RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PAMR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000149090

Ensembl transcript IDs: ENST00000527605.5, ENST00000529303.1, ENST00000531219.1, ENST00000534803.1, ENST00000611014.4, ENST00000615849.4, ENST00000619888.5, ENST00000621476.4, ENST00000622144.4

Found 713 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACCCTTCACTaGGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCA +
Preference number: 1 (lower is better)
Translates to: TRHQPTSNGGLLTLH*VLSLKSEALAQPSS
Trigger: TGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
3UTR TCA 90 bp CTACCAGCAATGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTaGAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCAC +
Preference number: 1 (lower is better)
Translates to: LPAMEVYSPFTEFCP*SQKPWHSQVHRPNH
Trigger: GTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCATTGCTGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
3UTR CCA 90 bp CAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATaGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGA +
Preference number: 1 (lower is better)
Translates to: QLAVLVVDAASAYQQ*RSTHPSLSFVPEVR
Trigger: TCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
3UTR CCA 90 bp AAATGTGTACAAGAGATGGGGAAGGAAAAGGACCAGACTGTACTGTaGCCATGTACACAAAGGCATGCACCACATCCCAGCTCTGCTGCC +
Preference number: 1 (lower is better)
Translates to: KCVQEMGKEKDQTVL*PCTQRHAPHPSSAA
Trigger: GGCAGCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTCTGGTCCTTTTCCTTCCCCATCTCTTGTACACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR TCA 90 bp GTTCACAGGCCAAATCACACTTCAGGCCCACACTGCTTCACGCAATaGCACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTG +
Preference number: 1 (lower is better)
Translates to: VHRPNHTSGPHCFTQ*HTYRRIYRNTSQGV
Trigger: CACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGTGATTTGGCCTGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
3UTR CCA 90 bp CAGATCTTCCCTGGTCAAGCTGATGGCATTCGTATAACTGAAAGTTaGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATG +
Preference number: 1 (lower is better)
Translates to: QIFPGQADGIRITES*GRPPGQWSGEVLYM
Trigger: CATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCCAACTTTCAGTTATACGAATGCCATCAGCTTGACCAGGGAAGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR CCA 90 bp TTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTaGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGC +
Preference number: 1 (lower is better)
Translates to: FCIWSSLKKLTSCKP*HLPIGCPSSGRGIS
Trigger: GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR CCA 90 bp GATGGCATTCGTATAACTGAAAGTTGGGGAAGACCACCAGGTCAGTaGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTAC +
Preference number: 1 (lower is better)
Translates to: DGIRITESWGRPPGQ*SGEVLYMVFFEETY
Trigger: GTAAGTTTCTTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCCAACTTTCAGTTATACGAATGCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR-3UTR TCA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCACTGAGTTTTGTCCCTaGAGTCAGAAGCCCTGGCAC +
Preference number: 2 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISTEFCP*SQKPWH
Trigger: GTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGT...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
3UTR-3UTR CCA 90 bp GACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCCAGCTCTGCTGCTCAGCCTACCAGCAATaGAGGTCTACTCACCCTTCA +
Preference number: 2 (lower is better)
Translates to: DCTVAMYTKACTTSQLCCSAYQQ*RSTHPS
Trigger: TGAAGGGTGAGTAGACCTCCATTGCTGGTAGGCTGA...GCAGCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR-3UTR TCA 90 bp ACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGACACTGCTTCACGCAATaGCACACGTACAGACGGATA +
Preference number: 2 (lower is better)
Translates to: TGSSLELESLKRGLMKPRHCFTQ*HTYRRI
Trigger: TATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTG...TCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR-3UTR TCA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCCACTGCTTCACGCAATaGCACACGTACAGACGGATA +
Preference number: 2 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGHCFTQ*HTYRRI
Trigger: TATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTG...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
3UTR-3UTR TCA 90 bp GGAAAAGGACCAGACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCCAGCTCTCTAGAACTTaGGAGCCTCAAAAGGGGCCT +
Preference number: 2 (lower is better)
Translates to: GKGPDCTVAMYTKACTTSQLSRT*EPQKGP
Trigger: AGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTG...GGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTCTGGTCCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR-3UTR TCA 90 bp GGAAAAGGACCAGACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCCACTGCTTCACGCAATaGCACACGTACAGACGGATA +
Preference number: 2 (lower is better)
Translates to: GKGPDCTVAMYTKACTTSHCFTQ*HTYRRI
Trigger: TATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTG...GGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTCTGGTCCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR-3UTR TCA 90 bp ACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGACTACTCACCCTTCACTaGGTTTTGTCCCTGAAGTCA +
Preference number: 2 (lower is better)
Translates to: TGSSLELESLKRGLMKPRLLTLH*VLSLKS
Trigger: TGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAG...TCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR-3UTR CCA 90 bp ACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGAACTTCTTGCAAGCCCTaGCATCTTCCAATTGGCTGT +
Preference number: 2 (lower is better)
Translates to: TGSSLELESLKRGLMKPRTSCKP*HLPIGC
Trigger: ACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGT...TCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR-3UTR CCA 90 bp ACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGAAGACCACCAGGTCAGTaGAGTGGAGAGGTTTTGTAT +
Preference number: 2 (lower is better)
Translates to: TGSSLELESLKRGLMKPRRPPGQ*SGEVLY
Trigger: ATACAAAACCTCTCCACTCCACTGACCTGGTGGTCT...TCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR-3UTR CCA 90 bp ACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGACGTATAACTGAAAGTTaGGGAAGACCACCAGGTCAG +
Preference number: 2 (lower is better)
Translates to: TGSSLELESLKRGLMKPRRITES*GRPPGQ
Trigger: CTGACCTGGTGGTCTTCCCCAACTTTCAGTTATACG...TCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR-3UTR CCA 90 bp GGAAAAGGACCAGACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCAGACCACCAGGTCAGTaGAGTGGAGAGGTTTTGTAT +
Preference number: 2 (lower is better)
Translates to: GKGPDCTVAMYTKACTTSRPPGQ*SGEVLY
Trigger: ATACAAAACCTCTCCACTCCACTGACCTGGTGGTCT...GGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTCTGGTCCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR-3UTR CCA 90 bp TCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGATCTTCCCTGACCAGGTCAGTGGAGTaGAGAGGTTTTGTATATGGT +
Preference number: 2 (lower is better)
Translates to: SLELESLKRGLMKPRSSLTRSVE*RGFVYG
Trigger: ACCATATACAAAACCTCTCCACTCCACTGACCTGGT...CAGGGAAGATCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR-3UTR GCA 90 bp GGAAAAGGACCAGACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCAAGAAACTTACTTCTTaGAAGCCCTGGCATCTTCCA +
Preference number: 2 (lower is better)
Translates to: GKGPDCTVAMYTKACTTSKKLTS*KPWHLP
Trigger: TGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT...GGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTCTGGTCCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR-3UTR CCA 90 bp GGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGAATCAGCCTACCAGCAATaGAGGTCTACTCACCCTTCA +
Preference number: 2 (lower is better)
Translates to: GRPPGQWSGEVLYMVFFESAYQQ*RSTHPS
Trigger: TGAAGGGTGAGTAGACCTCCATTGCTGGTAGGCTGA...TTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR CAA 90 bp GACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTaGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGC +
Preference number: 2 (lower is better)
Translates to: DHQVSGVERFCIWSS*KKLTSCKPWHLPIG
Trigger: GCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR-3UTR GCA 90 bp CTGAAAGTTGGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGAAGAAACTTACTTCTTaGAAGCCCTGGCATCTTCCA +
Preference number: 2 (lower is better)
Translates to: LKVGEDHQVSGVERFCIWKKLTS*KPWHLP
Trigger: TGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT...CCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCCAACTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR-3UTR CCA 90 bp GGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGAAACTTCTTGCAAGCCCTaGCATCTTCCAATTGGCTGT +
Preference number: 2 (lower is better)
Translates to: GRPPGQWSGEVLYMVFFETSCKP*HLPIGC
Trigger: ACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGT...TTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR CAA 90 bp ACTGAAAGTTGGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTaGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTG +
Preference number: 2 (lower is better)
Translates to: TESWGRPPGQWSGEV*YMVFFEETYFLQAL
Trigger: CAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCCAACTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR TCA 72 bp TGCCCTGGGCTGTCCCACAGGCAGCTCTCTAGAACTTaGGAGCCTCAAAAGGGGCCTCATGAAGCCCAGATC +
Preference number: 3 (lower is better)
Translates to: CPGLSHRQLSRT*EPQKGPHEAQI
Trigger: GATCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGTGGGACAGCCCAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR GCA 72 bp ATGTACACAAAGGCATGCACCACATCCCAGCTCTGCTaGCCTGGGCTGTCCCACAGGCAGCTCTCTAGAACT +
Preference number: 3 (lower is better)
Translates to: MYTKACTTSQLC*PGLSHRQLSRT
Trigger: AGTTCTAGAGAGCTGCCTGTGGGACAGCCCAGGGCAGCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR-3UTR CAA 90 bp GACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCCAGCTCTGCTGCCCTGGCATCTTCCAATaGGCTGTCCTAGTAGTGGAC +
Preference number: 3 (lower is better)
Translates to: DCTVAMYTKACTTSQLCCPGIFQ*AVLVVD
Trigger: GTCCACTACTAGGACAGCCAATTGGAAGATGCCAGG...GCAGCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR TCA 72 bp CAGCCTACCAGCAATGGAGGTCTACTCACCCTTCACTaGGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAG +
Preference number: 3 (lower is better)
Translates to: QPTSNGGLLTLH*VLSLKSEALAQ
Trigger: CTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCATTGCTGGTAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
3UTR TCA 72 bp ATGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTaGAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGG +
Preference number: 3 (lower is better)
Translates to: MEVYSPFTEFCP*SQKPWHSQVHR
Trigger: CCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
3UTR CCA 72 bp CCTGGTCAAGCTGATGGCATTCGTATAACTGAAAGTTaGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTT +
Preference number: 3 (lower is better)
Translates to: PGQADGIRITES*GRPPGQWSGEV
Trigger: AACCTCTCCACTCCACTGACCTGGTGGTCTTCCCCAACTTTCAGTTATACGAATGCCATCAGCTTGACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR-3UTR CAA 90 bp GACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCCAGCTCTGCTGCTGGAGTGGAGAGGTTTaGTATATGGTCTTCTTTGAA +
Preference number: 3 (lower is better)
Translates to: DCTVAMYTKACTTSQLCCWSGEV*YMVFFE
Trigger: TTCAAAGAAGACCATATACAAAACCTCTCCACTCCA...GCAGCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR CCA 72 bp TGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTaGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGC +
Preference number: 3 (lower is better)
Translates to: WSSLKKLTSCKP*HLPIGCPSSGR
Trigger: GCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR CCA 72 bp CGTATAACTGAAAGTTGGGGAAGACCACCAGGTCAGTaGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGAA +
Preference number: 3 (lower is better)
Translates to: RITESWGRPPGQ*SGEVLYMVFFE
Trigger: TTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCCAACTTTCAGTTATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACGCGAGTCCACCACACTaGCCACCCCAGAGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHASPPH*PPQSAV
Trigger: CACTGCGCTCTGGGGTGGTCAGTGTGGTGGACTCGC...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCCCCGCGGACGGCGGCTaGAAAGGAAGCTGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: HPSLSFVPEVRSPGTAKFPADGG*KGSCGG
Trigger: TCCCCCGCAGCTTCCTTTGCAGCCGCCGTCCGCGGG...GAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS-3UTR GCA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCTGCTGCCTTAACCCTTaGGGGGCCCCGGGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISCCLNP*GAPGGV
Trigger: CACACCTCCCGGGGCCCCGCAAGGGTTAAGGCAGCA...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS-3UTR TCA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCAGCGAGTCCACCACACTaGCCACCCCAGAGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: LLASPGIFQLAVLVVDAAASPPH*PPQSAV
Trigger: CACTGCGCTCTGGGGTGGTCAGTGTGGTGGACTCGC...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACAGGGATGCAGGATGGTaGCCGCCCACTCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHRDAGW*PPTPLP
Trigger: GGGAAGTGGAGTGGGCGGGCACCATCCTGCATCCCT...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACCTCCCTTGTGTAGGCTaGCGTCATGCACCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHLPCVG*RHAPRW
Trigger: CCAGCGGGGTGCATGACGGCAGCCTACACAAGGGAG...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCCTCCCTTGTGTAGGCTaGCGTCATGCACCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PIGCPSSGRGISLPAMEVLPCVG*RHAPRW
Trigger: CCAGCGGGGTGCATGACGGCAGCCTACACAAGGGAG...GACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp GACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCCAGCTCTGCTGCTGCCCGAGCGTCTACTaGGGAGGGAGAGGAGGGACC +
Preference number: 4 (lower is better)
Translates to: DCTVAMYTKACTTSQLCCCPSVY*GGRGGT
Trigger: GGTCCCTCCTCTCCCTCCCCAGTAGACGCTCGGGCA...GCAGCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS-3UTR CCA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCGCGAGGCAGATGGGCTaGACTCGGGTGCTGATACGG +
Preference number: 4 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISARQMG*TRVLIR
Trigger: CCGTATCAGCACCCGAGTCCAGCCCATCTGCCTCGC...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACCCTGGAAGGAAGTGCTaGGATCCCGACTGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHPGRKC*DPDWQR
Trigger: TCGCTGCCAGTCGGGATCTCAGCACTTCCTTCCAGG...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACTCCAGCCAGCCACAGTaGTGTGGGACTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHSSQPQ*CGTPGR
Trigger: CCTTCCAGGAGTCCCACATCACTGTGGCTGGCTGGA...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp CACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCGCGAGTCCACCACACTaGCCACCCCAGAGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: HPSLSFVPEVRSPGTAKFASPPH*PPQSAV
Trigger: CACTGCGCTCTGGGGTGGTCAGTGTGGTGGACTCGC...GAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACAACCCAGCTCCATCCTTaGCGCGGCTGGTGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITTQLHP*RGWCPS
Trigger: GCTCGGGCACCAGCCGCGGCAAGGATGGAGCTGGGT...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACCCTGGCCACATCGCATaGAGTCTCCTCCGTACCAGC +
Preference number: 4 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHPGHIA*SLLRTS
Trigger: GCTGGTACGGAGGAGACTGCATGCGATGTGGCCAGG...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCCTGGCCACATCGCATaGAGTCTCCTCCGTACCAGC +
Preference number: 4 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISPGHIA*SLLRTS
Trigger: GCTGGTACGGAGGAGACTGCATGCGATGTGGCCAGG...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp AAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTAAGGGATGCAGGATGGTaGCCGCCCACTCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: KPWHLPIGCPSSGRGISLRDAGW*PPTPLP
Trigger: GGGAAGTGGAGTGGGCGGGCACCATCCTGCATCCCT...TAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCCAGCTCTGCTGCCCTCCTGTAGATGGCTaGCTGCCACGGCCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: DCTVAMYTKACTTSQLCCPPVDG*LPRPAQ
Trigger: TTGCGCTGGCCGTGGCAGGCAGCCATCTACAGGAGG...GCAGCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCAGGGCTCCTCACGTCTaGCAGGACATTCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISRAPHV*QDIPAS
Trigger: GCTGGCTGGAATGTCCTGGCAGACGTGAGGAGCCCT...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp AAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTAGCGTGGCTCAGGAGATaGTCGTCCCGGGAAGGACAC +
Preference number: 4 (lower is better)
Translates to: KPWHLPIGCPSSGRGISLAWLRR*SSREGH
Trigger: GTGTCCTTCCCGGGACGAGCATCTCCTGAGCCACGC...TAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCCGTCATGCACCCCGCTaGTCCTCCTGTAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: PIGCPSSGRGISLPAMEVRHAPR*SSCRWL
Trigger: CAGCCATCTACAGGAGGACCAGCGGGGTGCATGACG...GACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCGTCATGCACCCCGCTaGTCCTCCTGTAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISRHAPR*SSCRWL
Trigger: CAGCCATCTACAGGAGGACCAGCGGGGTGCATGACG...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp GACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCCAGCTCTGCTGCGCGAGGCAGATGGGCTaGACTCGGGTGCTGATACGG +
Preference number: 4 (lower is better)
Translates to: DCTVAMYTKACTTSQLCCARQMG*TRVLIR
Trigger: CCGTATCAGCACCCGAGTCCAGCCCATCTGCCTCGC...GCAGCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACATCCCCGAGCCCCAGCTaGGCGGGAGCTCGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTSPSPS*AGARVS
Trigger: TGAAACCCGAGCTCCCGCTCAGCTGGGGCTCGGGGA...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS-3UTR TCA 90 bp AAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTAGCTGGACTCGGGTGCTaGTACGGGCCTTGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: KPWHLPIGCPSSGRGISLAGLGC*YGPCLG
Trigger: TCCTAGACAAGGCCCGTATCAGCACCCGAGTCCAGC...TAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCACCTGGAAGGAAGTGCTaGGATCCCGACTGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: LLASPGIFQLAVLVVDAAPGRKC*DPDWQR
Trigger: TCGCTGCCAGTCGGGATCTCAGCACTTCCTTCCAGG...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CTGAAAGTTGGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGCCTTGCCGCGGCTGGTaGCCGAGCGTCTACTGGGGA +
Preference number: 4 (lower is better)
Translates to: LKVGEDHQVSGVERFCIWPCRGW*PSVYWG
Trigger: TCCCCAGTAGACGCTCGGGCACCAGCCGCGGCAAGG...CCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCCAACTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615849.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGCCTTGCCGCGGCTGGTaGCCGAGCGTCTACTGGGGA +
Preference number: 4 (lower is better)
Translates to: GEDHQVSGVERFCIWSSLPCRGW*PSVYWG
Trigger: TCCCCAGTAGACGCTCGGGCACCAGCCGCGGCAAGG...CAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615849.4
ENST00000622144.4
CDS-3UTR GCA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACAACCCAGCTCCATCCTTaGCGCGGCTGGTGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTTQLHP*RGWCPS
Trigger: GCTCGGGCACCAGCCGCGGCAAGGATGGAGCTGGGT...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp CCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCGCCTGCTCGGCACTCTaGACAGTAGAACCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: PIGCPSSGRGISLPAMEVACSAL*TVEPLH
Trigger: GTGAAGGGGTTCTACTGTGCAGAGTGCCGAGCAGGC...GACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCATGTCCTCCTGCTGCTaGCCAGGCGGCGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: SLSFVPEVRSPGTAKFTGMSSCC*PGGGRR
Trigger: CCTTCTACCGCCGCCTGGGCAGCAGCAGGAGGACAT...GCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TGTCCCACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGATGTCCTCCTGCTGCTaGCCAGGCGGCGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: CPTGSSLELESLKRGLMKMSSCC*PGGGRR
Trigger: CCTTCTACCGCCGCCTGGGCAGCAGCAGGAGGACAT...CTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGTGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp CACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCGACATGTCCTCCTGCTaGTGCCCAGGCGGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: HPSLSFVPEVRSPGTAKFDMSSC*CPGGGR
Trigger: TCTACCGCCGCCTGGGCAGCAGCAGGAGGACATGTC...GAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAAGGGATGCAGGATGGTaGCCGCCCACTCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQRDAGW*PPTPLP
Trigger: GGGAAGTGGAGTGGGCGGGCACCATCCTGCATCCCT...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCCTCCTGTAGATGGCTaGCTGCCACGGCCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: SLSFVPEVRSPGTAKFTGPPVDG*LPRPAQ
Trigger: TTGCGCTGGCCGTGGCAGGCAGCCATCTACAGGAGG...GCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAATGTAGGCTGCCGTCATaGACCCCGCTGGTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQCRLPS*TPLVLL
Trigger: CAGGAGGACCAGCGGGGTGCATGACGGCAGCCTACA...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGTGTAGGCTGCCGTCATaGACCCCGCTGGTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWCRLPS*TPLVLL
Trigger: CAGGAGGACCAGCGGGGTGCATGACGGCAGCCTACA...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCCAGCTCTGCTGCCAGCCACCACCACAGTaGGCTCATTCACCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: DCTVAMYTKACTTSQLCCQPPPQ*AHSPGH
Trigger: GTGCCCTGGTGAATGAGCGCACTGTGGTGGTGGCTG...GCAGCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCAAGGGCTCCTCACGTCTaGCAGGACATTCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLASPGIFQLAVLVVDAARAPHV*QDIPAS
Trigger: GCTGGCTGGAATGTCCTGGCAGACGTGAGGAGCCCT...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp AAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTAAGGACACAGCCGCGATaGCTCCTGTCTCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: KPWHLPIGCPSSGRGISLRTQPR*LLSLQC
Trigger: GCACTGCAGAGACAGGAGGCATCGCGGCTGTGTCCT...TAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAGCGTGGCTCAGGAGATaGTCGTCCCGGGAAGGACAC +
Preference number: 4 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQAWLRR*SSREGH
Trigger: GTGTCCTTCCCGGGACGAGCATCTCCTGAGCCACGC...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACCCAGGGCTTTTTCAGTaGCACCAGGGAGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHPGLFQ*HQGGWL
Trigger: CAACCAGCCTCCCTGGTGGCACTGAAAAAGCCCTGG...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS-3UTR GCA 90 bp AAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTAACCTCTCCTCTCTGCTaGCTTAACCCTTGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: KPWHLPIGCPSSGRGISLTSPLC*LNPCGA
Trigger: GGCCCCGCAAGGGTTAAGGCAGCAGAGAGGAGAGGT...TAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS-3UTR CCA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCGAGGATCCTATGCTCTaGATAGGAGCTGGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISEDPML*IGAGRS
Trigger: CGAGCGGCCAGCTCCTATCCAGAGCATAGGATCCTC...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCGGCCAGCGCAACCCTTaGGTCTTTGGAGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISGQRNP*VFGAVM
Trigger: CATCACTGCTCCAAAGACCCAAGGGTTGCGCTGGCC...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCTGGTCCTCCTGTAGATaGCTGCCTGCCACGGCCAGC +
Preference number: 4 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGWSSCR*LPATAS
Trigger: GCTGGCCGTGGCAGGCAGCCATCTACAGGAGGACCA...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp AAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACGTCATGCACCCCGCTaGTCCTCCTGTAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: KPWHLPIGCPSSGRGISLRHAPR*SSCRWL
Trigger: CAGCCATCTACAGGAGGACCAGCGGGGTGCATGACG...TAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAGCGAGGCAGATGGGCTaGACTCGGGTGCTGATACGG +
Preference number: 4 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQARQMG*TRVLIR
Trigger: CCGTATCAGCACCCGAGTCCAGCCCATCTGCCTCGC...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAACAGCCTGGGTACAGGTaGGGTCCCAGTGTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQQPGYR*GPSVGC
Trigger: GCACCCAACACTGGGACCCCACCTGTACCCAGGCTG...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS-3UTR CCA 90 bp AGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGAGGTGTGGCCACGCCTaGAGACCCGCGGACGGCGGC +
Preference number: 4 (lower is better)
Translates to: RNLLLASPGIFQLAVLVVRCGHA*RPADGG
Trigger: GCCGCCGTCCGCGGGTCTCCAGGCGTGGCCACACCT...CACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS-3UTR TCA 90 bp AAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTAGCGGCGGTAGAAGGGTaGGATGCACTCATACTGGAG +
Preference number: 4 (lower is better)
Translates to: KPWHLPIGCPSSGRGISLAAVEG*DALILE
Trigger: CTCCAGTATGAGTGCATCTCACCCTTCTACCGCCGC...TAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp TGTCCCACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGGCTGGACTCGGGTGCTaGTACGGGCCTTGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: CPTGSSLELESLKRGLMKAGLGC*YGPCLG
Trigger: TCCTAGACAAGGCCCGTATCAGCACCCGAGTCCAGC...CTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGTGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp AAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTAGCAGTGTGTCGTTCTTaGAGCCAGGGCTCCTCACGT +
Preference number: 4 (lower is better)
Translates to: KPWHLPIGCPSSGRGISLAVCRS*SQGSSR
Trigger: ACGTGAGGAGCCCTGGCTTCAAGAACGACACACTGC...TAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCAGCAGTGTGTCGTTCTTaGAGCCAGGGCTCCTCACGT +
Preference number: 4 (lower is better)
Translates to: LLASPGIFQLAVLVVDAAAVCRS*SQGSSR
Trigger: ACGTGAGGAGCCCTGGCTTCAAGAACGACACACTGC...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCCTCCGTACCAGCCTaGTCGGCACTCTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: LLASPGIFQLAVLVVDAASSVPA*SALCTV
Trigger: TACTGTGCAGAGTGCCGAGCAGGCTGGTACGGAGGA...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp AGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGACATGTCCTCCTGCTaGTGCCCAGGCGGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: RSTHPSLSFVPEVRSPGTDMSSC*CPGGGR
Trigger: TCTACCGCCGCCTGGGCAGCAGCAGGAGGACATGTC...TGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp AGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAAGGGATGCAGGATGGTaGCCGCCCACTCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: RSTHPSLSFVPEVRSPGTRDAGW*PPTPLP
Trigger: GGGAAGTGGAGTGGGCGGGCACCATCCTGCATCCCT...TGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACACCTCCTGTAGATGGCTaGCTGCCACGGCCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITPPVDG*LPRPAQ
Trigger: TTGCGCTGGCCGTGGCAGGCAGCCATCTACAGGAGG...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACATGTAGGCTGCCGTCATaGACCCCGCTGGTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITCRLPS*TPLVLL
Trigger: CAGGAGGACCAGCGGGGTGCATGACGGCAGCCTACA...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp AGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACACTCCCTTGTGTAGGCTaGCGTCATGCACCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: RSTHPSLSFVPEVRSPGTLPCVG*RHAPRW
Trigger: CCAGCGGGGTGCATGACGGCAGCCTACACAAGGGAG...TGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp ACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGATCACCAGGGCACCGCTaGAGACTAGGAACCACGCTC +
Preference number: 4 (lower is better)
Translates to: TGSSLELESLKRGLMKPRSPGHR*RLGTTL
Trigger: GAGCGTGGTTCCTAGTCTGCAGCGGTGCCCTGGTGA...TCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCTCACCAGGGCACCGCTaGAGACTAGGAACCACGCTC +
Preference number: 4 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGSPGHR*RLGTTL
Trigger: GAGCGTGGTTCCTAGTCTGCAGCGGTGCCCTGGTGA...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGTCACCAGGGCACCGCTaGAGACTAGGAACCACGCTC +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWSPGHR*RLGTTL
Trigger: GAGCGTGGTTCCTAGTCTGCAGCGGTGCCCTGGTGA...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCATGCCATGGTCCTCATaGTGCTCCTCACACAGCAGC +
Preference number: 4 (lower is better)
Translates to: PIGCPSSGRGISLPAMEVMPWSS*CSSHSS
Trigger: GCTGCTGTGTGAGGAGCAGCATGAGGACCATGGCAT...GACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GGAAAAGGACCAGACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCACCACATCCCAGCTCTaGTGCCCTGGGCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: GKGPDCTVAMYTKACTTSTTSQL*CPGLSH
Trigger: GTGGGACAGCCCAGGGCAGCAGAGCTGGGATGTGGT...GGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTCTGGTCCTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACACATCCTTGCCGCGGCTaGTGCCCGAGCGTCTACTGG +
Preference number: 4 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTHPCRG*CPSVYW
Trigger: CCAGTAGACGCTCGGGCACCAGCCGCGGCAAGGATG...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615849.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCGGGGCTCGCAGAACCTaGCCACATCGCATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGGARRT*PHRMQS
Trigger: AGACTGCATGCGATGTGGCCAGGTTCTGCGAGCCCC...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAGCTCTGGATAGGAGCTaGCCGCTCGTTGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQALDRS*PLVATD
Trigger: GTCTGTGGCAACGAGCGGCCAGCTCCTATCCAGAGC...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACACGCACGTGCCGTCATaGAAACAAGGGGATGAGGAG +
Preference number: 4 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHTHVPS*KQGDEE
Trigger: CTCCTCATCCCCTTGTTTCCATGACGGCACGTGCGT...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCTCCAAAGGGAAGGGCTaGCTTCTTGGTAGGGGCACT +
Preference number: 4 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISSKGKG*LLGRGT
Trigger: AGTGCCCCTACCAAGAAGCCAGCCCTTCCCTTTGGA...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCGTCATGCACCCCGCTaGTCCTCCTGTAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: SLSFVPEVRSPGTAKFTGRHAPR*SSCRWL
Trigger: CAGCCATCTACAGGAGGACCAGCGGGGTGCATGACG...GCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp TGTCCCACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGGGAGCTGAAGAAAAGTaGGCCCCAACTGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: CPTGSSLELESLKRGLMKGAEEK*APTASS
Trigger: GCTGGACGCAGTTGGGGCTCACTTTTCTTCAGCTCC...CTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGTGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp GACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCCAGCTCTGCTGCTGGGCCCCCAGGGTCTaGGCAGTTTCTTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: DCTVAMYTKACTTSQLCCWAPRV*AVSFFK
Trigger: CTTGAAGAAAGAAACTGCTCAGACCCTGGGGGCCCA...GCAGCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGTTTTCTGGTACCCATTaGCTGGGCCCCCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWFSGTH*LGPQGL
Trigger: CAGACCCTGGGGGCCCAGTCAATGGGTACCAGAAAA...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCGCGGCGGTAGAAGGGTaGGATGCACTCATACTGGAG +
Preference number: 4 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGAAVEG*DALILE
Trigger: CTCCAGTATGAGTGCATCTCACCCTTCTACCGCCGC...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp TCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCGCGGCGGTAGAAGGGTaGGATGCACTCATACTGGAG +
Preference number: 4 (lower is better)
Translates to: SLSFVPEVRSPGTAKFTGAAVEG*DALILE
Trigger: CTCCAGTATGAGTGCATCTCACCCTTCTACCGCCGC...GCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp CACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCGCAGTGTGTCGTTCTTaGAGCCAGGGCTCCTCACGT +
Preference number: 4 (lower is better)
Translates to: HPSLSFVPEVRSPGTAKFAVCRS*SQGSSR
Trigger: ACGTGAGGAGCCCTGGCTTCAAGAACGACACACTGC...GAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCTATCATAGCTCCAGCTaGCCAGTCCCATCAGATGCC +
Preference number: 4 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISYHSSS*PVPSDA
Trigger: GGCATCTGATGGGACTGGTCAGCTGGAGCTATGATA...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAAAGGCAGCACCTTGGTaGAGGCAGTGGAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQKAAPW*RQWRAC
Trigger: ACAGGCTCTCCACTGCCTTCACCAAGGTGCTGCCTT...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACCAGCTCTCTAGAACTTaGGAGCCTCAAAAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHQLSRT*EPQKGP
Trigger: AGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTG...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp CTGAAAGTTGGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGCTTCCTACGGGAGGCTaGGACGGGAGCTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: LKVGEDHQVSGVERFCIWLPTGG*DGSWLC
Trigger: GCAAAGCCAGCTCCCGTCTCAGCCTCCCGTAGGAAG...CCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCCAACTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS-3UTR GCA 90 bp CACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCAAAGTGAGCCCCAACTaGGTCCAGCAACCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HPSLSFVPEVRSPGTAKFKVSPN*VQQPSS
Trigger: GGAGCTGGGTTGCTGGACGCAGTTGGGGCTCACTTT...GAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGGCCTGCTCGGCACTCTaGACAGTAGAACCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWACSAL*TVEPLH
Trigger: GTGAAGGGGTTCTACTGTGCAGAGTGCCGAGCAGGC...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCGCCTGCTCGGCACTCTaGACAGTAGAACCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGACSAL*TVEPLH
Trigger: GTGAAGGGGTTCTACTGTGCAGAGTGCCGAGCAGGC...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TGTCCCACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGGCCTGCTCGGCACTCTaGACAGTAGAACCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: CPTGSSLELESLKRGLMKACSAL*TVEPLH
Trigger: GTGAAGGGGTTCTACTGTGCAGAGTGCCGAGCAGGC...CTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGTGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCTCCTCCGTACCAGCCTaGTCGGCACTCTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGSSVPA*SALCTV
Trigger: TACTGTGCAGAGTGCCGAGCAGGCTGGTACGGAGGA...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GGAAAAGGACCAGACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCCCTGGCCACATCGCATaGAGTCTCCTCCGTACCAGC +
Preference number: 4 (lower is better)
Translates to: GKGPDCTVAMYTKACTTSPGHIA*SLLRTS
Trigger: GCTGGTACGGAGGAGACTGCATGCGATGTGGCCAGG...GGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTCTGGTCCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCAGCACTCTGCAGTTTCTaGTTGCTGAAGGCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: LLASPGIFQLAVLVVDAAALCSF*LLKAAE
Trigger: CTCAGCGGCCTTCAGCAAGCAGAAACTGCAGAGTGC...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACAATGTCCTCCTGCTGCTaGCCAGGCGGCGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTMSSCC*PGGGRR
Trigger: CCTTCTACCGCCGCCTGGGCAGCAGCAGGAGGACAT...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACACCTCCTGTAGATGGCTaGCTGCCACGGCCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTPPVDG*LPRPAQ
Trigger: TTGCGCTGGCCGTGGCAGGCAGCCATCTACAGGAGG...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CTGAAAGTTGGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGCTCCCTTGTGTAGGCTaGCGTCATGCACCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LKVGEDHQVSGVERFCIWLPCVG*RHAPRW
Trigger: CCAGCGGGGTGCATGACGGCAGCCTACACAAGGGAG...CCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCCAACTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp AGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACACAGCCACCACCACAGTaGGCTCATTCACCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: RSTHPSLSFVPEVRSPGTQPPPQ*AHSPGH
Trigger: GTGCCCTGGTGAATGAGCGCACTGTGGTGGTGGCTG...TGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACAAGGACACAGCCGCGATaGCTCCTGTCTCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITRTQPR*LLSLQC
Trigger: GCACTGCAGAGACAGGAGGCATCGCGGCTGTGTCCT...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACAGCGTGGCTCAGGAGATaGTCGTCCCGGGAAGGACAC +
Preference number: 4 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTAWLRR*SSREGH
Trigger: GTGTCCTTCCCGGGACGAGCATCTCCTGAGCCACGC...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGGCGTGGCTCAGGAGATaGTCGTCCCGGGAAGGACAC +
Preference number: 4 (lower is better)
Translates to: GEDHQVSGVERFCIWSSLAWLRR*SSREGH
Trigger: GTGTCCTTCCCGGGACGAGCATCTCCTGAGCCACGC...CAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp TCACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATAACCACATCCCAGCTCTaGTGCCCTGGGCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SHFRPTLLHAMTHVQTDITTSQL*CPGLSH
Trigger: GTGGGACAGCCCAGGGCAGCAGAGCTGGGATGTGGT...TATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp GGAAAAGGACCAGACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCGGGGCTCGCAGAACCTaGCCACATCGCATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: GKGPDCTVAMYTKACTTSGARRT*PHRMQS
Trigger: AGACTGCATGCGATGTGGCCAGGTTCTGCGAGCCCC...GGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTCTGGTCCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp GACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCCAGCTCTGCTGCCAAAATCTGACCCTTTaGGGCTCGCAGAACCTGGCC +
Preference number: 4 (lower is better)
Translates to: DCTVAMYTKACTTSQLCCQNLTL*GSQNLA
Trigger: GGCCAGGTTCTGCGAGCCCCAAAGGGTCAGATTTTG...GCAGCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp CCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCACACGCTTGATGATCTaGCCATCGCGGTTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PIGCPSSGRGISLPAMEVTRLMI*PSRLSP
Trigger: TGGAGACAACCGCGATGGCCAGATCATCAAGCGTGT...GACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp AGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCTCTGGATAGGAGCTaGCCGCTCGTTGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: RSTHPSLSFVPEVRSPGTALDRS*PLVATD
Trigger: GTCTGTGGCAACGAGCGGCCAGCTCCTATCCAGAGC...TGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp GGAAAAGGACCAGACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCGCTCTGGATAGGAGCTaGCCGCTCGTTGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: GKGPDCTVAMYTKACTTSALDRS*PLVATD
Trigger: GTCTGTGGCAACGAGCGGCCAGCTCCTATCCAGAGC...GGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTCTGGTCCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp TGTCCCACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGGAGGATCCTATGCTCTaGATAGGAGCTGGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: CPTGSSLELESLKRGLMKEDPML*IGAGRS
Trigger: CGAGCGGCCAGCTCCTATCCAGAGCATAGGATCCTC...CTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGTGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACGAGTGGAAGAGGACGTaGAGTGAGGATCCTATGCTC +
Preference number: 4 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHEWKRT*SEDPML
Trigger: GAGCATAGGATCCTCACTCCACGTCCTCTTCCACTC...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACCCCCCTGTTATTTTCTaGTACCCATTGACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHPPVIF*YPLTGP
Trigger: GGGCCCAGTCAATGGGTACCAGAAAATAACAGGGGG...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCCAAAGGGAAGGGCTaGCTTCTTGGTAGGGGCACT +
Preference number: 4 (lower is better)
Translates to: LLASPGIFQLAVLVVDAASKGKG*LLGRGT
Trigger: AGTGCCCCTACCAAGAAGCCAGCCCTTCCCTTTGGA...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TCACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATATGGTCCTCCTGTAGATaGCTGCCTGCCACGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SHFRPTLLHAMTHVQTDIWSSCR*LPATAS
Trigger: GCTGGCCGTGGCAGGCAGCCATCTACAGGAGGACCA...TATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGCATCAGATGCCAGCGTaGCTCAGGAGATGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWHQMPA*LRRCSS
Trigger: GGACGAGCATCTCCTGAGCCACGCTGGCATCTGATG...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGGGGGCCATAGGACCCTaGGCGGGAGCAGAGGTACCC +
Preference number: 4 (lower is better)
Translates to: RNDTRTDGYTETLLKECMGAIGP*AGAEVP
Trigger: GGGTACCTCTGCTCCCGCCCAGGGTCCTATGGCCCC...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS-3UTR TCA 90 bp TCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGATCTTCCCTGGGAGCTGAAGAAAAGTaGGCCCCAACTGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SLELESLKRGLMKPRSSLGAEEK*APTASS
Trigger: GCTGGACGCAGTTGGGGCTCACTTTTCTTCAGCTCC...CAGGGAAGATCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp CCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCATGGAAACAAGGGGATaGGGAGCATGCTGTGATCTC +
Preference number: 4 (lower is better)
Translates to: PIGCPSSGRGISLPAMEVMETRG*GACCDL
Trigger: GAGATCACAGCATGCTCCTCATCCCCTTGTTTCCAT...GACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp ACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGATGGGCCCCCAGGGTCTaGGCAGTTTCTTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: TGSSLELESLKRGLMKPRWAPRV*AVSFFK
Trigger: CTTGAAGAAAGAAACTGCTCAGACCCTGGGGGCCCA...TCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp TCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGATCTTCCCTGTTTTCTGGTACCCATTaGCTGGGCCCCCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SLELESLKRGLMKPRSSLFSGTH*LGPQGL
Trigger: CAGACCCTGGGGGCCCAGTCAATGGGTACCAGAAAA...CAGGGAAGATCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCAGGTGTCTCCCTTGACTaGACCTGCATCGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: LLASPGIFQLAVLVVDAAGVSLD*TCIGRT
Trigger: AGTTCTTCCGATGCAGGTTCAGTCAAGGGAGACACC...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp GGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGCCTGGAAGGAAGTGCTaGGATCCCGACTGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: GEDHQVSGVERFCIWSSLPGRKC*DPDWQR
Trigger: TCGCTGCCAGTCGGGATCTCAGCACTTCCTTCCAGG...CAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp GGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGAAGCGAGTCCACCACACTaGCCACCCCAGAGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: GRPPGQWSGEVLYMVFFEASPPH*PPQSAV
Trigger: CACTGCGCTCTGGGGTGGTCAGTGTGGTGGACTCGC...TTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATATCATAGCTCCAGCTaGCCAGTCCCATCAGATGCC +
Preference number: 4 (lower is better)
Translates to: LLASPGIFQLAVLVVDAAYHSSS*PVPSDA
Trigger: GGCATCTGATGGGACTGGTCAGCTGGAGCTATGATA...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp TCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGATCTTCCCTGAAGGCAGCACCTTGGTaGAGGCAGTGGAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: SLELESLKRGLMKPRSSLKAAPW*RQWRAC
Trigger: ACAGGCTCTCCACTGCCTTCACCAAGGTGCTGCCTT...CAGGGAAGATCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCAGAGGCTGGTTGCATGTaGATCCACAGGGAGAAACAG +
Preference number: 4 (lower is better)
Translates to: LLASPGIFQLAVLVVDAAEAGCM*IHREKQ
Trigger: CTGTTTCTCCCTGTGGATTCACATGCAACCAGCCTC...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS-3UTR GCA 90 bp CTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTACCCAGCTCCATCCTTaGCGCGGCTGGTGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: LHAMTHVQTDIQKHFSRSTQLHP*RGWCPS
Trigger: GCTCGGGCACCAGCCGCGGCAAGGATGGAGCTGGGT...ACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp TCACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACCTGGCCACATCGCATaGAGTCTCCTCCGTACCAGC +
Preference number: 4 (lower is better)
Translates to: SHFRPTLLHAMTHVQTDIPGHIA*SLLRTS
Trigger: GCTGGTACGGAGGAGACTGCATGCGATGTGGCCAGG...TATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGTGTCAAGGACGCACGTaGCGTCATGGAAACAAGGGG +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWCQGRT*RHGNKG
Trigger: CCCCTTGTTTCCATGACGGCACGTGCGTCCTTGACA...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCTGTCAAGGACGCACGTaGCGTCATGGAAACAAGGGG +
Preference number: 4 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGCQGRT*RHGNKG
Trigger: CCCCTTGTTTCCATGACGGCACGTGCGTCCTTGACA...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp AAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACTGCCCAGTATAGCCTaGCAAGCAGGCACACTTGTA +
Preference number: 4 (lower is better)
Translates to: KPWHLPIGCPSSGRGISLLPSIA*QAGTLV
Trigger: TACAAGTGTGCCTGCTTGGCAGGCTATACTGGGCAG...TAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAGCACTCTGCAGTTTCTaGTTGCTGAAGGCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQALCSF*LLKAAE
Trigger: CTCAGCGGCCTTCAGCAAGCAGAAACTGCAGAGTGC...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACTTGGTAGGGGCACTCTaGAGTTTCTGCTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHLVGAL*SFCLLK
Trigger: CTTCAGCAAGCAGAAACTGCAGAGTGCCCCTACCAA...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGAGGGCTCCTCACGTCTaGCAGGACATTCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GEDHQVSGVERFCIWSSLRAPHV*QDIPAS
Trigger: GCTGGCTGGAATGTCCTGGCAGACGTGAGGAGCCCT...CAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCGATGCCTCCTGTCTCTaGAGTGCAGATATCAGAAGG +
Preference number: 4 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISDASCL*SADIRR
Trigger: CCTTCTGATATCTGCACTGCAGAGACAGGAGGCATC...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGAGGACACAGCCGCGATaGCTCCTGTCTCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GEDHQVSGVERFCIWSSLRTQPR*LLSLQC
Trigger: GCACTGCAGAGACAGGAGGCATCGCGGCTGTGTCCT...CAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACATGTACACAAAGGCATaGACCACATCCCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHMYTKA*TTSQLC
Trigger: GCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACAT...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCCCTTCCACTGGAGCCTaGTGTAACTGGCCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGPSTGA*CNWPLH
Trigger: ATGAAGGGGCCAGTTACAGCAGGCTCCAGTGGAAGG...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS-3UTR CCA 90 bp GACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCCAGCTCTGCTGCATGGTACAACCTGGGTaGATCAGGCAGGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: DCTVAMYTKACTTSQLCCMVQPG*IRQESH
Trigger: GTGTGACTCCTGCCTGATCCACCCAGGTTGTACCAT...GCAGCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCCAAAATCTGACCCTTTaGGGCTCGCAGAACCTGGCC +
Preference number: 4 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGQNLTL*GSQNLA
Trigger: GGCCAGGTTCTGCGAGCCCCAAAGGGTCAGATTTTG...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCTTGGAGCCATCGGAGTaGAAGAGGACGTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: HPSLSFVPEVRSPGTAKFLEPSE*KRTWSE
Trigger: CTCACTCCACGTCCTCTTCCACTCCGATGGCTCCAA...GAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp ACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGATTGGAGCCATCGGAGTaGAAGAGGACGTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: TGSSLELESLKRGLMKPRLEPSE*KRTWSE
Trigger: CTCACTCCACGTCCTCTTCCACTCCGATGGCTCCAA...TCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp TCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCACGCACGTGCCGTCATaGAAACAAGGGGATGAGGAG +
Preference number: 4 (lower is better)
Translates to: SLSFVPEVRSPGTAKFTGTHVPS*KQGDEE
Trigger: CTCCTCATCCCCTTGTTTCCATGACGGCACGTGCGT...GCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TGTCCCACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGACGCACGTGCCGTCATaGAAACAAGGGGATGAGGAG +
Preference number: 4 (lower is better)
Translates to: CPTGSSLELESLKRGLMKTHVPS*KQGDEE
Trigger: CTCCTCATCCCCTTGTTTCCATGACGGCACGTGCGT...CTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGTGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCACCCCCTGTTATTTTCTaGTACCCATTGACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LLASPGIFQLAVLVVDAAPPVIF*YPLTGP
Trigger: GGGCCCAGTCAATGGGTACCAGAAAATAACAGGGGG...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp AAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCCCCTGTTATTTTCTaGTACCCATTGACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: KPWHLPIGCPSSGRGISLPPVIF*YPLTGP
Trigger: GGGCCCAGTCAATGGGTACCAGAAAATAACAGGGGG...TAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACAGATAGGGATGCAGGATaGTGCCCGCCCACTCCACTT +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITDRDAG*CPPTPL
Trigger: AAGTGGAGTGGGCGGGCACCATCCTGCATCCCTATC...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACCAGCATCAAGCAGGATaGGGTCATAGTTGGGATGCA +
Preference number: 4 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHQHQAG*GHSWDA
Trigger: TGCATCCCAACTATGACCCCATCCTGCTTGATGCTG...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTAGGAGCTTCAGGATaGCGATGTCAGCATCAAGCA +
Preference number: 4 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISLGASG*RCQHQA
Trigger: TGCTTGATGCTGACATCGCCATCCTGAAGCTCCTAG...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCAGCCAAGGCCAGAGATaGAGAAGGGCAGGATTGTGG +
Preference number: 4 (lower is better)
Translates to: HPSLSFVPEVRSPGTAKFSQGQR*RRAGLW
Trigger: CCACAATCCTGCCCTTCTCCATCTCTGGCCTTGGCT...GAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS-3UTR TCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGCACTCCCGACACATaGTATTCCACTCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWSTPDT*YSTLLQ
Trigger: CTGGAGCAGAGTGGAATATCATGTGTCGGGAGTGCT...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp CACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCAGCACTCCCGACACATaGTATTCCACTCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: HPSLSFVPEVRSPGTAKFSTPDT*YSTLLQ
Trigger: CTGGAGCAGAGTGGAATATCATGTGTCGGGAGTGCT...GAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAGAAGAGGACGTGGAGTaGGGATCCTATGCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQEEDVE*GSYALD
Trigger: ATCCAGAGCATAGGATCCTCACTCCACGTCCTCTTC...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCAATGGAAACAAGGGGATaGGGAGCATGCTGTGATCTC +
Preference number: 4 (lower is better)
Translates to: LLASPGIFQLAVLVVDAAMETRG*GACCDL
Trigger: GAGATCACAGCATGCTCCTCATCCCCTTGTTTCCAT...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp TCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCGGTGTCTCCCTTGACTaGACCTGCATCGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: SLSFVPEVRSPGTAKFTGGVSLD*TCIGRT
Trigger: AGTTCTTCCGATGCAGGTTCAGTCAAGGGAGACACC...GCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp ACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGATATCATAGCTCCAGCTaGCCAGTCCCATCAGATGCC +
Preference number: 4 (lower is better)
Translates to: TGSSLELESLKRGLMKPRYHSSS*PVPSDA
Trigger: GGCATCTGATGGGACTGGTCAGCTGGAGCTATGATA...TCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGTATCATAGCTCCAGCTaGCCAGTCCCATCAGATGCC +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWYHSSS*PVPSDA
Trigger: GGCATCTGATGGGACTGGTCAGCTGGAGCTATGATA...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp TGTCCCACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGATGGAAACAAGGGGATaGGGAGCATGGCATGCAGTC +
Preference number: 4 (lower is better)
Translates to: CPTGSSLELESLKRGLMKMETRG*GAWHAV
Trigger: GACTGCATGCCATGCTCCTCATCCCCTTGTTTCCAT...CTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGTGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS-3UTR TCA 90 bp TGTCCCACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGACTGAGTTTTGTCCCTaGAGTCAGAAGCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: CPTGSSLELESLKRGLMKTEFCP*SQKPWH
Trigger: GTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGT...CTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGTGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp CACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACTGAGTTTTGTCCCTaGAGTCAGAAGCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: HPSLSFVPEVRSPGTAKFTEFCP*SQKPWH
Trigger: GTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGT...GAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGACTGAGTTTTGTCCCTaGAGTCAGAAGCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWTEFCP*SQKPWH
Trigger: GTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGT...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp CCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCCTACTCACCCTTCACTaGGTTTTGTCCCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PIGCPSSGRGISLPAMEVLLTLH*VLSLKS
Trigger: TGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAG...GACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACCATGATATTCCACTCTaGTCCAGGGCAGGCTTCATT +
Preference number: 4 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHHDIPL*SRAGFI
Trigger: AATGAAGCCTGCCCTGGAGCAGAGTGGAATATCATG...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TCACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATATCCTCCGTACCAGCCTaGTCGGCACTCTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: SHFRPTLLHAMTHVQTDISSVPA*SALCTV
Trigger: TACTGTGCAGAGTGCCGAGCAGGCTGGTACGGAGGA...TATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCTGCCCAGTATAGCCTaGCAAGCAGGCACACTTGTA +
Preference number: 4 (lower is better)
Translates to: SLSFVPEVRSPGTAKFTGLPSIA*QAGTLV
Trigger: TACAAGTGTGCCTGCTTGGCAGGCTATACTGGGCAG...GCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAACTGCCCAGTATAGCCTaGCAAGCAGGCACACTTGTA +
Preference number: 4 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQLPSIA*QAGTLV
Trigger: TACAAGTGTGCCTGCTTGGCAGGCTATACTGGGCAG...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TGTCCCACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCTCGGCAGGCTTTTATaGAGATGGGCTGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: CPTGSSLELESLKRGLMKLGRLL*RWAVSL
Trigger: CAGGGAAACAGCCCATCTGCATAAAAGCCTGCCGAG...CTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGTGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGCTCGGCAGGCTTTTATaGAGATGGGCTGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWLGRLL*RWAVSL
Trigger: CAGGGAAACAGCCCATCTGCATAAAAGCCTGCCGAG...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TGTCCCACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGGGTAGAAGGGTGAGATaGACTCATACTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: CPTGSSLELESLKRGLMKGRRVR*THTGAG
Trigger: CCCAGCTCCAGTATGAGTGCATCTCACCCTTCTACC...CTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGTGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp TCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCGGTAGAAGGGTGAGATaGACTCATACTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SLSFVPEVRSPGTAKFTGGRRVR*THTGAG
Trigger: CCCAGCTCCAGTATGAGTGCATCTCACCCTTCTACC...GCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGATGTCCTCCTGCTGCTaGCCAGGCGGCGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: ASRNDTRTDGYTETLLKEMSSCC*PGGGRR
Trigger: CCTTCTACCGCCGCCTGGGCAGCAGCAGGAGGACAT...CTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGAAGACATGTCCTCCTGCTaGTGCCCAGGCGGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: GRPPGQWSGEVLYMVFFEDMSSC*CPGGGR
Trigger: TCTACCGCCGCCTGGGCAGCAGCAGGAGGACATGTC...TTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp GGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGAATGTAGGCTGCCGTCATaGACCCCGCTGGTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GRPPGQWSGEVLYMVFFECRLPS*TPLVLL
Trigger: CAGGAGGACCAGCGGGGTGCATGACGGCAGCCTACA...TTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp GAAGCCCAGATCTTCCCTGGTCAAGCTGATGGCATTCGTATAACTGAAAGTTGGAGGACACAGCCGCGATaGCTCCTGTCTCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: EAQIFPGQADGIRITESWRTQPR*LLSLQC
Trigger: GCACTGCAGAGACAGGAGGCATCGCGGCTGTGTCCT...CCAACTTTCAGTTATACGAATGCCATCAGCTTGACCAGGGAAGATCTGGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGGCGTGGCTCAGGAGATaGTCGTCCCGGGAAGGACAC +
Preference number: 4 (lower is better)
Translates to: RNDTRTDGYTETLLKECMAWLRR*SSREGH
Trigger: GTGTCCTTCCCGGGACGAGCATCTCCTGAGCCACGC...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGAAACCACATCCCAGCTCTaGTGCCCTGGGCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: GRPPGQWSGEVLYMVFFETTSQL*CPGLSH
Trigger: GTGGGACAGCCCAGGGCAGCAGAGCTGGGATGTGGT...TTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGCATCCTTGCCGCGGCTaGTGCCCGAGCGTCTACTGG +
Preference number: 4 (lower is better)
Translates to: TASRNDTRTDGYTETLLKHPCRG*CPSVYW
Trigger: CCAGTAGACGCTCGGGCACCAGCCGCGGCAAGGATG...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615849.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCAAAAGATGGTACAACCTaGGTGGATCAGGCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: LLASPGIFQLAVLVVDAAKDGTT*VDQAGV
Trigger: GACTCCTGCCTGATCCACCCAGGTTGTACCATCTTT...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp AGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACACAAAATCTGACCCTTTaGGGCTCGCAGAACCTGGCC +
Preference number: 4 (lower is better)
Translates to: RSTHPSLSFVPEVRSPGTQNLTL*GSQNLA
Trigger: GGCCAGGTTCTGCGAGCCCCAAAGGGTCAGATTTTG...TGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACACAAAATCTGACCCTTTaGGGCTCGCAGAACCTGGCC +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITQNLTL*GSQNLA
Trigger: GGCCAGGTTCTGCGAGCCCCAAAGGGTCAGATTTTG...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACACGCTTGATGATCTaGCCATCGCGGTTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGTRLMI*PSRLSP
Trigger: TGGAGACAACCGCGATGGCCAGATCATCAAGCGTGT...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAGGATCCTATGCTCTaGATAGGAGCTGGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTEDPML*IGAGRS
Trigger: CGAGCGGCCAGCTCCTATCCAGAGCATAGGATCCTC...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGGAGTGGAAGAGGACGTaGAGTGAGGATCCTATGCTC +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWEWKRT*SEDPML
Trigger: GAGCATAGGATCCTCACTCCACGTCCTCTTCCACTC...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCGAGTGGAAGAGGACGTaGAGTGAGGATCCTATGCTC +
Preference number: 4 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGEWKRT*SEDPML
Trigger: GAGCATAGGATCCTCACTCCACGTCCTCTTCCACTC...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TGTCCCACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGGAGTGGAAGAGGACGTaGAGTGAGGATCCTATGCTC +
Preference number: 4 (lower is better)
Translates to: CPTGSSLELESLKRGLMKEWKRT*SEDPML
Trigger: GAGCATAGGATCCTCACTCCACGTCCTCTTCCACTC...CTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGTGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp ACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGACCCCCTGTTATTTTCTaGTACCCATTGACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: TGSSLELESLKRGLMKPRPPVIF*YPLTGP
Trigger: GGGCCCAGTCAATGGGTACCAGAAAATAACAGGGGG...TCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCGATGTTGGTATCCCATaGGCAGATCTCCAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISDVGIP*ADLQRE
Trigger: TTCCCTTTGGAGATCTGCCCATGGGATACCAACATC...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCTGGGTATGCAGATGTTaGTATCCCATGGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISWVCRC*YPMGRS
Trigger: AGATCTGCCCATGGGATACCAACATCTGCATACCCA...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACGAGATGCACTCATACTaGAGCTGGGTATGCAGATGT +
Preference number: 4 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHEMHSY*SWVCRC
Trigger: ACATCTGCATACCCAGCTCCAGTATGAGTGCATCTC...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACAGGCCAGCGCAACCCTTaGGTCTTTGGAGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTGQRNP*VFGAVM
Trigger: CATCACTGCTCCAAAGACCCAAGGGTTGCGCTGGCC...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp AGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGTGGTCCTCCTGTAGATaGCTGCCTGCCACGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RNLLLASPGIFQLAVLVVWSSCR*LPATAS
Trigger: GCTGGCCGTGGCAGGCAGCCATCTACAGGAGGACCA...CACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp AAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTATCTGTAGGCTCTGGATaGTCTTCTCATCCCGGTCAT +
Preference number: 4 (lower is better)
Translates to: KPWHLPIGCPSSGRGISLSVGSG*SSHPGH
Trigger: ATGACCGGGATGAGAAGACCATCCAGAGCCTACAGA...TAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCACAGCATCAAGCAGGATaGGGTCATAGTTGGGATGCA +
Preference number: 4 (lower is better)
Translates to: LLASPGIFQLAVLVVDAAQHQAG*GHSWDA
Trigger: TGCATCCCAACTATGACCCCATCCTGCTTGATGCTG...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp AGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGCGAGGCAGATGGGCTaGACTCGGGTGCTGATACGG +
Preference number: 4 (lower is better)
Translates to: RNLLLASPGIFQLAVLVVARQMG*TRVLIR
Trigger: CCGTATCAGCACCCGAGTCCAGCCCATCTGCCTCGC...CACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp GGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGCATCAGATGCCAGCGTaGCTCAGGAGATGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: GEDHQVSGVERFCIWSSLHQMPA*LRRCSS
Trigger: GGACGAGCATCTCCTGAGCCACGCTGGCATCTGATG...CAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCGACTGTGTACTCTCTTaGCAAGGACGAGATGAGAAG +
Preference number: 4 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISDCVLS*QGRDEK
Trigger: CTTCTCATCTCGTCCTTGCCAAGAGAGTACACAGTC...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACACTTCTTGCAAGCCCTaGCATCTTCCAATTGGCTGT +
Preference number: 4 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHTSCKP*HLPIGC
Trigger: ACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGT...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACCGTATAACTGAAAGTTaGGGAAGACCACCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHRITES*GRPPGQ
Trigger: CTGACCTGGTGGTCTTCCCCAACTTTCAGTTATACG...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp CCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCCGTATAACTGAAAGTTaGGGAAGACCACCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: PIGCPSSGRGISLPAMEVRITES*GRPPGQ
Trigger: CTGACCTGGTGGTCTTCCCCAACTTTCAGTTATACG...GACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGCTTTCCAACAAAATCTaGCCCTTTGGGGCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWLSNKI*PFGARR
Trigger: TCTGCGAGCCCCAAAGGGTCAGATTTTGTTGGAAAG...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCCCTTCTCACCAGGTCTaGAATCTTTGGTTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGPSHQV*NLWFSA
Trigger: TGCCGAGAACCAAAGATTTCAGACCTGGTGAGAAGG...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp CACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCCCTTCTCACCAGGTCTaGAATCTTTGGTTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: HPSLSFVPEVRSPGTAKFPSHQV*NLWFSA
Trigger: TGCCGAGAACCAAAGATTTCAGACCTGGTGAGAAGG...GAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp TCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCCTTCTCACCAGGTCTaGAATCTTTGGTTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: SLSFVPEVRSPGTAKFTGPSHQV*NLWFSA
Trigger: TGCCGAGAACCAAAGATTTCAGACCTGGTGAGAAGG...GCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp GAAGCCCAGATCTTCCCTGGTCAAGCTGATGGCATTCGTATAACTGAAAGTTGGGCGGCGGTAGAAGGGTaGGATGCACTCATACTGGAG +
Preference number: 4 (lower is better)
Translates to: EAQIFPGQADGIRITESWAAVEG*DALILE
Trigger: CTCCAGTATGAGTGCATCTCACCCTTCTACCGCCGC...CCAACTTTCAGTTATACGAATGCCATCAGCTTGACCAGGGAAGATCTGGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp TGTCCCACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGGGGTCTTTGGAGCAGTaGTGTTCTCAATTTTCCCGC +
Preference number: 4 (lower is better)
Translates to: CPTGSSLELESLKRGLMKGSLEQ*CSQFSR
Trigger: GCGGGAAAATTGAGAACATCACTGCTCCAAAGACCC...CTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGTGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp TCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCGGGTCTTTGGAGCAGTaGTGTTCTCAATTTTCCCGC +
Preference number: 4 (lower is better)
Translates to: SLSFVPEVRSPGTAKFTGGSLEQ*CSQFSR
Trigger: GCGGGAAAATTGAGAACATCACTGCTCCAAAGACCC...GCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp CACACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCGCTGGACTCGGGTGCTaGTACGGGCCTTGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: HTASRNDTRTDGYTETLLAGLGC*YGPCLG
Trigger: TCCTAGACAAGGCCCGTATCAGCACCCGAGTCCAGC...GAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp GCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGCCTGGAAGGAAGTGCTaGGATCCCGACTGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: ASRNDTRTDGYTETLLKEPGRKC*DPDWQR
Trigger: TCGCTGCCAGTCGGGATCTCAGCACTTCCTTCCAGG...CTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp TGTCCCACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCACTGCTTCACGCAATaGCACACGTACAGACGGATA +
Preference number: 4 (lower is better)
Translates to: CPTGSSLELESLKRGLMKHCFTQ*HTYRRI
Trigger: TATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTG...CTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGTGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp TCACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATATCAAAAGGGGCCTCATaGAGCCCAGATCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SHFRPTLLHAMTHVQTDISKGAS*SPDLPW
Trigger: CCAGGGAAGATCTGGGCTTCATGAGGCCCCTTTTGA...TATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCACATGATATTCCACTCTaGTCCAGGGCAGGCTTCATT +
Preference number: 4 (lower is better)
Translates to: LLASPGIFQLAVLVVDAAHDIPL*SRAGFI
Trigger: AATGAAGCCTGCCCTGGAGCAGAGTGGAATATCATG...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCATTCTCCTCATTCCTaGAGCAAGGGATGGTATAAC +
Preference number: 4 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISHSPHS*SKGWYN
Trigger: GTTATACCATCCCTTGCTGCAGGAATGAGGAGAATG...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp AGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACACTCGGCAGGCTTTTATaGAGATGGGCTGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: RSTHPSLSFVPEVRSPGTLGRLL*RWAVSL
Trigger: CAGGGAAACAGCCCATCTGCATAAAAGCCTGCCGAG...TGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACAGGTAGAAGGGTGAGATaGACTCATACTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITGRRVR*THTGAG
Trigger: CCCAGCTCCAGTATGAGTGCATCTCACCCTTCTACC...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGACATGTCCTCCTGCTaGTGCCCAGGCGGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: LHAMTHVQTDIQKHFSRSDMSSC*CPGGGR
Trigger: TCTACCGCCGCCTGGGCAGCAGCAGGAGGACATGTC...ACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGAGGGATGCAGGATGGTaGCCGCCCACTCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: TASRNDTRTDGYTETLLKRDAGW*PPTPLP
Trigger: GGGAAGTGGAGTGGGCGGGCACCATCCTGCATCCCT...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCCCTCCTGTAGATGGCTaGCTGCCACGGCCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: WSSLKKLTSCKPWHLPIGPPVDG*LPRPAQ
Trigger: TTGCGCTGGCCGTGGCAGGCAGCCATCTACAGGAGG...GCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp GCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTCACCAGGGCACCGCTaGAGACTAGGAACCACGCTC +
Preference number: 4 (lower is better)
Translates to: ASRNDTRTDGYTETLLKESPGHR*RLGTTL
Trigger: GAGCGTGGTTCCTAGTCTGCAGCGGTGCCCTGGTGA...CTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGCAGCCACCACCACAGTaGGCTCATTCACCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: RNDTRTDGYTETLLKECMQPPPQ*AHSPGH
Trigger: GTGCCCTGGTGAATGAGCGCACTGTGGTGGTGGCTG...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCGATGCCTCCTGTCTCTaGAGTGCAGATATCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SLSFVPEVRSPGTAKFTGDASCL*SADIRR
Trigger: CCTTCTGATATCTGCACTGCAGAGACAGGAGGCATC...GCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TGTCCCACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGGATGCCTCCTGTCTCTaGAGTGCAGATATCAGAAGG +
Preference number: 4 (lower is better)
Translates to: CPTGSSLELESLKRGLMKDASCL*SADIRR
Trigger: CCTTCTGATATCTGCACTGCAGAGACAGGAGGCATC...CTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGTGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGACCACATCCCAGCTCTaGTGCCCTGGGCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: TASRNDTRTDGYTETLLKTTSQL*CPGLSH
Trigger: GTGGGACAGCCCAGGGCAGCAGAGCTGGGATGTGGT...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAACCCAGCTATCACTTCTaGAGATCAGCAGCTAAGCAG +
Preference number: 4 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQPSYHF*RSAAKQ
Trigger: CTGCTTAGCTGCTGATCTGCAGAAGTGATAGCTGGG...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS-3UTR CCA 90 bp CACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCAAAGATGGTACAACCTaGGTGGATCAGGCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: HPSLSFVPEVRSPGTAKFKDGTT*VDQAGV
Trigger: GACTCCTGCCTGATCCACCCAGGTTGTACCATCTTT...GAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCAAAGATGGTACAACCTaGGTGGATCAGGCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: SLSFVPEVRSPGTAKFTGKDGTT*VDQAGV
Trigger: GACTCCTGCCTGATCCACCCAGGTTGTACCATCTTT...GCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACAACACGCTTGATGATCTaGCCATCGCGGTTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITTRLMI*PSRLSP
Trigger: TGGAGACAACCGCGATGGCCAGATCATCAAGCGTGT...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCAGTGCCAATTTTAGCATaGCGTCCGTTGATAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LLASPGIFQLAVLVVDAAVPILA*RPLISP
Trigger: TGGGCTTATCAACGGACGCCATGCTAAAATTGGCAC...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp AAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTAGTGCCAATTTTAGCATaGCGTCCGTTGATAAGCCCA +
Preference number: 4 (lower is better)
Translates to: KPWHLPIGCPSSGRGISLVPILA*RPLISP
Trigger: TGGGCTTATCAACGGACGCCATGCTAAAATTGGCAC...TAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACATCCAAAGGGAAGGGCTaGCTTCTTGGTAGGGGCACT +
Preference number: 4 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTSKGKG*LLGRGT
Trigger: AGTGCCCCTACCAAGAAGCCAGCCCTTCCCTTTGGA...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp GACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCCAGCTCTGCTGCGATGTTGGTATCCCATaGGCAGATCTCCAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: DCTVAMYTKACTTSQLCCDVGIP*ADLQRE
Trigger: TTCCCTTTGGAGATCTGCCCATGGGATACCAACATC...GCAGCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACCACTCATACTGGAGCTaGGTATGCAGATGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHHSYWS*VCRCWY
Trigger: ATACCAACATCTGCATACCCAGCTCCAGTATGAGTG...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACCAACCCTTGGGTCTTTaGAGCAGTGATGTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHQPLGL*SSDVLN
Trigger: ATTGAGAACATCACTGCTCCAAAGACCCAAGGGTTG...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGTGGTCCTCCTGTAGATaGCTGCCTGCCACGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TASRNDTRTDGYTETLLKWSSCR*LPATAS
Trigger: GCTGGCCGTGGCAGGCAGCCATCTACAGGAGGACCA...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCTCTGTAGGCTCTGGATaGTCTTCTCATCCCGGTCAT +
Preference number: 4 (lower is better)
Translates to: HPSLSFVPEVRSPGTAKFSVGSG*SSHPGH
Trigger: ATGACCGGGATGAGAAGACCATCCAGAGCCTACAGA...GAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TGTCCCACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGGAAATCTGTAGGCTCTaGATGGTCTTCTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: CPTGSSLELESLKRGLMKEICRL*MVFSSR
Trigger: CCGGGATGAGAAGACCATCCAGAGCCTACAGATTTC...CTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGTGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAGAAATCTGTAGGCTCTaGATGGTCTTCTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQEICRL*MVFSSR
Trigger: CCGGGATGAGAAGACCATCCAGAGCCTACAGATTTC...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp ACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGAGAAATCTGTAGGCTCTaGATGGTCTTCTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: TGSSLELESLKRGLMKPREICRL*MVFSSR
Trigger: CCGGGATGAGAAGACCATCCAGAGCCTACAGATTTC...TCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCCTAGGAGCTTCAGGATaGCGATGTCAGCATCAAGCA +
Preference number: 4 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGLGASG*RCQHQA
Trigger: TGCTTGATGCTGACATCGCCATCCTGAAGCTCCTAG...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCGAGGCAGATGGGCTaGACTCGGGTGCTGATACGG +
Preference number: 4 (lower is better)
Translates to: LHAMTHVQTDIQKHFSRSARQMG*TRVLIR
Trigger: CCGTATCAGCACCCGAGTCCAGCCCATCTGCCTCGC...ACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCCAGTGGGTTCCCAGCTaGCACAGAACATGTTATCAG +
Preference number: 4 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGQWVPS*HRTCYQ
Trigger: CTGATAACATGTTCTGTGCCAGCTGGGAACCCACTG...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp GAAGCCCAGATCTTCCCTGGTCAAGCTGATGGCATTCGTATAACTGAAAGTTGGCATCAGATGCCAGCGTaGCTCAGGAGATGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: EAQIFPGQADGIRITESWHQMPA*LRRCSS
Trigger: GGACGAGCATCTCCTGAGCCACGCTGGCATCTGATG...CCAACTTTCAGTTATACGAATGCCATCAGCTTGACCAGGGAAGATCTGGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp TCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCTCAGCCTACCAGCAATaGAGGTCTACTCACCCTTCA +
Preference number: 4 (lower is better)
Translates to: SLSFVPEVRSPGTAKFTGSAYQQ*RSTHPS
Trigger: TGAAGGGTGAGTAGACCTCCATTGCTGGTAGGCTGA...GCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAATCAGCCTACCAGCAATaGAGGTCTACTCACCCTTCA +
Preference number: 4 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQSAYQQ*RSTHPS
Trigger: TGAAGGGTGAGTAGACCTCCATTGCTGGTAGGCTGA...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCACCAGGTCAGTGGAGTaGAGAGGTTTTGTATATGGT +
Preference number: 4 (lower is better)
Translates to: PIGCPSSGRGISLPAMEVTRSVE*RGFVYG
Trigger: ACCATATACAAAACCTCTCCACTCCACTGACCTGGT...GACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp AAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTAGACCAGACTGTACTGTaGCCATGTACACAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: KPWHLPIGCPSSGRGISLDQTVL*PCTQRH
Trigger: ATGCCTTTGTGTACATGGCCACAGTACAGTCTGGTC...TAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCAAGAAGGGCAGGATTGTaGAAAAGACAAAGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: LLASPGIFQLAVLVVDAARRAGL*KRQRAL
Trigger: AAGGGCCCTTTGTCTTTTCCACAATCCTGCCCTTCT...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS-3UTR TCA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAATTGGCAAGGACGAGATaGGAAGGAGCTGAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQLARTR*EGAEEK
Trigger: CTTTTCTTCAGCTCCTTCTCATCTCGTCCTTGCCAA...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp TCACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATAAGCACTCCCGACACATaGTATTCCACTCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SHFRPTLLHAMTHVQTDISTPDT*YSTLLQ
Trigger: CTGGAGCAGAGTGGAATATCATGTGTCGGGAGTGCT...TATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGCAGACGCACTCAATCTaGTCATATTCACAGCACTCC +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWQTHSI*SYSQHS
Trigger: GGAGTGCTGTGAATATGATCAGATTGAGTGCGTCTG...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACACTTTCCAACAAAATCTaGCCCTTTGGGGCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITLSNKI*PFGARR
Trigger: TCTGCGAGCCCCAAAGGGTCAGATTTTGTTGGAAAG...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAGAGGACGTGGAGTaGGGATCCTATGCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTEEDVE*GSYALD
Trigger: ATCCAGAGCATAGGATCCTCACTCCACGTCCTCTTC...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCAATGAGGAGCATGCTGTaGTCTCCTCATAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: LLASPGIFQLAVLVVDAAMRSML*SPHKWH
Trigger: ATGCCATTTATGAGGAGATCACAGCATGCTCCTCAT...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp AGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAATGGAAACAAGGGGATaGGGAGCATGCTGTGATCTC +
Preference number: 4 (lower is better)
Translates to: RSTHPSLSFVPEVRSPGTMETRG*GACCDL
Trigger: GAGATCACAGCATGCTCCTCATCCCCTTGTTTCCAT...TGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp GCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTTTTCTGGTACCCATTaGCTGGGCCCCCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: ASRNDTRTDGYTETLLKEFSGTH*LGPQGL
Trigger: CAGACCCTGGGGGCCCAGTCAATGGGTACCAGAAAA...CTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp GGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGGGTGTCTCCCTTGACTaGACCTGCATCGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: GEDHQVSGVERFCIWSSLGVSLD*TCIGRT
Trigger: AGTTCTTCCGATGCAGGTTCAGTCAAGGGAGACACC...CAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp CTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCTGGACTCGGGTGCTaGTACGGGCCTTGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: LHAMTHVQTDIQKHFSRSAGLGC*YGPCLG
Trigger: TCCTAGACAAGGCCCGTATCAGCACCCGAGTCCAGC...ACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp CTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTTCCAGCCAGCCACAGTaGTGTGGGACTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LHAMTHVQTDIQKHFSRSSSQPQ*CGTPGR
Trigger: CCTTCCAGGAGTCCCACATCACTGTGGCTGGCTGGA...ACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp AAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTTCCAGCCAGCCACAGTaGTGTGGGACTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: KKLTSCKPWHLPIGCPSSSSQPQ*CGTPGR
Trigger: CCTTCCAGGAGTCCCACATCACTGTGGCTGGCTGGA...ACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp GAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCAGCGAGTCCACCACACTaGCCACCCCAGAGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: EVLYMVFFEETYFLQALAASPPH*PPQSAV
Trigger: CACTGCGCTCTGGGGTGGTCAGTGTGGTGGACTCGC...TGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp CACACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGCAGCACCTTGGTaGAGGCAGTGGAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: HTASRNDTRTDGYTETLLKAAPW*RQWRAC
Trigger: ACAGGCTCTCCACTGCCTTCACCAAGGTGCTGCCTT...GAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACACACTGCTTCACGCAATaGCACACGTACAGACGGATA +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITHCFTQ*HTYRRI
Trigger: TATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTG...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGCTACTCACCCTTCACTaGGTTTTGTCCCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWLLTLH*VLSLKS
Trigger: TGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAG...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACACAGCTCTCTAGAACTTaGGAGCCTCAAAAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTQLSRT*EPQKGP
Trigger: AGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTG...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp GGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGCAGCTCTCTAGAACTTaGGAGCCTCAAAAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GEDHQVSGVERFCIWSSLQLSRT*EPQKGP
Trigger: AGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTG...CAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp AGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGAAAGTGAGCCCCAACTaGGTCCAGCAACCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RNLLLASPGIFQLAVLVVKVSPN*VQQPSS
Trigger: GGAGCTGGGTTGCTGGACGCAGTTGGGGCTCACTTT...CACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGCATGATATTCCACTCTaGTCCAGGGCAGGCTTCATT +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWHDIPL*SRAGFI
Trigger: AATGAAGCCTGCCCTGGAGCAGAGTGGAATATCATG...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCATTTCGGCAGCTCTTaGAGTTTTCAAAGATGGTAC +
Preference number: 4 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISHFGSS*SFQRWY
Trigger: GTACCATCTTTGAAAACTGCAAGAGCTGCCGAAATG...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CACACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCTCCTCCGTACCAGCCTaGTCGGCACTCTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: HTASRNDTRTDGYTETLLSSVPA*SALCTV
Trigger: TACTGTGCAGAGTGCCGAGCAGGCTGGTACGGAGGA...GAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGTCCTCCGTACCAGCCTaGTCGGCACTCTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: RNDTRTDGYTETLLKECMSSVPA*SALCTV
Trigger: TACTGTGCAGAGTGCCGAGCAGGCTGGTACGGAGGA...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CTGAAAGTTGGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGCTCGGCAGGCTTTTATaGAGATGGGCTGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LKVGEDHQVSGVERFCIWLGRLL*RWAVSL
Trigger: CAGGGAAACAGCCCATCTGCATAAAAGCCTGCCGAG...CCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCCAACTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACACTCGGCAGGCTTTTATaGAGATGGGCTGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTLGRLL*RWAVSL
Trigger: CAGGGAAACAGCCCATCTGCATAAAAGCCTGCCGAG...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGTACTGGAGCTGGGTATaGAGATGTTGGTATCCCATG +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWYWSWV*RCWYPM
Trigger: CATGGGATACCAACATCTGCATACCCAGCTCCAGTA...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCCAGCCACCACCACAGTaGGCTCATTCACCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: WSSLKKLTSCKPWHLPIGQPPPQ*AHSPGH
Trigger: GTGCCCTGGTGAATGAGCGCACTGTGGTGGTGGCTG...GCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp AAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTAGGACACAGCCGCGATaGCTCCTGTCTCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: KKLTSCKPWHLPIGCPSSRTQPR*LLSLQC
Trigger: GCACTGCAGAGACAGGAGGCATCGCGGCTGTGTCCT...ACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCACTGACCACTCCATTCTaGTGGCAAGTTCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LLASPGIFQLAVLVVDAALTTPF*WQVLFS
Trigger: TGAGAAAAGAACTTGCCAGCAGAATGGAGTGGTCAG...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611014.4
CDS-3UTR GCA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAATGGAGAGCCTGTGGCTaGATGTTTTATCATAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQWRACG*MFYHSS
Trigger: GGAGCTATGATAAAACATGCAGCCACAGGCTCTCCA...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCTGGAGAGCCTGTGGCTaGATGTTTTATCATAGCTCC +
Preference number: 4 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGWRACG*MFYHSS
Trigger: GGAGCTATGATAAAACATGCAGCCACAGGCTCTCCA...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GGAAAAGGACCAGACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCATGTACACAAAGGCATaGACCACATCCCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GKGPDCTVAMYTKACTTSMYTKA*TTSQLC
Trigger: GCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACAT...GGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTCTGGTCCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACAATGGTACAACCTGGGTaGATCAGGCAGGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTMVQPG*IRQESH
Trigger: GTGTGACTCCTGCCTGATCCACCCAGGTTGTACCAT...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp AGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAAAAGATGGTACAACCTaGGTGGATCAGGCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: RSTHPSLSFVPEVRSPGTKDGTT*VDQAGV
Trigger: GACTCCTGCCTGATCCACCCAGGTTGTACCATCTTT...TGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGATCTTCCCTGAAAGATGGTACAACCTaGGTGGATCAGGCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: SLELESLKRGLMKPRSSLKDGTT*VDQAGV
Trigger: GACTCCTGCCTGATCCACCCAGGTTGTACCATCTTT...CAGGGAAGATCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGCTCTGGATAGGAGCTaGCCGCTCGTTGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: TASRNDTRTDGYTETLLKALDRS*PLVATD
Trigger: GTCTGTGGCAACGAGCGGCCAGCTCCTATCCAGAGC...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CACACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCGATAGGGATGCAGGATaGTGCCCGCCCACTCCACTT +
Preference number: 4 (lower is better)
Translates to: HTASRNDTRTDGYTETLLDRDAG*CPPTPL
Trigger: AAGTGGAGTGGGCGGGCACCATCCTGCATCCCTATC...GAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGGGCCAGCGCAACCCTTaGGTCTTTGGAGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: RNDTRTDGYTETLLKECMGQRNP*VFGAVM
Trigger: CATCACTGCTCCAAAGACCCAAGGGTTGCGCTGGCC...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CACACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCGGCCAGCGCAACCCTTaGGTCTTTGGAGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: HTASRNDTRTDGYTETLLGQRNP*VFGAVM
Trigger: CATCACTGCTCCAAAGACCCAAGGGTTGCGCTGGCC...GAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp AGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACATCTGTAGGCTCTGGATaGTCTTCTCATCCCGGTCAT +
Preference number: 4 (lower is better)
Translates to: RSTHPSLSFVPEVRSPGTSVGSG*SSHPGH
Trigger: ATGACCGGGATGAGAAGACCATCCAGAGCCTACAGA...TGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACAGAAATCTGTAGGCTCTaGATGGTCTTCTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITEICRL*MVFSSR
Trigger: CCGGGATGAGAAGACCATCCAGAGCCTACAGATTTC...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp AGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACACTAGGAGCTTCAGGATaGCGATGTCAGCATCAAGCA +
Preference number: 4 (lower is better)
Translates to: RSTHPSLSFVPEVRSPGTLGASG*RCQHQA
Trigger: TGCTTGATGCTGACATCGCCATCCTGAAGCTCCTAG...TGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACACTAGGAGCTTCAGGATaGCGATGTCAGCATCAAGCA +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITLGASG*RCQHQA
Trigger: TGCTTGATGCTGACATCGCCATCCTGAAGCTCCTAG...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp AGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACACAGTGGGTTCCCAGCTaGCACAGAACATGTTATCAG +
Preference number: 4 (lower is better)
Translates to: RSTHPSLSFVPEVRSPGTQWVPS*HRTCYQ
Trigger: CTGATAACATGTTCTGTGCCAGCTGGGAACCCACTG...TGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGCATCAGATGCCAGCGTaGCTCAGGAGATGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: RNDTRTDGYTETLLKECMHQMPA*LRRCSS
Trigger: GGACGAGCATCTCCTGAGCCACGCTGGCATCTGATG...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCGTATAACTGAAAGTTaGGGAAGACCACCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SLSFVPEVRSPGTAKFTGRITES*GRPPGQ
Trigger: CTGACCTGGTGGTCTTCCCCAACTTTCAGTTATACG...GCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAACGTATAACTGAAAGTTaGGGAAGACCACCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQRITES*GRPPGQ
Trigger: CTGACCTGGTGGTCTTCCCCAACTTTCAGTTATACG...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp TGTCCCACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGGACCAGACTGTACTGTaGCCATGTACACAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: CPTGSSLELESLKRGLMKDQTVL*PCTQRH
Trigger: ATGCCTTTGTGTACATGGCCACAGTACAGTCTGGTC...CTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGTGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR CAA 72 bp AGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATaGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTAC +
Preference number: 4 (lower is better)
Translates to: RNLLLASPGIFQ*AVLVVDAASAY
Trigger: GTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAGATGAGAAGGAGCTaGAGAAAAGTGAGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTEMRRS*RKVSPN
Trigger: GTTGGGGCTCACTTTTCTTCAGCTCCTTCTCATCTC...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp TCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGATCTTCCCTGCAGACGCACTCAATCTaGTCATATTCACAGCACTCC +
Preference number: 4 (lower is better)
Translates to: SLELESLKRGLMKPRSSLQTHSI*SYSQHS
Trigger: GGAGTGCTGTGAATATGATCAGATTGAGTGCGTCTG...CAGGGAAGATCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp TCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCATGAGGAGCATGCTGTaGTCTCCTCATAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: SLSFVPEVRSPGTAKFTGMRSML*SPHKWH
Trigger: ATGCCATTTATGAGGAGATCACAGCATGCTCCTCAT...GCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp GGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGAATGGGCCCCCAGGGTCTaGGCAGTTTCTTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: GRPPGQWSGEVLYMVFFEWAPRV*AVSFFK
Trigger: CTTGAAGAAAGAAACTGCTCAGACCCTGGGGGCCCA...TTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGTGGGCCCCCAGGGTCTaGGCAGTTTCTTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: RNDTRTDGYTETLLKECMWAPRV*AVSFFK
Trigger: CTTGAAGAAAGAAACTGCTCAGACCCTGGGGGCCCA...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGTTTTCTGGTACCCATTaGCTGGGCCCCCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: TASRNDTRTDGYTETLLKFSGTH*LGPQGL
Trigger: CAGACCCTGGGGGCCCAGTCAATGGGTACCAGAAAA...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp TCACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATAGGGTCTTTGGAGCAGTaGTGTTCTCAATTTTCCCGC +
Preference number: 4 (lower is better)
Translates to: SHFRPTLLHAMTHVQTDIGSLEQ*CSQFSR
Trigger: GCGGGAAAATTGAGAACATCACTGCTCCAAAGACCC...TATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp AAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGCAGTGTGTCGTTCTTaGAGCCAGGGCTCCTCACGT +
Preference number: 4 (lower is better)
Translates to: KKLTSCKPWHLPIGCPSSAVCRS*SQGSSR
Trigger: ACGTGAGGAGCCCTGGCTTCAAGAACGACACACTGC...ACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp TGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCAAGGCAGCACCTTGGTaGAGGCAGTGGAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: WSSLKKLTSCKPWHLPIGKAAPW*RQWRAC
Trigger: ACAGGCTCTCCACTGCCTTCACCAAGGTGCTGCCTT...GCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGAAGGCAGCACCTTGGTaGAGGCAGTGGAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: TASRNDTRTDGYTETLLKKAAPW*RQWRAC
Trigger: ACAGGCTCTCCACTGCCTTCACCAAGGTGCTGCCTT...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCTTCTCAAGGAGTGCATaGGCATGGTTCATTTCATAT +
Preference number: 4 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISFSRSA*AWFISY
Trigger: ATATGAAATGAACCATGCTCATGCACTCCTTGAGAA...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp CCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTTCTCAAGGAGTGCATaGGCATGGTTCATTTCATAT +
Preference number: 4 (lower is better)
Translates to: PIGCPSSGRGISLPAMEVFSRSA*AWFISY
Trigger: ATATGAAATGAACCATGCTCATGCACTCCTTGAGAA...GACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp GAAGCCCAGATCTTCCCTGGTCAAGCTGATGGCATTCGTATAACTGAAAGTTGGACTGAGTTTTGTCCCTaGAGTCAGAAGCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: EAQIFPGQADGIRITESWTEFCP*SQKPWH
Trigger: GTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGT...CCAACTTTCAGTTATACGAATGCCATCAGCTTGACCAGGGAAGATCTGGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp TCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGATCTTCCCTGCTACTCACCCTTCACTaGGTTTTGTCCCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SLELESLKRGLMKPRSSLLLTLH*VLSLKS
Trigger: TGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAG...CAGGGAAGATCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACACTACTCACCCTTCACTaGGTTTTGTCCCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITLLTLH*VLSLKS
Trigger: TGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAG...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp AGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGTCAAAAGGGGCCTCATaGAGCCCAGATCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: RNLLLASPGIFQLAVLVVSKGAS*SPDLPW
Trigger: CCAGGGAAGATCTGGGCTTCATGAGGCCCCTTTTGA...CACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp AAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTAAGGAGACTGTCTTTGTaGATTCTTACAGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: KPWHLPIGCPSSGRGISLRRLSL*ILTVPS
Trigger: AGAGGGAACTGTAAGAATTCACAAAGACAGTCTCCT...TAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS-3UTR GCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACACATGATATTCCACTCTaGTCCAGGGCAGGCTTCATT +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITHDIPL*SRAGFI
Trigger: AATGAAGCCTGCCCTGGAGCAGAGTGGAATATCATG...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp AAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGCCTGCTCGGCACTCTaGACAGTAGAACCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: KKLTSCKPWHLPIGCPSSACSAL*TVEPLH
Trigger: GTGAAGGGGTTCTACTGTGCAGAGTGCCGAGCAGGC...ACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGGACCACTCTCCATTCTaGTGGCAAGTTCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWDHSPF*WQVLFS
Trigger: TGAGAAAAGAACTTGCCAGCAGAATGGAGAGTGGTC...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp ACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGAGACCACTCTCCATTCTaGTGGCAAGTTCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: TGSSLELESLKRGLMKPRDHSPF*WQVLFS
Trigger: TGAGAAAAGAACTTGCCAGCAGAATGGAGAGTGGTC...TCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGGCACTCTGCAGTTTCTaGTTGCTGAAGGCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: RNDTRTDGYTETLLKECMALCSF*LLKAAE
Trigger: CTCAGCGGCCTTCAGCAAGCAGAAACTGCAGAGTGC...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp AGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGCACTCTGCAGTTTCTaGTTGCTGAAGGCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: RNLLLASPGIFQLAVLVVALCSF*LLKAAE
Trigger: CTCAGCGGCCTTCAGCAAGCAGAAACTGCAGAGTGC...CACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGGCACTCTGCAGTTTCTaGTTGCTGAAGGCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: ASRNDTRTDGYTETLLKEALCSF*LLKAAE
Trigger: CTCAGCGGCCTTCAGCAAGCAGAAACTGCAGAGTGC...CTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACATTGGTAGGGGCACTCTaGAGTTTCTGCTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTLVGAL*SFCLLK
Trigger: CTTCAGCAAGCAGAAACTGCAGAGTGCCCCTACCAA...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACATACTGGAGCTGGGTATaGAGATGTTGGTATCCCATG +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITYWSWV*RCWYPM
Trigger: CATGGGATACCAACATCTGCATACCCAGCTCCAGTA...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GAGAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCTCCCTTGTGTAGGCTaGCGTCATGCACCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: ERFCIWSSLKKLTSCKPWLPCVG*RHAPRW
Trigger: CCAGCGGGGTGCATGACGGCAGCCTACACAAGGGAG...CCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp GACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCCAGCTCTGCTGCAACAACTTTCAGGTCTaGTGTCTTGATCATGGTGAC +
Preference number: 4 (lower is better)
Translates to: DCTVAMYTKACTTSQLCCNNFQV*CLDHGD
Trigger: GTCACCATGATCAAGACAGCAGACCTGAAAGTTGTT...GCAGCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGATGCCATGGTCCTCATaGTGCTCCTCACACAGCAGC +
Preference number: 4 (lower is better)
Translates to: RNDTRTDGYTETLLKECMMPWSS*CSSHSS
Trigger: GCTGCTGTGTGAGGAGCAGCATGAGGACCATGGCAT...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGATGCCATGGTCCTCATaGTGCTCCTCACACAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASRNDTRTDGYTETLLKEMPWSS*CSSHSS
Trigger: GCTGCTGTGTGAGGAGCAGCATGAGGACCATGGCAT...CTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CACACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCATGCCATGGTCCTCATaGTGCTCCTCACACAGCAGC +
Preference number: 4 (lower is better)
Translates to: HTASRNDTRTDGYTETLLMPWSS*CSSHSS
Trigger: GCTGCTGTGTGAGGAGCAGCATGAGGACCATGGCAT...GAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp AGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGATGAGGAGCATGGCATaGAGTCTCCTCCGTACCAGC +
Preference number: 4 (lower is better)
Translates to: RNLLLASPGIFQLAVLVVMRSMA*SLLRTS
Trigger: GCTGGTACGGAGGAGACTGCATGCCATGCTCCTCAT...CACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS-3UTR GCA 90 bp AGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACATGGAGAGCCTGTGGCTaGATGTTTTATCATAGCTCC +
Preference number: 4 (lower is better)
Translates to: RSTHPSLSFVPEVRSPGTWRACG*MFYHSS
Trigger: GGAGCTATGATAAAACATGCAGCCACAGGCTCTCCA...TGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGATCTTCCCTGTGGAGAGCCTGTGGCTaGATGTTTTATCATAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLELESLKRGLMKPRSSLWRACG*MFYHSS
Trigger: GGAGCTATGATAAAACATGCAGCCACAGGCTCTCCA...CAGGGAAGATCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACAACCATCATGCTGGTCTaGCTCTCAGGTATGTCGTTC +
Preference number: 4 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTTIMLV*LSGMSF
Trigger: GAACGACATACCTGAGAGCCAGACCAGCATGATGGT...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS-3UTR CCA 90 bp AAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTATGCAGTTTTCAAAGATaGTACAACCTGGGTGGATCA +
Preference number: 4 (lower is better)
Translates to: KPWHLPIGCPSSGRGISLCSFQR*YNLGGS
Trigger: TGATCCACCCAGGTTGTACCATCTTTGAAAACTGCA...TAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp GGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGAATTGGAGCCATCGGAGTaGAAGAGGACGTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: GRPPGQWSGEVLYMVFFELEPSE*KRTWSE
Trigger: CTCACTCCACGTCCTCTTCCACTCCGATGGCTCCAA...TTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp ACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGAAACCGTCAAAATTCTTaGAGCCATCGGAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TGSSLELESLKRGLMKPRNRQNS*SHRSGR
Trigger: TCTTCCACTCCGATGGCTCCAAGAATTTTGACGGTT...TCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp GGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGAAACGCACGTGCCGTCATaGAAACAAGGGGATGAGGAG +
Preference number: 4 (lower is better)
Translates to: GRPPGQWSGEVLYMVFFETHVPS*KQGDEE
Trigger: CTCCTCATCCCCTTGTTTCCATGACGGCACGTGCGT...TTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp GGAAAAGGACCAGACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCGTGCCAATTTTAGCATaGCGTCCGTTGATAAGCCCA +
Preference number: 4 (lower is better)
Translates to: GKGPDCTVAMYTKACTTSVPILA*RPLISP
Trigger: TGGGCTTATCAACGGACGCCATGCTAAAATTGGCAC...GGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTCTGGTCCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACAGTGCCAATTTTAGCATaGCGTCCGTTGATAAGCCCA +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITVPILA*RPLISP
Trigger: TGGGCTTATCAACGGACGCCATGCTAAAATTGGCAC...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp GCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTCCAAAGGGAAGGGCTaGCTTCTTGGTAGGGGCACT +
Preference number: 4 (lower is better)
Translates to: ASRNDTRTDGYTETLLKESKGKG*LLGRGT
Trigger: AGTGCCCCTACCAAGAAGCCAGCCCTTCCCTTTGGA...CTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp AGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACATGGGTATGCAGATGTTaGTATCCCATGGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: RSTHPSLSFVPEVRSPGTWVCRC*YPMGRS
Trigger: AGATCTGCCCATGGGATACCAACATCTGCATACCCA...TGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGCACTCATACTGGAGCTaGGTATGCAGATGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWHSYWS*VCRCWY
Trigger: ATACCAACATCTGCATACCCAGCTCCAGTATGAGTG...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAACACTCATACTGGAGCTaGGTATGCAGATGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQHSYWS*VCRCWY
Trigger: ATACCAACATCTGCATACCCAGCTCCAGTATGAGTG...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp AGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGAGATGCACTCATACTaGAGCTGGGTATGCAGATGT +
Preference number: 4 (lower is better)
Translates to: RSTHPSLSFVPEVRSPGTEMHSY*SWVCRC
Trigger: ACATCTGCATACCCAGCTCCAGTATGAGTGCATCTC...TGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGATAGGGATGCAGGATaGTGCCCGCCCACTCCACTT +
Preference number: 4 (lower is better)
Translates to: LHAMTHVQTDIQKHFSRSDRDAG*CPPTPL
Trigger: AAGTGGAGTGGGCGGGCACCATCCTGCATCCCTATC...ACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACAACTTCTTGCAAGCCCTaGCATCTTCCAATTGGCTGT +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITTSCKP*HLPIGC
Trigger: ACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGT...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp AGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAACTTCTTGCAAGCCCTaGCATCTTCCAATTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RSTHPSLSFVPEVRSPGTTSCKP*HLPIGC
Trigger: ACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGT...TGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp AGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGTGCCACCAGGGAGGCTaGTTGCATGTGAATCCACAG +
Preference number: 4 (lower is better)
Translates to: RNLLLASPGIFQLAVLVVCHQGG*LHVNPQ
Trigger: CTGTGGATTCACATGCAACCAGCCTCCCTGGTGGCA...CACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS-3UTR TCA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACACAGACGCACTCAATCTaGTCATATTCACAGCACTCC +
Preference number: 4 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTQTHSI*SYSQHS
Trigger: GGAGTGCTGTGAATATGATCAGATTGAGTGCGTCTG...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp GGAAAAGGACCAGACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCATGAGGAGCATGCTGTaGTCTCCTCATAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: GKGPDCTVAMYTKACTTSMRSML*SPHKWH
Trigger: ATGCCATTTATGAGGAGATCACAGCATGCTCCTCAT...GGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTCTGGTCCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp GAGAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGTCCAGCCAGCCACAGTaGTGTGGGACTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: ERFCIWSSLKKLTSCKPWSSQPQ*CGTPGR
Trigger: CCTTCCAGGAGTCCCACATCACTGTGGCTGGCTGGA...CCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp GACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCCAGCTCTGCTGCTTCTCAAGGAGTGCATaGGCATGGTTCATTTCATAT +
Preference number: 4 (lower is better)
Translates to: DCTVAMYTKACTTSQLCCFSRSA*AWFISY
Trigger: ATATGAAATGAACCATGCTCATGCACTCCTTGAGAA...GCAGCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGTCAAAAGGGGCCTCATaGAGCCCAGATCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TASRNDTRTDGYTETLLKSKGAS*SPDLPW
Trigger: CCAGGGAAGATCTGGGCTTCATGAGGCCCCTTTTGA...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp TGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTCAAAAGGGGCCTCATaGAGCCCAGATCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: WSSLKKLTSCKPWHLPIGSKGAS*SPDLPW
Trigger: CCAGGGAAGATCTGGGCTTCATGAGGCCCCTTTTGA...GCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACACATTCTCCTCATTCCTaGAGCAAGGGATGGTATAAC +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITHSPHS*SKGWYN
Trigger: GTTATACCATCCCTTGCTGCAGGAATGAGGAGAATG...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGCATTTCGGCAGCTCTTaGAGTTTTCAAAGATGGTAC +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWHFGSS*SFQRWY
Trigger: GTACCATCTTTGAAAACTGCAAGAGCTGCCGAAATG...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCAAGGACGCACGTaGCGTCATGGAAACAAGGGG +
Preference number: 4 (lower is better)
Translates to: WSSLKKLTSCKPWHLPIGCQGRT*RHGNKG
Trigger: CCCCTTGTTTCCATGACGGCACGTGCGTCCTTGACA...GCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGTGTCAAGGACGCACGTaGCGTCATGGAAACAAGGGG +
Preference number: 4 (lower is better)
Translates to: TASRNDTRTDGYTETLLKCQGRT*RHGNKG
Trigger: CCCCTTGTTTCCATGACGGCACGTGCGTCCTTGACA...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACAGACCACTCTCCATTCTaGTGGCAAGTTCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITDHSPF*WQVLFS
Trigger: TGAGAAAAGAACTTGCCAGCAGAATGGAGAGTGGTC...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TCACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATATACTGGAGCTGGGTATaGAGATGTTGGTATCCCATG +
Preference number: 4 (lower is better)
Translates to: SHFRPTLLHAMTHVQTDIYWSWV*RCWYPM
Trigger: CATGGGATACCAACATCTGCATACCCAGCTCCAGTA...TATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGGGTAGAAGGGTGAGATaGACTCATACTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: ASRNDTRTDGYTETLLKEGRRVR*THTGAG
Trigger: CCCAGCTCCAGTATGAGTGCATCTCACCCTTCTACC...CTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp ACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGAAACAACTTTCAGGTCTaGTGTCTTGATCATGGTGAC +
Preference number: 4 (lower is better)
Translates to: TGSSLELESLKRGLMKPRNNFQV*CLDHGD
Trigger: GTCACCATGATCAAGACAGCAGACCTGAAAGTTGTT...TCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp GAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCAAGGGCTCCTCACGTCTaGCAGGACATTCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: EVLYMVFFEETYFLQALARAPHV*QDIPAS
Trigger: GCTGGCTGGAATGTCCTGGCAGACGTGAGGAGCCCT...TGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGACACTTCTCAAGGAGTaGATGAGCATGGTTCATTTC +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWTLLKE*MSMVHF
Trigger: GAAATGAACCATGCTCATGCACTCCTTGAGAAGTGT...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACACTTCTCAAGGAGTaGATGAGCATGGTTCATTTC +
Preference number: 4 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGTLLKE*MSMVHF
Trigger: GAAATGAACCATGCTCATGCACTCCTTGAGAAGTGT...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCAAGAAACTTACTTCTTaGAAGCCCTGGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: SLSFVPEVRSPGTAKFTGKKLTS*KPWHLP
Trigger: TGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT...GCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TGTCCCACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGAAGAAACTTACTTCTTaGAAGCCCTGGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: CPTGSSLELESLKRGLMKKKLTS*KPWHLP
Trigger: TGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT...CTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGTGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGGGTTTCCATCAGCTGTaGAAAACACCAAGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWGFHQL*KTPSSS
Trigger: ACTTGAACTTGGTGTTTTGCACAGCTGATGGAAACC...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS-3UTR CCA 90 bp GCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGATGGTACAACCTGGGTaGATCAGGCAGGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: ASRNDTRTDGYTETLLKEMVQPG*IRQESH
Trigger: GTGTGACTCCTGCCTGATCCACCCAGGTTGTACCAT...CTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGATGGTACAACCTGGGTaGATCAGGCAGGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: RNDTRTDGYTETLLKECMMVQPG*IRQESH
Trigger: GTGTGACTCCTGCCTGATCCACCCAGGTTGTACCAT...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCTGCAGTTTTCAAAGATaGTACAACCTGGGTGGATCA +
Preference number: 4 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGCSFQR*YNLGGS
Trigger: TGATCCACCCAGGTTGTACCATCTTTGAAAACTGCA...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTTGGAGCCATCGGAGTaGAAGAGGACGTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: WSSLKKLTSCKPWHLPIGLEPSE*KRTWSE
Trigger: CTCACTCCACGTCCTCTTCCACTCCGATGGCTCCAA...GCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp TGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCACGCACGTGCCGTCATaGAAACAAGGGGATGAGGAG +
Preference number: 4 (lower is better)
Translates to: WSSLKKLTSCKPWHLPIGTHVPS*KQGDEE
Trigger: CTCCTCATCCCCTTGTTTCCATGACGGCACGTGCGT...GCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp TCACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATAGAGATGCACTCATACTaGAGCTGGGTATGCAGATGT +
Preference number: 4 (lower is better)
Translates to: SHFRPTLLHAMTHVQTDIEMHSY*SWVCRC
Trigger: ACATCTGCATACCCAGCTCCAGTATGAGTGCATCTC...TATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp GAAGCCCAGATCTTCCCTGGTCAAGCTGATGGCATTCGTATAACTGAAAGTTGGTCTGTAGGCTCTGGATaGTCTTCTCATCCCGGTCAT +
Preference number: 4 (lower is better)
Translates to: EAQIFPGQADGIRITESWSVGSG*SSHPGH
Trigger: ATGACCGGGATGAGAAGACCATCCAGAGCCTACAGA...CCAACTTTCAGTTATACGAATGCCATCAGCTTGACCAGGGAAGATCTGGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp CTGAAAGTTGGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGGACTGTGTACTCTCTTaGCAAGGACGAGATGAGAAG +
Preference number: 4 (lower is better)
Translates to: LKVGEDHQVSGVERFCIWDCVLS*QGRDEK
Trigger: CTTCTCATCTCGTCCTTGCCAAGAGAGTACACAGTC...CCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCCAACTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp CTGAAAGTTGGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGACTTCTTGCAAGCCCTaGCATCTTCCAATTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LKVGEDHQVSGVERFCIWTSCKP*HLPIGC
Trigger: ACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGT...CCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCCAACTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGGAGCCTGCTGTAACTaGCCCCTTCATGGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: TASRNDTRTDGYTETLLKGACCN*PLHGSL
Trigger: GAGACTTCCATGAAGGGGCCAGTTACAGCAGGCTCC...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS-3UTR TCA 90 bp GCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGCTTTCCAACAAAATCTaGCCCTTTGGGGCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: ASRNDTRTDGYTETLLKELSNKI*PFGARR
Trigger: TCTGCGAGCCCCAAAGGGTCAGATTTTGTTGGAAAG...CTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp AAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGAAGAGGACGTGGAGTaGGGATCCTATGCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: KKLTSCKPWHLPIGCPSSEEDVE*GSYALD
Trigger: ATCCAGAGCATAGGATCCTCACTCCACGTCCTCTTC...ACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp GCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGATGGAAACAAGGGGATaGGGAGCATGCTGTGATCTC +
Preference number: 4 (lower is better)
Translates to: ASRNDTRTDGYTETLLKEMETRG*GACCDL
Trigger: GAGATCACAGCATGCTCCTCATCCCCTTGTTTCCAT...CTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp AAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGTGTCTCCCTTGACTaGACCTGCATCGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: KKLTSCKPWHLPIGCPSSGVSLD*TCIGRT
Trigger: AGTTCTTCCGATGCAGGTTCAGTCAAGGGAGACACC...ACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp CTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGGTGTCTCCCTTGACTaGACCTGCATCGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: LHAMTHVQTDIQKHFSRSGVSLD*TCIGRT
Trigger: AGTTCTTCCGATGCAGGTTCAGTCAAGGGAGACACC...ACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp TATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATCCTGGAAGGAAGTGCTaGGATCCCGACTGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: YMVFFEETYFLQALASSNPGRKC*DPDWQR
Trigger: TCGCTGCCAGTCGGGATCTCAGCACTTCCTTCCAGG...ATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp GAAGCCCAGATCTTCCCTGGTCAAGCTGATGGCATTCGTATAACTGAAAGTTGGTGGCATTCGTATAACTaGAAGTTGGGGAAGACCACC +
Preference number: 4 (lower is better)
Translates to: EAQIFPGQADGIRITESWWHSYN*KLGKTT
Trigger: GGTGGTCTTCCCCAACTTTCAGTTATACGAATGCCA...CCAACTTTCAGTTATACGAATGCCATCAGCTTGACCAGGGAAGATCTGGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp GAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTCCCATCCTCATCTaGGGGGAACCACCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: EVLYMVFFEETYFLQALASPILI*GEPPSA
Trigger: GGCTGAAGGTGGTTCCCCTCAGATGAGGATGGGAGA...TGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS-3UTR GCA 90 bp GAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCAAAAGTGAGCCCCAACTaGGTCCAGCAACCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EVLYMVFFEETYFLQALAKVSPN*VQQPSS
Trigger: GGAGCTGGGTTGCTGGACGCAGTTGGGGCTCACTTT...TGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACACATTTCGGCAGCTCTTaGAGTTTTCAAAGATGGTAC +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITHFGSS*SFQRWY
Trigger: GTACCATCTTTGAAAACTGCAAGAGCTGCCGAAATG...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGCTGCCCAGTATAGCCTaGCAAGCAGGCACACTTGTA +
Preference number: 4 (lower is better)
Translates to: TASRNDTRTDGYTETLLKLPSIA*QAGTLV
Trigger: TACAAGTGTGCCTGCTTGGCAGGCTATACTGGGCAG...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TCACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATAGACCACTCTCCATTCTaGTGGCAAGTTCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: SHFRPTLLHAMTHVQTDIDHSPF*WQVLFS
Trigger: TGAGAAAAGAACTTGCCAGCAGAATGGAGAGTGGTC...TATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGAATTGGTAGGGGCACTCTaGAGTTTCTGCTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GRPPGQWSGEVLYMVFFELVGAL*SFCLLK
Trigger: CTTCAGCAAGCAGAAACTGCAGAGTGCCCCTACCAA...TTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp GAAGCCCAGATCTTCCCTGGTCAAGCTGATGGCATTCGTATAACTGAAAGTTGGTACTGGAGCTGGGTATaGAGATGTTGGTATCCCATG +
Preference number: 4 (lower is better)
Translates to: EAQIFPGQADGIRITESWYWSWV*RCWYPM
Trigger: CATGGGATACCAACATCTGCATACCCAGCTCCAGTA...CCAACTTTCAGTTATACGAATGCCATCAGCTTGACCAGGGAAGATCTGGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCTCATTCTTGTTGAACTaGACAATAATCCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGSFLLN*TIIPGL
Trigger: AAGCCCTGGGATTATTGTGCAGTTCAACAAGAATGA...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS-3UTR CCA 90 bp AAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTTCCTGCAGCAAGGGATaGTATAACCCACGACTTCCC +
Preference number: 4 (lower is better)
Translates to: KKLTSCKPWHLPIGCPSSSCSKG*YNPRLP
Trigger: GGGAAGTCGTGGGTTATACCATCCCTTGCTGCAGGA...ACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCATGGTACAACCTGGGTaGATCAGGCAGGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: WSSLKKLTSCKPWHLPIGMVQPG*IRQESH
Trigger: GTGTGACTCCTGCCTGATCCACCCAGGTTGTACCAT...GCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACAAACCGTCAAAATTCTTaGAGCCATCGGAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTNRQNS*SHRSGR
Trigger: TCTTCCACTCCGATGGCTCCAAGAATTTTGACGGTT...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp GAAGCCCAGATCTTCCCTGGTCAAGCTGATGGCATTCGTATAACTGAAAGTTGGTGGGTATGCAGATGTTaGTATCCCATGGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: EAQIFPGQADGIRITESWWVCRC*YPMGRS
Trigger: AGATCTGCCCATGGGATACCAACATCTGCATACCCA...CCAACTTTCAGTTATACGAATGCCATCAGCTTGACCAGGGAAGATCTGGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp GAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCAGATAGGGATGCAGGATaGTGCCCGCCCACTCCACTT +
Preference number: 4 (lower is better)
Translates to: EVLYMVFFEETYFLQALADRDAG*CPPTPL
Trigger: AAGTGGAGTGGGCGGGCACCATCCTGCATCCCTATC...TGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp CTGAAAGTTGGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGCAACCCTTGGGTCTTTaGAGCAGTGATGTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: LKVGEDHQVSGVERFCIWQPLGL*SSDVLN
Trigger: ATTGAGAACATCACTGCTCCAAAGACCCAAGGGTTG...CCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCCAACTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACACAACCCTTGGGTCTTTaGAGCAGTGATGTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTQPLGL*SSDVLN
Trigger: ATTGAGAACATCACTGCTCCAAAGACCCAAGGGTTG...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp GAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCAGGCCAGCGCAACCCTTaGGTCTTTGGAGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: EVLYMVFFEETYFLQALAGQRNP*VFGAVM
Trigger: CATCACTGCTCCAAAGACCCAAGGGTTGCGCTGGCC...TGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGCAGCATCAAGCAGGATaGGGTCATAGTTGGGATGCA +
Preference number: 4 (lower is better)
Translates to: RNDTRTDGYTETLLKECMQHQAG*GHSWDA
Trigger: TGCATCCCAACTATGACCCCATCCTGCTTGATGCTG...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CACACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCCTAGGAGCTTCAGGATaGCGATGTCAGCATCAAGCA +
Preference number: 4 (lower is better)
Translates to: HTASRNDTRTDGYTETLLLGASG*RCQHQA
Trigger: TGCTTGATGCTGACATCGCCATCCTGAAGCTCCTAG...GAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGCAGTGGGTTCCCAGCTaGCACAGAACATGTTATCAG +
Preference number: 4 (lower is better)
Translates to: RNDTRTDGYTETLLKECMQWVPS*HRTCYQ
Trigger: CTGATAACATGTTCTGTGCCAGCTGGGAACCCACTG...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGTCAGCCTACCAGCAATaGAGGTCTACTCACCCTTCA +
Preference number: 4 (lower is better)
Translates to: RNDTRTDGYTETLLKECMSAYQQ*RSTHPS
Trigger: TGAAGGGTGAGTAGACCTCCATTGCTGGTAGGCTGA...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TCACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATAACCAGGTCAGTGGAGTaGAGAGGTTTTGTATATGGT +
Preference number: 4 (lower is better)
Translates to: SHFRPTLLHAMTHVQTDITRSVE*RGFVYG
Trigger: ACCATATACAAAACCTCTCCACTCCACTGACCTGGT...TATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp GAAGCCCAGATCTTCCCTGGTCAAGCTGATGGCATTCGTATAACTGAAAGTTGGAGACCACCAGGTCAGTaGAGTGGAGAGGTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: EAQIFPGQADGIRITESWRPPGQ*SGEVLY
Trigger: ATACAAAACCTCTCCACTCCACTGACCTGGTGGTCT...CCAACTTTCAGTTATACGAATGCCATCAGCTTGACCAGGGAAGATCTGGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp GAAGCCCAGATCTTCCCTGGTCAAGCTGATGGCATTCGTATAACTGAAAGTTGGGACCAGACTGTACTGTaGCCATGTACACAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: EAQIFPGQADGIRITESWDQTVL*PCTQRH
Trigger: ATGCCTTTGTGTACATGGCCACAGTACAGTCTGGTC...CCAACTTTCAGTTATACGAATGCCATCAGCTTGACCAGGGAAGATCTGGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp TATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATGGAGCTGAAGAAAAGTaGGCCCCAACTGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: YMVFFEETYFLQALASSNGAEEK*APTASS
Trigger: GCTGGACGCAGTTGGGGCTCACTTTTCTTCAGCTCC...ATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp CACACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCCAGACGCACTCAATCTaGTCATATTCACAGCACTCC +
Preference number: 4 (lower is better)
Translates to: HTASRNDTRTDGYTETLLQTHSI*SYSQHS
Trigger: GGAGTGCTGTGAATATGATCAGATTGAGTGCGTCTG...GAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp GAAGCCCAGATCTTCCCTGGTCAAGCTGATGGCATTCGTATAACTGAAAGTTGGATGAGGAGCATGCTGTaGTCTCCTCATAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: EAQIFPGQADGIRITESWMRSML*SPHKWH
Trigger: ATGCCATTTATGAGGAGATCACAGCATGCTCCTCAT...CCAACTTTCAGTTATACGAATGCCATCAGCTTGACCAGGGAAGATCTGGGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp TGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCCCTTCTCACCAGGTCTaGAATCTTTGGTTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: WSSLKKLTSCKPWHLPIGPSHQV*NLWFSA
Trigger: TGCCGAGAACCAAAGATTTCAGACCTGGTGAGAAGG...GCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp CTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTCCTTCTCACCAGGTCTaGAATCTTTGGTTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: LHAMTHVQTDIQKHFSRSPSHQV*NLWFSA
Trigger: TGCCGAGAACCAAAGATTTCAGACCTGGTGAGAAGG...ACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp TATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATGCGGCGGTAGAAGGGTaGGATGCACTCATACTGGAG +
Preference number: 4 (lower is better)
Translates to: YMVFFEETYFLQALASSNAAVEG*DALILE
Trigger: CTCCAGTATGAGTGCATCTCACCCTTCTACCGCCGC...ATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp AAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGGTCTTTGGAGCAGTaGTGTTCTCAATTTTCCCGC +
Preference number: 4 (lower is better)
Translates to: KKLTSCKPWHLPIGCPSSGSLEQ*CSQFSR
Trigger: GCGGGAAAATTGAGAACATCACTGCTCCAAAGACCC...ACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACATTCTCAAGGAGTGCATaGGCATGGTTCATTTCATAT +
Preference number: 4 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITFSRSA*AWFISY
Trigger: ATATGAAATGAACCATGCTCATGCACTCCTTGAGAA...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGCACTGCTTCACGCAATaGCACACGTACAGACGGATA +
Preference number: 4 (lower is better)
Translates to: TASRNDTRTDGYTETLLKHCFTQ*HTYRRI
Trigger: TATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTG...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp GGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGAATGGCATTCGTATAACTaGAAGTTGGGGAAGACCACC +
Preference number: 4 (lower is better)
Translates to: GRPPGQWSGEVLYMVFFEWHSYN*KLGKTT
Trigger: GGTGGTCTTCCCCAACTTTCAGTTATACGAATGCCA...TTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp AGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGTGGCATTCGTATAACTaGAAGTTGGGGAAGACCACC +
Preference number: 4 (lower is better)
Translates to: RNLLLASPGIFQLAVLVVWHSYN*KLGKTT
Trigger: GGTGGTCTTCCCCAACTTTCAGTTATACGAATGCCA...CACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp GAAGCCCAGATCTTCCCTGGTCAAGCTGATGGCATTCGTATAACTGAAAGTTGGCATTCTCCTCATTCCTaGAGCAAGGGATGGTATAAC +
Preference number: 4 (lower is better)
Translates to: EAQIFPGQADGIRITESWHSPHS*SKGWYN
Trigger: GTTATACCATCCCTTGCTGCAGGAATGAGGAGAATG...CCAACTTTCAGTTATACGAATGCCATCAGCTTGACCAGGGAAGATCTGGGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp CTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTTTGGTAGGGGCACTCTaGAGTTTCTGCTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LHAMTHVQTDIQKHFSRSLVGAL*SFCLLK
Trigger: CTTCAGCAAGCAGAAACTGCAGAGTGCCCCTACCAA...ACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGTACTGGAGCTGGGTATaGAGATGTTGGTATCCCATG +
Preference number: 4 (lower is better)
Translates to: RNDTRTDGYTETLLKECMYWSWV*RCWYPM
Trigger: CATGGGATACCAACATCTGCATACCCAGCTCCAGTA...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TTTGTAGTTCAGAAGCCAACCCTTATTTTATTAAAATGTGTACAAGAGATGGGGATGTCCTCCTGCTGCTaGCCAGGCGGCGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: FVVQKPTLILLKCVQEMGMSSCC*PGGGRR
Trigger: CCTTCTACCGCCGCCTGGGCAGCAGCAGGAGGACAT...CCCCATCTCTTGTACACATTTTAATAAAATAAGGGTTGGCTTCTGAACTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp TTTGTAGTTCAGAAGCCAACCCTTATTTTATTAAAATGTGTACAAGAGATGGGGGACATGTCCTCCTGCTaGTGCCCAGGCGGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: FVVQKPTLILLKCVQEMGDMSSC*CPGGGR
Trigger: TCTACCGCCGCCTGGGCAGCAGCAGGAGGACATGTC...CCCCATCTCTTGTACACATTTTAATAAAATAAGGGTTGGCTTCTGAACTACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACAAACAACTTTCAGGTCTaGTGTCTTGATCATGGTGAC +
Preference number: 4 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTNNFQV*CLDHGD
Trigger: GTCACCATGATCAAGACAGCAGACCTGAAAGTTGTT...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GAGAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGATGCCATGGTCCTCATaGTGCTCCTCACACAGCAGC +
Preference number: 4 (lower is better)
Translates to: ERFCIWSSLKKLTSCKPWMPWSS*CSSHSS
Trigger: GCTGCTGTGTGAGGAGCAGCATGAGGACCATGGCAT...CCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp AAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGATGCCTCCTGTCTCTaGAGTGCAGATATCAGAAGG +
Preference number: 4 (lower is better)
Translates to: KKLTSCKPWHLPIGCPSSDASCL*SADIRR
Trigger: CCTTCTGATATCTGCACTGCAGAGACAGGAGGCATC...ACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGTGGAGAGCCTGTGGCTaGATGTTTTATCATAGCTCC +
Preference number: 4 (lower is better)
Translates to: RNDTRTDGYTETLLKECMWRACG*MFYHSS
Trigger: GGAGCTATGATAAAACATGCAGCCACAGGCTCTCCA...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTaGAAGCCCTGGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: GEDHQVSGVERFCIWSSLKKLTS*KPWHLP
Trigger: TGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT...CAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGATGTACACAAAGGCATaGACCACATCCCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TASRNDTRTDGYTETLLKMYTKA*TTSQLC
Trigger: GCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACAT...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp GAGAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCAAACCTCTCCTCTCTaGTGCCTTAACCCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: ERFCIWSSLKKLTSCKPWQTSPL*CLNPCG
Trigger: CCCGCAAGGGTTAAGGCAGCAGAGAGGAGAGGTTTG...CCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS-3UTR CCA 90 bp GGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGAAGTGCCAATTTTAGCATaGCGTCCGTTGATAAGCCCA +
Preference number: 4 (lower is better)
Translates to: GRPPGQWSGEVLYMVFFEVPILA*RPLISP
Trigger: TGGGCTTATCAACGGACGCCATGCTAAAATTGGCAC...TTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp GGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGAAGATGTTGGTATCCCATaGGCAGATCTCCAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: GRPPGQWSGEVLYMVFFEDVGIP*ADLQRE
Trigger: TTCCCTTTGGAGATCTGCCCATGGGATACCAACATC...TTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp TATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATGATAGGGATGCAGGATaGTGCCCGCCCACTCCACTT +
Preference number: 4 (lower is better)
Translates to: YMVFFEETYFLQALASSNDRDAG*CPPTPL
Trigger: AAGTGGAGTGGGCGGGCACCATCCTGCATCCCTATC...ATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp AAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTTCTGTAGGCTCTGGATaGTCTTCTCATCCCGGTCAT +
Preference number: 4 (lower is better)
Translates to: KKLTSCKPWHLPIGCPSSSVGSG*SSHPGH
Trigger: ATGACCGGGATGAGAAGACCATCCAGAGCCTACAGA...ACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAAATCTGTAGGCTCTaGATGGTCTTCTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: TASRNDTRTDGYTETLLKEICRL*MVFSSR
Trigger: CCGGGATGAGAAGACCATCCAGAGCCTACAGATTTC...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTCAGCATCAAGCAGGATaGGGTCATAGTTGGGATGCA +
Preference number: 4 (lower is better)
Translates to: LHAMTHVQTDIQKHFSRSQHQAG*GHSWDA
Trigger: TGCATCCCAACTATGACCCCATCCTGCTTGATGCTG...ACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp AAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTCAGCATCAAGCAGGATaGGGTCATAGTTGGGATGCA +
Preference number: 4 (lower is better)
Translates to: KKLTSCKPWHLPIGCPSSQHQAG*GHSWDA
Trigger: TGCATCCCAACTATGACCCCATCCTGCTTGATGCTG...ACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGTCAGCCTACCAGCAATaGAGGTCTACTCACCCTTCA +
Preference number: 4 (lower is better)
Translates to: TASRNDTRTDGYTETLLKSAYQQ*RSTHPS
Trigger: TGAAGGGTGAGTAGACCTCCATTGCTGGTAGGCTGA...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGACTTCTTGCAAGCCCTaGCATCTTCCAATTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RNDTRTDGYTETLLKECMTSCKP*HLPIGC
Trigger: ACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGT...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CACACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAGACCACCAGGTCAGTaGAGTGGAGAGGTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: HTASRNDTRTDGYTETLLRPPGQ*SGEVLY
Trigger: ATACAAAACCTCTCCACTCCACTGACCTGGTGGTCT...GAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp CTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTTTGGCAAGGACGAGATaGGAAGGAGCTGAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LHAMTHVQTDIQKHFSRSLARTR*EGAEEK
Trigger: CTTTTCTTCAGCTCCTTCTCATCTCGTCCTTGCCAA...ACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGTTGGCAAGGACGAGATaGGAAGGAGCTGAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: TASRNDTRTDGYTETLLKLARTR*EGAEEK
Trigger: CTTTTCTTCAGCTCCTTCTCATCTCGTCCTTGCCAA...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp CTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTCAGACGCACTCAATCTaGTCATATTCACAGCACTCC +
Preference number: 4 (lower is better)
Translates to: LHAMTHVQTDIQKHFSRSQTHSI*SYSQHS
Trigger: GGAGTGCTGTGAATATGATCAGATTGAGTGCGTCTG...ACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp CTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTCTACTCACCCTTCACTaGGTTTTGTCCCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LHAMTHVQTDIQKHFSRSLLTLH*VLSLKS
Trigger: TGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAG...ACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR TCA 90 bp TGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGGCATTCGTATAACTaGAAGTTGGGGAAGACCACC +
Preference number: 4 (lower is better)
Translates to: WSSLKKLTSCKPWHLPIGWHSYN*KLGKTT
Trigger: GGTGGTCTTCCCCAACTTTCAGTTATACGAATGCCA...GCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp GAGAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCAGCTCTCTAGAACTTaGGAGCCTCAAAAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: ERFCIWSSLKKLTSCKPWQLSRT*EPQKGP
Trigger: AGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTG...CCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGCATGATATTCCACTCTaGTCCAGGGCAGGCTTCATT +
Preference number: 4 (lower is better)
Translates to: TASRNDTRTDGYTETLLKHDIPL*SRAGFI
Trigger: AATGAAGCCTGCCCTGGAGCAGAGTGGAATATCATG...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGCATTCTCCTCATTCCTaGAGCAAGGGATGGTATAAC +
Preference number: 4 (lower is better)
Translates to: ASRNDTRTDGYTETLLKEHSPHS*SKGWYN
Trigger: GTTATACCATCCCTTGCTGCAGGAATGAGGAGAATG...CTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp GAAGCCCAGATCTTCCCTGGTCAAGCTGATGGCATTCGTATAACTGAAAGTTGGACACTTCTCAAGGAGTaGATGAGCATGGTTCATTTC +
Preference number: 4 (lower is better)
Translates to: EAQIFPGQADGIRITESWTLLKE*MSMVHF
Trigger: GAAATGAACCATGCTCATGCACTCCTTGAGAAGTGT...CCAACTTTCAGTTATACGAATGCCATCAGCTTGACCAGGGAAGATCTGGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp GAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCAACACGCTTGATGATCTaGCCATCGCGGTTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: EVLYMVFFEETYFLQALATRLMI*PSRLSP
Trigger: TGGAGACAACCGCGATGGCCAGATCATCAAGCGTGT...TGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGAACCGTCAAAATTCTTaGAGCCATCGGAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: RNDTRTDGYTETLLKECMNRQNS*SHRSGR
Trigger: TCTTCCACTCCGATGGCTCCAAGAATTTTGACGGTT...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp GCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGAACCGTCAAAATTCTTaGAGCCATCGGAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: ASRNDTRTDGYTETLLKENRQNS*SHRSGR
Trigger: TCTTCCACTCCGATGGCTCCAAGAATTTTGACGGTT...CTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTCCAAAGGGAAGGGCTaGCTTCTTGGTAGGGGCACT +
Preference number: 4 (lower is better)
Translates to: YMVFFEETYFLQALASSNSKGKG*LLGRGT
Trigger: AGTGCCCCTACCAAGAAGCCAGCCCTTCCCTTTGGA...ATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp TGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGGGTATGCAGATGTTaGTATCCCATGGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: WSSLKKLTSCKPWHLPIGWVCRC*YPMGRS
Trigger: AGATCTGCCCATGGGATACCAACATCTGCATACCCA...GCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp AGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGCACTCATACTGGAGCTaGGTATGCAGATGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: RNLLLASPGIFQLAVLVVHSYWS*VCRCWY
Trigger: ATACCAACATCTGCATACCCAGCTCCAGTATGAGTG...CACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp GGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGAACAACCCTTGGGTCTTTaGAGCAGTGATGTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: GRPPGQWSGEVLYMVFFEQPLGL*SSDVLN
Trigger: ATTGAGAACATCACTGCTCCAAAGACCCAAGGGTTG...TTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp TGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCAGACCACCAGGTCAGTaGAGTGGAGAGGTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: WSSLKKLTSCKPWHLPIGRPPGQ*SGEVLY
Trigger: ATACAAAACCTCTCCACTCCACTGACCTGGTGGTCT...GCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp CTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGACCAGACTGTACTGTaGCCATGTACACAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: LHAMTHVQTDIQKHFSRSDQTVL*PCTQRH
Trigger: ATGCCTTTGTGTACATGGCCACAGTACAGTCTGGTC...ACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp TTTGTAGTTCAGAAGCCAACCCTTATTTTATTAAAATGTGTACAAGAGATGGGGTTTTCTGGTACCCATTaGCTGGGCCCCCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: FVVQKPTLILLKCVQEMGFSGTH*LGPQGL
Trigger: CAGACCCTGGGGGCCCAGTCAATGGGTACCAGAAAA...CCCCATCTCTTGTACACATTTTAATAAAATAAGGGTTGGCTTCTGAACTACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp TATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTATCATAGCTCCAGCTaGCCAGTCCCATCAGATGCC +
Preference number: 4 (lower is better)
Translates to: YMVFFEETYFLQALASSNYHSSS*PVPSDA
Trigger: GGCATCTGATGGGACTGGTCAGCTGGAGCTATGATA...ATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp GAGAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCACTGCTTCACGCAATaGCACACGTACAGACGGATA +
Preference number: 4 (lower is better)
Translates to: ERFCIWSSLKKLTSCKPWHCFTQ*HTYRRI
Trigger: TATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTG...CCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp TATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATACTGAGTTTTGTCCCTaGAGTCAGAAGCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: YMVFFEETYFLQALASSNTEFCP*SQKPWH
Trigger: GTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGT...ATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp GCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGCATTTCGGCAGCTCTTaGAGTTTTCAAAGATGGTAC +
Preference number: 4 (lower is better)
Translates to: ASRNDTRTDGYTETLLKEHFGSS*SFQRWY
Trigger: GTACCATCTTTGAAAACTGCAAGAGCTGCCGAAATG...CTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp TATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATGGTAGAAGGGTGAGATaGACTCATACTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: YMVFFEETYFLQALASSNGRRVR*THTGAG
Trigger: CCCAGCTCCAGTATGAGTGCATCTCACCCTTCTACC...ATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp AGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGAACAACTTTCAGGTCTaGTGTCTTGATCATGGTGAC +
Preference number: 4 (lower is better)
Translates to: RNLLLASPGIFQLAVLVVNNFQV*CLDHGD
Trigger: GTCACCATGATCAAGACAGCAGACCTGAAAGTTGTT...CACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGACACTTCTCAAGGAGTaGATGAGCATGGTTCATTTC +
Preference number: 4 (lower is better)
Translates to: RNDTRTDGYTETLLKECMTLLKE*MSMVHF
Trigger: GAAATGAACCATGCTCATGCACTCCTTGAGAAGTGT...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGAAGAAACTTACTTCTTaGAAGCCCTGGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: RNDTRTDGYTETLLKECMKKLTS*KPWHLP
Trigger: TGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGTGCAGTTTTCAAAGATaGTACAACCTGGGTGGATCA +
Preference number: 4 (lower is better)
Translates to: RNDTRTDGYTETLLKECMCSFQR*YNLGGS
Trigger: TGATCCACCCAGGTTGTACCATCTTTGAAAACTGCA...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp TTTGTAGTTCAGAAGCCAACCCTTATTTTATTAAAATGTGTACAAGAGATGGGGGAGGATCCTATGCTCTaGATAGGAGCTGGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: FVVQKPTLILLKCVQEMGEDPML*IGAGRS
Trigger: CGAGCGGCCAGCTCCTATCCAGAGCATAGGATCCTC...CCCCATCTCTTGTACACATTTTAATAAAATAAGGGTTGGCTTCTGAACTACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp AAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTCACTCATACTGGAGCTaGGTATGCAGATGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: KKLTSCKPWHLPIGCPSSHSYWS*VCRCWY
Trigger: ATACCAACATCTGCATACCCAGCTCCAGTATGAGTG...ACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGACCAGGTCAGTGGAGTaGAGAGGTTTTGTATATGGT +
Preference number: 4 (lower is better)
Translates to: TASRNDTRTDGYTETLLKTRSVE*RGFVYG
Trigger: ACCATATACAAAACCTCTCCACTCCACTGACCTGGT...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp TGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCACCAGGTCAGTGGAGTaGAGAGGTTTTGTATATGGT +
Preference number: 4 (lower is better)
Translates to: WSSLKKLTSCKPWHLPIGTRSVE*RGFVYG
Trigger: ACCATATACAAAACCTCTCCACTCCACTGACCTGGT...GCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR CAA 72 bp TGGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTaGTATATGGTCTTCTTTGAAGAAACTTACTTCTTG +
Preference number: 4 (lower is better)
Translates to: WGRPPGQWSGEV*YMVFFEETYFL
Trigger: CAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp CTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTCATTTCGGCAGCTCTTaGAGTTTTCAAAGATGGTAC +
Preference number: 4 (lower is better)
Translates to: LHAMTHVQTDIQKHFSRSHFGSS*SFQRWY
Trigger: GTACCATCTTTGAAAACTGCAAGAGCTGCCGAAATG...ACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp CTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTAACAACTTTCAGGTCTaGTGTCTTGATCATGGTGAC +
Preference number: 4 (lower is better)
Translates to: LHAMTHVQTDIQKHFSRSNNFQV*CLDHGD
Trigger: GTCACCATGATCAAGACAGCAGACCTGAAAGTTGTT...ACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR GCA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGACACTTCTCAAGGAGTaGATGAGCATGGTTCATTTC +
Preference number: 4 (lower is better)
Translates to: TASRNDTRTDGYTETLLKTLLKE*MSMVHF
Trigger: GAAATGAACCATGCTCATGCACTCCTTGAGAAGTGT...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp AAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTTGCAGTTTTCAAAGATaGTACAACCTGGGTGGATCA +
Preference number: 4 (lower is better)
Translates to: KKLTSCKPWHLPIGCPSSCSFQR*YNLGGS
Trigger: TGATCCACCCAGGTTGTACCATCTTTGAAAACTGCA...ACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGTGCAGTTTTCAAAGATaGTACAACCTGGGTGGATCA +
Preference number: 4 (lower is better)
Translates to: TASRNDTRTDGYTETLLKCSFQR*YNLGGS
Trigger: TGATCCACCCAGGTTGTACCATCTTTGAAAACTGCA...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CCA 90 bp GAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCAGATGTTGGTATCCCATaGGCAGATCTCCAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: EVLYMVFFEETYFLQALADVGIP*ADLQRE
Trigger: TTCCCTTTGGAGATCTGCCCATGGGATACCAACATC...TGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp GAGAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGTGGGTATGCAGATGTTaGTATCCCATGGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: ERFCIWSSLKKLTSCKPWWVCRC*YPMGRS
Trigger: AGATCTGCCCATGGGATACCAACATCTGCATACCCA...CCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp TATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATCAGTGGGTTCCCAGCTaGCACAGAACATGTTATCAG +
Preference number: 4 (lower is better)
Translates to: YMVFFEETYFLQALASSNQWVPS*HRTCYQ
Trigger: CTGATAACATGTTCTGTGCCAGCTGGGAACCCACTG...ATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp TATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTCAGCCTACCAGCAATaGAGGTCTACTCACCCTTCA +
Preference number: 4 (lower is better)
Translates to: YMVFFEETYFLQALASSNSAYQQ*RSTHPS
Trigger: TGAAGGGTGAGTAGACCTCCATTGCTGGTAGGCTGA...ATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp GAGAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGAGACCACCAGGTCAGTaGAGTGGAGAGGTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: ERFCIWSSLKKLTSCKPWRPPGQ*SGEVLY
Trigger: ATACAAAACCTCTCCACTCCACTGACCTGGTGGTCT...CCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
3UTR CAA 72 bp GTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTaGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTT +
Preference number: 4 (lower is better)
Translates to: VSGVERFCIWSS*KKLTSCKPWHL
Trigger: AAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp GAGAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATTCTCCTCATTCCTaGAGCAAGGGATGGTATAAC +
Preference number: 4 (lower is better)
Translates to: ERFCIWSSLKKLTSCKPWHSPHS*SKGWYN
Trigger: GTTATACCATCCCTTGCTGCAGGAATGAGGAGAATG...CCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp TATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATGACTGTGTACTCTCTTaGCAAGGACGAGATGAGAAG +
Preference number: 4 (lower is better)
Translates to: YMVFFEETYFLQALASSNDCVLS*QGRDEK
Trigger: CTTCTCATCTCGTCCTTGCCAAGAGAGTACACAGTC...ATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp TTTGTAGTTCAGAAGCCAACCCTTATTTTATTAAAATGTGTACAAGAGATGGGGGGGTCTTTGGAGCAGTaGTGTTCTCAATTTTCCCGC +
Preference number: 4 (lower is better)
Translates to: FVVQKPTLILLKCVQEMGGSLEQ*CSQFSR
Trigger: GCGGGAAAATTGAGAACATCACTGCTCCAAAGACCC...CCCCATCTCTTGTACACATTTTAATAAAATAAGGGTTGGCTTCTGAACTACAAA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp TTTGTAGTTCAGAAGCCAACCCTTATTTTATTAAAATGTGTACAAGAGATGGGGTTGGTAGGGGCACTCTaGAGTTTCTGCTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: FVVQKPTLILLKCVQEMGLVGAL*SFCLLK
Trigger: CTTCAGCAAGCAGAAACTGCAGAGTGCCCCTACCAA...CCCCATCTCTTGTACACATTTTAATAAAATAAGGGTTGGCTTCTGAACTACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000619888.5
ENST00000622144.4
CDS-3UTR GCA 90 bp GAGAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGAAGAAACTTACTTCTTaGAAGCCCTGGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: ERFCIWSSLKKLTSCKPWKKLTS*KPWHLP
Trigger: TGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT...CCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CCA 90 bp TTTGTAGTTCAGAAGCCAACCCTTATTTTATTAAAATGTGTACAAGAGATGGGGGAGATGCACTCATACTaGAGCTGGGTATGCAGATGT +
Preference number: 4 (lower is better)
Translates to: FVVQKPTLILLKCVQEMGEMHSY*SWVCRC
Trigger: ACATCTGCATACCCAGCTCCAGTATGAGTGCATCTC...CCCCATCTCTTGTACACATTTTAATAAAATAAGGGTTGGCTTCTGAACTACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000619888.5
ENST00000622144.4
CDS-3UTR TCA 90 bp TTTGTAGTTCAGAAGCCAACCCTTATTTTATTAAAATGTGTACAAGAGATGGGGTTCTCAAGGAGTGCATaGGCATGGTTCATTTCATAT +
Preference number: 4 (lower is better)
Translates to: FVVQKPTLILLKCVQEMGFSRSA*AWFISY
Trigger: ATATGAAATGAACCATGCTCATGCACTCCTTGAGAA...CCCCATCTCTTGTACACATTTTAATAAAATAAGGGTTGGCTTCTGAACTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619888.5
ENST00000622144.4
CDS CCA 90 bp CCTCTCCTCTCTGCTGCCTTAACCCTTGCGGGGCCCCGGGAGGTGTaGCCACGCCTGGAGACCCGCGGACGGCGGCTGCAAAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: PLLSAALTLAGPREV*PRLETRGRRLQRKL
Trigger: CAGCTTCCTTTGCAGCCGCCGTCCGCGGGTCTCCAGGCGTGGCCACACCTCCCGGGGCCCCGCAAGGGTTAAGGCAGCAGAGAGGAGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS CCA 90 bp GAGCCCCAACTGCGTCCAGCAACCCAGCTCCATCCTTGCCGCGGCTaGTGCCCGAGCGTCTACTGGGGAGGGAGAGGAGGGACCCAGGGA +
Preference number: 5 (lower is better)
Translates to: EPQLRPATQLHPCRG*CPSVYWGGRGGTQG
Trigger: TCCCTGGGTCCCTCCTCTCCCTCCCCAGTAGACGCTCGGGCACCAGCCGCGGCAAGGATGGAGCTGGGTTGCTGGACGCAGTTGGGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527605.5
ENST00000615849.4
CDS GCA 90 bp CCACCTTCAGCCAGAGCGACGTCAGCCCAAACCTCTCCTCTCTGCTaGCTTAACCCTTGCGGGGCCCCGGGAGGTGTGGCCACGCCTGGA +
Preference number: 5 (lower is better)
Translates to: PPSARATSAQTSPLC*LNPCGAPGGVATPG
Trigger: TCCAGGCGTGGCCACACCTCCCGGGGCCCCGCAAGGGTTAAGGCAGCAGAGAGGAGAGGTTTGGGCTGACGTCGCTCTGGCTGAAGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS GCA 90 bp CCAGGGCACCGCTGCAGACTAGGAACCACGCTCCCTTGTGTAGGCTaGCGTCATGCACCCCGCTGGTCCTCCTGTAGATGGCTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: PGHRCRLGTTLPCVG*RHAPRWSSCRWLPA
Trigger: GGCAGGCAGCCATCTACAGGAGGACCAGCGGGGTGCATGACGGCAGCCTACACAAGGGAGCGTGGTTCCTAGTCTGCAGCGGTGCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 90 bp GAACCACCTTCAGCCAGAGCGACGTCAGCCCAAACCTCTCCTCTCTaGTGCCTTAACCCTTGCGGGGCCCCGGGAGGTGTGGCCACGCCT +
Preference number: 5 (lower is better)
Translates to: EPPSARATSAQTSPL*CLNPCGAPGGVATP
Trigger: AGGCGTGGCCACACCTCCCGGGGCCCCGCAAGGGTTAAGGCAGCAGAGAGGAGAGGTTTGGGCTGACGTCGCTCTGGCTGAAGGTGGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS GCA 90 bp GCTCCAGCTGACCAGTCCCATCAGATGCCAGCGTGGCTCAGGAGATaGTCGTCCCGGGAAGGACACAGCCGCGATGCCTCCTGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: APADQSHQMPAWLRR*SSREGHSRDASCLC
Trigger: GCAGAGACAGGAGGCATCGCGGCTGTGTCCTTCCCGGGACGAGCATCTCCTGAGCCACGCTGGCATCTGATGGGACTGGTCAGCTGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 90 bp CCTTGTGTAGGCTGCCGTCATGCACCCCGCTGGTCCTCCTGTAGATaGCTGCCTGCCACGGCCAGCGCAACCCTTGGGTCTTTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: PCVGCRHAPRWSSCR*LPATASATLGSLEQ
Trigger: CTGCTCCAAAGACCCAAGGGTTGCGCTGGCCGTGGCAGGCAGCCATCTACAGGAGGACCAGCGGGGTGCATGACGGCAGCCTACACAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 90 bp CTAGGAACCACGCTCCCTTGTGTAGGCTGCCGTCATGCACCCCGCTaGTCCTCCTGTAGATGGCTGCCTGCCACGGCCAGCGCAACCCTT +
Preference number: 5 (lower is better)
Translates to: LGTTLPCVGCRHAPR*SSCRWLPATASATL
Trigger: AAGGGTTGCGCTGGCCGTGGCAGGCAGCCATCTACAGGAGGACCAGCGGGGTGCATGACGGCAGCCTACACAAGGGAGCGTGGTTCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS TCA 90 bp AGCGGGAGCTCGGGTTTCAGCTCGCCAGGCTCTCCCATCCTCATCTaGGGGGAACCACCTTCAGCCAGAGCGACGTCAGCCCAAACCTCT +
Preference number: 5 (lower is better)
Translates to: SGSSGFSSPGSPILI*GEPPSARATSAQTS
Trigger: AGAGGTTTGGGCTGACGTCGCTCTGGCTGAAGGTGGTTCCCCTCAGATGAGGATGGGAGAGCCTGGCGAGCTGAAACCCGAGCTCCCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS GCA 90 bp CCCGCCCACTCCACTTCCCAGTCCTCAGACATGTCCTCCTGCTGCTaGCCAGGCGGCGGTAGAAGGGTGAGATGCACTCATACTGGAGCT +
Preference number: 5 (lower is better)
Translates to: PAHSTSQSSDMSSCC*PGGGRRVRCTHTGA
Trigger: AGCTCCAGTATGAGTGCATCTCACCCTTCTACCGCCGCCTGGGCAGCAGCAGGAGGACATGTCTGAGGACTGGGAAGTGGAGTGGGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 90 bp AGTGGGCAGCCACCACCACAGTGCGCTCATTCACCAGGGCACCGCTaGAGACTAGGAACCACGCTCCCTTGTGTAGGCTGCCGTCATGCA +
Preference number: 5 (lower is better)
Translates to: SGQPPPQCAHSPGHR*RLGTTLPCVGCRHA
Trigger: TGCATGACGGCAGCCTACACAAGGGAGCGTGGTTCCTAGTCTGCAGCGGTGCCCTGGTGAATGAGCGCACTGTGGTGGTGGCTGCCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 90 bp GGGCTCCTCACGTCTGCCAGGACATTCCAGCCAGCCACAGTGATGTaGGACTCCTGGAAGGAAGTGCTGAGATCCCGACTGGCAGCGAGG +
Preference number: 5 (lower is better)
Translates to: GLLTSARTFQPATVM*DSWKEVLRSRLAAR
Trigger: CCTCGCTGCCAGTCGGGATCTCAGCACTTCCTTCCAGGAGTCCCACATCACTGTGGCTGGCTGGAATGTCCTGGCAGACGTGAGGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 90 bp CTCGTCCCGGGAAGGACACAGCCGCGATGCCTCCTGTCTCTGCAGTaGAGATATCAGAAGGGGCAGTGGGTTCCCAGCTGGCACAGAACA +
Preference number: 5 (lower is better)
Translates to: LVPGRTQPRCLLSLQ*RYQKGQWVPSWHRT
Trigger: TGTTCTGTGCCAGCTGGGAACCCACTGCCCCTTCTGATATCTGCACTGCAGAGACAGGAGGCATCGCGGCTGTGTCCTTCCCGGGACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 90 bp AGATGCTCGTCCCGGGAAGGACACAGCCGCGATGCCTCCTGTCTCTaGAGTGCAGATATCAGAAGGGGCAGTGGGTTCCCAGCTGGCACA +
Preference number: 5 (lower is better)
Translates to: RCSSREGHSRDASCL*SADIRRGSGFPAGT
Trigger: TGTGCCAGCTGGGAACCCACTGCCCCTTCTGATATCTGCACTGCAGAGACAGGAGGCATCGCGGCTGTGTCCTTCCCGGGACGAGCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 90 bp ACGTCTGCCAGGACATTCCAGCCAGCCACAGTGATGTGGGACTCCTaGAAGGAAGTGCTGAGATCCCGACTGGCAGCGAGGCAGATGGGC +
Preference number: 5 (lower is better)
Translates to: TSARTFQPATVMWDS*KEVLRSRLAARQMG
Trigger: GCCCATCTGCCTCGCTGCCAGTCGGGATCTCAGCACTTCCTTCCAGGAGTCCCACATCACTGTGGCTGGCTGGAATGTCCTGGCAGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 90 bp CCCAGAGCGCAGTGTGTCGTTCTTGAAGCCAGGGCTCCTCACGTCTaGCAGGACATTCCAGCCAGCCACAGTGATGTGGGACTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: PRAQCVVLEARAPHV*QDIPASHSDVGLLE
Trigger: TTCCAGGAGTCCCACATCACTGTGGCTGGCTGGAATGTCCTGGCAGACGTGAGGAGCCCTGGCTTCAAGAACGACACACTGCGCTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 90 bp TGGAAGGAAGTGCTGAGATCCCGACTGGCAGCGAGGCAGATGGGCTaGACTCGGGTGCTGATACGGGCCTTGTCTAGGAGCTTCAGGATG +
Preference number: 5 (lower is better)
Translates to: WKEVLRSRLAARQMG*TRVLIRALSRSFRM
Trigger: CATCCTGAAGCTCCTAGACAAGGCCCGTATCAGCACCCGAGTCCAGCCCATCTGCCTCGCTGCCAGTCGGGATCTCAGCACTTCCTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp TCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCAACCCAGCTCCATCCTaGCCGCGGCTGGTGCCCGAG +
Preference number: 5 (lower is better)
Translates to: SLSFVPEVRSPGTAKFTGNPAPS*PRLVPE
Trigger: CTCGGGCACCAGCCGCGGCAAGGATGGAGCTGGGTT...GCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS CCA 90 bp TCTGCTGTCTTGATCATGGTGACCTTCCCCAGGTCAGTAACACAGTaGGCAGCCACCACCACAGTGCGCTCATTCACCAGGGCACCGCTG +
Preference number: 5 (lower is better)
Translates to: SAVLIMVTFPRSVTQ*AATTTVRSFTRAPL
Trigger: CAGCGGTGCCCTGGTGAATGAGCGCACTGTGGTGGTGGCTGCCCACTGTGTTACTGACCTGGGGAAGGTCACCATGATCAAGACAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 90 bp TGTTTTATCATAGCTCCAGCTGACCAGTCCCATCAGATGCCAGCGTaGCTCAGGAGATGCTCGTCCCGGGAAGGACACAGCCGCGATGCC +
Preference number: 5 (lower is better)
Translates to: CFIIAPADQSHQMPA*LRRCSSREGHSRDA
Trigger: GGCATCGCGGCTGTGTCCTTCCCGGGACGAGCATCTCCTGAGCCACGCTGGCATCTGATGGGACTGGTCAGCTGGAGCTATGATAAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACTTAGCATGGCGTCCGTaGATAAGCCCAGGGCCCCCT +
Preference number: 5 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHLAWRP*ISPGPP
Trigger: AGGGGGCCCTGGGCTTATCAACGGACGCCATGCTAA...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp CCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTTAGCATGGCGTCCGTaGATAAGCCCAGGGCCCCCT +
Preference number: 5 (lower is better)
Translates to: PIGCPSSGRGISLPAMEVLAWRP*ISPGPP
Trigger: AGGGGGCCCTGGGCTTATCAACGGACGCCATGCTAA...GACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 90 bp GCCACATCGCATGCAGTCTCCTCCGTACCAGCCTGCTCGGCACTCTaGACAGTAGAACCCCTTCACATAGAAGTCATCCAAGGTACCCCC +
Preference number: 5 (lower is better)
Translates to: ATSHAVSSVPACSAL*TVEPLHIEVIQGTP
Trigger: GGGGGTACCTTGGATGACTTCTATGTGAAGGGGTTCTACTGTGCAGAGTGCCGAGCAGGCTGGTACGGAGGAGACTGCATGCGATGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000534803.1
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 90 bp GGAGCATGGCATGCAGTCTCCTCCGTACCAGCCTGCTCGGCACTCTaGACAGTAGAACCCCTTCACATAGAAGTCATCCAAGGTACCCCC +
Preference number: 5 (lower is better)
Translates to: GAWHAVSSVPACSAL*TVEPLHIEVIQGTP
Trigger: GGGGGTACCTTGGATGACTTCTATGTGAAGGGGTTCTACTGTGCAGAGTGCCGAGCAGGCTGGTACGGAGGAGACTGCATGCCATGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529303.1
ENST00000615849.4
CDS CCA 90 bp GAGCCATCGGAGTGGAAGAGGACGTGGAGTGAGGATCCTATGCTCTaGATAGGAGCTGGCCGCTCGTTGCCACAGACACGCTTGATGATC +
Preference number: 5 (lower is better)
Translates to: EPSEWKRTWSEDPML*IGAGRSLPQTRLMI
Trigger: GATCATCAAGCGTGTCTGTGGCAACGAGCGGCCAGCTCCTATCCAGAGCATAGGATCCTCACTCCACGTCCTCTTCCACTCCGATGGCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000534803.1
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACAAACCCAGCTCCATCCTaGCCGCGGCTGGTGCCCGAG +
Preference number: 5 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTNPAPS*PRLVPE
Trigger: CTCGGGCACCAGCCGCGGCAAGGATGGAGCTGGGTT...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATTAGCATGGCGTCCGTaGATAAGCCCAGGGCCCCCT +
Preference number: 5 (lower is better)
Translates to: LLASPGIFQLAVLVVDAALAWRP*ISPGPP
Trigger: AGGGGGCCCTGGGCTTATCAACGGACGCCATGCTAA...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp GACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCCAGCTCTGCTGCCGGCCAGCGCAACCCTaGGGTCTTTGGAGCAGTGAT +
Preference number: 5 (lower is better)
Translates to: DCTVAMYTKACTTSQLCCRPAQP*GLWSSD
Trigger: ATCACTGCTCCAAAGACCCAAGGGTTGCGCTGGCCG...GCAGCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp CCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCCACCAGGGAGGCTGGTaGCATGTGAATCCACAGGGA +
Preference number: 5 (lower is better)
Translates to: PIGCPSSGRGISLPAMEVHQGGW*HVNPQG
Trigger: TCCCTGTGGATTCACATGCAACCAGCCTCCCTGGTG...GACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS GCA 90 bp TCGCAGAACCTGGCCACATCGCATGCAGTCTCCTCCGTACCAGCCTaGTCGGCACTCTGCACAGTAGAACCCCTTCACATAGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: SQNLATSHAVSSVPA*SALCTVEPLHIEVI
Trigger: GATGACTTCTATGTGAAGGGGTTCTACTGTGCAGAGTGCCGAGCAGGCTGGTACGGAGGAGACTGCATGCGATGTGGCCAGGTTCTGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000534803.1
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 90 bp CCTGTAGATGGCTGCCTGCCACGGCCAGCGCAACCCTTGGGTCTTTaGAGCAGTGATGTTCTCAATTTTCCCGCAGATAGGGATGCAGGA +
Preference number: 5 (lower is better)
Translates to: PVDGCLPRPAQPLGL*SSDVLNFPADRDAG
Trigger: TCCTGCATCCCTATCTGCGGGAAAATTGAGAACATCACTGCTCCAAAGACCCAAGGGTTGCGCTGGCCGTGGCAGGCAGCCATCTACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp CCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCATCTGGCCATCGCGGTaGTCTCCATCACGAACCTCA +
Preference number: 5 (lower is better)
Translates to: PIGCPSSGRGISLPAMEVIWPSR*SPSRTS
Trigger: TGAGGTTCGTGATGGAGACAACCGCGATGGCCAGAT...GACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp AAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTATTGCCACAGACACGCTaGATGATCTGGCCATCGCGG +
Preference number: 5 (lower is better)
Translates to: KPWHLPIGCPSSGRGISLLPQTR*MIWPSR
Trigger: CCGCGATGGCCAGATCATCAAGCGTGTCTGTGGCAA...TAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp TCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGATCTTCCCTGGGAGCTGGCCGCTCGTaGCCACAGACACGCTTGATG +
Preference number: 5 (lower is better)
Translates to: SLELESLKRGLMKPRSSLGAGRS*PQTRLM
Trigger: CATCAAGCGTGTCTGTGGCAACGAGCGGCCAGCTCC...CAGGGAAGATCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp CCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCATTTTCTGGTACCCATaGACTGGGCCCCCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: PIGCPSSGRGISLPAMEVIFWYP*TGPPGS
Trigger: AGACCCTGGGGGCCCAGTCAATGGGTACCAGAAAAT...GACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp TCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCTTAGCATGGCGTCCGTaGATAAGCCCAGGGCCCCCT +
Preference number: 5 (lower is better)
Translates to: SLSFVPEVRSPGTAKFTGLAWRP*ISPGPP
Trigger: AGGGGGCCCTGGGCTTATCAACGGACGCCATGCTAA...GCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCGGAAGGGCTGGCTTCTaGGTAGGGGCACTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGGRAGF*VGALCS
Trigger: ACTGCAGAGTGCCCCTACCAAGAAGCCAGCCCTTCC...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp TCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCGGAAGGGCTGGCTTCTaGGTAGGGGCACTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: SLSFVPEVRSPGTAKFTGGRAGF*VGALCS
Trigger: ACTGCAGAGTGCCCCTACCAAGAAGCCAGCCCTTCC...GCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCCGGCCAGCGCAACCCTaGGGTCTTTGGAGCAGTGAT +
Preference number: 5 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGRPAQP*GLWSSD
Trigger: ATCACTGCTCCAAAGACCCAAGGGTTGCGCTGGCCG...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGAACCACGCTCCCTaGTGTAGGCTGCCGTCATGC +
Preference number: 5 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWRNHAP*CRLPSC
Trigger: GCATGACGGCAGCCTACACAAGGGAGCGTGGTTCCT...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp GCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGAGGTCTACTCACGTGCTGATACGGGCCTaGTCTAGGAGCTTCAGGATG +
Preference number: 5 (lower is better)
Translates to: AVLVVDAASAYQQWRSTHVLIRA*SRSFRM
Trigger: CATCCTGAAGCTCCTAGACAAGGCCCGTATCAGCAC...GTGAGTAGACCTCCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS TCA 90 bp ACCGTCAAAATTCTTGGAGCCATCGGAGTGGAAGAGGACGTGGAGTaGGGATCCTATGCTCTGGATAGGAGCTGGCCGCTCGTTGCCACA +
Preference number: 5 (lower is better)
Translates to: TVKILGAIGVEEDVE*GSYALDRSWPLVAT
Trigger: TGTGGCAACGAGCGGCCAGCTCCTATCCAGAGCATAGGATCCTCACTCCACGTCCTCTTCCACTCCGATGGCTCCAAGAATTTTGACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000534803.1
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS TCA 90 bp CAGAAGGGGCAGTGGGTTCCCAGCTGGCACAGAACATGTTATCAGTaGCACTCACTGGGATGCCATGGTCCTCATGCTGCTCCTCACACA +
Preference number: 5 (lower is better)
Translates to: QKGQWVPSWHRTCYQ*HSLGCHGPHAAPHT
Trigger: TGTGTGAGGAGCAGCATGAGGACCATGGCATCCCAGTGAGTGTCACTGATAACATGTTCTGTGCCAGCTGGGAACCCACTGCCCCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 90 bp AACCTGGGTGGATCAGGCAGGAGTCACACTCATTCTCCTCATTCCTaGAGCAAGGGATGGTATAACCCACGACTTCCCTCTTTCCGGGGC +
Preference number: 5 (lower is better)
Translates to: NLGGSGRSHTHSPHS*SKGWYNPRLPSFRG
Trigger: GCCCCGGAAAGAGGGAAGTCGTGGGTTATACCATCCCTTGCTGCAGGAATGAGGAGAATGAGTGTGACTCCTGCCTGATCCACCCAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000527605.5
ENST00000529303.1
ENST00000534803.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 90 bp CCAAAGGGAAGGGCTGGCTTCTTGGTAGGGGCACTCTGCAGTTTCTaGTTGCTGAAGGCCGCTGAGTATAGCTGGTGTAATGGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: PKGRAGFLVGALCSF*LLKAAEYSWCNGVS
Trigger: GGAGACACCATTACACCAGCTATACTCAGCGGCCTTCAGCAAGCAGAAACTGCAGAGTGCCCCTACCAAGAAGCCAGCCCTTCCCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 90 bp AACATGTTATCAGTGACACTCACTGGGATGCCATGGTCCTCATGCTaGTCCTCACACAGCAGCGAGTCCACCACACTGACCACCCCAGAG +
Preference number: 5 (lower is better)
Translates to: NMLSVTLTGMPWSSC*SSHSSESTTLTTPE
Trigger: CTCTGGGGTGGTCAGTGTGGTGGACTCGCTGCTGTGTGAGGAGCAGCATGAGGACCATGGCATCCCAGTGAGTGTCACTGATAACATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 90 bp CAGAACATGTTATCAGTGACACTCACTGGGATGCCATGGTCCTCATaGTGCTCCTCACACAGCAGCGAGTCCACCACACTGACCACCCCA +
Preference number: 5 (lower is better)
Translates to: QNMLSVTLTGMPWSS*CSSHSSESTTLTTP
Trigger: TGGGGTGGTCAGTGTGGTGGACTCGCTGCTGTGTGAGGAGCAGCATGAGGACCATGGCATCCCAGTGAGTGTCACTGATAACATGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 90 bp CAGCTGGCACAGAACATGTTATCAGTGACACTCACTGGGATGCCATaGTCCTCATGCTGCTCCTCACACAGCAGCGAGTCCACCACACTG +
Preference number: 5 (lower is better)
Translates to: QLAQNMLSVTLTGMP*SSCCSSHSSESTTL
Trigger: CAGTGTGGTGGACTCGCTGCTGTGTGAGGAGCAGCATGAGGACCATGGCATCCCAGTGAGTGTCACTGATAACATGTTCTGTGCCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 90 bp AGTGGGTTCCCAGCTGGCACAGAACATGTTATCAGTGACACTCACTaGGATGCCATGGTCCTCATGCTGCTCCTCACACAGCAGCGAGTC +
Preference number: 5 (lower is better)
Translates to: SGFPAGTEHVISDTH*DAMVLMLLLTQQRV
Trigger: GACTCGCTGCTGTGTGAGGAGCAGCATGAGGACCATGGCATCCCAGTGAGTGTCACTGATAACATGTTCTGTGCCAGCTGGGAACCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp GACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCCAGCTCTGCTGCATCTGGCCATCGCGGTaGTCTCCATCACGAACCTCA +
Preference number: 5 (lower is better)
Translates to: DCTVAMYTKACTTSQLCCIWPSR*SPSRTS
Trigger: TGAGGTTCGTGATGGAGACAACCGCGATGGCCAGAT...GCAGCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGTTGCCACAGACACGCTaGATGATCTGGCCATCGCGG +
Preference number: 5 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWLPQTR*MIWPSR
Trigger: CCGCGATGGCCAGATCATCAAGCGTGTCTGTGGCAA...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTCTGCAGTTTCTGCTaGCTGAAGGCCGCTGAGTAT +
Preference number: 5 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISLCSFC*LKAAEY
Trigger: ATACTCAGCGGCCTTCAGCAAGCAGAAACTGCAGAG...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp AGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACACGGCCAGCGCAACCCTaGGGTCTTTGGAGCAGTGAT +
Preference number: 5 (lower is better)
Translates to: RSTHPSLSFVPEVRSPGTRPAQP*GLWSSD
Trigger: ATCACTGCTCCAAAGACCCAAGGGTTGCGCTGGCCG...TGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp GGAAAAGGACCAGACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCAGGAACCACGCTCCCTaGTGTAGGCTGCCGTCATGC +
Preference number: 5 (lower is better)
Translates to: GKGPDCTVAMYTKACTTSRNHAP*CRLPSC
Trigger: GCATGACGGCAGCCTACACAAGGGAGCGTGGTTCCT...GGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTCTGGTCCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCAGTGCTGATACGGGCCTaGTCTAGGAGCTTCAGGATG +
Preference number: 5 (lower is better)
Translates to: LLASPGIFQLAVLVVDAAVLIRA*SRSFRM
Trigger: CATCCTGAAGCTCCTAGACAAGGCCCGTATCAGCAC...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 90 bp GGCAGATCTCCAAAGGGAAGGGCTGGCTTCTTGGTAGGGGCACTCTaGAGTTTCTGCTTGCTGAAGGCCGCTGAGTATAGCTGGTGTAAT +
Preference number: 5 (lower is better)
Translates to: GRSPKGRAGFLVGAL*SFCLLKAAEYSWCN
Trigger: ATTACACCAGCTATACTCAGCGGCCTTCAGCAAGCAGAAACTGCAGAGTGCCCCTACCAAGAAGCCAGCCCTTCCCTTTGGAGATCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 90 bp TCAGGCAGGAGTCACACTCATTCTCCTCATTCCTGCAGCAAGGGATaGTATAACCCACGACTTCCCTCTTTCCGGGGCAGACGCACTCAA +
Preference number: 5 (lower is better)
Translates to: SGRSHTHSPHSCSKG*YNPRLPSFRGRRTQ
Trigger: TTGAGTGCGTCTGCCCCGGAAAGAGGGAAGTCGTGGGTTATACCATCCCTTGCTGCAGGAATGAGGAGAATGAGTGTGACTCCTGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000527605.5
ENST00000529303.1
ENST00000534803.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 90 bp TGGAAACCGTCAAAATTCTTGGAGCCATCGGAGTGGAAGAGGACGTaGAGTGAGGATCCTATGCTCTGGATAGGAGCTGGCCGCTCGTTG +
Preference number: 5 (lower is better)
Translates to: WKPSKFLEPSEWKRT*SEDPMLWIGAGRSL
Trigger: CAACGAGCGGCCAGCTCCTATCCAGAGCATAGGATCCTCACTCCACGTCCTCTTCCACTCCGATGGCTCCAAGAATTTTGACGGTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000534803.1
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 90 bp ATGCAGATGTTGGTATCCCATGGGCAGATCTCCAAAGGGAAGGGCTaGCTTCTTGGTAGGGGCACTCTGCAGTTTCTGCTTGCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: MQMLVSHGQISKGKG*LLGRGTLQFLLAEG
Trigger: GCCTTCAGCAAGCAGAAACTGCAGAGTGCCCCTACCAAGAAGCCAGCCCTTCCCTTTGGAGATCTGCCCATGGGATACCAACATCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 90 bp CAAGTTCAAGTCAGCCAAGGCCAGAGATGGAGAAGGGCAGGATTGTaGAAAAGACAAAGGGCCCTTCCACTGGAGCCTGCTGTAACTGGC +
Preference number: 5 (lower is better)
Translates to: QVQVSQGQRWRRAGL*KRQRALPLEPAVTG
Trigger: GCCAGTTACAGCAGGCTCCAGTGGAAGGGCCCTTTGTCTTTTCCACAATCCTGCCCTTCTCCATCTCTGGCCTTGGCTGACTTGAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS-3UTR CAA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAACAAAATCTGACCCTTaGGGGCTCGCAGAACCTGGC +
Preference number: 5 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQTKSDP*GLAEPG
Trigger: GCCAGGTTCTGCGAGCCCCAAAGGGTCAGATTTTGT...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGACAAAATCTGACCCTTaGGGGCTCGCAGAACCTGGC +
Preference number: 5 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWTKSDP*GLAEPG
Trigger: GCCAGGTTCTGCGAGCCCCAAAGGGTCAGATTTTGT...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp CACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCTCTGACGCCTTGATCTaGGACTTCCCAGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: HPSLSFVPEVRSPGTAKFSDALI*DFPASR
Trigger: TCTGGAGGCTGGGAAGTCCAAGATCAAGGCGTCAGA...GAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622144.4
CDS-3UTR CAA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATTTTCTGGTACCCATaGACTGGGCCCCCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQIFWYP*TGPPGS
Trigger: AGACCCTGGGGGCCCAGTCAATGGGTACCAGAAAAT...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp GACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCCAGCTCTGCTGCCTCTGCAGTTTCTGCTaGCTGAAGGCCGCTGAGTAT +
Preference number: 5 (lower is better)
Translates to: DCTVAMYTKACTTSQLCCLCSFC*LKAAEY
Trigger: ATACTCAGCGGCCTTCAGCAAGCAGAAACTGCAGAG...GCAGCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp GGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGGGAAGGGCTGGCTTCTaGGTAGGGGCACTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: GEDHQVSGVERFCIWSSLGRAGF*VGALCS
Trigger: ACTGCAGAGTGCCCCTACCAAGAAGCCAGCCCTTCC...CAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp CTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCACTGGGTATGCAGATGTaGGTATCCCATGGGCAGATC +
Preference number: 5 (lower is better)
Translates to: LLASPGIFQLAVLVVDAALGMQM*VSHGQI
Trigger: GATCTGCCCATGGGATACCAACATCTGCATACCCAG...TGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACAAGGAACCACGCTCCCTaGTGTAGGCTGCCGTCATGC +
Preference number: 5 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTRNHAP*CRLPSC
Trigger: GCATGACGGCAGCCTACACAAGGGAGCGTGGTTCCT...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp TGGAGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCGTGCTGATACGGGCCTaGTCTAGGAGCTTCAGGATG +
Preference number: 5 (lower is better)
Translates to: WRSTHPSLSFVPEVRSPGVLIRA*SRSFRM
Trigger: CATCCTGAAGCTCCTAGACAAGGCCCGTATCAGCAC...GCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp AAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTATTAAAAGGCAGCACCTaGGTGAAGGCAGTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: KPWHLPIGCPSSGRGISLLKGST*VKAVES
Trigger: GCTCTCCACTGCCTTCACCAAGGTGCTGCCTTTTAA...TAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp GGAAAAGGACCAGACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCATCTGGCCATCGCGGTaGTCTCCATCACGAACCTCA +
Preference number: 5 (lower is better)
Translates to: GKGPDCTVAMYTKACTTSIWPSR*SPSRTS
Trigger: TGAGGTTCGTGATGGAGACAACCGCGATGGCCAGAT...GGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTCTGGTCCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp TCACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATATTGCCACAGACACGCTaGATGATCTGGCCATCGCGG +
Preference number: 5 (lower is better)
Translates to: SHFRPTLLHAMTHVQTDILPQTR*MIWPSR
Trigger: CCGCGATGGCCAGATCATCAAGCGTGTCTGTGGCAA...TATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACATTGCCACAGACACGCTaGATGATCTGGCCATCGCGG +
Preference number: 5 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTLPQTR*MIWPSR
Trigger: CCGCGATGGCCAGATCATCAAGCGTGTCTGTGGCAA...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp GCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGGGAGCTGGCCGCTCGTaGCCACAGACACGCTTGATG +
Preference number: 5 (lower is better)
Translates to: ASRNDTRTDGYTETLLKEGAGRS*PQTRLM
Trigger: CATCAAGCGTGTCTGTGGCAACGAGCGGCCAGCTCC...CTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp GACTGTACTGTGGCCATGTACACAAAGGCATGCACCACATCCCAGCTCTGCTGCGTAATGGTGTCTCCCTaGACTGAACCTGCATCGGAA +
Preference number: 5 (lower is better)
Translates to: DCTVAMYTKACTTSQLCCVMVSP*TEPASE
Trigger: TTCCGATGCAGGTTCAGTCAAGGGAGACACCATTAC...GCAGCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACATGGCCACAGTACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp ATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTACCAGCAATGGCTGGGTATGCAGATGTaGGTATCCCATGGGCAGATC +
Preference number: 5 (lower is better)
Translates to: IFQLAVLVVDAASAYQQWLGMQM*VSHGQI
Trigger: GATCTGCCCATGGGATACCAACATCTGCATACCCAG...CCATTGCTGGTAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp TCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCTGGGTATGCAGATGTaGGTATCCCATGGGCAGATC +
Preference number: 5 (lower is better)
Translates to: SLSFVPEVRSPGTAKFTGLGMQM*VSHGQI
Trigger: GATCTGCCCATGGGATACCAACATCTGCATACCCAG...GCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAATTAAAAGGCAGCACCTaGGTGAAGGCAGTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQLKGST*VKAVES
Trigger: GCTCTCCACTGCCTTCACCAAGGTGCTGCCTTTTAA...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp ACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGACCTGGCATCTTCCAATaGGCTGTCCTAGTAGTGGAC +
Preference number: 5 (lower is better)
Translates to: TGSSLELESLKRGLMKPRPGIFQ*AVLVVD
Trigger: GTCCACTACTAGGACAGCCAATTGGAAGATGCCAGG...TCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS CCA 90 bp AACTGCACAATAATCCCAGGGCTTTTTCAGTGCCACCAGGGAGGCTaGTTGCATGTGAATCCACAGGGAGAAACAGCAGAGGAGACTGTC +
Preference number: 5 (lower is better)
Translates to: NCTIIPGLFQCHQGG*LHVNPQGETAEETV
Trigger: GACAGTCTCCTCTGCTGTTTCTCCCTGTGGATTCACATGCAACCAGCCTCCCTGGTGGCACTGAAAAAGCCCTGGGATTATTGTGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS-3UTR CAA 90 bp GAGAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGAACCCAGCTCCATCCTaGCCGCGGCTGGTGCCCGAG +
Preference number: 5 (lower is better)
Translates to: ERFCIWSSLKKLTSCKPWNPAPS*PRLVPE
Trigger: CTCGGGCACCAGCCGCGGCAAGGATGGAGCTGGGTT...CCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp GGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGACAAAATCTGACCCTTaGGGGCTCGCAGAACCTGGC +
Preference number: 5 (lower is better)
Translates to: GEDHQVSGVERFCIWSSLTKSDP*GLAEPG
Trigger: GCCAGGTTCTGCGAGCCCCAAAGGGTCAGATTTTGT...CAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp AAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCTAAAACCGTCAAAATTCTaGGAGCCATCGGAGTGGAAG +
Preference number: 5 (lower is better)
Translates to: KPWHLPIGCPSSGRGISLKPSKF*EPSEWK
Trigger: CTTCCACTCCGATGGCTCCAAGAATTTTGACGGTTT...TAGGCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGTTAGCATGGCGTCCGTaGATAAGCCCAGGGCCCCCT +
Preference number: 5 (lower is better)
Translates to: RNDTRTDGYTETLLKECMLAWRP*ISPGPP
Trigger: AGGGGGCCCTGGGCTTATCAACGGACGCCATGCTAA...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp CTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAGTAATGGTGTCTCCCTaGACTGAACCTGCATCGGAA +
Preference number: 5 (lower is better)
Translates to: LSFVPEVRSPGTAKFTGQVMVSP*TEPASE
Trigger: TTCCGATGCAGGTTCAGTCAAGGGAGACACCATTAC...TTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp TCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGATCTTCCCTGCTCTGCAGTTTCTGCTaGCTGAAGGCCGCTGAGTAT +
Preference number: 5 (lower is better)
Translates to: SLELESLKRGLMKPRSSLLCSFC*LKAAEY
Trigger: ATACTCAGCGGCCTTCAGCAAGCAGAAACTGCAGAG...CAGGGAAGATCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp GCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGGGAAGGGCTGGCTTCTaGGTAGGGGCACTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: ASRNDTRTDGYTETLLKEGRAGF*VGALCS
Trigger: ACTGCAGAGTGCCCCTACCAAGAAGCCAGCCCTTCC...CTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp TCACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATAGTGCTGATACGGGCCTaGTCTAGGAGCTTCAGGATG +
Preference number: 5 (lower is better)
Translates to: SHFRPTLLHAMTHVQTDIVLIRA*SRSFRM
Trigger: CATCCTGAAGCTCCTAGACAAGGCCCGTATCAGCAC...TATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 90 bp ATCAGCTGTGCAAAACACCAAGTTCAAGTCAGCCAAGGCCAGAGATaGAGAAGGGCAGGATTGTGGAAAAGACAAAGGGCCCTTCCACTG +
Preference number: 5 (lower is better)
Translates to: ISCAKHQVQVSQGQR*RRAGLWKRQRALPL
Trigger: CAGTGGAAGGGCCCTTTGTCTTTTCCACAATCCTGCCCTTCTCCATCTCTGGCCTTGGCTGACTTGAACTTGGTGTTTTGCACAGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS-3UTR CAA 90 bp CACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCAAACCGTCAAAATTCTaGGAGCCATCGGAGTGGAAG +
Preference number: 5 (lower is better)
Translates to: HPSLSFVPEVRSPGTAKFKPSKF*EPSEWK
Trigger: CTTCCACTCCGATGGCTCCAAGAATTTTGACGGTTT...GAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACACTGGGTATGCAGATGTaGGTATCCCATGGGCAGATC +
Preference number: 5 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTLGMQM*VSHGQI
Trigger: GATCTGCCCATGGGATACCAACATCTGCATACCCAG...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp AAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTCGGCCAGCGCAACCCTaGGGTCTTTGGAGCAGTGAT +
Preference number: 5 (lower is better)
Translates to: KKLTSCKPWHLPIGCPSSRPAQP*GLWSSD
Trigger: ATCACTGCTCCAAAGACCCAAGGGTTGCGCTGGCCG...ACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACATTAAAAGGCAGCACCTaGGTGAAGGCAGTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTLKGST*VKAVES
Trigger: GCTCTCCACTGCCTTCACCAAGGTGCTGCCTTTTAA...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp CTGAAAGTTGGGGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGCCTGGCATCTTCCAATaGGCTGTCCTAGTAGTGGAC +
Preference number: 5 (lower is better)
Translates to: LKVGEDHQVSGVERFCIWPGIFQ*AVLVVD
Trigger: GTCCACTACTAGGACAGCCAATTGGAAGATGCCAGG...CCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCCCCAACTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp TGTCCCACAGGCAGCTCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCATTTCGGCAGCTCTaGCAGTTTTCAAAGATGGTA +
Preference number: 5 (lower is better)
Translates to: CPTGSSLELESLKRGLMKPFRQL*QFSKMV
Trigger: TACCATCTTTGAAAACTGCAAGAGCTGCCGAAATGG...CTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGAGCTGCCTGTGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp CACACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCATCTGGCCATCGCGGTaGTCTCCATCACGAACCTCA +
Preference number: 5 (lower is better)
Translates to: HTASRNDTRTDGYTETLLIWPSR*SPSRTS
Trigger: TGAGGTTCGTGATGGAGACAACCGCGATGGCCAGAT...GAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp TCTCTAGAACTTGAGAGCCTCAAAAGGGGCCTCATGAAGCCCAGATCTTCCCTGAAACCGTCAAAATTCTaGGAGCCATCGGAGTGGAAG +
Preference number: 5 (lower is better)
Translates to: SLELESLKRGLMKPRSSLKPSKF*EPSEWK
Trigger: CTTCCACTCCGATGGCTCCAAGAATTTTGACGGTTT...CAGGGAAGATCTGGGCTTCATGAGGCCCCTTTTGAGGCTCTCAAGTTCTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACAAAACCGTCAAAATTCTaGGAGCCATCGGAGTGGAAG +
Preference number: 5 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITKPSKF*EPSEWK
Trigger: CTTCCACTCCGATGGCTCCAAGAATTTTGACGGTTT...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGATTTTCTGGTACCCATaGACTGGGCCCCCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: RNDTRTDGYTETLLKECMIFWYP*TGPPGS
Trigger: AGACCCTGGGGGCCCAGTCAATGGGTACCAGAAAAT...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp AGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACACCAGGTCTGAAATCTTaGGTTCTCGGCAGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: RSTHPSLSFVPEVRSPGTPGLKS*VLGRLL
Trigger: TAAAAGCCTGCCGAGAACCAAAGATTTCAGACCTGG...TGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp GAAGCCCAGATCTTCCCTGGTCAAGCTGATGGCATTCGTATAACTGAAAGTTGGCCTGGCATCTTCCAATaGGCTGTCCTAGTAGTGGAC +
Preference number: 5 (lower is better)
Translates to: EAQIFPGQADGIRITESWPGIFQ*AVLVVD
Trigger: GTCCACTACTAGGACAGCCAATTGGAAGATGCCAGG...CCAACTTTCAGTTATACGAATGCCATCAGCTTGACCAGGGAAGATCTGGGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCTGGAGTGGAGAGGTTTaGTATATGGTCTTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISWSGEV*YMVFFE
Trigger: TTCAAAGAAGACCATATACAAAACCTCTCCACTCCA...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp TGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTGGACGCGGCATCAGCCGTTCATCATTCTTGTaGAACTGCACAATAATCCCA +
Preference number: 5 (lower is better)
Translates to: CKPWHLPIGCPSSGRGISRSSFL*NCTIIP
Trigger: TGGGATTATTGTGCAGTTCAACAAGAATGATGAACG...GCTGATGCCGCGTCCACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS CCA 90 bp GTAGGCTGTTTCCAGAGTCAGAGAGCATTAACCATCATGCTGGTCTaGCTCTCAGGTATGTCGTTCATCATTCTCTTGGCAAGGACGAGA +
Preference number: 5 (lower is better)
Translates to: VGCFQSQRALTIMLV*LSGMSFIILLARTR
Trigger: TCTCGTCCTTGCCAAGAGAATGATGAACGACATACCTGAGAGCCAGACCAGCATGATGGTTAATGCTCTCTGACTCTGGAAACAGCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527605.5
CDS-3UTR CAA 90 bp TTTGTCCCTGAAGTCAGAAGCCCTGGCACAGCCAAGTTCACAGGCCAAATCACACCATTTCGGCAGCTCTaGCAGTTTTCAAAGATGGTA +
Preference number: 5 (lower is better)
Translates to: FVPEVRSPGTAKFTGQITPFRQL*QFSKMV
Trigger: TACCATCTTTGAAAACTGCAAGAGCTGCCGAAATGG...TGTGATTTGGCCTGTGAACTTGGCTGTGCCAGGGCTTCTGACTTCAGGGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp TATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATGGAGCTGGCCGCTCGTaGCCACAGACACGCTTGATG +
Preference number: 5 (lower is better)
Translates to: YMVFFEETYFLQALASSNGAGRS*PQTRLM
Trigger: CATCAAGCGTGTCTGTGGCAACGAGCGGCCAGCTCC...ATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611014.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp AAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTATTTTCTGGTACCCATaGACTGGGCCCCCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: KKLTSCKPWHLPIGCPSSIFWYP*TGPPGS
Trigger: AGACCCTGGGGGCCCAGTCAATGGGTACCAGAAAAT...ACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp TGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCATTTTCTGGTACCCATaGACTGGGCCCCCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: WSSLKKLTSCKPWHLPIGIFWYP*TGPPGS
Trigger: AGACCCTGGGGGCCCAGTCAATGGGTACCAGAAAAT...GCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp GGAAGACCACCAGGTCAGTGGAGTGGAGAGGTTTTGTATATGGTCTTCTTTGAACTCTGCAGTTTCTGCTaGCTGAAGGCCGCTGAGTAT +
Preference number: 5 (lower is better)
Translates to: GRPPGQWSGEVLYMVFFELCSFC*LKAAEY
Trigger: ATACTCAGCGGCCTTCAGCAAGCAGAAACTGCAGAG...TTCAAAGAAGACCATATACAAAACCTCTCCACTCCACTGACCTGGTGGTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp GAGAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGGGAAGGGCTGGCTTCTaGGTAGGGGCACTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: ERFCIWSSLKKLTSCKPWGRAGF*VGALCS
Trigger: ACTGCAGAGTGCCCCTACCAAGAAGCCAGCCCTTCC...CCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp CACACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCCTGGGTATGCAGATGTaGGTATCCCATGGGCAGATC +
Preference number: 5 (lower is better)
Translates to: HTASRNDTRTDGYTETLLLGMQM*VSHGQI
Trigger: GATCTGCCCATGGGATACCAACATCTGCATACCCAG...GAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp GAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCAAGGAACCACGCTCCCTaGTGTAGGCTGCCGTCATGC +
Preference number: 5 (lower is better)
Translates to: EVLYMVFFEETYFLQALARNHAP*CRLPSC
Trigger: GCATGACGGCAGCCTACACAAGGGAGCGTGGTTCCT...TGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp CTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGTGCTGATACGGGCCTaGTCTAGGAGCTTCAGGATG +
Preference number: 5 (lower is better)
Translates to: LHAMTHVQTDIQKHFSRSVLIRA*SRSFRM
Trigger: CATCCTGAAGCTCCTAGACAAGGCCCGTATCAGCAC...ACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp GCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGCCTGGCATCTTCCAATaGGCTGTCCTAGTAGTGGAC +
Preference number: 5 (lower is better)
Translates to: ASRNDTRTDGYTETLLKEPGIFQ*AVLVVD
Trigger: GTCCACTACTAGGACAGCCAATTGGAAGATGCCAGG...CTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS TCA 90 bp AGCAGTTTCTTTCTTCAAGGACAGACAATGAATCTTCTGACGCCTTaGTCTTGGACTTCCCAGCCTCCAGAAGATTTTCACAGCGCTGCC +
Preference number: 5 (lower is better)
Translates to: SSFFLQGQTMNLLTP*SWTSQPPEDFHSAA
Trigger: GGCAGCGCTGTGAAAATCTTCTGGAGGCTGGGAAGTCCAAGATCAAGGCGTCAGAAGATTCATTGTCTGTCCTTGAAGAAAGAAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527605.5
ENST00000622144.4
CDS TCA 90 bp AATCTTTGGTTCTCGGCAGGCTTTTATGCAGATGGGCTGTTTCCCTaGCCACTCTCCATTCTGCTGGCAAGTTCTTTTCTCATTGCCACT +
Preference number: 5 (lower is better)
Translates to: NLWFSAGFYADGLFP*PLSILLASSFLIAT
Trigger: AGTGGCAATGAGAAAAGAACTTGCCAGCAGAATGGAGAGTGGTCAGGGAAACAGCCCATCTGCATAAAAGCCTGCCGAGAACCAAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527605.5
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp CACACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCGTAATGGTGTCTCCCTaGACTGAACCTGCATCGGAA +
Preference number: 5 (lower is better)
Translates to: HTASRNDTRTDGYTETLLVMVSP*TEPASE
Trigger: TTCCGATGCAGGTTCAGTCAAGGGAGACACCATTAC...GAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp TATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATCGGCCAGCGCAACCCTaGGGTCTTTGGAGCAGTGAT +
Preference number: 5 (lower is better)
Translates to: YMVFFEETYFLQALASSNRPAQP*GLWSSD
Trigger: ATCACTGCTCCAAAGACCCAAGGGTTGCGCTGGCCG...ATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp TATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATAGGAACCACGCTCCCTaGTGTAGGCTGCCGTCATGC +
Preference number: 5 (lower is better)
Translates to: YMVFFEETYFLQALASSNRNHAP*CRLPSC
Trigger: GCATGACGGCAGCCTACACAAGGGAGCGTGGTTCCT...ATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp AAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTTTAAAAGGCAGCACCTaGGTGAAGGCAGTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: KKLTSCKPWHLPIGCPSSLKGST*VKAVES
Trigger: GCTCTCCACTGCCTTCACCAAGGTGCTGCCTTTTAA...ACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp AAGAAACTTACTTCTTGCAAGCCCTGGCATCTTCCAATTGGCTGTCCTAGTAGTCCTGGCATCTTCCAATaGGCTGTCCTAGTAGTGGAC +
Preference number: 5 (lower is better)
Translates to: KKLTSCKPWHLPIGCPSSPGIFQ*AVLVVD
Trigger: GTCCACTACTAGGACAGCCAATTGGAAGATGCCAGG...ACTACTAGGACAGCCAATTGGAAGATGCCAGGGCTTGCAAGAAGTAAGTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 90 bp AGGCATCCCAGACTTCTGGTAATTAAGTTTGGTTTCCATCAGCTGTaGAAAACACCAAGTTCAAGTCAGCCAAGGCCAGAGATGGAGAAG +
Preference number: 5 (lower is better)
Translates to: RHPRLLVIKFGFHQL*KTPSSSQPRPEMEK
Trigger: CTTCTCCATCTCTGGCCTTGGCTGACTTGAACTTGGTGTTTTGCACAGCTGATGGAAACCAAACTTAATTACCAGAAGTCTGGGATGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS-3UTR CAA 90 bp TTTGTAGTTCAGAAGCCAACCCTTATTTTATTAAAATGTGTACAAGAGATGGGGGGAGCTGGCCGCTCGTaGCCACAGACACGCTTGATG +
Preference number: 5 (lower is better)
Translates to: FVVQKPTLILLKCVQEMGGAGRS*PQTRLM
Trigger: CATCAAGCGTGTCTGTGGCAACGAGCGGCCAGCTCC...CCCCATCTCTTGTACACATTTTAATAAAATAAGGGTTGGCTTCTGAACTACAAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp CGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGCATGCCAGGTCTGAAATCTTaGGTTCTCGGCAGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: RNDTRTDGYTETLLKECMPGLKS*VLGRLL
Trigger: TAAAAGCCTGCCGAGAACCAAAGATTTCAGACCTGG...CATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp ACTGCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGTAATGGTGTCTCCCTaGACTGAACCTGCATCGGAA +
Preference number: 5 (lower is better)
Translates to: TASRNDTRTDGYTETLLKVMVSP*TEPASE
Trigger: TTCCGATGCAGGTTCAGTCAAGGGAGACACCATTAC...CTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS-3UTR CAA 90 bp AGGTCTACTCACCCTTCACTGAGTTTTGTCCCTGAAGTCAGAAGCCCTGGCACATGGAGTGGAGAGGTTTaGTATATGGTCTTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: RSTHPSLSFVPEVRSPGTWSGEV*YMVFFE
Trigger: TTCAAAGAAGACCATATACAAAACCTCTCCACTCCA...TGTGCCAGGGCTTCTGACTTCAGGGACAAAACTCAGTGAAGGGTGAGTAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS GCA 90 bp AATCTGATCATATTCACAGCACTCCCGACACATGATATTCCACTCTaGTCCAGGGCAGGCTTCATTAATGACTGTGTACTCTCTTGGCAA +
Preference number: 5 (lower is better)
Translates to: NLIIFTALPTHDIPL*SRAGFINDCVLSWQ
Trigger: TTGCCAAGAGAGTACACAGTCATTAATGAAGCCTGCCCTGGAGCAGAGTGGAATATCATGTGTCGGGAGTGCTGTGAATATGATCAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000529303.1
ENST00000534803.1
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS CCA 90 bp GTAGGCTGTTTCCAGAGTCAGAGAGCATTAACCATCATGCTGGTCTaGCTCTCAGGTATGTCGTTCATCATTCTTGTTGAACTGCACAAT +
Preference number: 5 (lower is better)
Translates to: VGCFQSQRALTIMLV*LSGMSFIILVELHN
Trigger: ATTGTGCAGTTCAACAAGAATGATGAACGACATACCTGAGAGCCAGACCAGCATGATGGTTAATGCTCTCTGACTCTGGAAACAGCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS-3UTR CAA 90 bp GAGGTTTTGTATATGGTCTTCTTTGAAGAAACTTACTTCTTGCAAGCCCTGGCATTAAAAGGCAGCACCTaGGTGAAGGCAGTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: EVLYMVFFEETYFLQALALKGST*VKAVES
Trigger: GCTCTCCACTGCCTTCACCAAGGTGCTGCCTTTTAA...TGCCAGGGCTTGCAAGAAGTAAGTTTCTTCAAAGAAGACCATATACAAAACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp ACACTTCAGGCCCACACTGCTTCACGCAATGACACACGTACAGACGGATATACATGGAGTGGAGAGGTTTaGTATATGGTCTTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: TLQAHTASRNDTRTDGYTWSGEV*YMVFFE
Trigger: TTCAAAGAAGACCATATACAAAACCTCTCCACTCCA...TGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGCAGTGTGGGCCTGAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS GCA 90 bp AATCTGATCATATTCACAGCACTCCCGACACATGATATTCCACTCTaGTCCAGGGCAGGCTTCATTAATGACTGTGTACTAAGTAGTAAG +
Preference number: 5 (lower is better)
Translates to: NLIIFTALPTHDIPL*SRAGFINDCVLSSK
Trigger: CTTACTACTTAGTACACAGTCATTAATGAAGCCTGCCCTGGAGCAGAGTGGAATATCATGTGTCGGGAGTGCTGTGAATATGATCAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527605.5
ENST00000621476.4
CDS-3UTR CAA 90 bp CTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTTGGAGTGGAGAGGTTTaGTATATGGTCTTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: LHAMTHVQTDIQKHFSRSWSGEV*YMVFFE
Trigger: TTCAAAGAAGACCATATACAAAACCTCTCCACTCCA...ACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS-3UTR CAA 90 bp GCTTCACGCAATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTGTCGTTCATCATTCTaGTTGAACTGCACAATAATC +
Preference number: 5 (lower is better)
Translates to: ASRNDTRTDGYTETLLKECRSSF*LNCTII
Trigger: GATTATTGTGCAGTTCAACAAGAATGATGAACGACA...CTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATTGCGTGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS GCA 90 bp AATGACACACGTACAGACGGATATACAGAAACACTTCTCAAGGAGTaGATGAGCATGGTTCATTTCATATTTCTTTCAATCCAGTCTTTA +
Preference number: 5 (lower is better)
Translates to: NDTRTDGYTETLLKE*MSMVHFIFLSIQSL
Trigger: TAAAGACTGGATTGAAAGAAATATGAAATGAACCATGCTCATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACGTGTGTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 72 bp TCTGCTGCCTTAACCCTTGCGGGGCCCCGGGAGGTGTaGCCACGCCTGGAGACCCGCGGACGGCGGCTGCAA +
Preference number: 6 (lower is better)
Translates to: SAALTLAGPREV*PRLETRGRRLQ
Trigger: TTGCAGCCGCCGTCCGCGGGTCTCCAGGCGTGGCCACACCTCCCGGGGCCCCGCAAGGGTTAAGGCAGCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS GCA 72 bp CGTCCAGCAACCCAGCTCCATCCTTGCCGCGGCTGGTaGCCGAGCGTCTACTGGGGAGGGAGAGGAGGGACC +
Preference number: 6 (lower is better)
Translates to: RPATQLHPCRGW*PSVYWGGRGGT
Trigger: GGTCCCTCCTCTCCCTCCCCAGTAGACGCTCGGGCACCAGCCGCGGCAAGGATGGAGCTGGGTTGCTGGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527605.5
ENST00000615849.4
CDS GCA 72 bp GAGCCCCAACTGCGTCCAGCAACCCAGCTCCATCCTTaGCGCGGCTGGTGCCCGAGCGTCTACTGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: EPQLRPATQLHP*RGWCPSVYWGG
Trigger: CCCTCCCCAGTAGACGCTCGGGCACCAGCCGCGGCAAGGATGGAGCTGGGTTGCTGGACGCAGTTGGGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527605.5
ENST00000615849.4
CDS CCA 72 bp CTGCGTCCAGCAACCCAGCTCCATCCTTGCCGCGGCTaGTGCCCGAGCGTCTACTGGGGAGGGAGAGGAGGG +
Preference number: 6 (lower is better)
Translates to: LRPATQLHPCRG*CPSVYWGGRGG
Trigger: CCCTCCTCTCCCTCCCCAGTAGACGCTCGGGCACCAGCCGCGGCAAGGATGGAGCTGGGTTGCTGGACGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527605.5
ENST00000615849.4
CDS GCA 72 bp GCCAGAGCGACGTCAGCCCAAACCTCTCCTCTCTGCTaGCTTAACCCTTGCGGGGCCCCGGGAGGTGTGGCC +
Preference number: 6 (lower is better)
Translates to: ARATSAQTSPLC*LNPCGAPGGVA
Trigger: GGCCACACCTCCCGGGGCCCCGCAAGGGTTAAGGCAGCAGAGAGGAGAGGTTTGGGCTGACGTCGCTCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS CCA 72 bp GGCTGCCGTCATGCACCCCGCTGGTCCTCCTGTAGATaGCTGCCTGCCACGGCCAGCGCAACCCTTGGGTCT +
Preference number: 6 (lower is better)
Translates to: GCRHAPRWSSCR*LPATASATLGS
Trigger: AGACCCAAGGGTTGCGCTGGCCGTGGCAGGCAGCCATCTACAGGAGGACCAGCGGGGTGCATGACGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 72 bp TCAGCCCAAACCTCTCCTCTCTGCTGCCTTAACCCTTaGGGGGCCCCGGGAGGTGTGGCCACGCCTGGAGAC +
Preference number: 6 (lower is better)
Translates to: SAQTSPLCCLNP*GAPGGVATPGD
Trigger: GTCTCCAGGCGTGGCCACACCTCCCGGGGCCCCGCAAGGGTTAAGGCAGCAGAGAGGAGAGGTTTGGGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS CCA 72 bp ACGCTCCCTTGTGTAGGCTGCCGTCATGCACCCCGCTaGTCCTCCTGTAGATGGCTGCCTGCCACGGCCAGC +
Preference number: 6 (lower is better)
Translates to: TLPCVGCRHAPR*SSCRWLPATAS
Trigger: GCTGGCCGTGGCAGGCAGCCATCTACAGGAGGACCAGCGGGGTGCATGACGGCAGCCTACACAAGGGAGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 72 bp GACCAGTCCCATCAGATGCCAGCGTGGCTCAGGAGATaGTCGTCCCGGGAAGGACACAGCCGCGATGCCTCC +
Preference number: 6 (lower is better)
Translates to: DQSHQMPAWLRR*SSREGHSRDAS
Trigger: GGAGGCATCGCGGCTGTGTCCTTCCCGGGACGAGCATCTCCTGAGCCACGCTGGCATCTGATGGGACTGGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 72 bp TCAGCCAGAGCGACGTCAGCCCAAACCTCTCCTCTCTaGTGCCTTAACCCTTGCGGGGCCCCGGGAGGTGTG +
Preference number: 6 (lower is better)
Translates to: SARATSAQTSPL*CLNPCGAPGGV
Trigger: CACACCTCCCGGGGCCCCGCAAGGGTTAAGGCAGCAGAGAGGAGAGGTTTGGGCTGACGTCGCTCTGGCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS CCA 72 bp GTGCTGAGATCCCGACTGGCAGCGAGGCAGATGGGCTaGACTCGGGTGCTGATACGGGCCTTGTCTAGGAGC +
Preference number: 6 (lower is better)
Translates to: VLRSRLAARQMG*TRVLIRALSRS
Trigger: GCTCCTAGACAAGGCCCGTATCAGCACCCGAGTCCAGCCCATCTGCCTCGCTGCCAGTCGGGATCTCAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CAA 90 bp AGCGAGTCCACCACACTGACCACCCCAGAGCGCAGTGTGTCGTTCTaGAAGCCAGGGCTCCTCACGTCTGCCAGGACATTCCAGCCAGCC +
Preference number: 6 (lower is better)
Translates to: SESTTLTTPERSVSF*KPGLLTSARTFQPA
Trigger: GGCTGGCTGGAATGTCCTGGCAGACGTGAGGAGCCCTGGCTTCAAGAACGACACACTGCGCTCTGGGGTGGTCAGTGTGGTGGACTCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS TCA 72 bp GACTGGCAGCGAGGCAGATGGGCTGGACTCGGGTGCTaGTACGGGCCTTGTCTAGGAGCTTCAGGATGGCGA +
Preference number: 6 (lower is better)
Translates to: DWQRGRWAGLGC*YGPCLGASGWR
Trigger: TCGCCATCCTGAAGCTCCTAGACAAGGCCCGTATCAGCACCCGAGTCCAGCCCATCTGCCTCGCTGCCAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS TCA 72 bp TCGGGTTTCAGCTCGCCAGGCTCTCCCATCCTCATCTaGGGGGAACCACCTTCAGCCAGAGCGACGTCAGCC +
Preference number: 6 (lower is better)
Translates to: SGFSSPGSPILI*GEPPSARATSA
Trigger: GGCTGACGTCGCTCTGGCTGAAGGTGGTTCCCCTCAGATGAGGATGGGAGAGCCTGGCGAGCTGAAACCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615849.4
CDS GCA 72 bp CCACCACCACAGTGCGCTCATTCACCAGGGCACCGCTaGAGACTAGGAACCACGCTCCCTTGTGTAGGCTGC +
Preference number: 6 (lower is better)
Translates to: PPPQCAHSPGHR*RLGTTLPCVGC
Trigger: GCAGCCTACACAAGGGAGCGTGGTTCCTAGTCTGCAGCGGTGCCCTGGTGAATGAGCGCACTGTGGTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 72 bp GGAAGGACACAGCCGCGATGCCTCCTGTCTCTGCAGTaGAGATATCAGAAGGGGCAGTGGGTTCCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: GRTQPRCLLSLQ*RYQKGQWVPSW
Trigger: CCAGCTGGGAACCCACTGCCCCTTCTGATATCTGCACTGCAGAGACAGGAGGCATCGCGGCTGTGTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CAA 90 bp CTGGCAGCGAGGCAGATGGGCTGGACTCGGGTGCTGATACGGGCCTaGTCTAGGAGCTTCAGGATGGCGATGTCAGCATCAAGCAGGATG +
Preference number: 6 (lower is better)
Translates to: LAARQMGWTRVLIRA*SRSFRMAMSASSRM
Trigger: CATCCTGCTTGATGCTGACATCGCCATCCTGAAGCTCCTAGACAAGGCCCGTATCAGCACCCGAGTCCAGCCCATCTGCCTCGCTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 72 bp AGGACATTCCAGCCAGCCACAGTGATGTGGGACTCCTaGAAGGAAGTGCTGAGATCCCGACTGGCAGCGAGG +
Preference number: 6 (lower is better)
Translates to: RTFQPATVMWDS*KEVLRSRLAAR
Trigger: CCTCGCTGCCAGTCGGGATCTCAGCACTTCCTTCCAGGAGTCCCACATCACTGTGGCTGGCTGGAATGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CAA 72 bp GAGGATCCTATGCTCTGGATAGGAGCTGGCCGCTCGTaGCCACAGACACGCTTGATGATCTGGCCATCGCGG +
Preference number: 6 (lower is better)
Translates to: EDPMLWIGAGRS*PQTRLMIWPSR
Trigger: CCGCGATGGCCAGATCATCAAGCGTGTCTGTGGCAACGAGCGGCCAGCTCCTATCCAGAGCATAGGATCCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000534803.1
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CAA 72 bp ACCACACTGACCACCCCAGAGCGCAGTGTGTCGTTCTaGAAGCCAGGGCTCCTCACGTCTGCCAGGACATTC +
Preference number: 6 (lower is better)
Translates to: TTLTTPERSVSF*KPGLLTSARTF
Trigger: GAATGTCCTGGCAGACGTGAGGAGCCCTGGCTTCAAGAACGACACACTGCGCTCTGGGGTGGTCAGTGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CAA 90 bp ACGTGGAGTGAGGATCCTATGCTCTGGATAGGAGCTGGCCGCTCGTaGCCACAGACACGCTTGATGATCTGGCCATCGCGGTTGTCTCCA +
Preference number: 6 (lower is better)
Translates to: TWSEDPMLWIGAGRS*PQTRLMIWPSRLSP
Trigger: TGGAGACAACCGCGATGGCCAGATCATCAAGCGTGTCTGTGGCAACGAGCGGCCAGCTCCTATCCAGAGCATAGGATCCTCACTCCACGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000534803.1
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CAA 90 bp GCTGGTCCTCCTGTAGATGGCTGCCTGCCACGGCCAGCGCAACCCTaGGGTCTTTGGAGCAGTGATGTTCTCAATTTTCCCGCAGATAGG +
Preference number: 6 (lower is better)
Translates to: AGPPVDGCLPRPAQP*GLWSSDVLNFPADR
Trigger: CCTATCTGCGGGAAAATTGAGAACATCACTGCTCCAAAGACCCAAGGGTTGCGCTGGCCGTGGCAGGCAGCCATCTACAGGAGGACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 72 bp CTGGCCACATCGCATGCAGTCTCCTCCGTACCAGCCTaGTCGGCACTCTGCACAGTAGAACCCCTTCACATA +
Preference number: 6 (lower is better)
Translates to: LATSHAVSSVPA*SALCTVEPLHI
Trigger: TATGTGAAGGGGTTCTACTGTGCAGAGTGCCGAGCAGGCTGGTACGGAGGAGACTGCATGCGATGTGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000534803.1
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 72 bp CAGTGTGTCGTTCTTGAAGCCAGGGCTCCTCACGTCTaGCAGGACATTCCAGCCAGCCACAGTGATGTGGGA +
Preference number: 6 (lower is better)
Translates to: QCVVLEARAPHV*QDIPASHSDVG
Trigger: TCCCACATCACTGTGGCTGGCTGGAATGTCCTGGCAGACGTGAGGAGCCCTGGCTTCAAGAACGACACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 72 bp GCTGGCCGCTCGTTGCCACAGACACGCTTGATGATCTaGCCATCGCGGTTGTCTCCATCACGAACCTCAACA +
Preference number: 6 (lower is better)
Translates to: AGRSLPQTRLMI*PSRLSPSRTST
Trigger: TGTTGAGGTTCGTGATGGAGACAACCGCGATGGCCAGATCATCAAGCGTGTCTGTGGCAACGAGCGGCCAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000534803.1
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 72 bp ACGTCTGCCAGGACATTCCAGCCAGCCACAGTGATGTaGGACTCCTGGAAGGAAGTGCTGAGATCCCGACTG +
Preference number: 6 (lower is better)
Translates to: TSARTFQPATVM*DSWKEVLRSRL
Trigger: CAGTCGGGATCTCAGCACTTCCTTCCAGGAGTCCCACATCACTGTGGCTGGCTGGAATGTCCTGGCAGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CAA 72 bp TGGATAGGAGCTGGCCGCTCGTTGCCACAGACACGCTaGATGATCTGGCCATCGCGGTTGTCTCCATCACGA +
Preference number: 6 (lower is better)
Translates to: WIGAGRSLPQTR*MIWPSRLSPSR
Trigger: TCGTGATGGAGACAACCGCGATGGCCAGATCATCAAGCGTGTCTGTGGCAACGAGCGGCCAGCTCCTATCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000534803.1
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CAA 72 bp AGGCAGATGGGCTGGACTCGGGTGCTGATACGGGCCTaGTCTAGGAGCTTCAGGATGGCGATGTCAGCATCA +
Preference number: 6 (lower is better)
Translates to: RQMGWTRVLIRA*SRSFRMAMSAS
Trigger: TGATGCTGACATCGCCATCCTGAAGCTCCTAGACAAGGCCCGTATCAGCACCCGAGTCCAGCCCATCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CAA 90 bp CCTATGCTCTGGATAGGAGCTGGCCGCTCGTTGCCACAGACACGCTaGATGATCTGGCCATCGCGGTTGTCTCCATCACGAACCTCAACA +
Preference number: 6 (lower is better)
Translates to: PMLWIGAGRSLPQTR*MIWPSRLSPSRTST
Trigger: TGTTGAGGTTCGTGATGGAGACAACCGCGATGGCCAGATCATCAAGCGTGTCTGTGGCAACGAGCGGCCAGCTCCTATCCAGAGCATAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000534803.1
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CAA 90 bp TGTTGGTATCCCATGGGCAGATCTCCAAAGGGAAGGGCTGGCTTCTaGGTAGGGGCACTCTGCAGTTTCTGCTTGCTGAAGGCCGCTGAG +
Preference number: 6 (lower is better)
Translates to: CWYPMGRSPKGRAGF*VGALCSFCLLKAAE
Trigger: CTCAGCGGCCTTCAGCAAGCAGAAACTGCAGAGTGCCCCTACCAAGAAGCCAGCCCTTCCCTTTGGAGATCTGCCCATGGGATACCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 72 bp CCAAAGGGAAGGGCTGGCTTCTTGGTAGGGGCACTCTaGAGTTTCTGCTTGCTGAAGGCCGCTGAGTATAGC +
Preference number: 6 (lower is better)
Translates to: PKGRAGFLVGAL*SFCLLKAAEYS
Trigger: GCTATACTCAGCGGCCTTCAGCAAGCAGAAACTGCAGAGTGCCCCTACCAAGAAGCCAGCCCTTCCCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CAA 72 bp CCCATGGGCAGATCTCCAAAGGGAAGGGCTGGCTTCTaGGTAGGGGCACTCTGCAGTTTCTGCTTGCTGAAG +
Preference number: 6 (lower is better)
Translates to: PMGRSPKGRAGF*VGALCSFCLLK
Trigger: CTTCAGCAAGCAGAAACTGCAGAGTGCCCCTACCAAGAAGCCAGCCCTTCCCTTTGGAGATCTGCCCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CAA 72 bp CCTGTAGATGGCTGCCTGCCACGGCCAGCGCAACCCTaGGGTCTTTGGAGCAGTGATGTTCTCAATTTTCCC +
Preference number: 6 (lower is better)
Translates to: PVDGCLPRPAQP*GLWSSDVLNFP
Trigger: GGGAAAATTGAGAACATCACTGCTCCAAAGACCCAAGGGTTGCGCTGGCCGTGGCAGGCAGCCATCTACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CAA 90 bp AAGGGAAGGGCTGGCTTCTTGGTAGGGGCACTCTGCAGTTTCTGCTaGCTGAAGGCCGCTGAGTATAGCTGGTGTAATGGTGTCTCCCTG +
Preference number: 6 (lower is better)
Translates to: KGRAGFLVGALCSFC*LKAAEYSWCNGVSL
Trigger: CAGGGAGACACCATTACACCAGCTATACTCAGCGGCCTTCAGCAAGCAGAAACTGCAGAGTGCCCCTACCAAGAAGCCAGCCCTTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531219.1
CDS TCA 72 bp AGAGCCTGTGGCTGCATGTTTTATCATAGCTCCAGCTaGCCAGTCCCATCAGATGCCAGCGTGGCTCAGGAG +
Preference number: 6 (lower is better)
Translates to: RACGCMFYHSSS*PVPSDASVAQE
Trigger: CTCCTGAGCCACGCTGGCATCTGATGGGACTGGTCAGCTGGAGCTATGATAAAACATGCAGCCACAGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 72 bp GTTCTCAATTTTCCCGCAGATAGGGATGCAGGATGGTaGCCGCCCACTCCACTTCCCAGTCCTCAGACATGT +
Preference number: 6 (lower is better)
Translates to: VLNFPADRDAGW*PPTPLPSPQTC
Trigger: ACATGTCTGAGGACTGGGAAGTGGAGTGGGCGGGCACCATCCTGCATCCCTATCTGCGGGAAAATTGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 72 bp TTATCAGTGACACTCACTGGGATGCCATGGTCCTCATaGTGCTCCTCACACAGCAGCGAGTCCACCACACTG +
Preference number: 6 (lower is better)
Translates to: LSVTLTGMPWSS*CSSHSSESTTL
Trigger: CAGTGTGGTGGACTCGCTGCTGTGTGAGGAGCAGCATGAGGACCATGGCATCCCAGTGAGTGTCACTGATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 72 bp ATTGTGGAAAAGACAAAGGGCCCTTCCACTGGAGCCTaGTGTAACTGGCCCCTTCATGGAAGTCTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: IVEKTKGPSTGA*CNWPLHGSLQP
Trigger: GGGCTGGAGACTTCCATGAAGGGGCCAGTTACAGCAGGCTCCAGTGGAAGGGCCCTTTGTCTTTTCCACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS CCA 72 bp GATGTTCTCAATTTTCCCGCAGATAGGGATGCAGGATaGTGCCCGCCCACTCCACTTCCCAGTCCTCAGACA +
Preference number: 6 (lower is better)
Translates to: DVLNFPADRDAG*CPPTPLPSPQT
Trigger: TGTCTGAGGACTGGGAAGTGGAGTGGGCGGGCACCATCCTGCATCCCTATCTGCGGGAAAATTGAGAACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CAA 72 bp ATCCCAGGGCTTTTTCAGTGCCACCAGGGAGGCTGGTaGCATGTGAATCCACAGGGAGAAACAGCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: IPGLFQCHQGGW*HVNPQGETAEE
Trigger: CTCCTCTGCTGTTTCTCCCTGTGGATTCACATGCAACCAGCCTCCCTGGTGGCACTGAAAAAGCCCTGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS CAA 90 bp AAGGGAAGGGCTGGCTTCTTGGTAGGGGCACTCTGCAGTTTCTGCTaGCTGAAGGCCGCTGAGTATAGCTGGTGTAATGGTGTCTCCCTT +
Preference number: 6 (lower is better)
Translates to: KGRAGFLVGALCSFC*LKAAEYSWCNGVSL
Trigger: AAGGGAGACACCATTACACCAGCTATACTCAGCGGCCTTCAGCAAGCAGAAACTGCAGAGTGCCCCTACCAAGAAGCCAGCCCTTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS GCA 72 bp CATGCAGTCTCCTCCGTACCAGCCTGCTCGGCACTCTaGACAGTAGAACCCCTTCACATAGAAGTCATCCAA +
Preference number: 6 (lower is better)
Translates to: HAVSSVPACSAL*TVEPLHIEVIQ
Trigger: TTGGATGACTTCTATGTGAAGGGGTTCTACTGTGCAGAGTGCCGAGCAGGCTGGTACGGAGGAGACTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000527605.5
ENST00000529303.1
ENST00000534803.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 72 bp TTGGTATCCCATGGGCAGATCTCCAAAGGGAAGGGCTaGCTTCTTGGTAGGGGCACTCTGCAGTTTCTGCTT +
Preference number: 6 (lower is better)
Translates to: LVSHGQISKGKG*LLGRGTLQFLL
Trigger: AAGCAGAAACTGCAGAGTGCCCCTACCAAGAAGCCAGCCCTTCCCTTTGGAGATCTGCCCATGGGATACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 72 bp CAGAACATGTTATCAGTGACACTCACTGGGATGCCATaGTCCTCATGCTGCTCCTCACACAGCAGCGAGTCC +
Preference number: 6 (lower is better)
Translates to: QNMLSVTLTGMP*SSCCSSHSSES
Trigger: GGACTCGCTGCTGTGTGAGGAGCAGCATGAGGACCATGGCATCCCAGTGAGTGTCACTGATAACATGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CAA 72 bp GCTGGCTTCTTGGTAGGGGCACTCTGCAGTTTCTGCTaGCTGAAGGCCGCTGAGTATAGCTGGTGTAATGGT +
Preference number: 6 (lower is better)
Translates to: AGFLVGALCSFC*LKAAEYSWCNG
Trigger: ACCATTACACCAGCTATACTCAGCGGCCTTCAGCAAGCAGAAACTGCAGAGTGCCCCTACCAAGAAGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CAA 90 bp CACCAAGTTCAAGTCAGCCAAGGCCAGAGATGGAGAAGGGCAGGATaGTGGAAAAGACAAAGGGCCCTTCCACTGGAGCCTGCTGTAACT +
Preference number: 6 (lower is better)
Translates to: HQVQVSQGQRWRRAG*WKRQRALPLEPAVT
Trigger: AGTTACAGCAGGCTCCAGTGGAAGGGCCCTTTGTCTTTTCCACAATCCTGCCCTTCTCCATCTCTGGCCTTGGCTGACTTGAACTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS CCA 72 bp AGTCACACTCATTCTCCTCATTCCTGCAGCAAGGGATaGTATAACCCACGACTTCCCTCTTTCCGGGGCAGA +
Preference number: 6 (lower is better)
Translates to: SHTHSPHSCSKG*YNPRLPSFRGR
Trigger: TCTGCCCCGGAAAGAGGGAAGTCGTGGGTTATACCATCCCTTGCTGCAGGAATGAGGAGAATGAGTGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000527605.5
ENST00000529303.1
ENST00000534803.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 72 bp GCATGGAAACCGTCAAAATTCTTGGAGCCATCGGAGTaGAAGAGGACGTGGAGTGAGGATCCTATGCTCTGG +
Preference number: 6 (lower is better)
Translates to: AWKPSKFLEPSE*KRTWSEDPMLW
Trigger: CCAGAGCATAGGATCCTCACTCCACGTCCTCTTCCACTCCGATGGCTCCAAGAATTTTGACGGTTTCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000534803.1
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 72 bp GAGATGCACTCATACTGGAGCTGGGTATGCAGATGTTaGTATCCCATGGGCAGATCTCCAAAGGGAAGGGCT +
Preference number: 6 (lower is better)
Translates to: EMHSYWSWVCRC*YPMGRSPKGRA
Trigger: AGCCCTTCCCTTTGGAGATCTGCCCATGGGATACCAACATCTGCATACCCAGCTCCAGTATGAGTGCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000527605.5
ENST00000531219.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 72 bp ATAATCCCAGGGCTTTTTCAGTGCCACCAGGGAGGCTaGTTGCATGTGAATCCACAGGGAGAAACAGCAGAG +
Preference number: 6 (lower is better)
Translates to: IIPGLFQCHQGG*LHVNPQGETAE
Trigger: CTCTGCTGTTTCTCCCTGTGGATTCACATGCAACCAGCCTCCCTGGTGGCACTGAAAAAGCCCTGGGATTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS CAA 90 bp GCCTTGATCTTGGACTTCCCAGCCTCCAGAACTCATTCCAAGGTGTaGATCACACTTCTGGGTGCCAACCACGGTGTCTGTACATTCGTA +
Preference number: 6 (lower is better)
Translates to: ALILDFPASRTHSKV*ITLLGANHGVCTFV
Trigger: TACGAATGTACAGACACCGTGGTTGGCACCCAGAAGTGTGATCAACACCTTGGAATGAGTTCTGGAGGCTGGGAAGTCCAAGATCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534803.1
CDS CAA 90 bp TGCACAATAATCCCAGGGCTTTTTCAGTGCCACCAGGGAGGCTGGTaGCATGTGAATCCACAGGGAGAAACAGCAGAGGAGACTGTCTTT +
Preference number: 6 (lower is better)
Translates to: CTIIPGLFQCHQGGW*HVNPQGETAEETVF
Trigger: AAAGACAGTCTCCTCTGCTGTTTCTCCCTGTGGATTCACATGCAACCAGCCTCCCTGGTGGCACTGAAAAAGCCCTGGGATTATTGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS CCA 72 bp GCAAAACACCAAGTTCAAGTCAGCCAAGGCCAGAGATaGAGAAGGGCAGGATTGTGGAAAAGACAAAGGGCC +
Preference number: 6 (lower is better)
Translates to: AKHQVQVSQGQR*RRAGLWKRQRA
Trigger: GGCCCTTTGTCTTTTCCACAATCCTGCCCTTCTCCATCTCTGGCCTTGGCTGACTTGAACTTGGTGTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS TCA 72 bp ACGACTTCCCTCTTTCCGGGGCAGACGCACTCAATCTaGTCATATTCACAGCACTCCCGACACATGATATTC +
Preference number: 6 (lower is better)
Translates to: TTSLFPGQTHSI*SYSQHSRHMIF
Trigger: GAATATCATGTGTCGGGAGTGCTGTGAATATGATCAGATTGAGTGCGTCTGCCCCGGAAAGAGGGAAGTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000527605.5
ENST00000529303.1
ENST00000534803.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CCA 72 bp TCTCCTCATAAATGGCATGGAAACCGTCAAAATTCTTaGAGCCATCGGAGTGGAAGAGGACGTGGAGTGAGG +
Preference number: 6 (lower is better)
Translates to: SPHKWHGNRQNS*SHRSGRGRGVR
Trigger: CCTCACTCCACGTCCTCTTCCACTCCGATGGCTCCAAGAATTTTGACGGTTTCCATGCCATTTATGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000534803.1
ENST00000611014.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CAA 72 bp TCGGAAGAACTCTCCTTCTCACCAGGTCTGAAATCTTaGGTTCTCGGCAGGCTTTTATGCAGATGGGCTGTT +
Preference number: 6 (lower is better)
Translates to: SEELSFSPGLKS*VLGRLLCRWAV
Trigger: AACAGCCCATCTGCATAAAAGCCTGCCGAGAACCAAAGATTTCAGACCTGGTGAGAAGGAGAGTTCTTCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527605.5
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4
CDS CAA 90 bp GAGCAGTTTCTTTCTTCAAGGACAGACAATGAATCTTCTGACGCCTaGATCTTGGACTTCCCAGCCTCCAGAAGATTTTCACAGCGCTGC +
Preference number: 6 (lower is better)
Translates to: EQFLSSRTDNESSDA*ILDFPASRRFSQRC
Trigger: GCAGCGCTGTGAAAATCTTCTGGAGGCTGGGAAGTCCAAGATCAAGGCGTCAGAAGATTCATTGTCTGTCCTTGAAGAAAGAAACTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527605.5
ENST00000622144.4
CDS CAA 90 bp TTTCTTTCTTCAAGGACAGACAATGAATCTTCTGACGCCTTGATCTaGGACTTCCCAGCCTCCAGAAGATTTTCACAGCGCTGCCCAGTA +
Preference number: 6 (lower is better)
Translates to: FLSSRTDNESSDALI*DFPASRRFSQRCPV
Trigger: TACTGGGCAGCGCTGTGAAAATCTTCTGGAGGCTGGGAAGTCCAAGATCAAGGCGTCAGAAGATTCATTGTCTGTCCTTGAAGAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527605.5
ENST00000622144.4
CDS GCA 72 bp ATATTCACAGCACTCCCGACACATGATATTCCACTCTaGTCCAGGGCAGGCTTCATTAATGACTGTGTACTC +
Preference number: 6 (lower is better)
Translates to: IFTALPTHDIPL*SRAGFINDCVL
Trigger: GAGTACACAGTCATTAATGAAGCCTGCCCTGGAGCAGAGTGGAATATCATGTGTCGGGAGTGCTGTGAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000529303.1
ENST00000534803.1
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000622144.4
CDS CCA 72 bp TTCCAGAGTCAGAGAGCATTAACCATCATGCTGGTCTaGCTCTCAGGTATGTCGTTCATCATTCTCTTGGCA +
Preference number: 6 (lower is better)
Translates to: FQSQRALTIMLV*LSGMSFIILLA
Trigger: TGCCAAGAGAATGATGAACGACATACCTGAGAGCCAGACCAGCATGATGGTTAATGCTCTCTGACTCTGGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527605.5
CDS GCA 72 bp ATATTCACAGCACTCCCGACACATGATATTCCACTCTaGTCCAGGGCAGGCTTCATTAATGACTGTGTACTA +
Preference number: 6 (lower is better)
Translates to: IFTALPTHDIPL*SRAGFINDCVL
Trigger: TAGTACACAGTCATTAATGAAGCCTGCCCTGGAGCAGAGTGGAATATCATGTGTCGGGAGTGCTGTGAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527605.5
ENST00000621476.4
CDS GCA 72 bp AGACTTCTGGTAATTAAGTTTGGTTTCCATCAGCTGTaGAAAACACCAAGTTCAAGTCAGCCAAGGCCAGAG +
Preference number: 6 (lower is better)
Translates to: RLLVIKFGFHQL*KTPSSSQPRPE
Trigger: CTCTGGCCTTGGCTGACTTGAACTTGGTGTTTTGCACAGCTGATGGAAACCAAACTTAATTACCAGAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS CCA 72 bp TTCCAGAGTCAGAGAGCATTAACCATCATGCTGGTCTaGCTCTCAGGTATGTCGTTCATCATTCTTGTTGAA +
Preference number: 6 (lower is better)
Translates to: FQSQRALTIMLV*LSGMSFIILVE
Trigger: TTCAACAAGAATGATGAACGACATACCTGAGAGCCAGACCAGCATGATGGTTAATGCTCTCTGACTCTGGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621476.4
CDS GCA 72 bp CGTACAGACGGATATACAGAAACACTTCTCAAGGAGTaGATGAGCATGGTTCATTTCATATTTCTTTCAATC +
Preference number: 6 (lower is better)
Translates to: RTDGYTETLLKE*MSMVHFIFLSI
Trigger: GATTGAAAGAAATATGAAATGAACCATGCTCATGCACTCCTTGAGAAGTGTTTCTGTATATCCGTCTGTACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611014.4
ENST00000615849.4
ENST00000619888.5
ENST00000621476.4
ENST00000622144.4