RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PAM (Homo sapiens)

Ensembl gene IDs: ENSG00000145730

Ensembl transcript IDs: ENST00000304400.12, ENST00000345721.6, ENST00000346918.7, ENST00000348126.7, ENST00000379799.7, ENST00000438793.7, ENST00000438793.8, ENST00000455264.7, ENST00000504456.1, ENST00000504691.1, ENST00000505372.1, ENST00000505654.1, ENST00000506006.1, ENST00000506260.1, ENST00000508060.1, ENST00000509523.2, ENST00000509636.5, ENST00000509832.5, ENST00000510006.6, ENST00000510208.2, ENST00000511477.5, ENST00000511839.5, ENST00000512073.1, ENST00000513648.5, ENST00000682024.1, ENST00000682407.1, ENST00000682882.1, ENST00000682972.1, ENST00000684043.1, ENST00000684379.1, ENST00000684529.1

Found 360 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATAATTGGCCCAAAAGAGGCACAAGAGCCAAGCTGTGAGGAACAGTaGACTGGCCTGGCAGAGGACTGCTCCCTGAAGACTCTTCTCCCC +
Preference number: 1 (lower is better)
Translates to: IIGPKEAQEPSCEEQ*TGLAEDCSLKTLLP
Trigger: GGGGAGAAGAGTCTTCAGGGAGCAGTCCTCTGCCAGGCCAGTTCACTGTTCCTCACAGCTTGGCTCTTGTGCCTCTTTTGGGCCAATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CCA 90 bp CTGATACATAAATGGCTCCAGTGCCTGGATCCACAGCCACATCAGTaGGTTGACAGAAGTGATTCTGGTCACTGCCTGGTTGCATGCTCC +
Preference number: 1 (lower is better)
Translates to: LIHKWLQCLDPQPHQ*VDRSDSGHCLVACS
Trigger: GGAGCATGCAACCAGGCAGTGACCAGAATCACTTCTGTCAACCCACTGATGTGGCTGTGGATCCAGGCACTGGAGCCATTTATGTATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR GCA 90 bp GATCCACAGCCACATCAGTGGGTTGACAGAAGTGATTCTGGTCACTaGCTGGTTGCATGCTCCTTCCCAGGATTAATACAGGGCCTTCTT +
Preference number: 1 (lower is better)
Translates to: DPQPHQWVDRSDSGH*LVACSFPGLIQGLL
Trigger: AAGAAGGCCCTGTATTAATCCTGGGAAGGAGCATGCAACCAGGCAGTGACCAGAATCACTTCTGTCAACCCACTGATGTGGCTGTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR GCA 90 bp CAATCCTGCTGTTGCAGTAACCATCTGATACATAAATGGCTCCAGTaGCTGGATCCACAGCCACATCAGTGGGTTGACAGAAGTGATTCT +
Preference number: 1 (lower is better)
Translates to: QSCCCSNHLIHKWLQ*LDPQPHQWVDRSDS
Trigger: AGAATCACTTCTGTCAACCCACTGATGTGGCTGTGGATCCAGGCACTGGAGCCATTTATGTATCAGATGGTTACTGCAACAGCAGGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR GCA 90 bp ACAGGCACTCCCGAGCCTGGCTCTTTGATCAGTTTCTGTTTCTCTTaGATCTTCTGCAATTCTGAGGAGGTGGGTTTGTTCTCCATTTTG +
Preference number: 1 (lower is better)
Translates to: TGTPEPGSLISFCFS*IFCNSEEVGLFSIL
Trigger: CAAAATGGAGAACAAACCCACCTCCTCAGAATTGCAGAAGATGCAAGAGAAACAGAAACTGATCAAAGAGCCAGGCTCGGGAGTGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CCA 90 bp AAAACTGCACAATCCTGCTGTTGCAGTAACCATCTGATACATAAATaGCTCCAGTGCCTGGATCCACAGCCACATCAGTGGGTTGACAGA +
Preference number: 1 (lower is better)
Translates to: KTAQSCCCSNHLIHK*LQCLDPQPHQWVDR
Trigger: TCTGTCAACCCACTGATGTGGCTGTGGATCCAGGCACTGGAGCCATTTATGTATCAGATGGTTACTGCAACAGCAGGATTGTGCAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR GCA 90 bp CATCAGTGGGTTGACAGAAGTGATTCTGGTCACTGCCTGGTTGCATaGTCCTTCCCAGGATTAATACAGGGCCTTCTTTATTGTTTGGAT +
Preference number: 1 (lower is better)
Translates to: HQWVDRSDSGHCLVA*SFPGLIQGLLYCLD
Trigger: ATCCAAACAATAAAGAAGGCCCTGTATTAATCCTGGGAAGGAGCATGCAACCAGGCAGTGACCAGAATCACTTCTGTCAACCCACTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR GCA 90 bp GGTGTTGGTATGAGCATCTCCAATGTACACAGTCCCATCTTCAGATaGAACAATATCATGAGGCATATCAAAGTGCTTGCGCACTGGCTT +
Preference number: 1 (lower is better)
Translates to: GVGMSISNVHSPIFR*NNIMRHIKVLAHWL
Trigger: AAGCCAGTGCGCAAGCACTTTGATATGCCTCATGATATTGTTGCATCTGAAGATGGGACTGTGTACATTGGAGATGCTCATACCAACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CCA 90 bp GGGAATTGGAATGTTGGCCTCTGGTGGTATGGTTCTGAACATATCTaGAGCTACATTCTGGGTACAGGTCATGAAAGAAACTGCATGCTT +
Preference number: 1 (lower is better)
Translates to: GNWNVGLWWYGSEHI*SYILGTGHERNCML
Trigger: AAGCATGCAGTTTCTTTCATGACCTGTACCCAGAATGTAGCTCCAGATATGTTCAGAACCATACCACCAGAGGCCAACATTCCAATTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CCA 90 bp CATAACCATATCAGACTTCACGGGAATTGGAATGTTGGCCTCTGGTaGTATGGTTCTGAACATATCTGGAGCTACATTCTGGGTACAGGT +
Preference number: 1 (lower is better)
Translates to: HNHIRLHGNWNVGLW*YGSEHIWSYILGTG
Trigger: ACCTGTACCCAGAATGTAGCTCCAGATATGTTCAGAACCATACCACCAGAGGCCAACATTCCAATTCCCGTGAAGTCTGATATGGTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR TCA 90 bp CTGCTCTCTGGTGGCCTCAAGGTAGATACTAGTCTGTGGAATTTGTaGATTCTGTCTCTGACAAGAATAGCATTACCCCTCTCATGTTCT +
Preference number: 1 (lower is better)
Translates to: LLSGGLKVDTSLWNL*ILSLTRIALPLSCS
Trigger: AGAACATGAGAGGGGTAATGCTATTCTTGTCAGAGACAGAATTCACAAATTCCACAGACTAGTATCTACCTTGAGGCCACCAGAGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CCA 90 bp CATCATAACCATATCAGACTTCACGGGAATTGGAATGTTGGCCTCTaGTGGTATGGTTCTGAACATATCTGGAGCTACATTCTGGGTACA +
Preference number: 1 (lower is better)
Translates to: HHNHIRLHGNWNVGL*WYGSEHIWSYILGT
Trigger: TGTACCCAGAATGTAGCTCCAGATATGTTCAGAACCATACCACCAGAGGCCAACATTCCAATTCCCGTGAAGTCTGATATGGTTATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CCA 90 bp AATAACCAGAAGGGTTGTAATGAGAACAACAGGCACTCCCGAGCCTaGCTCTTTGATCAGTTTCTGTTTCTCTTGCATCTTCTGCAATTC +
Preference number: 1 (lower is better)
Translates to: NNQKGCNENNRHSRA*LFDQFLFLLHLLQF
Trigger: GAATTGCAGAAGATGCAAGAGAAACAGAAACTGATCAAAGAGCCAGGCTCGGGAGTGCCTGTTGTTCTCATTACAACCCTTCTGGTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR TCA 90 bp TGTTCCAATTTCTCAGTCAAGGTGAACTTCCACACGGTGTTGGTATaGGCATCTCCAATGTACACAGTCCCATCTTCAGATGCAACAATA +
Preference number: 1 (lower is better)
Translates to: CSNFSVKVNFHTVLV*ASPMYTVPSSDATI
Trigger: TATTGTTGCATCTGAAGATGGGACTGTGTACATTGGAGATGCTCATACCAACACCGTGTGGAAGTTCACCTTGACTGAGAAATTGGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CCA 90 bp TGTCATTCATTACTTTCCAGGCTACCATCTTTAATTAACCCAGGTTaGCAGAATAAAGGTGGAGTGCTAGGACAGGATTGTAATGCCCTA +
Preference number: 1 (lower is better)
Translates to: CHSLLSRLPSLINPG*QNKGGVLGQDCNAL
Trigger: TAGGGCATTACAATCCTGTCCTAGCACTCCACCTTTATTCTGCCAACCTGGGTTAATTAAAGATGGTAGCCTGGAAAGTAATGAATGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438793.7
3UTR TCA 90 bp TCTGACTCTGATTCTGCCTTTTCTGTAGGATTATATTTGTGCACATaGACAACATCTTCCCTTTCTCCTAGCAGCTTGGAAAGTAGTGAA +
Preference number: 1 (lower is better)
Translates to: SDSDSAFSVGLYLCT*TTSSLSPSSLESSE
Trigger: TTCACTACTTTCCAAGCTGCTAGGAGAAAGGGAAGATGTTGTTCATGTGCACAAATATAATCCTACAGAAAAGGCAGAATCAGAGTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CCA 90 bp TATATTTGTGCACATGAACAACATCTTCCCTTTCTCCTAGCAGCTTaGAAAGTAGTGAATAGAAATCACCCTGGTCTAACACTTCTTCTT +
Preference number: 1 (lower is better)
Translates to: YICAHEQHLPFLLAA*KVVNRNHPGLTLLL
Trigger: AAGAAGAAGTGTTAGACCAGGGTGATTTCTATTCACTACTTTCCAAGCTGCTAGGAGAAAGGGAAGATGTTGTTCATGTGCACAAATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CCA 90 bp TGCAGCATTATTTGGATCTATGACAAGAATAGTGTCTTCTTCAATTaGTCCGAGTCCTATTTGCTGGTAAACAAACTTGCTGTCAAACGA +
Preference number: 1 (lower is better)
Translates to: CSIIWIYDKNSVFFN*SESYLLVNKLAVKR
Trigger: TCGTTTGACAGCAAGTTTGTTTACCAGCAAATAGGACTCGGACCAATTGAAGAAGACACTATTCTTGTCATAGATCCAAATAATGCTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR TCA 90 bp TCGATAAATGAAGTTCAGCCAAGAATAATCAGTGGAAAGATTGCCTaGAGTCAATGTCATTCATTACTTTCCAGGCTACCATCTTTAATT +
Preference number: 1 (lower is better)
Translates to: SINEVQPRIISGKIA*SQCHSLLSRLPSLI
Trigger: AATTAAAGATGGTAGCCTGGAAAGTAATGAATGACATTGACTTCAGGCAATCTTTCCACTGATTATTCTTGGCTGAACTTCATTTATCGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438793.7
3UTR-3UTR CCA 90 bp TCCGACCATTTTCCCGGTCTGCCACACATAATTGGCCCAAAAGAGGCACAAGAGAGGGTAGAAAGCCTGTaGCAGCTGAGGGCTCTGCCG +
Preference number: 2 (lower is better)
Translates to: SDHFPGLPHIIGPKEAQERVESL*QLRALP
Trigger: CGGCAGAGCCCTCAGCTGCCACAGGCTTTCTACCCT...CTCTTGTGCCTCTTTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CAA 90 bp TACATAAATGGCTCCAGTGCCTGGATCCACAGCCACATCAGTGGGTaGACAGAAGTGATTCTGGTCACTGCCTGGTTGCATGCTCCTTCC +
Preference number: 2 (lower is better)
Translates to: YINGSSAWIHSHISG*TEVILVTAWLHAPS
Trigger: GGAAGGAGCATGCAACCAGGCAGTGACCAGAATCACTTCTGTCAACCCACTGATGTGGCTGTGGATCCAGGCACTGGAGCCATTTATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR TCA 90 bp CCACAGCCACATCAGTGGGTTGACAGAAGTGATTCTGGTCACTGCCTGGTTGCATGTTTGGATCCAGTTTaGACACCTGATGGAGAGCCA +
Preference number: 2 (lower is better)
Translates to: PQPHQWVDRSDSGHCLVACLDPV*TPDGEP
Trigger: TGGCTCTCCATCAGGTGTTCAAACTGGATCCAAACA...TGCAACCAGGCAGTGACCAGAATCACTTCTGTCAACCCACTGATGTGGCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR GCA 90 bp TTAAAACACTGGATCCGACCATTTTCCCGGTCTGCCACACATAATTGGCCCAAAGGCCTGGCAGAGGACTaGTCCCTGAAGACTCTTCTC +
Preference number: 2 (lower is better)
Translates to: LKHWIRPFSRSATHNWPKGLAED*SLKTLL
Trigger: GAGAAGAGTCTTCAGGGAGCAGTCCTCTGCCAGGCC...TTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGATCCAGTGTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR CCA 90 bp TCCGACCATTTTCCCGGTCTGCCACACATAATTGGCCCAAAAGAGGCACAAGAGCGGGAATTGGAATGTTaGCCTCTGGTGGTATGGTTC +
Preference number: 2 (lower is better)
Translates to: SDHFPGLPHIIGPKEAQERELEC*PLVVWF
Trigger: GAACCATACCACCAGAGGCCAACATTCCAATTCCCG...CTCTTGTGCCTCTTTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR GCA 90 bp ATAACCAGAAGGGTTGTAATGAGAACAACAGGCACTCCCGAGCCTGGCTCTTTGCATAAATGGCTCCAGTaGCTGGATCCACAGCCACAT +
Preference number: 2 (lower is better)
Translates to: ITRRVVMRTTGTPEPGSLHKWLQ*LDPQPH
Trigger: ATGTGGCTGTGGATCCAGGCACTGGAGCCATTTATG...CAAAGAGCCAGGCTCGGGAGTGCCTGTTGTTCTCATTACAACCCTTCTGGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR TCA 90 bp GGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCTTCTTCAAAGCCTGTGGCAGCTaGGGGCTCTGCCGTCCAATC +
Preference number: 2 (lower is better)
Translates to: GLEYCSIIWIYDKNSVFFKACGS*GLCRPI
Trigger: GATTGGACGGCAGAGCCCTCAGCTGCCACAGGCTTT...GAAGAAGACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR GCA 90 bp TTTCCACCGAATAAATATGGCAATGGCCAGCAGGACAACCACCGGAATAACCAGTCCAGGCCAATCCAGTaGCTCTTCCATGTGGAAATC +
Preference number: 2 (lower is better)
Translates to: FPPNKYGNGQQDNHRNNQSRPIQ*LFHVEI
Trigger: GATTTCCACATGGAAGAGGCACTGGATTGGCCTGGA...CTGGTTATTCCGGTGGTTGTCCTGCTGGCCATTGCCATATTTATTCGGTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR GCA 90 bp AACAGGCACTCCCGAGCCTGGCTCTTTGATCAGTTTCTGTTTCTCTTGCATCTTAGGCTTCCCATTCACTaGAAAGAGCAAGCCTGGTAT +
Preference number: 2 (lower is better)
Translates to: NRHSRAWLFDQFLFLLHLRLPIH*KEQAWY
Trigger: ATACCAGGCTTGCTCTTTGCAGTGAATGGGAAGCCT...AAGATGCAAGAGAAACAGAAACTGATCAAAGAGCCAGGCTCGGGAGTGCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR CCA 90 bp ATAACCAGAAGGGTTGTAATGAGAACAACAGGCACTCCCGAGCCTGGCTCTTTGCATCTGATACATAAATaGCTCCAGTGCCTGGATCCA +
Preference number: 2 (lower is better)
Translates to: ITRRVVMRTTGTPEPGSLHLIHK*LQCLDP
Trigger: TGGATCCAGGCACTGGAGCCATTTATGTATCAGATG...CAAAGAGCCAGGCTCGGGAGTGCCTGTTGTTCTCATTACAACCCTTCTGGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CAA 90 bp AGAAGGGTTGTAATGAGAACAACAGGCACTCCCGAGCCTGGCTCTTaGATCAGTTTCTGTTTCTCTTGCATCTTCTGCAATTCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: RRVVMRTTGTPEPGS*ISFCFSCIFCNSEE
Trigger: CTCCTCAGAATTGCAGAAGATGCAAGAGAAACAGAAACTGATCAAAGAGCCAGGCTCGGGAGTGCCTGTTGTTCTCATTACAACCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR TCA 90 bp TTTCCACCGAATAAATATGGCAATGGCCAGCAGGACAACCACCGGAATAACCAGGAACTTTCCACTTGGTaGAAACTGCACAATCCTGCT +
Preference number: 2 (lower is better)
Translates to: FPPNKYGNGQQDNHRNNQELSTW*KLHNPA
Trigger: AGCAGGATTGTGCAGTTTTCACCAAGTGGAAAGTTC...CTGGTTATTCCGGTGGTTGTCCTGCTGGCCATTGCCATATTTATTCGGTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR CCA 90 bp ATAACCAGAAGGGTTGTAATGAGAACAACAGGCACTCCCGAGCCTGGCTCTTTGAATGTTGGCCTCTGGTaGTATGGTTCTGAACATATC +
Preference number: 2 (lower is better)
Translates to: ITRRVVMRTTGTPEPGSLNVGLW*YGSEHI
Trigger: GATATGTTCAGAACCATACCACCAGAGGCCAACATT...CAAAGAGCCAGGCTCGGGAGTGCCTGTTGTTCTCATTACAACCCTTCTGGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CAA 90 bp TCTTGCATCTTCTGCAATTCTGAGGAGGTGGGTTTGTTCTCCATTTaGGTTTCAACAACTGCCTCGGCTTTGATTTCCTGGACCTCAATG +
Preference number: 2 (lower is better)
Translates to: SCIFCNSEEVGLFSI*VSTTASALISWTSM
Trigger: CATTGAGGTCCAGGAAATCAAAGCCGAGGCAGTTGTTGAAACCAAAATGGAGAACAAACCCACCTCCTCAGAATTGCAGAAGATGCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR TCA 90 bp AATAAAGGTGGAGTGCTAGGACAGGATTGTAATGCCCTAGCAGACTTACCGTTTAGCTCACTGCAGCCTTaGATTTCTGGGCTCAAACAA +
Preference number: 2 (lower is better)
Translates to: NKGGVLGQDCNALADLPFSSLQP*ISGLKQ
Trigger: TTGTTTGAGCCCAGAAATTCAAGGCTGCAGTGAGCT...AAACGGTAAGTCTGCTAGGGCATTACAATCCTGTCCTAGCACTCCACCTTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438793.7
3UTR-3UTR GCA 90 bp ACCCTTTTCGACTGTAGCCCTTACGGCTTGCAAAGAAATTACCAAGGTTTAAGCGTAATGAGAAAACTCTaGTCTCTGGTGGCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: TLFDCSPYGLQRNYQGLSVMRKL*SLVASR
Trigger: CCTTGAGGCCACCAGAGAGCAGAGTTTTCTCATTAC...GCTTAAACCTTGGTAATTTCTTTGCAAGCCGTAAGGGCTACAGTCGAAAAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR CCA 90 bp AACAGGCACTCCCGAGCCTGGCTCTTTGATCAGTTTCTGTTTCTCTTGCATCTTTCTGGAGCTACATTCTaGGTACAGGTCATGAAAGAA +
Preference number: 2 (lower is better)
Translates to: NRHSRAWLFDQFLFLLHLSGATF*VQVMKE
Trigger: TTCTTTCATGACCTGTACCCAGAATGTAGCTCCAGA...AAGATGCAAGAGAAACAGAAACTGATCAAAGAGCCAGGCTCGGGAGTGCCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR CCA 90 bp GGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCTTCTTCATCTCCTGTGTGTTCTaGTTCCCAGGTGCCTTCACC +
Preference number: 2 (lower is better)
Translates to: GLEYCSIIWIYDKNSVFFISCVF*FPGAFT
Trigger: GGTGAAGGCACCTGGGAACCAGAACACACAGGAGAT...GAAGAAGACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR GCA 90 bp ACATTTGCAATCTCAGCTACCAGGTCTGACTCTGATTCTGCCTTTTCTGTAGGACACCACTTTTTCTCCTaGTGGGATAACAGTGTCAAC +
Preference number: 2 (lower is better)
Translates to: TFAISATRSDSDSAFSVGHHFFS*WDNSVN
Trigger: GTTGACACTGTTATCCCAGCAGGAGAAAAAGTGGTG...TCCTACAGAAAAGGCAGAATCAGAGTCAGACCTGGTAGCTGAGATTGCAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR GCA 90 bp GGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCTTCTTCTCACCAGGTGGGGGCTaGTGTAATGAGAAAACTCTG +
Preference number: 2 (lower is better)
Translates to: GLEYCSIIWIYDKNSVFFSPGGG*CNEKTL
Trigger: CAGAGTTTTCTCATTACAGCAGCCCCCACCTGGTGA...GAAGAAGACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR GCA 90 bp AATAAAGGTGGAGTGCTAGGACAGGATTGTAATGCCCTAGCAGACTTACCGTTTTTGATCATAGCTCACTaGAGCCTTGAATTTCTGGGC +
Preference number: 2 (lower is better)
Translates to: NKGGVLGQDCNALADLPFLIIAH*SLEFLG
Trigger: GCCCAGAAATTCAAGGCTGCAGTGAGCTATGATCAA...AAACGGTAAGTCTGCTAGGGCATTACAATCCTGTCCTAGCACTCCACCTTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438793.7
3UTR-3UTR CCA 90 bp TTAAAACACTGGATCCGACCATTTTCCCGGTCTGCCACACATAATTGGCCCAAAGGTTCTGAACATATCTaGAGCTACATTCTGGGTACA +
Preference number: 2 (lower is better)
Translates to: LKHWIRPFSRSATHNWPKGSEHI*SYILGT
Trigger: TGTACCCAGAATGTAGCTCCAGATATGTTCAGAACC...TTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGATCCAGTGTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR CCA 90 bp ACATTTGCAATCTCAGCTACCAGGTCTGACTCTGATTCTGCCTTTTCTGTAGGATGGAATGTTGGCCTCTaGTGGTATGGTTCTGAACAT +
Preference number: 2 (lower is better)
Translates to: TFAISATRSDSDSAFSVGWNVGL*WYGSEH
Trigger: ATGTTCAGAACCATACCACCAGAGGCCAACATTCCA...TCCTACAGAAAAGGCAGAATCAGAGTCAGACCTGGTAGCTGAGATTGCAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR CCA 90 bp TCCGAGTCCTATTTGCTGGTAAACAAACTTGCTGTCAAACGAGTTTCCATCCCAAGTGCCTCTTCCATGTaGAAATCTCCTGTGTGTTCT +
Preference number: 2 (lower is better)
Translates to: SESYLLVNKLAVKRVSIPSASSM*KSPVCS
Trigger: AGAACACACAGGAGATTTCCACATGGAAGAGGCACT...TGGGATGGAAACTCGTTTGACAGCAAGTTTGTTTACCAGCAAATAGGACTCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR CCA 90 bp GGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCTTCTTCGCCACCCCAGAAACCTaGCCTGGTAACAAGTATACT +
Preference number: 2 (lower is better)
Translates to: GLEYCSIIWIYDKNSVFFATPET*PGNKYT
Trigger: AGTATACTTGTTACCAGGCCAGGTTTCTGGGGTGGC...GAAGAAGACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR CCA 90 bp TTTCCACCGAATAAATATGGCAATGGCCAGCAGGACAACCACCGGAATAACCAGGCCTTCTTTATTGTTTaGATCCAGTTTGAACACCTG +
Preference number: 2 (lower is better)
Translates to: FPPNKYGNGQQDNHRNNQAFFIV*IQFEHL
Trigger: CAGGTGTTCAAACTGGATCCAAACAATAAAGAAGGC...CTGGTTATTCCGGTGGTTGTCCTGCTGGCCATTGCCATATTTATTCGGTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR CCA 90 bp AATAAAGGTGGAGTGCTAGGACAGGATTGTAATGCCCTAGCAGACTTACCGTTTGCAGCCTTGAATTTCTaGGCTCAAACAATCCTTCTG +
Preference number: 2 (lower is better)
Translates to: NKGGVLGQDCNALADLPFAALNF*AQTILL
Trigger: CAGAAGGATTGTTTGAGCCCAGAAATTCAAGGCTGC...AAACGGTAAGTCTGCTAGGGCATTACAATCCTGTCCTAGCACTCCACCTTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438793.7
3UTR CAA 90 bp AGTTTCTGTTTCTCTTGCATCTTCTGCAATTCTGAGGAGGTGGGTTaGTTCTCCATTTTGGTTTCAACAACTGCCTCGGCTTTGATTTCC +
Preference number: 2 (lower is better)
Translates to: SFCFSCIFCNSEEVG*FSILVSTTASALIS
Trigger: GGAAATCAAAGCCGAGGCAGTTGTTGAAACCAAAATGGAGAACAAACCCACCTCCTCAGAATTGCAGAAGATGCAAGAGAAACAGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR CCA 90 bp TCCGAGTCCTATTTGCTGGTAAACAAACTTGCTGTCAAACGAGTTTCCATCCCAACATGGTCACCTCTGTaGAAAATCACCAGGTTATTC +
Preference number: 2 (lower is better)
Translates to: SESYLLVNKLAVKRVSIPTWSPL*KITRLF
Trigger: GAATAACCTGGTGATTTTCCACAGAGGTGACCATGT...TGGGATGGAAACTCGTTTGACAGCAAGTTTGTTTACCAGCAAATAGGACTCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CAA 90 bp ATCTATGACAAGAATAGTGTCTTCTTCAATTGGTCCGAGTCCTATTaGCTGGTAAACAAACTTGCTGTCAAACGAGTTTCCATCCCAGAC +
Preference number: 2 (lower is better)
Translates to: IYDKNSVFFNWSESY*LVNKLAVKRVSIPD
Trigger: GTCTGGGATGGAAACTCGTTTGACAGCAAGTTTGTTTACCAGCAAATAGGACTCGGACCAATTGAAGAAGACACTATTCTTGTCATAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR GCA 90 bp ACCCTTTTCGACTGTAGCCCTTACGGCTTGCAAAGAAATTACCAAGGTTTAAGCTCTTCTCGTTTTGGCTaGTGTAGTAAAGGAATCTTA +
Preference number: 2 (lower is better)
Translates to: TLFDCSPYGLQRNYQGLSSSRFG*CSKGIL
Trigger: TAAGATTCCTTTACTACAGCAGCCAAAACGAGAAGA...GCTTAAACCTTGGTAATTTCTTTGCAAGCCGTAAGGGCTACAGTCGAAAAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR GCA 72 bp TGTTCTGGTTCCCAGGTGCCTTCACCAGGTGGGGGCTaGTGTAATGAGAAAACTCTGCTCTCTGGTGGCCTC +
Preference number: 3 (lower is better)
Translates to: CSGSQVPSPGGG*CNEKTLLSGGL
Trigger: GAGGCCACCAGAGAGCAGAGTTTTCTCATTACAGCAGCCCCCACCTGGTGAAGGCACCTGGGAACCAGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CCA 72 bp AAATGGCTCCAGTGCCTGGATCCACAGCCACATCAGTaGGTTGACAGAAGTGATTCTGGTCACTGCCTGGTT +
Preference number: 3 (lower is better)
Translates to: KWLQCLDPQPHQ*VDRSDSGHCLV
Trigger: AACCAGGCAGTGACCAGAATCACTTCTGTCAACCCACTGATGTGGCTGTGGATCCAGGCACTGGAGCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR CAA 90 bp TTAAAACACTGGATCCGACCATTTTCCCGGTCTGCCACACATAATTGGCCCAAACTGGTCACTGCCTGGTaGCATGCTCCTTCCCAGGAT +
Preference number: 3 (lower is better)
Translates to: LKHWIRPFSRSATHNWPKLVTAW*HAPSQD
Trigger: ATCCTGGGAAGGAGCATGCAACCAGGCAGTGACCAG...TTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGATCCAGTGTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR GCA 72 bp CAAACAATCCTTCTGCTTGGCCTCCCACAATCCTTCTaGTTGGCCTCCCAAAGTCCTGGAAGTATAGGCTTG +
Preference number: 3 (lower is better)
Translates to: QTILLLGLPQSF*LASQSPGSIGL
Trigger: CAAGCCTATACTTCCAGGACTTTGGGAGGCCAAGCAGAAGGATTGTGGGAGGCCAAGCAGAAGGATTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438793.7
3UTR GCA 72 bp CCACATCAGTGGGTTGACAGAAGTGATTCTGGTCACTaGCTGGTTGCATGCTCCTTCCCAGGATTAATACAG +
Preference number: 3 (lower is better)
Translates to: PHQWVDRSDSGH*LVACSFPGLIQ
Trigger: CTGTATTAATCCTGGGAAGGAGCATGCAACCAGGCAGTGACCAGAATCACTTCTGTCAACCCACTGATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR TCA 72 bp CACCAATGTGTGTGGCTTCTGTCCTTCCTTCACCAGTaGATACACATCTTGCAGCCAGTAGGTCACCAAAAC +
Preference number: 3 (lower is better)
Translates to: HQCVWLLSFLHQ*IHILQPVGHQN
Trigger: GTTTTGGTGACCTACTGGCTGCAAGATGTGTATTCACTGGTGAAGGAAGGACAGAAGCCACACACATTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR TCA 72 bp CGGGAATTGGAATGTTGGCCTCTGGTGGTATGGTTCTaGACATATCTGGAGCTACATTCTGGGTACAGGTCA +
Preference number: 3 (lower is better)
Translates to: RELECWPLVVWF*TYLELHSGYRS
Trigger: TGACCTGTACCCAGAATGTAGCTCCAGATATGTTCAGAACCATACCACCAGAGGCCAACATTCCAATTCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR GCA 72 bp GTCTCTGACAAGAATAGCATTACCCCTCTCATGTTCTaGACCCTCTCTGGCATCAGATCGACCAAGATCCTT +
Preference number: 3 (lower is better)
Translates to: VSDKNSITPLMF*TLSGIRSTKIL
Trigger: AAGGATCTTGGTCGATCTGATGCCAGAGAGGGTGCAGAACATGAGAGGGGTAATGCTATTCTTGTCAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR CAA 90 bp ACCCTTTTCGACTGTAGCCCTTACGGCTTGCAAAGAAATTACCAAGGTTTAAGCACGGGAATTGGAATGTaGGCCTCTGGTGGTATGGTT +
Preference number: 3 (lower is better)
Translates to: TLFDCSPYGLQRNYQGLSTGIGM*ASGGMV
Trigger: AACCATACCACCAGAGGCCAACATTCCAATTCCCGT...GCTTAAACCTTGGTAATTTCTTTGCAAGCCGTAAGGGCTACAGTCGAAAAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR CAA 90 bp TCCACTGGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCCAGACTTCACGGGAATaGGAATGTTGGCCTCTGGTG +
Preference number: 3 (lower is better)
Translates to: STGLEYCSIIWIYDKNSVQTSRE*ECWPLV
Trigger: CACCAGAGGCCAACATTCCAATTCCCGTGAAGTCTG...GACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCCAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR CAA 90 bp TTTCCACCGAATAAATATGGCAATGGCCAGCAGGACAACCACCGGAATAACCAGTGCTTGCGCACTGGCTaGAAGATGTCTATAATTTCC +
Preference number: 3 (lower is better)
Translates to: FPPNKYGNGQQDNHRNNQCLRTG*KMSIIS
Trigger: GGAAATTATAGACATCTTCAAGCCAGTGCGCAAGCA...CTGGTTATTCCGGTGGTTGTCCTGCTGGCCATTGCCATATTTATTCGGTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR TCA 72 bp CTCTTCTCCCCACTGTGTGATGAACTTTCCACTTGGTaGAAACTGCACAATCCTGCTGTTGCAGTAACCATC +
Preference number: 3 (lower is better)
Translates to: LFSPLCDELSTW*KLHNPAVAVTI
Trigger: GATGGTTACTGCAACAGCAGGATTGTGCAGTTTTCACCAAGTGGAAAGTTCATCACACAGTGGGGAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR GCA 72 bp GTTGACAGAAGTGATTCTGGTCACTGCCTGGTTGCATaGTCCTTCCCAGGATTAATACAGGGCCTTCTTTAT +
Preference number: 3 (lower is better)
Translates to: VDRSDSGHCLVA*SFPGLIQGLLY
Trigger: ATAAAGAAGGCCCTGTATTAATCCTGGGAAGGAGCATGCAACCAGGCAGTGACCAGAATCACTTCTGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR TCA 72 bp TTCTCAGTCAAGGTGAACTTCCACACGGTGTTGGTATaGGCATCTCCAATGTACACAGTCCCATCTTCAGAT +
Preference number: 3 (lower is better)
Translates to: FSVKVNFHTVLV*ASPMYTVPSSD
Trigger: ATCTGAAGATGGGACTGTGTACATTGGAGATGCTCATACCAACACCGTGTGGAAGTTCACCTTGACTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR GCA 72 bp CAATTGGTCCGAGTCCTATTTGCTGGTAAACAAACTTaGTGTCAAACGAGTTTCCATCCCAGACATGGTCAC +
Preference number: 3 (lower is better)
Translates to: QLVRVLFAGKQT*CQTSFHPRHGH
Trigger: GTGACCATGTCTGGGATGGAAACTCGTTTGACAGCAAGTTTGTTTACCAGCAAATAGGACTCGGACCAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CCA 72 bp GGTGGTATGGTTCTGAACATATCTGGAGCTACATTCTaGGTACAGGTCATGAAAGAAACTGCATGCTTGGCT +
Preference number: 3 (lower is better)
Translates to: GGMVLNISGATF*VQVMKETACLA
Trigger: AGCCAAGCATGCAGTTTCTTTCATGACCTGTACCCAGAATGTAGCTCCAGATATGTTCAGAACCATACCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR TCA 72 bp ATGTACACAGTCCCATCTTCAGATGCAACAATATCATaGGGCATATCAAAGTGCTTGCGCACTGGCTTGAAG +
Preference number: 3 (lower is better)
Translates to: MYTVPSSDATIS*GISKCLRTGLK
Trigger: CTTCAAGCCAGTGCGCAAGCACTTTGATATGCCTCATGATATTGTTGCATCTGAAGATGGGACTGTGTACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CCA 72 bp AATGTTGGCCTCTGGTGGTATGGTTCTGAACATATCTaGAGCTACATTCTGGGTACAGGTCATGAAAGAAAC +
Preference number: 3 (lower is better)
Translates to: NVGLWWYGSEHI*SYILGTGHERN
Trigger: GTTTCTTTCATGACCTGTACCCAGAATGTAGCTCCAGATATGTTCAGAACCATACCACCAGAGGCCAACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CCA 72 bp CATATCAGACTTCACGGGAATTGGAATGTTGGCCTCTaGTGGTATGGTTCTGAACATATCTGGAGCTACATT +
Preference number: 3 (lower is better)
Translates to: HIRLHGNWNVGL*WYGSEHIWSYI
Trigger: AATGTAGCTCCAGATATGTTCAGAACCATACCACCAGAGGCCAACATTCCAATTCCCGTGAAGTCTGATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR-3UTR CAA 90 bp ACATTTGCAATCTCAGCTACCAGGTCTGACTCTGATTCTGCCTTTTCTGTAGGACTTCTTCTTCTCGTTTaGGCTGCTGTAGTAAAGGAA +
Preference number: 3 (lower is better)
Translates to: TFAISATRSDSDSAFSVGLLLLV*AAVVKE
Trigger: TTCCTTTACTACAGCAGCCAAAACGAGAAGAAGAAG...TCCTACAGAAAAGGCAGAATCAGAGTCAGACCTGGTAGCTGAGATTGCAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR TCA 72 bp ACTTCCCTTTCCTCTAAATCTTCCCAGTACTCTTCCTaGACTCGTCTCGAGTTTGTGTTCAGAATCTCCAAA +
Preference number: 3 (lower is better)
Translates to: TSLSSKSSQYSS*TRLEFVFRISK
Trigger: TTTGGAGATTCTGAACACAAACTCGAGACGAGTTCAGGAAGAGTACTGGGAAGATTTAGAGGAAAGGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR GCA 72 bp ATGAGCATCTCCAATGTACACAGTCCCATCTTCAGATaGAACAATATCATGAGGCATATCAAAGTGCTTGCG +
Preference number: 3 (lower is better)
Translates to: MSISNVHSPIFR*NNIMRHIKVLA
Trigger: CGCAAGCACTTTGATATGCCTCATGATATTGTTGCATCTGAAGATGGGACTGTGTACATTGGAGATGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CCA 72 bp TCTGTTTCTCTTGCATCTTCTGCAATTCTGAGGAGGTaGGTTTGTTCTCCATTTTGGTTTCAACAACTGCCT +
Preference number: 3 (lower is better)
Translates to: SVSLASSAILRR*VCSPFWFQQLP
Trigger: AGGCAGTTGTTGAAACCAAAATGGAGAACAAACCCACCTCCTCAGAATTGCAGAAGATGCAAGAGAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CCA 72 bp TTACTTTCCAGGCTACCATCTTTAATTAACCCAGGTTaGCAGAATAAAGGTGGAGTGCTAGGACAGGATTGT +
Preference number: 3 (lower is better)
Translates to: LLSRLPSLINPG*QNKGGVLGQDC
Trigger: ACAATCCTGTCCTAGCACTCCACCTTTATTCTGCCAACCTGGGTTAATTAAAGATGGTAGCCTGGAAAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438793.7
3UTR-3UTR CAA 90 bp CATTCATTACTTTCCAGGCTACCATCTTTAATTAACCCAGGTTGGCAGAATAAACTGGAGTACAGTGGATaGATCATAGCTCACTGCAGC +
Preference number: 3 (lower is better)
Translates to: HSLLSRLPSLINPGWQNKLEYSG*IIAHCS
Trigger: GCTGCAGTGAGCTATGATCAATCCACTGTACTCCAG...TTTATTCTGCCAACCTGGGTTAATTAAAGATGGTAGCCTGGAAAGTAATGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438793.7
3UTR-3UTR CAA 90 bp CATTCATTACTTTCCAGGCTACCATCTTTAATTAACCCAGGTTGGCAGAATAAAAAACAATCCTTCTGCTaGGCCTCCCACAATCCTTCT +
Preference number: 3 (lower is better)
Translates to: HSLLSRLPSLINPGWQNKKQSFC*ASHNPS
Trigger: AGAAGGATTGTGGGAGGCCAAGCAGAAGGATTGTTT...TTTATTCTGCCAACCTGGGTTAATTAAAGATGGTAGCCTGGAAAGTAATGAATG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000438793.7
3UTR TCA 72 bp TTTGATTTCCTGGACCTCAATGCCAGCCTTTTTAACTaGTCGATGTTCCAATTTCTCAGTCAAGGTGAACTT +
Preference number: 3 (lower is better)
Translates to: FDFLDLNASLFN*SMFQFLSQGEL
Trigger: AAGTTCACCTTGACTGAGAAATTGGAACATCGATCAGTTAAAAAGGCTGGCATTGAGGTCCAGGAAATCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR TCA 72 bp GAAGTTCAGCCAAGAATAATCAGTGGAAAGATTGCCTaGAGTCAATGTCATTCATTACTTTCCAGGCTACCA +
Preference number: 3 (lower is better)
Translates to: EVQPRIISGKIA*SQCHSLLSRLP
Trigger: TGGTAGCCTGGAAAGTAATGAATGACATTGACTTCAGGCAATCTTTCCACTGATTATTCTTGGCTGAACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438793.7
3UTR GCA 72 bp CCCTGGTCTAACACTTCTTCTTCTTCTCGTTTTGGCTaGTGTAGTAAAGGAATCTTATCTTTATATTCTGTT +
Preference number: 3 (lower is better)
Translates to: PWSNTSSSSRFG*CSKGILSLYSV
Trigger: AACAGAATATAAAGATAAGATTCCTTTACTACAGCAGCCAAAACGAGAAGAAGAAGAAGTGTTAGACCAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CCA 72 bp ATTTGGATCTATGACAAGAATAGTGTCTTCTTCAATTaGTCCGAGTCCTATTTGCTGGTAAACAAACTTGCT +
Preference number: 3 (lower is better)
Translates to: IWIYDKNSVFFN*SESYLLVNKLA
Trigger: AGCAAGTTTGTTTACCAGCAAATAGGACTCGGACCAATTGAAGAAGACACTATTCTTGTCATAGATCCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp TTTCCACCGAATAAATATGGCAATGGCCAGCAGGACAACCACCGGAATAACCAGGCGAGAGCAGCGAGCTaGCCGCGGCGAGGCGTCTCG +
Preference number: 4 (lower is better)
Translates to: FPPNKYGNGQQDNHRNNQARAAS*PRRGVS
Trigger: CGAGACGCCTCGCCGCGGCCAGCTCGCTGCTCTCGC...CTGGTTATTCCGGTGGTTGTCCTGCTGGCCATTGCCATATTTATTCGGTGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR GCA 90 bp TCCGAGTCCTATTTGCTGGTAAACAAACTTGCTGTCAAACGAGTTTCCATCCCAGCACGGCGGGCGTCCTaGGGCGGCCACACACCATCC +
Preference number: 4 (lower is better)
Translates to: SESYLLVNKLAVKRVSIPARRAS*GGHTPS
Trigger: GGATGGTGTGTGGCCGCCGCAGGACGCCCGCCGTGC...TGGGATGGAAACTCGTTTGACAGCAAGTTTGTTTACCAGCAAATAGGACTCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp TCCGACCATTTTCCCGGTCTGCCACACATAATTGGCCCAAAAGAGGCACAAGAGAAAGCCTGTGGCAGCTaGGGGCTCTGCCGTCCAATC +
Preference number: 4 (lower is better)
Translates to: SDHFPGLPHIIGPKEAQEKACGS*GLCRPI
Trigger: GATTGGACGGCAGAGCCCTCAGCTGCCACAGGCTTT...CTCTTGTGCCTCTTTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp ACATTTGCAATCTCAGCTACCAGGTCTGACTCTGATTCTGCCTTTTCTGTAGGAGCAGCCGCTACTTCATaGCCCGGGCACGGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: TFAISATRSDSDSAFSVGAAATS*PGHGGR
Trigger: ACGCCCGCCGTGCCCGGGCCATGAAGTAGCGGCTGC...TCCTACAGAAAAGGCAGAATCAGAGTCAGACCTGGTAGCTGAGATTGCAAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CAA 72 bp GGCTCCAGTGCCTGGATCCACAGCCACATCAGTGGGTaGACAGAAGTGATTCTGGTCACTGCCTGGTTGCAT +
Preference number: 4 (lower is better)
Translates to: GSSAWIHSHISG*TEVILVTAWLH
Trigger: ATGCAACCAGGCAGTGACCAGAATCACTTCTGTCAACCCACTGATGTGGCTGTGGATCCAGGCACTGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp TTAAAACACTGGATCCGACCATTTTCCCGGTCTGCCACACATAATTGGCCCAAACGCGCGGGTGCCTTATaGCTCCGGAATGACAGGGGC +
Preference number: 4 (lower is better)
Translates to: LKHWIRPFSRSATHNWPKRAGAL*LRNDRG
Trigger: GCCCCTGTCATTCCGGAGTCATAAGGCACCCGCGCG...TTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGATCCAGTGTTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR GCA 90 bp GGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCTTCTTCCCAGCGCCGCTCGCGTaGCCTGGCGCTGGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: GLEYCSIIWIYDKNSVFFPAPLA*PGAGAR
Trigger: TCTAGCCCCAGCGCCAGGGCACGCGAGCGGCGCTGG...GAAGAAGACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp CCACAGCCACATCAGTGGGTTGACAGAAGTGATTCTGGTCACTGCCTGGTTGCAACAAGAGCCAAGCTGTaGGGAACAGTGAACTGGCCT +
Preference number: 4 (lower is better)
Translates to: PQPHQWVDRSDSGHCLVATRAKL*GTVNWP
Trigger: AGGCCAGTTCACTGTTCCTCACAGCTTGGCTCTTGT...TGCAACCAGGCAGTGACCAGAATCACTTCTGTCAACCCACTGATGTGGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CAA 72 bp ACAATCCTTCTGCTTGGCCTCCCACAATCCTTCTGCTaGGCCTCCCAAAGTCCTGGAAGTATAGGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: TILLLGLPQSFC*ASQSPGSIGLS
Trigger: GCTCAAGCCTATACTTCCAGGACTTTGGGAGGCCAAGCAGAAGGATTGTGGGAGGCCAAGCAGAAGGATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438793.7
CDS-3UTR CCA 90 bp CCACAGCCACATCAGTGGGTTGACAGAAGTGATTCTGGTCACTGCCTGGTTGCAAGACTTCACGGGAATTaGAATGTTGGCCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PQPHQWVDRSDSGHCLVARLHGN*NVGLWW
Trigger: CCACCAGAGGCCAACATTCCAATTCCCGTGAAGTCT...TGCAACCAGGCAGTGACCAGAATCACTTCTGTCAACCCACTGATGTGGCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp ACATTTGCAATCTCAGCTACCAGGTCTGACTCTGATTCTGCCTTTTCTGTAGGAGCGGGCAAAAAGCCGTaGGCAGGCGGGACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: TFAISATRSDSDSAFSVGAGKKP*AGGTFV
Trigger: GACAAAAGTCCCGCCTGCCCACGGCTTTTTGCCCGC...TCCTACAGAAAAGGCAGAATCAGAGTCAGACCTGGTAGCTGAGATTGCAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp ATAACCAGAAGGGTTGTAATGAGAACAACAGGCACTCCCGAGCCTGGCTCTTTGAATGGCTCCAGTGCCTaGATCCACAGCCACATCAGT +
Preference number: 4 (lower is better)
Translates to: ITRRVVMRTTGTPEPGSLNGSSA*IHSHIS
Trigger: ACTGATGTGGCTGTGGATCCAGGCACTGGAGCCATT...CAAAGAGCCAGGCTCGGGAGTGCCTGTTGTTCTCATTACAACCCTTCTGGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp CCACAGCCACATCAGTGGGTTGACAGAAGTGATTCTGGTCACTGCCTGGTTGCATCGGCTTTGATTTCCTaGACCTCAATGCCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: PQPHQWVDRSDSGHCLVASALIS*TSMPAF
Trigger: AAAGGCTGGCATTGAGGTCCAGGAAATCAAAGCCGA...TGCAACCAGGCAGTGACCAGAATCACTTCTGTCAACCCACTGATGTGGCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp TCCGACCATTTTCCCGGTCTGCCACACATAATTGGCCCAAAAGAGGCACAAGAGATTTCTCAGTCAAGGTaGACTTCCACACGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SDHFPGLPHIIGPKEAQEISQSR*TSTRCW
Trigger: CCAACACCGTGTGGAAGTTCACCTTGACTGAGAAAT...CTCTTGTGCCTCTTTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR GCA 90 bp CCTTCACCAGTGAATACACATCTTGCAGCCAGTAGGTCACCAAAACTTACATCAGGCCTGGCAGAGGACTaGTCCCTGAAGACTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PSPVNTHLAASRSPKLTSGLAED*SLKTLL
Trigger: GAGAAGAGTCTTCAGGGAGCAGTCCTCTGCCAGGCC...TGATGTAAGTTTTGGTGACCTACTGGCTGCAAGATGTGTATTCACTGGTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp CCACAGCCACATCAGTGGGTTGACAGAAGTGATTCTGGTCACTGCCTGGTTGCAACTTCCACACGGTGTTaGTATGAGCATCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: PQPHQWVDRSDSGHCLVATSTRC*YEHLQC
Trigger: ACATTGGAGATGCTCATACCAACACCGTGTGGAAGT...TGCAACCAGGCAGTGACCAGAATCACTTCTGTCAACCCACTGATGTGGCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp TCCGACCATTTTCCCGGTCTGCCACACATAATTGGCCCAAAAGAGGCACAAGAGGAACTTTCCACTTGGTaGAAACTGCACAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: SDHFPGLPHIIGPKEAQEELSTW*KLHNPA
Trigger: AGCAGGATTGTGCAGTTTTCACCAAGTGGAAAGTTC...CTCTTGTGCCTCTTTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp CCACAGCCACATCAGTGGGTTGACAGAAGTGATTCTGGTCACTGCCTGGTTGCAGCCAGCCTTTTTAACTaGTCGATGTTCCAATTTCTC +
Preference number: 4 (lower is better)
Translates to: PQPHQWVDRSDSGHCLVAASLFN*SMFQFL
Trigger: GAGAAATTGGAACATCGATCAGTTAAAAAGGCTGGC...TGCAACCAGGCAGTGACCAGAATCACTTCTGTCAACCCACTGATGTGGCTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR GCA 90 bp ATAACCAGAAGGGTTGTAATGAGAACAACAGGCACTCCCGAGCCTGGCTCTTTGCCACTTGGTGAAAACTaGACAATCCTGCTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: ITRRVVMRTTGTPEPGSLPLGEN*TILLLQ
Trigger: CTGCAACAGCAGGATTGTGCAGTTTTCACCAAGTGG...CAAAGAGCCAGGCTCGGGAGTGCCTGTTGTTCTCATTACAACCCTTCTGGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp ATAACCAGAAGGGTTGTAATGAGAACAACAGGCACTCCCGAGCCTGGCTCTTTGGAACTACGGGTCTGGTaGTACCAAGACATTCATTGG +
Preference number: 4 (lower is better)
Translates to: ITRRVVMRTTGTPEPGSLELRVW*YQDIHW
Trigger: CCAATGAATGTCTTGGTACCACCAGACCCGTAGTTC...CAAAGAGCCAGGCTCGGGAGTGCCTGTTGTTCTCATTACAACCCTTCTGGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp AACAGGCACTCCCGAGCCTGGCTCTTTGATCAGTTTCTGTTTCTCTTGCATCTTTGCCACCAATGTGTGTaGCTTCTGTCCTTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: NRHSRAWLFDQFLFLLHLCHQCV*LLSFLH
Trigger: GTGAAGGAAGGACAGAAGCCACACACATTGGTGGCA...AAGATGCAAGAGAAACAGAAACTGATCAAAGAGCCAGGCTCGGGAGTGCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp TTTCCACCGAATAAATATGGCAATGGCCAGCAGGACAACCACCGGAATAACCAGCGGGAATTGGAATGTTaGCCTCTGGTGGTATGGTTC +
Preference number: 4 (lower is better)
Translates to: FPPNKYGNGQQDNHRNNQRELEC*PLVVWF
Trigger: GAACCATACCACCAGAGGCCAACATTCCAATTCCCG...CTGGTTATTCCGGTGGTTGTCCTGCTGGCCATTGCCATATTTATTCGGTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR GCA 90 bp TTAAAACACTGGATCCGACCATTTTCCCGGTCTGCCACACATAATTGGCCCAAAAGTGATTCTGGTCACTaGCTGGTTGCATGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LKHWIRPFSRSATHNWPKSDSGH*LVACSF
Trigger: GAAGGAGCATGCAACCAGGCAGTGACCAGAATCACT...TTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGATCCAGTGTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp TTAAAACACTGGATCCGACCATTTTCCCGGTCTGCCACACATAATTGGCCCAAATCTGGGTACAGGTCATaGAAGAAACTGCATGCTTGG +
Preference number: 4 (lower is better)
Translates to: LKHWIRPFSRSATHNWPKSGYRS*KKLHAW
Trigger: CCAAGCATGCAGTTTCTTTCATGACCTGTACCCAGA...TTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGATCCAGTGTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp ACATTTGCAATCTCAGCTACCAGGTCTGACTCTGATTCTGCCTTTTCTGTAGGATCTTGGTCCCCAAAATaGGGCTTCCCATTCACTGCA +
Preference number: 4 (lower is better)
Translates to: TFAISATRSDSDSAFSVGSWSPK*GFPFTA
Trigger: TGCAGTGAATGGGAAGCCTCATTTTGGGGACCAAGA...TCCTACAGAAAAGGCAGAATCAGAGTCAGACCTGGTAGCTGAGATTGCAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp TCCACTGGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCCAACTGCCTCGGCTTTaGTTTCCTGGACCTCAATGC +
Preference number: 4 (lower is better)
Translates to: STGLEYCSIIWIYDKNSVQLPRL*FPGPQC
Trigger: GCATTGAGGTCCAGGAAATCAAAGCCGAGGCAGTTG...GACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCCAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR GCA 90 bp TCCGAGTCCTATTTGCTGGTAAACAAACTTGCTGTCAAACGAGTTTCCATCCCACATAAATGGCTCCAGTaGCTGGATCCACAGCCACAT +
Preference number: 4 (lower is better)
Translates to: SESYLLVNKLAVKRVSIPHKWLQ*LDPQPH
Trigger: ATGTGGCTGTGGATCCAGGCACTGGAGCCATTTATG...TGGGATGGAAACTCGTTTGACAGCAAGTTTGTTTACCAGCAAATAGGACTCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAAGGGTAGAAAGCCTGTaGCAGCTGAGGGCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNERVESL*QLRALP
Trigger: CGGCAGAGCCCTCAGCTGCCACAGGCTTTCTACCCT...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp ATAACCAGAAGGGTTGTAATGAGAACAACAGGCACTCCCGAGCCTGGCTCTTTGACATGGTCACCTCTGTaGAAAATCACCAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: ITRRVVMRTTGTPEPGSLTWSPL*KITRLF
Trigger: GAATAACCTGGTGATTTTCCACAGAGGTGACCATGT...CAAAGAGCCAGGCTCGGGAGTGCCTGTTGTTCTCATTACAACCCTTCTGGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp TCCGACCATTTTCCCGGTCTGCCACACATAATTGGCCCAAAAGAGGCACAAGAGGCCTTCTTTATTGTTTaGATCCAGTTTGAACACCTG +
Preference number: 4 (lower is better)
Translates to: SDHFPGLPHIIGPKEAQEAFFIV*IQFEHL
Trigger: CAGGTGTTCAAACTGGATCCAAACAATAAAGAAGGC...CTCTTGTGCCTCTTTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp TTTCCACCGAATAAATATGGCAATGGCCAGCAGGACAACCACCGGAATAACCAGCATCTGATACATAAATaGCTCCAGTGCCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: FPPNKYGNGQQDNHRNNQHLIHK*LQCLDP
Trigger: TGGATCCAGGCACTGGAGCCATTTATGTATCAGATG...CTGGTTATTCCGGTGGTTGTCCTGCTGGCCATTGCCATATTTATTCGGTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp ATAACCAGAAGGGTTGTAATGAGAACAACAGGCACTCCCGAGCCTGGCTCTTTGGTTTGTTCTCCATTTTaGTTTCAACAACTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: ITRRVVMRTTGTPEPGSLVCSPF*FQQLPR
Trigger: CCGAGGCAGTTGTTGAAACCAAAATGGAGAACAAAC...CAAAGAGCCAGGCTCGGGAGTGCCTGTTGTTCTCATTACAACCCTTCTGGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGCTGTGGCAGACGTGTaGGGTGTAAGGACACACCAG +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNEAVADV*GVRTHQ
Trigger: CTGGTGTGTCCTTACACCTCACACGTCTGCCACAGC...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp GGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCTTCTTCTCCAGTTTGAACACCTaGTGGAGAGCCACGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GLEYCSIIWIYDKNSVFFSSLNT*WRATSV
Trigger: CACAGACGTGGCTCTCCATCAGGTGTTCAAACTGGA...GAAGAAGACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp ACATTTGCAATCTCAGCTACCAGGTCTGACTCTGATTCTGCCTTTTCTGTAGGACACACGGTGTTGGTATaGGCATCTCCAATGTACACA +
Preference number: 4 (lower is better)
Translates to: TFAISATRSDSDSAFSVGHTVLV*ASPMYT
Trigger: TGTGTACATTGGAGATGCTCATACCAACACCGTGTG...TCCTACAGAAAAGGCAGAATCAGAGTCAGACCTGGTAGCTGAGATTGCAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp GATTTAGCAGCTTTGTCGTCATGTAGCACAAAGTTTCTCTTTACTGCCACAGGCATTTCTCAGTCAAGGTaGACTTCCACACGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: DLAALSSCSTKFLFTATGISQSR*TSTRCW
Trigger: CCAACACCGTGTGGAAGTTCACCTTGACTGAGAAAT...GCCTGTGGCAGTAAAGAGAAACTTTGTGCTACATGACGACAAAGCTGCTAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379799.7
ENST00000504691.1
CDS-3UTR GCA 90 bp TCCACTGGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCTCACCAGGTGGGGGCTaGTGTAATGAGAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: STGLEYCSIIWIYDKNSVSPGGG*CNEKTL
Trigger: CAGAGTTTTCTCATTACAGCAGCCCCCACCTGGTGA...GACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCCAGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR GCA 90 bp GGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCTTCTTCTGGTCACTGCCTGGTTaGATGCTCCTTCCCAGGATT +
Preference number: 4 (lower is better)
Translates to: GLEYCSIIWIYDKNSVFFWSLPG*MLLPRI
Trigger: AATCCTGGGAAGGAGCATGCAACCAGGCAGTGACCA...GAAGAAGACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR GCA 90 bp GATTTAGCAGCTTTGTCGTCATGTAGCACAAAGTTTCTCTTTACTGCCACAGGCCCACTTGGTGAAAACTaGACAATCCTGCTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: DLAALSSCSTKFLFTATGPLGEN*TILLLQ
Trigger: CTGCAACAGCAGGATTGTGCAGTTTTCACCAAGTGG...GCCTGTGGCAGTAAAGAGAAACTTTGTGCTACATGACGACAAAGCTGCTAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379799.7
CDS-3UTR GCA 90 bp GATTTAGCAGCTTTGTCGTCATGTAGCACAAAGTTTCTCTTTACTGCCACAGGCAGGCTTCCCATTCACTaGAAAGAGCAAGCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: DLAALSSCSTKFLFTATGRLPIH*KEQAWY
Trigger: ATACCAGGCTTGCTCTTTGCAGTGAATGGGAAGCCT...GCCTGTGGCAGTAAAGAGAAACTTTGTGCTACATGACGACAAAGCTGCTAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CCA 90 bp TTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAAATAGGGTAGAAAGCCTGTaGCAGCTGAGGGCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: LGNSSTRNRSQLNQNEVNRVESL*QLRALP
Trigger: CGGCAGAGCCCTCAGCTGCCACAGGCTTTCTACCCT...ATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp GATTTAGCAGCTTTGTCGTCATGTAGCACAAAGTTTCTCTTTACTGCCACAGGCGAAAACTCTGCTCTCTaGTGGCCTCAAGGTAGATAC +
Preference number: 4 (lower is better)
Translates to: DLAALSSCSTKFLFTATGENSAL*WPQGRY
Trigger: GTATCTACCTTGAGGCCACCAGAGAGCAGAGTTTTC...GCCTGTGGCAGTAAAGAGAAACTTTGTGCTACATGACGACAAAGCTGCTAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379799.7
CDS-3UTR CCA 90 bp TTAAAACACTGGATCCGACCATTTTCCCGGTCTGCCACACATAATTGGCCCAAAGCAATTCTGAGGAGGTaGGTTTGTTCTCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: LKHWIRPFSRSATHNWPKAILRR*VCSPFW
Trigger: CCAAAATGGAGAACAAACCCACCTCCTCAGAATTGC...TTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGATCCAGTGTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp GGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCTTCTTCAGGCACTCCCGAGCCTaGCTCTTTGATCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: GLEYCSIIWIYDKNSVFFRHSRA*LFDQFL
Trigger: CAGAAACTGATCAAAGAGCCAGGCTCGGGAGTGCCT...GAAGAAGACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp ACCCTTTTCGACTGTAGCCCTTACGGCTTGCAAAGAAATTACCAAGGTTTAAGCTCATCCTCTTTCTCTTaGTCACTGCCCTCAGTGCTA +
Preference number: 4 (lower is better)
Translates to: TLFDCSPYGLQRNYQGLSSSSFS*SLPSVL
Trigger: TAGCACTGAGGGCAGTGACCAAGAGAAAGAGGATGA...GCTTAAACCTTGGTAATTTCTTTGCAAGCCGTAAGGGCTACAGTCGAAAAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
3UTR CAA 72 bp TTCTGCAATTCTGAGGAGGTGGGTTTGTTCTCCATTTaGGTTTCAACAACTGCCTCGGCTTTGATTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FCNSEEVGLFSI*VSTTASALISW
Trigger: CCAGGAAATCAAAGCCGAGGCAGTTGTTGAAACCAAAATGGAGAACAAACCCACCTCCTCAGAATTGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp TCCACTGGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCTGTTTGGATCCAGTTTaGACACCTGATGGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: STGLEYCSIIWIYDKNSVCLDPV*TPDGEP
Trigger: TGGCTCTCCATCAGGTGTTCAAACTGGATCCAAACA...GACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCCAGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAAAGCTGTGAGGAACAGTaGACTGGCCTGGCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTESCEEQ*TGLAED
Trigger: GTCCTCTGCCAGGCCAGTTCACTGTTCCTCACAGCT...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR TCA 90 bp TTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAAATAGCTGTGAGGAACAGTaGACTGGCCTGGCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: LGNSSTRNRSQLNQNEVNSCEEQ*TGLAED
Trigger: GTCCTCTGCCAGGCCAGTTCACTGTTCCTCACAGCT...ATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR TCA 90 bp TTTCCACCGAATAAATATGGCAATGGCCAGCAGGACAACCACCGGAATAACCAGACAATGGCACTGTTATaGACTTTTAGGAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: FPPNKYGNGQQDNHRNNQTMALL*TFRKLL
Trigger: GAGGAGTTTCCTAAAAGTTCATAACAGTGCCATTGT...CTGGTTATTCCGGTGGTTGTCCTGCTGGCCATTGCCATATTTATTCGGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR GCA 90 bp ACCCTTTTCGACTGTAGCCCTTACGGCTTGCAAAGAAATTACCAAGGTTTAAGCCACCACTTTTTCTCCTaGTGGGATAACAGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: TLFDCSPYGLQRNYQGLSHHFFS*WDNSVN
Trigger: GTTGACACTGTTATCCCAGCAGGAGAAAAAGTGGTG...GCTTAAACCTTGGTAATTTCTTTGCAAGCCGTAAGGGCTACAGTCGAAAAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR GCA 90 bp TACTGTGTTCAAGCAAAGAATGGGGTTATTTACATCCACCAAAAAGTCTCAAAAGGCCTGGCAGAGGACTaGTCCCTGAAGACTCTTCTC +
Preference number: 4 (lower is better)
Translates to: YCVQAKNGVIYIHQKVSKGLAED*SLKTLL
Trigger: GAGAAGAGTCTTCAGGGAGCAGTCCTCTGCCAGGCC...TTTTGAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR GCA 90 bp AACAGGCACTCCCGAGCCTGGCTCTTTGATCAGTTTCTGTTTCTCTTGCATCTTAGTCCCATCTTCAGATaGAACAATATCATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: NRHSRAWLFDQFLFLLHLSPIFR*NNIMRH
Trigger: ATGCCTCATGATATTGTTGCATCTGAAGATGGGACT...AAGATGCAAGAGAAACAGAAACTGATCAAAGAGCCAGGCTCGGGAGTGCCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp GATTTAGCAGCTTTGTCGTCATGTAGCACAAAGTTTCTCTTTACTGCCACAGGCTGGAATGTTGGCCTCTaGTGGTATGGTTCTGAACAT +
Preference number: 4 (lower is better)
Translates to: DLAALSSCSTKFLFTATGWNVGL*WYGSEH
Trigger: ATGTTCAGAACCATACCACCAGAGGCCAACATTCCA...GCCTGTGGCAGTAAAGAGAAACTTTGTGCTACATGACGACAAAGCTGCTAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379799.7
CDS-3UTR CCA 90 bp GTTCTGAACATATCTGGAGCTACATTCTGGGTACAGGTCATGAAAGAAACTGCAGAAAACTCTGCTCTCTaGTGGCCTCAAGGTAGATAC +
Preference number: 4 (lower is better)
Translates to: VLNISGATFWVQVMKETAENSAL*WPQGRY
Trigger: GTATCTACCTTGAGGCCACCAGAGAGCAGAGTTTTC...TGCAGTTTCTTTCATGACCTGTACCCAGAATGTAGCTCCAGATATGTTCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTACAAGAGCCAAGCTGTaGGGAACAGTGAACTGGCCT +
Preference number: 4 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELTRAKL*GTVNWP
Trigger: AGGCCAGTTCACTGTTCCTCACAGCTTGGCTCTTGT...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR TCA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTCTGCCTCGGCTTCTTTaGTTTCCTGGACCTCAATGC +
Preference number: 4 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELLPRLL*FPGPQC
Trigger: GCATTGAGGTCCAGGAAATCAAAGAAGCCGAGGCAG...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504691.1
CDS-3UTR GCA 90 bp TTAAAACACTGGATCCGACCATTTTCCCGGTCTGCCACACATAATTGGCCCAAAGCTGGTAAACAAACTTaGTGTCAAACGAGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LKHWIRPFSRSATHNWPKAGKQT*CQTSFH
Trigger: ATGGAAACTCGTTTGACAGCAAGTTTGTTTACCAGC...TTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGATCCAGTGTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR GCA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTTGGTCACTGCCTGGTTaGATGCTCCTTCCCAGGATT +
Preference number: 4 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELWSLPG*MLLPRI
Trigger: AATCCTGGGAAGGAGCATGCAACCAGGCAGTGACCA...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR GCA 90 bp GGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCTTCTTCAGGCTTCCCATTCACTaGAAAGAGCAAGCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: GLEYCSIIWIYDKNSVFFRLPIH*KEQAWY
Trigger: ATACCAGGCTTGCTCTTTGCAGTGAATGGGAAGCCT...GAAGAAGACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR GCA 90 bp TCCGAGTCCTATTTGCTGGTAAACAAACTTGCTGTCAAACGAGTTTCCATCCCAGTAGCCCTTACGGCTTaGAAAGAAATTACCAAGGTT +
Preference number: 4 (lower is better)
Translates to: SESYLLVNKLAVKRVSIPVALTA*KEITKV
Trigger: AACCTTGGTAATTTCTTTGCAAGCCGTAAGGGCTAC...TGGGATGGAAACTCGTTTGACAGCAAGTTTGTTTACCAGCAAATAGGACTCGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp ACCCTTTTCGACTGTAGCCCTTACGGCTTGCAAAGAAATTACCAAGGTTTAAGCACCAGTAACTTCCAGTaGATGAAGGCATATTGCATC +
Preference number: 4 (lower is better)
Translates to: TLFDCSPYGLQRNYQGLSTSNFQ*MKAYCI
Trigger: GATGCAATATGCCTTCATCCACTGGAAGTTACTGGT...GCTTAAACCTTGGTAATTTCTTTGCAAGCCGTAAGGGCTACAGTCGAAAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp ACCCTTTTCGACTGTAGCCCTTACGGCTTGCAAAGAAATTACCAAGGTTTAAGCAATGTTGGCCTCTGGTaGTATGGTTCTGAACATATC +
Preference number: 4 (lower is better)
Translates to: TLFDCSPYGLQRNYQGLSNVGLW*YGSEHI
Trigger: GATATGTTCAGAACCATACCACCAGAGGCCAACATT...GCTTAAACCTTGGTAATTTCTTTGCAAGCCGTAAGGGCTACAGTCGAAAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAATCTCCTGTGTGTTCTaGTTCCCAGGTGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNEISCVF*FPGAFT
Trigger: GGTGAAGGCACCTGGGAACCAGAACACACAGGAGAT...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAAATGGCTCCAGTGCCTaGATCCACAGCCACATCAGT +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNENGSSA*IHSHIS
Trigger: ACTGATGTGGCTGTGGATCCAGGCACTGGAGCCATT...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
3UTR CAA 72 bp ATCATAACCATATCAGACTTCACGGGAATTGGAATGTaGGCCTCTGGTGGTATGGTTCTGAACATATCTGGA +
Preference number: 4 (lower is better)
Translates to: IITISDFTGIGM*ASGGMVLNISG
Trigger: TCCAGATATGTTCAGAACCATACCACCAGAGGCCAACATTCCAATTCCCGTGAAGTCTGATATGGTTATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp TACTGTGTTCAAGCAAAGAATGGGGTTATTTACATCCACCAAAAAGTCTCAAAATCCAGTTTGAACACCTaGTGGAGAGCCACGTCTGTG +
Preference number: 4 (lower is better)
Translates to: YCVQAKNGVIYIHQKVSKSSLNT*WRATSV
Trigger: CACAGACGTGGCTCTCCATCAGGTGTTCAAACTGGA...TTTTGAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR TCA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTTCCCAGTACTCTTCCTaGACTCGTCTCGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELSQYSS*TRLEFV
Trigger: CACAAACTCGAGACGAGTTCAGGAAGAGTACTGGGA...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR TCA 90 bp TCCGAGTCCTATTTGCTGGTAAACAAACTTGCTGTCAAACGAGTTTCCATCCCAGAAAGACACTGGCAATaGAAGTGCTATTGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: SESYLLVNKLAVKRVSIPERHWQ*KCYWEN
Trigger: ATTTTCCCAATAGCACTTTCATTGCCAGTGTCTTTC...TGGGATGGAAACTCGTTTGACAGCAAGTTTGTTTACCAGCAAATAGGACTCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp GATTTAGCAGCTTTGTCGTCATGTAGCACAAAGTTTCTCTTTACTGCCACAGGCGAAAGACACTGGCAATaGAAGTGCTATTGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: DLAALSSCSTKFLFTATGERHWQ*KCYWEN
Trigger: ATTTTCCCAATAGCACTTTCATTGCCAGTGTCTTTC...GCCTGTGGCAGTAAAGAGAAACTTTGTGCTACATGACGACAAAGCTGCTAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379799.7
ENST00000504691.1
CDS-3UTR GCA 90 bp GTTCTGAACATATCTGGAGCTACATTCTGGGTACAGGTCATGAAAGAAACTGCAGGAAAGCCAAACAGCTaGTTGGAAAAACAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: VLNISGATFWVQVMKETAGKPNS*LEKQGE
Trigger: TTCTCCTTGTTTTTCCAAGCAGCTGTTTGGCTTTCC...TGCAGTTTCTTTCATGACCTGTACCCAGAATGTAGCTCCAGATATGTTCAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR GCA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTTCACCAGGTGGGGGCTaGTGTAATGAGAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELSPGGG*CNEKTL
Trigger: CAGAGTTTTCTCATTACAGCAGCCCCCACCTGGTGA...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR GCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAATCCAGGCCAATCCAGTaGCTCTTCCATGTGGAAATC +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNESRPIQ*LFHVEI
Trigger: GATTTCCACATGGAAGAGGCACTGGATTGGCCTGGA...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR GCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAAGTGATTCTGGTCACTaGCTGGTTGCATGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNESDSGH*LVACSF
Trigger: GAAGGAGCATGCAACCAGGCAGTGACCAGAATCACT...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR GCA 90 bp GATTTAGCAGCTTTGTCGTCATGTAGCACAAAGTTTCTCTTTACTGCCACAGGCAGTCCCATCTTCAGATaGAACAATATCATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: DLAALSSCSTKFLFTATGSPIFR*NNIMRH
Trigger: ATGCCTCATGATATTGTTGCATCTGAAGATGGGACT...GCCTGTGGCAGTAAAGAGAAACTTTGTGCTACATGACGACAAAGCTGCTAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379799.7
ENST00000504691.1
CDS-3UTR GCA 90 bp GTTCTGAACATATCTGGAGCTACATTCTGGGTACAGGTCATGAAAGAAACTGCATTTGGTTTCAACAACTaGCTCGGCTTTGATTTCCTG +
Preference number: 4 (lower is better)
Translates to: VLNISGATFWVQVMKETAFGFNN*LGFDFL
Trigger: CAGGAAATCAAAGCCGAGGCAGTTGTTGAAACCAAA...TGCAGTTTCTTTCATGACCTGTACCCAGAATGTAGCTCCAGATATGTTCAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR GCA 90 bp GATTTAGCAGCTTTGTCGTCATGTAGCACAAAGTTTCTCTTTACTGCCACAGGCAAAGTTTCTCTTTACTaGCACAGGCTAAGAATGCTG +
Preference number: 4 (lower is better)
Translates to: DLAALSSCSTKFLFTATGKVSLY*HRLRML
Trigger: CAGCATTCTTAGCCTGTGGCAGTAAAGAGAAACTTT...GCCTGTGGCAGTAAAGAGAAACTTTGTGCTACATGACGACAAAGCTGCTAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CCA 90 bp GTTCTGAACATATCTGGAGCTACATTCTGGGTACAGGTCATGAAAGAAACTGCAGGTTCTGAACATATCTaGAGCTACATTCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: VLNISGATFWVQVMKETAGSEHI*SYILGT
Trigger: TGTACCCAGAATGTAGCTCCAGATATGTTCAGAACC...TGCAGTTTCTTTCATGACCTGTACCCAGAATGTAGCTCCAGATATGTTCAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAACGGGAATTGGAATGTTaGCCTCTGGTGGTATGGTTC +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNERELEC*PLVVWF
Trigger: GAACCATACCACCAGAGGCCAACATTCCAATTCCCG...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTGTTCTGCACCCTCTCTaGCATCAGATCGACCAAGAT +
Preference number: 4 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELVLHPL*HQIDQD
Trigger: ATCTTGGTCGATCTGATGCCAGAGAGGGTGCAGAAC...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp TTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAAATATCTCCTGTGTGTTCTaGTTCCCAGGTGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: LGNSSTRNRSQLNQNEVNISCVF*FPGAFT
Trigger: GGTGAAGGCACCTGGGAACCAGAACACACAGGAGAT...ATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp TCCACTGGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCAGTGTCTTCTTCAATTaGTCCGAGTCCTATTTGCTG +
Preference number: 4 (lower is better)
Translates to: STGLEYCSIIWIYDKNSVSVFFN*SESYLL
Trigger: CAGCAAATAGGACTCGGACCAATTGAAGAAGACACT...GACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCCAGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp TTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAAATAGGCACTCCCGAGCCTaGCTCTTTGATCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LGNSSTRNRSQLNQNEVNRHSRA*LFDQFL
Trigger: CAGAAACTGATCAAAGAGCCAGGCTCGGGAGTGCCT...ATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000504691.1
CDS-3UTR TCA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTTGTTTGGATCCAGTTTaGACACCTGATGGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELCLDPV*TPDGEP
Trigger: TGGCTCTCCATCAGGTGTTCAAACTGGATCCAAACA...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR TCA 90 bp TACTGTGTTCAAGCAAAGAATGGGGTTATTTACATCCACCAAAAAGTCTCAAAATCTTGGTCCCCAAAATaGGGCTTCCCATTCACTGCA +
Preference number: 4 (lower is better)
Translates to: YCVQAKNGVIYIHQKVSKSWSPK*GFPFTA
Trigger: TGCAGTGAATGGGAAGCCTCATTTTGGGGACCAAGA...TTTTGAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR TCA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAATCTTGGTCCCCAAAATaGGGCTTCCCATTCACTGCA +
Preference number: 4 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTESWSPK*GFPFTA
Trigger: TGCAGTGAATGGGAAGCCTCATTTTGGGGACCAAGA...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR TCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAACACACGGTGTTGGTATaGGCATCTCCAATGTACACA +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNEHTVLV*ASPMYT
Trigger: TGTGTACATTGGAGATGCTCATACCAACACCGTGTG...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR TCA 90 bp TTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAAATTCCCAGTACTCTTCCTaGACTCGTCTCGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LGNSSTRNRSQLNQNEVNSQYSS*TRLEFV
Trigger: CACAAACTCGAGACGAGTTCAGGAAGAGTACTGGGA...ATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR TCA 90 bp TACTGTGTTCAAGCAAAGAATGGGGTTATTTACATCCACCAAAAAGTCTCAAAATGCTGGCTCGAGGCTTaGAGTCAACTGTTTAGGTGT +
Preference number: 4 (lower is better)
Translates to: YCVQAKNGVIYIHQKVSKCWLEA*SQLFRC
Trigger: ACACCTAAACAGTTGACTTCAAGCCTCGAGCCAGCA...TTTTGAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR GCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAATGAGAAAACTCTaGTCTCTGGTGGCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNEVMRKL*SLVASR
Trigger: CCTTGAGGCCACCAGAGAGCAGAGTTTTCTCATTAC...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR GCA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAATCCAGGCCAATCCAGTaGCTCTTCCATGTGGAAATC +
Preference number: 4 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTESRPIQ*LFHVEI
Trigger: GATTTCCACATGGAAGAGGCACTGGATTGGCCTGGA...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR GCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAACACTGCCTGGTTGCATaGTCCTTCCCAGGATTAATA +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNEHCLVA*SFPGLI
Trigger: TATTAATCCTGGGAAGGAGCATGCAACCAGGCAGTG...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR GCA 90 bp TACTGTGTTCAAGCAAAGAATGGGGTTATTTACATCCACCAAAAAGTCTCAAAACATAAATGGCTCCAGTaGCTGGATCCACAGCCACAT +
Preference number: 4 (lower is better)
Translates to: YCVQAKNGVIYIHQKVSKHKWLQ*LDPQPH
Trigger: ATGTGGCTGTGGATCCAGGCACTGGAGCCATTTATG...TTTTGAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR GCA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTAGGCTTCCCATTCACTaGAAAGAGCAAGCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELRLPIH*KEQAWY
Trigger: ATACCAGGCTTGCTCTTTGCAGTGAATGGGAAGCCT...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CCA 90 bp TACTGTGTTCAAGCAAAGAATGGGGTTATTTACATCCACCAAAAAGTCTCAAAATGCCACCAATGTGTGTaGCTTCTGTCCTTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: YCVQAKNGVIYIHQKVSKCHQCV*LLSFLH
Trigger: GTGAAGGAAGGACAGAAGCCACACACATTGGTGGCA...TTTTGAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp GGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCTTCTTCTCTGGAGCTACATTCTaGGTACAGGTCATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: GLEYCSIIWIYDKNSVFFSGATF*VQVMKE
Trigger: TTCTTTCATGACCTGTACCCAGAATGTAGCTCCAGA...GAAGAAGACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp TACTGTGTTCAAGCAAAGAATGGGGTTATTTACATCCACCAAAAAGTCTCAAAAAGACTTCACGGGAATTaGAATGTTGGCCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: YCVQAKNGVIYIHQKVSKRLHGN*NVGLWW
Trigger: CCACCAGAGGCCAACATTCCAATTCCCGTGAAGTCT...TTTTGAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAAGTTCTGCACCCTCTCTaGCATCAGATCGACCAAGAT +
Preference number: 4 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTEVLHPL*HQIDQD
Trigger: ATCTTGGTCGATCTGATGCCAGAGAGGGTGCAGAAC...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp TTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAAATGCCACCCCAGAAACCTaGCCTGGTAACAAGTATACT +
Preference number: 4 (lower is better)
Translates to: LGNSSTRNRSQLNQNEVNATPET*PGNKYT
Trigger: AGTATACTTGTTACCAGGCCAGGTTTCTGGGGTGGC...ATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp TACTGTGTTCAAGCAAAGAATGGGGTTATTTACATCCACCAAAAAGTCTCAAAAGCCACCCCAGAAACCTaGCCTGGTAACAAGTATACT +
Preference number: 4 (lower is better)
Translates to: YCVQAKNGVIYIHQKVSKATPET*PGNKYT
Trigger: AGTATACTTGTTACCAGGCCAGGTTTCTGGGGTGGC...TTTTGAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAATCATCCTCTTTCTCTTaGTCACTGCCCTCAGTGCTA +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNESSSFS*SLPSVL
Trigger: TAGCACTGAGGGCAGTGACCAAGAGAAAGAGGATGA...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR TCA 90 bp TACTGTGTTCAAGCAAAGAATGGGGTTATTTACATCCACCAAAAAGTCTCAAAATCTGGGTACAGGTCATaGAAGAAACTGCATGCTTGG +
Preference number: 4 (lower is better)
Translates to: YCVQAKNGVIYIHQKVSKSGYRS*KKLHAW
Trigger: CCAAGCATGCAGTTTCTTTCATGACCTGTACCCAGA...TTTTGAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR TCA 90 bp TACTGTGTTCAAGCAAAGAATGGGGTTATTTACATCCACCAAAAAGTCTCAAAACACACGGTGTTGGTATaGGCATCTCCAATGTACACA +
Preference number: 4 (lower is better)
Translates to: YCVQAKNGVIYIHQKVSKHTVLV*ASPMYT
Trigger: TGTGTACATTGGAGATGCTCATACCAACACCGTGTG...TTTTGAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR TCA 90 bp TACTGTGTTCAAGCAAAGAATGGGGTTATTTACATCCACCAAAAAGTCTCAAAAATTTCTCAGTCAAGGTaGACTTCCACACGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: YCVQAKNGVIYIHQKVSKISQSR*TSTRCW
Trigger: CCAACACCGTGTGGAAGTTCACCTTGACTGAGAAAT...TTTTGAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR GCA 90 bp TTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAAATGTAATGAGAAAACTCTaGTCTCTGGTGGCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: LGNSSTRNRSQLNQNEVNVMRKL*SLVASR
Trigger: CCTTGAGGCCACCAGAGAGCAGAGTTTTCTCATTAC...ATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR GCA 90 bp TACTGTGTTCAAGCAAAGAATGGGGTTATTTACATCCACCAAAAAGTCTCAAAACACTGCCTGGTTGCATaGTCCTTCCCAGGATTAATA +
Preference number: 4 (lower is better)
Translates to: YCVQAKNGVIYIHQKVSKHCLVA*SFPGLI
Trigger: TATTAATCCTGGGAAGGAGCATGCAACCAGGCAGTG...TTTTGAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAAGTGCCTCTTCCATGTaGAAATCTCCTGTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNESASSM*KSPVCS
Trigger: AGAACACACAGGAGATTTCCACATGGAAGAGGCACT...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTTCTGCCACACATAATTaGCCCAAAAGAGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELSATHN*PKRGTR
Trigger: TCTTGTGCCTCTTTTGGGCCAATTATGTGTGGCAGA...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTACTTCCACACGGTGTTaGTATGAGCATCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELTSTRC*YEHLQC
Trigger: ACATTGGAGATGCTCATACCAACACCGTGTGGAAGT...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
3UTR CAA 72 bp AAGAATAGTGTCTTCTTCAATTGGTCCGAGTCCTATTaGCTGGTAAACAAACTTGCTGTCAAACGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: KNSVFFNWSESY*LVNKLAVKRVS
Trigger: GGAAACTCGTTTGACAGCAAGTTTGTTTACCAGCAAATAGGACTCGGACCAATTGAAGAAGACACTATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTCCAAAAAGTAACATGTaGTGGACAGTATCCATGCTG +
Preference number: 4 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELPKSNM*WTVSML
Trigger: CAGCATGGATACTGTCCATCACATGTTACTTTTTGG...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAACTTCCAGTGGATaGAGGCATATTGCATCCAAA +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNEVTSSG*RHIASK
Trigger: TTTGGATGCAATATGCCTTCATCCACTGGAAGTTAC...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR TCA 90 bp TACTGTGTTCAAGCAAAGAATGGGGTTATTTACATCCACCAAAAAGTCTCAAAACTGGTGGTATGGTTCTaGACATATCTGGAGCTACAT +
Preference number: 4 (lower is better)
Translates to: YCVQAKNGVIYIHQKVSKLVVWF*TYLELH
Trigger: ATGTAGCTCCAGATATGTTCAGAACCATACCACCAG...TTTTGAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR TCA 90 bp TTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAAATCTGGTGGTATGGTTCTaGACATATCTGGAGCTACAT +
Preference number: 4 (lower is better)
Translates to: LGNSSTRNRSQLNQNEVNLVVWF*TYLELH
Trigger: ATGTAGCTCCAGATATGTTCAGAACCATACCACCAG...ATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR TCA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAAGAACTTTCCACTTGGTaGAAACTGCACAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTEELSTW*KLHNPA
Trigger: AGCAGGATTGTGCAGTTTTCACCAAGTGGAAAGTTC...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR TCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGCCAGCCTTTTTAACTaGTCGATGTTCCAATTTCTC +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNEASLFN*SMFQFL
Trigger: GAGAAATTGGAACATCGATCAGTTAAAAAGGCTGGC...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR GCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGCACAATCCTGCTGTTaGAGTAACCATCTGATACAT +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNEAQSCC*SNHLIH
Trigger: ATGTATCAGATGGTTACTGCAACAGCAGGATTGTGC...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR GCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAGCCCTTACGGCTTaGAAAGAAATTACCAAGGTT +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNEVALTA*KEITKV
Trigger: AACCTTGGTAATTTCTTTGCAAGCCGTAAGGGCTAC...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGGTTCTGAACATATCTaGAGCTACATTCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNEGSEHI*SYILGT
Trigger: TGTACCCAGAATGTAGCTCCAGATATGTTCAGAACC...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTAATGTTGGCCTCTGGTaGTATGGTTCTGAACATATC +
Preference number: 4 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELNVGLW*YGSEHI
Trigger: GATATGTTCAGAACCATACCACCAGAGGCCAACATT...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAATGGAATGTTGGCCTCTaGTGGTATGGTTCTGAACAT +
Preference number: 4 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTEWNVGL*WYGSEH
Trigger: ATGTTCAGAACCATACCACCAGAGGCCAACATTCCA...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp TCCACTGGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCTTTCTCCTAGCAGCTTaGAAAGTAGTGAATAGAAAT +
Preference number: 4 (lower is better)
Translates to: STGLEYCSIIWIYDKNSVFLLAA*KVVNRN
Trigger: ATTTCTATTCACTACTTTCCAAGCTGCTAGGAGAAA...GACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCCAGTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAACATGGTCACCTCTGTaGAAAATCACCAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNETWSPL*KITRLF
Trigger: GAATAACCTGGTGATTTTCCACAGAGGTGACCATGT...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAAGTGTCTTCTTCAATTaGTCCGAGTCCTATTTGCTG +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNESVFFN*SESYLL
Trigger: CAGCAAATAGGACTCGGACCAATTGAAGAAGACACT...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp TTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAAATCATCTGATACATAAATaGCTCCAGTGCCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: LGNSSTRNRSQLNQNEVNHLIHK*LQCLDP
Trigger: TGGATCCAGGCACTGGAGCCATTTATGTATCAGATG...ATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp TTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAAATTCTGCCACACATAATTaGCCCAAAAGAGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: LGNSSTRNRSQLNQNEVNSATHN*PKRGTR
Trigger: TCTTGTGCCTCTTTTGGGCCAATTATGTGTGGCAGA...ATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAAACTTCCACACGGTGTTaGTATGAGCATCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTETSTRC*YEHLQC
Trigger: ACATTGGAGATGCTCATACCAACACCGTGTGGAAGT...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CCA 90 bp TTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAAATGCAATTCTGAGGAGGTaGGTTTGTTCTCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: LGNSSTRNRSQLNQNEVNAILRR*VCSPFW
Trigger: CCAAAATGGAGAACAAACCCACCTCCTCAGAATTGC...ATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000504691.1
CDS-3UTR CCA 90 bp GTTCTGAACATATCTGGAGCTACATTCTGGGTACAGGTCATGAAAGAAACTGCAAGGAATCTGACATTCTaGGTAAATCTTACTCAATCT +
Preference number: 4 (lower is better)
Translates to: VLNISGATFWVQVMKETARNLTF*VNLTQS
Trigger: AGATTGAGTAAGATTTACCCAGAATGTCAGATTCCT...TGCAGTTTCTTTCATGACCTGTACCCAGAATGTAGCTCCAGATATGTTCAGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CCA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAAGCTTCTTTGATTTCCTaGACCTCAATGCCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTEASLIS*TSMPAF
Trigger: AAAGGCTGGCATTGAGGTCCAGGAAATCAAAGAAGC...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504691.1
CDS-3UTR CCA 90 bp TTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAAATTCTGCTTTGATTTCCTaGACCTCAATGCCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: LGNSSTRNRSQLNQNEVNSALIS*TSMPAF
Trigger: AAAGGCTGGCATTGAGGTCCAGGAAATCAAAGCAGA...ATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379799.7
CDS-3UTR TCA 90 bp TACTGTGTTCAAGCAAAGAATGGGGTTATTTACATCCACCAAAAAGTCTCAAAAGCCAGCCTTTTTAACTaGTCGATGTTCCAATTTCTC +
Preference number: 4 (lower is better)
Translates to: YCVQAKNGVIYIHQKVSKASLFN*SMFQFL
Trigger: GAGAAATTGGAACATCGATCAGTTAAAAAGGCTGGC...TTTTGAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR GCA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTGCTGGTAAACAAACTTaGTGTCAAACGAGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELAGKQT*CQTSFH
Trigger: ATGGAAACTCGTTTGACAGCAAGTTTGTTTACCAGC...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR GCA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTAGTCCCATCTTCAGATaGAACAATATCATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELSPIFR*NNIMRH
Trigger: ATGCCTCATGATATTGTTGCATCTGAAGATGGGACT...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR GCA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAAGTAGCCCTTACGGCTTaGAAAGAAATTACCAAGGTT +
Preference number: 4 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTEVALTA*KEITKV
Trigger: AACCTTGGTAATTTCTTTGCAAGCCGTAAGGGCTAC...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR GCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAAAAGTTTCTCTTTACTaGCACAGGCTAAGAATGCTG +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNEKVSLY*HRLRML
Trigger: CAGCATTCTTAGCCTGTGGCAGTAAAGAGAAACTTT...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR GCA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTTTTGGTTTCAACAACTaGCTCGGCTTCTTTGATTTC +
Preference number: 4 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELFGFNN*LGFFDF
Trigger: GAAATCAAAGAAGCCGAGGCAGTTGTTGAAACCAAA...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504691.1
CDS-3UTR CCA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAATCTGGAGCTACATTCTaGGTACAGGTCATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTESGATF*VQVMKE
Trigger: TTCTTTCATGACCTGTACCCAGAATGTAGCTCCAGA...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTAAAGTGCTTGCGCACTaGCTTGAAGATGTCTATAAT +
Preference number: 4 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELKVLAH*LEDVYN
Trigger: ATTATAGACATCTTCAAGCCAGTGCGCAAGCACTTT...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAAAAGTGCTTGCGCACTaGCTTGAAGATGTCTATAAT +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNEKVLAH*LEDVYN
Trigger: ATTATAGACATCTTCAAGCCAGTGCGCAAGCACTTT...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CCA 90 bp TTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAAATGTTTGTTCTCCATTTTaGTTTCAACAACTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LGNSSTRNRSQLNQNEVNVCSPF*FQQLPR
Trigger: CCGAGGCAGTTGTTGAAACCAAAATGGAGAACAAAC...ATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000504691.1
CDS-3UTR TCA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAAACAATGGCACTGTTATaGACTTTTAGGAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTETMALL*TFRKLL
Trigger: GAGGAGTTTCCTAAAAGTTCATAACAGTGCCATTGT...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR TCA 90 bp TTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAAATACAATGGCACTGTTATaGACTTTTAGGAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: LGNSSTRNRSQLNQNEVNTMALL*TFRKLL
Trigger: GAGGAGTTTCCTAAAAGTTCATAACAGTGCCATTGT...ATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR TCA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAAGAAAGACACTGGCAATaGAAGTGCTATTGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTEERHWQ*KCYWEN
Trigger: ATTTTCCCAATAGCACTTTCATTGCCAGTGTCTTTC...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR GCA 90 bp TACTGTGTTCAAGCAAAGAATGGGGTTATTTACATCCACCAAAAAGTCTCAAAAACTGGACTGGAGTACTaGAGCATTATTTGGATCTAT +
Preference number: 4 (lower is better)
Translates to: YCVQAKNGVIYIHQKVSKTGLEY*SIIWIY
Trigger: ATAGATCCAAATAATGCTGCAGTACTCCAGTCCAGT...TTTTGAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR GCA 90 bp TTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAAATACTGGACTGGAGTACTaGAGCATTATTTGGATCTAT +
Preference number: 4 (lower is better)
Translates to: LGNSSTRNRSQLNQNEVNTGLEY*SIIWIY
Trigger: ATAGATCCAAATAATGCTGCAGTACTCCAGTCCAGT...ATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR GCA 90 bp TACTGTGTTCAAGCAAAGAATGGGGTTATTTACATCCACCAAAAAGTCTCAAAAAAAGTTTCTCTTTACTaGCACAGGCTAAGAATGCTG +
Preference number: 4 (lower is better)
Translates to: YCVQAKNGVIYIHQKVSKKVSLY*HRLRML
Trigger: CAGCATTCTTAGCCTGTGGCAGTAAAGAGAAACTTT...TTTTGAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTA
37% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CCA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAAGCCTTCTTTATTGTTTaGATCCAGTTTGAACACCTG +
Preference number: 4 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTEAFFIV*IQFEHL
Trigger: CAGGTGTTCAAACTGGATCCAAACAATAAAGAAGGC...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTTGTTCAAGCAAAGAATaGGGTTATTTACATCCACCA +
Preference number: 4 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELCSSKE*GYLHPP
Trigger: TGGTGGATGTAAATAACCCCATTCTTTGCTTGAACA...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR GCA 90 bp TACTGTGTTCAAGCAAAGAATGGGGTTATTTACATCCACCAAAAAGTCTCAAAATCTTCTCGTTTTGGCTaGTGTAGTAAAGGAATCTTA +
Preference number: 4 (lower is better)
Translates to: YCVQAKNGVIYIHQKVSKSSRFG*CSKGIL
Trigger: TAAGATTCCTTTACTACAGCAGCCAAAACGAGAAGA...TTTTGAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAAGGAATCTGACATTCTaGGTAAATCTTACTCAATCT +
Preference number: 4 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNERNLTF*VNLTQS
Trigger: AGATTGAGTAAGATTTACCCAGAATGTCAGATTCCT...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CCA 90 bp TTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAAATTGTTCAAGCAAAGAATaGGGTTATTTACATCCACCA +
Preference number: 4 (lower is better)
Translates to: LGNSSTRNRSQLNQNEVNCSSKE*GYLHPP
Trigger: TGGTGGATGTAAATAACCCCATTCTTTGCTTGAACA...ATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CCA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAATGTTCAAGCAAAGAATaGGGTTATTTACATCCACCA +
Preference number: 4 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTECSSKE*GYLHPP
Trigger: TGGTGGATGTAAATAACCCCATTCTTTGCTTGAACA...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CCA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAATTTCTCCTAGCAGCTTaGAAAGTAGTGAATAGAAAT +
Preference number: 4 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTEFLLAA*KVVNRN
Trigger: ATTTCTATTCACTACTTTCCAAGCTGCTAGGAGAAA...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CCA 90 bp TTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAAATAGGAATCTGACATTCTaGGTAAATCTTACTCAATCT +
Preference number: 4 (lower is better)
Translates to: LGNSSTRNRSQLNQNEVNRNLTF*VNLTQS
Trigger: AGATTGAGTAAGATTTACCCAGAATGTCAGATTCCT...ATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS GCA 90 bp GCCGCCAGCAGCCGCTACTTCATGGCCCGGGCACGGCGGGCGTCCTaGGGCGGCCACACACCATCCGCCAGCGAGAGCAGCGAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: AASSRYFMARARRAS*GGHTPSASESSELA
Trigger: GGCCAGCTCGCTGCTCTCGCTGGCGGATGGTGTGTGGCCGCCGCAGGACGCCCGCCGTGCCCGGGCCATGAAGTAGCGGCTGCTGGCGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000304400.12
ENST00000345721.6
ENST00000346918.7
ENST00000348126.7
ENST00000438793.8
ENST00000455264.7
ENST00000505654.1
ENST00000506006.1
ENST00000509523.2
ENST00000509832.5
ENST00000510208.2
ENST00000511477.5
ENST00000511839.5
ENST00000512073.1
ENST00000513648.5
ENST00000682024.1
ENST00000682407.1
ENST00000682972.1
ENST00000684379.1
ENST00000684529.1
CDS CCA 90 bp CGTCCTGCGGCGGCCACACACCATCCGCCAGCGAGAGCAGCGAGCTaGCCGCGGCGAGGCGTCTCGGTCACGAGCGGCGGGCAAAAAGCC +
Preference number: 5 (lower is better)
Translates to: RPAAATHHPPARAAS*PRRGVSVTSGGQKA
Trigger: GGCTTTTTGCCCGCCGCTCGTGACCGAGACGCCTCGCCGCGGCCAGCTCGCTGCTCTCGCTGGCGGATGGTGTGTGGCCGCCGCAGGACG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENST00000304400.12
ENST00000345721.6
ENST00000346918.7
ENST00000348126.7
ENST00000438793.8
ENST00000455264.7
ENST00000505654.1
ENST00000506006.1
ENST00000509523.2
ENST00000509832.5
ENST00000510208.2
ENST00000511477.5
ENST00000511839.5
ENST00000512073.1
ENST00000513648.5
ENST00000682024.1
ENST00000682407.1
ENST00000682972.1
ENST00000684379.1
ENST00000684529.1
CDS CCA 90 bp CTCCGCCCTGCCTCTTTGGGCGCAGGGGGCGCGGAGCTTGGGAAGTaGAGCCCTGGCGAGTCCCCAGCGATTGCGCGCAGCTTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: LRPASLGAGGAELGK*SPGESPAIARSFPG
Trigger: CCCCGGGAAGCTGCGCGCAATCGCTGGGGACTCGCCAGGGCTCCACTTCCCAAGCTCCGCGCCCCCTGCGCCCAAAGAGGCAGGGCGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510208.2
CDS GCA 90 bp GCGATTGCGCGCAGCTTCCCGGGGTTTCCCTGCGGGGGTCGCGTGTaGTGGGTGTCTGAACTCACGCGCGGGCCAGAGGTAGCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: AIARSFPGFPCGGRV*WVSELTRGPEVAKS
Trigger: GCTCTTGGCTACCTCTGGCCCGCGCGTGAGTTCAGACACCCAGCACACGCGACCCCCGCAGGGAAACCCCGGGAAGCTGCGCGCAATCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510208.2
CDS CCA 90 bp ATTGCGCGCAGCTTCCCGGGGTTTCCCTGCGGGGGTCGCGTGTGCTaGGTGTCTGAACTCACGCGCGGGCCAGAGGTAGCCAAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: IARSFPGFPCGGRVC*VSELTRGPEVAKSW
Trigger: CCAGCTCTTGGCTACCTCTGGCCCGCGCGTGAGTTCAGACACCCAGCACACGCGACCCCCGCAGGGAAACCCCGGGAAGCTGCGCGCAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510208.2
CDS TCA 90 bp CAGCTTCCCGGGGTTTCCCTGCGGGGGTCGCGTGTGCTGGGTGTCTaGACTCACGCGCGGGCCAGAGGTAGCCAAGAGCTGGAACTCTTG +
Preference number: 5 (lower is better)
Translates to: QLPGVSLRGSRVLGV*THARARGSQELELL
Trigger: CAAGAGTTCCAGCTCTTGGCTACCTCTGGCCCGCGCGTGAGTTCAGACACCCAGCACACGCGACCCCCGCAGGGAAACCCCGGGAAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510208.2
CDS CCA 90 bp TGCTGGGTGTCTGAACTCACGCGCGGGCCAGAGGTAGCCAAGAGCTaGAACTCTTGCCCAAGTGCCCCGGGGAAGGGAGTGAAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: CWVSELTRGPEVAKS*NSCPSAPGKGVKAR
Trigger: CCGGGCCTTCACTCCCTTCCCCGGGGCACTTGGGCAAGAGTTCCAGCTCTTGGCTACCTCTGGCCCGCGCGTGAGTTCAGACACCCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510208.2
CDS GCA 90 bp AACCCGCGTCAGTCATCATTCAGAACCTCTCCCATCCCAGCTCCCTaGAGCGCGGGTCCCGAGCTGCTCCAGATCCCCAGCACCCAGCTC +
Preference number: 5 (lower is better)
Translates to: NPRQSSFRTSPIPAP*SAGPELLQIPSTQL
Trigger: GAGCTGGGTGCTGGGGATCTGGAGCAGCTCGGGACCCGCGCTGCAGGGAGCTGGGATGGGAGAGGTTCTGAATGATGACTGACGCGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505654.1
CDS TCA 90 bp GAACTCTTGCCCAAGTGCCCCGGGGAAGGGAGTGAAGGCCCGGCCTaGAAGTCTCTGACCCTCCCGAGTCTCGTGTCCCTAGAAGCAGCC +
Preference number: 5 (lower is better)
Translates to: ELLPKCPGEGSEGPA*KSLTLPSLVSLEAA
Trigger: GGCTGCTTCTAGGGACACGAGACTCGGGAGGGTCAGAGACTTTCAGGCCGGGCCTTCACTCCCTTCCCCGGGGCACTTGGGCAAGAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508060.1
ENST00000510208.2
CDS GCA 90 bp TCAGAACCTCTCCCATCCCAGCTCCCTGCAGCGCGGGTCCCGAGCTaGTCCAGATCCCCAGCACCCAGCTCTGGTCTTTCCAGACAACTC +
Preference number: 5 (lower is better)
Translates to: SEPLPSQLPAARVPS*SRSPAPSSGLSRQL
Trigger: GAGTTGTCTGGAAAGACCAGAGCTGGGTGCTGGGGATCTGGAGCAGCTCGGGACCCGCGCTGCAGGGAGCTGGGATGGGAGAGGTTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505654.1
CDS CCA 90 bp CGTCAGTCATCATTCAGAACGCGCGGGCCAGAGGTAGCCAAGAGCTaGAACTCTTGCCCAAGTGCCCCGGGGAAGGGAGTGAAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: RQSSFRTRGPEVAKS*NSCPSAPGKGVKAR
Trigger: CCGGGCCTTCACTCCCTTCCCCGGGGCACTTGGGCAAGAGTTCCAGCTCTTGGCTACCTCTGGCCCGCGCGTTCTGAATGATGACTGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508060.1
CDS TCA 90 bp CGTGTCCCTAGAAGCAGCCTTGCGAGGTGGCCACGCCAGCTGCCCTaGGAGAAGCAGAGGAAAATGTCCGACTCTCCCTCCGCCCAGCTT +
Preference number: 5 (lower is better)
Translates to: RVPRSSLARWPRQLP*EKQRKMSDSPSAQL
Trigger: AAGCTGGGCGGAGGGAGAGTCGGACATTTTCCTCTGCTTCTCTCAGGGCAGCTGGCGTGGCCACCTCGCAAGGCTGCTTCTAGGGACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508060.1
CDS GCA 90 bp AGTCTCGTGTCCCTAGAAGCAGCCTTGCGAGGTGGCCACGCCAGCTaGCCTGAGAGAAGCAGAGGAAAATGTCCGACTCTCCCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: SLVSLEAALRGGHAS*PERSRGKCPTLPPP
Trigger: GGGCGGAGGGAGAGTCGGACATTTTCCTCTGCTTCTCTCAGGGCAGCTGGCGTGGCCACCTCGCAAGGCTGCTTCTAGGGACACGAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508060.1
CDS-3UTR CAA 90 bp TCCGAGTCCTATTTGCTGGTAAACAAACTTGCTGTCAAACGAGTTTCCATCCCAGGGCAGGCGGGACTTTaGTCCGGCCCGCAGGCGGAA +
Preference number: 5 (lower is better)
Translates to: SESYLLVNKLAVKRVSIPGQAGL*SGPQAE
Trigger: TTCCGCCTGCGGGCCGGACAAAAGTCCCGCCTGCCC...TGGGATGGAAACTCGTTTGACAGCAAGTTTGTTTACCAGCAAATAGGACTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS TCA 90 bp TGGACAGATCACAGCACTAGGGAAGGTAGGCTGGACCATGGCTGCTaGCCACACAGAGGTGATAAGGAAATCCATGGGGCTCCTGGAGTT +
Preference number: 5 (lower is better)
Translates to: WTDHSTREGRLDHGC*PHRGDKEIHGAPGV
Trigger: AACTCCAGGAGCCCCATGGATTTCCTTATCACCTCTGTGTGGTCAGCAGCCATGGTCCAGCCTACCTTCCCTAGTGCTGTGATCTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513648.5
CDS GCA 90 bp GCACAGCTCTCAGTCCAGTGGGCACCTTGTTCTAATCGACACCACTaGCTCCTGTTTAGGTGTAACCCCAGGCATGCGAATATCCAATGC +
Preference number: 5 (lower is better)
Translates to: AQLSVQWAPCSNRHH*LLFRCNPRHANIQC
Trigger: GCATTGGATATTCGCATGCCTGGGGTTACACCTAAACAGGAGGCAGTGGTGTCGATTAGAACAAGGTGCCCACTGGACTGAGAGCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682024.1
CDS CCA 90 bp CCACACAGAGGTGATAAGGAAATCCATGGGGCTCCTGGAGTTGGATaGGGATCTTCTTTAGGCACTTCCCAGCAATCGCACAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: PHRGDKEIHGAPGVG*GSSLGTSQQSHSCF
Trigger: GAAGCAGCTGTGCGATTGCTGGGAAGTGCCTAAAGAAGATCCCCATCCAACTCCAGGAGCCCCATGGATTTCCTTATCACCTCTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513648.5
CDS CCA 90 bp GCTGGCTCGAGGCTTGAAGTCAATCACGAAGGCTTCCTCATCCACTaGTATTCGCATAGACATGCAGAAGTATGTATCGGACTGCGCGAC +
Preference number: 5 (lower is better)
Translates to: AGSRLEVNHEGFLIH*YSHRHAEVCIGLRD
Trigger: GTCGCGCAGTCCGATACATACTTCTGCATGTCTATGCGAATACCAGTGGATGAGGAAGCCTTCGTGATTGACTTCAAGCCTCGAGCCAGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682882.1
CDS-3UTR CAA 90 bp CCACAGCCACATCAGTGGGTTGACAGAAGTGATTCTGGTCACTGCCTGGTTGCACCCGAGCCTGGCTCTTaGATCAGTTTCTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: PQPHQWVDRSDSGHCLVAPEPGS*ISFCFS
Trigger: AGAGAAACAGAAACTGATCAAAGAGCCAGGCTCGGG...TGCAACCAGGCAGTGACCAGAATCACTTCTGTCAACCCACTGATGTGGCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CAA 90 bp TCCGAGTCCTATTTGCTGGTAAACAAACTTGCTGTCAAACGAGTTTCCATCCCACTGAATCCAACACCTTaGGGGAGCCGGGTAGGGGGA +
Preference number: 5 (lower is better)
Translates to: SESYLLVNKLAVKRVSIPLNPTP*GSRVGG
Trigger: TCCCCCTACCCGGCTCCCCAAAGGTGTTGGATTCAG...TGGGATGGAAACTCGTTTGACAGCAAGTTTGTTTACCAGCAAATAGGACTCGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CAA 90 bp GATTTAGCAGCTTTGTCGTCATGTAGCACAAAGTTTCTCTTTACTGCCACAGGCCTGGTCACTGCCTGGTaGCATGCTCCTTCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: DLAALSSCSTKFLFTATGLVTAW*HAPSQD
Trigger: ATCCTGGGAAGGAGCATGCAACCAGGCAGTGACCAG...GCCTGTGGCAGTAAAGAGAAACTTTGTGCTACATGACGACAAAGCTGCTAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379799.7
CDS CCA 90 bp GCTGGCTCGAGGCTTGAAGTCAATCACGAAGGCTTCCTCATCCACTaGTATTCGCATAGACATGCAGAAGTATGTATCGGACTGTTTAGG +
Preference number: 5 (lower is better)
Translates to: AGSRLEVNHEGFLIH*YSHRHAEVCIGLFR
Trigger: CCTAAACAGTCCGATACATACTTCTGCATGTCTATGCGAATACCAGTGGATGAGGAAGCCTTCGTGATTGACTTCAAGCCTCGAGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000304400.12
ENST00000346918.7
ENST00000348126.7
ENST00000438793.8
ENST00000455264.7
ENST00000509636.5
ENST00000510208.2
ENST00000682407.1
ENST00000682972.1
ENST00000684529.1
CDS CCA 90 bp GCTGGCTCGAGGCTTGAAGTCAATCACGAAGGCTTCCTCATCCACTaGTATTCGCATAGACATGCAGAAGTATGTATCGGACTTTCCCAA +
Preference number: 5 (lower is better)
Translates to: AGSRLEVNHEGFLIH*YSHRHAEVCIGLSQ
Trigger: TTGGGAAAGTCCGATACATACTTCTGCATGTCTATGCGAATACCAGTGGATGAGGAAGCCTTCGTGATTGACTTCAAGCCTCGAGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506260.1
CDS CCA 90 bp TTTCTAGAGGCTGGCCACTGGAGCGACTTTTATCTTTCACATTCGTaGCAGATGTTGTTTATGGGTCGCTGCACCGTTTCCCATCAAGTC +
Preference number: 5 (lower is better)
Translates to: FLEAGHWSDFYLSHS*QMLFMGRCTVSHQV
Trigger: GACTTGATGGGAAACGGTGCAGCGACCCATAAACAACATCTGCCACGAATGTGAAAGATAAAAGTCGCTCCAGTGGCCAGCCTCTAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513648.5
CDS CCA 90 bp GCTGGCTCGAGGCTTGAAGTCAATCACGAAGGCTTCCTCATCCACTaGTATTCGCATAGACATGCAGAAGTATGTATCGGAATTCAGGGA +
Preference number: 5 (lower is better)
Translates to: AGSRLEVNHEGFLIH*YSHRHAEVCIGIQG
Trigger: TCCCTGAATTCCGATACATACTTCTGCATGTCTATGCGAATACCAGTGGATGAGGAAGCCTTCGTGATTGACTTCAAGCCTCGAGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682024.1
CDS CCA 90 bp GCTGGCTCGAGGCTTGAAGTCAATCACGAAGGCTTCCTCATCCACTaGTATTCGCATAGACATGCAGAAGTATGTATCGGACTTCCATTG +
Preference number: 5 (lower is better)
Translates to: AGSRLEVNHEGFLIH*YSHRHAEVCIGLPL
Trigger: CAATGGAAGTCCGATACATACTTCTGCATGTCTATGCGAATACCAGTGGATGAGGAAGCCTTCGTGATTGACTTCAAGCCTCGAGCCAGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684043.1
CDS-3UTR CAA 90 bp AACAGGCACTCCCGAGCCTGGCTCTTTGATCAGTTTCTGTTTCTCTTGCATCTTAGCCACATCAGTGGGTaGACAGAAGTGATTCTGGTC +
Preference number: 5 (lower is better)
Translates to: NRHSRAWLFDQFLFLLHLSHISG*TEVILV
Trigger: GACCAGAATCACTTCTGTCAACCCACTGATGTGGCT...AAGATGCAAGAGAAACAGAAACTGATCAAAGAGCCAGGCTCGGGAGTGCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CAA 90 bp AACAGGCACTCCCGAGCCTGGCTCTTTGATCAGTTTCTGTTTCTCTTGCATCTTGGCATATCAAAGTGCTaGCGCACTGGCTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: NRHSRAWLFDQFLFLLHLGISKC*RTGLKM
Trigger: CATCTTCAAGCCAGTGCGCAAGCACTTTGATATGCC...AAGATGCAAGAGAAACAGAAACTGATCAAAGAGCCAGGCTCGGGAGTGCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CAA 90 bp TCCGACCATTTTCCCGGTCTGCCACACATAATTGGCCCAAAAGAGGCACAAGAGTGTAGCCCTTACGGCTaGCAAAGAAATTACCAAGGT +
Preference number: 5 (lower is better)
Translates to: SDHFPGLPHIIGPKEAQECSPYG*QRNYQG
Trigger: ACCTTGGTAATTTCTTTGCAAGCCGTAAGGGCTACA...CTCTTGTGCCTCTTTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CAA 90 bp GGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCTTCTTCCTGGTCACTGCCTGGTaGCATGCTCCTTCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: GLEYCSIIWIYDKNSVFFLVTAW*HAPSQD
Trigger: ATCCTGGGAAGGAGCATGCAACCAGGCAGTGACCAG...GAAGAAGACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CAA 90 bp TCCGACCATTTTCCCGGTCTGCCACACATAATTGGCCCAAAAGAGGCACAAGAGCAGGCATACAGAATATaGGCTTTATCTGTACAGGTT +
Preference number: 5 (lower is better)
Translates to: SDHFPGLPHIIGPKEAQEQAYRI*ALSVQV
Trigger: AACCTGTACAGATAAAGCCAATATTCTGTATGCCTG...CTCTTGTGCCTCTTTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CAA 90 bp ATAACCAGAAGGGTTGTAATGAGAACAACAGGCACTCCCGAGCCTGGCTCTTTGCTTCTTCTTCTCGTTTaGGCTGCTGTAGTAAAGGAA +
Preference number: 5 (lower is better)
Translates to: ITRRVVMRTTGTPEPGSLLLLLV*AAVVKE
Trigger: TTCCTTTACTACAGCAGCCAAAACGAGAAGAAGAAG...CAAAGAGCCAGGCTCGGGAGTGCCTGTTGTTCTCATTACAACCCTTCTGGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS CCA 90 bp TCATCATTCAGAACCTTCCATTGCTACAGATGTCTGAAATCACACTaGAAAGCGAGCAACGAGAGAGAGGGGCTTTATTGTGGGGTGAAT +
Preference number: 5 (lower is better)
Translates to: SSFRTFHCYRCLKSH*KASNEREGLYCGVN
Trigger: ATTCACCCCACAATAAAGCCCCTCTCTCTCGTTGCTCGCTTTCCAGTGTGATTTCAGACATCTGTAGCAATGGAAGGTTCTGAATGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682407.1
CDS CCA 90 bp AAGTATGTATCGGACTTCCATTGCTACAGATGTCTGAAATCACACTaGAAAGCGAGCAACGAGAGAGAGGGGCTTTATTGTGGGGTGAAT +
Preference number: 5 (lower is better)
Translates to: KYVSDFHCYRCLKSH*KASNEREGLYCGVN
Trigger: ATTCACCCCACAATAAAGCCCCTCTCTCTCGTTGCTCGCTTTCCAGTGTGATTTCAGACATCTGTAGCAATGGAAGTCCGATACATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684043.1
CDS-3UTR CAA 90 bp GTTCTGAACATATCTGGAGCTACATTCTGGGTACAGGTCATGAAAGAAACTGCAACGGGAATTGGAATGTaGGCCTCTGGTGGTATGGTT +
Preference number: 5 (lower is better)
Translates to: VLNISGATFWVQVMKETATGIGM*ASGGMV
Trigger: AACCATACCACCAGAGGCCAACATTCCAATTCCCGT...TGCAGTTTCTTTCATGACCTGTACCCAGAATGTAGCTCCAGATATGTTCAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CAA 90 bp CCTTCACCAGTGAATACACATCTTGCAGCCAGTAGGTCACCAAAACTTACATCATCCTTGTACAGGTTCTaGGTCCCCAAAATGAGGCTT +
Preference number: 5 (lower is better)
Translates to: PSPVNTHLAASRSPKLTSSLYRF*VPKMRL
Trigger: AAGCCTCATTTTGGGGACCAAGAACCTGTACAAGGA...TGATGTAAGTTTTGGTGACCTACTGGCTGCAAGATGTGTATTCACTGGTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CAA 90 bp GATTTAGCAGCTTTGTCGTCATGTAGCACAAAGTTTCTCTTTACTGCCACAGGCTCCTTGTACAGGTTCTaGGTCCCCAAAATGAGGCTT +
Preference number: 5 (lower is better)
Translates to: DLAALSSCSTKFLFTATGSLYRF*VPKMRL
Trigger: AAGCCTCATTTTGGGGACCAAGAACCTGTACAAGGA...GCCTGTGGCAGTAAAGAGAAACTTTGTGCTACATGACGACAAAGCTGCTAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CAA 90 bp GATTTAGCAGCTTTGTCGTCATGTAGCACAAAGTTTCTCTTTACTGCCACAGGCTGGTCCGAGTCCTATTaGCTGGTAAACAAACTTGCT +
Preference number: 5 (lower is better)
Translates to: DLAALSSCSTKFLFTATGWSESY*LVNKLA
Trigger: AGCAAGTTTGTTTACCAGCAAATAGGACTCGGACCA...GCCTGTGGCAGTAAAGAGAAACTTTGTGCTACATGACGACAAAGCTGCTAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379799.7
CDS-3UTR CAA 90 bp GATTTAGCAGCTTTGTCGTCATGTAGCACAAAGTTTCTCTTTACTGCCACAGGCGAACTCGTCTCGAGTTaGTGTTCAGAATCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: DLAALSSCSTKFLFTATGELVSS*CSESAL
Trigger: CAAAGCAGATTCTGAACACAAACTCGAGACGAGTTC...GCCTGTGGCAGTAAAGAGAAACTTTGTGCTACATGACGACAAAGCTGCTAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379799.7
CDS-3UTR CAA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTCAGACTTCACGGGAATaGGAATGTTGGCCTCTGGTG +
Preference number: 5 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELQTSRE*ECWPLV
Trigger: CACCAGAGGCCAACATTCCAATTCCCGTGAAGTCTG...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CAA 90 bp GTTCTGAACATATCTGGAGCTACATTCTGGGTACAGGTCATGAAAGAAACTGCAGGTTTGTTCTCCATTTaGGTTTCAACAACTGCCTCG +
Preference number: 5 (lower is better)
Translates to: VLNISGATFWVQVMKETAGLFSI*VSTTAS
Trigger: CGAGGCAGTTGTTGAAACCAAAATGGAGAACAAACC...TGCAGTTTCTTTCATGACCTGTACCCAGAATGTAGCTCCAGATATGTTCAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS GCA 90 bp TTCCTTCATCACAAAACCAGTAACTTCCAGTGGATGAAGGCATATTaGATCCAAAAAGTAACATGTGATGGACAGTATCCATGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: FLHHKTSNFQWMKAY*IQKVTCDGQYPCWL
Trigger: GAGCCAGCATGGATACTGTCCATCACATGTTACTTTTTGGATGCAATATGCCTTCATCCACTGGAAGTTACTGGTTTTGTGATGAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000304400.12
ENST00000345721.6
ENST00000346918.7
ENST00000348126.7
ENST00000438793.8
ENST00000455264.7
ENST00000506260.1
ENST00000509636.5
ENST00000510208.2
ENST00000682024.1
ENST00000682407.1
ENST00000682882.1
ENST00000682972.1
ENST00000684043.1
ENST00000684379.1
ENST00000684529.1
CDS-3UTR CAA 90 bp TCCACTGGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCAAGCCAAACAGCTGCTaGGAAAAACAAGGAGAACTA +
Preference number: 5 (lower is better)
Translates to: STGLEYCSIIWIYDKNSVKPNSC*EKQGEL
Trigger: TAGTTCTCCTTGTTTTTCCAAGCAGCTGTTTGGCTT...GACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCCAGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CAA 90 bp CCTTCACCAGTGAATACACATCTTGCAGCCAGTAGGTCACCAAAACTTACATCAGTACCAAGACATTCATaGGAAAATGGTCTGGTAGTT +
Preference number: 5 (lower is better)
Translates to: PSPVNTHLAASRSPKLTSVPRHS*ENGLVV
Trigger: AACTACCAGACCATTTTCCAATGAATGTCTTGGTAC...TGATGTAAGTTTTGGTGACCTACTGGCTGCAAGATGTGTATTCACTGGTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CAA 90 bp TCCGAGTCCTATTTGCTGGTAAACAAACTTGCTGTCAAACGAGTTTCCATCCCAGTGGATGAAGGCATATaGCATCCAAAAAGTAACATG +
Preference number: 5 (lower is better)
Translates to: SESYLLVNKLAVKRVSIPVDEGI*HPKSNM
Trigger: CATGTTACTTTTTGGATGCAATATGCCTTCATCCAC...TGGGATGGAAACTCGTTTGACAGCAAGTTTGTTTACCAGCAAATAGGACTCGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CAA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTACGGGAATTGGAATGTaGGCCTCTGGTGGTATGGTT +
Preference number: 5 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELTGIGM*ASGGMV
Trigger: AACCATACCACCAGAGGCCAACATTCCAATTCCCGT...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CAA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACAGACTTCACGGGAATaGGAATGTTGGCCTCTGGTG +
Preference number: 5 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTEQTSRE*ECWPLV
Trigger: CACCAGAGGCCAACATTCCAATTCCCGTGAAGTCTG...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CAA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAAGCCACATCAGTGGGTaGACAGAAGTGATTCTGGTC +
Preference number: 5 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNESHISG*TEVILV
Trigger: GACCAGAATCACTTCTGTCAACCCACTGATGTGGCT...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CAA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTGGCATATCAAAGTGCTaGCGCACTGGCTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELGISKC*RTGLKM
Trigger: CATCTTCAAGCCAGTGCGCAAGCACTTTGATATGCC...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CAA 90 bp GGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCTTCTTCTCTGAGGAGGTGGGTTaGTTCTCCATTTTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: GLEYCSIIWIYDKNSVFFSEEVG*FSILVS
Trigger: TGAAACCAAAATGGAGAACAAACCCACCTCCTCAGA...GAAGAAGACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CAA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTACTGCCTCGGCTTCTTaGATTTCCTGGACCTCAATG +
Preference number: 5 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELTASAS*ISWTSM
Trigger: CATTGAGGTCCAGGAAATCAAAGAAGCCGAGGCAGT...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504691.1
CDS GCA 90 bp GCTCTTCCCAATCAAATGTATTTGACTCAAGAAGTAACCCTCATTTaGTATGTCTATTCTGCTGTACAGATTCAATTAGACGAGGGTCGG +
Preference number: 5 (lower is better)
Translates to: ALPNQMYLTQEVTLI*YVYSAVQIQLDEGR
Trigger: CCGACCCTCGTCTAATTGAATCTGTACAGCAGAATAGACATAGCAAATGAGGGTTACTTCTTGAGTCAAATACATTTGATTGGGAAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513648.5
CDS-3UTR CAA 90 bp GGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCTTCTTCACAGGGCCTTCTTTATaGTTTGGATCCAGTTTGAAC +
Preference number: 5 (lower is better)
Translates to: GLEYCSIIWIYDKNSVFFTGPSL*FGSSLN
Trigger: GTTCAAACTGGATCCAAACAATAAAGAAGGCCCTGT...GAAGAAGACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CAA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAATCCTTGTACAGGTTCTaGGTCCCCAAAATGAGGCTT +
Preference number: 5 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNESLYRF*VPKMRL
Trigger: AAGCCTCATTTTGGGGACCAAGAACCTGTACAAGGA...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CAA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAAACAACTGCCTCGGCTTaGATTTCCTGGACCTCAATG +
Preference number: 5 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTETTASA*ISWTSM
Trigger: CATTGAGGTCCAGGAAATCAAAGCCGAGGCAGTTGT...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CAA 90 bp TTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAAATCCCGAGCCTGGCTCTTaGATCAGTTTCTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LGNSSTRNRSQLNQNEVNPEPGS*ISFCFS
Trigger: AGAGAAACAGAAACTGATCAAAGAGCCAGGCTCGGG...ATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000504691.1
CDS-3UTR CAA 90 bp ACCCTTTTCGACTGTAGCCCTTACGGCTTGCAAAGAAATTACCAAGGTTTAAGCGCAATGAAAGTGCTATaGGGAAAATACTGTGTTCAA +
Preference number: 5 (lower is better)
Translates to: TLFDCSPYGLQRNYQGLSAMKVL*GKYCVQ
Trigger: TTGAACACAGTATTTTCCCAATAGCACTTTCATTGC...GCTTAAACCTTGGTAATTTCTTTGCAAGCCGTAAGGGCTACAGTCGAAAAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CAA 90 bp GATTTAGCAGCTTTGTCGTCATGTAGCACAAAGTTTCTCTTTACTGCCACAGGCGCAATGAAAGTGCTATaGGGAAAATACTGTGTTCAA +
Preference number: 5 (lower is better)
Translates to: DLAALSSCSTKFLFTATGAMKVL*GKYCVQ
Trigger: TTGAACACAGTATTTTCCCAATAGCACTTTCATTGC...GCCTGTGGCAGTAAAGAGAAACTTTGTGCTACATGACGACAAAGCTGCTAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CAA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTTGGTCCGAGTCCTATTaGCTGGTAAACAAACTTGCT +
Preference number: 5 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELWSESY*LVNKLA
Trigger: AGCAAGTTTGTTTACCAGCAAATAGGACTCGGACCA...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CAA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTTGCTTGCGCACTGGCTaGAAGATGTCTATAATTTCC +
Preference number: 5 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELCLRTG*KMSIIS
Trigger: GGAAATTATAGACATCTTCAAGCCAGTGCGCAAGCA...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CAA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAATGTAGCCCTTACGGCTaGCAAAGAAATTACCAAGGT +
Preference number: 5 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNECSPYG*QRNYQG
Trigger: ACCTTGGTAATTTCTTTGCAAGCCGTAAGGGCTACA...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CAA 90 bp GGACTGGAGTACTGCAGCATTATTTGGATCTATGACAAGAATAGTGTCTTCTTCAATCTAAATCAAAGCTaGGTTTTCAGGAGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: GLEYCSIIWIYDKNSVFFNLNQS*VFRRRK
Trigger: CTTCCTCCTCCTGAAAACCAAGCTTTGATTTAGATT...GAAGAAGACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS-3UTR CAA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTGGAGATTTAGCAGCTTaGTCGTCATGTAGCACAAAG +
Preference number: 5 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELGDLAA*SSCSTK
Trigger: CTTTGTGCTACATGACGACAAAGCTGCTAAATCTCC...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CAA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGAACTCGTCTCGAGTTaGTGTTCAGAATCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNEELVSS*CSESPK
Trigger: CTTTGGAGATTCTGAACACAAACTCGAGACGAGTTC...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS GCA 90 bp GTATACAGCTCAGTGTTTCCTTGTGAGCTATTACAGTCTATGATCTaGTTCTCCTCGACACTGATGTATCCTTATATTTTATTCTTCGAG +
Preference number: 5 (lower is better)
Translates to: VYSSVFPCELLQSMI*FSSTLMYPYILFFE
Trigger: CTCGAAGAATAAAATATAAGGATACATCAGTGTCGAGGAGAAGCAGATCATAGACTGTAATAGCTCACAAGGAAACACTGAGCTGTATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509636.5
CDS-3UTR CAA 90 bp GAACTTTTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAACAGGGCCTTCTTTATaGTTTGGATCCAGTTTGAAC +
Preference number: 5 (lower is better)
Translates to: ELLGNSSTRNRSQLNQNETGPSL*FGSSLN
Trigger: GTTCAAACTGGATCCAAACAATAAAGAAGGCCCTGT...TTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CAA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAATGCTTGCGCACTGGCTaGAAGATGTCTATAATTTCC +
Preference number: 5 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTECLRTG*KMSIIS
Trigger: GGAAATTATAGACATCTTCAAGCCAGTGCGCAAGCA...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CAA 90 bp TACTGTGTTCAAGCAAAGAATGGGGTTATTTACATCCACCAAAAAGTCTCAAAATGCTTGCGCACTGGCTaGAAGATGTCTATAATTTCC +
Preference number: 5 (lower is better)
Translates to: YCVQAKNGVIYIHQKVSKCLRTG*KMSIIS
Trigger: GGAAATTATAGACATCTTCAAGCCAGTGCGCAAGCA...TTTTGAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CAA 90 bp TTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAAATGGTTTGTTCTCCATTTaGGTTTCAACAACTGCCTCG +
Preference number: 5 (lower is better)
Translates to: LGNSSTRNRSQLNQNEVNGLFSI*VSTTAS
Trigger: CGAGGCAGTTGTTGAAACCAAAATGGAGAACAAACC...ATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000504691.1
CDS-3UTR CAA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAATCTGAGGAGGTGGGTTaGTTCTCCATTTTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTESEEVG*FSILVS
Trigger: TGAAACCAAAATGGAGAACAAACCCACCTCCTCAGA...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000504691.1
CDS-3UTR CAA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAATGTAGCCCTTACGGCTaGCAAAGAAATTACCAAGGT +
Preference number: 5 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTECSPYG*QRNYQG
Trigger: ACCTTGGTAATTTCTTTGCAAGCCGTAAGGGCTACA...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CAA 90 bp TTAGGAAACTCCTCAACTAGAAACAGAAGCCAACTTAACCAAAACGAAGTAAATGGAGATTTAGCAGCTTaGTCGTCATGTAGCACAAAG +
Preference number: 5 (lower is better)
Translates to: LGNSSTRNRSQLNQNEVNGDLAA*SSCSTK
Trigger: CTTTGTGCTACATGACGACAAAGCTGCTAAATCTCC...ATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CAA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTCTTCTTCTCGTTTaGGCTGCTGTAGTAAAGGAA +
Preference number: 5 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTELLLLV*AAVVKE
Trigger: TTCCTTTACTACAGCAGCCAAAACGAGAAGAAGAAG...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345721.6
ENST00000379799.7
CDS-3UTR CAA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTAATCTAAATCAAAGCTaGGTTTTCAGGAGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELNLNQS*VFRRRK
Trigger: CTTCCTCCTCCTGAAAACCAAGCTTTGATTTAGATT...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CAA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAATGTTCAGAATCTGCTTaGATTTCCTGGACCTCAATG +
Preference number: 5 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTECSESA*ISWTSM
Trigger: CATTGAGGTCCAGGAAATCAAAGCAGATTCTGAACA...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379799.7
CDS-3UTR CAA 90 bp AAAGTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAAAATCTAAATCAAAGCTaGGTTTTCAGGAGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: KVCTVPHRLVQFTIKYTENLNQS*VFRRRK
Trigger: CTTCCTCCTCCTGAAAACCAAGCTTTGATTTAGATT...TTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CAA 90 bp GTGTGTACAGTCCCACACAGACTAGTACAGTTTACAATTAAATACACAGAACTTGCAATGAAAGTGCTATaGGGAAAATACTGTGTTCAA +
Preference number: 5 (lower is better)
Translates to: VCTVPHRLVQFTIKYTELAMKVL*GKYCVQ
Trigger: TTGAACACAGTATTTTCCCAATAGCACTTTCATTGC...AAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345721.6
ENST00000379799.7
ENST00000504691.1
CDS-3UTR CAA 90 bp TACTGTGTTCAAGCAAAGAATGGGGTTATTTACATCCACCAAAAAGTCTCAAAAACACCAGAACAGTCCTaGTTATTATCTCTAAAAGCA +
Preference number: 5 (lower is better)
Translates to: YCVQAKNGVIYIHQKVSKTPEQS*LLSLKA
Trigger: TGCTTTTAGAGATAATAACAAGGACTGTTCTGGTGT...TTTTGAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000345721.6
CDS CAA 90 bp CGCTCGCCTCCTCCACGCCGGCGGCCTCTGCTCCGCCCTGCCTCTTaGGGCGCAGGGGGCGCGGAGCTTGGGAAGTGGAGCCCTGGCGAG +
Preference number: 6 (lower is better)
Translates to: RSPPPRRRPLLRPAS*GAGGAELGKWSPGE
Trigger: CTCGCCAGGGCTCCACTTCCCAAGCTCCGCGCCCCCTGCGCCCAAAGAGGCAGGGCGGAGCAGAGGCCGCCGGCGTGGAGGAGGCGAGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510208.2
CDS CCA 72 bp GCGGCCACACACCATCCGCCAGCGAGAGCAGCGAGCTaGCCGCGGCGAGGCGTCTCGGTCACGAGCGGCGGG +
Preference number: 6 (lower is better)
Translates to: AATHHPPARAAS*PRRGVSVTSGG
Trigger: CCCGCCGCTCGTGACCGAGACGCCTCGCCGCGGCCAGCTCGCTGCTCTCGCTGGCGGATGGTGTGTGGCCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000304400.12
ENST00000345721.6
ENST00000346918.7
ENST00000348126.7
ENST00000438793.8
ENST00000455264.7
ENST00000505654.1
ENST00000506006.1
ENST00000509523.2
ENST00000509832.5
ENST00000510208.2
ENST00000511477.5
ENST00000511839.5
ENST00000512073.1
ENST00000513648.5
ENST00000682024.1
ENST00000682407.1
ENST00000682972.1
ENST00000684379.1
ENST00000684529.1
CDS GCA 72 bp CTCGCCTCCTCCACGCCGGCGGCCTCTGCTCCGCCCTaGCTCTTTGGGCGCAGGGGGCGCGGAGCTTGGGAA +
Preference number: 6 (lower is better)
Translates to: LASSTPAASAPP*LFGRRGRGAWE
Trigger: TTCCCAAGCTCCGCGCCCCCTGCGCCCAAAGAGGCAGGGCGGAGCAGAGGCCGCCGGCGTGGAGGAGGCGAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510208.2
CDS GCA 72 bp AGCCGCTACTTCATGGCCCGGGCACGGCGGGCGTCCTaGGGCGGCCACACACCATCCGCCAGCGAGAGCAGC +
Preference number: 6 (lower is better)
Translates to: SRYFMARARRAS*GGHTPSASESS
Trigger: GCTGCTCTCGCTGGCGGATGGTGTGTGGCCGCCGCAGGACGCCCGCCGTGCCCGGGCCATGAAGTAGCGGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000304400.12
ENST00000345721.6
ENST00000346918.7
ENST00000348126.7
ENST00000438793.8
ENST00000455264.7
ENST00000505654.1
ENST00000506006.1
ENST00000509523.2
ENST00000509832.5
ENST00000510208.2
ENST00000511477.5
ENST00000511839.5
ENST00000512073.1
ENST00000513648.5
ENST00000682024.1
ENST00000682407.1
ENST00000682972.1
ENST00000684379.1
ENST00000684529.1
CDS GCA 72 bp CAGGCGGAAGCTTTCCTCCCTCCAGCGCCGCTCGCGTaGCCTGGCGCTGGGGCTAGACGCGCGGGTGCCTTA +
Preference number: 6 (lower is better)
Translates to: QAEAFLPPAPLA*PGAGARRAGAL
Trigger: TAAGGCACCCGCGCGTCTAGCCCCAGCGCCAGGGCACGCGAGCGGCGCTGGAGGGAGGAAAGCTTCCGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000304400.12
ENST00000345721.6
ENST00000346918.7
ENST00000348126.7
ENST00000438793.8
ENST00000455264.7
ENST00000505654.1
ENST00000506006.1
ENST00000509523.2
ENST00000509832.5
ENST00000510208.2
ENST00000511477.5
ENST00000511839.5
ENST00000512073.1
ENST00000513648.5
ENST00000682024.1
ENST00000682407.1
ENST00000682972.1
ENST00000684379.1
ENST00000684529.1
CDS CCA 72 bp GCCTCTTTGGGCGCAGGGGGCGCGGAGCTTGGGAAGTaGAGCCCTGGCGAGTCCCCAGCGATTGCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: ASLGAGGAELGK*SPGESPAIARS
Trigger: GCTGCGCGCAATCGCTGGGGACTCGCCAGGGCTCCACTTCCCAAGCTCCGCGCCCCCTGCGCCCAAAGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510208.2
CDS CCA 72 bp CCGCCCTGCCTCTTTGGGCGCAGGGGGCGCGGAGCTTaGGAAGTGGAGCCCTGGCGAGTCCCCAGCGATTGC +
Preference number: 6 (lower is better)
Translates to: PPCLFGRRGRGA*EVEPWRVPSDC
Trigger: GCAATCGCTGGGGACTCGCCAGGGCTCCACTTCCCAAGCTCCGCGCCCCCTGCGCCCAAAGAGGCAGGGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510208.2
CDS GCA 72 bp CGCAGCTTCCCGGGGTTTCCCTGCGGGGGTCGCGTGTaGTGGGTGTCTGAACTCACGCGCGGGCCAGAGGTA +
Preference number: 6 (lower is better)
Translates to: RSFPGFPCGGRV*WVSELTRGPEV
Trigger: TACCTCTGGCCCGCGCGTGAGTTCAGACACCCAGCACACGCGACCCCCGCAGGGAAACCCCGGGAAGCTGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510208.2
CDS CCA 72 bp AGCTTCCCGGGGTTTCCCTGCGGGGGTCGCGTGTGCTaGGTGTCTGAACTCACGCGCGGGCCAGAGGTAGCC +
Preference number: 6 (lower is better)
Translates to: SFPGFPCGGRVC*VSELTRGPEVA
Trigger: GGCTACCTCTGGCCCGCGCGTGAGTTCAGACACCCAGCACACGCGACCCCCGCAGGGAAACCCCGGGAAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510208.2
CDS TCA 72 bp GGGGTTTCCCTGCGGGGGTCGCGTGTGCTGGGTGTCTaGACTCACGCGCGGGCCAGAGGTAGCCAAGAGCTG +
Preference number: 6 (lower is better)
Translates to: GVSLRGSRVLGV*THARARGSQEL
Trigger: CAGCTCTTGGCTACCTCTGGCCCGCGCGTGAGTTCAGACACCCAGCACACGCGACCCCCGCAGGGAAACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510208.2
CDS GCA 72 bp CTCCCATCCCAGCTCCCTGCAGCGCGGGTCCCGAGCTaGTCCAGATCCCCAGCACCCAGCTCTGGTCTTTCC +
Preference number: 6 (lower is better)
Translates to: LPSQLPAARVPS*SRSPAPSSGLS
Trigger: GGAAAGACCAGAGCTGGGTGCTGGGGATCTGGAGCAGCTCGGGACCCGCGCTGCAGGGAGCTGGGATGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505654.1
CDS GCA 72 bp ACGCGCGGGCCAGAGGTAGCCAAGAGCTGGAACTCTTaGCCAAGTGCCCCGGGGAAGGGAGTGAAGGCCCGG +
Preference number: 6 (lower is better)
Translates to: TRGPEVAKSWNS*PSAPGKGVKAR
Trigger: CCGGGCCTTCACTCCCTTCCCCGGGGCACTTGGGCAAGAGTTCCAGCTCTTGGCTACCTCTGGCCCGCGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508060.1
ENST00000510208.2
CDS CAA 72 bp CTGACCCTCCCGAGTCTCGTGTCCCTAGAAGCAGCCTaGCGAGGTGGCCACGCCAGCTGCCCTGAGAGAAGC +
Preference number: 6 (lower is better)
Translates to: LTLPSLVSLEAA*RGGHASCPERS
Trigger: GCTTCTCTCAGGGCAGCTGGCGTGGCCACCTCGCAAGGCTGCTTCTAGGGACACGAGACTCGGGAGGGTCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508060.1
ENST00000510208.2
CDS GCA 72 bp CAGTCATCATTCAGAACCTCTCCCATCCCAGCTCCCTaGAGCGCGGGTCCCGAGCTGCTCCAGATCCCCAGC +
Preference number: 6 (lower is better)
Translates to: QSSFRTSPIPAP*SAGPELLQIPS
Trigger: GCTGGGGATCTGGAGCAGCTCGGGACCCGCGCTGCAGGGAGCTGGGATGGGAGAGGTTCTGAATGATGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505654.1
CDS CCA 72 bp TCTGAACTCACGCGCGGGCCAGAGGTAGCCAAGAGCTaGAACTCTTGCCCAAGTGCCCCGGGGAAGGGAGTG +
Preference number: 6 (lower is better)
Translates to: SELTRGPEVAKS*NSCPSAPGKGV
Trigger: CACTCCCTTCCCCGGGGCACTTGGGCAAGAGTTCCAGCTCTTGGCTACCTCTGGCCCGCGCGTGAGTTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510208.2
CDS CCA 72 bp TCATTCAGAACGCGCGGGCCAGAGGTAGCCAAGAGCTaGAACTCTTGCCCAAGTGCCCCGGGGAAGGGAGTG +
Preference number: 6 (lower is better)
Translates to: SFRTRGPEVAKS*NSCPSAPGKGV
Trigger: CACTCCCTTCCCCGGGGCACTTGGGCAAGAGTTCCAGCTCTTGGCTACCTCTGGCCCGCGCGTTCTGAATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508060.1
CDS TCA 72 bp AGAAGCAGCCTTGCGAGGTGGCCACGCCAGCTGCCCTaGGAGAAGCAGAGGAAAATGTCCGACTCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: RSSLARWPRQLP*EKQRKMSDSPS
Trigger: GGAGGGAGAGTCGGACATTTTCCTCTGCTTCTCTCAGGGCAGCTGGCGTGGCCACCTCGCAAGGCTGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508060.1
CDS GCA 72 bp TCCCTAGAAGCAGCCTTGCGAGGTGGCCACGCCAGCTaGCCTGAGAGAAGCAGAGGAAAATGTCCGACTCTC +
Preference number: 6 (lower is better)
Translates to: SLEAALRGGHAS*PERSRGKCPTL
Trigger: GAGAGTCGGACATTTTCCTCTGCTTCTCTCAGGGCAGCTGGCGTGGCCACCTCGCAAGGCTGCTTCTAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508060.1
CDS CCA 72 bp CTTAAAAGAAACCCTACACGCACCTCCTGTGTGTTCTaGTTCCCAGGTGCCTTCACCAGGTGGGGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LKRNPTRTSCVF*FPGAFTRWGLL
Trigger: CAGCAGCCCCCACCTGGTGAAGGCACCTGGGAACCAGAACACACAGGAGGTGCGTGTAGGGTTTCTTTTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505372.1
CDS TCA 72 bp CACAGCACTAGGGAAGGTAGGCTGGACCATGGCTGCTaGCCACACAGAGGTGATAAGGAAATCCATGGGGCT +
Preference number: 6 (lower is better)
Translates to: HSTREGRLDHGC*PHRGDKEIHGA
Trigger: AGCCCCATGGATTTCCTTATCACCTCTGTGTGGTCAGCAGCCATGGTCCAGCCTACCTTCCCTAGTGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513648.5
CDS GCA 72 bp TCAGTCCAGTGGGCACCTTGTTCTAATCGACACCACTaGCTCCTGTTTAGGTGTAACCCCAGGCATGCGAAT +
Preference number: 6 (lower is better)
Translates to: SVQWAPCSNRHH*LLFRCNPRHAN
Trigger: ATTCGCATGCCTGGGGTTACACCTAAACAGGAGGCAGTGGTGTCGATTAGAACAAGGTGCCCACTGGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682024.1
CDS CCA 72 bp GGTGATAAGGAAATCCATGGGGCTCCTGGAGTTGGATaGGGATCTTCTTTAGGCACTTCCCAGCAATCGCAC +
Preference number: 6 (lower is better)
Translates to: GDKEIHGAPGVG*GSSLGTSQQSH
Trigger: GTGCGATTGCTGGGAAGTGCCTAAAGAAGATCCCCATCCAACTCCAGGAGCCCCATGGATTTCCTTATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513648.5
CDS CCA 72 bp GCTGGCCACTGGAGCGACTTTTATCTTTCACATTCGTaGCAGATGTTGTTTATGGGTCGCTGCACCGTTTCC +
Preference number: 6 (lower is better)
Translates to: AGHWSDFYLSHS*QMLFMGRCTVS
Trigger: GGAAACGGTGCAGCGACCCATAAACAACATCTGCCACGAATGTGAAAGATAAAAGTCGCTCCAGTGGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513648.5
CDS GCA 72 bp GGATCTTCTTTAGGCACTTCCCAGCAATCGCACAGCTaGTTCGCGAAGAGCTTGGATCCATTTTCTCAAAAA +
Preference number: 6 (lower is better)
Translates to: GSSLGTSQQSHS*FAKSLDPFSQK
Trigger: TTTTTGAGAAAATGGATCCAAGCTCTTCGCGAAGCAGCTGTGCGATTGCTGGGAAGTGCCTAAAGAAGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513648.5
CDS CCA 72 bp TCGGACTTCCATTGCTACAGATGTCTGAAATCACACTaGAAAGCGAGCAACGAGAGAGAGGGGCTTTATTGT +
Preference number: 6 (lower is better)
Translates to: SDFHCYRCLKSH*KASNEREGLYC
Trigger: ACAATAAAGCCCCTCTCTCTCGTTGCTCGCTTTCCAGTGTGATTTCAGACATCTGTAGCAATGGAAGTCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684043.1
CDS CAA 90 bp TCTTGCATCTTCTGCAATTCTGAGGAGGTGGGTTTGTTCTCCATTTaGGTTTCAACAACTGCCTCGGCTTCTTTGATTTCCTGGACCTCA +
Preference number: 6 (lower is better)
Translates to: SCIFCNSEEVGLFSI*VSTTASASLISWTS
Trigger: TGAGGTCCAGGAAATCAAAGAAGCCGAGGCAGTTGTTGAAACCAAAATGGAGAACAAACCCACCTCCTCAGAATTGCAGAAGATGCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000348126.7
ENST00000438793.8
ENST00000504691.1
ENST00000682407.1
ENST00000682972.1
ENST00000684043.1
ENST00000684529.1
CDS TCA 72 bp GTGGATGAAGGCATATTGCATCCAAAAAGTAACATGTaGTGGACAGTATCCATGCTGGCTCGAGGCTTGAAG +
Preference number: 6 (lower is better)
Translates to: VDEGILHPKSNM*WTVSMLARGLK
Trigger: CTTCAAGCCTCGAGCCAGCATGGATACTGTCCATCACATGTTACTTTTTGGATGCAATATGCCTTCATCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000304400.12
ENST00000345721.6
ENST00000346918.7
ENST00000348126.7
ENST00000438793.8
ENST00000455264.7
ENST00000506260.1
ENST00000509636.5
ENST00000510208.2
ENST00000682024.1
ENST00000682407.1
ENST00000682882.1
ENST00000682972.1
ENST00000684043.1
ENST00000684379.1
ENST00000684529.1
CDS TCA 72 bp ACTTCCCTTTCCTCTAAATCTTCCCAGTACTCTTCCTaGACTCGTCTCGAGTTTGTGTTCAGAATCTGCTCC +
Preference number: 6 (lower is better)
Translates to: TSLSSKSSQYSS*TRLEFVFRICS
Trigger: GGAGCAGATTCTGAACACAAACTCGAGACGAGTTCAGGAAGAGTACTGGGAAGATTTAGAGGAAAGGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304400.12
ENST00000504456.1
ENST00000682972.1
ENST00000684529.1
CDS TCA 72 bp AGTCATCATTCAGAACCTTCCATTGCTACAGATGTCTaGAATCACACTGGAAAGCGAGCAACGAGAGAGAGG +
Preference number: 6 (lower is better)
Translates to: SHHSEPSIATDV*NHTGKRATRER
Trigger: CCTCTCTCTCGTTGCTCGCTTTCCAGTGTGATTTCAGACATCTGTAGCAATGGAAGGTTCTGAATGATGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682407.1
CDS TCA 72 bp AGAAGTATGTATCGGACTTCCATTGCTACAGATGTCTaGAATCACACTGGAAAGCGAGCAACGAGAGAGAGG +
Preference number: 6 (lower is better)
Translates to: RSMYRTSIATDV*NHTGKRATRER
Trigger: CCTCTCTCTCGTTGCTCGCTTTCCAGTGTGATTTCAGACATCTGTAGCAATGGAAGTCCGATACATACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684043.1
CDS GCA 72 bp GACTCAAGAAGTAACCCTCATTTGCTATGTCTATTCTaGTGTACAGATTCAATTAGACGAGGGTCGGGCCTG +
Preference number: 6 (lower is better)
Translates to: DSRSNPHLLCLF*CTDSIRRGSGL
Trigger: CAGGCCCGACCCTCGTCTAATTGAATCTGTACAGCAGAATAGACATAGCAAATGAGGGTTACTTCTTGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513648.5
CDS CCA 72 bp AGAACCTTCCATTGCTACAGATGTCTGAAATCACACTaGAAAGCGAGCAACGAGAGAGAGGGGCTTTATTGT +
Preference number: 6 (lower is better)
Translates to: RTFHCYRCLKSH*KASNEREGLYC
Trigger: ACAATAAAGCCCCTCTCTCTCGTTGCTCGCTTTCCAGTGTGATTTCAGACATCTGTAGCAATGGAAGGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682407.1
CDS CAA 72 bp GTAGGGGGAGCATTTCTCGCCCAGGCATACAGAATATaGGCTTTATCTGTACAGGTTCCTTCATCACAAAAC +
Preference number: 6 (lower is better)
Translates to: VGGAFLAQAYRI*ALSVQVPSSQN
Trigger: GTTTTGTGATGAAGGAACCTGTACAGATAAAGCCAATATTCTGTATGCCTGGGCGAGAAATGCTCCCCCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000304400.12
ENST00000345721.6
ENST00000346918.7
ENST00000348126.7
ENST00000438793.8
ENST00000455264.7
ENST00000506260.1
ENST00000509636.5
ENST00000510208.2
ENST00000682024.1
ENST00000682407.1
ENST00000682882.1
ENST00000682972.1
ENST00000684043.1
ENST00000684379.1
ENST00000684529.1
CDS CAA 72 bp AACCCCTGTATGCATACTGACATCATCAGGAGAGACTaGGAGGCAGAGGATACTATGGTAACCAAGCAATGT +
Preference number: 6 (lower is better)
Translates to: NPCMHTDIIRRD*EAEDTMVTKQC
Trigger: ACATTGCTTGGTTACCATAGTATCCTCTGCCTCCAAGTCTCTCCTGATGATGTCAGTATGCATACAGGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684043.1
CDS TCA 72 bp TTTGATTTCCTGGACCTCAATGCCAGCCTTTTTAACTaGTCGATGTTCCAATTCTTGCGCACTGGCTTGAAG +
Preference number: 6 (lower is better)
Translates to: FDFLDLNASLFN*SMFQFLRTGLK
Trigger: CTTCAAGCCAGTGCGCAAGAATTGGAACATCGATCAGTTAAAAAGGCTGGCATTGAGGTCCAGGAAATCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510006.6
CDS CCA 72 bp ACTTTTATCTTTCACATTCGTGGCAGATGTTGTTTATaGGTCGCTGCACCGTTTCCCATCAAGTCCCAATGT +
Preference number: 6 (lower is better)
Translates to: TFIFHIRGRCCL*VAAPFPIKSQC
Trigger: ACATTGGGACTTGATGGGAAACGGTGCAGCGACCCATAAACAACATCTGCCACGAATGTGAAAGATAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513648.5
CDS CAA 72 bp AATCTTCCCAGTACTCTTCCTGAACTCGTCTCGAGTTaGTGTTCAGAATCTGCTCCAAAGGCCCTTGATTTT +
Preference number: 6 (lower is better)
Translates to: NLPSTLPELVSS*CSESAPKALDF
Trigger: AAAATCAAGGGCCTTTGGAGCAGATTCTGAACACAAACTCGAGACGAGTTCAGGAAGAGTACTGGGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304400.12
ENST00000504456.1
ENST00000682972.1
ENST00000684529.1
CDS CAA 72 bp TTCTGCAATTCTGAGGAGGTGGGTTTGTTCTCCATTTaGGTTTCAACAACTGCCTCGGCTTCTTTGATTTCC +
Preference number: 6 (lower is better)
Translates to: FCNSEEVGLFSI*VSTTASASLIS
Trigger: GGAAATCAAAGAAGCCGAGGCAGTTGTTGAAACCAAAATGGAGAACAAACCCACCTCCTCAGAATTGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000348126.7
ENST00000438793.8
ENST00000504691.1
ENST00000682407.1
ENST00000682972.1
ENST00000684043.1
ENST00000684529.1
CDS CAA 72 bp AATCTTCCCAGTACTCTTCCTGAACTCGTCTCGAGTTaGTGTTCAGAATCTGCTTTGATTTCCTGGACCTCA +
Preference number: 6 (lower is better)
Translates to: NLPSTLPELVSS*CSESALISWTS
Trigger: TGAGGTCCAGGAAATCAAAGCAGATTCTGAACACAAACTCGAGACGAGTTCAGGAAGAGTACTGGGAAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379799.7
ENST00000682024.1
ENST00000682882.1
CDS TCA 72 bp ACTTCCCTTTCCTCTAAATCTTCCCAGTACTCTTCCTaGACTCGTCTCGAGTTTGTGTTCAGAATCTGCTTT +
Preference number: 6 (lower is better)
Translates to: TSLSSKSSQYSS*TRLEFVFRICF
Trigger: AAAGCAGATTCTGAACACAAACTCGAGACGAGTTCAGGAAGAGTACTGGGAAGATTTAGAGGAAAGGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379799.7
ENST00000682024.1
ENST00000682882.1
CDS TCA 72 bp ACTTCCCTTTCCTCTAAATCTTCCCAGTACTCTTCCTaGACTCGTCTCGAGTTTGTGTTCAGAATCTTTGAT +
Preference number: 6 (lower is better)
Translates to: TSLSSKSSQYSS*TRLEFVFRIFD
Trigger: ATCAAAGATTCTGAACACAAACTCGAGACGAGTTCAGGAAGAGTACTGGGAAGATTTAGAGGAAAGGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455264.7
ENST00000510006.6
ENST00000510208.2
ENST00000684379.1
CDS CAA 90 bp AGCTCTTCCCAATCAAATGTATTTGACTCAAGAAGTAACCCTCATTaGCTATGTCTATTCTGCTGTACAGATTCAATTAGACGAGGGTCG +
Preference number: 6 (lower is better)
Translates to: SSSQSNVFDSRSNPH*LCLFCCTDSIRRGS
Trigger: CGACCCTCGTCTAATTGAATCTGTACAGCAGAATAGACATAGCAAATGAGGGTTACTTCTTGAGTCAAATACATTTGATTGGGAAGAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513648.5
CDS CAA 90 bp GATGAATCAATAGGAACTACGGGTCTGGTGGTACCAAGACATTCATaGGAAAATGGTCTGGTAGTTTCTTTAAACCTCTTAAAGACAGAA +
Preference number: 6 (lower is better)
Translates to: DESIGTTGLVVPRHS*ENGLVVSLNLLKTE
Trigger: TTCTGTCTTTAAGAGGTTTAAAGAAACTACCAGACCATTTTCCAATGAATGTCTTGGTACCACCAGACCCGTAGTTCCTATTGATTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000304400.12
ENST00000345721.6
ENST00000346918.7
ENST00000348126.7
ENST00000438793.8
ENST00000455264.7
ENST00000509523.2
ENST00000510208.2
ENST00000511839.5
ENST00000513648.5
ENST00000682024.1
ENST00000682407.1
ENST00000682972.1
ENST00000684379.1
ENST00000684529.1
CDS CAA 72 bp AACACTTTCCAGGCAGCTCTTCCCAATCAAATGTATTaGACTCAAGAAGTAACCCTCATTTGCTATGTCTAT +
Preference number: 6 (lower is better)
Translates to: NTFQAALPNQMY*TQEVTLICYVY
Trigger: ATAGACATAGCAAATGAGGGTTACTTCTTGAGTCAAATACATTTGATTGGGAAGAGCTGCCTGGAAAGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513648.5
CDS GCA 72 bp TCAGTGTTTCCTTGTGAGCTATTACAGTCTATGATCTaGTTCTCCTCGACACTGATGTATCCTTATATTTTA +
Preference number: 6 (lower is better)
Translates to: SVFPCELLQSMI*FSSTLMYPYIL
Trigger: TAAAATATAAGGATACATCAGTGTCGAGGAGAAGCAGATCATAGACTGTAATAGCTCACAAGGAAACACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509636.5
CDS CAA 90 bp ATAATTCTTAACACTTTCCAGGCAGCTCTTCCCAATCAAATGTATTaGACTCAAGAAGTAACCCTCATTTGCTATGTCTATTCTGCTGTA +
Preference number: 6 (lower is better)
Translates to: IILNTFQAALPNQMY*TQEVTLICYVYSAV
Trigger: TACAGCAGAATAGACATAGCAAATGAGGGTTACTTCTTGAGTCAAATACATTTGATTGGGAAGAGCTGCCTGGAAAGTGTTAAGAATTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513648.5
CDS GCA 72 bp TCCTGGTCTAACACTTCTTCTTCTTCTCGTTTTGGCTaGTGTAGTAAAGGAATCTTATCTTTATATTCTGTT +
Preference number: 6 (lower is better)
Translates to: SWSNTSSSSRFG*CSKGILSLYSV
Trigger: AACAGAATATAAAGATAAGATTCCTTTACTACAGCAGCCAAAACGAGAAGAAGAAGAAGTGTTAGACCAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348126.7
ENST00000510208.2
ENST00000682972.1