RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PAN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000152520

Ensembl transcript IDs: ENST00000380958.8, ENST00000399613.1, ENST00000483842.1, ENST00000503791.5

Found 345 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCGTAATGTTATTCAGGGCAACCCATCCCAAAAAGAGCAAATTCTaGAACCCTCAATGGCAAAAACGCTGCCCAGCATTGCTTCCCAAA +
Preference number: 1 (lower is better)
Translates to: SVMLFRATHPKKSKF*NPQWQKRCPALLPK
Trigger: TTTGGGAAGCAATGCTGGGCAGCGTTTTTGCCATTGAGGGTTGCAGAATTTGCTCTTTTTGGGATGGGTTGCCCTGAATAACATTACGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR TCA 90 bp TGGGTAAGTGAAACATTCTTCCTTTCAAGTAACAGTGTACCTGACTaGAGTGCAAGCAGCTTTGCTCATCTCCTGTTCGTTTCCCAAATG +
Preference number: 1 (lower is better)
Translates to: WVSETFFLSSNSVPD*SASSFAHLLFVSQM
Trigger: CATTTGGGAAACGAACAGGAGATGAGCAAAGCTGCTTGCACTTCAGTCAGGTACACTGTTACTTGAAAGGAAGAATGTTTCACTTACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR TCA 90 bp CAGAGTGAGTTATTATCAAAAGTACTATTACTTTGGGCTAAGCAGTaGCTGCAAAGGCACAGCAGATCGTTATCCCTCCAAATTCAGGCT +
Preference number: 1 (lower is better)
Translates to: QSELLSKVLLLWAKQ*LQRHSRSLSLQIQA
Trigger: AGCCTGAATTTGGAGGGATAACGATCTGCTGTGCCTTTGCAGTCACTGCTTAGCCCAAAGTAATAGTACTTTTGATAATAACTCACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR TCA 90 bp GTGCAAGCAGCTTTGCTCATCTCCTGTTCGTTTCCCAAATGTGAATaGGATGATGAAAAGTTCAGCTGTAGTGCAATTTGCTATTGGTTA +
Preference number: 1 (lower is better)
Translates to: VQAALLISCSFPKCE*DDEKFSCSAICYWL
Trigger: TAACCAATAGCAAATTGCACTACAGCTGAACTTTTCATCATCTCATTCACATTTGGGAAACGAACAGGAGATGAGCAAAGCTGCTTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR CCA 90 bp ATAAATTCTTCACAGATAACAGCCTCCAATGGCAGCCATAGCTCTTaGGTAAGTGAAACATTCTTCCTTTCAAGTAACAGTGTACCTGAC +
Preference number: 1 (lower is better)
Translates to: INSSQITASNGSHSS*VSETFFLSSNSVPD
Trigger: GTCAGGTACACTGTTACTTGAAAGGAAGAATGTTTCACTTACCCAAGAGCTATGGCTGCCATTGGAGGCTGTTATCTGTGAAGAATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR TCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTAACAGTGTACCTGACTaGAGTGCAAGCAGCTTTGCT +
Preference number: 2 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLNSVPD*SASSFA
Trigger: AGCAAAGCTGCTTGCACTTCAGTCAGGTACACTGTT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR TCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTACATCAGAAAGCTCTTaGTACCAGACCACTGCTGAG +
Preference number: 2 (lower is better)
Translates to: AGLYRMRNSSPILTPALFTSESS*YQTTAE
Trigger: CTCAGCAGTGGTCTGGTATCAAGAGCTTTCTGATGT...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR TCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTTCTTCAGTTGCATGGTaGGCACCCAGTGCTAGTAAA +
Preference number: 2 (lower is better)
Translates to: AGLYRMRNSSPILTPALFSSVAW*APSASK
Trigger: TTTACTAGCACTGGGTGCTCACCATGCAACTGAAGA...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR TCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTCTTCAGTTGCATGGTaGGCACCCAGTGCTAGTAAA +
Preference number: 2 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLSSVAW*APSASK
Trigger: TTTACTAGCACTGGGTGCTCACCATGCAACTGAAGA...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR GCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTAACGCTGCCCAGCATTaGTTCCCAAAAATGTCCTTG +
Preference number: 2 (lower is better)
Translates to: AGLYRMRNSSPILTPALFNAAQH*FPKMSL
Trigger: CAAGGACATTTTTGGGAAGCAATGCTGGGCAGCGTT...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR TCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACAACAGTGTACCTGACTaGAGTGCAAGCAGCTTTGCT +
Preference number: 2 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYNSVPD*SASSFA
Trigger: AGCAAAGCTGCTTGCACTTCAGTCAGGTACACTGTT...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR GCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGGGGCTAAGCAGTGACTaGAAAGGCACAGCAGATCGT +
Preference number: 2 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKGLSSD*KGTADR
Trigger: ACGATCTGCTGTGCCTTTGCAGTCACTGCTTAGCCC...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR CCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTGGCAGCCATAGCTCTTaGGTAAGTGAAACATTCTTC +
Preference number: 2 (lower is better)
Translates to: AGLYRMRNSSPILTPALFGSHSS*VSETFF
Trigger: GAAGAATGTTTCACTTACCCAAGAGCTATGGCTGCC...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR GCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCAACGCTGCCCAGCATTaGTTCCCAAAAATGTCCTTG +
Preference number: 2 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSNAAQH*FPKMSL
Trigger: CAAGGACATTTTTGGGAAGCAATGCTGGGCAGCGTT...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR GCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCCAATGGCAAAAACGCTaGCCAGCATTGCTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSQWQKR*PALLPK
Trigger: TTTGGGAAGCAATGCTGGGCAGCGTTTTTGCCATTG...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR GCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTGGCATACAGAGAGCTTaGATACGATACTCTTACAAG +
Preference number: 2 (lower is better)
Translates to: AGLYRMRNSSPILTPALFGIQRA*IRYSYK
Trigger: CTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCC...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR CCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACGGCAGCCATAGCTCTTaGGTAAGTGAAACATTCTTC +
Preference number: 2 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYGSHSS*VSETFF
Trigger: GAAGAATGTTTCACTTACCCAAGAGCTATGGCTGCC...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR CCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCATTCTGCAACCCTCAATaGCAAAAACGCTGCCCAGCA +
Preference number: 2 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAFCNPQ*QKRCPA
Trigger: TGCTGGGCAGCGTTTTTGCCATTGAGGGTTGCAGAA...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR CAA 90 bp AAGAGCAAATTCTGCAACCCTCAATGGCAAAAACGCTGCCCAGCATaGCTTCCCAAAAATGTCCTTGCAAAGTTTCCCATTATAAGTATA +
Preference number: 2 (lower is better)
Translates to: KSKFCNPQWQKRCPA*LPKNVLAKFPIISI
Trigger: TATACTTATAATGGGAAACTTTGCAAGGACATTTTTGGGAAGCAATGCTGGGCAGCGTTTTTGCCATTGAGGGTTGCAGAATTTGCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR TCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCCTTGGAAGTCTGTCCTaGCCTTTTGAGTTTCCACAT +
Preference number: 2 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSLGSLS*PFEFPH
Trigger: ATGTGGAAACTCAAAAGGTCAGGACAGACTTCCAAG...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR GCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGCAATGGCAAAAACGCTaGCCAGCATTGCTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKQWQKR*PALLPK
Trigger: TTTGGGAAGCAATGCTGGGCAGCGTTTTTGCCATTG...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR GCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTTCAGGTGAAGAGAGGTaGTTTTTCTTGATGCAAATC +
Preference number: 2 (lower is better)
Translates to: AGLYRMRNSSPILTPALFSGEER*FFLMQI
Trigger: GATTTGCATCAAGAAAAAGCACCTCTCTTCACCTGA...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR TCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTACAAAAATCTCAATTTaGACTAACAGTGGGTGGCAT +
Preference number: 2 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLTKISI*TNSGWH
Trigger: ATGCCACCCACTGTTAGTTCAAATTGAGATTTTTGT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR TCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCAGAGGTGCTTTTTCTTaGTGCAAATCTCAAGGCAGA +
Preference number: 2 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSRGAFS*CKSQGR
Trigger: TCTGCCTTGAGATTTGCATCAAGAAAAAGCACCTCT...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR GCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGAAGTGCAAGCAGCTTTaGTCATCTCCTGTTCGTTTC +
Preference number: 2 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKKCKQL*SSPVRF
Trigger: GAAACGAACAGGAGATGAGCAAAGCTGCTTGCACTT...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR GCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTGGAAAGAGCTATACATaGTCCTTCAGTTACTGTTTA +
Preference number: 2 (lower is better)
Translates to: AGLYRMRNSSPILTPALFGKSYT*SFSYCL
Trigger: TAAACAGTAACTGAAGGAGCATGTATAGCTCTTTCC...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR TCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCTTACTAGAAATTCCATaGATACCCAAGTTTGGCGAC +
Preference number: 2 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSLLEIP*IPKFGD
Trigger: GTCGCCAAACTTGGGTATTCATGGAATTTCTAGTAA...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR GCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTAGCTGTAGTGCAATTTaGTATTGGTTAAGGTCTTTA +
Preference number: 2 (lower is better)
Translates to: AGLYRMRNSSPILTPALFSCSAI*YWLRSL
Trigger: TAAAGACCTTAACCAATAGCAAATTGCACTACAGCT...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR GCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCTCAGGTGAAGAGAGGTaGTTTTTCTTGATGCAAATC +
Preference number: 2 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSSGEER*FFLMQI
Trigger: GATTTGCATCAAGAAAAAGCACCTCTCTTCACCTGA...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR GCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACTCCCAAAAATGTCCTTaGAAAGTTTCCCATTATAAG +
Preference number: 2 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYSQKCP*KVSHYK
Trigger: CTTATAATGGGAAACTTTGCAAGGACATTTTTGGGA...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR CCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCAGTGCAATTTGCTATTaGTTAAGGTCTTTAGCCATG +
Preference number: 2 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSSAICY*LRSLAM
Trigger: CATGGCTAAAGACCTTAACCAATAGCAAATTGCACT...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR TCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAACAAAAATCTCAATTTaGACTAACAGTGGGTGGCAT +
Preference number: 2 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIATKISI*TNSGWH
Trigger: ATGCCACCCACTGTTAGTTCAAATTGAGATTTTTGT...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR GCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCAAAAAGAGCAAATTCTaGAACCCTCAATGGCAAAAA +
Preference number: 2 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSKKSKF*NPQWQK
Trigger: TTTTTGCCATTGAGGGTTGCAGAATTTGCTCTTTTT...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR CCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAAGTGCAATTTGCTATTaGTTAAGGTCTTTAGCCATG +
Preference number: 2 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIASAICY*LRSLAM
Trigger: CATGGCTAAAGACCTTAACCAATAGCAAATTGCACT...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR GCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAAGCTGTAGTGCAATTTaGTATTGGTTAAGGTCTTTA +
Preference number: 2 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIASCSAI*YWLRSL
Trigger: TAAAGACCTTAACCAATAGCAAATTGCACTACAGCT...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR GCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCATCCCAAAAATGTCCTTaGAAAGTTTCCCATTATAAG +
Preference number: 2 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIASQKCP*KVSHYK
Trigger: CTTATAATGGGAAACTTTGCAAGGACATTTTTGGGA...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR GCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGAAAAAGAGCAAATTCTaGAACCCTCAATGGCAAAAA +
Preference number: 2 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKKKSKF*NPQWQK
Trigger: TTTTTGCCATTGAGGGTTGCAGAATTTGCTCTTTTT...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR GCA 72 bp TTATTCAGGGCAACCCATCCCAAAAAGAGCAAATTCTaGAACCCTCAATGGCAAAAACGCTGCCCAGCATTG +
Preference number: 3 (lower is better)
Translates to: LFRATHPKKSKF*NPQWQKRCPAL
Trigger: CAATGCTGGGCAGCGTTTTTGCCATTGAGGGTTGCAGAATTTGCTCTTTTTGGGATGGGTTGCCCTGAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR CAA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTCCACATTTTCTTCAGTaGCATGGTGAGCACCCAGTG +
Preference number: 3 (lower is better)
Translates to: AGLYRMRNSSPILTPALFPHFLQ*HGEHPV
Trigger: CACTGGGTGCTCACCATGCAACTGAAGAAAATGTGG...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR GCA 72 bp TCTGCAACCCTCAATGGCAAAAACGCTGCCCAGCATTaGTTCCCAAAAATGTCCTTGCAAAGTTTCCCATTA +
Preference number: 3 (lower is better)
Translates to: SATLNGKNAAQH*FPKMSLQSFPL
Trigger: TAATGGGAAACTTTGCAAGGACATTTTTGGGAAGCAATGCTGGGCAGCGTTTTTGCCATTGAGGGTTGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR CAA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTGAAGTGCAAGCAGCTTaGCTCATCTCCTGTTCGTTT +
Preference number: 3 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLEVQAA*LISCSF
Trigger: AAACGAACAGGAGATGAGCAAAGCTGCTTGCACTTC...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR CAA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTCATGAATACCCAAGTTaGGCGACAACTGCATGTCCA +
Preference number: 3 (lower is better)
Translates to: AGLYRMRNSSPILTPALFHEYPS*ATTACP
Trigger: TGGACATGCAGTTGTCGCCAAACTTGGGTATTCATG...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR TCA 72 bp GAAACATTCTTCCTTTCAAGTAACAGTGTACCTGACTaGAGTGCAAGCAGCTTTGCTCATCTCCTGTTCGTT +
Preference number: 3 (lower is better)
Translates to: ETFFLSSNSVPD*SASSFAHLLFV
Trigger: AACGAACAGGAGATGAGCAAAGCTGCTTGCACTTCAGTCAGGTACACTGTTACTTGAAAGGAAGAATGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR CCA 72 bp TCACAGATAACAGCCTCCAATGGCAGCCATAGCTCTTaGGTAAGTGAAACATTCTTCCTTTCAAGTAACAGT +
Preference number: 3 (lower is better)
Translates to: SQITASNGSHSS*VSETFFLSSNS
Trigger: ACTGTTACTTGAAAGGAAGAATGTTTCACTTACCCAAGAGCTATGGCTGCCATTGGAGGCTGTTATCTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR CAA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCAAACGCTGCCCAGCATaGCTTCCCAAAAATGTCCTT +
Preference number: 3 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSKRCPA*LPKNVL
Trigger: AAGGACATTTTTGGGAAGCAATGCTGGGCAGCGTTT...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR CAA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTGTCTGTCCTGACCTTTaGAGTTTCCACATTTTCTTC +
Preference number: 3 (lower is better)
Translates to: AGLYRMRNSSPILTPALFVCPDL*SFHIFF
Trigger: GAAGAAAATGTGGAAACTCAAAAGGTCAGGACAGAC...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR TCA 72 bp GCTTTGCTCATCTCCTGTTCGTTTCCCAAATGTGAATaGGATGATGAAAAGTTCAGCTGTAGTGCAATTTGC +
Preference number: 3 (lower is better)
Translates to: ALLISCSFPKCE*DDEKFSCSAIC
Trigger: GCAAATTGCACTACAGCTGAACTTTTCATCATCTCATTCACATTTGGGAAACGAACAGGAGATGAGCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR CAA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCTGGCATACAGAGAGCTaGCATACGATACTCTTACAA +
Preference number: 3 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSWHTES*HTILLQ
Trigger: TTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCA...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR TCA 72 bp TTATTATCAAAAGTACTATTACTTTGGGCTAAGCAGTaGCTGCAAAGGCACAGCAGATCGTTATCCCTCCAA +
Preference number: 3 (lower is better)
Translates to: LLSKVLLLWAKQ*LQRHSRSLSLQ
Trigger: TTGGAGGGATAACGATCTGCTGTGCCTTTGCAGTCACTGCTTAGCCCAAAGTAATAGTACTTTTGATAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR GCA 72 bp TGCAAACATTCTTGGATTTGTGATGTAAACTTGCCTTaGACAGGGAAGTTTGCTGGTCTATACAGAATGAGA +
Preference number: 3 (lower is better)
Translates to: CKHSWICDVNLP*TGKFAGLYRMR
Trigger: TCTCATTCTGTATAGACCAGCAAACTTCCCTGTGCAAGGCAAGTTTACATCACAAATCCAAGAATGTTTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR-3UTR CAA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCATGGCATACAGAGAGCTaGCATACGATACTCTTACAA +
Preference number: 3 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAWHTES*HTILLQ
Trigger: TTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCA...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR GCA 72 bp ATTATTAAAATTGAAGACAGTAACATCAGTTGCAAGTaGTTGGAAGTCTGTCCTGACCTTTTGAGTTTCCAC +
Preference number: 3 (lower is better)
Translates to: IIKIEDSNISCK*LEVCPDLLSFH
Trigger: GTGGAAACTCAAAAGGTCAGGACAGACTTCCAAGCACTTGCAACTGATGTTACTGTCTTCAATTTTAATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR TCA 72 bp AAACAGGTACAAAATATTGAAATGACCAACGTTACATaGTTTCAAGGGTTGTCCTTTCTGTGCTTTTATCTG +
Preference number: 3 (lower is better)
Translates to: KQVQNIEMTNVT*FQGLSFLCFYL
Trigger: CAGATAAAAGCACAGAAAGGACAACCCTTGAAATCATGTAACGTTGGTCATTTCAATATTTTGTACCTGTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACCGAGTCCCCCGCTACTaGCTCCTCCGCCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYRVPRY*LLRRLR
Trigger: CCGCAGCCGGCGGAGGAGGCAGTAGCGGGGGACTCG...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTCCAGGGGGACGCTGTTaGTATGGAGGCCGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLPGGRC*YGGRGP
Trigger: CGGGCCTCGGCCTCCATAGCAACAGCGTCCCCCTGG...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380958.8
CDS-3UTR CCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTGGGACGCTGTTGCTATaGAGGCCGAGGCCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLGTLLL*RPRPGA
Trigger: TGCCCCGGGCCTCGGCCTCCATAGCAACAGCGTCCC...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380958.8
CDS-3UTR GCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACGGAAGACGCTGCCGGTaGCGGATAAAAGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYGRRCR*RIKAWA
Trigger: CGCCCAGGCTTTTATCCGGCACCGGCAGCGTCTTCC...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380958.8
CDS-3UTR GCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGAAAGCCGGCCACGGGTaGACCAGCCAGAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKKAGHG*TSQSQG
Trigger: CCCCTGGCTCTGGCTGGTGCACCCGTGGCCGGCTTT...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380958.8
CDS-3UTR CCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACATGCTGCCTGGGCAATaGTCCCTCGTGCTGACCCCA +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYMLPGQ*SLVLTP
Trigger: TGGGGTCAGCACGAGGGACCATTGCCCAGGCAGCAT...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTACGGTCTCCAGTCTCTaGCCAAGTGGGATCCTTCTG +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLTVSSL*PSGILL
Trigger: CAGAAGGATCCCACTTGGTCAGAGACTGGAGACCGT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCATGCTGCCTGGGCAATaGTCCCTCGTGCTGACCCCA +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSMLPGQ*SLVLTP
Trigger: TGGGGTCAGCACGAGGGACCATTGCCCAGGCAGCAT...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTGTAATCTTGGGGGAATaGAGAGGGGAAGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFVILGE*RGEDPA
Trigger: TGCTGGGTCTTCCCCTCTTCATTCCCCCAAGATTAC...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTAATAATCCAGCATGCTaGCTGGGCAATGGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFNNPAC*LGNGPS
Trigger: CGAGGGACCATTGCCCAGGCAGCATGCTGGATTATT...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACAATAATCCAGCATGCTaGCTGGGCAATGGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYNNPAC*LGNGPS
Trigger: CGAGGGACCATTGCCCAGGCAGCATGCTGGATTATT...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTCAGTCTCTGACCAAGTaGGATCCTTCTGAAACTCCG +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFQSLTK*DPSETP
Trigger: CGGAGTTTCAGAAGGATCCCACTTGGTCAGAGACTG...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTCAGTCTCTGACCAAGTaGGATCCTTCTGAAACTCCG +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLQSLTK*DPSETP
Trigger: CGGAGTTTCAGAAGGATCCCACTTGGTCAGAGACTG...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR CAA 72 bp TTCTGCAACCCTCAATGGCAAAAACGCTGCCCAGCATaGCTTCCCAAAAATGTCCTTGCAAAGTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: FCNPQWQKRCPA*LPKNVLAKFPI
Trigger: AATGGGAAACTTTGCAAGGACATTTTTGGGAAGCAATGCTGGGCAGCGTTTTTGCCATTGAGGGTTGCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCGTAATCTTGGGGGAATaGAGAGGGGAAGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSVILGE*RGEDPA
Trigger: TGCTGGGTCTTCCCCTCTTCATTCCCCCAAGATTAC...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACGGAGTTCATCAGCCATaGAGAAGGAAGGTGCGTTTG +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYGVHQP*RRKVRL
Trigger: CAAACGCACCTTCCTTCTTCATGGCTGATGAACTCC...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTGCCAAACCTGCTGTATaGATGGTACGCAATGCAGAA +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFAKPAV*MVRNAE
Trigger: TTCTGCATTGCGTACCATTCATACAGCAGGTTTGGC...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGACGGTCTCCAGTCTCTaGCCAAGTGGGATCCTTCTG +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKTVSSL*PSGILL
Trigger: CAGAAGGATCCCACTTGGTCAGAGACTGGAGACCGT...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGAGGAAAGGAAGACGCTaGCGGTGCCGGATAAAAGCC +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKRKGRR*RCRIKA
Trigger: GGCTTTTATCCGGCACCGGCAGCGTCTTCCTTTCCT...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380958.8
CDS-3UTR GCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGGGCAATAATCCAGCATaGTGCCTGGGCAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKGNNPA*CLGNGP
Trigger: GGGACCATTGCCCAGGCAGCATGCTGGATTATTGCC...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTAACGCTGCCCAGCATTaGTTCCCAAAAATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLNAAQH*FPKMSL
Trigger: CAAGGACATTTTTGGGAAGCAATGCTGGGCAGCGTT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCGGGCTAAGCAGTGACTaGAAAGGCACAGCAGATCGT +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSGLSSD*KGTADR
Trigger: ACGATCTGCTGTGCCTTTGCAGTCACTGCTTAGCCC...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTAGGGCTTCCCATGGATaGGTGAGAGAAAACTTGAGA +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLRASHG*VRENLR
Trigger: TCTCAAGTTTTCTCTCACCCATCCATGGGAAGCCCT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTATTTCTGTATCCGGTTaGGAGGTGGCAGTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLISVSG*EVAVVL
Trigger: TAGAACCACTGCCACCTCCCAACCGGATACAGAAAT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTATTTCTGTATCCGGTTaGGAGGTGGCAGTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFISVSG*EVAVVL
Trigger: TAGAACCACTGCCACCTCCCAACCGGATACAGAAAT...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTCTGCTTGCTGGTACTaGGCCATTAATGCCAATGGA +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLSACWY*AINANG
Trigger: TCCATTGGCATTAATGGCCCAGTACCAGCAAGCAGA...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTATCAGATCTGCTTGCTaGTACTGGGCCATTAATGCC +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFIRSAC*YWAINA
Trigger: GGCATTAATGGCCCAGTACCAGCAAGCAGATCTGAT...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGCTTGGCTTTCGTCTCTaGGAGATGTTGAGGGCACCA +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKLGFRL*EMLRAP
Trigger: TGGTGCCCTCAACATCTCTCAGAGACGAAAGCCAAG...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380958.8
CDS-3UTR TCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACGAAGGCAGACATATTTaGCTGGGACACGTTACTCAG +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYEGRHI*LGHVTQ
Trigger: CTGAGTAACGTGTCCCAGTCAAATATGTCTGCCTTC...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCGGAGTTCATCAGCCATaGAGAAGGAAGGTGCGTTTG +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSGVHQP*RRKVRL
Trigger: CAAACGCACCTTCCTTCTTCATGGCTGATGAACTCC...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTCACCAATCATGGGCATaGTGTCATTTACACTTCGCA +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFHQSWA*CHLHFA
Trigger: TGCGAAGTGTAAATGACATCATGCCCATGATTGGTG...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTACTCCGGCCTCTCATTaGTTGTTCCCAATTTTGCTA +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLTPASH*LFPILL
Trigger: TAGCAAAATTGGGAACAATCAATGAGAGGCCGGAGT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACTCTTCAGTTGCATGGTaGGCACCCAGTGCTAGTAAA +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYSSVAW*APSASK
Trigger: TTTACTAGCACTGGGTGCTCACCATGCAACTGAAGA...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTAGGTTAACTAGGGGCTaGAGCAAACTAGCATTTAGG +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLRLTRG*SKLAFR
Trigger: CCTAAATGCTAGTTTGCTTCAGCCCCTAGTTAACCT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAGGTGTCTTTCGTCTCTaGGAGATGTTGAGGGCACCA +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAGVFRL*EMLRAP
Trigger: TGGTGCCCTCAACATCTCTCAGAGACGAAAGACACC...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399613.1
CDS-3UTR GCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTAGGCACCATGTAACTTaGTGGATTTGGAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLRHHVT*WIWSVT
Trigger: AGTCACACTCCAAATCCAGCAAGTTACATGGTGCCT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTGAAGGAAGGTGCGTTTaGTTTCGGTTGCATATAAGC +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFEGRCV*FRLHIS
Trigger: GCTTATATGCAACCGAAAGCAAACGCACCTTCCTTC...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTCGACATGCCAAACCTaGTGTATGAATGGTACGCAA +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLSTCQT*CMNGTQ
Trigger: TTGCGTACCATTCATACAGCAGGTTTGGCATGTCGA...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACCAATGGCAAAAACGCTaGCCAGCATTGCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYQWQKR*PALLPK
Trigger: TTTGGGAAGCAATGCTGGGCAGCGTTTTTGCCATTG...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAGGGCTAAGCAGTGACTaGAAAGGCACAGCAGATCGT +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAGLSSD*KGTADR
Trigger: ACGATCTGCTGTGCCTTTGCAGTCACTGCTTAGCCC...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACCACATTTTCTTCAGTTaGATGGTGAGCACCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYHIFFS*MVSTQC
Trigger: GCACTGGGTGCTCACCATGCAACTGAAGAAAATGTG...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTGATGTAAACTTGCCTTaGACAGGGAAGTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLDVNLP*TGKFAG
Trigger: ACCAGCAAACTTCCCTGTGCAAGGCAAGTTTACATC...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTCCTCCGAAGGCAATATaGCAGATCATCTTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFPPKAI*QIIFAV
Trigger: AACAGCAAAGATGATCTGCCATATTGCCTTCGGAGG...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTGGCAGCCATAGCTCTTaGGTAAGTGAAACATTCTTC +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLGSHSS*VSETFF
Trigger: GAAGAATGTTTCACTTACCCAAGAGCTATGGCTGCC...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCTTCTGCAACCCTCAATaGCAAAAACGCTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSFCNPQ*QKRCPA
Trigger: TGCTGGGCAGCGTTTTTGCCATTGAGGGTTGCAGAA...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTTCCACCAAACCATATTaGTGGGTACTCCTGATTTAC +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFSTKPY*WVLLIY
Trigger: GTAAATCAGGAGTACCCATCAATATGGTTTGGTGGA...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380958.8
CDS-3UTR TCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGGCTGGATTTGGAGTGTaGCTTCTTCTTCTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKAGFGV*LLLLGA
Trigger: TGCTCCCAGAAGAAGAAGTCACACTCCAAATCCAGC...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTCCAGAAGACGGAGTCTaGGAAACAGGATTATTAACA +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLPEDGV*ETGLLT
Trigger: TGTTAATAATCCTGTTTCTCAGACTCCGTCTTCTGG...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCGGTCAGAGGAATAGTTaGTTGTCACCAGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSGQRNS*LSPVPW
Trigger: CCATGGAACTGGTGACAATCAACTATTCCTCTGACC...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTAACAGTCTTCCATTTTaGACCTCCTTTGCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLNSLPF*TSFARS
Trigger: AGACCTTGCAAAGGAGGTTCAAAATGGAAGACTGTT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACACTCCGGCCTCTCATTaGTTGTTCCCAATTTTGCTA +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYTPASH*LFPILL
Trigger: TAGCAAAATTGGGAACAATCAATGAGAGGCCGGAGT...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTAAGAAATTATATGACTaGGGTCAATCCAGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLKKLYD*GQSREH
Trigger: GTGCTCCCTGGATTGACCTCAGTCATATAATTTCTT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCAACAGTGTACCTGACTaGAGTGCAAGCAGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSNSVPD*SASSFA
Trigger: AGCAAAGCTGCTTGCACTTCAGTCAGGTACACTGTT...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCACATCAGAAAGCTCTTaGTACCAGACCACTGCTGAG +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSTSESS*YQTTAE
Trigger: CTCAGCAGTGGTCTGGTATCAAGAGCTTTCTGATGT...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTACACCTAGGCAGAACTaGGAGTTCTTTGAAAACCAT +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLTPRQN*EFFENH
Trigger: ATGGTTTTCAAAGAACTCTCAGTTCTGCCTAGGTGT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTAGGAATAAACTCGCTTaGAGTAGGATTTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLRNKLA*SRIWCL
Trigger: CAGACACCAAATCCTACTGCAAGCGAGTTTATTCCT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380958.8
CDS-3UTR GCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTCATTCCAGTCAAAGGTaGTGGAGTTGTGTCTGTATA +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLHSSQR*WSCVCI
Trigger: TATACAGACACAACTCCAGCACCTTTGACTGGAATG...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTCATTCCAGTCAAAGGTaGTGGAGTTGTGTCTGTATA +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFHSSQR*WSCVCI
Trigger: TATACAGACACAACTCCAGCACCTTTGACTGGAATG...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTAGCATGGAAATCATATaGAAACACAAGAGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLSMEII*KHKRGL
Trigger: GAGCCCTCTCTTGTGTTTGCATATGATTTCCATGCT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACTTCCTGCCAAAGAGTTaGAAGCCAAAGCCAACACAA +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYFLPKS*KPKPTQ
Trigger: TTGTGTTGGCTTTGGCTTGCAACTCTTTGGCAGGAA...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACAAGTGCAAGCAGCTTTaGTCATCTCCTGTTCGTTTC +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYKCKQL*SSPVRF
Trigger: GAAACGAACAGGAGATGAGCAAAGCTGCTTGCACTT...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTGGCATACAGAGAGCTTaGATACGATACTCTTACAAG +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLGIQRA*IRYSYK
Trigger: CTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCC...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTTTGCACAGGGAAGTTTaGTGGTCTATACAGAATGAG +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFLHREV*WSIQNE
Trigger: CTCATTCTGTATAGACCAGCAAACTTCCCTGTGCAA...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCGCAGACATATTTGACTaGGACACGTTACTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSADIFD*DTLLSL
Trigger: CAGGCTGAGTAACGTGTCCCAGTCAAATATGTCTGC...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTCACCATGTAACTTGCTaGATTTGGAGTGTGACTTCT +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFHHVTC*IWSVTS
Trigger: AGAAGTCACACTCCAAATCCAGCAAGTTACATGGTG...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTCACCATGTAACTTGCTaGATTTGGAGTGTGACTTCT +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLHHVTC*IWSVTS
Trigger: AGAAGTCACACTCCAAATCCAGCAAGTTACATGGTG...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTCTCTGTAGGAACTGCTaGCATATCTGCTTGATCAAT +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLLCRNC*HICLIN
Trigger: ATTGATCAAGCAGATATGCCAGCAGTTCCTACAGAG...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCATCAGATCTGCTTGCTaGTACTGGGCCATTAATGCC +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSIRSAC*YWAINA
Trigger: GGCATTAATGGCCCAGTACCAGCAAGCAGATCTGAT...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGTTCTGCAACCCTCAATaGCAAAAACGCTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKFCNPQ*QKRCPA
Trigger: TGCTGGGCAGCGTTTTTGCCATTGAGGGTTGCAGAA...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTATGAATACCCAAGTTTaGCGACAACTGCATGTCCAA +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLMNTQV*RQLHVQ
Trigger: TTGGACATGCAGTTGTCGCCAAACTTGGGTATTCAT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTAATGGAATTACACTATaGAAAACAGGGCTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLNGITL*KTGLPQ
Trigger: TTGGGGGAGCCCTGTTTTCCATAGTGTAATTCCATT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTGTAAATTGTTTTCTGTaGCTCTGTTCCACCAAACCA +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFVNCFL*LCSTKP
Trigger: TGGTTTGGTGGAACAGAGTCACAGAAAACAATTTAC...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380958.8
CDS-3UTR TCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCACTCAGCCTGGAGGTTaGTCCTCCTTTAGGAATAAA +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSTQPGG*SSFRNK
Trigger: TTTATTCCTAAAGGAGGATCAACCTCCAGGCTGAGT...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAGAAGGCAGACATATTTaGCTGGGACACGTTACTCAG +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAEGRHI*LGHVTQ
Trigger: CTGAGTAACGTGTCCCAGTCAAATATGTCTGCCTTC...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGGCCAAACCTGCTGTATaGATGGTACGCAATGCAGAA +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKAKPAV*MVRNAE
Trigger: TTCTGCATTGCGTACCATTCATACAGCAGGTTTGGC...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACTGTAAATTCTCTCGCTaGATTCCTGCCAAAGAGTTG +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYCKFSR*IPAKEL
Trigger: CAACTCTTTGGCAGGAATTCAGCGAGAGAATTTACA...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAAACAGTGTACCTGACTaGAGTGCAAGCAGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIANSVPD*SASSFA
Trigger: AGCAAAGCTGCTTGCACTTCAGTCAGGTACACTGTT...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCATCTTCAGTTGCATGGTaGGCACCCAGTGCTAGTAAA +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIASSVAW*APSASK
Trigger: TTTACTAGCACTGGGTGCTCACCATGCAACTGAAGA...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTTTCAAAGCTTTCAGGTaGAGAGAGGTGCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFFKAFR*REVLFL
Trigger: AAGAAAAAGCACCTCTCTTCACCTGAAAGCTTTGAA...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACACACCTAGGCAGAACTaGGAGTTCTTTGAAAACCAT +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYTPRQN*EFFENH
Trigger: ATGGTTTTCAAAGAACTCTCAGTTCTGCCTAGGTGT...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTATGACCAACGTTACATaGTTTCAAGGGTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLMTNVT*FQGLSF
Trigger: AAAGGACAACCCTTGAAATCATGTAACGTTGGTCAT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTATAAGCAACGTGAGGTaGAGTTGGAGGATAAATATG +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLISNVR*SWRINM
Trigger: CATATTTATCCTCCAACTGCACCTCACGTTGCTTAT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCGAAGGAAGGTGCGTTTaGTTTCGGTTGCATATAAGC +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSEGRCV*FRLHIS
Trigger: GCTTATATGCAACCGAAAGCAAACGCACCTTCCTTC...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCCATGAAGAAGGAAGGTaGGTTTGCTTTCGGTTGCAT +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSHEEGR*VCFRLH
Trigger: ATGCAACCGAAAGCAAACGCACCTTCCTTCTTCATG...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTAGAGGGCTCAGCAAATaGTTTAGTGGTAAATACTTC +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFRGLSK*FSGKYF
Trigger: GAAGTATTTACCACTAAAGCATTTGCTGAGCCCTCT...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACAGCATGGAAATCATATaGAAACACAAGAGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYSMEII*KHKRGL
Trigger: GAGCCCTCTCTTGTGTTTGCATATGATTTCCATGCT...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTATCCATAACTCGACATaGCAAACCTGCTGTATGAAT +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFIHNST*QTCCMN
Trigger: ATTCATACAGCAGGTTTGGCATGTCGAGTTATGGAT...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCTTCCTGCCAAAGAGTTaGAAGCCAAAGCCAACACAA +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSFLPKS*KPKPTQ
Trigger: TTGTGTTGGCTTTGGCTTGCAACTCTTTGGCAGGAA...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAAATCCAGGGAGCACCTaGTTCTGTCACCTGATGAAA +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIANPGST*FCHLMK
Trigger: TTTCATCAGGTGACAGAAGCAGGTGCTCCCTGGATT...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGAATCCAGGGAGCACCTaGTTCTGTCACCTGATGAAA +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKNPGST*FCHLMK
Trigger: TTTCATCAGGTGACAGAAGCAGGTGCTCCCTGGATT...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACCTACAACTGACCATTTaGAGCTGCAATCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYLQLTI*SCNQFL
Trigger: CAAGAACTGATTGCAGCTGCAAATGGTCAGTTGTAG...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCAAGTGCAAGCAGCTTTaGTCATCTCCTGTTCGTTTC +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSKCKQL*SSPVRF
Trigger: GAAACGAACAGGAGATGAGCAAAGCTGCTTGCACTT...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCACAATGGCAAAAACGCTaGCCAGCATTGCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAQWQKR*PALLPK
Trigger: TTTGGGAAGCAATGCTGGGCAGCGTTTTTGCCATTG...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGCACATTTTCTTCAGTTaGATGGTGAGCACCCAGTGC +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKHIFFS*MVSTQC
Trigger: GCACTGGGTGCTCACCATGCAACTGAAGAAAATGTG...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCAACATCAGTTGCAAGTaGTTGGAAGTCTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSNISCK*LEVCPD
Trigger: GTCAGGACAGACTTCCAAGCACTTGCAACTGATGTT...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTCAGGTGAAGAGAGGTaGTTTTTCTTGATGCAAATC +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLSGEER*FFLMQI
Trigger: GATTTGCATCAAGAAAAAGCACCTCTCTTCACCTGA...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCGATGTAAACTTGCCTTaGACAGGGAAGTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSDVNLP*TGKFAG
Trigger: ACCAGCAAACTTCCCTGTGCAAGGCAAGTTTACATC...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTAGGAATAAACTCGCTTaGAGTAGGATTTGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFRNKLA*SRIWCL
Trigger: AAGACACCAAATCCTACTGCAAGCGAGTTTATTCCT...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399613.1
CDS-3UTR CCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAGCAGACATATTTGACTaGGACACGTTACTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAADIFD*DTLLSL
Trigger: CAGGCTGAGTAACGTGTCCCAGTCAAATATGTCTGC...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCAGCAGGAGAAGTATGTaGAGTAATCTTGGGGGAATG +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSSRRSM*SNLGGM
Trigger: CATTCCCCCAAGATTACTCCACATACTTCTCCTGCT...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTGTAACTTGCTGGATTTaGAGTGTGACTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLVTCWI*SVTSSS
Trigger: AGAAGAAGAAGTCACACTCCAAATCCAGCAAGTTAC...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACCTCTGTAGGAACTGCTaGCATATCTGCTTGATCAAT +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYLCRNC*HICLIN
Trigger: ATTGATCAAGCAGATATGCCAGCAGTTCCTACAGAG...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCCCTCCGAAGGCAATATaGCAGATCATCTTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSPPKAI*QIIFAV
Trigger: AACAGCAAAGATGATCTGCCATATTGCCTTCGGAGG...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTGTTTCTCCTCCAGCATaGAAATCATATGCAAACACA +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLVSPPA*KSYANT
Trigger: TGTGTTTGCATATGATTTCCATGCTGGAGGAGAAAC...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGTCTGCTTGCTGGTACTaGGCCATTAATGCCAATGGA +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKSACWY*AINANG
Trigger: TCCATTGGCATTAATGGCCCAGTACCAGCAAGCAGA...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGATTGATGGGTACTCCTaGTTTACACCTGTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKIDGYS*FTPVSK
Trigger: CTTGCTGACAGGTGTAAATCAGGAGTACCCATCAAT...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380958.8
CDS-3UTR TCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACTTATTAAATGTCTGTTaGTCAGCTCCTGTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYLLNVC*SAPVGV
Trigger: AACTCCGACAGGAGCTGATCAACAGACATTTAATAA...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCACACCAATCATGGGCATaGTGTCATTTACACTTCGCA +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAHQSWA*CHLHFA
Trigger: TGCGAAGTGTAAATGACATCATGCCCATGATTGGTG...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACCAAGGTCTTCCTCTATaGCATCATTTCTCATTTGAG +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYQGLPL*HHFSFE
Trigger: CTCAAATGAGAAATGATGTCATAGAGGAAGACCTTG...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTGCTGCAATCAGTTCTTaGAAAGTATTTTCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLAAISS*KVFSKQ
Trigger: CTGCTTTGAAAATACTTTTCAAGAACTGATTGCAGC...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCAGCAAATACTACAACTaGCCATTTGCAGCTGCAATC +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSSKYYN*PFAAAI
Trigger: GATTGCAGCTGCAAATGGTCAGTTGTAGTATTTGCT...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTACAAAAATCTCAATTTaGACTAACAGTGGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFTKISI*TNSGWH
Trigger: ATGCCACCCACTGTTAGTTCAAATTGAGATTTTTGT...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACTTACTAGAAATTCCATaGATACCCAAGTTTGGCGAC +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYLLEIP*IPKFGD
Trigger: GTCGCCAAACTTGGGTATTCATGGAATTTCTAGTAA...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGCTTGGAAGTCTGTCCTaGCCTTTTGAGTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKLGSLS*PFEFPH
Trigger: ATGTGGAAACTCAAAAGGTCAGGACAGACTTCCAAG...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCACTTGGAAGTCTGTCCTaGCCTTTTGAGTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIALGSLS*PFEFPH
Trigger: ATGTGGAAACTCAAAAGGTCAGGACAGACTTCCAAG...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACACATTCTTGGATTTGTaGTGTAAACTTGCCTTGCAC +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYTFLDL*CKLALH
Trigger: GTGCAAGGCAAGTTTACATCACAAATCCAAGAATGT...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAAGGTTAACTAGGGGCTaGAGCAAACTAGCATTTAGG +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIARLTRG*SKLAFR
Trigger: CCTAAATGCTAGTTTGCTTCAGCCCCTAGTTAACCT...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACAAAATATGCATTACCTaGCACCAACCTTTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYKICIT*HQPFLA
Trigger: AGCCAGAAAAGGTTGGTGTCAGGTAATGCATATTTT...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACATGACCAACGTTACATaGTTTCAAGGGTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYMTNVT*FQGLSF
Trigger: AAAGGACAACCCTTGAAATCATGTAACGTTGGTCAT...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCACATGAAGAAGGAAGGTaGGTTTGCTTTCGGTTGCAT +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAHEEGR*VCFRLH
Trigger: ATGCAACCGAAAGCAAACGCACCTTCCTTCTTCATG...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACAACTGCTGGCATATCTaGTTGATCAATTTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYNCWHI*LINLSH
Trigger: ATGGCTCAAATTGATCAAGCAGATATGCCAGCAGTT...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACAGAGGGCTCAGCAAATaGTTTAGTGGTAAATACTTC +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYRGLSK*FSGKYF
Trigger: GAAGTATTTACCACTAAAGCATTTGCTGAGCCCTCT...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCCTACAACTGACCATTTaGAGCTGCAATCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSLQLTI*SCNQFL
Trigger: CAAGAACTGATTGCAGCTGCAAATGGTCAGTTGTAG...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAAACATCAGTTGCAAGTaGTTGGAAGTCTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIANISCK*LEVCPD
Trigger: GTCAGGACAGACTTCCAAGCACTTGCAACTGATGTT...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTTGTCTACCTTTTATATaGAAACCAAGTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFCLPFI*KPSPEV
Trigger: AACCTCAGGACTTGGTTTGCATATAAAAGGTAGACA...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGGATGTTAGAGGATCATaGGCTGAATATGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKDVRGS*AEYGLA
Trigger: TGCCAAGCCATATTCAGCCCATGATCCTCTAACATC...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGAGCAGGAGAAGTATGTaGAGTAATCTTGGGGGAATG +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKSRRSM*SNLGGM
Trigger: CATTCCCCCAAGATTACTCCACATACTTCTCCTGCT...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTAACGTGAGGTGCAGTTaGAGGATAAATATGATAGTT +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFNVRCS*RINMIV
Trigger: AACTATCATATTTATCCTCCAACTGCACCTCACGTT...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACAACCTGCTGTATGAATaGTACGCAATGCAGAACTTA +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYNLLYE*YAMQNL
Trigger: TAAGTTCTGCATTGCGTACCATTCATACAGCAGGTT...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACCACAGGGAAGTTTGCTaGTCTATACAGAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYHREVC*SIQNEK
Trigger: TTTCTCATTCTGTATAGACCAGCAAACTTCCCTGTG...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAGCTTGCAGTAGGATTTaGTGTCTTTCGTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAACSRI*CLSSLR
Trigger: TCTCAGAGACGAAAGACACCAAATCCTACTGCAAGC...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399613.1
CDS-3UTR TCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCACCAGAAGACGGAGTCTaGGAAACAGGATTATTAACA +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAPEDGV*ETGLLT
Trigger: TGTTAATAATCCTGTTTCTCAGACTCCGTCTTCTGG...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCTTATTAAATGTCTGTTaGTCAGCTCCTGTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSLLNVC*SAPVGV
Trigger: AACTCCGACAGGAGCTGATCAACAGACATTTAATAA...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACATATCCAAAATTACTTaGTTTCTGTATCCGGTTGGG +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYISKIT*FLYPVG
Trigger: CCCAACCGGATACAGAAATCAAGTAATTTTGGATAT...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGTGTAAATTCTCTCGCTaGATTCCTGCCAAAGAGTTG +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKCKFSR*IPAKEL
Trigger: CAACTCTTTGGCAGGAATTCAGCGAGAGAATTTACA...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGAACAGTCTTCCATTTTaGACCTCCTTTGCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKNSLPF*TSFARS
Trigger: AGACCTTGCAAAGGAGGTTCAAAATGGAAGACTGTT...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAAAGAAATTATATGACTaGGGTCAATCCAGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAKKLYD*GQSREH
Trigger: GTGCTCCCTGGATTGACCTCAGTCATATAATTTCTT...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAAGAGGTGCTTTTTCTTaGTGCAAATCTCAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIARGAFS*CKSQGR
Trigger: TCTGCCTTGAGATTTGCATCAAGAAAAAGCACCTCT...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCTTCAAAGCTTTCAGGTaGAGAGAGGTGCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSFKAFR*REVLFL
Trigger: AAGAAAAAGCACCTCTCTTCACCTGAAAGCTTTGAA...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTCTATTAGTCATTCTCTaGATCAGGGGATATTTTGTT +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLLLVIL*IRGYFV
Trigger: AACAAAATATCCCCTGATGCAGAGAATGACTAATAG...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTAGCTGTAGTGCAATTTaGTATTGGTTAAGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLSCSAI*YWLRSL
Trigger: TAAAGACCTTAACCAATAGCAAATTGCACTACAGCT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTTCCCAAAAATGTCCTTaGAAAGTTTCCCATTATAAG +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFSQKCP*KVSHYK
Trigger: CTTATAATGGGAAACTTTGCAAGGACATTTTTGGGA...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTAAAAAGAGCAAATTCTaGAACCCTCAATGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLKKSKF*NPQWQK
Trigger: TTTTTGCCATTGAGGGTTGCAGAATTTGCTCTTTTT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTAAAAAGAGCAAATTCTaGAACCCTCAATGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: AGLYRMRNSSPILTPALFKKSKF*NPQWQK
Trigger: TTTTTGCCATTGAGGGTTGCAGAATTTGCTCTTTTT...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAGGCATACAGAGAGCTTaGATACGATACTCTTACAAG +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAGIQRA*IRYSYK
Trigger: CTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCC...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACGGAAAGAGCTATACATaGTCCTTCAGTTACTGTTTA +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYGKSYT*SFSYCL
Trigger: TAAACAGTAACTGAAGGAGCATGTATAGCTCTTTCC...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCATTGCACAGGGAAGTTTaGTGGTCTATACAGAATGAG +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIALHREV*WSIQNE
Trigger: CTCATTCTGTATAGACCAGCAAACTTCCCTGTGCAA...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACAGTGCAATTTGCTATTaGTTAAGGTCTTTAGCCATG +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYSAICY*LRSLAM
Trigger: CATGGCTAAAGACCTTAACCAATAGCAAATTGCACT...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGATGAATACCCAAGTTTaGCGACAACTGCATGTCCAA +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKMNTQV*RQLHVQ
Trigger: TTGGACATGCAGTTGTCGCCAAACTTGGGTATTCAT...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCCACAGGGAAGTTTGCTaGTCTATACAGAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSHREVC*SIQNEK
Trigger: TTTCTCATTCTGTATAGACCAGCAAACTTCCCTGTG...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTGACACCAACCTTTTCTaGCTGACAATATTTATTCAT +
Preference number: 4 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLDTNLF*LTIFIH
Trigger: ATGAATAAATATTGTCAGCCAGAAAAGGTTGGTGTC...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAAATGGAATTACACTATaGAAAACAGGGCTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIANGITL*KTGLPQ
Trigger: TTGGGGGAGCCCTGTTTTCCATAGTGTAATTCCATT...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACCACGACAGGAAGGTGTaGAAAGTTTATATCCTTAAT +
Preference number: 4 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYHDRKV*KVYILN
Trigger: ATTAAGGATATAAACTTTCCACACCTTCCTGTCGTG...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR CAA 72 bp CAACAACTGATGCTACCAAACGTGGACTCAATATACTaGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: QQLMLPNVDSIY*LKRVKRVSSLQ
Trigger: TTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCACGTTTGGTAGCATCAGTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGCAAGGTCTTCCTCTATaGCATCATTTCTCATTTGAG +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKQGLPL*HHFSFE
Trigger: CTCAAATGAGAAATGATGTCATAGAGGAAGACCTTG...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGAGACAAGAAATTATATaGCTGAGGTCAATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKRQEII*LRSIQG
Trigger: TCCCTGGATTGACCTCAGTCATATAATTTCTTGTCT...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAAGACAAGAAATTATATaGCTGAGGTCAATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIARQEII*LRSIQG
Trigger: TCCCTGGATTGACCTCAGTCATATAATTTCTTGTCT...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCATTACTAGAAATTCCATaGATACCCAAGTTTGGCGAC +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIALLEIP*IPKFGD
Trigger: GTCGCCAAACTTGGGTATTCATGGAATTTCTAGTAA...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGACATTCTTGGATTTGTaGTGTAAACTTGCCTTGCAC +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKTFLDL*CKLALH
Trigger: GTGCAAGGCAAGTTTACATCACAAATCCAAGAATGT...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGAAAATATGCATTACCTaGCACCAACCTTTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKKICIT*HQPFLA
Trigger: AGCCAGAAAAGGTTGGTGTCAGGTAATGCATATTTT...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAATAAGCAACGTGAGGTaGAGTTGGAGGATAAATATG +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAISNVR*SWRINM
Trigger: CATATTTATCCTCCAACTGCACCTCACGTTGCTTAT...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGAACTGCTGGCATATCTaGTTGATCAATTTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKNCWHI*LINLSH
Trigger: ATGGCTCAAATTGATCAAGCAGATATGCCAGCAGTT...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAGTAACTTGCTGGATTTaGAGTGTGACTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAVTCWI*SVTSSS
Trigger: AGAAGAAGAAGTCACACTCCAAATCCAGCAAGTTAC...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCAACGTGAGGTGCAGTTaGAGGATAAATATGATAGTT +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSNVRCS*RINMIV
Trigger: AACTATCATATTTATCCTCCAACTGCACCTCACGTT...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAGTTTCTCCTCCAGCATaGAAATCATATGCAAACACA +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAVSPPA*KSYANT
Trigger: TGTGTTTGCATATGATTTCCATGCTGGAGGAGAAAC...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGAACCTGCTGTATGAATaGTACGCAATGCAGAACTTA +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKNLLYE*YAMQNL
Trigger: TAAGTTCTGCATTGCGTACCATTCATACAGCAGGTT...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCCTTCGCATCCTGTTTTaGTCAGTCAACAAATACAAA +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSLRILF*SVNKYK
Trigger: TTTGTATTTGTTGACTGACCAAAACAGGATGCGAAG...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
3UTR CAA 72 bp ATTAAAATTGAAGACAGTAACATCAGTTGCAAGTGCTaGGAAGTCTGTCCTGACCTTTTGAGTTTCCACATT +
Preference number: 4 (lower is better)
Translates to: IKIEDSNISCKC*EVCPDLLSFHI
Trigger: AATGTGGAAACTCAAAAGGTCAGGACAGACTTCCAAGCACTTGCAACTGATGTTACTGTCTTCAATTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR TCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGATATCCAAAATTACTTaGTTTCTGTATCCGGTTGGG +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKISKIT*FLYPVG
Trigger: CCCAACCGGATACAGAAATCAAGTAATTTTGGATAT...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCAGCTGTAGTGCAATTTaGTATTGGTTAAGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSSCSAI*YWLRSL
Trigger: TAAAGACCTTAACCAATAGCAAATTGCACTACAGCT...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCATGTCTACCTTTTATATaGAAACCAAGTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIACLPFI*KPSPEV
Trigger: AACCTCAGGACTTGGTTTGCATATAAAAGGTAGACA...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCATATCAGAATCTTTGTTaGATCCATAACTCGACATGC +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAYQNLC*IHNSTC
Trigger: GCATGTCGAGTTATGGATCCAACAAAGATTCTGATA...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGCTTCGCATCCTGTTTTaGTCAGTCAACAAATACAAA +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKLRILF*SVNKYK
Trigger: TTTGTATTTGTTGACTGACCAAAACAGGATGCGAAG...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCGACACCAACCTTTTCTaGCTGACAATATTTATTCAT +
Preference number: 4 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSDTNLF*LTIFIH
Trigger: ATGAATAAATATTGTCAGCCAGAAAAGGTTGGTGTC...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CCA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCACACGACAGGAAGGTGTaGAAAGTTTATATCCTTAAT +
Preference number: 4 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAHDRKV*KVYILN
Trigger: ATTAAGGATATAAACTTTCCACACCTTCCTGTCGTG...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR GCA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGCTATTAGTCATTCTCTaGATCAGGGGATATTTTGTT +
Preference number: 4 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKLLVIL*IRGYFV
Trigger: AACAAAATATCCCCTGATGCAGAGAATGACTAATAG...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS CCA 90 bp AGACGGGGGAGGAAAGGAAGACGCTGCCGGTGCCGGATAAAAGCCTaGGCGGGTGGGTCTGTCCCGCTGCGGGAGCCGGAGCCGCCCGGG +
Preference number: 5 (lower is better)
Translates to: RRGRKGRRCRCRIKA*AGGSVPLREPEPPG
Trigger: CCCGGGCGGCTCCGGCTCCCGCAGCGGGACAGACCCACCCGCCCAGGCTTTTATCCGGCACCGGCAGCGTCTTCCTTTCCTCCCCCGTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503791.5
CDS GCA 90 bp CGCCGCCACCACCATAGACGGGGGAGGAAAGGAAGACGCTGCCGGTaGCGGATAAAAGCCTGGGCGGGTGGGTCTGTCCCGCTGCGGGAG +
Preference number: 5 (lower is better)
Translates to: RRHHHRRGRKGRRCR*RIKAWAGGSVPLRE
Trigger: CTCCCGCAGCGGGACAGACCCACCCGCCCAGGCTTTTATCCGGCACCGGCAGCGTCTTCCTTTCCTCCCCCGTCTATGGTGGTGGCGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503791.5
CDS GCA 90 bp AGCCGCCGCCGCCACCACCATAGACGGGGGAGGAAAGGAAGACGCTaGCGGTGCCGGATAAAAGCCTGGGCGGGTGGGTCTGTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: SRRRHHHRRGRKGRR*RCRIKAWAGGSVPL
Trigger: CAGCGGGACAGACCCACCCGCCCAGGCTTTTATCCGGCACCGGCAGCGTCTTCCTTTCCTCCCCCGTCTATGGTGGTGGCGGCGGCGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503791.5
CDS TCA 90 bp CTTCTTCTGGGAGCAGGAGAAGTATGTGGAGTAATCTTGGGGGAATaGAGAGGGGAAGACCCAGCAGACAACGACATTCCTGGCGCTAAT +
Preference number: 5 (lower is better)
Translates to: LLLGAGEVCGVILGE*RGEDPADNDIPGAN
Trigger: ATTAGCGCCAGGAATGTCGTTGTCTGCTGGGTCTTCCCCTCTTCATTCCCCCAAGATTACTCCACATACTTCTCCTGCTCCCAGAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS GCA 90 bp CAGCTCCTGTCGGAGTTCATCAGCCATGAAGAAGGAAGGTGCGTTTaGTTTCGGTTGCATATAAGCAACGTGAGGTGCAGTTGGAGGATA +
Preference number: 5 (lower is better)
Translates to: QLLSEFISHEEGRCV*FRLHISNVRCSWRI
Trigger: TATCCTCCAACTGCACCTCACGTTGCTTATATGCAACCGAAAGCAAACGCACCTTCCTTCTTCATGGCTGATGAACTCCGACAGGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS GCA 90 bp GTTGATCAGCTCCTGTCGGAGTTCATCAGCCATGAAGAAGGAAGGTaGGTTTGCTTTCGGTTGCATATAAGCAACGTGAGGTGCAGTTGG +
Preference number: 5 (lower is better)
Translates to: VDQLLSEFISHEEGR*VCFRLHISNVRCSW
Trigger: CCAACTGCACCTCACGTTGCTTATATGCAACCGAAAGCAAACGCACCTTCCTTCTTCATGGCTGATGAACTCCGACAGGAGCTGATCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS CCA 90 bp TGGATTTGGAGTGTGACTTCTTCTTCTGGGAGCAGGAGAAGTATGTaGAGTAATCTTGGGGGAATGAAGAGGGGAAGACCCAGCAGACAA +
Preference number: 5 (lower is better)
Translates to: WIWSVTSSSGSRRSM*SNLGGMKRGRPSRQ
Trigger: TTGTCTGCTGGGTCTTCCCCTCTTCATTCCCCCAAGATTACTCCACATACTTCTCCTGCTCCCAGAAGAAGAAGTCACACTCCAAATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000483842.1
ENST00000503791.5
CDS-3UTR CAA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTCATCCATTCCTGGAATaGCCAGCCGCGGTCCATCGA +
Preference number: 5 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLHPFLE*PAAVHR
Trigger: TCGATGGACCGCGGCTGGCAATTCCAGGAATGGATG...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS CCA 90 bp AACAGATGTAGAGGCACTAGAAGGCACCATGTAACTTGCTGGATTTaGAGTGTGACTTCTTCTTCTGGGAGCAGGAGAAGTATGTGGAGT +
Preference number: 5 (lower is better)
Translates to: NRCRGTRRHHVTCWI*SVTSSSGSRRSMWS
Trigger: ACTCCACATACTTCTCCTGCTCCCAGAAGAAGAAGTCACACTCCAAATCCAGCAAGTTACATGGTGCCTTCTAGTGCCTCTACATCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000483842.1
ENST00000503791.5
CDS-3UTR CAA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTCCAGGCGATACTTCCTaGGCTTTCGTCTCTGAGAGA +
Preference number: 5 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLPGDTS*AFVSER
Trigger: TCTCTCAGAGACGAAAGCCAAGGAAGTATCGCCTGG...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380958.8
CDS TCA 90 bp AAGATGATCCCTAAAGAGTTTCAACAGATAACGGTCTCCAGTCTCTaGCCAAGTGGGATCCTTCTGAAACTCCGGCCTCTCATTGATTGT +
Preference number: 5 (lower is better)
Translates to: KMIPKEFQQITVSSL*PSGILLKLRPLIDC
Trigger: ACAATCAATGAGAGGCCGGAGTTTCAGAAGGATCCCACTTGGTCAGAGACTGGAGACCGTTATCTGTTGAAACTCTTTAGGGATCATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGCATCCATTCCTGGAATaGCCAGCCGCGGTCCATCGA +
Preference number: 5 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKHPFLE*PAAVHR
Trigger: TCGATGGACCGCGGCTGGCAATTCCAGGAATGGATG...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS TCA 90 bp GTTTTCTGTGACTCTGTTCCACCAAACCATATTGATGGGTACTCCTaGTTTACACCTGTCAGCAAGGCAGCCAATAGGGTTCTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: VFCDSVPPNHIDGYS*FTPVSKAANRVLCF
Trigger: AAAGCAAAGAACCCTATTGGCTGCCTTGCTGACAGGTGTAAATCAGGAGTACCCATCAATATGGTTTGGTGGAACAGAGTCACAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000503791.5
CDS GCA 90 bp AGGATTATTAACAGATGTAGAGGCACTAGAAGGCACCATGTAACTTaGTGGATTTGGAGTGTGACTTCTTCTTCTGGGAGCAGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: RIINRCRGTRRHHVT*WIWSVTSSSGSRRS
Trigger: ACTTCTCCTGCTCCCAGAAGAAGAAGTCACACTCCAAATCCAGCAAGTTACATGGTGCCTTCTAGTGCCTCTACATCTGTTAATAATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000483842.1
ENST00000503791.5
CDS GCA 90 bp TCCCTTCAGTTAAACAAACAGACCCCTCATAGAGCTGTCCAACGCTaGCCAAACTATCCATCCTTTAGTCGAATCAGTCAGTTTCATGAA +
Preference number: 5 (lower is better)
Translates to: SLQLNKQTPHRAVQR*PNYPSFSRISQFHE
Trigger: TTCATGAAACTGACTGATTCGACTAAAGGATGGATAGTTTGGGCAGCGTTGGACAGCTCTATGAGGGGTCTGTTTGTTTAACTGAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483842.1
CDS-3UTR CAA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTGGGCTGAATATGGCTaGGCACTGTCATTTAGAAGG +
Preference number: 5 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLWAEYG*ALSFRR
Trigger: CCTTCTAAATGACAGTGCCAAGCCATATTCAGCCCA...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACTTGCTTTTCGTGCCTTaGATCCCATCGGAACTAGCC +
Preference number: 5 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYLLFVP*IPSELA
Trigger: GGCTAGTTCCGATGGGATCAAAGGCACGAAAAGCAA...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380958.8
CDS-3UTR CAA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTAAACGCTGCCCAGCATaGCTTCCCAAAAATGTCCTT +
Preference number: 5 (lower is better)
Translates to: AGLYRMRNSSPILTPALFKRCPA*LPKNVL
Trigger: AAGGACATTTTTGGGAAGCAATGCTGGGCAGCGTTT...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACCCACATTTTCTTCAGTaGCATGGTGAGCACCCAGTG +
Preference number: 5 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYPHFLQ*HGEHPV
Trigger: CACTGGGTGCTCACCATGCAACTGAAGAAAATGTGG...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS GCA 90 bp GAAGGAAGGTGCGTTTGCTTTCGGTTGCATATAAGCAACGTGAGGTaGAGTTGGAGGATAAATATGATAGTTTGGAAACACCATTCCAGT +
Preference number: 5 (lower is better)
Translates to: EGRCVCFRLHISNVR*SWRINMIVWKHHSS
Trigger: ACTGGAATGGTGTTTCCAAACTATCATATTTATCCTCCAACTGCACCTCACGTTGCTTATATGCAACCGAAAGCAAACGCACCTTCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS CCA 90 bp ATTATTAACAGATGTAGAGGCACTAGAAGGCACCATGTAACTTGCTaGATTTGGAGTGTGACTTCTTCTTCTGGGAGCAGGAGAAGTATG +
Preference number: 5 (lower is better)
Translates to: IINRCRGTRRHHVTC*IWSVTSSSGSRRSM
Trigger: CATACTTCTCCTGCTCCCAGAAGAAGAAGTCACACTCCAAATCCAGCAAGTTACATGGTGCCTTCTAGTGCCTCTACATCTGTTAATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000483842.1
ENST00000503791.5
CDS CCA 90 bp AGGTGCGTTTGCTTTCGGTTGCATATAAGCAACGTGAGGTGCAGTTaGAGGATAAATATGATAGTTTGGAAACACCATTCCAGTCAAAGG +
Preference number: 5 (lower is better)
Translates to: RCVCFRLHISNVRCS*RINMIVWKHHSSQR
Trigger: CCTTTGACTGGAATGGTGTTTCCAAACTATCATATTTATCCTCCAACTGCACCTCACGTTGCTTATATGCAACCGAAAGCAAACGCACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS-3UTR CAA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAGATTTCTGTATCCGGTaGGGAGGTGGCAGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIADFCIR*GGGSGS
Trigger: AGAACCACTGCCACCTCCCAACCGGATACAGAAATC...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGGATTTCTGTATCCGGTaGGGAGGTGGCAGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKDFCIR*GGGSGS
Trigger: AGAACCACTGCCACCTCCCAACCGGATACAGAAATC...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTAACTCCGGCCTCTCATaGATTGTTCCCAATTTTGCT +
Preference number: 5 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLNSGLS*IVPNFA
Trigger: AGCAAAATTGGGAACAATCAATGAGAGGCCGGAGTT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACGCATCAGGGGATATTTaGTTTCTACAGGGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYASGDI*FLQGFQ
Trigger: TTGGAAGCCCTGTAGAAACAAAATATCCCCTGATGC...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTTGTAACTTGCTGGATTaGGAGTGTGACTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: AGLYRMRNSSPILTPALFCNLLD*ECDFFF
Trigger: GAAGAAGAAGTCACACTCCAAATCCAGCAAGTTACA...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTCAAAGGTGCTGGAGTaGTGTCTGTATAGAAGTAAG +
Preference number: 5 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLSKVLE*CLYRSK
Trigger: CTTACTTCTATACAGACACAACTCCAGCACCTTTGA...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTCAACGTGAGGTGCAGTaGGAGGATAAATATGATAGT +
Preference number: 5 (lower is better)
Translates to: AGLYRMRNSSPILTPALFQREVQ*EDKYDS
Trigger: ACTATCATATTTATCCTCCAACTGCACCTCACGTTG...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTCAACGTGAGGTGCAGTaGGAGGATAAATATGATAGT +
Preference number: 5 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLQREVQ*EDKYDS
Trigger: ACTATCATATTTATCCTCCAACTGCACCTCACGTTG...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTGTTATTAAATGTCTGTaGATCAGCTCCTGTCGGAGT +
Preference number: 5 (lower is better)
Translates to: AGLYRMRNSSPILTPALFVIKCL*ISSCRS
Trigger: ACTCCGACAGGAGCTGATCAACAGACATTTAATAAC...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTTGCTGGCATATCTGCTaGATCAATTTGAGCCATTGT +
Preference number: 5 (lower is better)
Translates to: AGLYRMRNSSPILTPALFCWHIC*INLSHC
Trigger: ACAATGGCTCAAATTGATCAAGCAGATATGCCAGCA...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTTGAGCAGCATCCAATaGAGTATAAAATCGAGCACC +
Preference number: 5 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLLSSIQ*SIKSST
Trigger: GGTGCTCGATTTTATACTCAATTGGATGCTGCTCAA...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTAAACAGTCTTCCATTTaGAACCTCCTTTGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLKQSSI*NLLCKV
Trigger: GACCTTGCAAAGGAGGTTCAAAATGGAAGACTGTTT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACAACTCCGGCCTCTCATaGATTGTTCCCAATTTTGCT +
Preference number: 5 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYNSGLS*IVPNFA
Trigger: AGCAAAATTGGGAACAATCAATGAGAGGCCGGAGTT...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCCATGAATACCCAAGTTaGGCGACAACTGCATGTCCA +
Preference number: 5 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSHEYPS*ATTACP
Trigger: TGGACATGCAGTTGTCGCCAAACTTGGGTATTCATG...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGCCACATTTTCTTCAGTaGCATGGTGAGCACCCAGTG +
Preference number: 5 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKPHFLQ*HGEHPV
Trigger: CACTGGGTGCTCACCATGCAACTGAAGAAAATGTGG...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTGTCTGTCCTGACCTTTaGAGTTTCCACATTTTCTTC +
Preference number: 5 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLVCPDL*SFHIFF
Trigger: GAAGAAAATGTGGAAACTCAAAAGGTCAGGACAGAC...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS TCA 90 bp AGAATCTTTGTTGGATCCATAACTCGACATGCCAAACCTGCTGTATaGATGGTACGCAATGCAGAACTTAGTTGGACAATATATGCCCAA +
Preference number: 5 (lower is better)
Translates to: RIFVGSITRHAKPAV*MVRNAELSWTIYAQ
Trigger: TTGGGCATATATTGTCCAACTAAGTTCTGCATTGCGTACCATTCATACAGCAGGTTTGGCATGTCGAGTTATGGATCCAACAAAGATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS TCA 90 bp GAGCAGCATCCAATTGAGTATAAAATCGAGCACCAATCATGGGCATaGTGTCATTTACACTTCGCATCCTGTTTTGGTCAGTCAACAAAT +
Preference number: 5 (lower is better)
Translates to: EQHPIEYKIEHQSWA*CHLHFASCFGQSTN
Trigger: ATTTGTTGACTGACCAAAACAGGATGCGAAGTGTAAATGACATCATGCCCATGATTGGTGCTCGATTTTATACTCAATTGGATGCTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS CCA 90 bp TTAGGGTCATTAAAGTGTCTGCTCATCATAGTTTCTCCTCCAGCATaGAAATCATATGCAAACACAAGAGAGGGCTCAGCAAATGCTTTA +
Preference number: 5 (lower is better)
Translates to: LGSLKCLLIIVSPPA*KSYANTREGSANAL
Trigger: TAAAGCATTTGCTGAGCCCTCTCTTGTGTTTGCATATGATTTCCATGCTGGAGGAGAAACTATGATGAGCAGACACTTTAATGACCCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS CCA 90 bp ACAATTTACTCGCAACCTTGTTTTGCCAGTTATCAGAATCTTTGTTaGATCCATAACTCGACATGCCAAACCTGCTGTATGAATGGTACG +
Preference number: 5 (lower is better)
Translates to: TIYSQPCFASYQNLC*IHNSTCQTCCMNGT
Trigger: CGTACCATTCATACAGCAGGTTTGGCATGTCGAGTTATGGATCCAACAAAGATTCTGATAACTGGCAAAACAAGGTTGCGAGTAAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS-3UTR CAA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAGGGCTTCCAAATCCATaGACTCCAATAAAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAGLPNP*TPIKLV
Trigger: CACCAGCTTTATTGGAGTCAATGGATTTGGAAGCCC...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGGGGCTTCCAAATCCATaGACTCCAATAAAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKGLPNP*TPIKLV
Trigger: CACCAGCTTTATTGGAGTCAATGGATTTGGAAGCCC...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCATGGGCTGAATATGGCTaGGCACTGTCATTTAGAAGG +
Preference number: 5 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAWAEYG*ALSFRR
Trigger: CCTTCTAAATGACAGTGCCAAGCCATATTCAGCCCA...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCAGAAGGCAGACATATTaGACTGGGACACGTTACTCA +
Preference number: 5 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSRRQTY*TGTRYS
Trigger: TGAGTAACGTGTCCCAGTCAAATATGTCTGCCTTCT...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACTGTAACTTGCTGGATTaGGAGTGTGACTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYCNLLD*ECDFFF
Trigger: GAAGAAGAAGTCACACTCCAAATCCAGCAAGTTACA...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGAAGGCACCATGTAACTaGCTGGATTTGGAGTGTGAC +
Preference number: 5 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKKAPCN*LDLECD
Trigger: GTCACACTCCAAATCCAGCAAGTTACATGGTGCCTT...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAAAGGCACCATGTAACTaGCTGGATTTGGAGTGTGAC +
Preference number: 5 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAKAPCN*LDLECD
Trigger: GTCACACTCCAAATCCAGCAAGTTACATGGTGCCTT...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACTCAAAGGTGCTGGAGTaGTGTCTGTATAGAAGTAAG +
Preference number: 5 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYSKVLE*CLYRSK
Trigger: CTTACTTCTATACAGACACAACTCCAGCACCTTTGA...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGTGCGTTTGCTTTCGGTaGCATATAAGCAACGTGAGG +
Preference number: 5 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKCVCFR*HISNVR
Trigger: CCTCACGTTGCTTATATGCAACCGAAAGCAAACGCA...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACTTGAGCAGCATCCAATaGAGTATAAAATCGAGCACC +
Preference number: 5 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYLSSIQ*SIKSST
Trigger: GGTGCTCGATTTTATACTCAATTGGATGCTGCTCAA...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTGACATCATTTCTCATTaGAGCAGCATCCAATTGAGT +
Preference number: 5 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLDIISH*SSIQLS
Trigger: ACTCAATTGGATGCTGCTCAAATGAGAAATGATGTC...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACACTACAACTGACCATTaGCAGCTGCAATCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYTTTDH*QLQSVL
Trigger: AAGAACTGATTGCAGCTGCAAATGGTCAGTTGTAGT...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGGAAGTGCAAGCAGCTTaGCTCATCTCCTGTTCGTTT +
Preference number: 5 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKEVQAA*LISCSF
Trigger: AAACGAACAGGAGATGAGCAAAGCTGCTTGCACTTC...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAGAAGTGCAAGCAGCTTaGCTCATCTCCTGTTCGTTT +
Preference number: 5 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAEVQAA*LISCSF
Trigger: AAACGAACAGGAGATGAGCAAAGCTGCTTGCACTTC...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGAAACGCTGCCCAGCATaGCTTCCCAAAAATGTCCTT +
Preference number: 5 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKKRCPA*LPKNVL
Trigger: AAGGACATTTTTGGGAAGCAATGCTGGGCAGCGTTT...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCACATGAATACCCAAGTTaGGCGACAACTGCATGTCCA +
Preference number: 5 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAHEYPS*ATTACP
Trigger: TGGACATGCAGTTGTCGCCAAACTTGGGTATTCATG...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACGTCTGTCCTGACCTTTaGAGTTTCCACATTTTCTTC +
Preference number: 5 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYVCPDL*SFHIFF
Trigger: GAAGAAAATGTGGAAACTCAAAAGGTCAGGACAGAC...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTTTGGTGTCTGTAAATaGTTTTCTGTGACTCTGTTC +
Preference number: 5 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLFGVCK*FSVTLF
Trigger: GAACAGAGTCACAGAAAACAATTTACAGACACCAAA...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000380958.8
CDS-3UTR CAA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCTGCTGGCATATCTGCTaGATCAATTTGAGCCATTGT +
Preference number: 5 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSCWHIC*INLSHC
Trigger: ACAATGGCTCAAATTGATCAAGCAGATATGCCAGCA...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACACTCGCAACCTTGTTTaGCCAGTTATCAGAATCTTT +
Preference number: 5 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYTRNLV*PVIRIF
Trigger: AAAGATTCTGATAACTGGCAAAACAAGGTTGCGAGT...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp TGCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTAATTTACTCGCAACCTaGTTTTGCCAGTTATCAGAA +
Preference number: 5 (lower is better)
Translates to: CWSIQNEKFKPYFNPCPLNLLAT*FCQLSE
Trigger: TTCTGATAACTGGCAAAACAAGGTTGCGAGTAAATT...AAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACACTTCGCATCCTGTTTaGGTCAGTCAACAAATACAA +
Preference number: 5 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYTSHPV*VSQQIQ
Trigger: TTGTATTTGTTGACTGACCAAAACAGGATGCGAAGT...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GGTGGCATACAGAGAGCTTGCATACGATACTCTTACAAGAATTACGTACTATACGACATCATTTCTCATTaGAGCAGCATCCAATTGAGT +
Preference number: 5 (lower is better)
Translates to: GGIQRACIRYSYKNYVLYDIISH*SSIQLS
Trigger: ACTCAATTGGATGCTGCTCAAATGAGAAATGATGTC...GTATAGTACGTAATTCTTGTAAGAGTATCGTATGCAAGCTCTCTGTATGCCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GCTGGTCTATACAGAATGAGAAATTCAAGCCCTATTTTAACCCCTGCCCTCTTTGTGGACTCAATATACTaGTTAAAACGTGTAAAGCGT +
Preference number: 5 (lower is better)
Translates to: AGLYRMRNSSPILTPALFVDSIY*LKRVKR
Trigger: ACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC...AAAGAGGGCAGGGGTTAAAATAGGGCTTGAATTTCTCATTCTGTATAGACCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS TCA 90 bp CAGTCAACAAATACAAAATCAGATTCTTCAGGTCAGAGGAATAGTTaGTTGTCACCAGTTCCATGGCTTTCTGTAAATTCTCTCGCTGAA +
Preference number: 5 (lower is better)
Translates to: QSTNTKSDSSGQRNS*LSPVPWLSVNSLAE
Trigger: TTCAGCGAGAGAATTTACAGAAAGCCATGGAACTGGTGACAATCAACTATTCCTCTGACCTGAAGAATCTGATTTTGTATTTGTTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS CCA 90 bp CTTTGTGTTAACAAGACGAAAACCATGTATCCTCCGAAGGCAATATaGCAGATCATCTTTGCTGTTTACAGCTTTGTAGCAAGATGTAAT +
Preference number: 5 (lower is better)
Translates to: LCVNKTKTMYPPKAI*QIIFAVYSFVARCN
Trigger: ATTACATCTTGCTACAAAGCTGTAAACAGCAAAGATGATCTGCCATATTGCCTTCGGAGGATACATGGTTTTCGTCTTGTTAACACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS-3UTR CAA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAGTTATTAAATGTCTGTaGATCAGCTCCTGTCGGAGT +
Preference number: 5 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAVIKCL*ISSCRS
Trigger: ACTCCGACAGGAGCTGATCAACAGACATTTAATAAC...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCACTCGCAACCTTGTTTaGCCAGTTATCAGAATCTTT +
Preference number: 5 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSTRNLV*PVIRIF
Trigger: AAAGATTCTGATAACTGGCAAAACAAGGTTGCGAGT...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCACTTCGCATCCTGTTTaGGTCAGTCAACAAATACAA +
Preference number: 5 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSTSHPV*VSQQIQ
Trigger: TTGTATTTGTTGACTGACCAAAACAGGATGCGAAGT...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAACTACAACTGACCATTaGCAGCTGCAATCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIATTTDH*QLQSVL
Trigger: AAGAACTGATTGCAGCTGCAAATGGTCAGTTGTAGT...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp GTGGACTCAATATACTTGTTAAAACGTGTAAAGCGTGTCTCTAGTCTTCAAAGCATTTGTGATGTAAACTaGCCTTGCACAGGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: VDSIYLLKRVKRVSSLQSICDVN*PCTGKF
Trigger: AAACTTCCCTGTGCAAGGCAAGTTTACATCACAAAT...GCTTTGAAGACTAGAGACACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS TCA 90 bp GCTTTAGTGGTAAATACTTCACGCAAAGTTACGATATTTGAGTGTTaGATTTTCTTCCACATGTCGACCAACACCATGCACTTTGTGTTA +
Preference number: 5 (lower is better)
Translates to: ALVVNTSRKVTIFEC*IFFHMSTNTMHFVL
Trigger: TAACACAAAGTGCATGGTGTTGGTCGACATGTGGAAGAAAATTCAACACTCAAATATCGTAACTTTGCGTGAAGTATTTACCACTAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS TCA 90 bp AGCAAATGCTTTAGTGGTAAATACTTCACGCAAAGTTACGATATTTaGGTGTTGAATTTTCTTCCACATGTCGACCAACACCATGCACTT +
Preference number: 5 (lower is better)
Translates to: SKCFSGKYFTQSYDI*VLNFLPHVDQHHAL
Trigger: AAGTGCATGGTGTTGGTCGACATGTGGAAGAAAATTCAACACTCAAATATCGTAACTTTGCGTGAAGTATTTACCACTAAAGCATTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS-3UTR CAA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGTTCCACCAAACCATATaGATGGGTACTCCTGATTTA +
Preference number: 5 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKFHQTI*MGTPDL
Trigger: TAAATCAGGAGTACCCATCAATATGGTTTGGTGGAA...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380958.8
CDS-3UTR CAA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGAATTTACTCGCAACCTaGTTTTGCCAGTTATCAGAA +
Preference number: 5 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKNLLAT*FCQLSE
Trigger: TTCTGATAACTGGCAAAACAAGGTTGCGAGTAAATT...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp TTAAGAGGAGGAAAATCCCAAACTTTTGAGATGGACTTATTCAGGAATATCGCAGTGGACTCAATATACTaGTTAAAACGTGTAAAGCGT +
Preference number: 5 (lower is better)
Translates to: LRGGKSQTFEMDLFRNIAVDSIY*LKRVKR
Trigger: ACGCTTTACACGTTTTAACAAGTATATTGAGTCCAC...TGCGATATTCCTGAATAAGTCCATCTCAAAAGTTTGGGATTTTCCTCCTCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS-3UTR CAA 90 bp AATTCCATGAATACCCAAGTTTGGCGACAACTGCATGTCCAAATATTAAGAAAGTTTTTAGGGAAGTTGTaGACATCCAAATCACAGAAC +
Preference number: 5 (lower is better)
Translates to: NSMNTQVWRQLHVQILRKFLGKL*TSKSQN
Trigger: GTTCTGTGATTTGGATGTCAACAACTTCCCTAAAAA...CTTTCTTAATATTTGGACATGCAGTTGTCGCCAAACTTGGGTATTCATGGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS GCA 72 bp GCCCGCGACGGCTCCCGGCGGAAAGCCGGCCACGGGTaGACCAGCCAGAGCCAGGGGGACGCTGTTGCTATG +
Preference number: 6 (lower is better)
Translates to: ARDGSRRKAGHG*TSQSQGDAVAM
Trigger: CATAGCAACAGCGTCCCCCTGGCTCTGGCTGGTGCACCCGTGGCCGGCTTTCCGCCGGGAGCCGTCGCGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000503791.5
CDS GCA 72 bp GAATTGCCAGCCGCGGTCCATCGAGTCCCCCGCTACTaGCTCCTCCGCCGGCTGCGGCTCCGGTCCCCGGGT +
Preference number: 6 (lower is better)
Translates to: ELPAAVHRVPRY*LLRRLRLRSPG
Trigger: ACCCGGGGACCGGAGCCGCAGCCGGCGGAGGAGGCAGTAGCGGGGGACTCGATGGACCGCGGCTGGCAATTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000503791.5
CDS CCA 72 bp AAGACGCTGCCGGTGCCGGATAAAAGCCTGGGCGGGTaGGTCTGTCCCGCTGCGGGAGCCGGAGCCGCCCGG +
Preference number: 6 (lower is better)
Translates to: KTLPVPDKSLGG*VCPAAGAGAAR
Trigger: CCGGGCGGCTCCGGCTCCCGCAGCGGGACAGACCCACCCGCCCAGGCTTTTATCCGGCACCGGCAGCGTCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503791.5
CDS CCA 72 bp AGGAAAGGAAGACGCTGCCGGTGCCGGATAAAAGCCTaGGCGGGTGGGTCTGTCCCGCTGCGGGAGCCGGAG +
Preference number: 6 (lower is better)
Translates to: RKGRRCRCRIKA*AGGSVPLREPE
Trigger: CTCCGGCTCCCGCAGCGGGACAGACCCACCCGCCCAGGCTTTTATCCGGCACCGGCAGCGTCTTCCTTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503791.5
CDS GCA 72 bp CACCATAGACGGGGGAGGAAAGGAAGACGCTGCCGGTaGCGGATAAAAGCCTGGGCGGGTGGGTCTGTCCCG +
Preference number: 6 (lower is better)
Translates to: HHRRGRKGRRCR*RIKAWAGGSVP
Trigger: CGGGACAGACCCACCCGCCCAGGCTTTTATCCGGCACCGGCAGCGTCTTCCTTTCCTCCCCCGTCTATGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503791.5
CDS GCA 72 bp CGCCACCACCATAGACGGGGGAGGAAAGGAAGACGCTaGCGGTGCCGGATAAAAGCCTGGGCGGGTGGGTCT +
Preference number: 6 (lower is better)
Translates to: RHHHRRGRKGRR*RCRIKAWAGGS
Trigger: AGACCCACCCGCCCAGGCTTTTATCCGGCACCGGCAGCGTCTTCCTTTCCTCCCCCGTCTATGGTGGTGGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503791.5
CDS TCA 72 bp GGAGCAGGAGAAGTATGTGGAGTAATCTTGGGGGAATaGAGAGGGGAAGACCCAGCAGACAACGACATTCCT +
Preference number: 6 (lower is better)
Translates to: GAGEVCGVILGE*RGEDPADNDIP
Trigger: AGGAATGTCGTTGTCTGCTGGGTCTTCCCCTCTTCATTCCCCCAAGATTACTCCACATACTTCTCCTGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000483842.1
ENST00000503791.5
CDS TCA 72 bp CCTAAAGAGTTTCAACAGATAACGGTCTCCAGTCTCTaGCCAAGTGGGATCCTTCTGAAACTCCGGCCTCTC +
Preference number: 6 (lower is better)
Translates to: PKEFQQITVSSL*PSGILLKLRPL
Trigger: GAGAGGCCGGAGTTTCAGAAGGATCCCACTTGGTCAGAGACTGGAGACCGTTATCTGTTGAAACTCTTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS GCA 72 bp CTCCTGTCGGAGTTCATCAGCCATGAAGAAGGAAGGTaGGTTTGCTTTCGGTTGCATATAAGCAACGTGAGG +
Preference number: 6 (lower is better)
Translates to: LLSEFISHEEGR*VCFRLHISNVR
Trigger: CCTCACGTTGCTTATATGCAACCGAAAGCAAACGCACCTTCCTTCTTCATGGCTGATGAACTCCGACAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS CCA 72 bp AGTGTGACTTCTTCTTCTGGGAGCAGGAGAAGTATGTaGAGTAATCTTGGGGGAATGAAGAGGGGAAGACCC +
Preference number: 6 (lower is better)
Translates to: SVTSSSGSRRSM*SNLGGMKRGRP
Trigger: GGGTCTTCCCCTCTTCATTCCCCCAAGATTACTCCACATACTTCTCCTGCTCCCAGAAGAAGAAGTCACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000483842.1
ENST00000503791.5
CDS CAA 72 bp GCAGGTGATGTTAGAGGATCATGGGCTGAATATGGCTaGGCACTGTCATTTAGAAGGCTTGGGGAGCTGCTA +
Preference number: 6 (lower is better)
Translates to: AGDVRGSWAEYG*ALSFRRLGELL
Trigger: TAGCAGCTCCCCAAGCCTTCTAAATGACAGTGCCAAGCCATATTCAGCCCATGATCCTCTAACATCACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS GCA 72 bp TCGGAGTTCATCAGCCATGAAGAAGGAAGGTGCGTTTaGTTTCGGTTGCATATAAGCAACGTGAGGTGCAGT +
Preference number: 6 (lower is better)
Translates to: SEFISHEEGRCV*FRLHISNVRCS
Trigger: ACTGCACCTCACGTTGCTTATATGCAACCGAAAGCAAACGCACCTTCCTTCTTCATGGCTGATGAACTCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS CCA 72 bp AGATGTAGAGGCACTAGAAGGCACCATGTAACTTGCTaGATTTGGAGTGTGACTTCTTCTTCTGGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: RCRGTRRHHVTC*IWSVTSSSGSR
Trigger: CCTGCTCCCAGAAGAAGAAGTCACACTCCAAATCCAGCAAGTTACATGGTGCCTTCTAGTGCCTCTACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000483842.1
ENST00000503791.5
CDS TCA 72 bp GACTCTGTTCCACCAAACCATATTGATGGGTACTCCTaGTTTACACCTGTCAGCAAGGCAGCCAATAGGGTT +
Preference number: 6 (lower is better)
Translates to: DSVPPNHIDGYS*FTPVSKAANRV
Trigger: AACCCTATTGGCTGCCTTGCTGACAGGTGTAAATCAGGAGTACCCATCAATATGGTTTGGTGGAACAGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000503791.5
CDS CAA 72 bp ATGGGTGAGAGAAAACTTGAGAGAAGGCAGACATATTaGACTGGGACACGTTACTCAGCCTGGAGGTTGATC +
Preference number: 6 (lower is better)
Translates to: MGERKLERRQTY*TGTRYSAWRLI
Trigger: GATCAACCTCCAGGCTGAGTAACGTGTCCCAGTCAAATATGTCTGCCTTCTCTCAAGTTTTCTCTCACCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS CAA 72 bp ATCAGCCATGAAGAAGGAAGGTGCGTTTGCTTTCGGTaGCATATAAGCAACGTGAGGTGCAGTTGGAGGATA +
Preference number: 6 (lower is better)
Translates to: ISHEEGRCVCFR*HISNVRCSWRI
Trigger: TATCCTCCAACTGCACCTCACGTTGCTTATATGCAACCGAAAGCAAACGCACCTTCCTTCTTCATGGCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS GCA 72 bp TTAAACAAACAGACCCCTCATAGAGCTGTCCAACGCTaGCCAAACTATCCATCCTTTAGTCGAATCAGTCAG +
Preference number: 6 (lower is better)
Translates to: LNKQTPHRAVQR*PNYPSFSRISQ
Trigger: CTGACTGATTCGACTAAAGGATGGATAGTTTGGGCAGCGTTGGACAGCTCTATGAGGGGTCTGTTTGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483842.1
CDS CAA 72 bp AGTTTGGAAACACCATTCCAGTCAAAGGTGCTGGAGTaGTGTCTGTATAGAAGTAAGTCGTCCCACCAACAG +
Preference number: 6 (lower is better)
Translates to: SLETPFQSKVLE*CLYRSKSSHQQ
Trigger: CTGTTGGTGGGACGACTTACTTCTATACAGACACAACTCCAGCACCTTTGACTGGAATGGTGTTTCCAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS CAA 90 bp TCGGAGTTCATCAGCCATGAAGAAGGAAGGTGCGTTTGCTTTCGGTaGCATATAAGCAACGTGAGGTGCAGTTGGAGGATAAATATGATA +
Preference number: 6 (lower is better)
Translates to: SEFISHEEGRCVCFR*HISNVRCSWRINMI
Trigger: TATCATATTTATCCTCCAACTGCACCTCACGTTGCTTATATGCAACCGAAAGCAAACGCACCTTCCTTCTTCATGGCTGATGAACTCCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS TCA 72 bp ACACCAGCATCTAGCTTGTTAAGACAAGAAATTATATaGCTGAGGTCAATCCAGGGAGCACCTGCTTCTGTC +
Preference number: 6 (lower is better)
Translates to: TPASSLLRQEII*LRSIQGAPASV
Trigger: GACAGAAGCAGGTGCTCCCTGGATTGACCTCAGTCATATAATTTCTTGTCTTAACAAGCTAGATGCTGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS CAA 90 bp GGTGTCTGTAAATTGTTTTCTGTGACTCTGTTCCACCAAACCATATaGATGGGTACTCCTGATTTACACCTGTCAGCAAGGCAGCCAATA +
Preference number: 6 (lower is better)
Translates to: GVCKLFSVTLFHQTI*MGTPDLHLSARQPI
Trigger: TATTGGCTGCCTTGCTGACAGGTGTAAATCAGGAGTACCCATCAATATGGTTTGGTGGAACAGAGTCACAGAAAACAATTTACAGACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000503791.5
CDS CAA 90 bp AGTTGTGTCTGTATAGAAGTAAGTCGTCCCACCAACAGTTTCCTTTaGGATCACCTGACCAGAAGACGGAGTCTGAGAAACAGGATTATT +
Preference number: 6 (lower is better)
Translates to: SCVCIEVSRPTNSFL*DHLTRRRSLRNRII
Trigger: AATAATCCTGTTTCTCAGACTCCGTCTTCTGGTCAGGTGATCCAAAAGGAAACTGTTGGTGGGACGACTTACTTCTATACAGACACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000483842.1
ENST00000503791.5
CDS TCA 72 bp GTTGGATCCATAACTCGACATGCCAAACCTGCTGTATaGATGGTACGCAATGCAGAACTTAGTTGGACAATA +
Preference number: 6 (lower is better)
Translates to: VGSITRHAKPAV*MVRNAELSWTI
Trigger: TATTGTCCAACTAAGTTCTGCATTGCGTACCATTCATACAGCAGGTTTGGCATGTCGAGTTATGGATCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS CAA 90 bp AAGGTGCGTTTGCTTTCGGTTGCATATAAGCAACGTGAGGTGCAGTaGGAGGATAAATATGATAGTTTGGAAACACCATTCCAGTCAAAG +
Preference number: 6 (lower is better)
Translates to: KVRLLSVAYKQREVQ*EDKYDSLETPFQSK
Trigger: CTTTGACTGGAATGGTGTTTCCAAACTATCATATTTATCCTCCAACTGCACCTCACGTTGCTTATATGCAACCGAAAGCAAACGCACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS TCA 72 bp CCAATTGAGTATAAAATCGAGCACCAATCATGGGCATaGTGTCATTTACACTTCGCATCCTGTTTTGGTCAG +
Preference number: 6 (lower is better)
Translates to: PIEYKIEHQSWA*CHLHFASCFGQ
Trigger: CTGACCAAAACAGGATGCGAAGTGTAAATGACATCATGCCCATGATTGGTGCTCGATTTTATACTCAATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS GCA 72 bp TGCGTTTGCTTTCGGTTGCATATAAGCAACGTGAGGTaGAGTTGGAGGATAAATATGATAGTTTGGAAACAC +
Preference number: 6 (lower is better)
Translates to: CVCFRLHISNVR*SWRINMIVWKH
Trigger: GTGTTTCCAAACTATCATATTTATCCTCCAACTGCACCTCACGTTGCTTATATGCAACCGAAAGCAAACGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS GCA 72 bp AGTTATCAGAATCTTTGTTGGATCCATAACTCGACATaGCAAACCTGCTGTATGAATGGTACGCAATGCAGA +
Preference number: 6 (lower is better)
Translates to: SYQNLCWIHNST*QTCCMNGTQCR
Trigger: TCTGCATTGCGTACCATTCATACAGCAGGTTTGGCATGTCGAGTTATGGATCCAACAAAGATTCTGATAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS GCA 72 bp AGAAATTATATGACTGAGGTCAATCCAGGGAGCACCTaGTTCTGTCACCTGATGAAAAAGATGATCCCTAAA +
Preference number: 6 (lower is better)
Translates to: RNYMTEVNPGST*FCHLMKKMIPK
Trigger: TTTAGGGATCATCTTTTTCATCAGGTGACAGAAGCAGGTGCTCCCTGGATTGACCTCAGTCATATAATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS CCA 72 bp TGCTTTCGGTTGCATATAAGCAACGTGAGGTGCAGTTaGAGGATAAATATGATAGTTTGGAAACACCATTCC +
Preference number: 6 (lower is better)
Translates to: CFRLHISNVRCS*RINMIVWKHHS
Trigger: GGAATGGTGTTTCCAAACTATCATATTTATCCTCCAACTGCACCTCACGTTGCTTATATGCAACCGAAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS CAA 72 bp AAATTGTTTTCTGTGACTCTGTTCCACCAAACCATATaGATGGGTACTCCTGATTTACACCTGTCAGCAAGG +
Preference number: 6 (lower is better)
Translates to: KLFSVTLFHQTI*MGTPDLHLSAR
Trigger: CCTTGCTGACAGGTGTAAATCAGGAGTACCCATCAATATGGTTTGGTGGAACAGAGTCACAGAAAACAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000503791.5
CDS CAA 90 bp AAATATGATAGTTTGGAAACACCATTCCAGTCAAAGGTGCTGGAGTaGTGTCTGTATAGAAGTAAGTCGTCCCACCAACAGTTTCCTTTT +
Preference number: 6 (lower is better)
Translates to: KYDSLETPFQSKVLE*CLYRSKSSHQQFPF
Trigger: AAAAGGAAACTGTTGGTGGGACGACTTACTTCTATACAGACACAACTCCAGCACCTTTGACTGGAATGGTGTTTCCAAACTATCATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS TCA 72 bp AGCTTTGTAGCAAGATGTAATATATCCAAAATTACTTaGTTTCTGTATCCGGTTGGGAGGTGGCAGTGGTTC +
Preference number: 6 (lower is better)
Translates to: SFVARCNISKIT*FLYPVGRWQWF
Trigger: GAACCACTGCCACCTCCCAACCGGATACAGAAATCAAGTAATTTTGGATATATTACATCTTGCTACAAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS TCA 72 bp TTCCATTTTGAACCTCCTTTGCAAGGTCTTCCTCTATaGCATCATTTCTCATTTGAGCAGCATCCAATTGAG +
Preference number: 6 (lower is better)
Translates to: FHFEPPLQGLPL*HHFSFEQHPIE
Trigger: CTCAATTGGATGCTGCTCAAATGAGAAATGATGTCATAGAGGAAGACCTTGCAAAGGAGGTTCAAAATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS CAA 72 bp TTGCTTTCGGTTGCATATAAGCAACGTGAGGTGCAGTaGGAGGATAAATATGATAGTTTGGAAACACCATTC +
Preference number: 6 (lower is better)
Translates to: LLSVAYKQREVQ*EDKYDSLETPF
Trigger: GAATGGTGTTTCCAAACTATCATATTTATCCTCCAACTGCACCTCACGTTGCTTATATGCAACCGAAAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5
CDS CAA 90 bp AAGGTCTTCCTCTATGACATCATTTCTCATTTGAGCAGCATCCAATaGAGTATAAAATCGAGCACCAATCATGGGCATGATGTCATTTAC +
Preference number: 6 (lower is better)
Translates to: KVFLYDIISHLSSIQ*SIKSSTNHGHDVIY
Trigger: GTAAATGACATCATGCCCATGATTGGTGCTCGATTTTATACTCAATTGGATGCTGCTCAAATGAGAAATGATGTCATAGAGGAAGACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS CAA 72 bp CATGGGCATGATGTCATTTACACTTCGCATCCTGTTTaGGTCAGTCAACAAATACAAAATCAGATTCTTCAG +
Preference number: 6 (lower is better)
Translates to: HGHDVIYTSHPV*VSQQIQNQILQ
Trigger: CTGAAGAATCTGATTTTGTATTTGTTGACTGACCAAAACAGGATGCGAAGTGTAAATGACATCATGCCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380958.8
ENST00000399613.1
CDS TCA 72 bp TTTAGTGGTAAATACTTCACGCAAAGTTACGATATTTaGGTGTTGAATTTTCTTCCACATGTCGACCAACAC +
Preference number: 6 (lower is better)
Translates to: FSGKYFTQSYDI*VLNFLPHVDQH
Trigger: GTGTTGGTCGACATGTGGAAGAAAATTCAACACTCAAATATCGTAACTTTGCGTGAAGTATTTACCACTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380958.8
ENST00000399613.1
ENST00000503791.5