Pregenerated sensors for PANK1 (Homo sapiens)
Ensembl gene IDs: ENSG00000152782Ensembl transcript IDs: ENST00000307534.8, ENST00000307534.9, ENST00000322191.10, ENST00000342512.3, ENST00000461829.1, ENST00000488482.1
Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACAAGTCCTTCCACAGTTGGGCCAGCTTCCTCTTTCTCACTACCTaGTTTCTGTCTCATGAACCAGGCTCCAGCTATAGCAAAGAGCTT | + |
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Preference number: 1 (lower is better) Translates to: DKSFHSWASFLFLTT*FLSHEPGSSYSKEL Trigger: AAGCTCTTTGCTATAGCTGGAGCCTGGTTCATGAGACAGAAACCAGGTAGTGAGAAAGAGGAAGCTGGCCCAACTGTGGAAGGACTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR CCA 90 bp | TTTGATGGCTCCACAGTGACTACGGAAAAGTCCGCAATGTTAGCATaGAAGACAAGTCCTTCCACAGTTGGGCCAGCTTCCTCTTTCTCA | + |
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Preference number: 1 (lower is better) Translates to: FDGSTVTTEKSAMLA*KTSPSTVGPASSFS Trigger: TGAGAAAGAGGAAGCTGGCCCAACTGTGGAAGGACTTGTCTTCCATGCTAACATTGCGGACTTTTCCGTAGTCACTGTGGAGCCATCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR CCA 90 bp | CCTATTCTTTGGTTAAGACTTCACAAAACCTTCTCTAGCACCTTCTaGAAGACAAATGACCAACCTCTCTTCTGGGTAGAGGCCACTACC | + |
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Preference number: 1 (lower is better) Translates to: PILWLRLHKTFSSTF*KTNDQPLFWVEATT Trigger: GGTAGTGGCCTCTACCCAGAAGAGAGGTTGGTCATTTGTCTTCCAGAAGGTGCTAGAGAAGGTTTTGTGAAGTCTTAACCAAAGAATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR CCA 90 bp | CCAACACTGCATCTCCCACCACTTTCTATTTTTAACTCCAGACACTaGCCTCTTTGCAGTTCCTCAAATCCCTATTTTCATTTGCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: PTLHLPPLSIFNSRH*PLCSSSNPYFHLPG Trigger: TCCTGGCAAATGAAAATAGGGATTTGAGGAACTGCAAAGAGGCCAGTGTCTGGAGTTAAAAATAGAAAGTGGTGGGAGATGCAGTGTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR TCA 90 bp | GTGTGGACAAGGAGCTGTGGATATGTATTAGCATACGGAGATTGGTaGAACATCTCCATACTAACATGGGTTTCCCACAATCCAGAAAGT | + |
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Preference number: 1 (lower is better) Translates to: VWTRSCGYVLAYGDW*NISILTWVSHNPES Trigger: ACTTTCTGGATTGTGGGAAACCCATGTTAGTATGGAGATGTTTCACCAATCTCCGTATGCTAATACATATCCACAGCTCCTTGTCCACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR TCA 90 bp | GGTGGCAAGAATGAAAGCAAGGTGAGCCCATCATTCCTTAAAAGTTaGGGCCATGACTTAATCATACTTGCATTTTATGATCATCTGACT | + |
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Preference number: 1 (lower is better) Translates to: GGKNESKVSPSFLKS*GHDLIILAFYDHLT Trigger: AGTCAGATGATCATAAAATGCAAGTATGATTAAGTCATGGCCTCAACTTTTAAGGAATGATGGGCTCACCTTGCTTTCATTCTTGCCACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR GCA 90 bp | AGAGCCCTACTACATGTGAGAAATAATGCTCAAGTCAGCTTTTGCTaGCAAGTGAGCTGTCAAGATAGATTTCTTAAGTATGGGATTTTG | + |
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Preference number: 1 (lower is better) Translates to: RALLHVRNNAQVSFC*QVSCQDRFLKYGIL Trigger: CAAAATCCCATACTTAAGAAATCTATCTTGACAGCTCACTTGGCAGCAAAAGCTGACTTGAGCATTATTTCTCACATGTAGTAGGGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR GCA 90 bp | ATCCCTTTCAACAATAAGCTCAATACACAAGATCATGGGATCTCATaGATCCCAATATTTGTACATGACCCTCATTTGAAAGTTACCCAT | + |
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Preference number: 1 (lower is better) Translates to: IPFNNKLNTQDHGIS*IPIFVHDPHLKVTH Trigger: ATGGGTAACTTTCAAATGAGGGTCATGTACAAATATTGGGATGCATGAGATCCCATGATCTTGTGTATTGAGCTTATTGTTGAAAGGGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
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| 3UTR TCA 90 bp | CAATACACAAGATCATGGGATCTCATGCATCCCAATATTTGTACATaGCCCTCATTTGAAAGTTACCCATCAGTCTTAATGAAATCTTTC | + |
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Preference number: 1 (lower is better) Translates to: QYTRSWDLMHPNICT*PSFESYPSVLMKSF Trigger: GAAAGATTTCATTAAGACTGATGGGTAACTTTCAAATGAGGGTCATGTACAAATATTGGGATGCATGAGATCCCATGATCTTGTGTATTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
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| 3UTR TCA 90 bp | ACTCATTTACTTCAACAGAGCATTTTGCTTTACCACTTTGAAACCTaGTTATTTCTAGTTTCACTTTCCTTGAAACTCTTTGATGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: THLLQQSILLYHFET*LFLVSLSLKLFDGS Trigger: GGAGCCATCAAAGAGTTTCAAGGAAAGTGAAACTAGAAATAATCAGGTTTCAAAGTGGTAAAGCAAAATGCTCTGTTGAAGTAAATGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR CCA 90 bp | ACTAATGAAATCTTTTTCACAAATGTGGCGTCATCTTCTGATCACTaGGAGGAAAACTGCTTTCTAACAATTCTTGTGAGTGATAGTTTA | + |
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Preference number: 1 (lower is better) Translates to: TNEIFFTNVASSSDH*EENCFLTILVSDSL Trigger: TAAACTATCACTCACAAGAATTGTTAGAAAGCAGTTTTCCTCCCAGTGATCAGAAGATGACGCCACATTTGTGAAAAAGATTTCATTAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR GCA 90 bp | CATGGAAGACAAGTCCTTCCACAGTTGGGCCAGCTTCCTCTTTCTCACTACCTGAGGGGCTGTATCCTATaGATCTTAGTCTCCAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: HGRQVLPQLGQLPLSHYLRGCIL*ILVSSS Trigger: GGAACTGGAGACTAAGATGCATAGGATACAGCCCCT...CAGGTAGTGAGAAAGAGGAAGCTGGCCCAACTGTGGAAGGACTTGTCTTCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR GCA 90 bp | CATGGAAGACAAGTCCTTCCACAGTTGGGCCAGCTTCCTCTTTCTCACTACCTGAGGTGCCCACCACCATaGCTAGCTTTTTGTATTTTC | + |
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Preference number: 2 (lower is better) Translates to: HGRQVLPQLGQLPLSHYLRCPPP*LAFCIF Trigger: GAAAATACAAAAAGCTAGGCATGGTGGTGGGCACCT...CAGGTAGTGAGAAAGAGGAAGCTGGCCCAACTGTGGAAGGACTTGTCTTCCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR GCA 90 bp | CATGGAAGACAAGTCCTTCCACAGTTGGGCCAGCTTCCTCTTTCTCACTACCTGAGACACTGGCCTCTTTaGAGTTCCTCAAATCCCTAT | + |
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Preference number: 2 (lower is better) Translates to: HGRQVLPQLGQLPLSHYLRHWPL*SSSNPY Trigger: ATAGGGATTTGAGGAACTGCAAAGAGGCCAGTGTCT...CAGGTAGTGAGAAAGAGGAAGCTGGCCCAACTGTGGAAGGACTTGTCTTCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR GCA 90 bp | CATGGAAGACAAGTCCTTCCACAGTTGGGCCAGCTTCCTCTTTCTCACTACCTGGTTTACTCCCAACACTaGATCTCCCACCACTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: HGRQVLPQLGQLPLSHYLVYSQH*ISHHFL Trigger: TAGAAAGTGGTGGGAGATGCAGTGTTGGGAGTAAAC...CAGGTAGTGAGAAAGAGGAAGCTGGCCCAACTGTGGAAGGACTTGTCTTCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR CCA 90 bp | CATGGAAGACAAGTCCTTCCACAGTTGGGCCAGCTTCCTCTTTCTCACTACCTGGTGGACAAGGAGCTGTaGATATGTATTAGCATACGG | + |
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Preference number: 2 (lower is better) Translates to: HGRQVLPQLGQLPLSHYLVDKEL*ICISIR Trigger: CCGTATGCTAATACATATCCACAGCTCCTTGTCCAC...CAGGTAGTGAGAAAGAGGAAGCTGGCCCAACTGTGGAAGGACTTGTCTTCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR CCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGTCTGCCATAATGGCTTaGCTTCCGTCCCAAAGCGAC | + |
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Preference number: 2 (lower is better) Translates to: RRCSEGRERKIHHGVIVLSAIMA*LPSQSD Trigger: GTCGCTTTGGGACGGAAGCCAAGCCATTATGGCAGA...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
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| 3UTR-3UTR GCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGTCCAGCAGGTTCATCTaGCATAATGGCTTGGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: RRCSEGRERKIHHGVIVLSSRFI*HNGLAS Trigger: GGAAGCCAAGCCATTATGGCAGATGAACCTGCTGGA...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
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| 3UTR-3UTR CCA 90 bp | CATGGAAGACAAGTCCTTCCACAGTTGGGCCAGCTTCCTCTTTCTCACTACCTGATTGAATGGCACTTGTaGCACTTGATGACTGATGTT | + |
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Preference number: 2 (lower is better) Translates to: HGRQVLPQLGQLPLSHYLIEWHL*HLMTDV Trigger: AACATCAGTCATCAAGTGCCACAAGTGCCATTCAAT...CAGGTAGTGAGAAAGAGGAAGCTGGCCCAACTGTGGAAGGACTTGTCTTCCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTCACCTGAAGACAGTGTTTTGGACCATACCACACTCATGGGAAAGCCTCCATACATGACCCTCATTTaGAAGTTACCCATCAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: ASPEDSVLDHTTLMGKPPYMTLI*KLPISL Trigger: AAGACTGATGGGTAACTTTCAAATGAGGGTCATGTA...TGGAGGCTTTCCCATGAGTGTGGTATGGTCCAAAACACTGTCTTCAGGTGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR TCA 90 bp | CATGGAAGACAAGTCCTTCCACAGTTGGGCCAGCTTCCTCTTTCTCACTACCTGGTGATGACCAAATTTTaGAACTCCTTTGGAATTACC | + |
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Preference number: 2 (lower is better) Translates to: HGRQVLPQLGQLPLSHYLVMTKF*NSFGIT Trigger: GGTAATTCCAAAGGAGTTTCAAAATTTGGTCATCAC...CAGGTAGTGAGAAAGAGGAAGCTGGCCCAACTGTGGAAGGACTTGTCTTCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR GCA 90 bp | CATGGAAGACAAGTCCTTCCACAGTTGGGCCAGCTTCCTCTTTCTCACTACCTGGATCATGGGATCTCATaGATCCCAATATTTGTACAT | + |
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Preference number: 2 (lower is better) Translates to: HGRQVLPQLGQLPLSHYLDHGIS*IPIFVH Trigger: ATGTACAAATATTGGGATGCATGAGATCCCATGATC...CAGGTAGTGAGAAAGAGGAAGCTGGCCCAACTGTGGAAGGACTTGTCTTCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR GCA 90 bp | CATGGAAGACAAGTCCTTCCACAGTTGGGCCAGCTTCCTCTTTCTCACTACCTGCACGATAAAAAGCCATaGTCTTACTTCATATTGCAC | + |
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Preference number: 2 (lower is better) Translates to: HGRQVLPQLGQLPLSHYLHDKKP*SYFILH Trigger: GTGCAATATGAAGTAAGAGCATGGCTTTTTATCGTG...CAGGTAGTGAGAAAGAGGAAGCTGGCCCAACTGTGGAAGGACTTGTCTTCCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCTGTCAGAGTCAGTATCCTGTTATCTAACTCATGACGAGCTTTGCAACAAAGCTCAAGTCAGCTTTTaGTGCCAAGTGAGCTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: PLSESVSCYLTHDELCNKAQVSF*CQVSCQ Trigger: TTGACAGCTCACTTGGCAGCAAAAGCTGACTTGAGC...TTTGTTGCAAAGCTCGTCATGAGTTAGATAACAGGATACTGACTCTGACAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR CCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGAGTTCTCTGTCCTTTTaGGAGGCTGTTTCCTCCACT | + |
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Preference number: 2 (lower is better) Translates to: RRCSEGRERKIHHGVIVLSSLSF*EAVSST Trigger: AGTGGAGGAAACAGCCTCCCAAAAGGACAGAGAACT...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
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| 3UTR-3UTR CCA 90 bp | GCTTCACCTGAAGACAGTGTTTTGGACCATACCACACTCATGGGAAAGCCTCCACAATACACAAGATCATaGGATCTCATGCATCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: ASPEDSVLDHTTLMGKPPQYTRS*DLMHPN Trigger: ATTGGGATGCATGAGATCCCATGATCTTGTGTATTG...TGGAGGCTTTCCCATGAGTGTGGTATGGTCCAAAACACTGTCTTCAGGTGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR TCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGACCCCAGAAGAAAAATaGCCAGCGCTTACATATCAG | + |
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Preference number: 2 (lower is better) Translates to: RRCSEGRERKIHHGVIVLTPEEK*PALTYQ Trigger: CTGATATGTAAGCGCTGGTCATTTTTCTTCTGGGGT...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
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| 3UTR-3UTR TCA 90 bp | GCTTCACCTGAAGACAGTGTTTTGGACCATACCACACTCATGGGAAAGCCTCCACCCAATATTTGTACATaGCCCTCATTTGAAAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: ASPEDSVLDHTTLMGKPPPNICT*PSFESY Trigger: GTAACTTTCAAATGAGGGTCATGTACAAATATTGGG...TGGAGGCTTTCCCATGAGTGTGGTATGGTCCAAAACACTGTCTTCAGGTGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCTGTCAGAGTCAGTATCCTGTTATCTAACTCATGACGAGCTTTGCAACAAATCCTTTGTAGAACCATaGTCTGCGGAATCAAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: PLSESVSCYLTHDELCNKSFVEP*SAESRS Trigger: AGACCTTGATTCCGCAGATCATGGTTCTACAAAGGA...TTTGTTGCAAAGCTCGTCATGAGTTAGATAACAGGATACTGACTCTGACAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCTGTCAGAGTCAGTATCCTGTTATCTAACTCATGACGAGCTTTGCAACAAATGTAGAACCATGATCTaGGGAATCAAGGTCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: PLSESVSCYLTHDELCNKCRTMI*GIKVCC Trigger: ACAGCAGACCTTGATTCCGCAGATCATGGTTCTACA...TTTGTTGCAAAGCTCGTCATGAGTTAGATAACAGGATACTGACTCTGACAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCTGTCAGAGTCAGTATCCTGTTATCTAACTCATGACGAGCTTTGCAACAAACAAGTCAGCTTTTGCTaGCAAGTGAGCTGTCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: PLSESVSCYLTHDELCNKQVSFC*QVSCQD Trigger: ATCTTGACAGCTCACTTGGCAGCAAAAGCTGACTTG...TTTGTTGCAAAGCTCGTCATGAGTTAGATAACAGGATACTGACTCTGACAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCATCTGCCATAATGGCTTaGCTTCCGTCCCAAAGCGAC | + |
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Preference number: 2 (lower is better) Translates to: SNNFSKLMHTIGRFGHAASAIMA*LPSQSD Trigger: GTCGCTTTGGGACGGAAGCCAAGCCATTATGGCAGA...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
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| 3UTR-3UTR CCA 90 bp | GCTTCACCTGAAGACAGTGTTTTGGACCATACCACACTCATGGGAAAGCCTCCAAACTTTGTATTGAGCTaGTCAGCACCTTCATTGATA | + |
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Preference number: 2 (lower is better) Translates to: ASPEDSVLDHTTLMGKPPNFVLS*SAPSLI Trigger: TATCAATGAAGGTGCTGACCAGCTCAATACAAAGTT...TGGAGGCTTTCCCATGAGTGTGGTATGGTCCAAAACACTGTCTTCAGGTGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR CCA 90 bp | CATGGAAGACAAGTCCTTCCACAGTTGGGCCAGCTTCCTCTTTCTCACTACCTGAAGGAAGATTCATCATaGAGTAATTGTTCTGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: HGRQVLPQLGQLPLSHYLKEDSS*SNCSVL Trigger: AAGGACAGAACAATTACTCCATGATGAATCTTCCTT...CAGGTAGTGAGAAAGAGGAAGCTGGCCCAACTGTGGAAGGACTTGTCTTCCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTCACCTGAAGACAGTGTTTTGGACCATACCACACTCATGGGAAAGCCTCCACAAGACTTGAAGATATaGAAATTAAAGACGGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: ASPEDSVLDHTTLMGKPPQDLKI*KLKTVL Trigger: GAGCACCGTCTTTAATTTCCATATCTTCAAGTCTTG...TGGAGGCTTTCCCATGAGTGTGGTATGGTCCAAAACACTGTCTTCAGGTGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCTGTCAGAGTCAGTATCCTGTTATCTAACTCATGACGAGCTTTGCAACAAACTGAAGACAGTGTTTTaGACCATACCACACTCATGG | + |
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Preference number: 2 (lower is better) Translates to: PLSESVSCYLTHDELCNKLKTVF*TIPHSW Trigger: CCATGAGTGTGGTATGGTCCAAAACACTGTCTTCAG...TTTGTTGCAAAGCTCGTCATGAGTTAGATAACAGGATACTGACTCTGACAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCTGTCAGAGTCAGTATCCTGTTATCTAACTCATGACGAGCTTTGCAACAAATGCTTAACTTTGTATTaGGCTGGTCAGCACCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: PLSESVSCYLTHDELCNKCLTLY*AGQHLH Trigger: ATGAAGGTGCTGACCAGCTCAATACAAAGTTAAGCA...TTTGTTGCAAAGCTCGTCATGAGTTAGATAACAGGATACTGACTCTGACAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCTGTCAGAGTCAGTATCCTGTTATCTAACTCATGACGAGCTTTGCAACAAAGAGCCCTACTACATGTaGGAAATAATGCTCAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: PLSESVSCYLTHDELCNKEPYYM*EIMLKS Trigger: TGACTTGAGCATTATTTCTCACATGTAGTAGGGCTC...TTTGTTGCAAAGCTCGTCATGAGTTAGATAACAGGATACTGACTCTGACAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCATCCAGCAGGTTCATCTaGCATAATGGCTTGGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: SNNFSKLMHTIGRFGHAASSRFI*HNGLAS Trigger: GGAAGCCAAGCCATTATGGCAGATGAACCTGCTGGA...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
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| 3UTR-3UTR CCA 90 bp | GCTTCACCTGAAGACAGTGTTTTGGACCATACCACACTCATGGGAAAGCCTCCATTCATATTCTGTGCATaGATGAGGACATTTAATCAC | + |
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Preference number: 2 (lower is better) Translates to: ASPEDSVLDHTTLMGKPPFIFCA*MRTFNH Trigger: GTGATTAAATGTCCTCATCCATGCACAGAATATGAA...TGGAGGCTTTCCCATGAGTGTGGTATGGTCCAAAACACTGTCTTCAGGTGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCTGTCAGAGTCAGTATCCTGTTATCTAACTCATGACGAGCTTTGCAACAAATTAAAATCACCACACTaGTCAGTAAACCCCAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: PLSESVSCYLTHDELCNKLKSPH*SVNPRR Trigger: TCTTCTGGGGTTTACTGATCAGTGTGGTGATTTTAA...TTTGTTGCAAAGCTCGTCATGAGTTAGATAACAGGATACTGACTCTGACAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000307534.8 |
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| 3UTR-3UTR TCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGTATTCTGTGCATGGATaGGGACATTTAATCACAGAC | + |
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Preference number: 2 (lower is better) Translates to: RRCSEGRERKIHHGVIVLYSVHG*GHLITD Trigger: GTCTGTGATTAAATGTCCTCATCCATGCACAGAATA...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
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| 3UTR-3UTR TCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGTACATGACCCTCATTTaGAAGTTACCCATCAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: RRCSEGRERKIHHGVIVLYMTLI*KLPISL Trigger: AAGACTGATGGGTAACTTTCAAATGAGGGTCATGTA...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
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| 3UTR-3UTR CCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAAGTTCTCTGTCCTTTTaGGAGGCTGTTTCCTCCACT | + |
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Preference number: 2 (lower is better) Translates to: SNNFSKLMHTIGRFGHAASSLSF*EAVSST Trigger: AGTGGAGGAAACAGCCTCCCAAAAGGACAGAGAACT...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
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| 3UTR-3UTR CCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGCAATACACAAGATCATaGGATCTCATGCATCCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: RRCSEGRERKIHHGVIVLQYTRS*DLMHPN Trigger: ATTGGGATGCATGAGATCCCATGATCTTGTGTATTG...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
||
| 3UTR CAA 90 bp | GACAGTGTTTTGGACCATACCACACTCATGGGAAAGCCTCCAATTTaGAAATGTAGAGTAGCAAAAACACAACAGACAGTCATTTCATGG | + |
|
Preference number: 2 (lower is better) Translates to: DSVLDHTTLMGKPPI*KCRVAKTQQTVISW Trigger: CCATGAAATGACTGTCTGTTGTGTTTTTGCTACTCTACATTTCAAAATTGGAGGCTTTCCCATGAGTGTGGTATGGTCCAAAACACTGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR-3UTR TCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGGGTCAGCACCTTCATTaGTATGAACAATTATGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: RRCSEGRERKIHHGVIVLGQHLH*YEQLCQ Trigger: TTGACATAATTGTTCATATCAATGAAGGTGCTGACC...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
||
| 3UTR-3UTR TCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGCCCAATATTTGTACATaGCCCTCATTTGAAAGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: RRCSEGRERKIHHGVIVLPNICT*PSFESY Trigger: GTAACTTTCAAATGAGGGTCATGTACAAATATTGGG...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
||
| 3UTR-3UTR GCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGTGCACAAAGATTTGCTaGCATTCATATTCTGTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: RRCSEGRERKIHHGVIVLCTKIC*HSYSVH Trigger: ATGCACAGAATATGAATGGCAGCAAATCTTTGTGCA...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
||
| 3UTR-3UTR GCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGTCTTGCACAAAGATTTaGTGCCATTCATATTCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: RRCSEGRERKIHHGVIVLSCTKI*CHSYSV Trigger: CACAGAATATGAATGGCAGCAAATCTTTGTGCAAGA...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
||
| 3UTR-3UTR TCA 90 bp | AACGACATCAAGTATACATTACCTATAACAATTGTTCCCAACAAAGAGACTCTGACCCCAGAAGAAAAATaGCCAGCGCTTACATATCAG | + |
|
Preference number: 2 (lower is better) Translates to: NDIKYTLPITIVPNKETLTPEEK*PALTYQ Trigger: CTGATATGTAAGCGCTGGTCATTTTTCTTCTGGGGT...CAGAGTCTCTTTGTTGGGAACAATTGTTATAGGTAATGTATACTTGATGTCGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR-3UTR TCA 90 bp | AACGACATCAAGTATACATTACCTATAACAATTGTTCCCAACAAAGAGACTCTGGCTTTTGCTGCCAAGTaGGCTGTCAAGATAGATTTC | + |
|
Preference number: 2 (lower is better) Translates to: NDIKYTLPITIVPNKETLAFAAK*AVKIDF Trigger: GAAATCTATCTTGACAGCTCACTTGGCAGCAAAAGC...CAGAGTCTCTTTGTTGGGAACAATTGTTATAGGTAATGTATACTTGATGTCGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR-3UTR CCA 90 bp | AACGACATCAAGTATACATTACCTATAACAATTGTTCCCAACAAAGAGACTCTGATCTCCATACTAACATaGGTTTCCCACAATCCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: NDIKYTLPITIVPNKETLISILT*VSHNPE Trigger: TTCTGGATTGTGGGAAACCCATGTTAGTATGGAGAT...CAGAGTCTCTTTGTTGGGAACAATTGTTATAGGTAATGTATACTTGATGTCGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR-3UTR GCA 90 bp | AACGACATCAAGTATACATTACCTATAACAATTGTTCCCAACAAAGAGACTCTGTCTTGCACAAAGATTTaGTGCCATTCATATTCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: NDIKYTLPITIVPNKETLSCTKI*CHSYSV Trigger: CACAGAATATGAATGGCAGCAAATCTTTGTGCAAGA...CAGAGTCTCTTTGTTGGGAACAATTGTTATAGGTAATGTATACTTGATGTCGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGGAAGACAAGTCCTTCCACAGTTGGGCCAGCTTCCTCTTTCTCACTACCTGATCTGCCATAATGGCTaGGCTTCCGTCCCAAAGCGA | + |
|
Preference number: 3 (lower is better) Translates to: HGRQVLPQLGQLPLSHYLICHNG*ASVPKR Trigger: TCGCTTTGGGACGGAAGCCAAGCCATTATGGCAGAT...CAGGTAGTGAGAAAGAGGAAGCTGGCCCAACTGTGGAAGGACTTGTCTTCCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR CCA 72 bp | TTCCACAGTTGGGCCAGCTTCCTCTTTCTCACTACCTaGTTTCTGTCTCATGAACCAGGCTCCAGCTATAGC | + |
|
Preference number: 3 (lower is better) Translates to: FHSWASFLFLTT*FLSHEPGSSYS Trigger: GCTATAGCTGGAGCCTGGTTCATGAGACAGAAACCAGGTAGTGAGAAAGAGGAAGCTGGCCCAACTGTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR CCA 72 bp | TCCACAGTGACTACGGAAAAGTCCGCAATGTTAGCATaGAAGACAAGTCCTTCCACAGTTGGGCCAGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: STVTTEKSAMLA*KTSPSTVGPAS Trigger: GGAAGCTGGCCCAACTGTGGAAGGACTTGTCTTCCATGCTAACATTGCGGACTTTTCCGTAGTCACTGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR CCA 72 bp | CGCAATGTTAGCATGGAAGACAAGTCCTTCCACAGTTaGGCCAGCTTCCTCTTTCTCACTACCTGGTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RNVSMEDKSFHS*ASFLFLTTWFL Trigger: CAGAAACCAGGTAGTGAGAAAGAGGAAGCTGGCCCAACTGTGGAAGGACTTGTCTTCCATGCTAACATTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGGAAGACAAGTCCTTCCACAGTTGGGCCAGCTTCCTCTTTCTCACTACCTGATACAATTGGTAGGTTaGGCCACGCTGCACCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: HGRQVLPQLGQLPLSHYLIQLVG*ATLHHF Trigger: AAAATGGTGCAGCGTGGCCAAACCTACCAATTGTAT...CAGGTAGTGAGAAAGAGGAAGCTGGCCCAACTGTGGAAGGACTTGTCTTCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR GCA 72 bp | GATTTTGCTGTCTTTCTCTGCAGGGGCTGTATCCTATaGATCTTAGTCTCCAGTTCCTTCCTGGCACAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: DFAVFLCRGCIL*ILVSSSFLAQS Trigger: ACTCTGTGCCAGGAAGGAACTGGAGACTAAGATGCATAGGATACAGCCCCTGCAGAGAAAGACAGCAAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR GCA 72 bp | GAAAGCAGAGCTCCTGAAGTCTTGTTCACATCGGATTaGATCCTCAGTGCTACCCAATGCCTCTCAGATCAT | + |
|
Preference number: 3 (lower is better) Translates to: ESRAPEVLFTSD*ILSATQCLSDH Trigger: ATGATCTGAGAGGCATTGGGTAGCACTGAGGATGCAATCCGATGTGAACAAGACTTCAGGAGCTCTGCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR CCA 72 bp | TTTACAAATCCAGCAGGTTCATCTGCCATAATGGCTTaGCTTCCGTCCCAAAGCGACTTTCACCTTCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FTNPAGSSAIMA*LPSQSDFHLLQ Trigger: CTGGAGAAGGTGAAAGTCGCTTTGGGACGGAAGCCAAGCCATTATGGCAGATGAACCTGCTGGATTTGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
||
| 3UTR-3UTR CAA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGATCTGCCATAATGGCTaGGCTTCCGTCCCAAAGCGA | + |
|
Preference number: 3 (lower is better) Translates to: RRCSEGRERKIHHGVIVLICHNG*ASVPKR Trigger: TCGCTTTGGGACGGAAGCCAAGCCATTATGGCAGAT...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTGTCAGAGTCAGTATCCTGTTATCTAACTCATGACGAGCTTTGCAACAAACCTGAAGACAGTGTTTaGGACCATACCACACTCATG | + |
|
Preference number: 3 (lower is better) Translates to: PLSESVSCYLTHDELCNKPEDSV*DHTTLM Trigger: CATGAGTGTGGTATGGTCCAAAACACTGTCTTCAGG...TTTGTTGCAAAGCTCGTCATGAGTTAGATAACAGGATACTGACTCTGACAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAATCTGCCATAATGGCTaGGCTTCCGTCCCAAAGCGA | + |
|
Preference number: 3 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAICHNG*ASVPKR Trigger: TCGCTTTGGGACGGAAGCCAAGCCATTATGGCAGAT...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
||
| 3UTR-3UTR CAA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGATACAATTGGTAGGTTaGGCCACGCTGCACCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: RRCSEGRERKIHHGVIVLIQLVG*ATLHHF Trigger: AAAATGGTGCAGCGTGGCCAAACCTACCAATTGTAT...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTGTCAGAGTCAGTATCCTGTTATCTAACTCATGACGAGCTTTGCAACAAAGTGCTTAACTTTGTATaGAGCTGGTCAGCACCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PLSESVSCYLTHDELCNKVLNFV*SWSAPS Trigger: TGAAGGTGCTGACCAGCTCAATACAAAGTTAAGCAC...TTTGTTGCAAAGCTCGTCATGAGTTAGATAACAGGATACTGACTCTGACAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR-3UTR CAA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGGTGCTTAACTTTGTATaGAGCTGGTCAGCACCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: RRCSEGRERKIHHGVIVLVLNFV*SWSAPS Trigger: TGAAGGTGCTGACCAGCTCAATACAAAGTTAAGCAC...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
||
| 3UTR TCA 72 bp | AGGTCACTTCCTAGGAAAGGCTGTCTTAGACCACCCTaGGATATTCCTCCCCTTCTCATTTTTCTGAATAGA | + |
|
Preference number: 3 (lower is better) Translates to: RSLPRKGCLRPP*DIPPLLIFLNR Trigger: TCTATTCAGAAAAATGAGAAGGGGAGGAATATCTCAGGGTGGTCTAAGACAGCCTTTCCTAGGAAGTGACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR CCA 72 bp | TGGTTAAGACTTCACAAAACCTTCTCTAGCACCTTCTaGAAGACAAATGACCAACCTCTCTTCTGGGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: WLRLHKTFSSTF*KTNDQPLFWVE Trigger: CTCTACCCAGAAGAGAGGTTGGTCATTTGTCTTCCAGAAGGTGCTAGAGAAGGTTTTGTGAAGTCTTAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR CCA 72 bp | CCCTCCCTTCCTCTCCACTTAGTGATTCCTATTCTTTaGTTAAGACTTCACAAAACCTTCTCTAGCACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PSLPLHLVIPIL*LRLHKTFSSTF Trigger: GAAGGTGCTAGAGAAGGTTTTGTGAAGTCTTAACCAAAGAATAGGAATCACTAAGTGGAGAGGAAGGGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR GCA 72 bp | GGACCCAGACTGAAGCTGCCTCACGATAAAAAGCCATaGTCTTACTTCATATTGCACAAGGTCAAAATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GPRLKLPHDKKP*SYFILHKVKIL Trigger: AAGAATTTTGACCTTGTGCAATATGAAGTAAGAGCATGGCTTTTTATCGTGAGGCAGCTTCAGTCTGGGTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR TCA 72 bp | AGGAGCTGTGGATATGTATTAGCATACGGAGATTGGTaGAACATCTCCATACTAACATGGGTTTCCCACAAT | + |
|
Preference number: 3 (lower is better) Translates to: RSCGYVLAYGDW*NISILTWVSHN Trigger: ATTGTGGGAAACCCATGTTAGTATGGAGATGTTTCACCAATCTCCGTATGCTAATACATATCCACAGCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR TCA 72 bp | CTTTGCAACAAAACATGTGAAGAGCCCTACTACATGTaGGAAATAATGCTCAAGTCAGCTTTTGCTGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LCNKTCEEPYYM*EIMLKSAFAAK Trigger: CTTGGCAGCAAAAGCTGACTTGAGCATTATTTCTCACATGTAGTAGGGCTCTTCACATGTTTTGTTGCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR CCA 72 bp | CATCTCCCACCACTTTCTATTTTTAACTCCAGACACTaGCCTCTTTGCAGTTCCTCAAATCCCTATTTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: HLPPLSIFNSRH*PLCSSSNPYFH Trigger: ATGAAAATAGGGATTTGAGGAACTGCAAAGAGGCCAGTGTCTGGAGTTAAAAATAGAAAGTGGTGGGAGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR GCA 72 bp | TTCCTTTGTAGAACCATGATCTGCGGAATCAAGGTCTaGTGTTACCTGATAGATGAGAATAGGAATAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: FLCRTMICGIKV*CYLIDENRNRR Trigger: TCTTCTATTCCTATTCTCATCTATCAGGTAACAGCAGACCTTGATTCCGCAGATCATGGTTCTACAAAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR TCA 72 bp | AGATCATGGGATCTCATGCATCCCAATATTTGTACATaGCCCTCATTTGAAAGTTACCCATCAGTCTTAATG | + |
|
Preference number: 3 (lower is better) Translates to: RSWDLMHPNICT*PSFESYPSVLM Trigger: CATTAAGACTGATGGGTAACTTTCAAATGAGGGTCATGTACAAATATTGGGATGCATGAGATCCCATGATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
||
| 3UTR GCA 72 bp | CTACTACATGTGAGAAATAATGCTCAAGTCAGCTTTTaGTGCCAAGTGAGCTGTCAAGATAGATTTCTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LLHVRNNAQVSF*CQVSCQDRFLK Trigger: CTTAAGAAATCTATCTTGACAGCTCACTTGGCAGCAAAAGCTGACTTGAGCATTATTTCTCACATGTAGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR-3UTR CAA 90 bp | AACGACATCAAGTATACATTACCTATAACAATTGTTCCCAACAAAGAGACTCTGGTACATGACCCTCATTaGAAAGTTACCCATCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: NDIKYTLPITIVPNKETLVHDPH*KVTHQS Trigger: AGACTGATGGGTAACTTTCAAATGAGGGTCATGTAC...CAGAGTCTCTTTGTTGGGAACAATTGTTATAGGTAATGTATACTTGATGTCGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR GCA 72 bp | CTACATGTGAGAAATAATGCTCAAGTCAGCTTTTGCTaGCAAGTGAGCTGTCAAGATAGATTTCTTAAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: LHVRNNAQVSFC*QVSCQDRFLKY Trigger: ATACTTAAGAAATCTATCTTGACAGCTCACTTGGCAGCAAAAGCTGACTTGAGCATTATTTCTCACATGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR-3UTR CAA 90 bp | AACGACATCAAGTATACATTACCTATAACAATTGTTCCCAACAAAGAGACTCTGATTAGCATACGGAGATaGGTGAAACATCTCCATACT | + |
|
Preference number: 3 (lower is better) Translates to: NDIKYTLPITIVPNKETLISIRR*VKHLHT Trigger: AGTATGGAGATGTTTCACCAATCTCCGTATGCTAAT...CAGAGTCTCTTTGTTGGGAACAATTGTTATAGGTAATGTATACTTGATGTCGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| 3UTR TCA 72 bp | TCTCATGCATCCCAATATTTGTACATGACCCTCATTTaGAAGTTACCCATCAGTCTTAATGAAATCTTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SHASQYLYMTLI*KLPISLNEIFQ Trigger: TTGAAAGATTTCATTAAGACTGATGGGTAACTTTCAAATGAGGGTCATGTACAAATATTGGGATGCATGAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307534.8 ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR CCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGAAGCCCCGCCTCCTGTaGCACAGAGGGTGGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLKPRLL*HRGWCE Trigger: TTCACACCACCCTCTGTGCCACAGGAGGCGGGGCTT...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR TCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGAGCTGGGAAAGCGGATaGAGTGCAGGTTCCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLSWESG*SAGSLC Trigger: GCAAAGGGAACCTGCACTTCATCCGCTTTCCCAGCT...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR TCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGAGTCCTCTTCGAATTTaGAAGCCCCGCCTCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLSPLRI*KPRLLW Trigger: CCACAGGAGGCGGGGCTTTCAAATTCGAAGAGGACT...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR CCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAAAGCCCCGCCTCCTGTaGCACAGAGGGTGGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAKPRLL*HRGWCE Trigger: TTCACACCACCCTCTGTGCCACAGGAGGCGGGGCTT...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR TCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGTTCTCGCTGCCCATCTaGATGAACCTGTGCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLFSLPI*MNLCIA Trigger: TGCTATGCACAGGTTCATTCAGATGGGCAGCGAGAA...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR TCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGATTCTGGCTTGCCGTTaGAGCCAACAGAGTCGACAT | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLILACR*SQQSRH Trigger: ATGTCGACTCTGTTGGCTTCAACGGCAAGCCAGAAT...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR GCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGGGCTGTTTCCTCCACTaGTCGTCTCTACTTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLGCFLH*SSLLVI Trigger: GATGACAAGTAGAGACGAGCAGTGGAGGAAACAGCC...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR CCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGTCCCACAGCGTCCTGTaGGGAAGGTACACTTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLSHSVL*GRYTLQ Trigger: TTGTAAAGTGTACCTTCCCCACAGGACGCTGTGGGA...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| 3UTR CAA 72 bp | ATGCATAGGGCTACAGCTTCACCTGAAGACAGTGTTTaGGACCATACCACACTCATGGGAAAGCCTCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: MHRATASPEDSV*DHTTLMGKPPI Trigger: AATTGGAGGCTTTCCCATGAGTGTGGTATGGTCCAAAACACTGTCTTCAGGTGAAGCTGTAGCCCTATGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| CDS-3UTR TCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAAGTCCTCTTCGAATTTaGAAGCCCCGCCTCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAASPLRI*KPRLLW Trigger: CCACAGGAGGCGGGGCTTTCAAATTCGAAGAGGACT...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR TCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGCGAGGTCTTCCTTGCTaGTGGAATCTCGCTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLRGLPC*WNLAFL Trigger: AAGAAAAGCGAGATTCCATCAGCAAGGAAGACCTCG...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR CCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGTTTTTCAGTTCCAGGTaGACGTCTCGGATCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLFFSSR*TSRIPV Trigger: AACTGGGATCCGAGACGTCCACCTGGAACTGAAAAA...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR CCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGCAGCAACATAGGGTATaGGTTATCAAGGCAGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLQQHRV*VIKAVR Trigger: CCGTACTGCCTTGATAACCCATACCCTATGTTGCTG...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR TCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGTGTCATCAGTCATTTTaGACAGTTCCAACAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLCHQSF*TVPTVP Trigger: GGGCACTGTTGGAACTGTTCAAAATGACTGATGACA...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR GCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGTTCTCCACTTCCTCTTaGTCCTCTTCGGCTGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLFSTSS*SSSAVI Trigger: TATTACAGCCGAAGAGGAGCAAGAGGAAGTGGAGAA...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR GCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAAGTGCAGGTTCCCTTTaGGTCCACACATGGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAASAGSL*VHTWSG Trigger: ACCTGACCATGTGTGGACGCAAAGGGAACCTGCACT...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR GCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGAAAATCCATGGCATATaGCAGCAGCTTCATGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLKIHGI*QQLHGD Trigger: GTCTCCATGAAGCTGCTGGCATATGCCATGGATTTT...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR CCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGGTCCATGCCAAACCATaGGAATGTTTGCTTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLVHAKP*ECLLFA Trigger: GGCAAAAAGCAAACATTCCCATGGTTTGGCATGGAC...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR TCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCATTCTCGCTGCCCATCTaGATGAACCTGTGCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAFSLPI*MNLCIA Trigger: TGCTATGCACAGGTTCATTCAGATGGGCAGCGAGAA...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR TCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAATTCTGGCTTGCCGTTaGAGCCAACAGAGTCGACAT | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAILACR*SQQSRH Trigger: ATGTCGACTCTGTTGGCTTCAACGGCAAGCCAGAAT...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR GCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGTCAAATACTTCCGGATaGTCTTCAGGTTCTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLSNTSG*SSGSPL Trigger: AAGTGGAGAACCTGAAGAGCATCCGGAAGTATTTGA...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR GCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAGCTGTCGCCTTTAGCTaGCATTTCCAGAGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAAVAFS*HFQSFF Trigger: GAAGAAGCTCTGGAAATGGCAGCTAAAGGCGACAGC...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342512.3 |
||
| CDS-3UTR TCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGTTAAAATCACCACACTaGTCAGTAAACCCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLLKSPH*SVNPRR Trigger: TCTTCTGGGGTTTACTGATCAGTGTGGTGATTTTAA...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR GCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAGAACAGTTCCAACAGTaGCCCAACGGCTCCAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAEQFQQ*PNGSKI Trigger: TATTTTGGAGCCGTTGGGGCACTGTTGGAACTGTTC...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR CCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCATTTTTCAGTTCCAGGTaGACGTCTCGGATCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAFFSSR*TSRIPV Trigger: AACTGGGATCCGAGACGTCCACCTGGAACTGAAAAA...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR CCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGTTTTATAGTTGTCCTTaGAGTACACGGCTAGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLFYSCP*STRLEC Trigger: GCATTCTAGCCGTGTACTCCAAGGACAACTATAAAA...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| 3UTR CAA 72 bp | TTGGACCATACCACACTCATGGGAAAGCCTCCAATTTaGAAATGTAGAGTAGCAAAAACACAACAGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LDHTTLMGKPPI*KCRVAKTQQTV Trigger: GACTGTCTGTTGTGTTTTTGCTACTCTACATTTCAAAATTGGAGGCTTTCCCATGAGTGTGGTATGGTCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000307534.8 |
||
| CDS-3UTR TCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCATGTCATCAGTCATTTTaGACAGTTCCAACAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAACHQSF*TVPTVP Trigger: GGGCACTGTTGGAACTGTTCAAAATGACTGATGACA...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR TCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAACCCCAGAAGAAAAATaGCCAGCGCTTACATATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAATPEEK*PALTYQ Trigger: CTGATATGTAAGCGCTGGTCATTTTTCTTCTGGGGT...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR GCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCATCCAGTTTATGCAGCTaGAGGTCAGCAATCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAASSLCS*RSAIIL Trigger: CAGAATGATTGCTGACCTGCAGCTGCATAAACTGGA...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR GCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAAAAATCCATGGCATATaGCAGCAGCTTCATGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAKIHGI*QQLHGD Trigger: GTCTCCATGAAGCTGCTGGCATATGCCATGGATTTT...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR CCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGAACTTTGTATTGAGCTaGTCAGCACCTTCATTGATA | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLNFVLS*SAPSLI Trigger: TATCAATGAAGGTGCTGACCAGCTCAATACAAAGTT...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR CCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGGAACAATTAATCTACTaGGAGGCTTTTCCCAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLEQLIY*EAFPNK Trigger: CTTATTGGGAAAAGCCTCCCAGTAGATTAATTGTTC...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR CCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGCAAGACTTGAAGATATaGAAATTAAAGACGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLQDLKI*KLKTVL Trigger: GAGCACCGTCTTTAATTTCCATATCTTCAAGTCTTG...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR TCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCATGCTTAACTTTGTATTaGGCTGGTCAGCACCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAACLTLY*AGQHLH Trigger: ATGAAGGTGCTGACCAGCTCAATACAAAGTTAAGCA...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR GCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCATCAAATACTTCCGGATaGTCTTCAGGTTCTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAASNTSG*SSGSPL Trigger: AAGTGGAGAACCTGAAGAGCATCCGGAAGTATTTGA...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR GCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGAACCATGGGAATGTTTaGTTTTTGCCATTTATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLNHGNV*FLPFIS Trigger: GCTTATAAATGGCAAAAAGCAAACATTCCCATGGTT...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR CCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGTTCATATTCTGTGCATaGATGAGGACATTTAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLFIFCA*MRTFNH Trigger: GTGATTAAATGTCCTCATCCATGCACAGAATATGAA...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR CCA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGAAGGAAGATTCATCATaGAGTAATTGTTCTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RRCSEGRERKIHHGVIVLKEDSS*SNCSVL Trigger: AAGGACAGAACAATTACTCCATGATGAATCTTCCTT...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR TCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCATTAAAATCACCACACTaGTCAGTAAACCCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAALKSPH*SVNPRR Trigger: TCTTCTGGGGTTTACTGATCAGTGTGGTGATTTTAA...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR TCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCATATTCTGTGCATGGATaGGGACATTTAATCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAYSVHG*GHLITD Trigger: GTCTGTGATTAAATGTCCTCATCCATGCACAGAATA...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR CCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCACAATACACAAGATCATaGGATCTCATGCATCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAQYTRS*DLMHPN Trigger: ATTGGGATGCATGAGATCCCATGATCTTGTGTATTG...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR TCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAGGTCAGCACCTTCATTaGTATGAACAATTATGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAGQHLH*YEQLCQ Trigger: TTGACATAATTGTTCATATCAATGAAGGTGCTGACC...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR TCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCACCCAATATTTGTACATaGCCCTCATTTGAAAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAPNICT*PSFESY Trigger: GTAACTTTCAAATGAGGGTCATGTACAAATATTGGG...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR GCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCATCTTGCACAAAGATTTaGTGCCATTCATATTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAASCTKI*CHSYSV Trigger: CACAGAATATGAATGGCAGCAAATCTTTGTGCAAGA...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR GCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAGATCATGGGATCTCATaGATCCCAATATTTGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAADHGIS*IPIFVH Trigger: ATGTACAAATATTGGGATGCATGAGATCCCATGATC...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR CCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAAACTTTGTATTGAGCTaGTCAGCACCTTCATTGATA | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAANFVLS*SAPSLI Trigger: TATCAATGAAGGTGCTGACCAGCTCAATACAAAGTT...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR CCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAGAACAATTAATCTACTaGGAGGCTTTTCCCAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAEQLIY*EAFPNK Trigger: CTTATTGGGAAAAGCCTCCCAGTAGATTAATTGTTC...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR CCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCACAAGACTTGAAGATATaGAAATTAAAGACGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAQDLKI*KLKTVL Trigger: GAGCACCGTCTTTAATTTCCATATCTTCAAGTCTTG...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR CCA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAAAGGAAGATTCATCATaGAGTAATTGTTCTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAKEDSS*SNCSVL Trigger: AAGGACAGAACAATTACTCCATGATGAATCTTCCTT...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS GCA 90 bp | GGAGGCGCTGGGGCGCCGCGTCGCTGCCGCCCACTGGACCCCGGCTaGAGACGTGCGGCGGCTGGACTGGCGGCGGATGGAAGCCGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GGAGAPRRCRPLDPG*RRAAAGLAADGSRC Trigger: ACAACGGCTTCCATCCGCCGCCAGTCCAGCCGCCGCACGTCTGCAGCCGGGGTCCAGTGGGCGGCAGCGACGCGGCGCCCCAGCGCCTCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307534.9 |
||
| CDS GCA 90 bp | TGGGGCGCCGCGTCGCTGCCGCCCACTGGACCCCGGCTGCAGACGTaGGGCGGCTGGACTGGCGGCGGATGGAAGCCGTTGTGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WGAASLPPTGPRLQT*GGWTGGGWKPLCSS Trigger: GCTGCTGCACAACGGCTTCCATCCGCCGCCAGTCCAGCCGCCGCACGTCTGCAGCCGGGGTCCAGTGGGCGGCAGCGACGCGGCGCCCCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307534.9 |
||
| CDS CCA 90 bp | GCGGATGGAAGCCGTTGTGCAGCAGCCCGTTCACAGCGGCGGCGCTaGTGCCCACGGGGGCCCCTGGAGAGTGCGGGACCGAGCGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ADGSRCAAARSQRRR*CPRGPLESAGPSAP Trigger: AGGAGCGCTCGGTCCCGCACTCTCCAGGGGCCCCCGTGGGCACCAGCGCCGCCGCTGTGAACGGGCTGCTGCACAACGGCTTCCATCCGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307534.9 |
||
| CDS CCA 90 bp | GCTGCCGCCCACTGGACCCCGGCTGCAGACGTGCGGCGGCTGGACTaGCGGCGGATGGAAGCCGTTGTGCAGCAGCCCGTTCACAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AAAHWTPAADVRRLD*RRMEAVVQQPVHSG Trigger: GCCGCTGTGAACGGGCTGCTGCACAACGGCTTCCATCCGCCGCCAGTCCAGCCGCCGCACGTCTGCAGCCGGGGTCCAGTGGGCGGCAGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS CCA 90 bp | CCCCAGGCCGCGCGACTTCAAACGCGGCTTCCTCGCCTCCCAGACTaGTCCCCGCCACTGAGCATGCCCAGTCCTGCCCGCCACCGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PQAARLQTRLPRLPD*SPPLSMPSPARHRH Trigger: GTGGCGGTGGCGGGCAGGACTGGGCATGCTCAGTGGCGGGGACCAGTCTGGGAGGCGAGGAAGCCGCGTTTGAAGTCGCGCGGCCTGGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS CCA 90 bp | GATCCTCCCTGCGGCTTCCGATTCAGCAGCCGCAGAGCCGGCGCCTaGGGATGGCGAACCCGGCGCTCCTCCCCTCCTCCTGCCGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: DPPCGFRFSSRRAGA*GWRTRRSSPPPADS Trigger: GGAGTCGGCAGGAGGAGGGGAGGAGCGCCGGGTTCGCCATCCCCAGGCGCCGGCTCTGCGGCTGCTGAATCGGAAGCCGCAGGGAGGATC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS CCA 90 bp | ACTGGACCCCGGCTGCAGACGTGCGGCGGCTGGACTGGCGGCGGATaGAAGCCGTTGTGCAGCAGCCCGTTCACAGCGGCGGCGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TGPRLQTCGGWTGGG*KPLCSSPFTAAALV Trigger: CACCAGCGCCGCCGCTGTGAACGGGCTGCTGCACAACGGCTTCCATCCGCCGCCAGTCCAGCCGCCGCACGTCTGCAGCCGGGGTCCAGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS CCA 90 bp | GCGTCGCTGCCGCCCACTGGACCCCGGCTGCAGACGTGCGGCGGCTaGACTGGCGGCGGATGGAAGCCGTTGTGCAGCAGCCCGTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: ASLPPTGPRLQTCGG*TGGGWKPLCSSPFT Trigger: TGTGAACGGGCTGCTGCACAACGGCTTCCATCCGCCGCCAGTCCAGCCGCCGCACGTCTGCAGCCGGGGTCCAGTGGGCGGCAGCGACGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS TCA 90 bp | GACTTCAAACGCGGCTTCCTCGCCTCCCAGACTGGTCCCCGCCACTaGGCATGCCCAGTCCTGCCCGCCACCGCCACCGACGAGTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: DFKRGFLASQTGPRH*ACPVLPATATDEFQ Trigger: TTGAAACTCGTCGGTGGCGGTGGCGGGCAGGACTGGGCATGCTCAGTGGCGGGGACCAGTCTGGGAGGCGAGGAAGCCGCGTTTGAAGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS GCA 90 bp | CGCTGGAGGTCATTCTCCGGCGTCTTTATTTCCCCGGATCCTCCCTaGGGCTTCCGATTCAGCAGCCGCAGAGCCGGCGCCTGGGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: RWRSFSGVFISPDPP*GFRFSSRRAGAWGW Trigger: CCATCCCCAGGCGCCGGCTCTGCGGCTGCTGAATCGGAAGCCGCAGGGAGGATCCGGGGAAATAAAGACGCCGGAGAATGACCTCCAGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS CCA 90 bp | CCGCCACCGCCACCGACGAGTTTCAACATGGGGAATCAAGTTCTCTaGGCTTGCAGAGAGGAGATGGGCGGGTTGGGCTTTGTATGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: PPPPPTSFNMGNQVL*ACREEMGGLGFVWR Trigger: TCGCCATACAAAGCCCAACCCGCCCATCTCCTCTCTGCAAGCCCAGAGAACTTGATTCCCCATGTTGAAACTCGTCGGTGGCGGTGGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS TCA 90 bp | GGCTTGCAGAGAGGAGATGGGCGGGTTGGGCTTTGTATGGCGATGTaGAAACCAGATGGGTCTGGGAGAGACAGCGAAAGGAGCGAACCG | + |
|
Preference number: 5 (lower is better) Translates to: GLQRGDGRVGLCMAM*KPDGSGRDSERSEP Trigger: CGGTTCGCTCCTTTCGCTGTCTCTCCCAGACCCATCTGGTTTTCACATCGCCATACAAAGCCCAACCCGCCCATCTCCTCTCTGCAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS CCA 90 bp | GTTCTCTGGGCTTGCAGAGAGGAGATGGGCGGGTTGGGCTTTGTATaGCGATGTGAAAACCAGATGGGTCTGGGAGAGACAGCGAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VLWACREEMGGLGFV*RCENQMGLGETAKG Trigger: TCCTTTCGCTGTCTCTCCCAGACCCATCTGGTTTTCACATCGCCATACAAAGCCCAACCCGCCCATCTCCTCTCTGCAAGCCCAGAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS CCA 90 bp | TGGGGAATCAAGTTCTCTGGGCTTGCAGAGAGGAGATGGGCGGGTTaGGCTTTGTATGGCGATGTGAAAACCAGATGGGTCTGGGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: WGIKFSGLAERRWAG*ALYGDVKTRWVWER Trigger: TCTCTCCCAGACCCATCTGGTTTTCACATCGCCATACAAAGCCCAACCCGCCCATCTCCTCTCTGCAAGCCCAGAGAACTTGATTCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS CCA 90 bp | GTTTCAACATGGGGAATCAAGTTCTCTGGGCTTGCAGAGAGGAGATaGGCGGGTTGGGCTTTGTATGGCGATGTGAAAACCAGATGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSTWGIKFSGLAERR*AGWALYGDVKTRWV Trigger: GACCCATCTGGTTTTCACATCGCCATACAAAGCCCAACCCGCCCATCTCCTCTCTGCAAGCCCAGAGAACTTGATTCCCCATGTTGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS TCA 90 bp | AGCTCTTGCAGGGGCAAAGGAAGCCATGTCATTCTGGTAGCACCATaGAGTGTATTCTTAGCTTGGATCTGGGCCAGGAGGAAGCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSCRGKGSHVILVAP*SVFLAWIWARRKQE Trigger: TTCCTGCTTCCTCCTGGCCCAGATCCAAGCTAAGAATACACTTCATGGTGCTACCAGAATGACATGGCTTCCTTTGCCCCTGCAAGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488482.1 |
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| CDS-3UTR CAA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGCGGGCGAGGTCTTCCTaGCTGATGGAATCTCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RRCSEGRERKIHHGVIVLRARSS*LMESRF Trigger: AAAGCGAGATTCCATCAGCAAGGAAGACCTCGCCCG...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
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| CDS-3UTR CAA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCACGGGCGAGGTCTTCCTaGCTGATGGAATCTCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SNNFSKLMHTIGRFGHAARARSS*LMESRF Trigger: AAAGCGAGATTCCATCAGCAAGGAAGACCTCGCCCG...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
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| CDS-3UTR CAA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAAAGTCCTCTTCGAATTaGAAAGCCCCGCCTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAKSSSN*KAPPPV Trigger: CACAGGAGGCGGGGCTTTCAAATTCGAAGAGGACTT...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
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| CDS-3UTR CAA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCACATTCTGGCTTGCCGTaGAAGCCAACAGAGTCGACA | + |
|
Preference number: 5 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAHSGLP*KPTEST Trigger: TGTCGACTCTGTTGGCTTCAACGGCAAGCCAGAATG...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS-3UTR CAA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGGCTTTCAGTTGTCCTTaGGACCAAAAATCCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRCSEGRERKIHHGVIVLAFSCP*DQKSMA Trigger: TGCCATGGATTTTTGGTCCAAAGGACAACTGAAAGC...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
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| CDS-3UTR CAA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAGTTCTCCACTTCCTCTaGCTCCTCTTCGGCTGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAVLHFL*LLFGCN Trigger: ATTACAGCCGAAGAGGAGCAAGAGGAAGTGGAGAAC...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
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| CDS-3UTR CAA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGTTGTCATCAGTCATTTaGAACAGTTCCAACAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRCSEGRERKIHHGVIVLLSSVI*NSSNSA Trigger: GGCACTGTTGGAACTGTTCAAAATGACTGATGACAA...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
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| CDS-3UTR CAA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGACTGCTCGTCTCTACTaGTCATCAGTCATTTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RRCSEGRERKIHHGVIVLTARLY*SSVILN Trigger: GTTCAAAATGACTGATGACAAGTAGAGACGAGCAGT...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
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| CDS-3UTR CAA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGGTACATGACCCTCATTaGAAAGTTACCCATCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RRCSEGRERKIHHGVIVLVHDPH*KVTHQS Trigger: AGACTGATGGGTAACTTTCAAATGAGGGTCATGTAC...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
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| CDS-3UTR CAA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGAAACAGAGCTTTCAGTaGTCCTTTGGACCAAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: RRCSEGRERKIHHGVIVLKQSFQ*SFGPKI Trigger: GATTTTTGGTCCAAAGGACAACTGAAAGCTCTGTTT...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
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| CDS-3UTR CAA 90 bp | AGACGGTGCTCAGAAGGCAGAGAAAGGAAGATTCATCATGGAGTAATTGTTCTGCAAAGAAGTAACCAGTaGAATGAGCTTCAGTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RRCSEGRERKIHHGVIVLQRSNQ*NELQSR Trigger: TCTTGACTGAAGCTCATTCAACTGGTTACTTCTTTG...CAGAACAATTACTCCATGATGAATCTTCCTTTCTCTGCCTTCTGAGCACCGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
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| CDS CCA 90 bp | CCAGCTGTAAACTCGACCTACAAATTTACATCCCACAGCGTCCTGTaGGGAAGGTACACTTTACAAACTACCATTATATATACAAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PAVNSTYKFTSHSVL*GRYTLQTTIIYTSF Trigger: AAAGCTTGTATATATAATGGTAGTTTGTAAAGTGTACCTTCCCCACAGGACGCTGTGGGATGTAAATTTGTAGGTCGAGTTTACAGCTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000322191.10 ENST00000342512.3 ENST00000488482.1 |
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| CDS-3UTR CAA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAACCAGTTTATCAACATaGGTGCTGTCGCCTTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SNNFSKLMHTIGRFGHAATSLST*VLSPLA Trigger: AGCTAAAGGCGACAGCACCAATGTTGATAAACTGGT...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342512.3 |
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| CDS-3UTR CAA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCATGCTACAGCAGATCCTaGAAGGCCAAATCGTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: SNNFSKLMHTIGRFGHAACYSRS*KAKSFI Trigger: TATGAACGATTTGGCCTTCAAGGATCTGCTGTAGCA...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342512.3 |
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| CDS-3UTR CAA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCATCATGTTGCCAAAGCTaGATGCTACAGCAGATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SNNFSKLMHTIGRFGHAASCCQS*MLQQIL Trigger: AAGGATCTGCTGTAGCATCAAGCTTTGGCAACATGA...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342512.3 |
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| CDS-3UTR CAA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAGCTTTCAGTTGTCCTTaGGACCAAAAATCCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAAFSCP*DQKSMA Trigger: TGCCATGGATTTTTGGTCCAAAGGACAACTGAAAGC...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
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| CDS-3UTR CAA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAATACAATTGGTAGGTTaGGCCACGCTGCACCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAIQLVG*ATLHHF Trigger: AAAATGGTGCAGCGTGGCCAAACCTACCAATTGTAT...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
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| CDS-3UTR CAA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAGTGCTTAACTTTGTATaGAGCTGGTCAGCACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAVLNFV*SWSAPS Trigger: TGAAGGTGCTGACCAGCTCAATACAAAGTTAAGCAC...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
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| CDS-3UTR CAA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCATCTTTACTCATCATGTaGCCAAAGCTGGTCCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SNNFSKLMHTIGRFGHAASLLIM*PKLVPV Trigger: TACAGGGACCAGCTTTGGCAACATGATGAGTAAAGA...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322191.10 |
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| CDS-3UTR CAA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCATTGTCATCAGTCATTTaGAACAGTTCCAACAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SNNFSKLMHTIGRFGHAALSSVI*NSSNSA Trigger: GGCACTGTTGGAACTGTTCAAAATGACTGATGACAA...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
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| CDS-3UTR CAA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAGTACATGACCCTCATTaGAAAGTTACCCATCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAVHDPH*KVTHQS Trigger: AGACTGATGGGTAACTTTCAAATGAGGGTCATGTAC...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
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| CDS TCA 90 bp | CCATTTATAAGCTTCATTAAAGACACCCACAAAGAAGTAACCAGTTaGATGAGCTTCAGTCAAGAAAAACCAGCTGTAAACTCGACCTAC | + |
|
Preference number: 5 (lower is better) Translates to: PFISFIKDTHKEVTS*MSFSQEKPAVNSTY Trigger: GTAGGTCGAGTTTACAGCTGGTTTTTCTTGACTGAAGCTCATTCAACTGGTTACTTCTTTGTGGGTGTCTTTAATGAAGCTTATAAATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000322191.10 ENST00000342512.3 ENST00000488482.1 |
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| CDS-3UTR CAA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCATCTTTACTCATCATGTaGCCAAAGCTTGATGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: SNNFSKLMHTIGRFGHAASLLIM*PKLDAT Trigger: TGTAGCATCAAGCTTTGGCAACATGATGAGTAAAGA...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342512.3 |
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| CDS-3UTR CAA 90 bp | TCAAACAACTTTTCAAAGTTAATGCATACAATTGGTAGGTTTGGCCACGCTGCAAAACAGAGCTTTCAGTaGTCCTTTGGACCAAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: SNNFSKLMHTIGRFGHAAKQSFQ*SFGPKI Trigger: GATTTTTGGTCCAAAGGACAACTGAAAGCTCTGTTT...TGCAGCGTGGCCAAACCTACCAATTGTATGCATTAACTTTGAAAAGTTGTTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000322191.10 ENST00000342512.3 |
||
| CDS GCA 72 bp | GGGGCGCCGCGTCGCTGCCGCCCACTGGACCCCGGCTaGAGACGTGCGGCGGCTGGACTGGCGGCGGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: GAPRRCRPLDPG*RRAAAGLAADG Trigger: TCCATCCGCCGCCAGTCCAGCCGCCGCACGTCTGCAGCCGGGGTCCAGTGGGCGGCAGCGACGCGGCGCCCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS GCA 72 bp | CTGGAGAGTGCGGGACCGAGCGCTCCTGCTGCCCGCTaGGGTCGCCCATGCCGGGGGCTGGCGGGGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LESAGPSAPAAR*GRPCRGLAGLC Trigger: GCACAGCCCCGCCAGCCCCCGGCATGGGCGACCGCAGCGGGCAGCAGGAGCGCTCGGTCCCGCACTCTCCAG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307534.9 |
||
| CDS GCA 72 bp | GCGTCGCTGCCGCCCACTGGACCCCGGCTGCAGACGTaGGGCGGCTGGACTGGCGGCGGATGGAAGCCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ASLPPTGPRLQT*GGWTGGGWKPL Trigger: CAACGGCTTCCATCCGCCGCCAGTCCAGCCGCCGCACGTCTGCAGCCGGGGTCCAGTGGGCGGCAGCGACGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.9 |
||
| CDS CCA 72 bp | AGCCGTTGTGCAGCAGCCCGTTCACAGCGGCGGCGCTaGTGCCCACGGGGGCCCCTGGAGAGTGCGGGACCG | + |
|
Preference number: 6 (lower is better) Translates to: SRCAAARSQRRR*CPRGPLESAGP Trigger: CGGTCCCGCACTCTCCAGGGGCCCCCGTGGGCACCAGCGCCGCCGCTGTGAACGGGCTGCTGCACAACGGCT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307534.9 |
||
| CDS GCA 72 bp | TGCGGCGGCTGGACTGGCGGCGGATGGAAGCCGTTGTaGAGCAGCCCGTTCACAGCGGCGGCGCTGGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: CGGWTGGGWKPL*SSPFTAAALVP Trigger: GGGCACCAGCGCCGCCGCTGTGAACGGGCTGCTGCACAACGGCTTCCATCCGCCGCCAGTCCAGCCGCCGCA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.9 |
||
| CDS CCA 72 bp | CCGCCCACTGGACCCCGGCTGCAGACGTGCGGCGGCTaGACTGGCGGCGGATGGAAGCCGTTGTGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PPTGPRLQTCGG*TGGGWKPLCSS Trigger: GCTGCTGCACAACGGCTTCCATCCGCCGCCAGTCCAGCCGCCGCACGTCTGCAGCCGGGGTCCAGTGGGCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.9 |
||
| CDS CCA 72 bp | TGCGGCTTCCGATTCAGCAGCCGCAGAGCCGGCGCCTaGGGATGGCGAACCCGGCGCTCCTCCCCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CGFRFSSRRAGA*GWRTRRSSPPP Trigger: AGGAGGAGGGGAGGAGCGCCGGGTTCGCCATCCCCAGGCGCCGGCTCTGCGGCTGCTGAATCGGAAGCCGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.9 |
||
| CDS CCA 72 bp | CGGCTGCAGACGTGCGGCGGCTGGACTGGCGGCGGATaGAAGCCGTTGTGCAGCAGCCCGTTCACAGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RLQTCGGWTGGG*KPLCSSPFTAA Trigger: CGCCGCTGTGAACGGGCTGCTGCACAACGGCTTCCATCCGCCGCCAGTCCAGCCGCCGCACGTCTGCAGCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.9 |
||
| CDS CAA 72 bp | ACGTGCGGCGGCTGGACTGGCGGCGGATGGAAGCCGTaGTGCAGCAGCCCGTTCACAGCGGCGGCGCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TCGGWTGGGWKP*CSSPFTAAALV Trigger: CACCAGCGCCGCCGCTGTGAACGGGCTGCTGCACAACGGCTTCCATCCGCCGCCAGTCCAGCCGCCGCACGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.9 |
||
| CDS CCA 72 bp | CACTGGACCCCGGCTGCAGACGTGCGGCGGCTGGACTaGCGGCGGATGGAAGCCGTTGTGCAGCAGCCCGTT | + |
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Preference number: 6 (lower is better) Translates to: HWTPAADVRRLD*RRMEAVVQQPV Trigger: AACGGGCTGCTGCACAACGGCTTCCATCCGCCGCCAGTCCAGCCGCCGCACGTCTGCAGCCGGGGTCCAGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS TCA 72 bp | CTCCGCAGCCGGCATTTCTTGGCCGGGGAGTCATGCTaGGGGAGCAGTGGCTGCGGCTGCAGCTCCGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LRSRHFLAGESC*GSSGCGCSSGR Trigger: CCTGCCGGAGCTGCAGCCGCAGCCACTGCTCCCTCAGCATGACTCCCCGGCCAAGAAATGCCGGCTGCGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS GCA 72 bp | TCATTCTCCGGCGTCTTTATTTCCCCGGATCCTCCCTaGGGCTTCCGATTCAGCAGCCGCAGAGCCGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: SFSGVFISPDPP*GFRFSSRRAGA Trigger: GGCGCCGGCTCTGCGGCTGCTGAATCGGAAGCCGCAGGGAGGATCCGGGGAAATAAAGACGCCGGAGAATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS CAA 72 bp | TCTGGGCTTGCAGAGAGGAGATGGGCGGGTTGGGCTTaGTATGGCGATGTGAAAACCAGATGGGTCTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: SGLAERRWAGWA*YGDVKTRWVWE Trigger: CTCCCAGACCCATCTGGTTTTCACATCGCCATACAAAGCCCAACCCGCCCATCTCCTCTCTGCAAGCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS TCA 72 bp | AGAGGAGATGGGCGGGTTGGGCTTTGTATGGCGATGTaGAAACCAGATGGGTCTGGGAGAGACAGCGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: RGDGRVGLCMAM*KPDGSGRDSER Trigger: CCTTTCGCTGTCTCTCCCAGACCCATCTGGTTTTCACATCGCCATACAAAGCCCAACCCGCCCATCTCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS CCA 72 bp | GCGGGTTGGGCTTTGTATGGCGATGTGAAAACCAGATaGGTCTGGGAGAGACAGCGAAAGGAGCGAACCGTT | + |
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Preference number: 6 (lower is better) Translates to: AGWALYGDVKTR*VWERQRKERTV Trigger: AACGGTTCGCTCCTTTCGCTGTCTCTCCCAGACCCATCTGGTTTTCACATCGCCATACAAAGCCCAACCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS CCA 72 bp | GCTTGCAGAGAGGAGATGGGCGGGTTGGGCTTTGTATaGCGATGTGAAAACCAGATGGGTCTGGGAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: ACREEMGGLGFV*RCENQMGLGET Trigger: TGTCTCTCCCAGACCCATCTGGTTTTCACATCGCCATACAAAGCCCAACCCGCCCATCTCCTCTCTGCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS CCA 72 bp | CCACCGACGAGTTTCAACATGGGGAATCAAGTTCTCTaGGCTTGCAGAGAGGAGATGGGCGGGTTGGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: PPTSFNMGNQVL*ACREEMGGLGF Trigger: AAAGCCCAACCCGCCCATCTCCTCTCTGCAAGCCCAGAGAACTTGATTCCCCATGTTGAAACTCGTCGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS CAA 90 bp | ATCAAGTTCTCTGGGCTTGCAGAGAGGAGATGGGCGGGTTGGGCTTaGTATGGCGATGTGAAAACCAGATGGGTCTGGGAGAGACAGCGA | + |
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Preference number: 6 (lower is better) Translates to: IKFSGLAERRWAGWA*YGDVKTRWVWERQR Trigger: TCGCTGTCTCTCCCAGACCCATCTGGTTTTCACATCGCCATACAAAGCCCAACCCGCCCATCTCCTCTCTGCAAGCCCAGAGAACTTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS CAA 90 bp | ATGGGGAATCAAGTTCTCTGGGCTTGCAGAGAGGAGATGGGCGGGTaGGGCTTTGTATGGCGATGTGAAAACCAGATGGGTCTGGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: MGNQVLWACREEMGG*GFVWRCENQMGLGE Trigger: CTCTCCCAGACCCATCTGGTTTTCACATCGCCATACAAAGCCCAACCCGCCCATCTCCTCTCTGCAAGCCCAGAGAACTTGATTCCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS CCA 72 bp | TGGGCTTTGTATGGCGATGTGAAAACCAGATGGGTCTaGGAGAGACAGCGAAAGGAGCGAACCGTTTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: WALYGDVKTRWV*ERQRKERTVSG Trigger: TCCTGAAACGGTTCGCTCCTTTCGCTGTCTCTCCCAGACCCATCTGGTTTTCACATCGCCATACAAAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307534.9 |
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| CDS TCA 72 bp | AGGGGCAAAGGAAGCCATGTCATTCTGGTAGCACCATaGAGTGTATTCTTAGCTTGGATCTGGGCCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RGKGSHVILVAP*SVFLAWIWARR Trigger: CCTCCTGGCCCAGATCCAAGCTAAGAATACACTTCATGGTGCTACCAGAATGACATGGCTTCCTTTGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488482.1 |
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| CDS CAA 72 bp | GTGATGGTGACCAATGTGGCCCGGGCGAGGTCTTCCTaGCTGATGGAATCTCGCTTTTCTTTACTCATCATG | + |
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Preference number: 6 (lower is better) Translates to: VMVTNVARARSS*LMESRFSLLIM Trigger: CATGATGAGTAAAGAAAAGCGAGATTCCATCAGCAAGGAAGACCTCGCCCGGGCCACATTGGTCACCATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000307534.9 ENST00000322191.10 ENST00000342512.3 |
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| CDS GCA 72 bp | TACTTCCGGATGCTCTTCAGGTTCTCCACTTCCTCTTaGTCCTCTTCGGCTGTAATATCCTTCGGCTCGAAA | + |
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Preference number: 6 (lower is better) Translates to: YFRMLFRFSTSS*SSSAVISFGSK Trigger: TTTCGAGCCGAAGGATATTACAGCCGAAGAGGAGCAAGAGGAAGTGGAGAACCTGAAGAGCATCCGGAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307534.9 ENST00000322191.10 ENST00000342512.3 |
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| CDS TCA 72 bp | TGGGATTTTCAAAATAGTAACATTCTGGCTTGCCGTTaGAGCCAACAGAGTCGACATAAAGCAGGCCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: WDFQNSNILACR*SQQSRHKAGPE Trigger: TTCAGGGCCTGCTTTATGTCGACTCTGTTGGCTTCAACGGCAAGCCAGAATGTTACTATTTTGAAAATCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000307534.9 ENST00000322191.10 ENST00000342512.3 ENST00000461829.1 |
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| CDS CCA 72 bp | ACCTTTTACTATAAACTGGTCATCAAGAAAGAGGTCTaGGTTCAAGCACAAGCAGAAACATGTTTACCTGGT | + |
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Preference number: 6 (lower is better) Translates to: TFYYKLVIKKEV*VQAQAETCLPG Trigger: ACCAGGTAAACATGTTTCTGCTTGTGCTTGAACCCAGACCTCTTTCTTGATGACCAGTTTATAGTAAAAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461829.1 |
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