RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PALM (Homo sapiens)

Ensembl gene IDs: ENSG00000099864

Ensembl transcript IDs: ENST00000264560.11, ENST00000338448.10, ENST00000586055.2, ENST00000586776.1, ENST00000587513.3, ENST00000589012.5, ENST00000590161.2, ENST00000592155.5, ENST00000592870.5, ENST00000593172.5, ENST00000633534.1

Found 502 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGAGGAAGGAGGGCCCAGTGGGGGCGGGAGCTCGGGACAAGGAGTaGCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAATGACC +
Preference number: 1 (lower is better)
Translates to: RRKEGPVGAGARDKE*LTRSLPCAGGRSMT
Trigger: GGTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCCACTGGGCCCTCCTTCCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR CCA 90 bp CCCTCCACTGCCCGGACGTGCTCCAAGCCCAGTAGAGCTGGCAGGTaGGGCCTGATCTCGGGGTATGGTTGGGAAGACCCAGGACCCTGG +
Preference number: 1 (lower is better)
Translates to: PSTARTCSKPSRAGR*GLISGYGWEDPGPW
Trigger: CCAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGGCCCCACCTGCCAGCTCTACTGGGCTTGGAGCACGTCCGGGCAGTGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR TCA 90 bp CTGCCCGGACGTGCTCCAAGCCCAGTAGAGCTGGCAGGTGGGGCCTaGTCTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGTCCAAGC +
Preference number: 1 (lower is better)
Translates to: LPGRAPSPVELAGGA*SRGMVGKTQDPGPS
Trigger: GCTTGGACCAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGGCCCCACCTGCCAGCTCTACTGGGCTTGGAGCACGTCCGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR CCA 90 bp GGTGGTGACTGGACCAGGAGGTGGCCTGAGCACTGGGCACCAGGCTaGAGGTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAA +
Preference number: 1 (lower is better)
Translates to: GGDWTRRWPEHWAPG*RSLGQGPSWGLVVQ
Trigger: TTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGACCTCCAGCCTGGTGCCCAGTGCTCAGGCCACCTCCTGGTCCAGTCACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR CCA 90 bp ACTTCCAATGAGAGGGGGCTGGGGGCAGGCTCACATTGGTCTGGGTaGCAAATGAGGGTCTCCTGCTCCAACCCAAGAGGCTTCCTGTCC +
Preference number: 1 (lower is better)
Translates to: TSNERGLGAGSHWSG*QMRVSCSNPRGFLS
Trigger: GGACAGGAAGCCTCTTGGGTTGGAGCAGGAGACCCTCATTTGCCACCCAGACCAATGTGAGCCTGCCCCCAGCCCCCTCTCATTGGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR GCA 90 bp CCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTCTGTGAGAATGTaGACGAATGTGCCTCTGGGGACGAGTGTAGCTGCCCCCAGGAGG +
Preference number: 1 (lower is better)
Translates to: PGCPKPTCETVSVRM*TNVPLGTSVAAPRR
Trigger: CCTCCTGGGGGCAGCTACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACACGTTGGCTTTGGACAACCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GGCAGGGACCCAGGCTCCCATCCGAGGTGGCCCCTGTACCTGCCCTGCCGAGGCCAGAGGGTGGCAGGCTaGCCTGGGCCGCGTGGAGGC +
Preference number: 2 (lower is better)
Translates to: GRDPGSHPRWPLYLPCRGQRVAG*PGPRGG
Trigger: GCCTCCACGCGGCCCAGGCCAGCCTGCCACCCTCTG...GCCTCGGCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCCTGGGTCCCTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GGCAGGGACCCAGGCTCCCATCCGAGGTGGCCCCTGTACCTGCCCTGCCGAGGCGCTGGTGGGTGTCTGTaGTGTGGGGTGGGGGCCGGG +
Preference number: 2 (lower is better)
Translates to: GRDPGSHPRWPLYLPCRGAGGCL*CGVGAG
Trigger: CCCGGCCCCCACCCCACACCACAGACACCCACCAGC...GCCTCGGCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCCTGGGTCCCTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGCGGGAGGGGCCGGGCTaGTGGGTGTCTGTGGTGTGG +
Preference number: 2 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRREGPG*WVSVVW
Trigger: CCACACCACAGACACCCACCAGCCCGGCCCCTCCCG...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR GCA 90 bp GGCAGGGACCCAGGCTCCCATCCGAGGTGGCCCCTGTACCTGCCCTGCCGAGGCTCGGTCCCTGCCCTGTaGAGGGGGCAGGTCAATGAC +
Preference number: 2 (lower is better)
Translates to: GRDPGSHPRWPLYLPCRGSVPAL*RGQVND
Trigger: GTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGA...GCCTCGGCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCCTGGGTCCCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAATGACCCCTGGTTCGCCGGACCCGTGAGGCTGTaGGTGGAGGGTGGGCAGGCG +
Preference number: 2 (lower is better)
Translates to: AHSVPALCRGQVNDPWFAGPVRL*VEGGQA
Trigger: CGCCTGCCCACCCTCCACCCACAGCCTCACGGGTCC...GGCGAACCAGGGGTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GGGCACTTCAGCGAAGGCTCGCGGCTCGAGGGACTCAGGCAGACTCCAGGGAGGGGAAGGAGGGCCCAGTaGGGGCGGGAGCTCGGGACA +
Preference number: 2 (lower is better)
Translates to: GHFSEGSRLEGLRQTPGRGRRAQ*GRELGT
Trigger: TGTCCCGAGCTCCCGCCCCCACTGGGCCCTCCTTCC...CCTCCCTGGAGTCTGCCTGAGTCCCTCGAGCCGCGAGCCTTCGCTGAAGTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR TCA 90 bp GGCAGGGACCCAGGCTCCCATCCGAGGTGGCCCCTGTACCTGCCCTGCCGAGGCGGTCTGGGTGGCAAATaGGGGTCTCCTGCTCCAACC +
Preference number: 2 (lower is better)
Translates to: GRDPGSHPRWPLYLPCRGGLGGK*GSPAPT
Trigger: GGTTGGAGCAGGAGACCCTCATTTGCCACCCAGACC...GCCTCGGCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCCTGGGTCCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GCTGGCAGGTGGGGCCTGATCTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGGGACCCGTGAGGCTGTaGGTGGAGGGTGGGCAGGCG +
Preference number: 2 (lower is better)
Translates to: AGRWGLISGYGWEDPGPWGPVRL*VEGGQA
Trigger: CGCCTGCCCACCCTCCACCCACAGCCTCACGGGTCC...CCAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGGCCCCACCTGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GGGCACTTCAGCGAAGGCTCGCGGCTCGAGGGACTCAGGCAGACTCCAGGGAGGGGGCGTGGTGACGGGTaGGGGCCCCTGTCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: GHFSEGSRLEGLRQTPGRGRGDG*GPLSLF
Trigger: AAAGAGGGACAGGGGCCCCCACCCGTCACCACGCCC...CCTCCCTGGAGTCTGCCTGAGTCCCTCGAGCCGCGAGCCTTCGCTGAAGTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAGGGCGTGGTGACGGGTaGGGGCCCCTGTCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: ARDKEWLTRSLPCAGGRSGRGDG*GPLSLF
Trigger: AAAGAGGGACAGGGGCCCCCACCCGTCACCACGCCC...TGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GCTGGCAGGTGGGGCCTGATCTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGGGAAGGAGGGCCCAGTaGGGGCGGGAGCTCGGGACA +
Preference number: 2 (lower is better)
Translates to: AGRWGLISGYGWEDPGPWGRRAQ*GRELGT
Trigger: TGTCCCGAGCTCCCGCCCCCACTGGGCCCTCCTTCC...CCAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGGCCCCACCTGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR TCA 90 bp GGGCACTTCAGCGAAGGCTCGCGGCTCGAGGGACTCAGGCAGACTCCAGGGAGGCCTTGCCACTTCCAATaGGAGGGGGCTGGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: GHFSEGSRLEGLRQTPGRPCHFQ*EGAGGR
Trigger: CCTGCCCCCAGCCCCCTCTCATTGGAAGTGGCAAGG...CCTCCCTGGAGTCTGCCTGAGTCCCTCGAGCCGCGAGCCTTCGCTGAAGTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GGGCACTTCAGCGAAGGCTCGCGGCTCGAGGGACTCAGGCAGACTCCAGGGAGGCTGGTCCAAGCAGGATaGAGAAGAGGCCGGGGGCGG +
Preference number: 2 (lower is better)
Translates to: GHFSEGSRLEGLRQTPGRLVQAG*RRGRGR
Trigger: CCGCCCCCGGCCTCTTCTCCATCCTGCTTGGACCAG...CCTCCCTGGAGTCTGCCTGAGTCCCTCGAGCCGCGAGCCTTCGCTGAAGTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR GCA 90 bp GCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCACCTACCAGGCACAAGTaGACGGCTCTGGTTCGGGGG +
Preference number: 2 (lower is better)
Translates to: ARDKEWLTRSLPCAGGRSPTRHK*TALVRG
Trigger: CCCCCGAACCAGAGCCGTGCACTTGTGCCTGGTAGG...TGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GGCAGGGACCCAGGCTCCCATCCGAGGTGGCCCCTGTACCTGCCCTGCCGAGGCGAAGACCCAGGACCCTaGTCCAAGCAGGATGGAGAA +
Preference number: 2 (lower is better)
Translates to: GRDPGSHPRWPLYLPCRGEDPGP*SKQDGE
Trigger: TTCTCCATCCTGCTTGGACCAGGGTCCTGGGTCTTC...GCCTCGGCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCCTGGGTCCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR TCA 90 bp GGGCACTTCAGCGAAGGCTCGCGGCTCGAGGGACTCAGGCAGACTCCAGGGAGGGGTCTGGGTGGCAAATaGGGGTCTCCTGCTCCAACC +
Preference number: 2 (lower is better)
Translates to: GHFSEGSRLEGLRQTPGRGLGGK*GSPAPT
Trigger: GGTTGGAGCAGGAGACCCTCATTTGCCACCCAGACC...CCTCCCTGGAGTCTGCCTGAGTCCCTCGAGCCGCGAGCCTTCGCTGAAGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTCGGGAGGGGCCGGGCTaGTGGGTGTCTGTGGTGTGG +
Preference number: 2 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCREGPG*WVSVVW
Trigger: CCACACCACAGACACCCACCAGCCCGGCCCCTCCCG...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGCGGGAGGGGCCGGGCTaGTGGGTGTCTGTGGTGTGG +
Preference number: 2 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCEREGPG*WVSVVW
Trigger: CCACACCACAGACACCCACCAGCCCGGCCCCTCCCG...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAATGACCCCTGGTTCGCCCAACACGCCAAGTCCTaGACCCGTGAGGCTGTGGGT +
Preference number: 2 (lower is better)
Translates to: AHSVPALCRGQVNDPWFAQHAKS*TREAVG
Trigger: ACCCACAGCCTCACGGGTCCAGGACTTGGCGTGTTG...GGCGAACCAGGGGTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCACAACACGCCAAGTCCTaGACCCGTGAGGCTGTGGGT +
Preference number: 2 (lower is better)
Translates to: ARDKEWLTRSLPCAGGRSQHAKS*TREAVG
Trigger: ACCCACAGCCTCACGGGTCCAGGACTTGGCGTGTTG...TGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GGGCACTTCAGCGAAGGCTCGCGGCTCGAGGGACTCAGGCAGACTCCAGGGAGGGAAGCTGCCGTGACATaGGGGGTCCTTGTCTCGGGA +
Preference number: 2 (lower is better)
Translates to: GHFSEGSRLEGLRQTPGREAAVT*GVLVSG
Trigger: TCCCGAGACAAGGACCCCCCATGTCACGGCAGCTTC...CCTCCCTGGAGTCTGCCTGAGTCCCTCGAGCCGCGAGCCTTCGCTGAAGTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR GCA 90 bp CTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGGGCTCACTCGGTCCCTaGCCTGTGCAGGGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: LGQGPSWGLVVQSQRVRRGSLGP*PVQGAG
Trigger: ACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCC...CCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR GCA 90 bp CTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGGGGGACGAGTGTAGCTaGCCCCAGGAGGGAAGCCCC +
Preference number: 2 (lower is better)
Translates to: LGQGPSWGLVVQSQRVRRGDECS*PQEGSP
Trigger: GGGGCTTCCCTCCTGGGGGCAGCTACACTCGTCCCC...CCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGTGGGTGTCTGTGGTGTaGGGTGGGGGCCGGGGTCTC +
Preference number: 2 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCEWVSVV*GGGRGL
Trigger: GAGACCCCGGCCCCCACCCCACACCACAGACACCCA...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTTGGGTGTCTGTGGTGTaGGGTGGGGGCCGGGGTCTC +
Preference number: 2 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCWVSVV*GGGRGL
Trigger: GAGACCCCGGCCCCCACCCCACACCACAGACACCCA...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp CTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGTCCAAGCAGGATGGAGAAGACGGGAGGGGCCGGGCTaGTGGGTGTCTGTGGTGTGG +
Preference number: 2 (lower is better)
Translates to: LGVWLGRPRTLVQAGWRRREGPG*WVSVVW
Trigger: CCACACCACAGACACCCACCAGCCCGGCCCCTCCCG...TCTTCTCCATCCTGCTTGGACCAGGGTCCTGGGTCTTCCCAACCATACCCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp TCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTGGACCCGTGAGGCTGTaGGTGGAGGGTGGGCAGGCG +
Preference number: 2 (lower is better)
Translates to: SGKAGLSCLSPTRHKCTAGPVRL*VEGGQA
Trigger: CGCCTGCCCACCCTCCACCCACAGCCTCACGGGTCC...AGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GCTGGCAGGTGGGGCCTGATCTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGCAACACGCCAAGTCCTaGACCCGTGAGGCTGTGGGT +
Preference number: 2 (lower is better)
Translates to: AGRWGLISGYGWEDPGPWQHAKS*TREAVG
Trigger: ACCCACAGCCTCACGGGTCCAGGACTTGGCGTGTTG...CCAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGGCCCCACCTGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp CTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGGGGCGTGGTGACGGGTaGGGGCCCCTGTCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: LGQGPSWGLVVQSQRVRRGRGDG*GPLSLF
Trigger: AAAGAGGGACAGGGGCCCCCACCCGTCACCACGCCC...CCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GGGCACTTCAGCGAAGGCTCGCGGCTCGAGGGACTCAGGCAGACTCCAGGGAGGCCTGATCTCGGGGTATaGTTGGGAAGACCCAGGACC +
Preference number: 2 (lower is better)
Translates to: GHFSEGSRLEGLRQTPGRPDLGV*LGRPRT
Trigger: GGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGG...CCTCCCTGGAGTCTGCCTGAGTCCCTCGAGCCGCGAGCCTTCGCTGAAGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GGGCACTTCAGCGAAGGCTCGCGGCTCGAGGGACTCAGGCAGACTCCAGGGAGGGGGGCAGGCTCACATTaGTCTGGGTGGCAAATGAGG +
Preference number: 2 (lower is better)
Translates to: GHFSEGSRLEGLRQTPGRGAGSH*SGWQMR
Trigger: CCTCATTTGCCACCCAGACCAATGTGAGCCTGCCCC...CCTCCCTGGAGTCTGCCTGAGTCCCTCGAGCCGCGAGCCTTCGCTGAAGTGCCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR TCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTCCTTGCCACTTCCAATaGGAGGGGGCTGGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCPCHFQ*EGAGGR
Trigger: CCTGCCCCCAGCCCCCTCTCATTGGAAGTGGCAAGG...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR GCA 90 bp CTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTCCCTCCCTCCACTaGCCGGACGTGCTCCAAGCC +
Preference number: 2 (lower is better)
Translates to: LGQGPSWGLVVQSQRVRRCPSLH*PDVLQA
Trigger: GGCTTGGAGCACGTCCGGGCAGTGGAGGGAGGGACA...CCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTTGGGTGTCTGTGGTGTaGGGTGGGGGCCGGGGTCTC +
Preference number: 2 (lower is better)
Translates to: PKTFSPQRGTASPQLPEIWVSVV*GGGRGL
Trigger: GAGACCCCGGCCCCCACCCCACACCACAGACACCCA...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCTGGTGGGTGTCTGTGGTGTaGGGTGGGGGCCGGGGTCTC +
Preference number: 2 (lower is better)
Translates to: EKRVCPVSLLPGTSARLWWVSVV*GGGRGL
Trigger: GAGACCCCGGCCCCCACCCCACACCACAGACACCCA...CCAGAGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp TCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGAGGGCGTGGTGACGGGTaGGGGCCCCTGTCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: SLGQGPSWGLVVQSQRVRGRGDG*GPLSLF
Trigger: AAAGAGGGACAGGGGCCCCCACCCGTCACCACGCCC...TCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GCTGGCAGGTGGGGCCTGATCTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGCCATTGTCCACTGGTTaGGCCCACACAGGGCATAGG +
Preference number: 2 (lower is better)
Translates to: AGRWGLISGYGWEDPGPWPLSTG*AHTGHR
Trigger: CCTATGCCCTGTGTGGGCCCAACCAGTGGACAATGG...CCAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGGCCCCACCTGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTGCTCGGGACAAGGAGTaGCTCACTCGGTCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCARDKE*LTRSLP
Trigger: GGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGC...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GGGCACTTCAGCGAAGGCTCGCGGCTCGAGGGACTCAGGCAGACTCCAGGGAGGGACCAAGTTGGGGCCTaGTTGTCCAAAGCCAACGTG +
Preference number: 2 (lower is better)
Translates to: GHFSEGSRLEGLRQTPGRDQVGA*LSKANV
Trigger: CACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTC...CCTCCCTGGAGTCTGCCTGAGTCCCTCGAGCCGCGAGCCTTCGCTGAAGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR GCA 90 bp ACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGCTGCCGGCTCACTCGGTCCCTaGCCTGTGCAGGGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: TVSVRMCTNVPLGTSVAAGSLGP*PVQGAG
Trigger: ACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCC...GGCAGCTACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR GCA 90 bp TCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGATGTCCCTCCCTCCACTaGCCGGACGTGCTCCAAGCC +
Preference number: 2 (lower is better)
Translates to: SLGQGPSWGLVVQSQRVRCPSLH*PDVLQA
Trigger: GGCTTGGAGCACGTCCGGGCAGTGGAGGGAGGGACA...TCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTACAGAGGGTGGCAGGCTaGCCTGGGCCGCGTGGAGGC +
Preference number: 2 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVQRVAG*PGPRGG
Trigger: GCCTCCACGCGGCCCAGGCCAGCCTGCCACCCTCTG...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR TCA 90 bp ACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGCTGCCCTGGCAGGTGGGGCCTaGTCTCGGGGTATGGTTGGG +
Preference number: 2 (lower is better)
Translates to: TVSVRMCTNVPLGTSVAALAGGA*SRGMVG
Trigger: CCCAACCATACCCCGAGATCAGGCCCCACCTGCCAG...GGCAGCTACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR TCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGGGTCTGGGTGGCAAATaGGGGTCTCCTGCTCCAACC +
Preference number: 2 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCEGLGGK*GSPAPT
Trigger: GGTTGGAGCAGGAGACCCTCATTTGCCACCCAGACC...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR GCA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTCCTACCAGGCACAAGTaGACGGCTCTGGTTCGGGGG +
Preference number: 2 (lower is better)
Translates to: PKTFSPQRGTASPQLPEIPTRHK*TALVRG
Trigger: CCCCCGAACCAGAGCCGTGCACTTGTGCCTGGTAGG...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR GCA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCACCTACCAGGCACAAGTaGACGGCTCTGGTTCGGGGG +
Preference number: 2 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSPTRHK*TALVRG
Trigger: CCCCCGAACCAGAGCCGTGCACTTGTGCCTGGTAGG...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR GCA 90 bp CTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTCCACTGCCCGGACGTaGTCCAAGCCCAGTAGAGCT +
Preference number: 2 (lower is better)
Translates to: LGQGPSWGLVVQSQRVRRSTART*SKPSRA
Trigger: AGCTCTACTGGGCTTGGAGCACGTCCGGGCAGTGGA...CCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp CACCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGACAACACGCCAAGTCCTaGACCCGTGAGGCTGTGGGT +
Preference number: 2 (lower is better)
Translates to: HPRPLAPKEARPHPNCLRQHAKS*TREAVG
Trigger: ACCCACAGCCTCACGGGTCCAGGACTTGGCGTGTTG...TCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp CACCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGAGAAGCTGCCGTGACATaGGGGGTCCTTGTCTCGGGA +
Preference number: 2 (lower is better)
Translates to: HPRPLAPKEARPHPNCLREAAVT*GVLVSG
Trigger: TCCCGAGACAAGGACCCCCCATGTCACGGCAGCTTC...TCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGGAAGGAGGGCCCAGTaGGGGCGGGAGCTCGGGACA +
Preference number: 2 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVGRRAQ*GRELGT
Trigger: TGTCCCGAGCTCCCGCCCCCACTGGGCCCTCCTTCC...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR GCA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGGCTCACTCGGTCCCTaGCCTGTGCAGGGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVGSLGP*PVQGAG
Trigger: ACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCC...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR GCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGAGGTGGCCCCTGTACCTaGCCTGCCGAGGCTGCAGGT +
Preference number: 2 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRGGPCT*PAEAAG
Trigger: ACCTGCAGCCTCGGCAGGGCAGGTACAGGGGCCACC...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp CTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGCCATTGTCCACTGGTTaGGCCCACACAGGGCATAGG +
Preference number: 2 (lower is better)
Translates to: LGQGPSWGLVVQSQRVRRPLSTG*AHTGHR
Trigger: CCTATGCCCTGTGTGGGCCCAACCAGTGGACAATGG...CCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR TCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGACTGGCAGGTGGGGCCTaGTCTCGGGGTATGGTTGGG +
Preference number: 2 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRLAGGA*SRGMVG
Trigger: CCCAACCATACCCCGAGATCAGGCCCCACCTGCCAG...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR GCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGATGTCCCTCCCTCCACTaGCCGGACGTGCTCCAAGCC +
Preference number: 2 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRCPSLH*PDVLQA
Trigger: GGCTTGGAGCACGTCCGGGCAGTGGAGGGAGGGACA...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCACCATTGTCCACTGGTTaGGCCCACACAGGGCATAGG +
Preference number: 2 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSPLSTG*AHTGHR
Trigger: CCTATGCCCTGTGTGGGCCCAACCAGTGGACAATGG...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGGAAGACCCAGGACCCTaGTCCAAGCAGGATGGAGAA +
Preference number: 2 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCEEDPGP*SKQDGE
Trigger: TTCTCCATCCTGCTTGGACCAGGGTCCTGGGTCTTC...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp TCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGAGGGGCAGGCTCACATTaGTCTGGGTGGCAAATGAGG +
Preference number: 2 (lower is better)
Translates to: SLGQGPSWGLVVQSQRVRGAGSH*SGWQMR
Trigger: CCTCATTTGCCACCCAGACCAATGTGAGCCTGCCCC...TCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCAGGGGCAGGCTCACATTaGTCTGGGTGGCAAATGAGG +
Preference number: 2 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSGAGSH*SGWQMR
Trigger: CCTCATTTGCCACCCAGACCAATGTGAGCCTGCCCC...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR GCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGCAAATGAGGGTCTCCTaGTCCAACCCAAGAGGCTTC +
Preference number: 2 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCEQMRVS*SNPRGF
Trigger: GAAGCCTCTTGGGTTGGAGCAGGAGACCCTCATTTG...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR GCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGGTGTCTGTGAGAATGTaGACGAATGTGCCTCTGGGG +
Preference number: 2 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCEVSVRM*TNVPLG
Trigger: CCCCAGAGGCACATTCGTGCACATTCTCACAGACAC...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR GCA 90 bp CACGCTGTTTATTTGCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACGGTGGCCCCTGTACCTaGCCTGCCGAGGCTGCAGGT +
Preference number: 2 (lower is better)
Translates to: HAVYLLLWENQEHRGPRHGGPCT*PAEAAG
Trigger: ACCTGCAGCCTCGGCAGGGCAGGTACAGGGGCCACC...GTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGCAAATAAACAGCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCAGAAGACCCAGGACCCTaGTCCAAGCAGGATGGAGAA +
Preference number: 2 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSEDPGP*SKQDGE
Trigger: TTCTCCATCCTGCTTGGACCAGGGTCCTGGGTCTTC...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp ACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGCTGCCCCTGATCTCGGGGTATaGTTGGGAAGACCCAGGACC +
Preference number: 2 (lower is better)
Translates to: TVSVRMCTNVPLGTSVAAPDLGV*LGRPRT
Trigger: GGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGG...GGCAGCTACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGAGACTGGACCAGGAGGTaGCCTGAGCACTGGGCACCA +
Preference number: 2 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRDWTRR*PEHWAP
Trigger: TGGTGCCCAGTGCTCAGGCCACCTCCTGGTCCAGTC...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR GCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGATCCACTGCCCGGACGTaGTCCAAGCCCAGTAGAGCT +
Preference number: 2 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRSTART*SKPSRA
Trigger: AGCTCTACTGGGCTTGGAGCACGTCCGGGCAGTGGA...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR GCA 90 bp TCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGAGTGTCTGTGAGAATGTaGACGAATGTGCCTCTGGGG +
Preference number: 2 (lower is better)
Translates to: SLGQGPSWGLVVQSQRVRVSVRM*TNVPLG
Trigger: CCCCAGAGGCACATTCGTGCACATTCTCACAGACAC...TCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGAGAAGCTGCCGTGACATaGGGGGTCCTTGTCTCGGGA +
Preference number: 2 (lower is better)
Translates to: ASLGKSRTSGASSHTRSREAAVT*GVLVSG
Trigger: TCCCGAGACAAGGACCCCCCATGTCACGGCAGCTTC...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp TCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGATCACATTGGTCTGGGTaGCAAATGAGGGTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: SLGQGPSWGLVVQSQRVRSHWSG*QMRVSC
Trigger: GCAGGAGACCCTCATTTGCCACCCAGACCAATGTGA...TCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp TCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGAAGGCTCACATTGGTCTaGGTGGCAAATGAGGGTCTC +
Preference number: 2 (lower is better)
Translates to: SLGQGPSWGLVVQSQRVRRLTLV*VANEGL
Trigger: GAGACCCTCATTTGCCACCCAGACCAATGTGAGCCT...TCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR GCA 90 bp CACGCTGTTTATTTGCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACCCTACCAGGCACAAGTaGACGGCTCTGGTTCGGGGG +
Preference number: 2 (lower is better)
Translates to: HAVYLLLWENQEHRGPRHPTRHK*TALVRG
Trigger: CCCCCGAACCAGAGCCGTGCACTTGTGCCTGGTAGG...GTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGCAAATAAACAGCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTACCATTGTCCACTGGTTaGGCCCACACAGGGCATAGG +
Preference number: 2 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVPLSTG*AHTGHR
Trigger: CCTATGCCCTGTGTGGGCCCAACCAGTGGACAATGG...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp ACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGCTGCCAGGCTCACATTGGTCTaGGTGGCAAATGAGGGTCTC +
Preference number: 2 (lower is better)
Translates to: TVSVRMCTNVPLGTSVAARLTLV*VANEGL
Trigger: GAGACCCTCATTTGCCACCCAGACCAATGTGAGCCT...GGCAGCTACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp CACGCTGTTTATTTGCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACGACTGGACCAGGAGGTaGCCTGAGCACTGGGCACCA +
Preference number: 2 (lower is better)
Translates to: HAVYLLLWENQEHRGPRHDWTRR*PEHWAP
Trigger: TGGTGCCCAGTGCTCAGGCCACCTCCTGGTCCAGTC...GTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGCAAATAAACAGCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGACAGGTCAATGACCCCTaGTTCGCCCCGTCTAGAAGA +
Preference number: 2 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRQVNDP*FAPSRR
Trigger: TCTTCTAGACGGGGCGAACCAGGGGTCATTGACCTG...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR GCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGACAAATGAGGGTCTCCTaGTCCAACCCAAGAGGCTTC +
Preference number: 2 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRQMRVS*SNPRGF
Trigger: GAAGCCTCTTGGGTTGGAGCAGGAGACCCTCATTTG...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR TCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGATCCAAAGCCAACGTGTaGGACGGTGTCTGTGAGAAT +
Preference number: 2 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRSKANV*DGVCEN
Trigger: ATTCTCACAGACACCGTCTCACACGTTGGCTTTGGA...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR TCA 90 bp CACGCTGTTTATTTGCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACGTGAGACGGTGTCTGTaGGAATGTGCACGAATGTGC +
Preference number: 2 (lower is better)
Translates to: HAVYLLLWENQEHRGPRHVRRCL*ECARMC
Trigger: GCACATTCGTGCACATTCTCACAGACACCGTCTCAC...GTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGCAAATAAACAGCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR CCA 72 bp GAGGGCCCAGTGGGGGCGGGAGCTCGGGACAAGGAGTaGCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGG +
Preference number: 3 (lower is better)
Translates to: EGPVGAGARDKE*LTRSLPCAGGR
Trigger: CCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCCACTGGGCCCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR GCA 72 bp GGGACCCAGGCTCCCATCCGAGGTGGCCCCTGTACCTaGCCTGCCGAGGCTGCAGGTGGTGACTGGACCAGG +
Preference number: 3 (lower is better)
Translates to: GTQAPIRGGPCT*PAEAAGGDWTR
Trigger: CCTGGTCCAGTCACCACCTGCAGCCTCGGCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCCTGGGTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR CCA 72 bp GTGGGCGCGAGCCGCGTCTGTGAAGCTGCCGTGACATaGGGGGTCCTTGTCTCGGGAAAAGCGGGTCTGTCC +
Preference number: 3 (lower is better)
Translates to: VGASRVCEAAVT*GVLVSGKAGLS
Trigger: GGACAGACCCGCTTTTCCCGAGACAAGGACCCCCCATGTCACGGCAGCTTCACAGACGCGGCTCGCGCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CAA 90 bp GGGCACTTCAGCGAAGGCTCGCGGCTCGAGGGACTCAGGCAGACTCCAGGGAGGGATCTCGGGGTATGGTaGGGAAGACCCAGGACCCTG +
Preference number: 3 (lower is better)
Translates to: GHFSEGSRLEGLRQTPGRDLGVW*GRPRTL
Trigger: CAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATC...CCTCCCTGGAGTCTGCCTGAGTCCCTCGAGCCGCGAGCCTTCGCTGAAGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR CCA 72 bp CTGATCTCGGGGTATGGTTGGGAAGACCCAGGACCCTaGTCCAAGCAGGATGGAGAAGAGGCCGGGGGCGGC +
Preference number: 3 (lower is better)
Translates to: LISGYGWEDPGP*SKQDGEEAGGG
Trigger: GCCGCCCCCGGCCTCTTCTCCATCCTGCTTGGACCAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR CCA 72 bp GCCCGGACGTGCTCCAAGCCCAGTAGAGCTGGCAGGTaGGGCCTGATCTCGGGGTATGGTTGGGAAGACCCA +
Preference number: 3 (lower is better)
Translates to: ARTCSKPSRAGR*GLISGYGWEDP
Trigger: TGGGTCTTCCCAACCATACCCCGAGATCAGGCCCCACCTGCCAGCTCTACTGGGCTTGGAGCACGTCCGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR TCA 72 bp CGTGCTCCAAGCCCAGTAGAGCTGGCAGGTGGGGCCTaGTCTCGGGGTATGGTTGGGAAGACCCAGGACCCT +
Preference number: 3 (lower is better)
Translates to: RAPSPVELAGGA*SRGMVGKTQDP
Trigger: AGGGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGGCCCCACCTGCCAGCTCTACTGGGCTTGGAGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR CCA 72 bp GCACCAGGCTGGAGGTCCCTAGGGCAGGGACCAAGTTaGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGG +
Preference number: 3 (lower is better)
Translates to: APGWRSLGQGPS*GLVVQSQRVRR
Trigger: CCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGACCTCCAGCCTGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR TCA 72 bp GGCTGGGGGCAGGCTCACATTGGTCTGGGTGGCAAATaGGGGTCTCCTGCTCCAACCCAAGAGGCTTCCTGT +
Preference number: 3 (lower is better)
Translates to: GWGQAHIGLGGK*GSPAPTQEASC
Trigger: ACAGGAAGCCTCTTGGGTTGGAGCAGGAGACCCTCATTTGCCACCCAGACCAATGTGAGCCTGCCCCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CAA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCAGATCTCGGGGTATGGTaGGGAAGACCCAGGACCCTG +
Preference number: 3 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSDLGVW*GRPRTL
Trigger: CAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATC...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CAA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGATCTCGGGGTATGGTaGGGAAGACCCAGGACCCTG +
Preference number: 3 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVDLGVW*GRPRTL
Trigger: CAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATC...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR-3UTR CAA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTACAGGAGGGAAGCCCCTaGCCACTTCCAATGAGAGGG +
Preference number: 3 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVQEGSP*PLPMRG
Trigger: CCCTCTCATTGGAAGTGGCAAGGGGCTTCCCTCCTG...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR GCA 72 bp CCAAAGCCAACGTGTGAGACGGTGTCTGTGAGAATGTaGACGAATGTGCCTCTGGGGACGAGTGTAGCTGCC +
Preference number: 3 (lower is better)
Translates to: PKPTCETVSVRM*TNVPLGTSVAA
Trigger: GGCAGCTACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACACGTTGGCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
3UTR TCA 72 bp GACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTaGGACGGTGTCTGTGAGAATGTGCACGAATGTGCC +
Preference number: 3 (lower is better)
Translates to: DQVGAWLSKANV*DGVCENVHECA
Trigger: GGCACATTCGTGCACATTCTCACAGACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGTGCCTGCACACCGGTaGTCTCCCGCCGGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRVPAHR*SPAGRA
Trigger: CGCCCTCCCGGCGGGAGATCACCGGTGTGCAGGCAC...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGCAGGGACCCAGGCTCCCATCCGAGGTGGCCCCTGTACCTGCCCTGCCGAGGCCGGGAGGGGCCGGGCTaGTGGGTGTCTGTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GRDPGSHPRWPLYLPCRGREGPG*WVSVVW
Trigger: CCACACCACAGACACCCACCAGCCCGGCCCCTCCCG...GCCTCGGCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCCTGGGTCCCTGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GGCAGGGACCCAGGCTCCCATCCGAGGTGGCCCCTGTACCTGCCCTGCCGAGGCGGCTCACTCGGTCCCTaGCCTGTGCAGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GRDPGSHPRWPLYLPCRGGSLGP*PVQGAG
Trigger: ACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCC...GCCTCGGCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCCTGGGTCCCTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGCTGGTGGGTGTCTGTaGTGTGGGGTGGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRAGGCL*CGVGAG
Trigger: CCCGGCCCCCACCCCACACCACAGACACCCACCAGC...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAGTGCCTGCACACCGGTaGTCTCCCGCCGGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: ARDKEWLTRSLPCAGGRSVPAHR*SPAGRA
Trigger: CGCCCTCCCGGCGGGAGATCACCGGTGTGCAGGCAC...TGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAATGACCCCTGGTTCGCCGTGCCTGCACACCGGTaGTCTCCCGCCGGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: AHSVPALCRGQVNDPWFAVPAHR*SPAGRA
Trigger: CGCCCTCCCGGCGGGAGATCACCGGTGTGCAGGCAC...GGCGAACCAGGGGTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGTGCAGCCGCTCCTGCTaGGACGTGGTCTCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRCSRSC*DVVSAA
Trigger: GGCGGCAGAGACCACGTCCCAGCAGGAGCGGCTGCA...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CCA 90 bp GGGCACTTCAGCGAAGGCTCGCGGCTCGAGGGACTCAGGCAGACTCCAGGGAGGGGGGGTCGCTGGTGGTaGCCTCGGGCCCCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: GHFSEGSRLEGLRQTPGRGGRWW*PRAPPD
Trigger: ATCAGGCGGGGCCCGAGGCCACCACCAGCGACCCCC...CCTCCCTGGAGTCTGCCTGAGTCCCTCGAGCCGCGAGCCTTCGCTGAAGTGCCC
71% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGTGGGTGTCTGTGGTGTaGGGTGGGGGCCGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRWVSVV*GGGRGL
Trigger: GAGACCCCGGCCCCCACCCCACACCACAGACACCCA...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGGGCGTGGTGACGGGTaGGGGCCCCTGTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRGRGDG*GPLSLF
Trigger: AAAGAGGGACAGGGGCCCCCACCCGTCACCACGCCC...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGCAGGGACCCAGGCTCCCATCCGAGGTGGCCCCTGTACCTGCCCTGCCGAGGCGCTCGGGACAAGGAGTaGCTCACTCGGTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GRDPGSHPRWPLYLPCRGARDKE*LTRSLP
Trigger: GGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGC...GCCTCGGCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCCTGGGTCCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAGTCCTCATCCCCCTCTaGGGCCGAGGACGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: ARDKEWLTRSLPCAGGRSVLIPL*GRGRRP
Trigger: GGGACGCCGTCCTCGGCCTCAGAGGGGGATGAGGAC...TGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp GGCAGGGACCCAGGCTCCCATCCGAGGTGGCCCCTGTACCTGCCCTGCCGAGGCCGCCCCGCGCAAAGCTaGTGTTTATTGTCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: GRDPGSHPRWPLYLPCRGRPAQS*CLLSGR
Trigger: CCGCCCGGACAATAAACAGCAGCTTTGCGCGGGGCG...GCCTCGGCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCCTGGGTCCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGTCGCCTGGCTGTGCCTaGACACCGGTGATCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRSPGCA*TPVISR
Trigger: GCGGGAGATCACCGGTGTGCAGGCACAGCCAGGCGA...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGGCCTCGCCTGGCTGTaGCTGCACACCGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRGLAWL*LHTGDL
Trigger: GAGATCACCGGTGTGCAGGCACAGCCAGGCGAGGCC...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GCTGGCAGGTGGGGCCTGATCTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGCAGAGGGTGGCAGGCTaGCCTGGGCCGCGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: AGRWGLISGYGWEDPGPWQRVAG*PGPRGG
Trigger: GCCTCCACGCGGCCCAGGCCAGCCTGCCACCCTCTG...CCAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGGCCCCACCTGCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGCTGGTCCAAGCAGGATaGAGAAGAGGCCGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRLVQAG*RRGRGR
Trigger: CCGCCCCCGGCCTCTTCTCCATCCTGCTTGGACCAG...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGCTCACTTCCAGGGCCTaGGCAGGCCTCAGTACCCAC +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRLTSRA*AGLSTH
Trigger: GTGGGTACTGAGGCCTGCTCAGGCCCTGGAAGTGAG...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGCGCCCCGCGCAAAGCTaGTGTTTATTGTCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRRPAQS*CLLSGR
Trigger: CCGCCCGGACAATAAACAGCAGCTTTGCGCGGGGCG...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGTTCTCTGCGATGGCCTaGAGCCGCTCCTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRFSAMA*SRSCWD
Trigger: GTCCCAGCAGGAGCGGCTGCAGGCCATCGCAGAGAA...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGTCCCGTTCTCGGCGGTaGCGTCCACAGCATGGACCA +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRSRSRR*RPQHGP
Trigger: TGGTCCATGCTGTGGACGGCACCGCCGAGAACGGGA...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAGGGGACGAGTGTAGCTaGCCCCAGGAGGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: ARDKEWLTRSLPCAGGRSGDECS*PQEGSP
Trigger: GGGGCTTCCCTCCTGGGGGCAGCTACACTCGTCCCC...TGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GGGCACTTCAGCGAAGGCTCGCGGCTCGAGGGACTCAGGCAGACTCCAGGGAGGGGTGGCCCCTGTACCTaGCCTGCCGAGGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GHFSEGSRLEGLRQTPGRGGPCT*PAEAAG
Trigger: ACCTGCAGCCTCGGCAGGGCAGGTACAGGGGCCACC...CCTCCCTGGAGTCTGCCTGAGTCCCTCGAGCCGCGAGCCTTCGCTGAAGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGTGGTGCAGGCTCCTTaGGCTCAGCCGCGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRVVQAP*AQPRLR
Trigger: TCGAAGACGCGGCTGAGCCCAAGGAGCCTGCACCAC...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGAGCACTGCCGTTGGGTaGTGCAGGCTCCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRSTAVG*CRLLGL
Trigger: GAGCCCAAGGAGCCTGCACCACCCAACGGCAGTGCT...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGCAGGGACCCAGGCTCCCATCCGAGGTGGCCCCTGTACCTGCCCTGCCGAGGCTGGCTGCCTTCATCATaGGGGAGCCGTCAACCGTCC +
Preference number: 4 (lower is better)
Translates to: GRDPGSHPRWPLYLPCRGWLPSS*GSRQPS
Trigger: GGACGGTTGACGGCTCCCCCATGATGAAGGCAGCCA...GCCTCGGCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCCTGGGTCCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338448.10
ENST00000592155.5
CDS-3UTR TCA 90 bp GGCAGGGACCCAGGCTCCCATCCGAGGTGGCCCCTGTACCTGCCCTGCCGAGGCGGGGGCCGGCTCACATaGTGGAGCAGCATTTACAAC +
Preference number: 4 (lower is better)
Translates to: GRDPGSHPRWPLYLPCRGGGRLT*WSSIYN
Trigger: GTTGTAAATGCTGCTCCATCATGTGAGCCGGCCCCC...GCCTCGGCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCCTGGGTCCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGGTCTGGGTGGCAAATaGGGGTCTCCTGCTCCAACC +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRGLGGK*GSPAPT
Trigger: GGTTGGAGCAGGAGACCCTCATTTGCCACCCAGACC...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCACCTTGCCACTTCCAATaGGAGGGGGCTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ARDKEWLTRSLPCAGGRSPCHFQ*EGAGGR
Trigger: CCTGCCCCCAGCCCCCTCTCATTGGAAGTGGCAAGG...TGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGTTGGACTTCAGGTGCTaGAGCTGCCTCCGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRLDFRC*SCLRSS
Trigger: GGACGAGCGGAGGCAGCTGCAGCACCTGAAGTCCAA...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp GGGCACTTCAGCGAAGGCTCGCGGCTCGAGGGACTCAGGCAGACTCCAGGGAGGGAGGCTCGGCAGCACTaGCGTTGGGTGGTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GHFSEGSRLEGLRQTPGREARQH*RWVVQA
Trigger: AGCCTGCACCACCCAACGGCAGTGCTGCCGAGCCTC...CCTCCCTGGAGTCTGCCTGAGTCCCTCGAGCCGCGAGCCTTCGCTGAAGTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGTCCACTGCCCGGACGTaGTCCAAGCCCAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRSTART*SKPSRA
Trigger: AGCTCTACTGGGCTTGGAGCACGTCCGGGCAGTGGA...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGCACTTCAGCGAAGGCTCGCGGCTCGAGGGACTCAGGCAGACTCCAGGGAGGCTCCTTGGCAGTGGCTaGGGCGGAGTCTCCACGCTC +
Preference number: 4 (lower is better)
Translates to: GHFSEGSRLEGLRQTPGRLLGSG*GGVSTL
Trigger: GAGCGTGGAGACTCCGCCCCAGCCACTGCCAAGGAG...CCTCCCTGGAGTCTGCCTGAGTCCCTCGAGCCGCGAGCCTTCGCTGAAGTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGCCACTGCCTTCATCATaGGGGAGCCGTCAACCGTCC +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRPLPSS*GSRQPS
Trigger: GGACGGTTGACGGCTCCCCCATGATGAAGGCAGTGG...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000590161.2
CDS-3UTR CCA 90 bp GCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAATGACCCCTGGTTCGCCGAGGAGCTCAGGGGGTaGATCCCGTTCTCGGCGGTG +
Preference number: 4 (lower is better)
Translates to: AHSVPALCRGQVNDPWFAEELRG*IPFSAV
Trigger: CACCGCCGAGAACGGGATCCACCCCCTGAGCTCCTC...GGCGAACCAGGGGTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GCTGGCAGGTGGGGCCTGATCTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGTGGGTGTCTGTGGTGTaGGGTGGGGGCCGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: AGRWGLISGYGWEDPGPWWVSVV*GGGRGL
Trigger: GAGACCCCGGCCCCCACCCCACACCACAGACACCCA...CCAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGGCCCCACCTGCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGCAGGGACCCAGGCTCCCATCCGAGGTGGCCCCTGTACCTGCCCTGCCGAGGCCCATTGTCCACTGGTTaGGCCCACACAGGGCATAGG +
Preference number: 4 (lower is better)
Translates to: GRDPGSHPRWPLYLPCRGPLSTG*AHTGHR
Trigger: CCTATGCCCTGTGTGGGCCCAACCAGTGGACAATGG...GCCTCGGCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCCTGGGTCCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAATGACCCCTGGTTCGCCCTGGTCCAAGCAGGATaGAGAAGAGGCCGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: AHSVPALCRGQVNDPWFALVQAG*RRGRGR
Trigger: CCGCCCCCGGCCTCTTCTCCATCCTGCTTGGACCAG...GGCGAACCAGGGGTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GCTGGCAGGTGGGGCCTGATCTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGGGCTCCCATCCGAGGTaGCCCCTGTACCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: AGRWGLISGYGWEDPGPWGSHPR*PLYLPC
Trigger: GCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCC...CCAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGGCCCCACCTGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGCAGGGACCCAGGCTCCCATCCGAGGTGGCCCCTGTACCTGCCCTGCCGAGGCTGCTGGACAGCACCCTaGTCTCCCCTGTCACCTTGT +
Preference number: 4 (lower is better)
Translates to: GRDPGSHPRWPLYLPCRGCWTAP*SPLSPC
Trigger: ACAAGGTGACAGGGGAGACCAGGGTGCTGTCCAGCA...GCCTCGGCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCCTGGGTCCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338448.10
ENST00000592155.5
CDS-3UTR GCA 90 bp GCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAATGACCCCTGGTTCGCCGCCTTGGACTTCAGGTaGTGCAGCTGCCTCCGCTCG +
Preference number: 4 (lower is better)
Translates to: AHSVPALCRGQVNDPWFAALDFR*CSCLRS
Trigger: CGAGCGGAGGCAGCTGCAGCACCTGAAGTCCAAGGC...GGCGAACCAGGGGTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp GGGCACTTCAGCGAAGGCTCGCGGCTCGAGGGACTCAGGCAGACTCCAGGGAGGTCGGTCCCTGCCCTGTaGAGGGGGCAGGTCAATGAC +
Preference number: 4 (lower is better)
Translates to: GHFSEGSRLEGLRQTPGRSVPAL*RGQVND
Trigger: GTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGA...CCTCCCTGGAGTCTGCCTGAGTCCCTCGAGCCGCGAGCCTTCGCTGAAGTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGGCGCTCCTCCTTGGCTaGACTCGGGGCTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCEALLLG*TRGWGP
Trigger: CGGGCCCCAGCCCCGAGTCCAGCCAAGGAGGAGCGC...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTGCGCTCCTCCTTGGCTaGACTCGGGGCTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCALLLG*TRGWGP
Trigger: CGGGCCCCAGCCCCGAGTCCAGCCAAGGAGGAGCGC...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CCA 90 bp GCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAATGACCCCTGGTTCGCCGTGGTGCAGGCTCCTTaGGCTCAGCCGCGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: AHSVPALCRGQVNDPWFAVVQAP*AQPRLR
Trigger: TCGAAGACGCGGCTGAGCCCAAGGAGCCTGCACCAC...GGCGAACCAGGGGTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAATGACCCCTGGTTCGCCAGCACTGCCGTTGGGTaGTGCAGGCTCCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: AHSVPALCRGQVNDPWFASTAVG*CRLLGL
Trigger: GAGCCCAAGGAGCCTGCACCACCCAACGGCAGTGCT...GGCGAACCAGGGGTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GCTGGCAGGTGGGGCCTGATCTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGCGGCAGCACTGCCGTTaGGTGGTGCAGGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: AGRWGLISGYGWEDPGPWRQHCR*VVQAPW
Trigger: CCAAGGAGCCTGCACCACCCAACGGCAGTGCTGCCG...CCAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGGCCCCACCTGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAATGACCCCTGGTTCGCCCCTGATTCTCTTCCCTaGAGGCGGCCTCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: AHSVPALCRGQVNDPWFAPDSLP*RRPPWE
Trigger: CTCCCACGGAGGCCGCCTCCAGGGAAGAGAATCAGG...GGCGAACCAGGGGTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGCACTTCAGCGAAGGCTCGCGGCTCGAGGGACTCAGGCAGACTCCAGGGAGGTTCATGTCGAGGTCCTaGGGGTCGCTGGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GHFSEGSRLEGLRQTPGRFMSRS*GSLVVA
Trigger: GGCCACCACCAGCGACCCCCAGGACCTCGACATGAA...CCTCCCTGGAGTCTGCCTGAGTCCCTCGAGCCGCGAGCCTTCGCTGAAGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCATTCATGTCGAGGTCCTaGGGGTCGCTGGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ARDKEWLTRSLPCAGGRSFMSRS*GSLVVA
Trigger: GGCCACCACCAGCGACCCCCAGGACCTCGACATGAA...TGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGCAGAGGGTGGCAGGCTaGCCTGGGCCGCGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LGQGPSWGLVVQSQRVRRQRVAG*PGPRGG
Trigger: GCCTCCACGCGGCCCAGGCCAGCCTGCCACCCTCTG...CCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGCCTGATCTCGGGGTATaGTTGGGAAGACCCAGGACC +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRPDLGV*LGRPRT
Trigger: GGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGG...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGGGGCAGGCTCACATTaGTCTGGGTGGCAAATGAGG +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRGAGSH*SGWQMR
Trigger: CCTCATTTGCCACCCAGACCAATGTGAGCCTGCCCC...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAATGACCCCTGGTTCGCCGACTGGACCAGGAGGTaGCCTGAGCACTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: AHSVPALCRGQVNDPWFADWTRR*PEHWAP
Trigger: TGGTGCCCAGTGCTCAGGCCACCTCCTGGTCCAGTC...GGCGAACCAGGGGTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGCACTTCAGCGAAGGCTCGCGGCTCGAGGGACTCAGGCAGACTCCAGGGAGGGACTGGACCAGGAGGTaGCCTGAGCACTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: GHFSEGSRLEGLRQTPGRDWTRR*PEHWAP
Trigger: TGGTGCCCAGTGCTCAGGCCACCTCCTGGTCCAGTC...CCTCCCTGGAGTCTGCCTGAGTCCCTCGAGCCGCGAGCCTTCGCTGAAGTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGCACCGGCGTCTGCTGTaGATTCATCACCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRHRRLL*IHHHLC
Trigger: ACAGAGGTGGTGATGAATTCACAGCAGACGCCGGTG...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR TCA 90 bp CTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGTCCAAGCAGGATGGAGAAGAGTGCCTGCACACCGGTaGTCTCCCGCCGGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: LGVWLGRPRTLVQAGWRRVPAHR*SPAGRA
Trigger: CGCCCTCCCGGCGGGAGATCACCGGTGTGCAGGCAC...TCTTCTCCATCCTGCTTGGACCAGGGTCCTGGGTCTTCCCAACCATACCCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCACCACCAGCTCCGCCGTaGTGGTATCTTGAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: ARDKEWLTRSLPCAGGRSPPAPP*WYLEGP
Trigger: TGGGCCTTCAAGATACCATCACGGCGGAGCTGGTGG...TGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGGCCTCGGGCCCCGCCTaGTTCTCTTCCCTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCEASGPA*FSSLEA
Trigger: CGCCTCCAGGGAAGAGAATCAGGCGGGGCCCGAGGC...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp CTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGGCCTCGGGCCCCGCCTaGTTCTCTTCCCTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: LGQGPSWGLVVQSQRVRRASGPA*FSSLEA
Trigger: CGCCTCCAGGGAAGAGAATCAGGCGGGGCCCGAGGC...CCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAATGACCCCTGGTTCGCCGGTCTGGGTGGCAAATaGGGGTCTCCTGCTCCAACC +
Preference number: 4 (lower is better)
Translates to: AHSVPALCRGQVNDPWFAGLGGK*GSPAPT
Trigger: GGTTGGAGCAGGAGACCCTCATTTGCCACCCAGACC...GGCGAACCAGGGGTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GCTGGCAGGTGGGGCCTGATCTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGCCTACCAGGCACAAGTaGACGGCTCTGGTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: AGRWGLISGYGWEDPGPWPTRHK*TALVRG
Trigger: CCCCCGAACCAGAGCCGTGCACTTGTGCCTGGTAGG...CCAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGGCCCCACCTGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAATGACCCCTGGTTCGCCTCCACTGCCCGGACGTaGTCCAAGCCCAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: AHSVPALCRGQVNDPWFASTART*SKPSRA
Trigger: AGCTCTACTGGGCTTGGAGCACGTCCGGGCAGTGGA...GGCGAACCAGGGGTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCATCCACTGCCCGGACGTaGTCCAAGCCCAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: ARDKEWLTRSLPCAGGRSSTART*SKPSRA
Trigger: AGCTCTACTGGGCTTGGAGCACGTCCGGGCAGTGGA...TGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GGCAGGGACCCAGGCTCCCATCCGAGGTGGCCCCTGTACCTGCCCTGCCGAGGCCAAATGAGGGTCTCCTaGTCCAACCCAAGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: GRDPGSHPRWPLYLPCRGQMRVS*SNPRGF
Trigger: GAAGCCTCTTGGGTTGGAGCAGGAGACCCTCATTTG...GCCTCGGCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCCTGGGTCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GGCAGGGACCCAGGCTCCCATCCGAGGTGGCCCCTGTACCTGCCCTGCCGAGGCGTGTCTGTGAGAATGTaGACGAATGTGCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GRDPGSHPRWPLYLPCRGVSVRM*TNVPLG
Trigger: CCCCAGAGGCACATTCGTGCACATTCTCACAGACAC...GCCTCGGCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCCTGGGTCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGTCCTCAGGGGCGTGTTaGAGACTCGCTTGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRSSGAC*RLACLW
Trigger: CCAAAGACAAGCGAGTCTCCAACACGCCCCTGAGGA...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CCA 90 bp GCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAATGACCCCTGGTTCGCCCCACTGCCTTCATCATaGGGGAGCCGTCAACCGTCC +
Preference number: 4 (lower is better)
Translates to: AHSVPALCRGQVNDPWFAPLPSS*GSRQPS
Trigger: GGACGGTTGACGGCTCCCCCATGATGAAGGCAGTGG...GGCGAACCAGGGGTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000590161.2
CDS-3UTR CCA 90 bp GAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCTGGGGGGGTCGCTGGTGGTaGCCTCGGGCCCCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: EKRVCPVSLLPGTSARLWGGRWW*PRAPPD
Trigger: ATCAGGCGGGGCCCGAGGCCACCACCAGCGACCCCC...CCAGAGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGTCCAAGCAGGATGGAGAAGAGGGGGTCGCTGGTGGTaGCCTCGGGCCCCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: LGVWLGRPRTLVQAGWRRGGRWW*PRAPPD
Trigger: ATCAGGCGGGGCCCGAGGCCACCACCAGCGACCCCC...TCTTCTCCATCCTGCTTGGACCAGGGTCCTGGGTCTTCCCAACCATACCCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTGCTGGTGGGTGTCTGTaGTGTGGGGTGGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCAGGCL*CGVGAG
Trigger: CCCGGCCCCCACCCCACACCACAGACACCCACCAGC...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGGCTGGTGGGTGTCTGTaGTGTGGGGTGGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCEAGGCL*CGVGAG
Trigger: CCCGGCCCCCACCCCACACCACAGACACCCACCAGC...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CACCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGAGCTGGTGGGTGTCTGTaGTGTGGGGTGGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: HPRPLAPKEARPHPNCLRAGGCL*CGVGAG
Trigger: CCCGGCCCCCACCCCACACCACAGACACCCACCAGC...TCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAATGACCCCTGGTTCGCCGAAGCTGCCGTGACATaGGGGGTCCTTGTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: AHSVPALCRGQVNDPWFAEAAVT*GVLVSG
Trigger: TCCCGAGACAAGGACCCCCCATGTCACGGCAGCTTC...GGCGAACCAGGGGTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGTCCTTGTCTCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACACAGAGGGTGGCAGGCTaGCCTGGGCCGCGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GSLSREKRVCPVSLLPGTQRVAG*PGPRGG
Trigger: GCCTCCACGCGGCCCAGGCCAGCCTGCCACCCTCTG...TGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGAGACAAGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp TCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTGTCCTCATCCCCCTCTaGGGCCGAGGACGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: SGKAGLSCLSPTRHKCTAVLIPL*GRGRRP
Trigger: GGGACGCCGTCCTCGGCCTCAGAGGGGGATGAGGAC...AGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR TCA 90 bp GGGTCCTTGTCTCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAGCCTCGGGCCCCGCCTaGTTCTCTTCCCTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: GSLSREKRVCPVSLLPGTASGPA*FSSLEA
Trigger: CGCCTCCAGGGAAGAGAATCAGGCGGGGCCCGAGGC...TGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGAGACAAGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAGGGGGCCGGCTCACATaGTGGAGCAGCATTTACAAC +
Preference number: 4 (lower is better)
Translates to: ARDKEWLTRSLPCAGGRSGGRLT*WSSIYN
Trigger: GTTGTAAATGCTGCTCCATCATGTGAGCCGGCCCCC...TGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGTGAGACGGTGTCTGTaGGAATGTGCACGAATGTGC +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRVRRCL*ECARMC
Trigger: GCACATTCGTGCACATTCTCACAGACACCGTCTCAC...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp CACCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGAGCCTGCAGCCGCTCCTaGTGGGACGTGGTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: HPRPLAPKEARPHPNCLRACSRS*WDVVSA
Trigger: GGCAGAGACCACGTCCCAGCAGGAGCGGCTGCAGGC...TCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTCCCGGCCGTGGACCCTaGCTCGCTCAGCGTGACCTC +
Preference number: 4 (lower is better)
Translates to: PKTFSPQRGTASPQLPEIPGRGP*LAQRDL
Trigger: GAGGTCACGCTGAGCGAGGCAGGGTCCACGGCCGGG...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGCAAATGAGGGTCTCCTaGTCCAACCCAAGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRQMRVS*SNPRGF
Trigger: GAAGCCTCTTGGGTTGGAGCAGGAGACCCTCATTTG...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp TCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACCCAGAGGGAGCGGCTaGCGAGGGAGCAGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: SLGQGPSWGLVVQSQRVRPRGSG*RGSSVV
Trigger: CACCACGCTGCTCCCTCGGCAGCCGCTCCCTCTGGG...TCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338448.10
ENST00000592155.5
CDS-3UTR GCA 90 bp GAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCTGGCCCAGAGGGAGCGGCTaGCGAGGGAGCAGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: EKRVCPVSLLPGTSARLWPRGSG*RGSSVV
Trigger: CACCACGCTGCTCCCTCGGCAGCCGCTCCCTCTGGG...CCAGAGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338448.10
ENST00000592155.5
CDS-3UTR CCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGGGACGTGGCCTCGCCTaGCTGTGCCTGCACACCGGT +
Preference number: 4 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCEGRGLA*LCLHTG
Trigger: ACCGGTGTGCAGGCACAGCCAGGCGAGGCCACGTCC...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp TCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGGAGGGGCCGGGCTaGTGGGTGTCTGTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SLGQGPSWGLVVQSQRVRREGPG*WVSVVW
Trigger: CCACACCACAGACACCCACCAGCCCGGCCCCTCCCG...TCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCAGGACCCGTGAGGCTGTaGGTGGAGGGTGGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSGPVRL*VEGGQA
Trigger: CGCCTGCCCACCCTCCACCCACAGCCTCACGGGTCC...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCTGGGGACCCGTGAGGCTGTaGGTGGAGGGTGGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: EKRVCPVSLLPGTSARLWGPVRL*VEGGQA
Trigger: CGCCTGCCCACCCTCCACCCACAGCCTCACGGGTCC...CCAGAGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GCTGGCAGGTGGGGCCTGATCTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGGAAGCTGCCGTGACATaGGGGGTCCTTGTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: AGRWGLISGYGWEDPGPWEAAVT*GVLVSG
Trigger: TCCCGAGACAAGGACCCCCCATGTCACGGCAGCTTC...CCAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGGCCCCACCTGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTGGAAGGAGGGCCCAGTaGGGGCGGGAGCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: PKTFSPQRGTASPQLPEIGRRAQ*GRELGT
Trigger: TGTCCCGAGCTCCCGCCCCCACTGGGCCCTCCTTCC...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTGGCTCCCATCCGAGGTaGCCCCTGTACCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCGSHPR*PLYLPC
Trigger: GCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCC...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTGCCGAGGGAGCAGCGTaGTGCTGGACAGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCAEGAA*CWTAPW
Trigger: CCAGGGTGCTGTCCAGCACCACGCTGCTCCCTCGGC...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338448.10
ENST00000592155.5
CDS-3UTR TCA 90 bp ACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGCTGCCGCCTCGGGCCCCGCCTaGTTCTCTTCCCTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: TVSVRMCTNVPLGTSVAAASGPA*FSSLEA
Trigger: CGCCTCCAGGGAAGAGAATCAGGCGGGGCCCGAGGC...GGCAGCTACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp CTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGCCTTGCCACTTCCAATaGGAGGGGGCTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LGQGPSWGLVVQSQRVRRPCHFQ*EGAGGR
Trigger: CCTGCCCCCAGCCCCCTCTCATTGGAAGTGGCAAGG...CCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp ACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGCTGCCCCCGGCCGTGGACCCTaGCTCGCTCAGCGTGACCTC +
Preference number: 4 (lower is better)
Translates to: TVSVRMCTNVPLGTSVAAPGRGP*LAQRDL
Trigger: GAGGTCACGCTGAGCGAGGCAGGGTCCACGGCCGGG...GGCAGCTACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTGGCCTCGCCTGGCTGTaGCTGCACACCGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCGLAWL*LHTGDL
Trigger: GAGATCACCGGTGTGCAGGCACAGCCAGGCGAGGCC...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GGGTCCTTGTCTCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAGGCTCACTCGGTCCCTaGCCTGTGCAGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GSLSREKRVCPVSLLPGTGSLGP*PVQGAG
Trigger: ACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCC...TGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGAGACAAGGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTTGTCCCTCCCTCCACTaGCCGGACGTGCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCCPSLH*PDVLQA
Trigger: GGCTTGGAGCACGTCCGGGCAGTGGAGGGAGGGACA...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCAGGGGACGAGTGTAGCTaGCCCCAGGAGGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSGDECS*PQEGSP
Trigger: GGGGCTTCCCTCCTGGGGGCAGCTACACTCGTCCCC...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp TCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGAGGTGGCCCCTGTACCTaGCCTGCCGAGGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SLGQGPSWGLVVQSQRVRGGPCT*PAEAAG
Trigger: ACCTGCAGCCTCGGCAGGGCAGGTACAGGGGCCACC...TCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCTGGGGTGGCCCCTGTACCTaGCCTGCCGAGGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: EKRVCPVSLLPGTSARLWGGPCT*PAEAAG
Trigger: ACCTGCAGCCTCGGCAGGGCAGGTACAGGGGCCACC...CCAGAGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCTGGTGCAGCCGCTCCTGCTaGGACGTGGTCTCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: EKRVCPVSLLPGTSARLWCSRSC*DVVSAA
Trigger: GGCGGCAGAGACCACGTCCCAGCAGGAGCGGCTGCA...CCAGAGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGCTCCTTGGCAGTGGCTaGGGCGGAGTCTCCACGCTC +
Preference number: 4 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCELLGSG*GGVSTL
Trigger: GAGCGTGGAGACTCCGCCCCAGCCACTGCCAAGGAG...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CCA 90 bp TCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCCGCCGCGTTCTCCTTaGCAGTGGCTGGGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: SGKAGLSCLSPTRHKCTAPPRSP*QWLGRS
Trigger: ACTCCGCCCCAGCCACTGCCAAGGAGAACGCGGCGG...AGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CCA 90 bp GAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCTGGCCGCCGCGTTCTCCTTaGCAGTGGCTGGGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: EKRVCPVSLLPGTSARLWPPRSP*QWLGRS
Trigger: ACTCCGCCCCAGCCACTGCCAAGGAGAACGCGGCGG...CCAGAGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CCA 90 bp GGGCACTTCAGCGAAGGCTCGCGGCTCGAGGGACTCAGGCAGACTCCAGGGAGGACCTCGTCCGCTTTGTaGATGAGTTCGTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: GHFSEGSRLEGLRQTPGRTSSAL*MSSSTS
Trigger: CGAGGTGGACGAACTCATCCACAAAGCGGACGAGGT...CCTCCCTGGAGTCTGCCTGAGTCCCTCGAGCCGCGAGCCTTCGCTGAAGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp TCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTGGACGTGGCCTCGCCTaGCTGTGCCTGCACACCGGT +
Preference number: 4 (lower is better)
Translates to: SGKAGLSCLSPTRHKCTAGRGLA*LCLHTG
Trigger: ACCGGTGTGCAGGCACAGCCAGGCGAGGCCACGTCC...AGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGTCCAAGCAGGATGGAGAAGAGGACGTGGCCTCGCCTaGCTGTGCCTGCACACCGGT +
Preference number: 4 (lower is better)
Translates to: LGVWLGRPRTLVQAGWRRGRGLA*LCLHTG
Trigger: ACCGGTGTGCAGGCACAGCCAGGCGAGGCCACGTCC...TCTTCTCCATCCTGCTTGGACCAGGGTCCTGGGTCTTCCCAACCATACCCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTCGGCAGCACTGCCGTTaGGTGGTGCAGGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCRQHCR*VVQAPW
Trigger: CCAAGGAGCCTGCACCACCCAACGGCAGTGCTGCCG...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGTCCAAGCAGGATGGAGAAGATGGGTGTCTGTGGTGTaGGGTGGGGGCCGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LGVWLGRPRTLVQAGWRRWVSVV*GGGRGL
Trigger: GAGACCCCGGCCCCCACCCCACACCACAGACACCCA...TCTTCTCCATCCTGCTTGGACCAGGGTCCTGGGTCTTCCCAACCATACCCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp ACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGCTGCCCGGGAGGGGCCGGGCTaGTGGGTGTCTGTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: TVSVRMCTNVPLGTSVAAREGPG*WVSVVW
Trigger: CCACACCACAGACACCCACCAGCCCGGCCCCTCCCG...GGCAGCTACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTGGGCGTGGTGACGGGTaGGGGCCCCTGTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PKTFSPQRGTASPQLPEIGRGDG*GPLSLF
Trigger: AAAGAGGGACAGGGGCCCCCACCCGTCACCACGCCC...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGTCCTTGTCTCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAGGGCGTGGTGACGGGTaGGGGCCCCTGTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GSLSREKRVCPVSLLPGTGRGDG*GPLSLF
Trigger: AAAGAGGGACAGGGGCCCCCACCCGTCACCACGCCC...TGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGAGACAAGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp ACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGCTGCCGGAAGGAGGGCCCAGTaGGGGCGGGAGCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: TVSVRMCTNVPLGTSVAAGRRAQ*GRELGT
Trigger: TGTCCCGAGCTCCCGCCCCCACTGGGCCCTCCTTCC...GGCAGCTACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CACCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGACTGGTCCAAGCAGGATaGAGAAGAGGCCGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: HPRPLAPKEARPHPNCLRLVQAG*RRGRGR
Trigger: CCGCCCCCGGCCTCTTCTCCATCCTGCTTGGACCAG...TCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAGAAGACCCAGGACCCTaGTCCAAGCAGGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: ARDKEWLTRSLPCAGGRSEDPGP*SKQDGE
Trigger: TTCTCCATCCTGCTTGGACCAGGGTCCTGGGTCTTC...TGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GCTGGCAGGTGGGGCCTGATCTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGTGCTGGACAGCACCCTaGTCTCCCCTGTCACCTTGT +
Preference number: 4 (lower is better)
Translates to: AGRWGLISGYGWEDPGPWCWTAP*SPLSPC
Trigger: ACAAGGTGACAGGGGAGACCAGGGTGCTGTCCAGCA...CCAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGGCCCCACCTGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338448.10
ENST00000592155.5
CDS-3UTR CCA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTGCCGAGGGAGCAGCGTaGTGCTGGACAGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: PKTFSPQRGTASPQLPEIAEGAA*CWTAPW
Trigger: CCAGGGTGCTGTCCAGCACCACGCTGCTCCCTCGGC...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338448.10
ENST00000592155.5
CDS-3UTR TCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTCTGCCTCGCTCAGCGTaGCCTCGTCCGCTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCLPRSA*PRPLCG
Trigger: TCCACAAAGCGGACGAGGTCACGCTGAGCGAGGCAG...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTCTGGCAGGTGGGGCCTaGTCTCGGGGTATGGTTGGG +
Preference number: 4 (lower is better)
Translates to: PKTFSPQRGTASPQLPEILAGGA*SRGMVG
Trigger: CCCAACCATACCCCGAGATCAGGCCCCACCTGCCAG...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp TCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCTGGCAGGTGGGGCCTaGTCTCGGGGTATGGTTGGG +
Preference number: 4 (lower is better)
Translates to: SGKAGLSCLSPTRHKCTALAGGA*SRGMVG
Trigger: CCCAACCATACCCCGAGATCAGGCCCCACCTGCCAG...AGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCTGGCCTTGCCACTTCCAATaGGAGGGGGCTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: EKRVCPVSLLPGTSARLWPCHFQ*EGAGGR
Trigger: CCTGCCCCCAGCCCCCTCTCATTGGAAGTGGCAAGG...CCAGAGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGCTGGGACGTGGTCTCTaGCGCCAGGACCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCELGRGL*RQDLHL
Trigger: GAGATGGAGGTCCTGGCGGCAGAGACCACGTCCCAG...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGTTCTCTGCGATGGCCTaGAGCCGCTCCTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCEFSAMA*SRSCWD
Trigger: GTCCCAGCAGGAGCGGCTGCAGGCCATCGCAGAGAA...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCATCGCCTGGCTGTGCCTaGACACCGGTGATCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSSPGCA*TPVISR
Trigger: GCGGGAGATCACCGGTGTGCAGGCACAGCCAGGCGA...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GGGTCCTTGTCTCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAGGCCTCGCCTGGCTGTaGCTGCACACCGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: GSLSREKRVCPVSLLPGTGLAWL*LHTGDL
Trigger: GAGATCACCGGTGTGCAGGCACAGCCAGGCGAGGCC...TGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGAGACAAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCAGGCCTCGCCTGGCTGTaGCTGCACACCGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSGLAWL*LHTGDL
Trigger: GAGATCACCGGTGTGCAGGCACAGCCAGGCGAGGCC...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTACTGCCGTTGGGTGGTaGAGGCTCCTTGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCTAVGW*RLLGLS
Trigger: GCTGAGCCCAAGGAGCCTGCACCACCCAACGGCAGT...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp TCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTGAGGCTCGGCAGCACTaGCGTTGGGTGGTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SGKAGLSCLSPTRHKCTAEARQH*RWVVQA
Trigger: AGCCTGCACCACCCAACGGCAGTGCTGCCGAGCCTC...AGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GGGTCCTTGTCTCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAGAGGCTCGGCAGCACTaGCGTTGGGTGGTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GSLSREKRVCPVSLLPGTEARQH*RWVVQA
Trigger: AGCCTGCACCACCCAACGGCAGTGCTGCCGAGCCTC...TGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGAGACAAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp CACCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGACCTACCAGGCACAAGTaGACGGCTCTGGTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: HPRPLAPKEARPHPNCLRPTRHK*TALVRG
Trigger: CCCCCGAACCAGAGCCGTGCACTTGTGCCTGGTAGG...TCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGTCGGTCCCTGCCCTGTaGAGGGGGCAGGTCAATGAC +
Preference number: 4 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCESVPAL*RGQVND
Trigger: GTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGA...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp CACCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATCGGTCCCTGCCCTGTaGAGGGGGCAGGTCAATGAC +
Preference number: 4 (lower is better)
Translates to: HPRPLAPKEARPHPNCLRSVPAL*RGQVND
Trigger: GTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGA...TCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp TCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTTGTCCCTCCCTCCACTaGCCGGACGTGCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: SGKAGLSCLSPTRHKCTACPSLH*PDVLQA
Trigger: GGCTTGGAGCACGTCCGGGCAGTGGAGGGAGGGACA...AGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GGGTCCTTGTCTCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACATGTCCCTCCCTCCACTaGCCGGACGTGCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: GSLSREKRVCPVSLLPGTCPSLH*PDVLQA
Trigger: GGCTTGGAGCACGTCCGGGCAGTGGAGGGAGGGACA...TGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGAGACAAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCTGGTGTCCCTCCCTCCACTaGCCGGACGTGCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: EKRVCPVSLLPGTSARLWCPSLH*PDVLQA
Trigger: GGCTTGGAGCACGTCCGGGCAGTGGAGGGAGGGACA...CCAGAGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGGAGGGAGCAGCGTGGTaGTGGACAGCACCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCEEGAAW*WTAPWS
Trigger: AGACCAGGGTGCTGTCCAGCACCACGCTGCTCCCTC...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338448.10
ENST00000592155.5
CDS-3UTR CCA 90 bp GAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCTGGGCTCCTGCTGGGACGTaGTCTCTGCCGCCAGGACCT +
Preference number: 4 (lower is better)
Translates to: EKRVCPVSLLPGTSARLWAPAGT*SLPPGP
Trigger: AGGTCCTGGCGGCAGAGACCACGTCCCAGCAGGAGC...CCAGAGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CCA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCAGCTCCTGCTGGGACGTaGTCTCTGCCGCCAGGACCT +
Preference number: 4 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSAPAGT*SLPPGP
Trigger: AGGTCCTGGCGGCAGAGACCACGTCCCAGCAGGAGC...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CCA 90 bp GAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCTGGTCTTGCGCTCCTCCTTaGCTGGACTCGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: EKRVCPVSLLPGTSARLWSCAPP*LDSGLG
Trigger: CCCCAGCCCCGAGTCCAGCCAAGGAGGAGCGCAAGA...CCAGAGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CCA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCATCTTGCGCTCCTCCTTaGCTGGACTCGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSSCAPP*LDSGLG
Trigger: CCCCAGCCCCGAGTCCAGCCAAGGAGGAGCGCAAGA...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CCA 90 bp GCTGGCAGGTGGGGCCTGATCTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGGTGCCGTCCACAGCATaGACCACTGCCTTCATCATG +
Preference number: 4 (lower is better)
Translates to: AGRWGLISGYGWEDPGPWVPSTA*TTAFIM
Trigger: CATGATGAAGGCAGTGGTCCATGCTGTGGACGGCAC...CCAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGGCCCCACCTGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000590161.2
CDS-3UTR CCA 90 bp ACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGCTGCCGGACGTGGCCTCGCCTaGCTGTGCCTGCACACCGGT +
Preference number: 4 (lower is better)
Translates to: TVSVRMCTNVPLGTSVAAGRGLA*LCLHTG
Trigger: ACCGGTGTGCAGGCACAGCCAGGCGAGGCCACGTCC...GGCAGCTACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGGTGGTGCAGGCTCCTTaGGCTCAGCCGCGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCEVVQAP*AQPRLR
Trigger: TCGAAGACGCGGCTGAGCCCAAGGAGCCTGCACCAC...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGGTGGTGCAGGCTCCTTaGGCTCAGCCGCGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: LGQGPSWGLVVQSQRVRRVVQAP*AQPRLR
Trigger: TCGAAGACGCGGCTGAGCCCAAGGAGCCTGCACCAC...CCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CACCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGAAGCACTGCCGTTGGGTaGTGCAGGCTCCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: HPRPLAPKEARPHPNCLRSTAVG*CRLLGL
Trigger: GAGCCCAAGGAGCCTGCACCACCCAACGGCAGTGCT...TCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CACCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGACCTGATTCTCTTCCCTaGAGGCGGCCTCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: HPRPLAPKEARPHPNCLRPDSLP*RRPPWE
Trigger: CTCCCACGGAGGCCGCCTCCAGGGAAGAGAATCAGG...TCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTCGCTGGTGGTaGCCTCGGGCCCCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRGGRWW*PRAPPD
Trigger: ATCAGGCGGGGCCCGAGGCCACCACCAGCGACCCCC...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGACAGAGGGTGGCAGGCTaGCCTGGGCCGCGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRQRVAG*PGPRGG
Trigger: GCCTCCACGCGGCCCAGGCCAGCCTGCCACCCTCTG...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GCTGGCAGGTGGGGCCTGATCTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGCAGGTCAATGACCCCTaGTTCGCCCCGTCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: AGRWGLISGYGWEDPGPWQVNDP*FAPSRR
Trigger: TCTTCTAGACGGGGCGAACCAGGGGTCATTGACCTG...CCAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGGCCCCACCTGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCAGCTCGGGACAAGGAGTaGCTCACTCGGTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSARDKE*LTRSLP
Trigger: GGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGC...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGTCCAAGCAGGATGGAGAAGAGCTCGGGACAAGGAGTaGCTCACTCGGTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LGVWLGRPRTLVQAGWRRARDKE*LTRSLP
Trigger: GGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGC...TCTTCTCCATCCTGCTTGGACCAGGGTCCTGGGTCTTCCCAACCATACCCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGCACTTCAGCGAAGGCTCGCGGCTCGAGGGACTCAGGCAGACTCCAGGGAGGTCACATTGGTCTGGGTaGCAAATGAGGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GHFSEGSRLEGLRQTPGRSHWSG*QMRVSC
Trigger: GCAGGAGACCCTCATTTGCCACCCAGACCAATGTGA...CCTCCCTGGAGTCTGCCTGAGTCCCTCGAGCCGCGAGCCTTCGCTGAAGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAATGACCCCTGGTTCGCCAGGCTCACATTGGTCTaGGTGGCAAATGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: AHSVPALCRGQVNDPWFARLTLV*VANEGL
Trigger: GAGACCCTCATTTGCCACCCAGACCAATGTGAGCCT...GGCGAACCAGGGGTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTCTGCCTCGCTCAGCGTaGCCTCGTCCGCTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: PKTFSPQRGTASPQLPEILPRSA*PRPLCG
Trigger: TCCACAAAGCGGACGAGGTCACGCTGAGCGAGGCAG...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCACTCACTTCCAGGGCCTaGGCAGGCCTCAGTACCCAC +
Preference number: 4 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSLTSRA*AGLSTH
Trigger: GTGGGTACTGAGGCCTGCTCAGGCCCTGGAAGTGAG...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp CTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGCGTCCTCGTAGACTTTaGTGCCCAGAGGGAGCGGCT +
Preference number: 4 (lower is better)
Translates to: LGQGPSWGLVVQSQRVRRRPRRL*CPEGAA
Trigger: AGCCGCTCCCTCTGGGCATCAAAGTCTACGAGGACG...CCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338448.10
ENST00000592155.5
CDS-3UTR TCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGCGTCCTCGTAGACTTTaGTGCCCAGAGGGAGCGGCT +
Preference number: 4 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCERPRRL*CPEGAA
Trigger: AGCCGCTCCCTCTGGGCATCAAAGTCTACGAGGACG...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338448.10
ENST00000592155.5
CDS-3UTR GCA 90 bp CTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGTCCAAGCAGGATGGAGAAGACTGGGACGTGGTCTCTaGCGCCAGGACCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: LGVWLGRPRTLVQAGWRRLGRGL*RQDLHL
Trigger: GAGATGGAGGTCCTGGCGGCAGAGACCACGTCCCAG...TCTTCTCCATCCTGCTTGGACCAGGGTCCTGGGTCTTCCCAACCATACCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp CTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTTCTCGATCTCCGCCTaGCGCTTCCGCTTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: LGQGPSWGLVVQSQRVRRFSISA*RFRFSA
Trigger: CGCAGAGAAGCGGAAGCGGCAGGCGGAGATCGAGAA...CCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp TCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCGCTCGTCCTCCAGCTaGCGGCGCTTGTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: SGKAGLSCLSPTRHKCTARSSSS*RRLFSI
Trigger: GATCGAGAACAAGCGCCGGCAGCTGGAGGACGAGCG...AGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTCGCTCGTCCTCCAGCTaGCGGCGCTTGTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: PKTFSPQRGTASPQLPEIRSSSS*RRLFSI
Trigger: GATCGAGAACAAGCGCCGGCAGCTGGAGGACGAGCG...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTCCAGCGCTCCCGCAGTaGCTTGGACTTCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PKTFSPQRGTASPQLPEIPALPQ*LGLQVL
Trigger: CAGCACCTGAAGTCCAAGGCACTGCGGGAGCGCTGG...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp GAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCTGGGCTTGTCTTTGGGCGTaGCCACCGGCGTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: EKRVCPVSLLPGTSARLWACLWA*PPASAV
Trigger: CACAGCAGACGCCGGTGGGCACGCCCAAAGACAAGC...CCAGAGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp TCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGAGCTTGTCTTTGGGCGTaGCCACCGGCGTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SLGQGPSWGLVVQSQRVRACLWA*PPASAV
Trigger: CACAGCAGACGCCGGTGGGCACGCCCAAAGACAAGC...TCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp TCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTTCCCGTTCTCGGCGGTaGCGTCCACAGCATGGACCA +
Preference number: 4 (lower is better)
Translates to: SGKAGLSCLSPTRHKCTASRSRR*RPQHGP
Trigger: TGGTCCATGCTGTGGACGGCACCGCCGAGAACGGGA...AGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCTGGACTGCCGTTGGGTGGTaGAGGCTCCTTGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: EKRVCPVSLLPGTSARLWTAVGW*RLLGLS
Trigger: GCTGAGCCCAAGGAGCCTGCACCACCCAACGGCAGT...CCAGAGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTACTGCCGTTGGGTGGTaGAGGCTCCTTGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PKTFSPQRGTASPQLPEITAVGW*RLLGLS
Trigger: GCTGAGCCCAAGGAGCCTGCACCACCCAACGGCAGT...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCAACTGCCGTTGGGTGGTaGAGGCTCCTTGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSTAVGW*RLLGLS
Trigger: GCTGAGCCCAAGGAGCCTGCACCACCCAACGGCAGT...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp CACCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATCCACTGCCCGGACGTaGTCCAAGCCCAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: HPRPLAPKEARPHPNCLRSTART*SKPSRA
Trigger: AGCTCTACTGGGCTTGGAGCACGTCCGGGCAGTGGA...TCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp CTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGTCCAAGCAGGATGGAGAAGAGAGGGAGCAGCGTGGTaGTGGACAGCACCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LGVWLGRPRTLVQAGWRREGAAW*WTAPWS
Trigger: AGACCAGGGTGCTGTCCAGCACCACGCTGCTCCCTC...TCTTCTCCATCCTGCTTGGACCAGGGTCCTGGGTCTTCCCAACCATACCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338448.10
ENST00000592155.5
CDS-3UTR CCA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTTCCGCTTCTCTGCGATaGCCTGCAGCCGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PKTFSPQRGTASPQLPEISASLR*PAAAPA
Trigger: AGCAGGAGCGGCTGCAGGCCATCGCAGAGAAGCGGA...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGAGACTCGCTTGTCTTTaGGCGTGCCCACCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCERLACL*ACPPAS
Trigger: AGACGCCGGTGGGCACGCCCAAAGACAAGCGAGTCT...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CCA 90 bp ACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGCTGCCCGGCAGCACTGCCGTTaGGTGGTGCAGGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: TVSVRMCTNVPLGTSVAARQHCR*VVQAPW
Trigger: CCAAGGAGCCTGCACCACCCAACGGCAGTGCTGCCG...GGCAGCTACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTCCTGATTCTCTTCCCTaGAGGCGGCCTCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PKTFSPQRGTASPQLPEIPDSLP*RRPPWE
Trigger: CTCCCACGGAGGCCGCCTCCAGGGAAGAGAATCAGG...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCTGGCCTGATTCTCTTCCCTaGAGGCGGCCTCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: EKRVCPVSLLPGTSARLWPDSLP*RRPPWE
Trigger: CTCCCACGGAGGCCGCCTCCAGGGAAGAGAATCAGG...CCAGAGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCATTCATGTCGAGGTCCTaGGGGTCGCTGGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSFMSRS*GSLVVA
Trigger: GGCCACCACCAGCGACCCCCAGGACCTCGACATGAA...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGAGGACCCGTGAGGCTGTaGGTGGAGGGTGGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRGPVRL*VEGGQA
Trigger: CGCCTGCCCACCCTCCACCCACAGCCTCACGGGTCC...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTCAACACGCCAAGTCCTaGACCCGTGAGGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCQHAKS*TREAVG
Trigger: ACCCACAGCCTCACGGGTCCAGGACTTGGCGTGTTG...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGGAAGCTGCCGTGACATaGGGGGTCCTTGTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCEEAAVT*GVLVSG
Trigger: TCCCGAGACAAGGACCCCCCATGTCACGGCAGCTTC...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGAGGAAGGAGGGCCCAGTaGGGGCGGGAGCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRGRRAQ*GRELGT
Trigger: TGTCCCGAGCTCCCGCCCCCACTGGGCCCTCCTTCC...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCTGGGACTGGACCAGGAGGTaGCCTGAGCACTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: EKRVCPVSLLPGTSARLWDWTRR*PEHWAP
Trigger: TGGTGCCCAGTGCTCAGGCCACCTCCTGGTCCAGTC...CCAGAGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GCTGGCAGGTGGGGCCTGATCTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGTCCTCAGGGGCGTGTTaGAGACTCGCTTGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: AGRWGLISGYGWEDPGPWSSGAC*RLACSS
Trigger: TGAACTACAAGCGAGTCTCCAACACGCCCCTGAGGA...CCAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGGCCCCACCTGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GGGTCCTTGTCTCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACACCACCAGCTCCGCCGTaGTGGTATCTTGAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GSLSREKRVCPVSLLPGTPPAPP*WYLEGP
Trigger: TGGGCCTTCAAGATACCATCACGGCGGAGCTGGTGG...TGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGAGACAAGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp TCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACCACCAGCTCCGCCGTaGTGGTATCTTGAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SLGQGPSWGLVVQSQRVRPPAPP*WYLEGP
Trigger: TGGGCCTTCAAGATACCATCACGGCGGAGCTGGTGG...TCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTGGGGGCCGGCTCACATaGTGGAGCAGCATTTACAAC +
Preference number: 4 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCGGRLT*WSSIYN
Trigger: GTTGTAAATGCTGCTCCATCATGTGAGCCGGCCCCC...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp TCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGAGGTCTGGGTGGCAAATaGGGGTCTCCTGCTCCAACC +
Preference number: 4 (lower is better)
Translates to: SLGQGPSWGLVVQSQRVRGLGGK*GSPAPT
Trigger: GGTTGGAGCAGGAGACCCTCATTTGCCACCCAGACC...TCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCTGGGGTCTGGGTGGCAAATaGGGGTCTCCTGCTCCAACC +
Preference number: 4 (lower is better)
Translates to: EKRVCPVSLLPGTSARLWGLGGK*GSPAPT
Trigger: GGTTGGAGCAGGAGACCCTCATTTGCCACCCAGACC...CCAGAGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCTGGTTCTCGATCTCCGCCTaGCGCTTCCGCTTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: EKRVCPVSLLPGTSARLWFSISA*RFRFSA
Trigger: CGCAGAGAAGCGGAAGCGGCAGGCGGAGATCGAGAA...CCAGAGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp GGGTCCTTGTCTCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACATTGGACTTCAGGTGCTaGAGCTGCCTCCGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: GSLSREKRVCPVSLLPGTLDFRC*SCLRSS
Trigger: GGACGAGCGGAGGCAGCTGCAGCACCTGAAGTCCAA...TGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGAGACAAGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp GCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAATGACCCCTGGTTCGCCCAGCATTTACAACGGTaGTTCTTCATGTCGAGGTCC +
Preference number: 4 (lower is better)
Translates to: AHSVPALCRGQVNDPWFAQHLQR*FFMSRS
Trigger: GGACCTCGACATGAAGAAGCACCGTTGTAAATGCTG...GGCGAACCAGGGGTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGAGGCTCACTCGGTCCCTaGCCTGTGCAGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRGSLGP*PVQGAG
Trigger: ACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCC...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGGTGGCCCCTGTACCTaGCCTGCCGAGGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVGGPCT*PAEAAG
Trigger: ACCTGCAGCCTCGGCAGGGCAGGTACAGGGGCCACC...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp ACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGCTGCCAGCACTGCCGTTGGGTaGTGCAGGCTCCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: TVSVRMCTNVPLGTSVAASTAVG*CRLLGL
Trigger: GAGCCCAAGGAGCCTGCACCACCCAACGGCAGTGCT...GGCAGCTACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGTCCTTGTCTCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACACAACACGCCAAGTCCTaGACCCGTGAGGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: GSLSREKRVCPVSLLPGTQHAKS*TREAVG
Trigger: ACCCACAGCCTCACGGGTCCAGGACTTGGCGTGTTG...TGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGAGACAAGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGGGCGTGGTGACGGGTaGGGGCCCCTGTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVGRGDG*GPLSLF
Trigger: AAAGAGGGACAGGGGCCCCCACCCGTCACCACGCCC...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTCCATTGTCCACTGGTTaGGCCCACACAGGGCATAGG +
Preference number: 4 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCPLSTG*AHTGHR
Trigger: CCTATGCCCTGTGTGGGCCCAACCAGTGGACAATGG...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGGCTCCCATCCGAGGTaGCCCCTGTACCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVGSHPR*PLYLPC
Trigger: GCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCC...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp TCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGATGGCTGCCTTCATCATaGGGGAGCCGTCAACCGTCC +
Preference number: 4 (lower is better)
Translates to: SLGQGPSWGLVVQSQRVRWLPSS*GSRQPS
Trigger: GGACGGTTGACGGCTCCCCCATGATGAAGGCAGCCA...TCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338448.10
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTGTGCCGTCCACAGCATaGACCACTTTGGTCTCGTCC +
Preference number: 4 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCVPSTA*TTLVSS
Trigger: GGACGAGACCAAAGTGGTCCATGCTGTGGACGGCAC...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338448.10
ENST00000592155.5
CDS-3UTR TCA 90 bp CTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGGCCGTGATGGTATCTTaGAGGCCCAGCACCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LGQGPSWGLVVQSQRVRRAVMVS*RPSTFL
Trigger: CAAGAAGGTGCTGGGCCTTCAAGATACCATCACGGC...CCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp CACCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGAGCCGTGATGGTATCTTaGAGGCCCAGCACCTTCTTG +
Preference number: 4 (lower is better)
Translates to: HPRPLAPKEARPHPNCLRAVMVS*RPSTFL
Trigger: CAAGAAGGTGCTGGGCCTTCAAGATACCATCACGGC...TCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp TCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGAGGGGGCCGGCTCACATaGTGGAGCAGCATTTACAAC +
Preference number: 4 (lower is better)
Translates to: SLGQGPSWGLVVQSQRVRGGRLT*WSSIYN
Trigger: GTTGTAAATGCTGCTCCATCATGTGAGCCGGCCCCC...TCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTACTGGCAGGTGGGGCCTaGTCTCGGGGTATGGTTGGG +
Preference number: 4 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVLAGGA*SRGMVG
Trigger: CCCAACCATACCCCGAGATCAGGCCCCACCTGCCAG...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp CTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGTCCAAGCAGGATGGAGAAGATCGTCGTCCTGCATCTaGCTCCTCAGGTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: LGVWLGRPRTLVQAGWRRSSSCI*LLRSSS
Trigger: GGATGAGGACCTGAGGAGGCAGATGCAGGACGACGA...TCTTCTCCATCCTGCTTGGACCAGGGTCCTGGGTCTTCCCAACCATACCCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp TCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTTCGTCGTCCTGCATCTaGCTCCTCAGGTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: SGKAGLSCLSPTRHKCTASSSCI*LLRSSS
Trigger: GGATGAGGACCTGAGGAGGCAGATGCAGGACGACGA...AGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp TCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGATTCTGCTCGTCGTCCTaGATCTGCCTCCTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SLGQGPSWGLVVQSQRVRFCSSS*ICLLRS
Trigger: GGACCTGAGGAGGCAGATGCAGGACGACGAGCAGAA...TCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp CACGCTGTTTATTTGCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACCCCGGCCGTGGACCCTaGCTCGCTCAGCGTGACCTC +
Preference number: 4 (lower is better)
Translates to: HAVYLLLWENQEHRGPRHPGRGP*LAQRDL
Trigger: GAGGTCACGCTGAGCGAGGCAGGGTCCACGGCCGGG...GTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGCAAATAAACAGCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGATCGCCTGGCTGTGCCTaGACACCGGTGATCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRSPGCA*TPVISR
Trigger: GCGGGAGATCACCGGTGTGCAGGCACAGCCAGGCGA...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTATCGCCTGGCTGTGCCTaGACACCGGTGATCTCCCGC +
Preference number: 4 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVSPGCA*TPVISR
Trigger: GCGGGAGATCACCGGTGTGCAGGCACAGCCAGGCGA...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp ACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGCTGCCAGACTCGCTTGTCTTTaGGCGTGCCCACCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: TVSVRMCTNVPLGTSVAARLACL*ACPPAS
Trigger: AGACGCCGGTGGGCACGCCCAAAGACAAGCGAGTCT...GGCAGCTACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGAGAGGAGCTCAGGGGGTaGATCCCGTTCTCGGCGGTG +
Preference number: 4 (lower is better)
Translates to: ASLGKSRTSGASSHTRSREELRG*IPFSAV
Trigger: CACCGCCGAGAACGGGATCCACCCCCTGAGCTCCTC...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp ACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGCTGCCGAAGCTGCCGTGACATaGGGGGTCCTTGTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: TVSVRMCTNVPLGTSVAAEAAVT*GVLVSG
Trigger: TCCCGAGACAAGGACCCCCCATGTCACGGCAGCTTC...GGCAGCTACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCTGGCCATTGTCCACTGGTTaGGCCCACACAGGGCATAGG +
Preference number: 4 (lower is better)
Translates to: EKRVCPVSLLPGTSARLWPLSTG*AHTGHR
Trigger: CCTATGCCCTGTGTGGGCCCAACCAGTGGACAATGG...CCAGAGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGCAGGTCAATGACCCCTaGTTCGCCCCGTCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: LGQGPSWGLVVQSQRVRRQVNDP*FAPSRR
Trigger: TCTTCTAGACGGGGCGAACCAGGGGTCATTGACCTG...CCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTGAAGACCCAGGACCCTaGTCCAAGCAGGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCEDPGP*SKQDGE
Trigger: TTCTCCATCCTGCTTGGACCAGGGTCCTGGGTCTTC...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCACCTGATCTCGGGGTATaGTTGGGAAGACCCAGGACC +
Preference number: 4 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSPDLGV*LGRPRT
Trigger: GGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGG...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGTCCTTGTCTCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAGGGGCAGGCTCACATTaGTCTGGGTGGCAAATGAGG +
Preference number: 4 (lower is better)
Translates to: GSLSREKRVCPVSLLPGTGAGSH*SGWQMR
Trigger: CCTCATTTGCCACCCAGACCAATGTGAGCCTGCCCC...TGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGAGACAAGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCAGTGCCGTCCACAGCATaGACCACTTTGGTCTCGTCC +
Preference number: 4 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSVPSTA*TTLVSS
Trigger: GGACGAGACCAAAGTGGTCCATGCTGTGGACGGCAC...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338448.10
ENST00000592155.5
CDS-3UTR TCA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTACTGCCTCGCTCAGCGTaGCCTCGTCCGCTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVLPRSA*PRPLCG
Trigger: TCCACAAAGCGGACGAGGTCACGCTGAGCGAGGCAG...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTGCCGTGATGGTATCTTaGAGGCCCAGCACCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PKTFSPQRGTASPQLPEIAVMVS*RPSTFL
Trigger: CAAGAAGGTGCTGGGCCTTCAAGATACCATCACGGC...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp TCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGAGCCGTGATGGTATCTTaGAGGCCCAGCACCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SLGQGPSWGLVVQSQRVRAVMVS*RPSTFL
Trigger: CAAGAAGGTGCTGGGCCTTCAAGATACCATCACGGC...TCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp CACCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGAGTGAGACGGTGTCTGTaGGAATGTGCACGAATGTGC +
Preference number: 4 (lower is better)
Translates to: HPRPLAPKEARPHPNCLRVRRCL*ECARMC
Trigger: GCACATTCGTGCACATTCTCACAGACACCGTCTCAC...TCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGAGCCTTGGACTTCAGGTaGTGCAGCTGCCTCCGCTCG +
Preference number: 4 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRALDFR*CSCLRS
Trigger: CGAGCGGAGGCAGCTGCAGCACCTGAAGTCCAAGGC...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTATCCCGTTCTCGGCGGTaGCGTCCACAGCATGGACCA +
Preference number: 4 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVSRSRR*RPQHGP
Trigger: TGGTCCATGCTGTGGACGGCACCGCCGAGAACGGGA...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp CACCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGACAAATGAGGGTCTCCTaGTCCAACCCAAGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: HPRPLAPKEARPHPNCLRQMRVS*SNPRGF
Trigger: GAAGCCTCTTGGGTTGGAGCAGGAGACCCTCATTTG...TCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTGTGTCTGTGAGAATGTaGACGAATGTGCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCVSVRM*TNVPLG
Trigger: CCCCAGAGGCACATTCGTGCACATTCTCACAGACAC...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp CTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGGTGTCTGTGAGAATGTaGACGAATGTGCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LGQGPSWGLVVQSQRVRRVSVRM*TNVPLG
Trigger: CCCCAGAGGCACATTCGTGCACATTCTCACAGACAC...CCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTACCTCGTCCGCTTTGTaGATGAGTTCGTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: PKTFSPQRGTASPQLPEITSSAL*MSSSTS
Trigger: CGAGGTGGACGAACTCATCCACAAAGCGGACGAGGT...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GGGTCCTTGTCTCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAGAAGACCCAGGACCCTaGTCCAAGCAGGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: GSLSREKRVCPVSLLPGTEDPGP*SKQDGE
Trigger: TTCTCCATCCTGCTTGGACCAGGGTCCTGGGTCTTC...TGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGAGACAAGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp ACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGCTGCCGGGGCAGGCTCACATTaGTCTGGGTGGCAAATGAGG +
Preference number: 4 (lower is better)
Translates to: TVSVRMCTNVPLGTSVAAGAGSH*SGWQMR
Trigger: CCTCATTTGCCACCCAGACCAATGTGAGCCTGCCCC...GGCAGCTACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCAGACCAAGTTGGGGCCTaGTTGTCCAAAGCCAACGTG +
Preference number: 4 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSDQVGA*LSKANV
Trigger: CACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTC...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp TCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGAGACCAAGTTGGGGCCTaGTTGTCCAAAGCCAACGTG +
Preference number: 4 (lower is better)
Translates to: SLGQGPSWGLVVQSQRVRDQVGA*LSKANV
Trigger: CACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTC...TCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGACTGGACCAGGAGGTaGCCTGAGCACTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVDWTRR*PEHWAP
Trigger: TGGTGCCCAGTGCTCAGGCCACCTCCTGGTCCAGTC...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CACGCTGTTTATTTGCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACGGCTCCCATCCGAGGTaGCCCCTGTACCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: HAVYLLLWENQEHRGPRHGSHPR*PLYLPC
Trigger: GCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCC...GTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGCAAATAAACAGCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTACGTCCGCTTTGTGGATaGGTTCGTCCACCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVRPLCG*VRPPRR
Trigger: CCTCCGAGGTGGACGAACTCATCCACAAAGCGGACG...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTGTGAGACGGTGTCTGTaGGAATGTGCACGAATGTGC +
Preference number: 4 (lower is better)
Translates to: PKTFSPQRGTASPQLPEIVRRCL*ECARMC
Trigger: GCACATTCGTGCACATTCTCACAGACACCGTCTCAC...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp CTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGTCCAAGCAGGATGGAGAAGAGTGAGACGGTGTCTGTaGGAATGTGCACGAATGTGC +
Preference number: 4 (lower is better)
Translates to: LGVWLGRPRTLVQAGWRRVRRCL*ECARMC
Trigger: GCACATTCGTGCACATTCTCACAGACACCGTCTCAC...TCTTCTCCATCCTGCTTGGACCAGGGTCCTGGGTCTTCCCAACCATACCCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTTCCAAAGCCAACGTGTaGGACGGTGTCTGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCSKANV*DGVCEN
Trigger: ATTCTCACAGACACCGTCTCACACGTTGGCTTTGGA...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGTGTCCTTCTCCACAGTaGTCTCAACCGAGTACATGG +
Preference number: 4 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCECPSPQ*SQPSTW
Trigger: CCATGTACTCGGTTGAGATCACTGTGGAGAAGGACA...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338448.10
ENST00000592155.5
CDS-3UTR CCA 90 bp CACGCTGTTTATTTGCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACCGGCAGCACTGCCGTTaGGTGGTGCAGGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: HAVYLLLWENQEHRGPRHRQHCR*VVQAPW
Trigger: CCAAGGAGCCTGCACCACCCAACGGCAGTGCTGCCG...GTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGCAAATAAACAGCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp ACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGCTGCCCAGGTCAATGACCCCTaGTTCGCCCCGTCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: TVSVRMCTNVPLGTSVAAQVNDP*FAPSRR
Trigger: TCTTCTAGACGGGGCGAACCAGGGGTCATTGACCTG...GGCAGCTACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CACGCTGTTTATTTGCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACGCTCGGGACAAGGAGTaGCTCACTCGGTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: HAVYLLLWENQEHRGPRHARDKE*LTRSLP
Trigger: GGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGC...GTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGCAAATAAACAGCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGTCCAAGCAGGATGGAGAAGATCACATTGGTCTGGGTaGCAAATGAGGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LGVWLGRPRTLVQAGWRRSHWSG*QMRVSC
Trigger: GCAGGAGACCCTCATTTGCCACCCAGACCAATGTGA...TCTTCTCCATCCTGCTTGGACCAGGGTCCTGGGTCTTCCCAACCATACCCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTTCACATTGGTCTGGGTaGCAAATGAGGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PKTFSPQRGTASPQLPEISHWSG*QMRVSC
Trigger: GCAGGAGACCCTCATTTGCCACCCAGACCAATGTGA...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCAAGGCTCACATTGGTCTaGGTGGCAAATGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSRLTLV*VANEGL
Trigger: GAGACCCTCATTTGCCACCCAGACCAATGTGAGCCT...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGCAGCATGGACCACTTTaGTCTCGTCCTCGTAGACTT +
Preference number: 4 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCEQHGPL*SRPRRL
Trigger: AAGTCTACGAGGACGAGACCAAAGTGGTCCATGCTG...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338448.10
ENST00000592155.5
CDS-3UTR CCA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTTCCTCAGGGGCGTGTTaGAGACTCGCTTGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: PKTFSPQRGTASPQLPEISSGAC*RLACSS
Trigger: TGAACTACAAGCGAGTCTCCAACACGCCCCTGAGGA...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp CTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGTCCAAGCAGGATGGAGAAGATCCAAAGCCAACGTGTaGGACGGTGTCTGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: LGVWLGRPRTLVQAGWRRSKANV*DGVCEN
Trigger: ATTCTCACAGACACCGTCTCACACGTTGGCTTTGGA...TCTTCTCCATCCTGCTTGGACCAGGGTCCTGGGTCTTCCCAACCATACCCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTCTGGTCCAAAGCCAACGTGTaGGACGGTGTCTGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: EKRVCPVSLLPGTSARLWSKANV*DGVCEN
Trigger: ATTCTCACAGACACCGTCTCACACGTTGGCTTTGGA...CCAGAGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTTCCAAAGCCAACGTGTaGGACGGTGTCTGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: PKTFSPQRGTASPQLPEISKANV*DGVCEN
Trigger: ATTCTCACAGACACCGTCTCACACGTTGGCTTTGGA...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp CACGCTGTTTATTTGCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACCCAGCGCTCCCGCAGTaGCTTGGACTTCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: HAVYLLLWENQEHRGPRHPALPQ*LGLQVL
Trigger: CAGCACCTGAAGTCCAAGGCACTGCGGGAGCGCTGG...GTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGCAAATAAACAGCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGATTCTGCTCGTCGTCCTaGATCTGCCTCCTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRFCSSS*ICLLRS
Trigger: GGACCTGAGGAGGCAGATGCAGGACGACGAGCAGAA...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR GCA 90 bp CACGCTGTTTATTTGCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACTCCCGTTCTCGGCGGTaGCGTCCACAGCATGGACCA +
Preference number: 4 (lower is better)
Translates to: HAVYLLLWENQEHRGPRHSRSRR*RPQHGP
Trigger: TGGTCCATGCTGTGGACGGCACCGCCGAGAACGGGA...GTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGCAAATAAACAGCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTCAGCATTTACAACGGTaGTTCTTCATGTCGAGGTCC +
Preference number: 4 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCQHLQR*FFMSRS
Trigger: GGACCTCGACATGAAGAAGCACCGTTGTAAATGCTG...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp CACGCTGTTTATTTGCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACTCGGTCCCTGCCCTGTaGAGGGGGCAGGTCAATGAC +
Preference number: 4 (lower is better)
Translates to: HAVYLLLWENQEHRGPRHSVPAL*RGQVND
Trigger: GTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGA...GTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGCAAATAAACAGCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp ACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGCTGCCTCTCAACCGAGTACATaGCTGCCTTCATCATGGGGG +
Preference number: 4 (lower is better)
Translates to: TVSVRMCTNVPLGTSVAASQPST*LPSSWG
Trigger: CCCCCATGATGAAGGCAGCCATGTACTCGGTTGAGA...GGCAGCTACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338448.10
ENST00000592155.5
CDS-3UTR TCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGACACCGGCGTCTGCTGTaGATTCATCACCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRHRRLL*IHHHLC
Trigger: ACAGAGGTGGTGATGAATTCACAGCAGACGCCGGTG...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR TCA 90 bp CACGCTGTTTATTTGCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACCCACCAGCTCCGCCGTaGTGGTATCTTGAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: HAVYLLLWENQEHRGPRHPPAPP*WYLEGP
Trigger: TGGGCCTTCAAGATACCATCACGGCGGAGCTGGTGG...GTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGCAAATAAACAGCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp GGGTCCTTGTCTCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACACAGCATTTACAACGGTaGTTCTTCATGTCGAGGTCC +
Preference number: 4 (lower is better)
Translates to: GSLSREKRVCPVSLLPGTQHLQR*FFMSRS
Trigger: GGACCTCGACATGAAGAAGCACCGTTGTAAATGCTG...TGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGAGACAAGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTATCCTCAGGGGCGTGTTaGAGACTCGCTTGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVSSGAC*RLACLW
Trigger: CCAAAGACAAGCGAGTCTCCAACACGCCCCTGAGGA...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGAACCTCGTCCGCTTTGTaGATGAGTTCGTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRTSSAL*MSSSTS
Trigger: CGAGGTGGACGAACTCATCCACAAAGCGGACGAGGT...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAACCTCGTCCGCTTTGTaGATGAGTTCGTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVTSSAL*MSSSTS
Trigger: CGAGGTGGACGAACTCATCCACAAAGCGGACGAGGT...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGACCAAGTTGGGGCCTaGTTGTCCAAAGCCAACGTG +
Preference number: 4 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVDQVGA*LSKANV
Trigger: CACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTC...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CACGCTGTTTATTTGCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACCCTGATCTCGGGGTATaGTTGGGAAGACCCAGGACC +
Preference number: 4 (lower is better)
Translates to: HAVYLLLWENQEHRGPRHPDLGV*LGRPRT
Trigger: GGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGG...GTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGCAAATAAACAGCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAAGGCTCACATTGGTCTaGGTGGCAAATGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVRLTLV*VANEGL
Trigger: GAGACCCTCATTTGCCACCCAGACCAATGTGAGCCT...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR TCA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGATGTCCTTCTCCACAGTaGTCTCAACCGAGTACATGG +
Preference number: 4 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRCPSPQ*SQPSTW
Trigger: CCATGTACTCGGTTGAGATCACTGTGGAGAAGGACA...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338448.10
ENST00000592155.5
CDS-3UTR CCA 90 bp CACGCTGTTTATTTGCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACGTGCCGTCCACAGCATaGACCACTGCCTTCATCATG +
Preference number: 4 (lower is better)
Translates to: HAVYLLLWENQEHRGPRHVPSTA*TTAFIM
Trigger: CATGATGAAGGCAGTGGTCCATGCTGTGGACGGCAC...GTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGCAAATAAACAGCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000590161.2
CDS-3UTR CCA 90 bp CACGCTGTTTATTTGCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACGACCAAGTTGGGGCCTaGTTGTCCAAAGCCAACGTG +
Preference number: 4 (lower is better)
Translates to: HAVYLLLWENQEHRGPRHDQVGA*LSKANV
Trigger: CACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTC...GTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGCAAATAAACAGCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTACAGCATGGACCACTTTaGTCTCGTCCTCGTAGACTT +
Preference number: 4 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVQHGPL*SRPRRL
Trigger: AAGTCTACGAGGACGAGACCAAAGTGGTCCATGCTG...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338448.10
ENST00000592155.5
CDS-3UTR GCA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTACAGCATTTACAACGGTaGTTCTTCATGTCGAGGTCC +
Preference number: 4 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVQHLQR*FFMSRS
Trigger: GGACCTCGACATGAAGAAGCACCGTTGTAAATGCTG...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR GCA 90 bp CACGCTGTTTATTTGCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACCAAATGAGGGTCTCCTaGTCCAACCCAAGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: HAVYLLLWENQEHRGPRHQMRVS*SNPRGF
Trigger: GAAGCCTCTTGGGTTGGAGCAGGAGACCCTCATTTG...GTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGCAAATAAACAGCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CACGCTGTTTATTTGCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACTCACATTGGTCTGGGTaGCAAATGAGGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HAVYLLLWENQEHRGPRHSHWSG*QMRVSC
Trigger: GCAGGAGACCCTCATTTGCCACCCAGACCAATGTGA...GTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGCAAATAAACAGCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CACGCTGTTTATTTGCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACAGGCTCACATTGGTCTaGGTGGCAAATGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: HAVYLLLWENQEHRGPRHRLTLV*VANEGL
Trigger: GAGACCCTCATTTGCCACCCAGACCAATGTGAGCCT...GTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGCAAATAAACAGCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CCA 90 bp CACGCTGTTTATTTGCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACTCTCAACCGAGTACATaGCTGCCTTCATCATGGGGG +
Preference number: 4 (lower is better)
Translates to: HAVYLLLWENQEHRGPRHSQPST*LPSSWG
Trigger: CCCCCATGATGAAGGCAGCCATGTACTCGGTTGAGA...GTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGCAAATAAACAGCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338448.10
ENST00000592155.5
CDS GCA 90 bp GCCGGGCTGGATCCCCGGCGGGCCGGACGTGGCCTCGCCTGGCTGTaGCTGCACACCGGTGATCTCCCGCCGGGAGGGCGTGGTCCGGGC +
Preference number: 5 (lower is better)
Translates to: AGLDPRRAGRGLAWL*LHTGDLPPGGRGPG
Trigger: GCCCGGACCACGCCCTCCCGGCGGGAGATCACCGGTGTGCAGGCACAGCCAGGCGAGGCCACGTCCGGCCCGCCGGGGATCCAGCCCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS GCA 90 bp GGCTGGATCCCCGGCGGGCCGGACGTGGCCTCGCCTGGCTGTGCCTaGACACCGGTGATCTCCCGCCGGGAGGGCGTGGTCCGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GWIPGGPDVASPGCA*TPVISRREGVVRAA
Trigger: GGCAGCCCGGACCACGCCCTCCCGGCGGGAGATCACCGGTGTGCAGGCACAGCCAGGCGAGGCCACGTCCGGCCCGCCGGGGATCCAGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS CCA 90 bp CTCCTGGCCGGGCTGGATCCCCGGCGGGCCGGACGTGGCCTCGCCTaGCTGTGCCTGCACACCGGTGATCTCCCGCCGGGAGGGCGTGGT +
Preference number: 5 (lower is better)
Translates to: LLAGLDPRRAGRGLA*LCLHTGDLPPGGRG
Trigger: ACCACGCCCTCCCGGCGGGAGATCACCGGTGTGCAGGCACAGCCAGGCGAGGCCACGTCCGGCCCGCCGGGGATCCAGCCCGGCCAGGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS CCA 90 bp CCCAGCGAGCAGGGCGGGCCCTGTCCGAGGCGGGAGGGGCGTGTGTaGGATGGGGGCGTCGCACTCGTCCTTCCAGAACCCACGCCCGGG +
Preference number: 5 (lower is better)
Translates to: PSEQGGPCPRREGRV*DGGVALVLPEPTPG
Trigger: CCCGGGCGTGGGTTCTGGAAGGACGAGTGCGACGCCCCCATCCCACACACGCCCCTCCCGCCTCGGACAGGGCCCGCCCTGCTCGCTGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586055.2
CDS CCA 90 bp CGAGCAGGGCGGGCCCTGTCCGAGGCGGGAGGGGCGTGTGTGGGATaGGGGCGTCGCACTCGTCCTTCCAGAACCCACGCCCGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: RAGRALSEAGGACVG*GRRTRPSRTHARAA
Trigger: AGCTGCCCGGGCGTGGGTTCTGGAAGGACGAGTGCGACGCCCCCATCCCACACACGCCCCTCCCGCCTCGGACAGGGCCCGCCCTGCTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586055.2
CDS CCA 90 bp GGGGGTCGCTGGTGGTGGCCTCGGGCCCCGCCTGATTCTCTTCCCTaGAGGCGGCCTCCGTGGGAGGCTCGGCAGCACTGCCGTTGGGTG +
Preference number: 5 (lower is better)
Translates to: GGRWWWPRAPPDSLP*RRPPWEARQHCRWV
Trigger: CACCCAACGGCAGTGCTGCCGAGCCTCCCACGGAGGCCGCCTCCAGGGAAGAGAATCAGGCGGGGCCCGAGGCCACCACCAGCGACCCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS-3UTR CAA 90 bp GGGGGCGGGAGCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGCCGCCGCGTTCTCCTaGGCAGTGGCTGGGGCGGAG +
Preference number: 5 (lower is better)
Translates to: GGGSSGQGVAHSVPALCRAAAFS*AVAGAE
Trigger: CTCCGCCCCAGCCACTGCCAAGGAGAACGCGGCGGC...CCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGCTCCCGCCCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS TCA 90 bp ATGTCGAGGTCCTGGGGGTCGCTGGTGGTGGCCTCGGGCCCCGCCTaGTTCTCTTCCCTGGAGGCGGCCTCCGTGGGAGGCTCGGCAGCA +
Preference number: 5 (lower is better)
Translates to: MSRSWGSLVVASGPA*FSSLEAASVGGSAA
Trigger: TGCTGCCGAGCCTCCCACGGAGGCCGCCTCCAGGGAAGAGAATCAGGCGGGGCCCGAGGCCACCACCAGCGACCCCCAGGACCTCGACAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS GCA 90 bp CTTCTCTGCGATGGCCTGCAGCCGCTCCTGCTGGGACGTGGTCTCTaGCGCCAGGACCTCCATCTCCCCGCCGAGGTCCGGGTGGGTCCG +
Preference number: 5 (lower is better)
Translates to: LLCDGLQPLLLGRGL*RQDLHLPAEVRVGP
Trigger: CGGACCCACCCGGACCTCGGCGGGGAGATGGAGGTCCTGGCGGCAGAGACCACGTCCCAGCAGGAGCGGCTGCAGGCCATCGCAGAGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000592870.5
CDS GCA 90 bp TCCGCCTGCCGCTTCCGCTTCTCTGCGATGGCCTGCAGCCGCTCCTaGTGGGACGTGGTCTCTGCCGCCAGGACCTCCATCTCCCCGCCG +
Preference number: 5 (lower is better)
Translates to: SACRFRFSAMACSRS*WDVVSAARTSISPP
Trigger: CGGCGGGGAGATGGAGGTCCTGGCGGCAGAGACCACGTCCCAGCAGGAGCGGCTGCAGGCCATCGCAGAGAAGCGGAAGCGGCAGGCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000589012.5
ENST00000592870.5
CDS CCA 90 bp GCCTGCCGCTTCCGCTTCTCTGCGATGGCCTGCAGCCGCTCCTGCTaGGACGTGGTCTCTGCCGCCAGGACCTCCATCTCCCCGCCGAGG +
Preference number: 5 (lower is better)
Translates to: ACRFRFSAMACSRSC*DVVSAARTSISPPR
Trigger: CCTCGGCGGGGAGATGGAGGTCCTGGCGGCAGAGACCACGTCCCAGCAGGAGCGGCTGCAGGCCATCGCAGAGAAGCGGAAGCGGCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000589012.5
ENST00000592870.5
CDS CCA 90 bp TGGCCTCGGGCCCCGCCTGATTCTCTTCCCTGGAGGCGGCCTCCGTaGGAGGCTCGGCAGCACTGCCGTTGGGTGGTGCAGGCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: WPRAPPDSLPWRRPP*EARQHCRWVVQAPW
Trigger: CCAAGGAGCCTGCACCACCCAACGGCAGTGCTGCCGAGCCTCCCACGGAGGCCGCCTCCAGGGAAGAGAATCAGGCGGGGCCCGAGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS CCA 90 bp CGACGGGAGCCCCGCAGAGGCCTCCGCGGTGCGGGGCGTTGGTGTTaGAAGGGCCCAGAGAGGTTACGCAACGGCCAAGGTCACCCAGCG +
Preference number: 5 (lower is better)
Translates to: RREPRRGLRGAGRWC*KGPERLRNGQGHPA
Trigger: CGCTGGGTGACCTTGGCCGTTGCGTAACCTCTCTGGGCCCTTCCAACACCAACGCCCCGCACCGCGGAGGCCTCTGCGGGGCTCCCGTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586055.2
CDS CCA 90 bp GCCAGGACCATGCTGGGCGGAGGAGCTGAGTCCCGGGCAAAGGCGTaGAAAAGCTCAGGGCGGCGGCGGTCCTGGTGCTGCTGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: ARTMLGGGAESRAKA*KSSGRRRSWCCWGS
Trigger: GGACCCCCAGCAGCACCAGGACCGCCGCCGCCCTGAGCTTTTCCACGCCTTTGCCCGGGACTCAGCTCCTCCGCCCAGCATGGTCCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586055.2
CDS GCA 90 bp GGAGGCGGCCTCCGTGGGAGGCTCGGCAGCACTGCCGTTGGGTGGTaGAGGCTCCTTGGGCTCAGCCGCGTCTTCGATGACCACCAGCTC +
Preference number: 5 (lower is better)
Translates to: GGGLRGRLGSTAVGW*RLLGLSRVFDDHQL
Trigger: GAGCTGGTGGTCATCGAAGACGCGGCTGAGCCCAAGGAGCCTGCACCACCCAACGGCAGTGCTGCCGAGCCTCCCACGGAGGCCGCCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS CCA 90 bp GCTTCCGCTTCTCTGCGATGGCCTGCAGCCGCTCCTGCTGGGACGTaGTCTCTGCCGCCAGGACCTCCATCTCCCCGCCGAGGTCCGGGT +
Preference number: 5 (lower is better)
Translates to: ASASLRWPAAAPAGT*SLPPGPPSPRRGPG
Trigger: ACCCGGACCTCGGCGGGGAGATGGAGGTCCTGGCGGCAGAGACCACGTCCCAGCAGGAGCGGCTGCAGGCCATCGCAGAGAAGCGGAAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000592870.5
CDS CCA 90 bp CCTGGAGGCGGCCTCCGTGGGAGGCTCGGCAGCACTGCCGTTGGGTaGTGCAGGCTCCTTGGGCTCAGCCGCGTCTTCGATGACCACCAG +
Preference number: 5 (lower is better)
Translates to: PGGGLRGRLGSTAVG*CRLLGLSRVFDDHQ
Trigger: CTGGTGGTCATCGAAGACGCGGCTGAGCCCAAGGAGCCTGCACCACCCAACGGCAGTGCTGCCGAGCCTCCCACGGAGGCCGCCTCCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS CCA 90 bp CAAACCCGACGGGAGCCCCGCAGAGGCCTCCGCGGTGCGGGGCGTTaGTGTTGGAAGGGCCCAGAGAGGTTACGCAACGGCCAAGGTCAC +
Preference number: 5 (lower is better)
Translates to: QTRREPRRGLRGAGR*CWKGPERLRNGQGH
Trigger: GTGACCTTGGCCGTTGCGTAACCTCTCTGGGCCCTTCCAACACCAACGCCCCGCACCGCGGAGGCCTCTGCGGGGCTCCCGTCGGGTTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586055.2
CDS-3UTR CAA 90 bp GCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAGTCTTGCGCTCCTCCTaGGCTGGACTCGGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: ARDKEWLTRSLPCAGGRSVLRSS*AGLGAG
Trigger: CCCAGCCCCGAGTCCAGCCAAGGAGGAGCGCAAGAC...TGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CAA 90 bp GCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAATGACCCCTGGTTCGCCGGTGGTGCAGGCTCCTaGGGCTCAGCCGCGTCTTCG +
Preference number: 5 (lower is better)
Translates to: AHSVPALCRGQVNDPWFAGGAGS*GSAASS
Trigger: CGAAGACGCGGCTGAGCCCAAGGAGCCTGCACCACC...GGCGAACCAGGGGTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp GGCAGGGACCCAGGCTCCCATCCGAGGTGGCCCCTGTACCTGCCCTGCCGAGGCCAGGAGGGAAGCCCCTaGCCACTTCCAATGAGAGGG +
Preference number: 5 (lower is better)
Translates to: GRDPGSHPRWPLYLPCRGQEGSP*PLPMRG
Trigger: CCCTCTCATTGGAAGTGGCAAGGGGCTTCCCTCCTG...GCCTCGGCAGGGCAGGTACAGGGGCCACCTCGGATGGGAGCCTGGGTCCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS GCA 90 bp GATTCTCTTCCCTGGAGGCGGCCTCCGTGGGAGGCTCGGCAGCACTaGCGTTGGGTGGTGCAGGCTCCTTGGGCTCAGCCGCGTCTTCGA +
Preference number: 5 (lower is better)
Translates to: DSLPWRRPPWEARQH*RWVVQAPWAQPRLR
Trigger: TCGAAGACGCGGCTGAGCCCAAGGAGCCTGCACCACCCAACGGCAGTGCTGCCGAGCCTCCCACGGAGGCCGCCTCCAGGGAAGAGAATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS CCA 90 bp GGCCCGGACTGGGCTCGGGGCCGCCGCGTTCTCCTTGGCAGTGGCTaGGGCGGAGTCTCCACGCTCCAGCACCTCAATTTCCTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: GPDWARGRRVLLGSG*GGVSTLQHLNFLLQ
Trigger: TTGGAGAAGGAAATTGAGGTGCTGGAGCGTGGAGACTCCGCCCCAGCCACTGCCAAGGAGAACGCGGCGGCCCCGAGCCCAGTCCGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000589012.5
ENST00000592870.5
ENST00000593172.5
ENST00000633534.1
CDS CCA 90 bp CCGGCCGTGGACCCTGCCTCGCTCAGCGTGACCTCGTCCGCTTTGTaGATGAGTTCGTCCACCTCGGAGGAGCTCAGGGGGTGGATCCCG +
Preference number: 5 (lower is better)
Translates to: PAVDPASLSVTSSAL*MSSSTSEELRGWIP
Trigger: CGGGATCCACCCCCTGAGCTCCTCCGAGGTGGACGAACTCATCCACAAAGCGGACGAGGTCACGCTGAGCGAGGCAGGGTCCACGGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS-3UTR CAA 90 bp GCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCATCGGCAGCACTGCCGTaGGGTGGTGCAGGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ARDKEWLTRSLPCAGGRSSAALP*GGAGSL
Trigger: CAAGGAGCCTGCACCACCCAACGGCAGTGCTGCCGA...TGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS GCA 90 bp CGTCCACCTCGGAGGAGCTCAGGGGGTGGATCCCGTTCTCGGCGGTaGCGTCCACAGCATGGACCACTGCCTTCATCATGGGGGAGCCGT +
Preference number: 5 (lower is better)
Translates to: RPPRRSSGGGSRSRR*RPQHGPLPSSWGSR
Trigger: ACGGCTCCCCCATGATGAAGGCAGTGGTCCATGCTGTGGACGGCACCGCCGAGAACGGGATCCACCCCCTGAGCTCCTCCGAGGTGGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264560.11
ENST00000590161.2
ENST00000633534.1
CDS CCA 90 bp TACAACGGTGCTTCTTCATGTCGAGGTCCTGGGGGTCGCTGGTGGTaGCCTCGGGCCCCGCCTGATTCTCTTCCCTGGAGGCGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: YNGASSCRGPGGRWW*PRAPPDSLPWRRPP
Trigger: CGGAGGCCGCCTCCAGGGAAGAGAATCAGGCGGGGCCCGAGGCCACCACCAGCGACCCCCAGGACCTCGACATGAAGAAGCACCGTTGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS TCA 90 bp TCGTCTGGAGCGCGTGAGATAGTCCTGCTCCAGGAGATGAGTTCATaGGGCCCAAACCCGACGGGAGCCCCGCAGAGGCCTCCGCGGTGC +
Preference number: 5 (lower is better)
Translates to: SSGAREIVLLQEMSS*GPNPTGAPQRPPRC
Trigger: GCACCGCGGAGGCCTCTGCGGGGCTCCCGTCGGGTTTGGGCCTCATGAACTCATCTCCTGGAGCAGGACTATCTCACGCGCTCCAGACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586055.2
CDS-3UTR CAA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTGCCGCCGCGTTCTCCTaGGCAGTGGCTGGGGCGGAG +
Preference number: 5 (lower is better)
Translates to: PKTFSPQRGTASPQLPEIAAAFS*AVAGAE
Trigger: CTCCGCCCCAGCCACTGCCAAGGAGAACGCGGCGGC...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CAA 90 bp GCTCGGGACAAGGAGTGGCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAGATCTCGGGGTATGGTaGGGAAGACCCAGGACCCTG +
Preference number: 5 (lower is better)
Translates to: ARDKEWLTRSLPCAGGRSDLGVW*GRPRTL
Trigger: CAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATC...TGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGCCACTCCTTGTCCCGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS GCA 90 bp CTGGACACCGAGTCCTCCAGCAGCCGTGTCTTCTGCTCGTCGTCCTaGATCTGCCTCCTCAGGTCCTCATCCCCCTCTGAGGCCGAGGAC +
Preference number: 5 (lower is better)
Translates to: LDTESSSSRVFCSSS*ICLLRSSSPSEAED
Trigger: GTCCTCGGCCTCAGAGGGGGATGAGGACCTGAGGAGGCAGATGCAGGACGACGAGCAGAAGACACGGCTGCTGGAGGACTCGGTGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000589012.5
ENST00000592870.5
CDS CCA 90 bp TCCGCTTTGTGGATGAGTTCGTCCACCTCGGAGGAGCTCAGGGGGTaGATCCCGTTCTCGGCGGTGCCGTCCACAGCATGGACCACTGCC +
Preference number: 5 (lower is better)
Translates to: SALWMSSSTSEELRG*IPFSAVPSTAWTTA
Trigger: GGCAGTGGTCCATGCTGTGGACGGCACCGCCGAGAACGGGATCCACCCCCTGAGCTCCTCCGAGGTGGACGAACTCATCCACAAAGCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264560.11
ENST00000590161.2
ENST00000633534.1
CDS-3UTR CAA 90 bp GGGCACTTCAGCGAAGGCTCGCGGCTCGAGGGACTCAGGCAGACTCCAGGGAGGGTCCTCAGGGGCGTGTaGGAGACTCGCTTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: GHFSEGSRLEGLRQTPGRVLRGV*ETRLSL
Trigger: CAAAGACAAGCGAGTCTCCAACACGCCCCTGAGGAC...CCTCCCTGGAGTCTGCCTGAGTCCCTCGAGCCGCGAGCCTTCGCTGAAGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CAA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGGGTGGTGCAGGCTCCTaGGGCTCAGCCGCGTCTTCG +
Preference number: 5 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCEGGAGS*GSAASS
Trigger: CGAAGACGCGGCTGAGCCCAAGGAGCCTGCACCACC...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTGGTGGTGCAGGCTCCTaGGGCTCAGCCGCGTCTTCG +
Preference number: 5 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCGGAGS*GSAASS
Trigger: CGAAGACGCGGCTGAGCCCAAGGAGCCTGCACCACC...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp CACCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGAGGTGGTGCAGGCTCCTaGGGCTCAGCCGCGTCTTCG +
Preference number: 5 (lower is better)
Translates to: HPRPLAPKEARPHPNCLRGGAGS*GSAASS
Trigger: CGAAGACGCGGCTGAGCCCAAGGAGCCTGCACCACC...TCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp GCTGGCAGGTGGGGCCTGATCTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGCAGGAGGGAAGCCCCTaGCCACTTCCAATGAGAGGG +
Preference number: 5 (lower is better)
Translates to: AGRWGLISGYGWEDPGPWQEGSP*PLPMRG
Trigger: CCCTCTCATTGGAAGTGGCAAGGGGCTTCCCTCCTG...CCAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGGCCCCACCTGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS TCA 90 bp TGCCGTCCACAGCATGGACCACTTTGGTCTCGTCCTCGTAGACTTTaGTGCCCAGAGGGAGCGGCTGCCGAGGGAGCAGCGTGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: CRPQHGPLWSRPRRL*CPEGAAAEGAAWCW
Trigger: CCAGCACCACGCTGCTCCCTCGGCAGCCGCTCCCTCTGGGCATCAAAGTCTACGAGGACGAGACCAAAGTGGTCCATGCTGTGGACGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338448.10
ENST00000587513.3
ENST00000592155.5
ENST00000593172.5
CDS GCA 90 bp CGTCCACCTCGGAGGAGCTCAGGGGGTGGATCCCGTTCTCGGCGGTaGCGTCCACAGCATGGACCACTTTGGTCTCGTCCTCGTAGACTT +
Preference number: 5 (lower is better)
Translates to: RPPRRSSGGGSRSRR*RPQHGPLWSRPRRL
Trigger: AAGTCTACGAGGACGAGACCAAAGTGGTCCATGCTGTGGACGGCACCGCCGAGAACGGGATCCACCCCCTGAGCTCCTCCGAGGTGGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338448.10
ENST00000587513.3
ENST00000592155.5
ENST00000593172.5
CDS CCA 90 bp ATTTACAACGGTGCTTCTTCATGTCGAGGTCCTGGGGGTCGCTGGTaGTGGCCTCGGGCCCCGCCTGATTCTCTTCCCTGGAGGCGGCCT +
Preference number: 5 (lower is better)
Translates to: IYNGASSCRGPGGRW*WPRAPPDSLPWRRP
Trigger: AGGCCGCCTCCAGGGAAGAGAATCAGGCGGGGCCCGAGGCCACCACCAGCGACCCCCAGGACCTCGACATGAAGAAGCACCGTTGTAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS CCA 90 bp AGCATTTACAACGGTGCTTCTTCATGTCGAGGTCCTGGGGGTCGCTaGTGGTGGCCTCGGGCCCCGCCTGATTCTCTTCCCTGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: SIYNGASSCRGPGGR*WWPRAPPDSLPWRR
Trigger: CCGCCTCCAGGGAAGAGAATCAGGCGGGGCCCGAGGCCACCACCAGCGACCCCCAGGACCTCGACATGAAGAAGCACCGTTGTAAATGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS-3UTR CAA 90 bp CACCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGAGAGACTCGCTTGTCTTaGGGCGTGCCCACCGGCGTC +
Preference number: 5 (lower is better)
Translates to: HPRPLAPKEARPHPNCLRETRLS*GVPTGV
Trigger: GACGCCGGTGGGCACGCCCAAAGACAAGCGAGTCTC...TCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CAA 90 bp GCTCACTCGGTCCCTGCCCTGTGCAGGGGGCAGGTCAATGACCCCTGGTTCGCCCGCCGTGATGGTATCTaGAAGGCCCAGCACCTTCTT +
Preference number: 5 (lower is better)
Translates to: AHSVPALCRGQVNDPWFARRDGI*KAQHLL
Trigger: AAGAAGGTGCTGGGCCTTCAAGATACCATCACGGCG...GGCGAACCAGGGGTCATTGACCTGCCCCCTGCACAGGGCAGGGACCGAGTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp CACCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATCGGCAGCACTGCCGTaGGGTGGTGCAGGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: HPRPLAPKEARPHPNCLRSAALP*GGAGSL
Trigger: CAAGGAGCCTGCACCACCCAACGGCAGTGCTGCCGA...TCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS CCA 90 bp TCCGCTTTGTGGATGAGTTCGTCCACCTCGGAGGAGCTCAGGGGGTaGATCCCGTTCTCGGCGGTGCCGTCCACAGCATGGACCACTTTG +
Preference number: 5 (lower is better)
Translates to: SALWMSSSTSEELRG*IPFSAVPSTAWTTL
Trigger: CAAAGTGGTCCATGCTGTGGACGGCACCGCCGAGAACGGGATCCACCCCCTGAGCTCCTCCGAGGTGGACGAACTCATCCACAAAGCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338448.10
ENST00000587513.3
ENST00000592155.5
ENST00000593172.5
CDS-3UTR CAA 90 bp CCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGATTCGCTCCCGCAGTGCCTaGGACTTCAGGTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PKTFSPQRGTASPQLPEIRSRSA*DFRCCS
Trigger: GCTGCAGCACCTGAAGTCCAAGGCACTGCGGGAGCG...AATCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CAA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGAGGCCCAGCACCTTCTaGGTCTCGGCCTCATCCTCC +
Preference number: 5 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCERPSTF*VSASSS
Trigger: GGAGGATGAGGCCGAGACCAAGAAGGTGCTGGGCCT...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp GCTGGCAGGTGGGGCCTGATCTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGCGCCGTGATGGTATCTaGAAGGCCCAGCACCTTCTT +
Preference number: 5 (lower is better)
Translates to: AGRWGLISGYGWEDPGPWRRDGI*KAQHLL
Trigger: AAGAAGGTGCTGGGCCTTCAAGATACCATCACGGCG...CCAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATCAGGCCCCACCTGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp TCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAAGTGCACGGCTTCGGCAGCACTGCCGTaGGGTGGTGCAGGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SGKAGLSCLSPTRHKCTASAALP*GGAGSL
Trigger: CAAGGAGCCTGCACCACCCAACGGCAGTGCTGCCGA...AGCCGTGCACTTGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp GGGTCCTTGTCTCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACATCGGCAGCACTGCCGTaGGGTGGTGCAGGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: GSLSREKRVCPVSLLPGTSAALP*GGAGSL
Trigger: CAAGGAGCCTGCACCACCCAACGGCAGTGCTGCCGA...TGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGAGACAAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGGATCTCGGGGTATGGTaGGGAAGACCCAGGACCCTG +
Preference number: 5 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCEDLGVW*GRPRTL
Trigger: CAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATC...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp CTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGGATCTCGGGGTATGGTaGGGAAGACCCAGGACCCTG +
Preference number: 5 (lower is better)
Translates to: LGQGPSWGLVVQSQRVRRDLGVW*GRPRTL
Trigger: CAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATC...CCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS TCA 90 bp TCAGCCGCGTCTTCGATGACCACCAGCTCCGCCGTGATGGTATCTTaGAGGCCCAGCACCTTCTTGGTCTCGGCCTCATCCTCCACGTTC +
Preference number: 5 (lower is better)
Translates to: SAASSMTTSSAVMVS*RPSTFLVSASSSTF
Trigger: GAACGTGGAGGATGAGGCCGAGACCAAGAAGGTGCTGGGCCTTCAAGATACCATCACGGCGGAGCTGGTGGTCATCGAAGACGCGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS GCA 90 bp GGCGTGTTGGAGACTCGCTTGTCTTTGGGCGTGCCCACCGGCGTCTaGTGTGAATTCATCACCACCTCTGTCTTGCGCTCCTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: GVLETRLSLGVPTGV*CEFITTSVLRSSLA
Trigger: AGCCAAGGAGGAGCGCAAGACAGAGGTGGTGATGAATTCACAGCAGACGCCGGTGGGCACGCCCAAAGACAAGCGAGTCTCCAACACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000589012.5
ENST00000593172.5
ENST00000633534.1
CDS-3UTR CAA 90 bp CACCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGAGTGACCTCGTCCGCTTaGTGGATGAGTTCGTCCACC +
Preference number: 5 (lower is better)
Translates to: HPRPLAPKEARPHPNCLRVTSSA*WMSSST
Trigger: GGTGGACGAACTCATCCACAAAGCGGACGAGGTCAC...TCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp ACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGCTGCCAGGCCCAGCACCTTCTaGGTCTCGGCCTCATCCTCC +
Preference number: 5 (lower is better)
Translates to: TVSVRMCTNVPLGTSVAARPSTF*VSASSS
Trigger: GGAGGATGAGGCCGAGACCAAGAAGGTGCTGGGCCT...GGCAGCTACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp GGGTCCTTGTCTCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAGATCTCGGGGTATGGTaGGGAAGACCCAGGACCCTG +
Preference number: 5 (lower is better)
Translates to: GSLSREKRVCPVSLLPGTDLGVW*GRPRTL
Trigger: CAGGGTCCTGGGTCTTCCCAACCATACCCCGAGATC...TGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGAGACAAGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp GGGTCCTTGTCTCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACACAGGAGGGAAGCCCCTaGCCACTTCCAATGAGAGGG +
Preference number: 5 (lower is better)
Translates to: GSLSREKRVCPVSLLPGTQEGSP*PLPMRG
Trigger: CCCTCTCATTGGAAGTGGCAAGGGGCTTCCCTCCTG...TGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGAGACAAGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp TCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACAGGAGGGAAGCCCCTaGCCACTTCCAATGAGAGGG +
Preference number: 5 (lower is better)
Translates to: SLGQGPSWGLVVQSQRVRQEGSP*PLPMRG
Trigger: CCCTCTCATTGGAAGTGGCAAGGGGCTTCCCTCCTG...TCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGACGCTCCCGCAGTGCCTaGGACTTCAGGTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRRSRSA*DFRCCS
Trigger: GCTGCAGCACCTGAAGTCCAAGGCACTGCGGGAGCG...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CAA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGAGAGACTCGCTTGTCTTaGGGCGTGCCCACCGGCGTC +
Preference number: 5 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRETRLS*GVPTGV
Trigger: GACGCCGGTGGGCACGCCCAAAGACAAGCGAGTCTC...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264560.11
ENST00000338448.10
CDS-3UTR CAA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCAGTGACCTCGTCCGCTTaGTGGATGAGTTCGTCCACC +
Preference number: 5 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSVTSSA*WMSSST
Trigger: GGTGGACGAACTCATCCACAAAGCGGACGAGGTCAC...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp GTCCCTAGGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGCGCCGTGATGGTATCTaGAAGGCCCAGCACCTTCTT +
Preference number: 5 (lower is better)
Translates to: VPRAGTKLGPGCPKPTCERRDGI*KAQHLL
Trigger: AAGAAGGTGCTGGGCCTTCAAGATACCATCACGGCG...CTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCCTAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp CTCGGGGTATGGTTGGGAAGACCCAGGACCCTGGTCCAAGCAGGATGGAGAAGACGCCGTGATGGTATCTaGAAGGCCCAGCACCTTCTT +
Preference number: 5 (lower is better)
Translates to: LGVWLGRPRTLVQAGWRRRRDGI*KAQHLL
Trigger: AAGAAGGTGCTGGGCCTTCAAGATACCATCACGGCG...TCTTCTCCATCCTGCTTGGACCAGGGTCCTGGGTCTTCCCAACCATACCCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp TGTGAGACGGTGTCTGTGAGAATGTGCACGAATGTGCCTCTGGGGACGAGTGTAGTGACCTCGTCCGCTTaGTGGATGAGTTCGTCCACC +
Preference number: 5 (lower is better)
Translates to: CETVSVRMCTNVPLGTSVVTSSA*WMSSST
Trigger: GGTGGACGAACTCATCCACAAAGCGGACGAGGTCAC...TACACTCGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp GCTTCTCTGGGAAAATCAAGAACATCGGGGGCCTCGTCACACACCAGAAGCAGAGTGACCTCGTCCGCTTaGTGGATGAGTTCGTCCACC +
Preference number: 5 (lower is better)
Translates to: ASLGKSRTSGASSHTRSRVTSSA*WMSSST
Trigger: GGTGGACGAACTCATCCACAAAGCGGACGAGGTCAC...TCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTTCTTGATTTTCCCAGAGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp GGGCAGGGACCAAGTTGGGGCCTGGTTGTCCAAAGCCAACGTGTGAGACGGTGTGTTCACGCTGTTTATTaGCTTCTCTGGGAAAATCAA +
Preference number: 5 (lower is better)
Translates to: GQGPSWGLVVQSQRVRRCVHAVY*LLWENQ
Trigger: TTGATTTTCCCAGAGAAGCAAATAAACAGCGTGAAC...ACACCGTCTCACACGTTGGCTTTGGACAACCAGGCCCCAACTTGGTCCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp CACCCAAGACCTTTAGCCCCCAAAGAGGCACGGCCTCACCCCAACTGCCTGAGAGTTCACGCTGTTTATTaGCTTCTCTGGGAAAATCAA +
Preference number: 5 (lower is better)
Translates to: HPRPLAPKEARPHPNCLRVHAVY*LLWENQ
Trigger: TTGATTTTCCCAGAGAAGCAAATAAACAGCGTGAAC...TCTCAGGCAGTTGGGGTGAGGCCGTGCCTCTTTGGGGGCTAAAGGTCTTGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp GGGTCCTTGTCTCGGGAAAAGCGGGTCTGTCCTGTCTCTCTCCTACCAGGCACAGTTCACGCTGTTTATTaGCTTCTCTGGGAAAATCAA +
Preference number: 5 (lower is better)
Translates to: GSLSREKRVCPVSLLPGTVHAVY*LLWENQ
Trigger: TTGATTTTCCCAGAGAAGCAAATAAACAGCGTGAAC...TGTGCCTGGTAGGAGAGAGACAGGACAGACCCGCTTTTCCCGAGACAAGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS-3UTR CAA 90 bp TCGGGGGCCTCGTCACACACCAGAAGCAGAGGGGGTTATAGCAAGGGCACTTCAGTTCACGCTGTTTATTaGCTTCTCTGGGAAAATCAA +
Preference number: 5 (lower is better)
Translates to: SGASSHTRSRGGYSKGTSVHAVY*LLWENQ
Trigger: TTGATTTTCCCAGAGAAGCAAATAAACAGCGTGAAC...TGAAGTGCCCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000590161.2
ENST00000592155.5
CDS GCA 72 bp CCCGGCGGGCCGGACGTGGCCTCGCCTGGCTGTGCCTaGACACCGGTGATCTCCCGCCGGGAGGGCGTGGTC +
Preference number: 6 (lower is better)
Translates to: PGGPDVASPGCA*TPVISRREGVV
Trigger: GACCACGCCCTCCCGGCGGGAGATCACCGGTGTGCAGGCACAGCCAGGCGAGGCCACGTCCGGCCCGCCGGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS GCA 72 bp GATCCCCGGCGGGCCGGACGTGGCCTCGCCTGGCTGTaGCTGCACACCGGTGATCTCCCGCCGGGAGGGCGT +
Preference number: 6 (lower is better)
Translates to: DPRRAGRGLAWL*LHTGDLPPGGR
Trigger: ACGCCCTCCCGGCGGGAGATCACCGGTGTGCAGGCACAGCCAGGCGAGGCCACGTCCGGCCCGCCGGGGATC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS CCA 72 bp GGGCTGGATCCCCGGCGGGCCGGACGTGGCCTCGCCTaGCTGTGCCTGCACACCGGTGATCTCCCGCCGGGA +
Preference number: 6 (lower is better)
Translates to: GLDPRRAGRGLA*LCLHTGDLPPG
Trigger: TCCCGGCGGGAGATCACCGGTGTGCAGGCACAGCCAGGCGAGGCCACGTCCGGCCCGCCGGGGATCCAGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS CCA 72 bp GGGCCCGGACTGGGCTCGGGGCCGCCGCGTTCTCCTTaGCAGTGGCTGGGGCGGAGTCTCCACGCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: GPGLGSGPPRSP*QWLGRSLHAPA
Trigger: TGCTGGAGCGTGGAGACTCCGCCCCAGCCACTGCCAAGGAGAACGCGGCGGCCCCGAGCCCAGTCCGGGCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000589012.5
ENST00000592870.5
ENST00000593172.5
ENST00000633534.1
CDS TCA 72 bp TCCTGGGGGTCGCTGGTGGTGGCCTCGGGCCCCGCCTaGTTCTCTTCCCTGGAGGCGGCCTCCGTGGGAGGC +
Preference number: 6 (lower is better)
Translates to: SWGSLVVASGPA*FSSLEAASVGG
Trigger: GCCTCCCACGGAGGCCGCCTCCAGGGAAGAGAATCAGGCGGGGCCCGAGGCCACCACCAGCGACCCCCAGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS GCA 72 bp CCCTGGAGGCGGCCTCCGTGGGAGGCTCGGCAGCACTaGCGTTGGGTGGTGCAGGCTCCTTGGGCTCAGCCG +
Preference number: 6 (lower is better)
Translates to: PWRRPPWEARQH*RWVVQAPWAQP
Trigger: CGGCTGAGCCCAAGGAGCCTGCACCACCCAACGGCAGTGCTGCCGAGCCTCCCACGGAGGCCGCCTCCAGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS GCA 72 bp GATGGCCTGCAGCCGCTCCTGCTGGGACGTGGTCTCTaGCGCCAGGACCCCTTCCCGGTGCCTCCCAGGGGC +
Preference number: 6 (lower is better)
Translates to: DGLQPLLLGRGL*RQDPFPVPPRG
Trigger: GCCCCTGGGAGGCACCGGGAAGGGGTCCTGGCGGCAGAGACCACGTCCCAGCAGGAGCGGCTGCAGGCCATC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586776.1
CDS CCA 72 bp CGGGCCCTGTCCGAGGCGGGAGGGGCGTGTGTGGGATaGGGGCGTCGCACTCGTCCTTCCAGAACCCACGCC +
Preference number: 6 (lower is better)
Translates to: RALSEAGGACVG*GRRTRPSRTHA
Trigger: GGCGTGGGTTCTGGAAGGACGAGTGCGACGCCCCCATCCCACACACGCCCCTCCCGCCTCGGACAGGGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586055.2
CDS CCA 72 bp CAGGGCGGGCCCTGTCCGAGGCGGGAGGGGCGTGTGTaGGATGGGGGCGTCGCACTCGTCCTTCCAGAACCC +
Preference number: 6 (lower is better)
Translates to: QGGPCPRREGRV*DGGVALVLPEP
Trigger: GGGTTCTGGAAGGACGAGTGCGACGCCCCCATCCCACACACGCCCCTCCCGCCTCGGACAGGGCCCGCCCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586055.2
CDS GCA 72 bp GATGGCCTGCAGCCGCTCCTGCTGGGACGTGGTCTCTaGCGCCAGGACCTCCATCTCCCCGCCGAGGTCCGG +
Preference number: 6 (lower is better)
Translates to: DGLQPLLLGRGL*RQDLHLPAEVR
Trigger: CCGGACCTCGGCGGGGAGATGGAGGTCCTGGCGGCAGAGACCACGTCCCAGCAGGAGCGGCTGCAGGCCATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000592870.5
CDS CCA 72 bp ATGAAGATCATTGTGACCGGGGGCTCCTGGCCGGGCTaGATCCCCGGCGGGCCGGACGTGGCCTCGCCTGGC +
Preference number: 6 (lower is better)
Translates to: MKIIVTGGSWPG*IPGGPDVASPG
Trigger: GCCAGGCGAGGCCACGTCCGGCCCGCCGGGGATCCAGCCCGGCCAGGAGCCCCCGGTCACAATGATCTTCAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS CCA 72 bp TGGTGGTGGCCTCGGGCCCCGCCTGATTCTCTTCCCTaGAGGCGGCCTCCGTGGGAGGCTCGGCAGCACTGC +
Preference number: 6 (lower is better)
Translates to: WWWPRAPPDSLP*RRPPWEARQHC
Trigger: GCAGTGCTGCCGAGCCTCCCACGGAGGCCGCCTCCAGGGAAGAGAATCAGGCGGGGCCCGAGGCCACCACCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS CCA 72 bp CGGGAGCCCCGCAGAGGCCTCCGCGGTGCGGGGCGTTaGTGTTGGAAGGGCCCAGAGAGGTTACGCAACGGC +
Preference number: 6 (lower is better)
Translates to: REPRRGLRGAGR*CWKGPERLRNG
Trigger: GCCGTTGCGTAACCTCTCTGGGCCCTTCCAACACCAACGCCCCGCACCGCGGAGGCCTCTGCGGGGCTCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586055.2
CDS CAA 72 bp GAGGCGGCCTCCGTGGGAGGCTCGGCAGCACTGCCGTaGGGTGGTGCAGGCTCCTTGGGCTCAGCCGCGTCT +
Preference number: 6 (lower is better)
Translates to: EAASVGGSAALP*GGAGSLGSAAS
Trigger: AGACGCGGCTGAGCCCAAGGAGCCTGCACCACCCAACGGCAGTGCTGCCGAGCCTCCCACGGAGGCCGCCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS CAA 90 bp CCGACGGGAGCCCCGCAGAGGCCTCCGCGGTGCGGGGCGTTGGTGTaGGAAGGGCCCAGAGAGGTTACGCAACGGCCAAGGTCACCCAGC +
Preference number: 6 (lower is better)
Translates to: PTGAPQRPPRCGALV*EGPREVTQRPRSPS
Trigger: GCTGGGTGACCTTGGCCGTTGCGTAACCTCTCTGGGCCCTTCCAACACCAACGCCCCGCACCGCGGAGGCCTCTGCGGGGCTCCCGTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586055.2
CDS GCA 72 bp CCAAACCCGACGGGAGCCCCGCAGAGGCCTCCGCGGTaGGGGGCGTTGGTGTTGGAAGGGCCCAGAGAGGTT +
Preference number: 6 (lower is better)
Translates to: PNPTGAPQRPPR*GALVLEGPREV
Trigger: AACCTCTCTGGGCCCTTCCAACACCAACGCCCCGCACCGCGGAGGCCTCTGCGGGGCTCCCGTCGGGTTTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586055.2
CDS CCA 72 bp AGGCGGCCTCCGTGGGAGGCTCGGCAGCACTGCCGTTaGGTGGTGCAGGCTCCTTGGGCTCAGCCGCGTCTT +
Preference number: 6 (lower is better)
Translates to: RRPPWEARQHCR*VVQAPWAQPRL
Trigger: AAGACGCGGCTGAGCCCAAGGAGCCTGCACCACCCAACGGCAGTGCTGCCGAGCCTCCCACGGAGGCCGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS CCA 72 bp TCTCTGCGATGGCCTGCAGCCGCTCCTGCTGGGACGTaGTCTCTGCCGCCAGGACCCCTTCCCGGTGCCTCC +
Preference number: 6 (lower is better)
Translates to: SLRWPAAAPAGT*SLPPGPLPGAS
Trigger: GGAGGCACCGGGAAGGGGTCCTGGCGGCAGAGACCACGTCCCAGCAGGAGCGGCTGCAGGCCATCGCAGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586776.1
CDS CAA 72 bp GCCCCGCAGAGGCCTCCGCGGTGCGGGGCGTTGGTGTaGGAAGGGCCCAGAGAGGTTACGCAACGGCCAAGG +
Preference number: 6 (lower is better)
Translates to: APQRPPRCGALV*EGPREVTQRPR
Trigger: CCTTGGCCGTTGCGTAACCTCTCTGGGCCCTTCCAACACCAACGCCCCGCACCGCGGAGGCCTCTGCGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586055.2
CDS CAA 72 bp ACGGGAGCCCCGCAGAGGCCTCCGCGGTGCGGGGCGTaGGTGTTGGAAGGGCCCAGAGAGGTTACGCAACGG +
Preference number: 6 (lower is better)
Translates to: TGAPQRPPRCGA*VLEGPREVTQR
Trigger: CCGTTGCGTAACCTCTCTGGGCCCTTCCAACACCAACGCCCCGCACCGCGGAGGCCTCTGCGGGGCTCCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586055.2
CDS CAA 90 bp TCTTCCCTGGAGGCGGCCTCCGTGGGAGGCTCGGCAGCACTGCCGTaGGGTGGTGCAGGCTCCTTGGGCTCAGCCGCGTCTTCGATGACC +
Preference number: 6 (lower is better)
Translates to: SSLEAASVGGSAALP*GGAGSLGSAASSMT
Trigger: GGTCATCGAAGACGCGGCTGAGCCCAAGGAGCCTGCACCACCCAACGGCAGTGCTGCCGAGCCTCCCACGGAGGCCGCCTCCAGGGAAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS CAA 90 bp CCAAACCCGACGGGAGCCCCGCAGAGGCCTCCGCGGTGCGGGGCGTaGGTGTTGGAAGGGCCCAGAGAGGTTACGCAACGGCCAAGGTCA +
Preference number: 6 (lower is better)
Translates to: PNPTGAPQRPPRCGA*VLEGPREVTQRPRS
Trigger: TGACCTTGGCCGTTGCGTAACCTCTCTGGGCCCTTCCAACACCAACGCCCCGCACCGCGGAGGCCTCTGCGGGGCTCCCGTCGGGTTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586055.2
CDS CCA 72 bp TCTCTGCGATGGCCTGCAGCCGCTCCTGCTGGGACGTaGTCTCTGCCGCCAGGACCTCCATCTCCCCGCCGA +
Preference number: 6 (lower is better)
Translates to: SLRWPAAAPAGT*SLPPGPPSPRR
Trigger: TCGGCGGGGAGATGGAGGTCCTGGCGGCAGAGACCACGTCCCAGCAGGAGCGGCTGCAGGCCATCGCAGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000589012.5
ENST00000592870.5
CDS CCA 72 bp CCCCGCAGAGGCCTCCGCGGTGCGGGGCGTTGGTGTTaGAAGGGCCCAGAGAGGTTACGCAACGGCCAAGGT +
Preference number: 6 (lower is better)
Translates to: PRRGLRGAGRWC*KGPERLRNGQG
Trigger: ACCTTGGCCGTTGCGTAACCTCTCTGGGCCCTTCCAACACCAACGCCCCGCACCGCGGAGGCCTCTGCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586055.2
CDS CCA 72 bp ATGCTGGGCGGAGGAGCTGAGTCCCGGGCAAAGGCGTaGAAAAGCTCAGGGCGGCGGCGGTCCTGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: MLGGGAESRAKA*KSSGRRRSWCC
Trigger: GCAGCACCAGGACCGCCGCCGCCCTGAGCTTTTCCACGCCTTTGCCCGGGACTCAGCTCCTCCGCCCAGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586055.2
CDS CAA 90 bp GCCCCGGCCGTGGACCCTGCCTCGCTCAGCGTGACCTCGTCCGCTTaGTGGATGAGTTCGTCCACCTCGGAGGAGCTCAGGGGGTGGATC +
Preference number: 6 (lower is better)
Translates to: APAVDPASLSVTSSA*WMSSSTSEELRGWI
Trigger: GATCCACCCCCTGAGCTCCTCCGAGGTGGACGAACTCATCCACAAAGCGGACGAGGTCACGCTGAGCGAGGCAGGGTCCACGGCCGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS CAA 90 bp TCCGTGGGAGGCTCGGCAGCACTGCCGTTGGGTGGTGCAGGCTCCTaGGGCTCAGCCGCGTCTTCGATGACCACCAGCTCCGCCGTGATG +
Preference number: 6 (lower is better)
Translates to: SVGGSAALPLGGAGS*GSAASSMTTSSAVM
Trigger: CATCACGGCGGAGCTGGTGGTCATCGAAGACGCGGCTGAGCCCAAGGAGCCTGCACCACCCAACGGCAGTGCTGCCGAGCCTCCCACGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS GCA 72 bp CGCTTCCGCTTCTCTGCGATGGCCTGCAGCCGCTCCTaGTGGGACGTGGTCTCTGCCGCCAGGACCTCCATC +
Preference number: 6 (lower is better)
Translates to: RFRFSAMACSRS*WDVVSAARTSI
Trigger: GATGGAGGTCCTGGCGGCAGAGACCACGTCCCAGCAGGAGCGGCTGCAGGCCATCGCAGAGAAGCGGAAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000589012.5
ENST00000592870.5
CDS GCA 72 bp TCCTCCAGCTGCCGGCGCTTGTTCTCGATCTCCGCCTaGCGCTTCCGCTTCTCTGCGATGGCCTGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: SSSCRRLFSISA*RFRFSAMACSR
Trigger: GCGGCTGCAGGCCATCGCAGAGAAGCGGAAGCGGCAGGCGGAGATCGAGAACAAGCGCCGGCAGCTGGAGGA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000586776.1
ENST00000589012.5
ENST00000592870.5
CDS GCA 72 bp CTCCGTGGGAGGCTCGGCAGCACTGCCGTTGGGTGGTaGAGGCTCCTTGGGCTCAGCCGCGTCTTCGATGAC +
Preference number: 6 (lower is better)
Translates to: LRGRLGSTAVGW*RLLGLSRVFDD
Trigger: GTCATCGAAGACGCGGCTGAGCCCAAGGAGCCTGCACCACCCAACGGCAGTGCTGCCGAGCCTCCCACGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS GCA 72 bp TGCCCAGAGGGAGCGGCTGCCGAGGGAGCAGCGTGGTaGTGGACAGCACCCTGGTCTCCCCTGTCACCTTGT +
Preference number: 6 (lower is better)
Translates to: CPEGAAAEGAAW*WTAPWSPLSPC
Trigger: ACAAGGTGACAGGGGAGACCAGGGTGCTGTCCAGCACCACGCTGCTCCCTCGGCAGCCGCTCCCTCTGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338448.10
ENST00000587513.3
ENST00000592155.5
ENST00000593172.5
CDS CCA 72 bp TGGGCTCGGGGCCGCCGCGTTCTCCTTGGCAGTGGCTaGGGCGGAGTCTCCACGCTCCAGCACCTCAATTTC +
Preference number: 6 (lower is better)
Translates to: WARGRRVLLGSG*GGVSTLQHLNF
Trigger: GAAATTGAGGTGCTGGAGCGTGGAGACTCCGCCCCAGCCACTGCCAAGGAGAACGCGGCGGCCCCGAGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000589012.5
ENST00000592870.5
ENST00000593172.5
ENST00000633534.1
CDS CCA 72 bp CCAGAGGGAGCGGCTGCCGAGGGAGCAGCGTGGTGCTaGACAGCACCCTGGTCTCCCCTGTCACCTTGTCCT +
Preference number: 6 (lower is better)
Translates to: PEGAAAEGAAWC*TAPWSPLSPCP
Trigger: AGGACAAGGTGACAGGGGAGACCAGGGTGCTGTCCAGCACCACGCTGCTCCCTCGGCAGCCGCTCCCTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338448.10
ENST00000587513.3
ENST00000592155.5
ENST00000593172.5
CDS CAA 72 bp GGCTCGGCAGCACTGCCGTTGGGTGGTGCAGGCTCCTaGGGCTCAGCCGCGTCTTCGATGACCACCAGCTCC +
Preference number: 6 (lower is better)
Translates to: GSAALPLGGAGS*GSAASSMTTSS
Trigger: GGAGCTGGTGGTCATCGAAGACGCGGCTGAGCCCAAGGAGCCTGCACCACCCAACGGCAGTGCTGCCGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS TCA 72 bp GGCTCGGGGCCCGGCGAGGGCGTCGTCTGGAGCGCGTaGGATAGTCCTGCTCCAGGAGATGAGTTCATGAGG +
Preference number: 6 (lower is better)
Translates to: GSGPGEGVVWSA*DSPAPGDEFMR
Trigger: CCTCATGAACTCATCTCCTGGAGCAGGACTATCTCACGCGCTCCAGACGACGCCCTCGCCGGGCCCCGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586055.2
CDS CCA 72 bp TTCCGCTTCTCTGCGATGGCCTGCAGCCGCTCCTGCTaGGACGTGGTCTCTGCCGCCAGGACCTCCATCTCC +
Preference number: 6 (lower is better)
Translates to: FRFSAMACSRSC*DVVSAARTSIS
Trigger: GGAGATGGAGGTCCTGGCGGCAGAGACCACGTCCCAGCAGGAGCGGCTGCAGGCCATCGCAGAGAAGCGGAA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000589012.5
ENST00000592870.5
CDS CCA 72 bp TCATGGGGGAGCCGTCAACCGTCCTCAGGGGCGTGTTaGAGACTCGCTTGTCTTTGGGCGTGCCCACCGGCG +
Preference number: 6 (lower is better)
Translates to: SWGSRQPSSGAC*RLACLWACPPA
Trigger: CGCCGGTGGGCACGCCCAAAGACAAGCGAGTCTCCAACACGCCCCTGAGGACGGTTGACGGCTCCCCCATGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000589012.5
ENST00000593172.5
ENST00000633534.1
CDS GCA 72 bp CGGAGGAGCTCAGGGGGTGGATCCCGTTCTCGGCGGTaGCGTCCACAGCATGGACCACTGCCTTCATCATGG +
Preference number: 6 (lower is better)
Translates to: RRSSGGGSRSRR*RPQHGPLPSSW
Trigger: CCATGATGAAGGCAGTGGTCCATGCTGTGGACGGCACCGCCGAGAACGGGATCCACCCCCTGAGCTCCTCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264560.11
ENST00000590161.2
ENST00000633534.1
CDS GCA 72 bp CGGAGGAGCTCAGGGGGTGGATCCCGTTCTCGGCGGTaGCGTCCACAGCATGGACCACTTTGGTCTCGTCCT +
Preference number: 6 (lower is better)
Translates to: RRSSGGGSRSRR*RPQHGPLWSRP
Trigger: AGGACGAGACCAAAGTGGTCCATGCTGTGGACGGCACCGCCGAGAACGGGATCCACCCCCTGAGCTCCTCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338448.10
ENST00000587513.3
ENST00000592155.5
ENST00000593172.5
CDS CCA 72 bp GACCCTGCCTCGCTCAGCGTGACCTCGTCCGCTTTGTaGATGAGTTCGTCCACCTCGGAGGAGCTCAGGGGG +
Preference number: 6 (lower is better)
Translates to: DPASLSVTSSAL*MSSSTSEELRG
Trigger: CCCCCTGAGCTCCTCCGAGGTGGACGAACTCATCCACAAAGCGGACGAGGTCACGCTGAGCGAGGCAGGGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS CCA 72 bp AACGGTGCTTCTTCATGTCGAGGTCCTGGGGGTCGCTaGTGGTGGCCTCGGGCCCCGCCTGATTCTCTTCCC +
Preference number: 6 (lower is better)
Translates to: NGASSCRGPGGR*WWPRAPPDSLP
Trigger: GGGAAGAGAATCAGGCGGGGCCCGAGGCCACCACCAGCGACCCCCAGGACCTCGACATGAAGAAGCACCGTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS CAA 72 bp ATCATGGGGGAGCCGTCAACCGTCCTCAGGGGCGTGTaGGAGACTCGCTTGTCTTTGGGCGTGCCCACCGGC +
Preference number: 6 (lower is better)
Translates to: IMGEPSTVLRGV*ETRLSLGVPTG
Trigger: GCCGGTGGGCACGCCCAAAGACAAGCGAGTCTCCAACACGCCCCTGAGGACGGTTGACGGCTCCCCCATGAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000589012.5
ENST00000593172.5
ENST00000633534.1
CDS CAA 90 bp CAGCAACGGGTGATGCAGGCAGTGAACCATCCACTGTGCGTTCCCTaGAGGCCCGGGCCCTCGCTTCCTGCCTACCCCAAGTTCCCCACC +
Preference number: 6 (lower is better)
Translates to: QQRVMQAVNHPLCVP*RPGPSLPAYPKFPT
Trigger: GGTGGGGAACTTGGGGTAGGCAGGAAGCGAGGGCCCGGGCCTCAAGGGAACGCACAGTGGATGGTTCACTGCCTGCATCACCCGTTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586776.1
CDS TCA 72 bp GCGCGTGAGATAGTCCTGCTCCAGGAGATGAGTTCATaGGGCCCAAACCCGACGGGAGCCCCGCAGAGGCCT +
Preference number: 6 (lower is better)
Translates to: AREIVLLQEMSS*GPNPTGAPQRP
Trigger: AGGCCTCTGCGGGGCTCCCGTCGGGTTTGGGCCTCATGAACTCATCTCCTGGAGCAGGACTATCTCACGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586055.2
CDS GCA 72 bp AAGTTCCCCACCCTAGCCCAGGCCTCTAGTGTTCCCTaGCAACTCCCTGCCCCCTCACAGCTCCCTCTCCAC +
Preference number: 6 (lower is better)
Translates to: KFPTLAQASSVP*QLPAPSQLPLH
Trigger: GTGGAGAGGGAGCTGTGAGGGGGCAGGGAGTTGGCAGGGAACACTAGAGGCCTGGGCTAGGGTGGGGAACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586776.1
CDS CAA 72 bp TGTGAATTCATCACCACCTCTGTCTTGCGCTCCTCCTaGGCTGGACTCGGGGCTGGGGCCCGGACTGGGCTC +
Preference number: 6 (lower is better)
Translates to: CEFITTSVLRSS*AGLGAGARTGL
Trigger: GAGCCCAGTCCGGGCCCCAGCCCCGAGTCCAGCCAAGGAGGAGCGCAAGACAGAGGTGGTGATGAATTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000589012.5
ENST00000592870.5
ENST00000593172.5
ENST00000633534.1
CDS CAA 72 bp GTGGACCCTGCCTCGCTCAGCGTGACCTCGTCCGCTTaGTGGATGAGTTCGTCCACCTCGGAGGAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: VDPASLSVTSSA*WMSSSTSEELR
Trigger: CCTGAGCTCCTCCGAGGTGGACGAACTCATCCACAAAGCGGACGAGGTCACGCTGAGCGAGGCAGGGTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS TCA 72 bp CAGCATGGACCACTTTGGTCTCGTCCTCGTAGACTTTaGTGCCCAGAGGGAGCGGCTGCCGAGGGAGCAGCG +
Preference number: 6 (lower is better)
Translates to: QHGPLWSRPRRL*CPEGAAAEGAA
Trigger: CGCTGCTCCCTCGGCAGCCGCTCCCTCTGGGCATCAAAGTCTACGAGGACGAGACCAAAGTGGTCCATGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338448.10
ENST00000587513.3
ENST00000592155.5
ENST00000593172.5
CDS CCA 72 bp CTGGCTTGGGGGCCCTTCCTGAATAGCCAGCTCAGCTaGAGTTCTCGGTCAGCCCCAGCAACGGGTGATGCA +
Preference number: 6 (lower is better)
Translates to: LAWGPFLNSQLS*SSRSAPATGDA
Trigger: TGCATCACCCGTTGCTGGGGCTGACCGAGAACTCCAGCTGAGCTGGCTATTCAGGAAGGGCCCCCAAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586776.1
CDS CCA 72 bp CGAGGCCCCACGAGTTCCTTCCAGAGGTCCTACCTTTaGGCGTGCCCACCGGCGTCTGCTGTGAATTCATCA +
Preference number: 6 (lower is better)
Translates to: RGPTSSFQRSYL*ACPPASAVNSS
Trigger: TGATGAATTCACAGCAGACGCCGGTGGGCACGCCCAAAGGTAGGACCTCTGGAAGGAACTCGTGGGGCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592870.5
CDS CCA 72 bp GCCAGAAGCACTTCAGACGCCAGCGTCAATCCCGGCTaGTGGCTGTCCCGCTATCGATACAGAAGCGGACAC +
Preference number: 6 (lower is better)
Translates to: ARSTSDASVNPG*WLSRYRYRSGH
Trigger: GTGTCCGCTTCTGTATCGATAGCGGGACAGCCACCAGCCGGGATTGACGCTGGCGTCTGAAGTGCTTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592870.5
CDS CAA 90 bp CTCAGCCGCGTCTTCGATGACCACCAGCTCCGCCGTGATGGTATCTaGAAGGCCCAGCACCTTCTTGGTCTCGGCCTCATCCTCCACGTT +
Preference number: 6 (lower is better)
Translates to: LSRVFDDHQLRRDGI*KAQHLLGLGLILHV
Trigger: AACGTGGAGGATGAGGCCGAGACCAAGAAGGTGCTGGGCCTTCAAGATACCATCACGGCGGAGCTGGTGGTCATCGAAGACGCGGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS GCA 72 bp GAGACTCGCTTGTCTTTGGGCGTGCCCACCGGCGTCTaGTGTGAATTCATCACCACCTCTGTCTTGCGCTCC +
Preference number: 6 (lower is better)
Translates to: ETRLSLGVPTGV*CEFITTSVLRS
Trigger: GGAGCGCAAGACAGAGGTGGTGATGAATTCACAGCAGACGCCGGTGGGCACGCCCAAAGACAAGCGAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000589012.5
ENST00000593172.5
ENST00000633534.1
CDS GCA 72 bp TCAGGGGCGTGTTGGAGACTCGCTTGTCTTTGGGCGTaGCCACCGGCGTCTGCTGTGAATTCATCACCACCT +
Preference number: 6 (lower is better)
Translates to: SGACWRLACLWA*PPASAVNSSPP
Trigger: AGGTGGTGATGAATTCACAGCAGACGCCGGTGGGCACGCCCAAAGACAAGCGAGTCTCCAACACGCCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000589012.5
ENST00000593172.5
ENST00000633534.1
CDS GCA 72 bp CCCACGAGTTCCTTCCAGAGGTCCTACCTTTGGGCGTaGCCACCGGCGTCTGCTGTGAATTCATCACCACCT +
Preference number: 6 (lower is better)
Translates to: PTSSFQRSYLWA*PPASAVNSSPP
Trigger: AGGTGGTGATGAATTCACAGCAGACGCCGGTGGGCACGCCCAAAGGTAGGACCTCTGGAAGGAACTCGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592870.5
CDS CCA 72 bp AGAAGCACTTCAGACGCCAGCGTCAATCCCGGCTGGTaGCTGTCCCGCTATCGATACAGAAGCGGACACGTT +
Preference number: 6 (lower is better)
Translates to: RSTSDASVNPGW*LSRYRYRSGHV
Trigger: AACGTGTCCGCTTCTGTATCGATAGCGGGACAGCCACCAGCCGGGATTGACGCTGGCGTCTGAAGTGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592870.5
CDS CCA 72 bp TCATGGGGGAGCCGTCAACCGTCCTCAGGGGCGTGTTaGAGACTCGCTTGTAGTTCATTCCTCATCCTCAGC +
Preference number: 6 (lower is better)
Translates to: SWGSRQPSSGAC*RLACSSFLILS
Trigger: GCTGAGGATGAGGAATGAACTACAAGCGAGTCTCCAACACGCCCCTGAGGACGGTTGACGGCTCCCCCATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590161.2
ENST00000592155.5
CDS CAA 72 bp GTCTTCGATGACCACCAGCTCCGCCGTGATGGTATCTaGAAGGCCCAGCACCTTCTTGGTCTCGGCCTCATC +
Preference number: 6 (lower is better)
Translates to: VFDDHQLRRDGI*KAQHLLGLGLI
Trigger: GATGAGGCCGAGACCAAGAAGGTGCTGGGCCTTCAAGATACCATCACGGCGGAGCTGGTGGTCATCGAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264560.11
ENST00000338448.10
ENST00000587513.3
ENST00000590161.2
ENST00000592155.5
ENST00000593172.5
ENST00000633534.1
CDS TCA 72 bp CTGTCCCGCTATCGATACAGAAGCGGACACGTTCCGTaGAATGCAGTTTACAGACAGGGTCTCGCTCTGTCG +
Preference number: 6 (lower is better)
Translates to: LSRYRYRSGHVP*NAVYRQGLALS
Trigger: CGACAGAGCGAGACCCTGTCTGTAAACTGCATTTCACGGAACGTGTCCGCTTCTGTATCGATAGCGGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592870.5