGTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp AACACAGAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCACCTTCCAAAAACTGCTaGTTAAGTTTCAGGTACACA +
Preference number: 5 (lower is better)
Translates to: NTEQLSSEALPMSDAEISPSKNC*LSFRYT
Trigger: TGTGTACCTGAAACTTAACAAGCAGTTTTTGGAAGG...TGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTCTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR CAA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGAAATCCTGCTCAAATTaGTACGCTCCACCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKKSCSN*YAPPPV
Trigger: CACTGGAGGTGGAGCGTACAAATTTGAGCAGGATTT...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000621507.1
ENST00000646394.1
CDS-3UTR CAA 90 bp AAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGCTCCCCATGAGTTCTTaGACAGACACTTCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: KIQSRQLIYSKSSHCLDMLPMSS*TDTSVL
Trigger: AAGAACTGAAGTGTCTGTCAAAGAACTCATGGGGAG...CATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp GAGCAGCTCTCTTCAGAAGCACTTCCAATGAGTGATGCAGAGATTTCAAAAATATCCTTTTCTGTTAAATaGTGGGAACAGCAAGGGCTG +
Preference number: 5 (lower is better)
Translates to: EQLSSEALPMSDAEISKISFSVK*WEQQGL
Trigger: CAGCCCTTGCTGTTCCCACAATTTAACAGAAAAGGA...TATTTTTGAAATCTCTGCATCACTCATTGGAAGTGCTTCTGAAGAGAGCTGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp AGCAGTCGTTTTCTTTGCAGCTTCCTCCGTCACTGCTCAACTCTCGGTTATTTTAAGAAAAAGAGGGGCTaGTGTAGTAAACCTTACTTT +
Preference number: 5 (lower is better)
Translates to: SSRFLCSFLRHCSTLGYFKKKRG*CSKPYF
Trigger: AAAGTAAGGTTTACTACACAAGCCCCTCTTTTTCTT...AAAATAACCGAGAGTTGAGCAGTGACGGAGGAAGCTGCAAAGAAAACGACTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp TCCTCCTCCAAGACTAGTACCTGTGACCCGTTTGTAATTATCTTTGGAATATACTCAAAATATACCAGCTaGACCAGAGTTCCACCGATA +
Preference number: 5 (lower is better)
Translates to: SSSKTSTCDPFVIIFGIYSKYTS*TRVPPI
Trigger: TATCGGTGGAACTCTGGTCAAGCTGGTATATTTTGA...GTATATTCCAAAGATAATTACAAACGGGTCACAGGTACTAGTCTTGGAGGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
CDS-3UTR CAA 90 bp AGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACATCAAAATATACCAGCTaGACCAGAGTTCCACCGATA +
Preference number: 5 (lower is better)
Translates to: RLNANQSNAQMIAKTILTSKYTS*TRVPPI
Trigger: TATCGGTGGAACTCTGGTCAAGCTGGTATATTTTGA...TGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR CAA 90 bp AGGCTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACATCAGCAGTGATGTCTTaGGGTTCAAAATATACCAGC +
Preference number: 5 (lower is better)
Translates to: RLNANQSNAQMIAKTILTSAVMS*GSKYTS
Trigger: GCTGGTATATTTTGAACCCAAAGACATCACTGCTGA...TGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
CDS-3UTR CAA 90 bp TCCTCCTCCAAGACTAGTACCTGTGACCCGTTTGTAATTATCTTTGGAATATACACTAGTTTATCCACTTaGGTGCTATCTCCACGAGAT +
Preference number: 5 (lower is better)
Translates to: SSSKTSTCDPFVIIFGIYTSLST*VLSPRD
Trigger: ATCTCGTGGAGATAGCACCAAAGTGGATAAACTAGT...GTATATTCCAAAGATAATTACAAACGGGTCACAGGTACTAGTCTTGGAGGAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336066.8
ENST00000643504.2
CDS-3UTR CAA 90 bp CTTAATGCAAACCAGAGTAATGCACAGATGATTGCCAAGACCATATTGACAAATCGATCTTGCAACCAATaGTGGGCAACCTCAATTCAG +
Preference number: 5 (lower is better)
Translates to: LNANQSNAQMIAKTILTNRSCNQ*WATSIQ
Trigger: CTGAATTGAGGTTGCCCACAATTGGTTGCAAGATCG...ATTTGTCAATATGGTCTTGGCAATCATCTGTGCATTACTCTGGTTTGCATTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp AAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGCTCTGTGCACACACTTaGAAAAGAAAATGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: KIQSRQLIYSKSSHCLDMLCAHT*KRKCFW
Trigger: CCAGAAGCATTTTCTTTTCAAAGTGTGTGCACAGAG...CATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS-3UTR CAA 90 bp AAAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATTCAGCAGTGATGTCTTaGGGTTCAAAATATACCAGC +
Preference number: 5 (lower is better)
Translates to: KNTKQATYIQQILTLPGHSAVMS*GSKYTS
Trigger: GCTGGTATATTTTGAACCCAAAGACATCACTGCTGA...ATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGTCAGCAGTGATGTCTTaGGGTTCAAAATATACCAGC +
Preference number: 5 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKSAVMS*GSKYTS
Trigger: GCTGGTATATTTTGAACCCAAAGACATCACTGCTGA...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp AAAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATACTAGTTTATCCACTTaGGTGCTATCTCCACGAGAT +
Preference number: 5 (lower is better)
Translates to: KNTKQATYIQQILTLPGHTSLST*VLSPRD
Trigger: ATCTCGTGGAGATAGCACCAAAGTGGATAAACTAGT...ATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGACTAGTTTATCCACTTaGGTGCTATCTCCACGAGAT +
Preference number: 5 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKTSLST*VLSPRD
Trigger: ATCTCGTGGAGATAGCACCAAAGTGGATAAACTAGT...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp ACACCTGTCCTTTCTCACTTTGTTTCAGGTAGTACAGTCATGAAATTGAGTAAGCTGTCCTTTCTCACTTaGTTTCAGGTAGTACAGTCA +
Preference number: 5 (lower is better)
Translates to: TPVLSHFVSGSTVMKLSKLSFLT*FQVVQS
Trigger: TGACTGTACTACCTGAAACAAAGTGAGAAAGGACAG...CTTACTCAATTTCATGACTGTACTACCTGAAACAAAGTGAGAAAGGACAGGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000497424.5
ENST00000621507.1
ENST00000643504.2
ENST00000646394.1
CDS-3UTR CAA 90 bp AAAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATAGGTGCATTCTCTCCTaGGGAAAGGCTTTTGAAATT +
Preference number: 5 (lower is better)
Translates to: KNTKQATYIQQILTLPGHRCILS*GKAFEI
Trigger: AATTTCAAAAGCCTTTCCCAAGGAGAGAATGCACCT...ATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS-3UTR CAA 90 bp AAAATACAAAGCAGGCAACTTATATACAGCAAATCCTCACACTGCCTGGACATGATACCCAGTGCTTATTaGGAGTCTCAAAATCACGTA +
Preference number: 5 (lower is better)
Translates to: KIQSRQLIYSKSSHCLDMIPSAY*ESQNHV
Trigger: TACGTGATTTTGAGACTCCAAATAAGCACTGGGTAT...CATGTCCAGGCAGTGTGAGGATTTGCTGTATATAAGTTGCCTGCTTTGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000643504.2
CDS GCA 72 bp GCTCCCCAGCCGACGAGACGGAGGTGGCGGAAGCCCTaGCGTGGCGCTCCATGGGCGCGCCGAGCCGGCCCC +
Preference number: 6 (lower is better)
Translates to: APQPTRRRWRKP*RGAPWARRAGP
Trigger: GGGGCCGGCTCGGCGCGCCCATGGAGCGCCACGGCAGGGCTTCCGCCACCTCCGTCTCGTCGGCTGGGGAGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000610179.7
ENST00000643504.2
CDS CCA 72 bp CCAGCCGACGAGACGGAGGTGGCGGAAGCCCTGCCGTaGCGCTCCATGGGCGCGCCGAGCCGGCCCCCTCCC +
Preference number: 6 (lower is better)
Translates to: PADETEVAEALP*RSMGAPSRPPP
Trigger: GGGAGGGGGCCGGCTCGGCGCGCCCATGGAGCGCCACGGCAGGGCTTCCGCCACCTCCGTCTCGTCGGCTGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000610179.7
ENST00000643504.2
CDS CCA 72 bp CCCCGGCCGCCTGCTCCCCAGCCGACGAGACGGAGGTaGCGGAAGCCCTGCCGTGGCGCTCCATGGGCGCGC +
Preference number: 6 (lower is better)
Translates to: PRPPAPQPTRRR*RKPCRGAPWAR
Trigger: GCGCGCCCATGGAGCGCCACGGCAGGGCTTCCGCCACCTCCGTCTCGTCGGCTGGGGAGCAGGCGGCCGGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000610179.7
ENST00000643504.2
CDS CCA 72 bp AGACGGAGGTGGCGGAAGCCCTGCCGTGGCGCTCCATaGGCGCGCCGAGCCGGCCCCCTCCCATCCGCAGCA +
Preference number: 6 (lower is better)
Translates to: RRRWRKPCRGAP*ARRAGPLPSAA
Trigger: TGCTGCGGATGGGAGGGGGCCGGCTCGGCGCGCCCATGGAGCGCCACGGCAGGGCTTCCGCCACCTCCGTCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000610179.7
ENST00000643504.2
CDS GCA 72 bp TGGGGCCGCTGTAAGAGCCCAGTCGATCCCGCCTCGTaGCCTCAGCCGAGGCCCCGACCGCGGGCACCGACG +
Preference number: 6 (lower is better)
Translates to: WGRCKSPVDPAS*PQPRPRPRAPT
Trigger: CGTCGGTGCCCGCGGTCGGGGCCTCGGCTGAGGGCACGAGGCGGGATCGACTGGGCTCTTACAGCGGCCCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000610179.7
ENST00000643504.2
CDS CAA 90 bp GTCCAGCCAGAGCAGAGGCGCGCCCTCGGCCGGCCGCCTCTTCCGTaGCGCCAACGCGCAGGAAGCCAATCCGACGAGGCTGGGGACGGC +
Preference number: 6 (lower is better)
Translates to: VQPEQRRALGRPPLP*RQRAGSQSDEAGDG
Trigger: GCCGTCCCCAGCCTCGTCGGATTGGCTTCCTGCGCGTTGGCGCAACGGAAGAGGCGGCCGGCCGAGGGCGCGCCTCTGCTCTGGCTGGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS GCA 72 bp AGCAGAGGCGCGCCCTCGGCCGGCCGCCTCTTCCGTTaGGCCAACGCGCAGGAAGCCAATCCGACGAGGCTG +
Preference number: 6 (lower is better)
Translates to: SRGAPSAGRLFR*ANAQEANPTRL
Trigger: CAGCCTCGTCGGATTGGCTTCCTGCGCGTTGGCGCAACGGAAGAGGCGGCCGGCCGAGGGCGCGCCTCTGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS CCA 72 bp TCCTCAGGCTTTCGACGCGCTGGCGGGAGACCGAGGTaGGGCCGCTGTAAGAGCCCAGTCGATCCCGCCTCG +
Preference number: 6 (lower is better)
Translates to: SSGFRRAGGRPR*GRCKSPVDPAS
Trigger: CGAGGCGGGATCGACTGGGCTCTTACAGCGGCCCCACCTCGGTCTCCCGCCAGCGCGTCGAAAGCCTGAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316562.9
ENST00000336066.8
ENST00000610179.7
ENST00000643504.2
CDS CCA 72 bp GAGAGTGATGGCGGCGCCGCCCAATGGACGCGTGGGTaGAAGGGCCCGAGCCTCCTCATCCACCCCCTCCTT +
Preference number: 6 (lower is better)
Translates to: ESDGGAAQWTRG*KGPSLLIHPLL
Trigger: AAGGAGGGGGTGGATGAGGAGGCTCGGGCCCTTCCACCCACGCGTCCATTGGGCGGCGCCGCCATCACTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS CCA 72 bp GTTGCGCCAACGCGCAGGAAGCCAATCCGACGAGGCTaGGGACGGCCCAAAGGCCTCGCGTCCAGTCGGCTC +
Preference number: 6 (lower is better)
Translates to: VAPTRRKPIRRG*GRPKGLASSRL
Trigger: GAGCCGACTGGACGCGAGGCCTTTGGGCCGTCCCCAGCCTCGTCGGATTGGCTTCCTGCGCGTTGGCGCAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS CCA 72 bp TGTAGCCCAGAAGAGAGTGATGGCGGCGCCGCCCAATaGACGCGTGGGTGGAAGGGCCCGAGCCTCCTCATC +
Preference number: 6 (lower is better)
Translates to: CSPEESDGGAAQ*TRGWKGPSLLI
Trigger: GATGAGGAGGCTCGGGCCCTTCCACCCACGCGTCCATTGGGCGGCGCCGCCATCACTCTCTTCTGGGCTACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS TCA 72 bp CCTAACTCGAGGAGGATTGACCGTGCCTCCGTCCAATaGGAGGCTATCGTGACGGGGCGGGGAGAGGGTGGT +
Preference number: 6 (lower is better)
Translates to: PNSRRIDRASVQ*EAIVTGRGEGG
Trigger: ACCACCCTCTCCCCGCCCCGTCACGATAGCCTCTCATTGGACGGAGGCACGGTCAATCCTCCTCGAGTTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316562.9
CDS CCA 72 bp AAAGCTCTTAGTAGACGACTGCCAGGTCGGGCACAATaGCTCCCGTCTATATCCCAGCACTTTGGGAGGCCG +
Preference number: 6 (lower is better)
Translates to: KALSRRLPGRAQ*LPSISQHFGRP
Trigger: CGGCCTCCCAAAGTGCTGGGATATAGACGGGAGCCATTGTGCCCGACCTGGCAGTCGTCTACTAAGAGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471830.1
ENST00000643504.2
CDS CCA 72 bp GAAAATCCTGCTCAAATTTGTACGCTCCACCTCCAGTaGCACAAAAGACAGTGTGGAGACTCGAGAAGTTTT +
Preference number: 6 (lower is better)
Translates to: ENPAQICTLHLQ*HKRQCGDSRSF
Trigger: AAAACTTCTCGAGTCTCCACACTGTCTTTTGTGCCACTGGAGGTGGAGCGTACAAATTTGAGCAGGATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316562.9
ENST00000497424.5
ENST00000610179.7
ENST00000621507.1
ENST00000646394.1