RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PALD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000107719

Ensembl transcript IDs: ENST00000263563.7

Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTGTCCCCTCCACCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTaGTTGGGCAGCAACAAGGGGAGCGGCAATGGCAGAGCAGCAGGA +
Preference number: 1 (lower is better)
Translates to: TVPSTHLRLPDARGQ*LGSNKGSGNGRAAG
Trigger: TCCTGCTGCTCTGCCATTGCCGCTCCCCTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGGTGGAGGGGACAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR GCA 90 bp GCCGGGGGACCTGCAGCTCCAGGCCTTGGCTTCCTCTGTGCCTCCTaGCCAGGTTCCCAGACAAGTGGAGCAGGCCTCTTCCTCTGTGCT +
Preference number: 1 (lower is better)
Translates to: AGGPAAPGLGFLCAS*PGSQTSGAGLFLCA
Trigger: AGCACAGAGGAAGAGGCCTGCTCCACTTGTCTGGGAACCTGGGCAGGAGGCACAGAGGAAGCCAAGGCCTGGAGCTGCAGGTCCCCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR GCA 90 bp CAGGGTCTGGCCTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGATaGTCAGCAAGGATGGCCTGGAACCCAGGTGATCCCCTCCCACCA +
Preference number: 1 (lower is better)
Translates to: QGLAFSAPTGRQAQR*SARMAWNPGDPLPP
Trigger: TGGTGGGAGGGGATCACCTGGGTTCCAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAGGCCAGACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR GCA 90 bp ATAATAGATCTATCCAGAACACTGTCCCCTCCACCCACCTCAGGCTaGCAGACGCCCGAGGGCAGTGCTTGGGCAGCAACAAGGGGAGCG +
Preference number: 1 (lower is better)
Translates to: IIDLSRTLSPPPTSG*QTPEGSAWAATRGA
Trigger: CGCTCCCCTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGGTGGAGGGGACAGTGTTCTGGATAGATCTATTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR CCA 90 bp CATGGCACTTCTCTGCCACCTGTTCCCAGCAGCCTTCCCGCTGTGTaGAAACAGTGGATCCCAGCAGCCTCTAACTCAGCAGGGTCTGGC +
Preference number: 1 (lower is better)
Translates to: HGTSLPPVPSSLPAV*KQWIPAASNSAGSG
Trigger: GCCAGACCCTGCTGAGTTAGAGGCTGCTGGGATCCACTGTTTCCACACAGCGGGAAGGCTGCTGGGAACAGGTGGCAGAGAAGTGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR CCA 90 bp AGCACCAGTCCCCAGCTGGAAGAGCTGCAAGGCTCAACGCAAACATaGCACTTCTCTGCCACCTGTTCCCAGCAGCCTTCCCGCTGTGTG +
Preference number: 1 (lower is better)
Translates to: STSPQLEELQGSTQT*HFSATCSQQPSRCV
Trigger: CACACAGCGGGAAGGCTGCTGGGAACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCCTTGCAGCTCTTCCAGCTGGGGACTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR TCA 90 bp AGATCCACAGTGTTTGGCAACTGGGGGAGTGAGCCCCTTGGAGGCTaGACGCCGGCCTGTCTGCAAGGTACACACAGCAGTGTGCACCTT +
Preference number: 1 (lower is better)
Translates to: RSTVFGNWGSEPLGG*TPACLQGTHSSVHL
Trigger: AAGGTGCACACTGCTGTGTGTACCTTGCAGACAGGCCGGCGTTCAGCCTCCAAGGGGCTCACTCCCCCAGTTGCCAAACACTGTGGATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR TCA 90 bp GGAGAAGAGGACAGAGAGATCCACAGTGTTTGGCAACTGGGGGAGTaGGCCCCTTGGAGGCTGAACGCCGGCCTGTCTGCAAGGTACACA +
Preference number: 1 (lower is better)
Translates to: GEEDREIHSVWQLGE*APWRLNAGLSARYT
Trigger: TGTGTACCTTGCAGACAGGCCGGCGTTCAGCCTCCAAGGGGCTCACTCCCCCAGTTGCCAAACACTGTGGATCTCTCTGTCCTCTTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR GCA 90 bp CAGTGGATCCCAGCAGCCTCTAACTCAGCAGGGTCTGGCCTTTTCTaGTCCCACCGGAAGGCAGGCTCAAAGATGCTCAGCAAGGATGGC +
Preference number: 1 (lower is better)
Translates to: QWIPAASNSAGSGLF*SHRKAGSKMLSKDG
Trigger: GCCATCCTTGCTGAGCATCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAGGCCAGACCCTGCTGAGTTAGAGGCTGCTGGGATCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR CCA 90 bp CACAGCAGTGTGCACCTTGTGAGCACTCCAGTGAGTGCTCCTCCCTaGAGGTCAGCCACACACCTTGGTGGTTTGCAAGGGATGGCTGTG +
Preference number: 1 (lower is better)
Translates to: HSSVHLVSTPVSAPP*RSATHLGGLQGMAV
Trigger: CACAGCCATCCCTTGCAAACCACCAAGGTGTGTGGCTGACCTCCAGGGAGGAGCACTCACTGGAGTGCTCACAAGGTGCACACTGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR CCA 90 bp TCTCTGCCACCTGTTCCCAGCAGCCTTCCCGCTGTGTGGAAACAGTaGATCCCAGCAGCCTCTAACTCAGCAGGGTCTGGCCTTTTCTGC +
Preference number: 1 (lower is better)
Translates to: SLPPVPSSLPAVWKQ*IPAASNSAGSGLFC
Trigger: GCAGAAAAGGCCAGACCCTGCTGAGTTAGAGGCTGCTGGGATCCACTGTTTCCACACAGCGGGAAGGCTGCTGGGAACAGGTGGCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR GCA 90 bp GCAAGGTACACACAGCAGTGTGCACCTTGTGAGCACTCCAGTGAGTaGTCCTCCCTGGAGGTCAGCCACACACCTTGGTGGTTTGCAAGG +
Preference number: 1 (lower is better)
Translates to: ARYTQQCAPCEHSSE*SSLEVSHTPWWFAR
Trigger: CCTTGCAAACCACCAAGGTGTGTGGCTGACCTCCAGGGAGGAGCACTCACTGGAGTGCTCACAAGGTGCACACTGCTGTGTGTACCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR TCA 90 bp CAGAAGTACACGAGCCTAACCAAAGACAGGCTTTCCTGGTCCCAGTaGGCCAAGCAAGGTGGACAGCCTCCTCACTGTTCAGCTCCTGGG +
Preference number: 1 (lower is better)
Translates to: QKYTSLTKDRLSWSQ*AKQGGQPPHCSAPG
Trigger: CCCAGGAGCTGAACAGTGAGGAGGCTGTCCACCTTGCTTGGCTCACTGGGACCAGGAAAGCCTGTCTTTGGTTAGGCTCGTGTACTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR CCA 90 bp GAGCACTCCAGTGAGTGCTCCTCCCTGGAGGTCAGCCACACACCTTaGTGGTTTGCAAGGGATGGCTGTGCTGTCTCCCTGTCCTATAAA +
Preference number: 1 (lower is better)
Translates to: EHSSECSSLEVSHTP*WFARDGCAVSLSYK
Trigger: TTTATAGGACAGGGAGACAGCACAGCCATCCCTTGCAAACCACCAAGGTGTGTGGCTGACCTCCAGGGAGGAGCACTCACTGGAGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR CCA 90 bp CACTCCAGTGAGTGCTCCTCCCTGGAGGTCAGCCACACACCTTGGTaGTTTGCAAGGGATGGCTGTGCTGTCTCCCTGTCCTATAAAAAG +
Preference number: 1 (lower is better)
Translates to: HSSECSSLEVSHTPW*FARDGCAVSLSYKK
Trigger: CTTTTTATAGGACAGGGAGACAGCACAGCCATCCCTTGCAAACCACCAAGGTGTGTGGCTGACCTCCAGGGAGGAGCACTCACTGGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR TCA 90 bp CTGAGGCAGAGAGGTGATGTGATCAGCCAGTGGTCCCAACACAGCTaGAAGTCAGAGCCAACCATGAGAACACAAAGGATCCCTCCCCAT +
Preference number: 1 (lower is better)
Translates to: LRQRGDVISQWSQHS*KSEPTMRTQRIPPH
Trigger: ATGGGGAGGGATCCTTTGTGTTCTCATGGTTGGCTCTGACTTTCAGCTGTGTTGGGACCACTGGCTGATCACATCACCTCTCTGCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR TCA 90 bp GTCTCCCAGGTCGGAGATGGGGGCATGAGAGTCCAGAAAACTGGGTaGAGCTGCCTTTCACATAATAGATCTATCCAGAACACTGTCCCC +
Preference number: 1 (lower is better)
Translates to: VSQVGDGGMRVQKTG*SCLSHNRSIQNTVP
Trigger: GGGGACAGTGTTCTGGATAGATCTATTATGTGAAAGGCAGCTTCACCCAGTTTTCTGGACTCTCATGCCCCCATCTCCGACCTGGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR TCA 90 bp GGTAGGTTGTCATTCCTGAAGTCTCCCAGGTCGGAGATGGGGGCATaGGAGTCCAGAAAACTGGGTGAAGCTGCCTTTCACATAATAGAT +
Preference number: 1 (lower is better)
Translates to: GRLSFLKSPRSEMGA*ESRKLGEAAFHIID
Trigger: ATCTATTATGTGAAAGGCAGCTTCACCCAGTTTTCTGGACTCTCATGCCCCCATCTCCGACCTGGGAGACTTCAGGAATGACAACCTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR CAA 90 bp GTCCCCTCCACCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTGCTaGGGCAGCAACAAGGGGAGCGGCAATGGCAGAGCAGCAGGAGTA +
Preference number: 2 (lower is better)
Translates to: VPSTHLRLPDARGQC*GSNKGSGNGRAAGV
Trigger: TACTCCTGCTGCTCTGCCATTGCCGCTCCCCTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGGTGGAGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR GCA 90 bp GGACCACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCGACGCCCGAGGGCAGTaGTTGGGCAGCAACAAGGGG +
Preference number: 2 (lower is better)
Translates to: GPPQQPPSASTPWGSCCSDARGQ*LGSNKG
Trigger: CCCCTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTC...GCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR TCA 90 bp CACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCAGGTGAGCCCCTTGGAGGCTaGACGCCGGCCTGTCTGCAA +
Preference number: 2 (lower is better)
Translates to: HPSNHPQLALLGAPAAAGEPLGG*TPACLQ
Trigger: TTGCAGACAGGCCGGCGTTCAGCCTCCAAGGGGCTC...ACCTGCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR GCA 90 bp GGACCACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCCTCTGTGCCAGGGGCTaGCAGGCCAATCTGAGAGAG +
Preference number: 2 (lower is better)
Translates to: GPPQQPPSASTPWGSCCSLCARG*QANLRE
Trigger: CTCTCTCAGATTGGCCTGGCAGCCCCTGGCACAGAG...GCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR GCA 90 bp ACCCTCAGTGCACCCTTGCACACCTCACTGTCCATGAGGACCACCCCAGCAACCGCCGGGTCTGCTCTGTaGCAGGGGCTGCCAGGCCAA +
Preference number: 2 (lower is better)
Translates to: TLSAPLHTSLSMRTTPATAGSAL*QGLPGQ
Trigger: TTGGCCTGGCAGCCCCTGGCACAGAGCAGACCCGGC...GGTTGCTGGGGTGGTCCTCATGGACAGTGAGGTGTGCAAGGGTGCACTGAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR GCA 90 bp ACCCTCAGTGCACCCTTGCACACCTCACTGTCCATGAGGACCACCCCAGCAACCACCAGTGGCCGGGTCTaGTCTGTGCCAGGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: TLSAPLHTSLSMRTTPATTSGRV*SVPGAA
Trigger: GGCAGCCCCTGGCACAGAGCAGACCCGGCCACTGGT...GGTTGCTGGGGTGGTCCTCATGGACAGTGAGGTGTGCAAGGGTGCACTGAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CCA 90 bp TCCTCTGTGCCTCCTGCCCAGGTTCCCAGACAAGTGGAGCAGGCCTCTTCCTCTGTGGGGAGCTACCAGTaGCCGGGTCTGCTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: SSVPPAQVPRQVEQASSSVGSYQ*PGLLCA
Trigger: GGCACAGAGCAGACCCGGCCACTGGTAGCTCCCCAC...AGAGGAAGAGGCCTGCTCCACTTGTCTGGGAACCTGGGCAGGAGGCACAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR GCA 90 bp CTGTGTGGAAACAGTGGATCCCAGCAGCCTCTAACTCAGCAGGGTCTGGCCTTTCAGACACCCCAGGCCTaGGTGGGGCCCTGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: LCGNSGSQQPLTQQGLAFQTPQA*VGPCGW
Trigger: CCACCCACAGGGCCCCACGCAGGCCTGGGGTGTCTG...AAAGGCCAGACCCTGCTGAGTTAGAGGCTGCTGGGATCCACTGTTTCCACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CCA 90 bp GGACCACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCACAGTGTTTGGCAACTaGGGGAGTGAGCCCCTTGGA +
Preference number: 2 (lower is better)
Translates to: GPPQQPPSASTPWGSCCSTVFGN*GSEPLG
Trigger: TCCAAGGGGCTCACTCCCCCAGTTGCCAAACACTGT...GCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR GCA 90 bp CTGTGTGGAAACAGTGGATCCCAGCAGCCTCTAACTCAGCAGGGTCTGGCCTTTCCTTGGGGCTCCTGCTaGAGCAGGTGGGGGCACCAG +
Preference number: 2 (lower is better)
Translates to: LCGNSGSQQPLTQQGLAFPWGSC*SRWGHQ
Trigger: CTGGTGCCCCCACCTGCTGCAGCAGGAGCCCCAAGG...AAAGGCCAGACCCTGCTGAGTTAGAGGCTGCTGGGATCCACTGTTTCCACACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR GCA 90 bp GCAAGGCTCAACGCAAACATGGCACTTCTCTGCCACCTGTTCCCAGCAGCCTTCACTCCTTGGGGCTCCTaGTGCAGCAGGTGGGGGCAC +
Preference number: 2 (lower is better)
Translates to: ARLNANMALLCHLFPAAFTPWGS*CSRWGH
Trigger: GTGCCCCCACCTGCTGCAGCAGGAGCCCCAAGGAGT...GAAGGCTGCTGGGAACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CCA 90 bp TCCACCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTGCTTGGGCAGCAACAAGAGCCACACACCTTGGTaGTTTGCAAGGGATGGCTGT +
Preference number: 2 (lower is better)
Translates to: STHLRLPDARGQCLGSNKSHTPW*FARDGC
Trigger: ACAGCCATCCCTTGCAAACCACCAAGGTGTGTGGCT...CTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR CAA 90 bp GGACAGAGAGATCCACAGTGTTTGGCAACTGGGGGAGTGAGCCCCTaGGAGGCTGAACGCCGGCCTGTCTGCAAGGTACACACAGCAGTG +
Preference number: 2 (lower is better)
Translates to: GQRDPQCLATGGVSP*EAERRPVCKVHTAV
Trigger: CACTGCTGTGTGTACCTTGCAGACAGGCCGGCGTTCAGCCTCCAAGGGGCTCACTCCCCCAGTTGCCAAACACTGTGGATCTCTCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CCA 90 bp ACTGTCCATGAGGACCACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCAAGGGGAGCGGCAATaGCAGAGCAGCAGGAGTAAG +
Preference number: 2 (lower is better)
Translates to: TVHEDHPSNHPQLALLGAQGERQ*QSSRSK
Trigger: CTTACTCCTGCTGCTCTGCCATTGCCGCTCCCCTTG...AGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTGGTCCTCATGGACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR TCA 90 bp TCCTCTGTGCCTCCTGCCCAGGTTCCCAGACAAGTGGAGCAGGCCTCTTCCTCTTCGGAGATGGGGGCATaGGAGTCCAGAAAACTGGGT +
Preference number: 2 (lower is better)
Translates to: SSVPPAQVPRQVEQASSSSEMGA*ESRKLG
Trigger: ACCCAGTTTTCTGGACTCTCATGCCCCCATCTCCGA...AGAGGAAGAGGCCTGCTCCACTTGTCTGGGAACCTGGGCAGGAGGCACAGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CCA 90 bp CACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCAGGTAGTCTCTCCAGGAAGTaGGGGAATCATTTCAAGGCC +
Preference number: 2 (lower is better)
Translates to: HPSNHPQLALLGAPAAAGSLSRK*GNHFKA
Trigger: GGCCTTGAAATGATTCCCCCACTTCCTGGAGAGACT...ACCTGCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CCA 90 bp CTGTGTGGAAACAGTGGATCCCAGCAGCCTCTAACTCAGCAGGGTCTGGCCTTTGCAGGAGTAAGGAAGTaGGGAGCTACCAGTGGCCGG +
Preference number: 2 (lower is better)
Translates to: LCGNSGSQQPLTQQGLAFAGVRK*GATSGR
Trigger: CCGGCCACTGGTAGCTCCCCACTTCCTTACTCCTGC...AAAGGCCAGACCCTGCTGAGTTAGAGGCTGCTGGGATCCACTGTTTCCACACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CCA 90 bp CACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCAGGTGAGAGTCCAGAAAACTaGGTGAAGCTGCCTTTCACA +
Preference number: 2 (lower is better)
Translates to: HPSNHPQLALLGAPAAAGESPEN*VKLPFT
Trigger: TGTGAAAGGCAGCTTCACCCAGTTTTCTGGACTCTC...ACCTGCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CCA 90 bp CCAGTCCCCAGCTGGAAGAGCTGCAAGGCTCAACGCAAACATGGCACTTCTCTGGTGGTTTGCAAGGGATaGCTGTGCTGTCTCCCTGTC +
Preference number: 2 (lower is better)
Translates to: PVPSWKSCKAQRKHGTSLVVCKG*LCCLPV
Trigger: GACAGGGAGACAGCACAGCCATCCCTTGCAAACCAC...CAGAGAAGTGCCATGTTTGCGTTGAGCCTTGCAGCTCTTCCAGCTGGGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CCA 90 bp CTGTGTGGAAACAGTGGATCCCAGCAGCCTCTAACTCAGCAGGGTCTGGCCTTTCTCCCAGGTCGGAGATaGGGGCATGAGAGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: LCGNSGSQQPLTQQGLAFLPGRR*GHESPE
Trigger: TTCTGGACTCTCATGCCCCCATCTCCGACCTGGGAG...AAAGGCCAGACCCTGCTGAGTTAGAGGCTGCTGGGATCCACTGTTTCCACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR GCA 90 bp GCAAGGCTCAACGCAAACATGGCACTTCTCTGCCACCTGTTCCCAGCAGCCTTCCACACCTTGGTGGTTTaGAAGGGATGGCTGTGCTGT +
Preference number: 2 (lower is better)
Translates to: ARLNANMALLCHLFPAAFHTLVV*KGWLCC
Trigger: ACAGCACAGCCATCCCTTGCAAACCACCAAGGTGTG...GAAGGCTGCTGGGAACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CCA 90 bp AGCTGGAAGAGCTGCAAGGCTCAACGCAAACATGGCACTTCTCTGCCACCTGTTGTGAGTGCTCCTCCCTaGAGGTCAGCCACACACCTT +
Preference number: 2 (lower is better)
Translates to: SWKSCKAQRKHGTSLPPVVSAPP*RSATHL
Trigger: AAGGTGTGTGGCTGACCTCCAGGGAGGAGCACTCAC...AACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCCTTGCAGCTCTTCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CCA 90 bp GAGCCAACCATGAGAACACAAAGGATCCCTCCCCATTCAGTCCCATCTCTGACTGCTGCGTTCGCCCCCTaGAAGCTCTTTCCTCCCCAT +
Preference number: 2 (lower is better)
Translates to: EPTMRTQRIPPHSVPSLTAAFAP*KLFPPH
Trigger: ATGGGGAGGAAAGAGCTTCCAGGGGGCGAACGCAGC...AGTCAGAGATGGGACTGAATGGGGAGGGATCCTTTGTGTTCTCATGGTTGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CCA 90 bp GAGCCAACCATGAGAACACAAAGGATCCCTCCCCATTCAGTCCCATCTCTGACTTCAGCTAGCACTCCTTaGGGCTCCTGCTGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: EPTMRTQRIPPHSVPSLTSASTP*GSCCSR
Trigger: CCTGCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGA...AGTCAGAGATGGGACTGAATGGGGAGGGATCCTTTGTGTTCTCATGGTTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CCA 90 bp AGCTGGAAGAGCTGCAAGGCTCAACGCAAACATGGCACTTCTCTGCCACCTGTTTCAGCAAGGATGGCCTaGAACCCAGGTGATCCCCTC +
Preference number: 2 (lower is better)
Translates to: SWKSCKAQRKHGTSLPPVSARMA*NPGDPL
Trigger: GAGGGGATCACCTGGGTTCCAGGCCATCCTTGCTGA...AACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCCTTGCAGCTCTTCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR CAA 90 bp CCAGTGAGTGCTCCTCCCTGGAGGTCAGCCACACACCTTGGTGGTTaGCAAGGGATGGCTGTGCTGTCTCCCTGTCCTATAAAAAGTTCT +
Preference number: 2 (lower is better)
Translates to: PVSAPPWRSATHLGG*QGMAVLSPCPIKSS
Trigger: AGAACTTTTTATAGGACAGGGAGACAGCACAGCCATCCCTTGCAAACCACCAAGGTGTGTGGCTGACCTCCAGGGAGGAGCACTCACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR GCA 90 bp GAGCCAACCATGAGAACACAAAGGATCCCTCCCCATTCAGTCCCATCTCTGACTGAACGCCGGCCTGTCTaGAAGGTACACACAGCAGTG +
Preference number: 2 (lower is better)
Translates to: EPTMRTQRIPPHSVPSLTERRPV*KVHTAV
Trigger: CACTGCTGTGTGTACCTTGCAGACAGGCCGGCGTTC...AGTCAGAGATGGGACTGAATGGGGAGGGATCCTTTGTGTTCTCATGGTTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CCA 90 bp AGCTGGAAGAGCTGCAAGGCTCAACGCAAACATGGCACTTCTCTGCCACCTGTTGTCAGCCACACACCTTaGTGGTTTGCAAGGGATGGC +
Preference number: 2 (lower is better)
Translates to: SWKSCKAQRKHGTSLPPVVSHTP*WFARDG
Trigger: GCCATCCCTTGCAAACCACCAAGGTGTGTGGCTGAC...AACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCCTTGCAGCTCTTCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR TCA 90 bp AGCTGGAAGAGCTGCAAGGCTCAACGCAAACATGGCACTTCTCTGCCACCTGTTAAGTCTCCAGCTCCTTaGGAAACCTCCACCATCCTG +
Preference number: 2 (lower is better)
Translates to: SWKSCKAQRKHGTSLPPVKSPAP*ETSTIL
Trigger: CAGGATGGTGGAGGTTTCTCAAGGAGCTGGAGACTT...AACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCCTTGCAGCTCTTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CCA 90 bp TTCCAATACTGGATAAATGGGAACAACTTCGGCCTCCTCCCCTTTTCAAATATCCCCGAGGGCAGTGCTTaGGCAGCAACAAGGGGAGCG +
Preference number: 2 (lower is better)
Translates to: FQYWINGNNFGLLPFSNIPEGSA*AATRGA
Trigger: CGCTCCCCTTGTTGCTGCCCAAGCACTGCCCTCGGG...GATATTTGAAAAGGGGAGGAGGCCGAAGTTGTTCCCATTTATCCAGTATTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR TCA 90 bp CTGTGTGGAAACAGTGGATCCCAGCAGCCTCTAACTCAGCAGGGTCTGGCCTTTGTCCAGAAAACTGGGTaGAGCTGCCTTTCACATAAT +
Preference number: 2 (lower is better)
Translates to: LCGNSGSQQPLTQQGLAFVQKTG*SCLSHN
Trigger: ATTATGTGAAAGGCAGCTTCACCCAGTTTTCTGGAC...AAAGGCCAGACCCTGCTGAGTTAGAGGCTGCTGGGATCCACTGTTTCCACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CCA 90 bp TTTTTCCTGCAGAAGTACACGAGCCTAACCAAAGACAGGCTTTCCTGGTCCCAGGGCTCAACGCAAACATaGCACTTCTCTGCCACCTGT +
Preference number: 2 (lower is better)
Translates to: FFLQKYTSLTKDRLSWSQGSTQT*HFSATC
Trigger: ACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCC...CTGGGACCAGGAAAGCCTGTCTTTGGTTAGGCTCGTGTACTTCTGCAGGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR CCA 72 bp GGACCACCCCAGCAACCACCCTCAGCTAGCACTCCTTaGGGCTCCTGCTGCAGCAGGTGGGGGCACCAGGCC +
Preference number: 3 (lower is better)
Translates to: GPPQQPPSASTP*GSCCSRWGHQA
Trigger: GGCCTGGTGCCCCCACCTGCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTGGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR CCA 72 bp CCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTGCTTaGGCAGCAACAAGGGGAGCGGCAATGGCAGAGCAG +
Preference number: 3 (lower is better)
Translates to: PTSGCQTPEGSA*AATRGAAMAEQ
Trigger: CTGCTCTGCCATTGCCGCTCCCCTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR GCA 72 bp TCCACCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTaGTTGGGCAGCAACAAGGGGAGCGGCAATGGCAGA +
Preference number: 3 (lower is better)
Translates to: STHLRLPDARGQ*LGSNKGSGNGR
Trigger: TCTGCCATTGCCGCTCCCCTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR GCA 72 bp CTATCCAGAACACTGTCCCCTCCACCCACCTCAGGCTaGCAGACGCCCGAGGGCAGTGCTTGGGCAGCAACA +
Preference number: 3 (lower is better)
Translates to: LSRTLSPPPTSG*QTPEGSAWAAT
Trigger: TGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGGTGGAGGGGACAGTGTTCTGGATAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CAA 90 bp CTAACTCAGCAGGGTCTGGCCTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGAGGGGGAGTGAGCCCCTaGGAGGCTGAACGCCGGCCT +
Preference number: 3 (lower is better)
Translates to: LTQQGLAFSAPTGRQAQRGGVSP*EAERRP
Trigger: AGGCCGGCGTTCAGCCTCCAAGGGGCTCACTCCCCC...TCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAGGCCAGACCCTGCTGAGTTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR CCA 72 bp CCACCGGAAGGCAGGCTCAAAGATGCTCAGCAAGGATaGCCTGGAACCCAGGTGATCCCCTCCCACCACCCT +
Preference number: 3 (lower is better)
Translates to: PPEGRLKDAQQG*PGTQVIPSHHP
Trigger: AGGGTGGTGGGAGGGGATCACCTGGGTTCCAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCCTTCCGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CAA 90 bp CACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCAGGTACACACCTTGGTGGTTaGCAAGGGATGGCTGTGCTG +
Preference number: 3 (lower is better)
Translates to: HPSNHPQLALLGAPAAAGTHLGG*QGMAVL
Trigger: CAGCACAGCCATCCCTTGCAAACCACCAAGGTGTGT...ACCTGCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR TCA 72 bp GACAGAGAGATCCACAGTGTTTGGCAACTGGGGGAGTaGGCCCCTTGGAGGCTGAACGCCGGCCTGTCTGCA +
Preference number: 3 (lower is better)
Translates to: DREIHSVWQLGE*APWRLNAGLSA
Trigger: TGCAGACAGGCCGGCGTTCAGCCTCCAAGGGGCTCACTCCCCCAGTTGCCAAACACTGTGGATCTCTCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR TCA 72 bp CTGCCAGCCCCACCAGGCTGGGTAGGTTGTCATTCCTaGAGTCTCCCAGGTCGGAGATGGGGGCATGAGAGT +
Preference number: 3 (lower is better)
Translates to: LPAPPGWVGCHS*SLPGRRWGHES
Trigger: ACTCTCATGCCCCCATCTCCGACCTGGGAGACTTCAGGAATGACAACCTACCCAGCCTGGTGGGGCTGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR GCA 72 bp AGGTTCCCAGACAAGTGGAGCAGGCCTCTTCCTCTGTaGTGCGTTCGCCCCCTGGAAGCTCTTTCCTCCCCA +
Preference number: 3 (lower is better)
Translates to: RFPDKWSRPLPL*CVRPLEALSSP
Trigger: TGGGGAGGAAAGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTGTCTGGGAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR CCA 72 bp CCTGTTCCCAGCAGCCTTCCCGCTGTGTGGAAACAGTaGATCCCAGCAGCCTCTAACTCAGCAGGGTCTGGC +
Preference number: 3 (lower is better)
Translates to: PVPSSLPAVWKQ*IPAASNSAGSG
Trigger: GCCAGACCCTGCTGAGTTAGAGGCTGCTGGGATCCACTGTTTCCACACAGCGGGAAGGCTGCTGGGAACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CAA 90 bp TCCTCTGTGCCTCCTGCCCAGGTTCCCAGACAAGTGGAGCAGGCCTCTTCCTCTGGTCAGCCACACACCTaGGTGGTTTGCAAGGGATGG +
Preference number: 3 (lower is better)
Translates to: SSVPPAQVPRQVEQASSSGQPHT*VVCKGW
Trigger: CCATCCCTTGCAAACCACCAAGGTGTGTGGCTGACC...AGAGGAAGAGGCCTGCTCCACTTGTCTGGGAACCTGGGCAGGAGGCACAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR GCA 72 bp GCCTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGATaGTCAGCAAGGATGGCCTGGAACCCAGGTGATCCC +
Preference number: 3 (lower is better)
Translates to: AFSAPTGRQAQR*SARMAWNPGDP
Trigger: GGGATCACCTGGGTTCCAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR GCA 72 bp CCAGCAGCCTCTAACTCAGCAGGGTCTGGCCTTTTCTaGTCCCACCGGAAGGCAGGCTCAAAGATGCTCAGC +
Preference number: 3 (lower is better)
Translates to: PAASNSAGSGLF*SHRKAGSKMLS
Trigger: GCTGAGCATCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAGGCCAGACCCTGCTGAGTTAGAGGCTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR CCA 72 bp GTGCACCTTGTGAGCACTCCAGTGAGTGCTCCTCCCTaGAGGTCAGCCACACACCTTGGTGGTTTGCAAGGG +
Preference number: 3 (lower is better)
Translates to: VHLVSTPVSAPP*RSATHLGGLQG
Trigger: CCCTTGCAAACCACCAAGGTGTGTGGCTGACCTCCAGGGAGGAGCACTCACTGGAGTGCTCACAAGGTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR CCA 72 bp CCCCAGCTGGAAGAGCTGCAAGGCTCAACGCAAACATaGCACTTCTCTGCCACCTGTTCCCAGCAGCCTTCC +
Preference number: 3 (lower is better)
Translates to: PQLEELQGSTQT*HFSATCSQQPS
Trigger: GGAAGGCTGCTGGGAACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCCTTGCAGCTCTTCCAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR TCA 72 bp ACGAGCCTAACCAAAGACAGGCTTTCCTGGTCCCAGTaGGCCAAGCAAGGTGGACAGCCTCCTCACTGTTCA +
Preference number: 3 (lower is better)
Translates to: TSLTKDRLSWSQ*AKQGGQPPHCS
Trigger: TGAACAGTGAGGAGGCTGTCCACCTTGCTTGGCTCACTGGGACCAGGAAAGCCTGTCTTTGGTTAGGCTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CAA 90 bp TTCCAATACTGGATAAATGGGAACAACTTCGGCCTCCTCCCCTTTTCAAATATCGCCCGAGGGCAGTGCTaGGGCAGCAACAAGGGGAGC +
Preference number: 3 (lower is better)
Translates to: FQYWINGNNFGLLPFSNIARGQC*GSNKGS
Trigger: GCTCCCCTTGTTGCTGCCCAAGCACTGCCCTCGGGC...GATATTTGAAAAGGGGAGGAGGCCGAAGTTGTTCCCATTTATCCAGTATTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CAA 90 bp TTTTTCCTGCAGAAGTACACGAGCCTAACCAAAGACAGGCTTTCCTGGTCCCAGAGAGATCCACAGTGTTaGGCAACTGGGGGAGTGAGC +
Preference number: 3 (lower is better)
Translates to: FFLQKYTSLTKDRLSWSQRDPQC*ATGGVS
Trigger: GCTCACTCCCCCAGTTGCCAAACACTGTGGATCTCT...CTGGGACCAGGAAAGCCTGTCTTTGGTTAGGCTCGTGTACTTCTGCAGGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR TCA 72 bp AGAGGTGATGTGATCAGCCAGTGGTCCCAACACAGCTaGAAGTCAGAGCCAACCATGAGAACACAAAGGATC +
Preference number: 3 (lower is better)
Translates to: RGDVISQWSQHS*KSEPTMRTQRI
Trigger: GATCCTTTGTGTTCTCATGGTTGGCTCTGACTTTCAGCTGTGTTGGGACCACTGGCTGATCACATCACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR-3UTR CAA 90 bp TTCCAATACTGGATAAATGGGAACAACTTCGGCCTCCTCCCCTTTTCAAATATCACCAGGCTGGGTAGGTaGTCATTCCTGAAGTCTCCC +
Preference number: 3 (lower is better)
Translates to: FQYWINGNNFGLLPFSNITRLGR*SFLKSP
Trigger: GGGAGACTTCAGGAATGACAACCTACCCAGCCTGGT...GATATTTGAAAAGGGGAGGAGGCCGAAGTTGTTCCCATTTATCCAGTATTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp GGACCACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCCGGCTGCCGCTTCCCTaGGCTGGGCTCTCCGGTCGG +
Preference number: 4 (lower is better)
Translates to: GPPQQPPSASTPWGSCCSRLPLP*AGLSGR
Trigger: CCGACCGGAGAGCCCAGCCCAGGGAAGCGGCAGCCG...GCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTGGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp TCCACCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTGCTTGGGCAGCAACAAGGCCGCTTCCCTGGGCTaGGCTCTCCGGTCGGATACC +
Preference number: 4 (lower is better)
Translates to: STHLRLPDARGQCLGSNKAASLG*ALRSDT
Trigger: GGTATCCGACCGGAGAGCCCAGCCCAGGGAAGCGGC...CTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp TCCACCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTGCTTGGGCAGCAACAAGGAGCCCCTTGGAGGCTaGACGCCGGCCTGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: STHLRLPDARGQCLGSNKEPLGG*TPACLQ
Trigger: TTGCAGACAGGCCGGCGTTCAGCCTCCAAGGGGCTC...CTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp TCCACCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTGCTTGGGCAGCAACAAGGACGCCCGAGGGCAGTaGTTGGGCAGCAACAAGGGG +
Preference number: 4 (lower is better)
Translates to: STHLRLPDARGQCLGSNKDARGQ*LGSNKG
Trigger: CCCCTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTC...CTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCAGGTCCTTGGGGCTCCTGCTaGAGCAGGTGGGGGCACCAG +
Preference number: 4 (lower is better)
Translates to: HPSNHPQLALLGAPAAAGPWGSC*SRWGHQ
Trigger: CTGGTGCCCCCACCTGCTGCAGCAGGAGCCCCAAGG...ACCTGCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp AGACAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTAGGTGGCTCCGGAGGTaGGCAGGCCAGGCGGACCCG +
Preference number: 4 (lower is better)
Translates to: RQVEQASSSVLRSPPGSSRWLRR*AGQADP
Trigger: CGGGTCCGCCTGGCCTGCCCACCTCCGGAGCCACCT...AGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTGCTTGGGCAGCAACAAGGGGACGTCCTCACCATGGATaGCCACAGCATGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PTSGCQTPEGSAWAATRGRPHHG*PQHGAP
Trigger: GGGAGCCCCATGCTGTGGCCATCCATGGTGAGGACG...TCCCCTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR CAA 72 bp ACCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTGCTaGGGCAGCAACAAGGGGAGCGGCAATGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: THLRLPDARGQC*GSNKGSGNGRA
Trigger: TGCTCTGCCATTGCCGCTCCCCTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp TCCACCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTGCTTGGGCAGCAACAAGGCGTCATGGTCTCGCTaGCAGTGTCCAGCGCTGCGT +
Preference number: 4 (lower is better)
Translates to: STHLRLPDARGQCLGSNKASWSR*QCPALR
Trigger: ACGCAGCGCTGGACACTGTCAGCGAGACCATGACGC...CTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGGTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp TGTGAGCACTCCAGTGAGTGCTCCTCCCTGGAGGTCAGCCACACACCTTGGTGGGTGCTGCGCCCGAACTaGGGGCGCCGAGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: CEHSSECSSLEVSHTPWWVLRPN*GRRVRQ
Trigger: CTGCCTGACTCGGCGCCCGCAGTTCGGGCGCAGCAC...CCACCAAGGTGTGTGGCTGACCTCCAGGGAGGAGCACTCACTGGAGTGCTCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp GGACCACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCGGCCCTCAAATGGGGTaGCTGCCGAGACCGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GPPQQPPSASTPWGSCCSGPQMG*LPRPSA
Trigger: AGCAGACGGTCTCGGCAGGCACCCCATTTGAGGGCC...GCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTTTCCAGACACCCCAGGCCTaGGTGGGGCCCTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QVEQASSSVLRSPPGSSFQTPQA*VGPCGW
Trigger: CCACCCACAGGGCCCCACGCAGGCCTGGGGTGTCTG...GAAAGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTGCTTGGGCAGCAACAAGGGGACCTCTTCCTCTGTGCTaGGTTCGCCCCCTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: PTSGCQTPEGSAWAATRGPLPLC*VRPLEA
Trigger: AGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGG...TCCCCTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp TGGAGGCTGAACGCCGGCCTGTCTGCAAGGTACACACAGCAGTGTGCACCTTGTTGCTCCCCAGGGCCTTaGCGCTGGGCTGGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: WRLNAGLSARYTQQCAPCCSPGP*RWAGPC
Trigger: GCACGGCCCAGCCCAGCGCCAAGGCCCTGGGGAGCA...ACAAGGTGCACACTGCTGTGTGTACCTTGCAGACAGGCCGGCGTTCAGCCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp TCCTCTGTGCCTCCTGCCCAGGTTCCCAGACAAGTGGAGCAGGCCTCTTCCTCTCAGTGCCTGGGTCCTTaGAGAGGGCGGCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSVPPAQVPRQVEQASSSQCLGP*RGRPAG
Trigger: CCCTGCGGGCCGCCCTCTCCAAGGACCCAGGCACTG...AGAGGAAGAGGCCTGCTCCACTTGTCTGGGAACCTGGGCAGGAGGCACAGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp CACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCAGGTTGCGGTGAAGCAGGATaGGGGTGCCCAGGACCATGC +
Preference number: 4 (lower is better)
Translates to: HPSNHPQLALLGAPAAAGCGEAG*GCPGPC
Trigger: GCATGGTCCTGGGCACCCTCATCCTGCTTCACCGCA...ACCTGCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp AGACAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTAGCCACAGGGCCTGCTaGGCTCAGCGTCACGGGCAG +
Preference number: 4 (lower is better)
Translates to: RQVEQASSSVLRSPPGSSSHRAC*AQRHGQ
Trigger: CTGCCCGTGACGCTGAGCTCAGCAGGCCCTGTGGCT...AGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp CACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCAGGTTGGCAACTGGGGGAGTaGGCCCCTTGGAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: HPSNHPQLALLGAPAAAGWQLGE*APWRLN
Trigger: GTTCAGCCTCCAAGGGGCTCACTCCCCCAGTTGCCA...ACCTGCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCAGGTACAGTGAGCCCACCCTaGACCTGCCGGAAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: HPSNHPQLALLGAPAAAGTVSPP*TCRKLG
Trigger: CCCCAACTTCCGGCAGGTGCAGGGTGGGCTCACTGT...ACCTGCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTGCTTGGGCAGCAACAAGGGGATTCGATGCCACCTCCTaGATCCAGGTGCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: PTSGCQTPEGSAWAATRGFDATS*IQVLKG
Trigger: GCCCTTCAGCACCTGGATGCAGGAGGTGGCATCGAA...TCCCCTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCAGGTGCCGAGACCGTCTGCTaGGCTGTGCTGGCCGTTGTA +
Preference number: 4 (lower is better)
Translates to: HPSNHPQLALLGAPAAAGAETVC*AVLAVV
Trigger: TACAACGGCCAGCACAGCCCAGCAGACGGTCTCGGC...ACCTGCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTGCTTGGGCAGCAACAAGGGGAAAGTCGTCCTCACCATaGATGGCCACAGCATGGGGC +
Preference number: 4 (lower is better)
Translates to: PTSGCQTPEGSAWAATRGKSSSP*MATAWG
Trigger: GCCCCATGCTGTGGCCATCCATGGTGAGGACGACTT...TCCCCTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCAGGTGGACCATGCCCAGGTTaGTCCTGCCCACGCCCATCT +
Preference number: 4 (lower is better)
Translates to: HPSNHPQLALLGAPAAAGGPCPG*SCPRPS
Trigger: AGATGGGCGTGGGCAGGACCAACCTGGGCATGGTCC...ACCTGCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp AGACAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTCGTGGGGGCAGCCTCTaGCTGGGAGGTGGTCCCACT +
Preference number: 4 (lower is better)
Translates to: RQVEQASSSVLRSPPGSSRGGSL*LGGGPT
Trigger: AGTGGGACCACCTCCCAGCCAGAGGCTGCCCCCACG...AGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CCAGTCCCCAGCTGGAAGAGCTGCAAGGCTCAACGCAAACATGGCACTTCTCTGGGGCCGTGCCGTAGATaGGCATGCGGGGCACCCGCC +
Preference number: 4 (lower is better)
Translates to: PVPSWKSCKAQRKHGTSLGPCRR*ACGAPA
Trigger: GGCGGGTGCCCCGCATGCCCATCTACGGCACGGCCC...CAGAGAAGTGCCATGTTTGCGTTGAGCCTTGCAGCTCTTCCAGCTGGGGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCAGGTCAGGCCCTGCGGTGCTaGCTGAAGACCTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: HPSNHPQLALLGAPAAAGQALRC*LKTSCM
Trigger: CATGCAGGAGGTCTTCAGCCAGCACCGCAGGGCCTG...ACCTGCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CCAGTCCCCAGCTGGAAGAGCTGCAAGGCTCAACGCAAACATGGCACTTCTCTGGCGAGAGGGAGCCCGTaGTCACCGGCGACGGGACCT +
Preference number: 4 (lower is better)
Translates to: PVPSWKSCKAQRKHGTSLARGSP*SPATGP
Trigger: AGGTCCCGTCGCCGGTGAGCACGGGCTCCCTCTCGC...CAGAGAAGTGCCATGTTTGCGTTGAGCCTTGCAGCTCTTCCAGCTGGGGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp TGTGAGCACTCCAGTGAGTGCTCCTCCCTGGAGGTCAGCCACACACCTTGGTGGGGGTGCCCAGGACCATaGCCAGGTTGGTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: CEHSSECSSLEVSHTPWWGCPGP*PGWSCP
Trigger: TGGGCAGGACCAACCTGGGCATGGTCCTGGGCACCC...CCACCAAGGTGTGTGGCTGACCTCCAGGGAGGAGCACTCACTGGAGTGCTCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTGCTTGGGCAGCAACAAGGGGATTCCCTGGGGCACCATaGGGAGAAAGCTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: PTSGCQTPEGSAWAATRGFPGAP*GESSGS
Trigger: TGATCCAGAGCTTTCTCCGCATGGTGCCCCAGGGAA...TCCCCTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp ACCCTCAGTGCACCCTTGCACACCTCACTGTCCATGAGGACCACCCCAGCAACCTGCCGTAGATGGGCATaGGGGGCACCCGCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: TLSAPLHTSLSMRTTPATCRRWA*GAPAGS
Trigger: ACTTCCGGCGGGTGCCCCGCATGCCCATCTACGGCA...GGTTGCTGGGGTGGTCCTCATGGACAGTGAGGTGTGCAAGGGTGCACTGAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp ACTGTCCATGAGGACCACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTTCAGGGGGCCCTCCTTaGCTGGGGGAGGCTCGCTTA +
Preference number: 4 (lower is better)
Translates to: TVHEDHPSNHPQLALLGASGGPP*LGEARL
Trigger: TAAGCGAGCCTCCCCCAGGCAAGGAGGGCCCCCTGA...AGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTGGTCCTCATGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp TCCTCTGTGCCTCCTGCCCAGGTTCCCAGACAAGTGGAGCAGGCCTCTTCCTCTGGACAGGCCCTGCGGTaGTGGCTGAAGACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SSVPPAQVPRQVEQASSSGQALR*WLKTSC
Trigger: GCAGGAGGTCTTCAGCCAGCACCGCAGGGCCTGTCC...AGAGGAAGAGGCCTGCTCCACTTGTCTGGGAACCTGGGCAGGAGGCACAGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp GGCAGGCTCAAAGATGCTCAGCAAGGATGGCCTGGAACCCAGGTGATCCCCTCCCAGAGGGCTCGAGGCTaGAGCTCTGCTCCTGCCACC +
Preference number: 4 (lower is better)
Translates to: GRLKDAQQGWPGTQVIPSQRARG*SSAPAT
Trigger: GGTGGCAGGAGCAGAGCTGCAGCCTCGAGCCCTCTG...GGAGGGGATCACCTGGGTTCCAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTTTCGCACCTGCCGGAAGTTaGGGGCCCCACAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: QVEQASSSVLRSPPGSSFAPAGS*GPHSFP
Trigger: TGGGAAGCTGTGGGGCCCCCAACTTCCGGCAGGTGC...GAAAGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp GGCAGGCTCAAAGATGCTCAGCAAGGATGGCCTGGAACCCAGGTGATCCCCTCCCGGTACAGCTCAGGGTaGGCACACAGCCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GRLKDAQQGWPGTQVIPSRYSSG*AHSQRL
Trigger: CAGCCGCTGGCTGTGTGCCCACCCTGAGCTGTACCG...GGAGGGGATCACCTGGGTTCCAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp AGACAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTTCCAGGGTCTCCAGCTaGTCAGGAGCCACAGGGGGC +
Preference number: 4 (lower is better)
Translates to: RQVEQASSSVLRSPPGSSSRVSS*SGATGG
Trigger: GCCCCCTGTGGCTCCTGACCAGCTGGAGACCCTGGA...AGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTTTCAGCCTGGAGAAGGGCTaGTCCTCCCCGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QVEQASSSVLRSPPGSSFSLEKG*SSPLSS
Trigger: GCTGGAGAGCGGGGAGGACCAGCCCTTCTCCAGGCT...GAAAGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp TGTGAGCACTCCAGTGAGTGCTCCTCCCTGGAGGTCAGCCACACACCTTGGTGGACCGGTAGCGCAGCCTaGAGAAGGGCTGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: CEHSSECSSLEVSHTPWWTGSAA*RRAGPP
Trigger: GGGAGGACCAGCCCTTCTCCAGGCTGCGCTACCGGT...CCACCAAGGTGTGTGGCTGACCTCCAGGGAGGAGCACTCACTGGAGTGCTCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp GGACCACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCCCTTGCAGTTGTACGTaGTCACAACAGGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: GPPQQPPSASTPWGSCCSPCSCT*SQQGPP
Trigger: AGGTGGCCCCTGTTGTGATCACGTACAACTGCAAGG...GCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp ACTGTCCATGAGGACCACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCTCAAATGGGGTGCCTaGCGAGACCGTCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TVHEDHPSNHPQLALLGALKWGA*RDRLLG
Trigger: GCCCAGCAGACGGTCTCGGCAGGCACCCCATTTGAG...AGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTGGTCCTCATGGACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp TCCTCTGTGCCTCCTGCCCAGGTTCCCAGACAAGTGGAGCAGGCCTCTTCCTCTGCCGACTGTCCATCGTaGCACTGCCCTGTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SSVPPAQVPRQVEQASSSADCPS*HCPVGP
Trigger: AGGGCCTACAGGGCAGTGGCACGATGGACAGTCGGC...AGAGGAAGAGGCCTGCTCCACTTGTCTGGGAACCTGGGCAGGAGGCACAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp AGTGAGTGCTCCTCCCTGGAGGTCAGCCACACACCTTGGTGGTTTGCAAGGGATAGCCCACCCTGCACCTaGCGGAAGTTGGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SECSSLEVSHTPWWFARDSPPCT*RKLGAP
Trigger: TGGGGCCCCCAACTTCCGGCAGGTGCAGGGTGGGCT...ATCCCTTGCAAACCACCAAGGTGTGTGGCTGACCTCCAGGGAGGAGCACTCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CTGTGTGGAAACAGTGGATCCCAGCAGCCTCTAACTCAGCAGGGTCTGGCCTTTCGCTGGGCTGGGCCGTaGCGTAGATGGGCATGCGGG +
Preference number: 4 (lower is better)
Translates to: LCGNSGSQQPLTQQGLAFRWAGP*RRWACG
Trigger: CCCGCATGCCCATCTACGGCACGGCCCAGCCCAGCG...AAAGGCCAGACCCTGCTGAGTTAGAGGCTGCTGGGATCCACTGTTTCCACACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CCAGTCCCCAGCTGGAAGAGCTGCAAGGCTCAACGCAAACATGGCACTTCTCTGGCCGGGTCTGCTCTGTaGCAGGGGCTGCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: PVPSWKSCKAQRKHGTSLAGSAL*QGLPGQ
Trigger: TTGGCCTGGCAGCCCCTGGCACAGAGCAGACCCGGC...CAGAGAAGTGCCATGTTTGCGTTGAGCCTTGCAGCTCTTCCAGCTGGGGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGATGCTCAGCAAGGATGGCCTGACCAGTGGCCGGGTCTaGTCTGTGCCAGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LFCSHRKAGSKMLSKDGLTSGRV*SVPGAA
Trigger: GGCAGCCCCTGGCACAGAGCAGACCCGGCCACTGGT...CAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp GCAAGGCTCAACGCAAACATGGCACTTCTCTGCCACCTGTTCCCAGCAGCCTTCCCACCCACCTCAGGCTaGCAGACGCCCGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: ARLNANMALLCHLFPAAFPPTSG*QTPEGS
Trigger: ACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGGTGG...GAAGGCTGCTGGGAACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCAGGTGTGCTCTGGAAGGAGTaGATGCTGACGGAGTGCCGA +
Preference number: 4 (lower is better)
Translates to: HPSNHPQLALLGAPAAAGVLWKE*MLTECR
Trigger: TCGGCACTCCGTCAGCATCCACTCCTTCCAGAGCAC...ACCTGCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGATGCTCAGCAAGGATGGCCTGGCTGAAGACGAGGGCTaGGGGAGGCCCGTGGGCATC +
Preference number: 4 (lower is better)
Translates to: LFCSHRKAGSKMLSKDGLAEDEG*GRPVGI
Trigger: GATGCCCACGGGCCTCCCCCAGCCCTCGTCTTCAGC...CAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTTTCCTGCCCACGCCCATCTaGCAGCTGAAGACGAGGGCT +
Preference number: 4 (lower is better)
Translates to: QVEQASSSVLRSPPGSSFLPTPI*QLKTRA
Trigger: AGCCCTCGTCTTCAGCTGCCAGATGGGCGTGGGCAG...GAAAGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTGCTTGGGCAGCAACAAGGGGAATGCGGAGAAAGCTCTaGATCACCTGGAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: PTSGCQTPEGSAWAATRGMRRKL*ITWNCS
Trigger: GGAGCAGTTCCAGGTGATCCAGAGCTTTCTCCGCAT...TCCCCTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp AGACAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTTCCGCAGCCTCCTCTTaGCGTCCGTCAGGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: RQVEQASSSVLRSPPGSSSAASS*RPSGRP
Trigger: TGGCCTACCTGACGGACGCCAAGAGGAGGCTGCGGA...AGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTGCTTGGGCAGCAACAAGGGGAGCTGTGTGGAAACAGTaGATCCCAGCAGCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: PTSGCQTPEGSAWAATRGAVWKQ*IPAASN
Trigger: GTTAGAGGCTGCTGGGATCCACTGTTTCCACACAGC...TCCCCTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp GCAAGGCTCAACGCAAACATGGCACTTCTCTGCCACCTGTTCCCAGCAGCCTTCCCATGCCGAACACAGTaGGCCCACCCTGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: ARLNANMALLCHLFPAAFPCRTQ*AHPAPA
Trigger: GGCAGGTGCAGGGTGGGCTCACTGTGTTCGGCATGG...GAAGGCTGCTGGGAACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp CTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGATGCTCAGCAAGGATGGCCTGGACCCGCCTGAACCCTaGGAGGCTGGGCTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: LFCSHRKAGSKMLSKDGLDPPEP*EAGLSH
Trigger: ATGGGACAGCCCAGCCTCTCAGGGTTCAGGCGGGTC...CAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp CTAACTCAGCAGGGTCTGGCCTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGATCTGGAGGACCCGCCTaGACCCTGAGAGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LTQQGLAFSAPTGRQAQRSGGPA*TLRGWA
Trigger: AGCCCAGCCTCTCAGGGTTCAGGCGGGTCCTCCAGA...TCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAGGCCAGACCCTGCTGAGTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp TCCACCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTGCTTGGGCAGCAACAAGTGGTCCCAACACAGCTaGAAGTCAGAGCCAACCATG +
Preference number: 4 (lower is better)
Translates to: STHLRLPDARGQCLGSNKWSQHS*KSEPTM
Trigger: CATGGTTGGCTCTGACTTTCAGCTGTGTTGGGACCA...CTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp GAGCCAACCATGAGAACACAAAGGATCCCTCCCCATTCAGTCCCATCTCTGACTTCAGGACCCCAGACCTaGCAGCCCGCGGCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: EPTMRTQRIPPHSVPSLTSGPQT*QPAAPG
Trigger: CCCCGGAGCCGCGGGCTGGCAGGTCTGGGGTCCTGA...AGTCAGAGATGGGACTGAATGGGGAGGGATCCTTTGTGTTCTCATGGTTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGATGCTCAGCAAGGATGGCCTGTGCCCAGGTTGGTCCTaGCCACGCCCATCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LFCSHRKAGSKMLSKDGLCPGWS*PRPSGS
Trigger: GCTGCCAGATGGGCGTGGGCAGGACCAACCTGGGCA...CAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CTGTGTGGAAACAGTGGATCCCAGCAGCCTCTAACTCAGCAGGGTCTGGCCTTTAGACGCTGTGTCGGCTaGCGCTTCCCTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LCGNSGSQQPLTQQGLAFRRCVG*RFPGLG
Trigger: GCCCAGCCCAGGGAAGCGGCAGCCGACACAGCGTCT...AAAGGCCAGACCCTGCTGAGTTAGAGGCTGCTGGGATCCACTGTTTCCACACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGATGCTCAGCAAGGATGGCCTGTCAGGTAGGCCAGGATaGTCCCCAGGGCCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: LFCSHRKAGSKMLSKDGLSGRPG*SPGPWR
Trigger: GCGCCAAGGCCCTGGGGAGCATCCTGGCCTACCTGA...CAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp GGCAGGCTCAAAGATGCTCAGCAAGGATGGCCTGGAACCCAGGTGATCCCCTCCTTGCGCCTCTTTCGCTaGCTTCGCCTGGCGGTAGGT +
Preference number: 4 (lower is better)
Translates to: GRLKDAQQGWPGTQVIPSLRLFR*LRLAVG
Trigger: ACCTACCGCCAGGCGAAGGCAGCGAAAGAGGCGCAA...GGAGGGGATCACCTGGGTTCCAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTTTCCTCTGTGCCAGGGGCTaGCAGGCCAATCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: QVEQASSSVLRSPPGSSFLCARG*QANLRE
Trigger: CTCTCTCAGATTGGCCTGGCAGCCCCTGGCACAGAG...GAAAGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CCAGTCCCCAGCTGGAAGAGCTGCAAGGCTCAACGCAAACATGGCACTTCTCTGCGGGACAGAGAGAGATaGCGGGGGACCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PVPSWKSCKAQRKHGTSLRDRER*RGTCSS
Trigger: GGAGCTGCAGGTCCCCCGGCATCTCTCTCTGTCCCG...CAGAGAAGTGCCATGTTTGCGTTGAGCCTTGCAGCTCTTCCAGCTGGGGACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGATGCTCAGCAAGGATGGCCTGGGAGCTGCAGCAGGCTaGGGGTCTCCCGGAGAACAC +
Preference number: 4 (lower is better)
Translates to: LFCSHRKAGSKMLSKDGLGAAAG*GSPGEH
Trigger: GTGTTCTCCGGGAGACCCCCAGCCTGCTGCAGCTCC...CAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp ACCCTCAGTGCACCCTTGCACACCTCACTGTCCATGAGGACCACCCCAGCAACCGCAGGAGTAAGGAAGTaGGGAGCTACCAGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: TLSAPLHTSLSMRTTPATAGVRK*GATSGR
Trigger: CCGGCCACTGGTAGCTCCCCACTTCCTTACTCCTGC...GGTTGCTGGGGTGGTCCTCATGGACAGTGAGGTGTGCAAGGGTGCACTGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp AGACAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTGCTGCGTTCGCCCCCTaGAAGCTCTTTCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: RQVEQASSSVLRSPPGSSAAFAP*KLFPPH
Trigger: ATGGGGAGGAAAGAGCTTCCAGGGGGCGAACGCAGC...AGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTTTCTCAGCTAGCACTCCTTaGGGCTCCTGCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QVEQASSSVLRSPPGSSFSASTP*GSCCSR
Trigger: CCTGCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGA...GAAAGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR CAA 72 bp GATCCACAGTGTTTGGCAACTGGGGGAGTGAGCCCCTaGGAGGCTGAACGCCGGCCTGTCTGCAAGGTACAC +
Preference number: 4 (lower is better)
Translates to: DPQCLATGGVSP*EAERRPVCKVH
Trigger: GTGTACCTTGCAGACAGGCCGGCGTTCAGCCTCCAAGGGGCTCACTCCCCCAGTTGCCAAACACTGTGGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp TCCTCTGTGCCTCCTGCCCAGGTTCCCAGACAAGTGGAGCAGGCCTCTTCCTCTACTCGGCACAGGCAGTaGTGGCTCTGTCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: SSVPPAQVPRQVEQASSSTRHRQ*WLCPPL
Trigger: AAGAGGTGGACAGAGCCATCACTGCCTGTGCCGAGT...AGAGGAAGAGGCCTGCTCCACTTGTCTGGGAACCTGGGCAGGAGGCACAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp CACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCAGGTGTAGGTTGTCATTCCTaGAGTCTCCCAGGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: HPSNHPQLALLGAPAAAGVGCHS*SLPGRR
Trigger: TCTCCGACCTGGGAGACTTCAGGAATGACAACCTAC...ACCTGCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp AGACAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTGGCAGAGAGGTGATGTaGTCAGCCAGTGGTCCCAAC +
Preference number: 4 (lower is better)
Translates to: RQVEQASSSVLRSPPGSSGREVM*SASGPN
Trigger: GTTGGGACCACTGGCTGATCACATCACCTCTCTGCC...AGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp TGTGAGCACTCCAGTGAGTGCTCCTCCCTGGAGGTCAGCCACACACCTTGGTGGGTTGTACCCATAGTCTaGCAGCAGCCTCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: CEHSSECSSLEVSHTPWWVVPIV*QQPQDP
Trigger: GGGGTCCTGAGGCTGCTGGCAGACTATGGGTACAAC...CCACCAAGGTGTGTGGCTGACCTCCAGGGAGGAGCACTCACTGGAGTGCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp TCCTCTGTGCCTCCTGCCCAGGTTCCCAGACAAGTGGAGCAGGCCTCTTCCTCTTGGATGCTGACGGAGTaGCGACTGTCCATCGTGCCA +
Preference number: 4 (lower is better)
Translates to: SSVPPAQVPRQVEQASSSWMLTE*RLSIVP
Trigger: TGGCACGATGGACAGTCGGCACTCCGTCAGCATCCA...AGAGGAAGAGGCCTGCTCCACTTGTCTGGGAACCTGGGCAGGAGGCACAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGATGCTCAGCAAGGATGGCCTGGTGCTGAAGGGCCTCTaGCAGGAGTCGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LFCSHRKAGSKMLSKDGLVLKGL*QESAFS
Trigger: GGAGAAGGCCGACTCCTGGCAGAGGCCCTTCAGCAC...CAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp TCCTCTGTGCCTCCTGCCCAGGTTCCCAGACAAGTGGAGCAGGCCTCTTCCTCTGATGCCAGCCTTCGATaGCACCTCCTGCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: SSVPPAQVPRQVEQASSSDASLR*HLLHPG
Trigger: ACCTGGATGCAGGAGGTGGCATCGAAGGCTGGCATC...AGAGGAAGAGGCCTGCTCCACTTGTCTGGGAACCTGGGCAGGAGGCACAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CCAGTCCCCAGCTGGAAGAGCTGCAAGGCTCAACGCAAACATGGCACTTCTCTGGGTGGTACCTGTAGGTaGGCTGCAGGAAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PVPSWKSCKAQRKHGTSLGGTCR*AAGRGA
Trigger: GGCCCCTCTTCCTGCAGCCCACCTACAGGTACCACC...CAGAGAAGTGCCATGTTTGCGTTGAGCCTTGCAGCTCTTCCAGCTGGGGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGATGCTCAGCAAGGATGGCCTGCCTCTGGCTGGGAGGTaGTCCCACTGCGGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LFCSHRKAGSKMLSKDGLPLAGR*SHCGEA
Trigger: TGCTTCACCGCAGTGGGACCACCTCCCAGCCAGAGG...CAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGATGCTCAGCAAGGATGGCCTGGGAGGCTCGCTTAGATaGGCCTTCAGCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LFCSHRKAGSKMLSKDGLGGSLR*AFSWAS
Trigger: GGAGGCCCAGCTGAAGGCCCATCTAAGCGAGCCTCC...CAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CTAACTCAGCAGGGTCTGGCCTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGAGTTGTGGTACGGCCCTaGCCGCTGAGGCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LTQQGLAFSAPTGRQAQRVVVRP*PLRQLN
Trigger: GTTCAGCTGCCTCAGCGGCCAGGGCCGTACCACAAC...TCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAGGCCAGACCCTGCTGAGTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp ACCCTCAGTGCACCCTTGCACACCTCACTGTCCATGAGGACCACCCCAGCAACCCAAGGGGAGCGGCAATaGCAGAGCAGCAGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: TLSAPLHTSLSMRTTPATQGERQ*QSSRSK
Trigger: CTTACTCCTGCTGCTCTGCCATTGCCGCTCCCCTTG...GGTTGCTGGGGTGGTCCTCATGGACAGTGAGGTGTGCAAGGGTGCACTGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp TGTGAGCACTCCAGTGAGTGCTCCTCCCTGGAGGTCAGCCACACACCTTGGTGGCTCCCAGGTCGGAGATaGGGGCATGAGAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: CEHSSECSSLEVSHTPWWLPGRR*GHESPE
Trigger: TTCTGGACTCTCATGCCCCCATCTCCGACCTGGGAG...CCACCAAGGTGTGTGGCTGACCTCCAGGGAGGAGCACTCACTGGAGTGCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp TGTGAGCACTCCAGTGAGTGCTCCTCCCTGGAGGTCAGCCACACACCTTGGTGGCCACCTTGTTGGGGATaGTGGACTTGGCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: CEHSSECSSLEVSHTPWWPPCWG*WTWPCC
Trigger: ACAGCAAGGCCAAGTCCATCATCCCCAACAAGGTGG...CCACCAAGGTGTGTGGCTGACCTCCAGGGAGGAGCACTCACTGGAGTGCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp CAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTTTCCCCGCACACAGAAGATaGCACACTCCCTATGTCCGT +
Preference number: 4 (lower is better)
Translates to: QVEQASSSVLRSPPGSSFPAHRR*HTPYVR
Trigger: ACGGACATAGGGAGTGTGTCATCTTCTGTGTGCGGG...GAAAGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp AGACAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTTCGGAGATGGGGGCATaGGAGTCCAGAAAACTGGGT +
Preference number: 4 (lower is better)
Translates to: RQVEQASSSVLRSPPGSSSEMGA*ESRKLG
Trigger: ACCCAGTTTTCTGGACTCTCATGCCCCCATCTCCGA...AGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp TGTGAGCACTCCAGTGAGTGCTCCTCCCTGGAGGTCAGCCACACACCTTGGTGGTGTCCATCGTGCCACTaGCCTGTAGGCCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: CEHSSECSSLEVSHTPWWCPSCH*PVGPQM
Trigger: CATTTGAGGGCCTACAGGGCAGTGGCACGATGGACA...CCACCAAGGTGTGTGGCTGACCTCCAGGGAGGAGCACTCACTGGAGTGCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp AGACAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTACCTCCTCCGTCACATaGAAGTCGTCCTCACCATGG +
Preference number: 4 (lower is better)
Translates to: RQVEQASSSVLRSPPGSSTSSVT*KSSSPW
Trigger: CCATGGTGAGGACGACTTGCATGTGACGGAGGAGGT...AGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp AGCTGGAAGAGCTGCAAGGCTCAACGCAAACATGGCACTTCTCTGCCACCTGTTCTCCACAGCGCCCTCTaGCAGACGCTGTGTCGGCTG +
Preference number: 4 (lower is better)
Translates to: SWKSCKAQRKHGTSLPPVLHSAL*QTLCRL
Trigger: CAGCCGACACAGCGTCTGGCAGAGGGCGCTGTGGAG...AACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCCTTGCAGCTCTTCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp TCCTCTGTGCCTCCTGCCCAGGTTCCCAGACAAGTGGAGCAGGCCTCTTCCTCTAGCCTCCGCATTTCTTaGGCCTCTTTCGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: SSVPPAQVPRQVEQASSSSLRIS*ASFAAF
Trigger: GAAGGCAGCGAAAGAGGCGCAAGAAATGCGGAGGCT...AGAGGAAGAGGCCTGCTCCACTTGTCTGGGAACCTGGGCAGGAGGCACAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CTAACTCAGCAGGGTCTGGCCTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGATGCAGGCTCCGCAGCTaGAGCCTCCGCATTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LTQQGLAFSAPTGRQAQRCRLRS*SLRISC
Trigger: GCAAGAAATGCGGAGGCTGCAGCTGCGGAGCCTGCA...TCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAGGCCAGACCCTGCTGAGTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp TCCACCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTGCTTGGGCAGCAACAAGAGCTCATCATGGATCTaGAACTCCTCCTTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: STHLRLPDARGQCLGSNKSSSWI*NSSLQL
Trigger: CAACTGCAAGGAGGAGTTCCAGATCCATGATGAGCT...CTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp AGACAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTCTATGTCCGTCCTTCTaGAGTTTCTGGAGGACCCGC +
Preference number: 4 (lower is better)
Translates to: RQVEQASSSVLRSPPGSSLCPSF*SFWRTR
Trigger: GCGGGTCCTCCAGAAACTCCAGAAGGACGGACATAG...AGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp GCAAGGCTCAACGCAAACATGGCACTTCTCTGCCACCTGTTCCCAGCAGCCTTCAGGGCCTCCAGCAGCTaGTCAAAGTCCTCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: ARLNANMALLCHLFPAAFRASSS*SKSSSR
Trigger: CCGAGAGGAGGACTTTGACCAGCTGCTGGAGGCCCT...GAAGGCTGCTGGGAACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp TGGAGGCTGAACGCCGGCCTGTCTGCAAGGTACACACAGCAGTGTGCACCTTGTTCAGCAAGGATGGCCTaGAACCCAGGTGATCCCCTC +
Preference number: 4 (lower is better)
Translates to: WRLNAGLSARYTQQCAPCSARMA*NPGDPL
Trigger: GAGGGGATCACCTGGGTTCCAGGCCATCCTTGCTGA...ACAAGGTGCACACTGCTGTGTGTACCTTGCAGACAGGCCGGCGTTCAGCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp AGACAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTAGCCTTCCCGCTGTGTaGAAACAGTGGATCCCAGCA +
Preference number: 4 (lower is better)
Translates to: RQVEQASSSVLRSPPGSSSLPAV*KQWIPA
Trigger: TGCTGGGATCCACTGTTTCCACACAGCGGGAAGGCT...AGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp AGACAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTGTGAGCCAAGCAAGGTaGACAGCCTCCTCACTGTTC +
Preference number: 4 (lower is better)
Translates to: RQVEQASSSVLRSPPGSSVSQAR*TASSLF
Trigger: GAACAGTGAGGAGGCTGTCCACCTTGCTTGGCTCAC...AGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp ACTGTCCATGAGGACCACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCATCCATCTTCTCAGTaGCATCCCGCACCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: TVHEDHPSNHPQLALLGAHPSSQ*HPAPGS
Trigger: ACTTCCTGGTGCGGGATGTCACTGAGAAGATGGATG...AGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTGGTCCTCATGGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp TTTTTCCTGCAGAAGTACACGAGCCTAACCAAAGACAGGCTTTCCTGGTCCCAGGGATGCGGTGGTAGGTaGGGCCAGGACAGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: FFLQKYTSLTKDRLSWSQGCGGR*GQDRPC
Trigger: GCAGGGCCTGTCCTGGCCTCACCTACCACCGCATCC...CTGGGACCAGGAAAGCCTGTCTTTGGTTAGGCTCGTGTACTTCTGCAGGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp ACCCTCAGTGCACCCTTGCACACCTCACTGTCCATGAGGACCACCCCAGCAACCGGTGGAGGTACGCGTTaGAGAGAATCAGGCAGACAT +
Preference number: 4 (lower is better)
Translates to: TLSAPLHTSLSMRTTPATGGGTR*RESGRH
Trigger: ATGTCTGCCTGATTCTCTTCAACGCGTACCTCCACC...GGTTGCTGGGGTGGTCCTCATGGACAGTGAGGTGTGCAAGGGTGCACTGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp AGCTGGAAGAGCTGCAAGGCTCAACGCAAACATGGCACTTCTCTGCCACCTGTTCCTGCATCCAGGTGCTaGAGGGCCTCTGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SWKSCKAQRKHGTSLPPVPASRC*RASARS
Trigger: ACTCCTGGCAGAGGCCCTTCAGCACCTGGATGCAGG...AACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCCTTGCAGCTCTTCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGATGCTCAGCAAGGATGGCCTGTCCTTCTTCACACGGTaGCCATCGGGTAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LFCSHRKAGSKMLSKDGLSFFTR*PSGSSC
Trigger: GCAGCTGCTACCCGATGGGCACCGTGTGAAGAAGGA...CAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CTAACTCAGCAGGGTCTGGCCTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGAGACAGTGTCCAGCGCTaGGTCCACCTCCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LTQQGLAFSAPTGRQAQRDSVQR*VHLLLH
Trigger: GTGAAGAAGGAGGTGGACGCAGCGCTGGACACTGTC...TCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAGGCCAGACCCTGCTGAGTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp AGACAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTCACACCTTGGTGGTTTaGAAGGGATGGCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RQVEQASSSVLRSPPGSSHTLVV*KGWLCC
Trigger: ACAGCACAGCCATCCCTTGCAAACCACCAAGGTGTG...AGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp TGGAGGCTGAACGCCGGCCTGTCTGCAAGGTACACACAGCAGTGTGCACCTTGTTTCCTCTGTGCCTCCTaGCCAGGTTCCCAGACAAGT +
Preference number: 4 (lower is better)
Translates to: WRLNAGLSARYTQQCAPCFLCAS*PGSQTS
Trigger: ACTTGTCTGGGAACCTGGGCAGGAGGCACAGAGGAA...ACAAGGTGCACACTGCTGTGTGTACCTTGCAGACAGGCCGGCGTTCAGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CCAGTCCCCAGCTGGAAGAGCTGCAAGGCTCAACGCAAACATGGCACTTCTCTGTCCCACCACCCTCAGTaGACCCTTGCACACCTCACT +
Preference number: 4 (lower is better)
Translates to: PVPSWKSCKAQRKHGTSLSHHPQ*TLAHLT
Trigger: AGTGAGGTGTGCAAGGGTGCACTGAGGGTGGTGGGA...CAGAGAAGTGCCATGTTTGCGTTGAGCCTTGCAGCTCTTCCAGCTGGGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp TGTGAGCACTCCAGTGAGTGCTCCTCCCTGGAGGTCAGCCACACACCTTGGTGGCCCAGCTGGAAGAGCTaGAAGGCTCAACGCAAACAT +
Preference number: 4 (lower is better)
Translates to: CEHSSECSSLEVSHTPWWPSWKS*KAQRKH
Trigger: ATGTTTGCGTTGAGCCTTGCAGCTCTTCCAGCTGGG...CCACCAAGGTGTGTGGCTGACCTCCAGGGAGGAGCACTCACTGGAGTGCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTTTCAGCCACACACCTTGGTaGTTTGCAAGGGATGGCTGT +
Preference number: 4 (lower is better)
Translates to: QVEQASSSVLRSPPGSSFSHTPW*FARDGC
Trigger: ACAGCCATCCCTTGCAAACCACCAAGGTGTGTGGCT...GAAAGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp GCAAGGCTCAACGCAAACATGGCACTTCTCTGCCACCTGTTCCCAGCAGCCTTCGTGAGTGCTCCTCCCTaGAGGTCAGCCACACACCTT +
Preference number: 4 (lower is better)
Translates to: ARLNANMALLCHLFPAAFVSAPP*RSATHL
Trigger: AAGGTGTGTGGCTGACCTCCAGGGAGGAGCACTCAC...GAAGGCTGCTGGGAACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp GAGCCAACCATGAGAACACAAAGGATCCCTCCCCATTCAGTCCCATCTCTGACTGTGGGGAGCTACCAGTaGCCGGGTCTGCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: EPTMRTQRIPPHSVPSLTVGSYQ*PGLLCA
Trigger: GGCACAGAGCAGACCCGGCCACTGGTAGCTCCCCAC...AGTCAGAGATGGGACTGAATGGGGAGGGATCCTTTGTGTTCTCATGGTTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp GAGCCAACCATGAGAACACAAAGGATCCCTCCCCATTCAGTCCCATCTCTGACTCCCGAGGGCAGTGCTTaGGCAGCAACAAGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: EPTMRTQRIPPHSVPSLTPEGSA*AATRGA
Trigger: CGCTCCCCTTGTTGCTGCCCAAGCACTGCCCTCGGG...AGTCAGAGATGGGACTGAATGGGGAGGGATCCTTTGTGTTCTCATGGTTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
3UTR CAA 72 bp GCTCCTCCCTGGAGGTCAGCCACACACCTTGGTGGTTaGCAAGGGATGGCTGTGCTGTCTCCCTGTCCTATA +
Preference number: 4 (lower is better)
Translates to: APPWRSATHLGG*QGMAVLSPCPI
Trigger: TATAGGACAGGGAGACAGCACAGCCATCCCTTGCAAACCACCAAGGTGTGTGGCTGACCTCCAGGGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp TGGAGGCTGAACGCCGGCCTGTCTGCAAGGTACACACAGCAGTGTGCACCTTGTAAGTCTCCAGCTCCTTaGGAAACCTCCACCATCCTG +
Preference number: 4 (lower is better)
Translates to: WRLNAGLSARYTQQCAPCKSPAP*ETSTIL
Trigger: CAGGATGGTGGAGGTTTCTCAAGGAGCTGGAGACTT...ACAAGGTGCACACTGCTGTGTGTACCTTGCAGACAGGCCGGCGTTCAGCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp CAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTTTCAGTCAGAGCCAACCATaGGAACACAAAGGATCCCTC +
Preference number: 4 (lower is better)
Translates to: QVEQASSSVLRSPPGSSFSQSQP*EHKGSL
Trigger: GAGGGATCCTTTGTGTTCTCATGGTTGGCTCTGACT...GAAAGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp TTTTTCCTGCAGAAGTACACGAGCCTAACCAAAGACAGGCTTTCCTGGTCCCAGCCTGCCGAGACCGTCTaGTGGGCTGTGCTGGCCGTT +
Preference number: 4 (lower is better)
Translates to: FFLQKYTSLTKDRLSWSQPAETV*WAVLAV
Trigger: AACGGCCAGCACAGCCCAGCAGACGGTCTCGGCAGG...CTGGGACCAGGAAAGCCTGTCTTTGGTTAGGCTCGTGTACTTCTGCAGGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp ACTGTCCATGAGGACCACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCACAAAGTCCTCATCTaGACGCAGGAAAAGCACAGG +
Preference number: 4 (lower is better)
Translates to: TVHEDHPSNHPQLALLGAHKVLI*TQEKHR
Trigger: CCTGTGCTTTTCCTGCGTGCAGATGAGGACTTTGTG...AGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTGGTCCTCATGGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp GCAAGGCTCAACGCAAACATGGCACTTCTCTGCCACCTGTTCCCAGCAGCCTTCTGGATCACCTGGAACTaGTCCATAGGCAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ARLNANMALLCHLFPAAFWITWN*SIGRGL
Trigger: CAAGCCCCTGCCTATGGAGCAGTTCCAGGTGATCCA...GAAGGCTGCTGGGAACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp ACTGTCCATGAGGACCACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTACTTCTTTCAGGTCATaGAACTCGGCACAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: TVHEDHPSNHPQLALLGATSFRS*NSAQAV
Trigger: CACTGCCTGTGCCGAGTTGCATGACCTGAAAGAAGT...AGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTGGTCCTCATGGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp CCAGTCCCCAGCTGGAAGAGCTGCAAGGCTCAACGCAAACATGGCACTTCTCTGTGGCTGAAGACCTCCTaGATGGTAAGGCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PVPSWKSCKAQRKHGTSLWLKTS*MVRQVW
Trigger: CCAGACCTGCCTTACCATGCAGGAGGTCTTCAGCCA...CAGAGAAGTGCCATGTTTGCGTTGAGCCTTGCAGCTCTTCCAGCTGGGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp TTTTTCCTGCAGAAGTACACGAGCCTAACCAAAGACAGGCTTTCCTGGTCCCAGACTCCTTGGGGCTCCTaGTGCAGCAGGTGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: FFLQKYTSLTKDRLSWSQTPWGS*CSRWGH
Trigger: GTGCCCCCACCTGCTGCAGCAGGAGCCCCAAGGAGT...CTGGGACCAGGAAAGCCTGTCTTTGGTTAGGCTCGTGTACTTCTGCAGGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp TTTTTCCTGCAGAAGTACACGAGCCTAACCAAAGACAGGCTTTCCTGGTCCCAGCACGAAGCCAGTGCCTaGGTCCTTGGAGAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: FFLQKYTSLTKDRLSWSQHEASA*VLGEGG
Trigger: GCCGCCCTCTCCAAGGACCCAGGCACTGGCTTCGTG...CTGGGACCAGGAAAGCCTGTCTTTGGTTAGGCTCGTGTACTTCTGCAGGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CTAACTCAGCAGGGTCTGGCCTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGATCGGCCTTCTCCAGGTaGAGGTACGCGTTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: LTQQGLAFSAPTGRQAQRSAFSR*RYALKR
Trigger: TCTCTTCAACGCGTACCTCCACCTGGAGAAGGCCGA...TCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAGGCCAGACCCTGCTGAGTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp GGCAGGCTCAAAGATGCTCAGCAAGGATGGCCTGGAACCCAGGTGATCCCCTCCAGTCTCTCCAGGAAGTaGGGGAATCATTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GRLKDAQQGWPGTQVIPSSLSRK*GNHFKA
Trigger: GGCCTTGAAATGATTCCCCCACTTCCTGGAGAGACT...GGAGGGGATCACCTGGGTTCCAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp AGTGAGTGCTCCTCCCTGGAGGTCAGCCACACACCTTGGTGGTTTGCAAGGGATGATGCTCAGCAAGGATaGCCTGGAACCCAGGTGATC +
Preference number: 4 (lower is better)
Translates to: SECSSLEVSHTPWWFARDDAQQG*PGTQVI
Trigger: GATCACCTGGGTTCCAGGCCATCCTTGCTGAGCATC...ATCCCTTGCAAACCACCAAGGTGTGTGGCTGACCTCCAGGGAGGAGCACTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp TCCACCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTGCTTGGGCAGCAACAAGACCTTCATTACTACCTaGAATTCACCCTTAGTGAAC +
Preference number: 4 (lower is better)
Translates to: STHLRLPDARGQCLGSNKTFITT*NSPLVN
Trigger: GTTCACTAAGGGTGAATTTCAGGTAGTAATGAAGGT...CTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp ACCCTCAGTGCACCCTTGCACACCTCACTGTCCATGAGGACCACCCCAGCAACCTTGGCCTTGCTGTTATaGAAGCTAGTGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TLSAPLHTSLSMRTTPATLALLL*KLVLWK
Trigger: CTTCCAGAGCACTAGCTTGCATAACAGCAAGGCCAA...GGTTGCTGGGGTGGTCCTCATGGACAGTGAGGTGTGCAAGGGTGCACTGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp GCAAGGCTCAACGCAAACATGGCACTTCTCTGCCACCTGTTCCCAGCAGCCTTCCCATCGGGTAGCAGCTaGACCACCTTCATTACTACC +
Preference number: 4 (lower is better)
Translates to: ARLNANMALLCHLFPAAFPSGSS*TTFITT
Trigger: GGTAGTAATGAAGGTGGTGCAGCTGCTACCCGATGG...GAAGGCTGCTGGGAACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGATGCTCAGCAAGGATGGCCTGTGCAAGCTAGTGCTCTaGAAGGAGTGGATGCTGACG +
Preference number: 4 (lower is better)
Translates to: LFCSHRKAGSKMLSKDGLCKLVL*KEWMLT
Trigger: CGTCAGCATCCACTCCTTCCAGAGCACTAGCTTGCA...CAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CTGTGTGGAAACAGTGGATCCCAGCAGCCTCTAACTCAGCAGGGTCTGGCCTTTTCCTTCTGGAGTTTCTaGAGGACCCGCCTGAACCCT +
Preference number: 4 (lower is better)
Translates to: LCGNSGSQQPLTQQGLAFSFWSF*RTRLNP
Trigger: AGGGTTCAGGCGGGTCCTCCAGAAACTCCAGAAGGA...AAAGGCCAGACCCTGCTGAGTTAGAGGCTGCTGGGATCCACTGTTTCCACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CCAGTCCCCAGCTGGAAGAGCTGCAAGGCTCAACGCAAACATGGCACTTCTCTGGTGTTCTCGCTCAGCTaGGCAAAGTCGTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: PVPSWKSCKAQRKHGTSLVFSLS*AKSWIS
Trigger: AGAGATCCACGACTTTGCCCAGCTGAGCGAGAACAC...CAGAGAAGTGCCATGTTTGCGTTGAGCCTTGCAGCTCTTCCAGCTGGGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGATGCTCAGCAAGGATGGCCTGAAGCTCTGGATCACCTaGAACTGCTCCATAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LFCSHRKAGSKMLSKDGLKLWIT*NCSIGR
Trigger: CCTGCCTATGGAGCAGTTCCAGGTGATCCAGAGCTT...CAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp GAGCCAACCATGAGAACACAAAGGATCCCTCCCCATTCAGTCCCATCTCTGACTACCTCGGGGAAGCCTTaGATGTGCCAGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EPTMRTQRIPPHSVPSLTTSGKP*MCQKAR
Trigger: CCTGGCCTTCTGGCACATCCAAGGCTTCCCCGAGGT...AGTCAGAGATGGGACTGAATGGGGAGGGATCCTTTGTGTTCTCATGGTTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp TCCTCTGTGCCTCCTGCCCAGGTTCCCAGACAAGTGGAGCAGGCCTCTTCCTCTGAGAGTCCAGAAAACTaGGTGAAGCTGCCTTTCACA +
Preference number: 4 (lower is better)
Translates to: SSVPPAQVPRQVEQASSSESPEN*VKLPFT
Trigger: TGTGAAAGGCAGCTTCACCCAGTTTTCTGGACTCTC...AGAGGAAGAGGCCTGCTCCACTTGTCTGGGAACCTGGGCAGGAGGCACAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CTGTGTGGAAACAGTGGATCCCAGCAGCCTCTAACTCAGCAGGGTCTGGCCTTTAGGTTCCCAGACAAGTaGAGCAGGCCTCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LCGNSGSQQPLTQQGLAFRFPDK*SRPLPL
Trigger: CAGAGGAAGAGGCCTGCTCCACTTGTCTGGGAACCT...AAAGGCCAGACCCTGCTGAGTTAGAGGCTGCTGGGATCCACTGTTTCCACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CTAACTCAGCAGGGTCTGGCCTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGAGGCTCAACGCAAACATaGCACTTCTCTGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: LTQQGLAFSAPTGRQAQRGSTQT*HFSATC
Trigger: ACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCC...TCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAGGCCAGACCCTGCTGAGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp TTTTTCCTGCAGAAGTACACGAGCCTAACCAAAGACAGGCTTTCCTGGTCCCAGGGAAGGAGTGGATGCTaGCGGAGTGCCGACTGTCCA +
Preference number: 4 (lower is better)
Translates to: FFLQKYTSLTKDRLSWSQGRSGC*RSADCP
Trigger: TGGACAGTCGGCACTCCGTCAGCATCCACTCCTTCC...CTGGGACCAGGAAAGCCTGTCTTTGGTTAGGCTCGTGTACTTCTGCAGGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp TTCCAATACTGGATAAATGGGAACAACTTCGGCCTCCTCCCCTTTTCAAATATCTCCAGGGGACTCCCTTaGTCGGGCAGGGGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: FQYWINGNNFGLLPFSNISRGLP*SGRGRR
Trigger: CCGCCTGCCCCTGCCCGAGCAAGGGAGTCCCCTGGA...GATATTTGAAAAGGGGAGGAGGCCGAAGTTGTTCCCATTTATCCAGTATTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR GCA 90 bp TTTTTCCTGCAGAAGTACACGAGCCTAACCAAAGACAGGCTTTCCTGGTCCCAGAGGCCTCTTCCTCTGTaGTGCGTTCGCCCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: FFLQKYTSLTKDRLSWSQRPLPL*CVRPLE
Trigger: TTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCT...CTGGGACCAGGAAAGCCTGTCTTTGGTTAGGCTCGTGTACTTCTGCAGGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp ACCCTCAGTGCACCCTTGCACACCTCACTGTCCATGAGGACCACCCCAGCAACCAGGTCCTCGGTGTTATaGTACACATGGTATGTGTTC +
Preference number: 4 (lower is better)
Translates to: TLSAPLHTSLSMRTTPATRSSVL*YTWYVF
Trigger: GAACACATACCATGTGTACCATAACACCGAGGACCT...GGTTGCTGGGGTGGTCCTCATGGACAGTGAGGTGTGCAAGGGTGCACTGAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp TTCCAATACTGGATAAATGGGAACAACTTCGGCCTCCTCCCCTTTTCAAATATCGCTGGGGGAGGCCCGTaGGCATCACGGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FQYWINGNNFGLLPFSNIAGGGP*ASRSCS
Trigger: GCTGCAGCTCCGTGATGCCCACGGGCCTCCCCCAGC...GATATTTGAAAAGGGGAGGAGGCCGAAGTTGTTCCCATTTATCCAGTATTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp GCAAGGCTCAACGCAAACATGGCACTTCTCTGCCACCTGTTCCCAGCAGCCTTCTCACTGTTCAGCTCCTaGGTTTCAGCAAGCACCAGT +
Preference number: 4 (lower is better)
Translates to: ARLNANMALLCHLFPAAFSLFSS*VSASTS
Trigger: ACTGGTGCTTGCTGAAACCCAGGAGCTGAACAGTGA...GAAGGCTGCTGGGAACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp TTCCAATACTGGATAAATGGGAACAACTTCGGCCTCCTCCCCTTTTCAAATATCCGCCCATCTGGCAGCTaGAGACGAGGGCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: FQYWINGNNFGLLPFSNIRPSGS*RRGLGE
Trigger: CTCCCCCAGCCCTCGTCTTCAGCTGCCAGATGGGCG...GATATTTGAAAAGGGGAGGAGGCCGAAGTTGTTCCCATTTATCCAGTATTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp GAGCCAACCATGAGAACACAAAGGATCCCTCCCCATTCAGTCCCATCTCTGACTACTGAGGCAGAGAGGTaGTGTGATCAGCCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: EPTMRTQRIPPHSVPSLTTEAER*CDQPVV
Trigger: GACCACTGGCTGATCACATCACCTCTCTGCCTCAGT...AGTCAGAGATGGGACTGAATGGGGAGGGATCCTTTGTGTTCTCATGGTTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp CTAACTCAGCAGGGTCTGGCCTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGAGTGTTATGGTACACATaGTATGTGTTCTCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LTQQGLAFSAPTGRQAQRVLWYT*YVFSLS
Trigger: GCTGAGCGAGAACACATACCATGTGTACCATAACAC...TCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAGGCCAGACCCTGCTGAGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp TGTGAGCACTCCAGTGAGTGCTCCTCCCTGGAGGTCAGCCACACACCTTGGTGGCCTTCTAACTTCTTCTaGTTTTCCAAGACCACTTCT +
Preference number: 4 (lower is better)
Translates to: CEHSSECSSLEVSHTPWWPSNFF*FSKTTS
Trigger: AGAAGTGGTCTTGGAAAACCAGAAGAAGTTAGAAGG...CCACCAAGGTGTGTGGCTGACCTCCAGGGAGGAGCACTCACTGGAGTGCTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp TTTTTCCTGCAGAAGTACACGAGCCTAACCAAAGACAGGCTTTCCTGGTCCCAGCCCTGGAGGTTCTCATaGAGGTTCTGCTTGTCTCGA +
Preference number: 4 (lower is better)
Translates to: FFLQKYTSLTKDRLSWSQPWRFS*RFCLSR
Trigger: TCGAGACAAGCAGAACCTTCATGAGAACCTCCAGGG...CTGGGACCAGGAAAGCCTGTCTTTGGTTAGGCTCGTGTACTTCTGCAGGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp TTCCAATACTGGATAAATGGGAACAACTTCGGCCTCCTCCCCTTTTCAAATATCACAAAGGCGTCCAACTaGGCCTCCAGGGGACTCCCT +
Preference number: 4 (lower is better)
Translates to: FQYWINGNNFGLLPFSNITKASN*ASRGLP
Trigger: AGGGAGTCCCCTGGAGGCCCAGTTGGACGCCTTTGT...GATATTTGAAAAGGGGAGGAGGCCGAAGTTGTTCCCATTTATCCAGTATTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp TTCCAATACTGGATAAATGGGAACAACTTCGGCCTCCTCCCCTTTTCAAATATCTCTCCCGGAGAACACTaGCAAAGGCGTCCAACTGGG +
Preference number: 4 (lower is better)
Translates to: FQYWINGNNFGLLPFSNISPGEH*QRRPTG
Trigger: CCCAGTTGGACGCCTTTGTCAGTGTTCTCCGGGAGA...GATATTTGAAAAGGGGAGGAGGCCGAAGTTGTTCCCATTTATCCAGTATTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp TTTTTCCTGCAGAAGTACACGAGCCTAACCAAAGACAGGCTTTCCTGGTCCCAGTTGAGCAGCTCATCATaGATCTGGAACTCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FFLQKYTSLTKDRLSWSQLSSSS*IWNSSL
Trigger: CAAGGAGGAGTTCCAGATCCATGATGAGCTGCTCAA...CTGGGACCAGGAAAGCCTGTCTTTGGTTAGGCTCGTGTACTTCTGCAGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp TTTTTCCTGCAGAAGTACACGAGCCTAACCAAAGACAGGCTTTCCTGGTCCCAGGTCCAGAAAACTGGGTaGAGCTGCCTTTCACATAAT +
Preference number: 4 (lower is better)
Translates to: FFLQKYTSLTKDRLSWSQVQKTG*SCLSHN
Trigger: ATTATGTGAAAGGCAGCTTCACCCAGTTTTCTGGAC...CTGGGACCAGGAAAGCCTGTCTTTGGTTAGGCTCGTGTACTTCTGCAGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp TTCCAATACTGGATAAATGGGAACAACTTCGGCCTCCTCCCCTTTTCAAATATCAGCTGGGCAAAGTCGTaGATCTCTTTCCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: FQYWINGNNFGLLPFSNISWAKS*ISFRMA
Trigger: GGCCATCCGGAAAGAGATCCACGACTTTGCCCAGCT...GATATTTGAAAAGGGGAGGAGGCCGAAGTTGTTCCCATTTATCCAGTATTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp TTCCAATACTGGATAAATGGGAACAACTTCGGCCTCCTCCCCTTTTCAAATATCGTCAGCCACACACCTTaGTGGTTTGCAAGGGATGGC +
Preference number: 4 (lower is better)
Translates to: FQYWINGNNFGLLPFSNIVSHTP*WFARDG
Trigger: GCCATCCCTTGCAAACCACCAAGGTGTGTGGCTGAC...GATATTTGAAAAGGGGAGGAGGCCGAAGTTGTTCCCATTTATCCAGTATTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CCA 90 bp TTCCAATACTGGATAAATGGGAACAACTTCGGCCTCCTCCCCTTTTCAAATATCACAGTGTTTGGCAACTaGGGGAGTGAGCCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: FQYWINGNNFGLLPFSNITVFGN*GSEPLG
Trigger: TCCAAGGGGCTCACTCCCCCAGTTGCCAAACACTGT...GATATTTGAAAAGGGGAGGAGGCCGAAGTTGTTCCCATTTATCCAGTATTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR TCA 90 bp TTCCAATACTGGATAAATGGGAACAACTTCGGCCTCCTCCCCTTTTCAAATATCACGTGTAATGAGCCTTaGGCAGCTCATCATGGATCT +
Preference number: 4 (lower is better)
Translates to: FQYWINGNNFGLLPFSNITCNEP*AAHHGS
Trigger: AGATCCATGATGAGCTGCTCAAGGCTCATTACACGT...GATATTTGAAAAGGGGAGGAGGCCGAAGTTGTTCCCATTTATCCAGTATTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 90 bp CGGGCGCCGAGTCAGGCAGCGACGGGGCGCGCCCGGCGCGCGCTCTaGCTCCAGCTCGCTCCTCCCAACTTCGCCAGCCCATGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: RAPSQAATGRARRAL*LQLAPPNFASPCGG
Trigger: GCCCCCGCATGGGCTGGCGAAGTTGGGAGGAGCGAGCTGGAGCCAGAGCGCGCGCCGGGCGCGCCCCGTCGCTGCCTGACTCGGCGCCCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 90 bp CCAGCTCGCTCCTCCCAACTTCGCCAGCCCATGCGGGGGCAGAGGTaGCTCCGGAGGTGGGCAGGCCAGGCGGACCCGGCGAGGCCACGC +
Preference number: 5 (lower is better)
Translates to: PARSSQLRQPMRGQR*LRRWAGQADPARPR
Trigger: GCGTGGCCTCGCCGGGTCCGCCTGGCCTGCCCACCTCCGGAGCCACCTCTGCCCCCGCATGGGCTGGCGAAGTTGGGAGGAGCGAGCTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 90 bp GGATGCTCCCCAGGGCCTTGGCGCTGGGCTGGGCCGTGCCGTAGATaGGCATGCGGGGCACCCGCCGGAAGTTGGCCACATCCATCTCTC +
Preference number: 5 (lower is better)
Translates to: GCSPGPWRWAGPCRR*ACGAPAGSWPHPSL
Trigger: GAGAGATGGATGTGGCCAACTTCCGGCGGGTGCCCCGCATGCCCATCTACGGCACGGCCCAGCCCAGCGCCAAGGCCCTGGGGAGCATCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 90 bp AGGGCTCGAGGCTGCAGCTCTGCTCCTGCCACCGGTAGCGCAGCCTaGAGAAGGGCTGGTCCTCCCCGCTCTCCAGCTCGGGGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: RARGCSSAPATGSAA*RRAGPPRSPARGSP
Trigger: TGGGCTTCCCCGAGCTGGAGAGCGGGGAGGACCAGCCCTTCTCCAGGCTGCGCTACCGGTGGCAGGAGCAGAGCTGCAGCCTCGAGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp GGACCACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCCCAGTGCCTGGGTCCTaGGAGAGGGCGGCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: GPPQQPPSASTPWGSCCSPVPGS*ERAARR
Trigger: CCTGCGGGCCGCCCTCTCCAAGGACCCAGGCACTGG...GCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTGGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS GCA 90 bp GTAAGGCCCCCTACAGCAAGTCCTCGGGGGCAGAGGGCTCGAGGCTaGAGCTCTGCTCCTGCCACCGGTAGCGCAGCCTGGAGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: VRPPTASPRGQRARG*SSAPATGSAAWRRA
Trigger: AGCCCTTCTCCAGGCTGCGCTACCGGTGGCAGGAGCAGAGCTGCAGCCTCGAGCCCTCTGCCCCCGAGGACTTGCTGTAGGGGGCCTTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp TCCACCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTGCTTGGGCAGCAACAAGCCACCACCATCGCAGTaGTGGTACGGCCCTGGCCGC +
Preference number: 5 (lower is better)
Translates to: STHLRLPDARGQCLGSNKPPPSQ*WYGPGR
Trigger: GCGGCCAGGGCCGTACCACAACTGCGATGGTGGTGG...CTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS GCA 90 bp GCCGACTGTCCATCGTGCCACTGCCCTGTAGGCCCTCAAATGGGGTaGCTGCCGAGACCGTCTGCTGGGCTGTGCTGGCCGTTGTACCCA +
Preference number: 5 (lower is better)
Translates to: ADCPSCHCPVGPQMG*LPRPSAGLCWPLYP
Trigger: TGGGTACAACGGCCAGCACAGCCCAGCAGACGGTCTCGGCAGGCACCCCATTTGAGGGCCTACAGGGCAGTGGCACGATGGACAGTCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS GCA 90 bp CCACTGCCCTGTAGGCCCTCAAATGGGGTGCCTGCCGAGACCGTCTaGTGGGCTGTGCTGGCCGTTGTACCCATAGTCTGCCAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: PLPCRPSNGVPAETV*WAVLAVVPIVCQQP
Trigger: AGGCTGCTGGCAGACTATGGGTACAACGGCCAGCACAGCCCAGCAGACGGTCTCGGCAGGCACCCCATTTGAGGGCCTACAGGGCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS GCA 90 bp GTGGGCTGCAGGAAGAGGGGCCGCTTGTACACCTCCTCCGTCACATaGAAGTCGTCCTCACCATGGATGGCCACAGCATGGGGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: VGCRKRGRLYTSSVT*KSSSPWMATAWGSP
Trigger: GGGGGAGCCCCATGCTGTGGCCATCCATGGTGAGGACGACTTGCATGTGACGGAGGAGGTGTACAAGCGGCCCCTCTTCCTGCAGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 90 bp CTGCCCTGTAGGCCCTCAAATGGGGTGCCTGCCGAGACCGTCTGCTaGGCTGTGCTGGCCGTTGTACCCATAGTCTGCCAGCAGCCTCAG +
Preference number: 5 (lower is better)
Translates to: LPCRPSNGVPAETVC*AVLAVVPIVCQQPQ
Trigger: CTGAGGCTGCTGGCAGACTATGGGTACAACGGCCAGCACAGCCCAGCAGACGGTCTCGGCAGGCACCCCATTTGAGGGCCTACAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 90 bp CAGAAGGCCAGGACAGCCACCACCATCGCAGTTGTGGTACGGCCCTaGCCGCTGAGGCAGCTGAACACGAAGCCAGTGCCTGGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: QKARTATTIAVVVRP*PLRQLNTKPVPGSL
Trigger: CAAGGACCCAGGCACTGGCTTCGTGTTCAGCTGCCTCAGCGGCCAGGGCCGTACCACAACTGCGATGGTGGTGGCTGTCCTGGCCTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp GCAAGGCTCAACGCAAACATGGCACTTCTCTGCCACCTGTTCCCAGCAGCCTTCATGCTCCCCAGGGCCTaGGCGCTGGGCTGGGCCGTG +
Preference number: 5 (lower is better)
Translates to: ARLNANMALLCHLFPAAFMLPRA*ALGWAV
Trigger: CACGGCCCAGCCCAGCGCCAAGGCCCTGGGGAGCAT...GAAGGCTGCTGGGAACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp CACCCCAGCAACCACCCTCAGCTAGCACTCCTTGGGGCTCCTGCTGCAGCAGGTCACCTCGGGGAAGCCTaGGATGTGCCAGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: HPSNHPQLALLGAPAAAGHLGEA*DVPEGQ
Trigger: CTGGCCTTCTGGCACATCCAAGGCTTCCCCGAGGTG...ACCTGCTGCAGCAGGAGCCCCAAGGAGTGCTAGCTGAGGGTGGTTGCTGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp TGGAGGCTGAACGCCGGCCTGTCTGCAAGGTACACACAGCAGTGTGCACCTTGTGGGGGAGTGAGCCCCTaGGAGGCTGAACGCCGGCCT +
Preference number: 5 (lower is better)
Translates to: WRLNAGLSARYTQQCAPCGGVSP*EAERRP
Trigger: AGGCCGGCGTTCAGCCTCCAAGGGGCTCACTCCCCC...ACAAGGTGCACACTGCTGTGTGTACCTTGCAGACAGGCCGGCGTTCAGCCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp CAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTTTCGCCCGAGGGCAGTGCTaGGGCAGCAACAAGGGGAGC +
Preference number: 5 (lower is better)
Translates to: QVEQASSSVLRSPPGSSFARGQC*GSNKGS
Trigger: GCTCCCCTTGTTGCTGCCCAAGCACTGCCCTCGGGC...GAAAGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp CTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGATGCTCAGCAAGGATGGCCTGGTCAGGGGGCCCTCCTaGCCTGGGGGAGGCTCGCTT +
Preference number: 5 (lower is better)
Translates to: LFCSHRKAGSKMLSKDGLVRGPS*PGGGSL
Trigger: AAGCGAGCCTCCCCCAGGCAAGGAGGGCCCCCTGAC...CAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS TCA 90 bp GGGCCCCACAGCTTCCCACGGTGCCCAGCACATCCATCTTCTCAGTaGCATCCCGCACCAGGAAGTAGCGGCCTTGCACCAGGTAGTGCT +
Preference number: 5 (lower is better)
Translates to: GPHSFPRCPAHPSSQ*HPAPGSSGLAPGSA
Trigger: AGCACTACCTGGTGCAAGGCCGCTACTTCCTGGTGCGGGATGTCACTGAGAAGATGGATGTGCTGGGCACCGTGGGAAGCTGTGGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp AGACAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTGGCACCCGCCGGAAGTaGGCCACATCCATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: RQVEQASSSVLRSPPGSSGTRRK*ATSISL
Trigger: CAGAGAGATGGATGTGGCCAACTTCCGGCGGGTGCC...AGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 90 bp TCTTCCACCATCCTCCTTCCCTGGGGCACCATGCGGAGAAAGCTCTaGATCACCTGGAACTGCTCCATAGGCAGGGGCTTGGCCTGCGTG +
Preference number: 5 (lower is better)
Translates to: SSTILLPWGTMRRKL*ITWNCSIGRGLACV
Trigger: CACGCAGGCCAAGCCCCTGCCTATGGAGCAGTTCCAGGTGATCCAGAGCTTTCTCCGCATGGTGCCCCAGGGAAGGAGGATGGTGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp CAAGTGGAGCAGGCCTCTTCCTCTGTGCTGCGTTCGCCCCCTGGAAGCTCTTTCCAGGAAGTAGCGGCCTaGCACCAGGTAGTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: QVEQASSSVLRSPPGSSFQEVAA*HQVVLR
Trigger: CCTGAGCACTACCTGGTGCAAGGCCGCTACTTCCTG...GAAAGAGCTTCCAGGGGGCGAACGCAGCACAGAGGAAGAGGCCTGCTCCACTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp TCCACCCACCTCAGGCTGCCAGACGCCCGAGGGCAGTGCTTGGGCAGCAACAAGAGGTGGAGGTACGCGTaGAAGAGAATCAGGCAGACA +
Preference number: 5 (lower is better)
Translates to: STHLRLPDARGQCLGSNKRWRYA*KRIRQT
Trigger: TGTCTGCCTGATTCTCTTCAACGCGTACCTCCACCT...CTTGTTGCTGCCCAAGCACTGCCCTCGGGCGTCTGGCAGCCTGAGGTGGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS TCA 90 bp AGGGCCTCTGCCAGGAGTCGGCCTTCTCCAGGTGGAGGTACGCGTTaGAGAGAATCAGGCAGACATAGCGCTCCAAGTACTGCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: RASARSRPSPGGGTR*RESGRHSAPSTAGS
Trigger: GGAGCCTGCAGTACTTGGAGCGCTATGTCTGCCTGATTCTCTTCAACGCGTACCTCCACCTGGAGAAGGCCGACTCCTGGCAGAGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 90 bp ACACAGAAGATGACACACTCCCTATGTCCGTCCTTCTGGAGTTTCTaGAGGACCCGCCTGAACCCTGAGAGGCTGGGCTGTCCCATGCCG +
Preference number: 5 (lower is better)
Translates to: TQKMTHSLCPSFWSF*RTRLNPERLGCPMP
Trigger: CGGCATGGGACAGCCCAGCCTCTCAGGGTTCAGGCGGGTCCTCCAGAAACTCCAGAAGGACGGACATAGGGAGTGTGTCATCTTCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp GGCAGGCTCAAAGATGCTCAGCAAGGATGGCCTGGAACCCAGGTGATCCCCTCCACAACAGGGGCCACCTaGTTGGGGATGATGGACTTG +
Preference number: 5 (lower is better)
Translates to: GRLKDAQQGWPGTQVIPSTTGAT*LGMMDL
Trigger: CAAGTCCATCATCCCCAACAAGGTGGCCCCTGTTGT...GGAGGGGATCACCTGGGTTCCAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp TGGAGGCTGAACGCCGGCCTGTCTGCAAGGTACACACAGCAGTGTGCACCTTGTGGTCAGCCACACACCTaGGTGGTTTGCAAGGGATGG +
Preference number: 5 (lower is better)
Translates to: WRLNAGLSARYTQQCAPCGQPHT*VVCKGW
Trigger: CCATCCCTTGCAAACCACCAAGGTGTGTGGCTGACC...ACAAGGTGCACACTGCTGTGTGTACCTTGCAGACAGGCCGGCGTTCAGCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS GCA 90 bp CTGTTATGCAAGCTAGTGCTCTGGAAGGAGTGGATGCTGACGGAGTaGCGACTGTCCATCGTGCCACTGCCCTGTAGGCCCTCAAATGGG +
Preference number: 5 (lower is better)
Translates to: LLCKLVLWKEWMLTE*RLSIVPLPCRPSNG
Trigger: CCCATTTGAGGGCCTACAGGGCAGTGGCACGATGGACAGTCGGCACTCCGTCAGCATCCACTCCTTCCAGAGCACTAGCTTGCATAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp TTTTTCCTGCAGAAGTACACGAGCCTAACCAAAGACAGGCTTTCCTGGTCCCAGTGCACCTGCCGGAAGTaGGGGGCCCCACAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: FFLQKYTSLTKDRLSWSQCTCRK*GAPQLP
Trigger: GGGAAGCTGTGGGGCCCCCAACTTCCGGCAGGTGCA...CTGGGACCAGGAAAGCCTGTCTTTGGTTAGGCTCGTGTACTTCTGCAGGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp TCCTCTGTGCCTCCTGCCCAGGTTCCCAGACAAGTGGAGCAGGCCTCTTCCTCTTCACCCTTAGTGAACTaGGCATCAGGCACACTCACG +
Preference number: 5 (lower is better)
Translates to: SSVPPAQVPRQVEQASSSSPLVN*ASGTLT
Trigger: CGTGAGTGTGCCTGATGCCAAGTTCACTAAGGGTGA...AGAGGAAGAGGCCTGCTCCACTTGTCTGGGAACCTGGGCAGGAGGCACAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS TCA 90 bp GCTCAGGGGTGTTGTCCGAGAGCCGGCCCAACGTGTAATGAGCCTTaGGCAGCTCATCATGGATCTGGAACTCCTCCTTGCAGTTGTACG +
Preference number: 5 (lower is better)
Translates to: AQGCCPRAGPTCNEP*AAHHGSGTPPCSCT
Trigger: CGTACAACTGCAAGGAGGAGTTCCAGATCCATGATGAGCTGCTCAAGGCTCATTACACGTTGGGCCGGCTCTCGGACAACACCCCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS GCA 90 bp ACAGGGGCCACCTTGTTGGGGATGATGGACTTGGCCTTGCTGTTATaGAAGCTAGTGCTCTGGAAGGAGTGGATGCTGACGGAGTGCCGA +
Preference number: 5 (lower is better)
Translates to: TGATLLGMMDLALLL*KLVLWKEWMLTECR
Trigger: TCGGCACTCCGTCAGCATCCACTCCTTCCAGAGCACTAGCTTGCATAACAGCAAGGCCAAGTCCATCATCCCCAACAAGGTGGCCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp AGTGAGTGCTCCTCCCTGGAGGTCAGCCACACACCTTGGTGGTTTGCAAGGGATACACACCTTGGTGGTTaGCAAGGGATGGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: SECSSLEVSHTPWWFARDTHLGG*QGMAVL
Trigger: CAGCACAGCCATCCCTTGCAAACCACCAAGGTGTGT...ATCCCTTGCAAACCACCAAGGTGTGTGGCTGACCTCCAGGGAGGAGCACTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp GCAAGGCTCAACGCAAACATGGCACTTCTCTGCCACCTGTTCCCAGCAGCCTTCAGAGATCCACAGTGTTaGGCAACTGGGGGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: ARLNANMALLCHLFPAAFRDPQC*ATGGVS
Trigger: GCTCACTCCCCCAGTTGCCAAACACTGTGGATCTCT...GAAGGCTGCTGGGAACAGGTGGCAGAGAAGTGCCATGTTTGCGTTGAGCCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp CTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGATGCTCAGCAAGGATGGCCTGACCAGGCTGGGTAGGTaGTCATTCCTGAAGTCTCCC +
Preference number: 5 (lower is better)
Translates to: LFCSHRKAGSKMLSKDGLTRLGR*SFLKSP
Trigger: GGGAGACTTCAGGAATGACAACCTACCCAGCCTGGT...CAGGCCATCCTTGCTGAGCATCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 90 bp TTGGGGATGATGGACTTGGCCTTGCTGTTATGCAAGCTAGTGCTCTaGAAGGAGTGGATGCTGACGGAGTGCCGACTGTCCATCGTGCCA +
Preference number: 5 (lower is better)
Translates to: LGMMDLALLLCKLVL*KEWMLTECRLSIVP
Trigger: TGGCACGATGGACAGTCGGCACTCCGTCAGCATCCACTCCTTCCAGAGCACTAGCTTGCATAACAGCAAGGCCAAGTCCATCATCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp TTTTTCCTGCAGAAGTACACGAGCCTAACCAAAGACAGGCTTTCCTGGTCCCAGAGGAAGAGGGGCCGCTaGTACACCTCCTCCGTCACA +
Preference number: 5 (lower is better)
Translates to: FFLQKYTSLTKDRLSWSQRKRGR*YTSSVT
Trigger: TGTGACGGAGGAGGTGTACAAGCGGCCCCTCTTCCT...CTGGGACCAGGAAAGCCTGTCTTTGGTTAGGCTCGTGTACTTCTGCAGGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 90 bp CTTCCCTGGGCTGGGCTCTCCGGTCGGATACCTTCTAACTTCTTCTaGTTTTCCAAGACCACTTCTTTCAGGTCATGCAACTCGGCACAG +
Preference number: 5 (lower is better)
Translates to: LPWAGLSGRIPSNFF*FSKTTSFRSCNSAQ
Trigger: CTGTGCCGAGTTGCATGACCTGAAAGAAGTGGTCTTGGAAAACCAGAAGAAGTTAGAAGGTATCCGACCGGAGAGCCCAGCCCAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp CTAACTCAGCAGGGTCTGGCCTTTTCTGCTCCCACCGGAAGGCAGGCTCAAAGAATCTGGAACTCCTCCTaGCAGTTGTACGTGATCACA +
Preference number: 5 (lower is better)
Translates to: LTQQGLAFSAPTGRQAQRIWNSS*QLYVIT
Trigger: TGTGATCACGTACAACTGCAAGGAGGAGTTCCAGAT...TCTTTGAGCCTGCCTTCCGGTGGGAGCAGAAAAGGCCAGACCCTGCTGAGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp TTTTTCCTGCAGAAGTACACGAGCCTAACCAAAGACAGGCTTTCCTGGTCCCAGACCCTCAGTGCACCCTaGCACACCTCACTGTCCATG +
Preference number: 5 (lower is better)
Translates to: FFLQKYTSLTKDRLSWSQTLSAP*HTSLSM
Trigger: CATGGACAGTGAGGTGTGCAAGGGTGCACTGAGGGT...CTGGGACCAGGAAAGCCTGTCTTTGGTTAGGCTCGTGTACTTCTGCAGGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS GCA 90 bp AAGGTTCTGCTTGTCTCGAGGTGTGTAGGACACAAAGTCCTCATCTaGACGCAGGAAAAGCACAGGTTCCTCCCGCACACAGAAGATGAC +
Preference number: 5 (lower is better)
Translates to: KVLLVSRCVGHKVLI*TQEKHRFLPHTEDD
Trigger: GTCATCTTCTGTGTGCGGGAGGAACCTGTGCTTTTCCTGCGTGCAGATGAGGACTTTGTGTCCTACACACCTCGAGACAAGCAGAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp GAGCCAACCATGAGAACACAAAGGATCCCTCCCCATTCAGTCCCATCTCTGACTATGATGGACTTGGCCTaGCTGTTATGCAAGCTAGTG +
Preference number: 5 (lower is better)
Translates to: EPTMRTQRIPPHSVPSLTMMDLA*LLCKLV
Trigger: CACTAGCTTGCATAACAGCAAGGCCAAGTCCATCAT...AGTCAGAGATGGGACTGAATGGGGAGGGATCCTTTGTGTTCTCATGGTTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp TTTTTCCTGCAGAAGTACACGAGCCTAACCAAAGACAGGCTTTCCTGGTCCCAGTTGGGGATGATGGACTaGGCCTTGCTGTTATGCAAG +
Preference number: 5 (lower is better)
Translates to: FFLQKYTSLTKDRLSWSQLGMMD*ALLLCK
Trigger: CTTGCATAACAGCAAGGCCAAGTCCATCATCCCCAA...CTGGGACCAGGAAAGCCTGTCTTTGGTTAGGCTCGTGTACTTCTGCAGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS-3UTR CAA 90 bp TTCCAATACTGGATAAATGGGAACAACTTCGGCCTCCTCCCCTTTTCAAATATCCAGCCTCCGCATTTCTaGCGCCTCTTTCGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: FQYWINGNNFGLLPFSNIQPPHF*RLFRCL
Trigger: AAGGCAGCGAAAGAGGCGCAAGAAATGCGGAGGCTG...GATATTTGAAAAGGGGAGGAGGCCGAAGTTGTTCCCATTTATCCAGTATTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS GCA 72 bp ATCCGTGCTCCTGCGGCCGGCGTGCTGCGCCCGAACTaGGGGCGCCGAGTCAGGCAGCGACGGGGCGCGCCC +
Preference number: 6 (lower is better)
Translates to: IRAPAAGVLRPN*GRRVRQRRGAP
Trigger: GGGCGCGCCCCGTCGCTGCCTGACTCGGCGCCCGCAGTTCGGGCGCAGCACGCCGGCCGCAGGAGCACGGAT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 72 bp CCTGCCCACGCCCATCTGGCAGCTGAAGACGAGGGCTaGGGGAGGCCCGTGGGCATCACGGAGCTGCAGCAG +
Preference number: 6 (lower is better)
Translates to: PAHAHLAAEDEG*GRPVGITELQQ
Trigger: CTGCTGCAGCTCCGTGATGCCCACGGGCCTCCCCCAGCCCTCGTCTTCAGCTGCCAGATGGGCGTGGGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 72 bp CTGGCCGCTGAGGCAGCTGAACACGAAGCCAGTGCCTaGGTCCTTGGAGAGGGCGGCCCGCAGGGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: LAAEAAEHEASA*VLGEGGPQGLQ
Trigger: CTGGAGGCCCTGCGGGCCGCCCTCTCCAAGGACCCAGGCACTGGCTTCGTGTTCAGCTGCCTCAGCGGCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS GCA 72 bp CCTACAGCAAGTCCTCGGGGGCAGAGGGCTCGAGGCTaGAGCTCTGCTCCTGCCACCGGTAGCGCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: PTASPRGQRARG*SSAPATGSAAW
Trigger: CCAGGCTGCGCTACCGGTGGCAGGAGCAGAGCTGCAGCCTCGAGCCCTCTGCCCCCGAGGACTTGCTGTAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS TCA 72 bp ACCCTGAGAGGCTGGGCTGTCCCATGCCGAACACAGTaGGCCCACCCTGCACCTGCCGGAAGTTGGGGGCCC +
Preference number: 6 (lower is better)
Translates to: TLRGWAVPCRTQ*AHPAPAGSWGP
Trigger: GGGCCCCCAACTTCCGGCAGGTGCAGGGTGGGCTCACTGTGTTCGGCATGGGACAGCCCAGCCTCTCAGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS GCA 72 bp CCATCGTGCCACTGCCCTGTAGGCCCTCAAATGGGGTaGCTGCCGAGACCGTCTGCTGGGCTGTGCTGGCCG +
Preference number: 6 (lower is better)
Translates to: PSCHCPVGPQMG*LPRPSAGLCWP
Trigger: CGGCCAGCACAGCCCAGCAGACGGTCTCGGCAGGCACCCCATTTGAGGGCCTACAGGGCAGTGGCACGATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS GCA 72 bp CTGGGCTGTCCCATGCCGAACACAGTGAGCCCACCCTaGACCTGCCGGAAGTTGGGGGCCCCACAGCTTCCC +
Preference number: 6 (lower is better)
Translates to: LGCPMPNTVSPP*TCRKLGAPQLP
Trigger: GGGAAGCTGTGGGGCCCCCAACTTCCGGCAGGTGCAGGGTGGGCTCACTGTGTTCGGCATGGGACAGCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS GCA 72 bp TGTCCCATGCCGAACACAGTGAGCCCACCCTGCACCTaGCGGAAGTTGGGGGCCCCACAGCTTCCCACGGTG +
Preference number: 6 (lower is better)
Translates to: CPMPNTVSPPCT*RKLGAPQLPTV
Trigger: CACCGTGGGAAGCTGTGGGGCCCCCAACTTCCGGCAGGTGCAGGGTGGGCTCACTGTGTTCGGCATGGGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 72 bp GAGCTCAGCGTCACGGGCAGGCGGTACAGCTCAGGGTaGGCACACAGCCAGCGGCTGAAACTGAGGGCAAAG +
Preference number: 6 (lower is better)
Translates to: ELSVTGRRYSSG*AHSQRLKLRAK
Trigger: CTTTGCCCTCAGTTTCAGCCGCTGGCTGTGTGCCCACCCTGAGCTGTACCGCCTGCCCGTGACGCTGAGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 72 bp GAAGGCTCACCCAGACAACCTTCCGCAGCCTCCTCTTaGCGTCCGTCAGGTAGGCCAGGATGCTCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: EGSPRQPSAASS*RPSGRPGCSPG
Trigger: CCCTGGGGAGCATCCTGGCCTACCTGACGGACGCCAAGAGGAGGCTGCGGAAGGTTGTCTGGGTGAGCCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CAA 90 bp TGTCCCATGCCGAACACAGTGAGCCCACCCTGCACCTGCCGGAAGTaGGGGGCCCCACAGCTTCCCACGGTGCCCAGCACATCCATCTTC +
Preference number: 6 (lower is better)
Translates to: CPMPNTVSPPCTCRK*GAPQLPTVPSTSIF
Trigger: GAAGATGGATGTGCTGGGCACCGTGGGAAGCTGTGGGGCCCCCAACTTCCGGCAGGTGCAGGGTGGGCTCACTGTGTTCGGCATGGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS TCA 72 bp TGCCAGCCTTCGATGCCACCTCCTGCATCCAGGTGCTaGAGGGCCTCTGCCAGGAGTCGGCCTTCTCCAGGT +
Preference number: 6 (lower is better)
Translates to: CQPSMPPPASRC*RASARSRPSPG
Trigger: ACCTGGAGAAGGCCGACTCCTGGCAGAGGCCCTTCAGCACCTGGATGCAGGAGGTGGCATCGAAGGCTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS GCA 72 bp GGCACCATGCGGAGAAAGCTCTGGATCACCTGGAACTaGTCCATAGGCAGGGGCTTGGCCTGCGTGGGGGCA +
Preference number: 6 (lower is better)
Translates to: GTMRRKLWITWN*SIGRGLACVGA
Trigger: TGCCCCCACGCAGGCCAAGCCCCTGCCTATGGAGCAGTTCCAGGTGATCCAGAGCTTTCTCCGCATGGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS GCA 72 bp CATGGGCGTCATGGTCTCGCTGACAGTGTCCAGCGCTaGGTCCACCTCCTTCTTCACACGGTGCCCATCGGG +
Preference number: 6 (lower is better)
Translates to: HGRHGLADSVQR*VHLLLHTVPIG
Trigger: CCCGATGGGCACCGTGTGAAGAAGGAGGTGGACGCAGCGCTGGACACTGTCAGCGAGACCATGACGCCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 72 bp AGGCCCTCAAATGGGGTGCCTGCCGAGACCGTCTGCTaGGCTGTGCTGGCCGTTGTACCCATAGTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: RPSNGVPAETVC*AVLAVVPIVCQ
Trigger: CTGGCAGACTATGGGTACAACGGCCAGCACAGCCCAGCAGACGGTCTCGGCAGGCACCCCATTTGAGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 72 bp CCCTGGGGCACCATGCGGAGAAAGCTCTGGATCACCTaGAACTGCTCCATAGGCAGGGGCTTGGCCTGCGTG +
Preference number: 6 (lower is better)
Translates to: PWGTMRRKLWIT*NCSIGRGLACV
Trigger: CACGCAGGCCAAGCCCCTGCCTATGGAGCAGTTCCAGGTGATCCAGAGCTTTCTCCGCATGGTGCCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 72 bp AGGACAGCCACCACCATCGCAGTTGTGGTACGGCCCTaGCCGCTGAGGCAGCTGAACACGAAGCCAGTGCCT +
Preference number: 6 (lower is better)
Translates to: RTATTIAVVVRP*PLRQLNTKPVP
Trigger: AGGCACTGGCTTCGTGTTCAGCTGCCTCAGCGGCCAGGGCCGTACCACAACTGCGATGGTGGTGGCTGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CAA 72 bp GTACTGCAGGCTCCGCAGCTGCAGCCTCCGCATTTCTaGCGCCTCTTTCGCTGCCTTCGCCTGGCGGTAGGT +
Preference number: 6 (lower is better)
Translates to: VLQAPQLQPPHF*RLFRCLRLAVG
Trigger: ACCTACCGCCAGGCGAAGGCAGCGAAAGAGGCGCAAGAAATGCGGAGGCTGCAGCTGCGGAGCCTGCAGTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CAA 90 bp GCGCTCCAAGTACTGCAGGCTCCGCAGCTGCAGCCTCCGCATTTCTaGCGCCTCTTTCGCTGCCTTCGCCTGGCGGTAGGTGCAGATGAT +
Preference number: 6 (lower is better)
Translates to: ALQVLQAPQLQPPHF*RLFRCLRLAVGADD
Trigger: ATCATCTGCACCTACCGCCAGGCGAAGGCAGCGAAAGAGGCGCAAGAAATGCGGAGGCTGCAGCTGCGGAGCCTGCAGTACTTGGAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS TCA 72 bp CCCGCAGGTGGTAGTGCATGGGCGTCATGGTCTCGCTaGCAGTGTCCAGCGCTGCGTCCACCTCCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: PAGGSAWASWSR*QCPALRPPPSS
Trigger: TGAAGAAGGAGGTGGACGCAGCGCTGGACACTGTCAGCGAGACCATGACGCCCATGCACTACCACCTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS GCA 72 bp TGTAGGCCCTCAAATGGGGTGCCTGCCGAGACCGTCTaGTGGGCTGTGCTGGCCGTTGTACCCATAGTCTGC +
Preference number: 6 (lower is better)
Translates to: CRPSNGVPAETV*WAVLAVVPIVC
Trigger: GCAGACTATGGGTACAACGGCCAGCACAGCCCAGCAGACGGTCTCGGCAGGCACCCCATTTGAGGGCCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS GCA 72 bp AAGCTAGTGCTCTGGAAGGAGTGGATGCTGACGGAGTaGCGACTGTCCATCGTGCCACTGCCCTGTAGGCCC +
Preference number: 6 (lower is better)
Translates to: KLVLWKEWMLTE*RLSIVPLPCRP
Trigger: GGGCCTACAGGGCAGTGGCACGATGGACAGTCGGCACTCCGTCAGCATCCACTCCTTCCAGAGCACTAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS GCA 72 bp AGGAAGAGGGGCCGCTTGTACACCTCCTCCGTCACATaGAAGTCGTCCTCACCATGGATGGCCACAGCATGG +
Preference number: 6 (lower is better)
Translates to: RKRGRLYTSSVT*KSSSPWMATAW
Trigger: CCATGCTGTGGCCATCCATGGTGAGGACGACTTGCATGTGACGGAGGAGGTGTACAAGCGGCCCCTCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS GCA 72 bp GTGTCCAGCGCTGCGTCCACCTCCTTCTTCACACGGTaGCCATCGGGTAGCAGCTGCACCACCTTCATTACT +
Preference number: 6 (lower is better)
Translates to: VSSAASTSFFTR*PSGSSCTTFIT
Trigger: AGTAATGAAGGTGGTGCAGCTGCTACCCGATGGGCACCGTGTGAAGAAGGAGGTGGACGCAGCGCTGGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 72 bp ATGACACACTCCCTATGTCCGTCCTTCTGGAGTTTCTaGAGGACCCGCCTGAACCCTGAGAGGCTGGGCTGT +
Preference number: 6 (lower is better)
Translates to: MTHSLCPSFWSF*RTRLNPERLGC
Trigger: ACAGCCCAGCCTCTCAGGGTTCAGGCGGGTCCTCCAGAAACTCCAGAAGGACGGACATAGGGAGTGTGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS TCA 72 bp GCCAGGAGTCGGCCTTCTCCAGGTGGAGGTACGCGTTaGAGAGAATCAGGCAGACATAGCGCTCCAAGTACT +
Preference number: 6 (lower is better)
Translates to: ARSRPSPGGGTR*RESGRHSAPST
Trigger: AGTACTTGGAGCGCTATGTCTGCCTGATTCTCTTCAACGCGTACCTCCACCTGGAGAAGGCCGACTCCTGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS TCA 72 bp TGTTGTCCGAGAGCCGGCCCAACGTGTAATGAGCCTTaGGCAGCTCATCATGGATCTGGAACTCCTCCTTGC +
Preference number: 6 (lower is better)
Translates to: CCPRAGPTCNEP*AAHHGSGTPPC
Trigger: GCAAGGAGGAGTTCCAGATCCATGATGAGCTGCTCAAGGCTCATTACACGTTGGGCCGGCTCTCGGACAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 72 bp ATGGACTTGGCCTTGCTGTTATGCAAGCTAGTGCTCTaGAAGGAGTGGATGCTGACGGAGTGCCGACTGTCC +
Preference number: 6 (lower is better)
Translates to: MDLALLLCKLVL*KEWMLTECRLS
Trigger: GGACAGTCGGCACTCCGTCAGCATCCACTCCTTCCAGAGCACTAGCTTGCATAACAGCAAGGCCAAGTCCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 72 bp ACACAGAAGATGACACACTCCCTATGTCCGTCCTTCTaGAGTTTCTGGAGGACCCGCCTGAACCCTGAGAGG +
Preference number: 6 (lower is better)
Translates to: TQKMTHSLCPSF*SFWRTRLNPER
Trigger: CCTCTCAGGGTTCAGGCGGGTCCTCCAGAAACTCCAGAAGGACGGACATAGGGAGTGTGTCATCTTCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CAA 72 bp ACAGGGGCCACCTTGTTGGGGATGATGGACTTGGCCTaGCTGTTATGCAAGCTAGTGCTCTGGAAGGAGTGG +
Preference number: 6 (lower is better)
Translates to: TGATLLGMMDLA*LLCKLVLWKEW
Trigger: CCACTCCTTCCAGAGCACTAGCTTGCATAACAGCAAGGCCAAGTCCATCATCCCCAACAAGGTGGCCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CAA 90 bp GTGATCACAACAGGGGCCACCTTGTTGGGGATGATGGACTTGGCCTaGCTGTTATGCAAGCTAGTGCTCTGGAAGGAGTGGATGCTGACG +
Preference number: 6 (lower is better)
Translates to: VITTGATLLGMMDLA*LLCKLVLWKEWMLT
Trigger: CGTCAGCATCCACTCCTTCCAGAGCACTAGCTTGCATAACAGCAAGGCCAAGTCCATCATCCCCAACAAGGTGGCCCCTGTTGTGATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS GCA 72 bp CTTGTCTCGAGGTGTGTAGGACACAAAGTCCTCATCTaGACGCAGGAAAAGCACAGGTTCCTCCCGCACACA +
Preference number: 6 (lower is better)
Translates to: LVSRCVGHKVLI*TQEKHRFLPHT
Trigger: TGTGTGCGGGAGGAACCTGTGCTTTTCCTGCGTGCAGATGAGGACTTTGTGTCCTACACACCTCGAGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 72 bp GTGTTATGGTACACATGGTATGTGTTCTCGCTCAGCTaGGCAAAGTCGTGGATCTCTTTCCGGATGGCCAGC +
Preference number: 6 (lower is better)
Translates to: VLWYTWYVFSLS*AKSWISFRMAS
Trigger: GCTGGCCATCCGGAAAGAGATCCACGACTTTGCCCAGCTGAGCGAGAACACATACCATGTGTACCATAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CAA 90 bp TTGTACGTGATCACAACAGGGGCCACCTTGTTGGGGATGATGGACTaGGCCTTGCTGTTATGCAAGCTAGTGCTCTGGAAGGAGTGGATG +
Preference number: 6 (lower is better)
Translates to: LYVITTGATLLGMMD*ALLLCKLVLWKEWM
Trigger: CATCCACTCCTTCCAGAGCACTAGCTTGCATAACAGCAAGGCCAAGTCCATCATCCCCAACAAGGTGGCCCCTGTTGTGATCACGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CAA 90 bp AACTCCTCCTTGCAGTTGTACGTGATCACAACAGGGGCCACCTTGTaGGGGATGATGGACTTGGCCTTGCTGTTATGCAAGCTAGTGCTC +
Preference number: 6 (lower is better)
Translates to: NSSLQLYVITTGATL*GMMDLALLLCKLVL
Trigger: GAGCACTAGCTTGCATAACAGCAAGGCCAAGTCCATCATCCCCAACAAGGTGGCCCCTGTTGTGATCACGTACAACTGCAAGGAGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CAA 90 bp TGGAACTCCTCCTTGCAGTTGTACGTGATCACAACAGGGGCCACCTaGTTGGGGATGATGGACTTGGCCTTGCTGTTATGCAAGCTAGTG +
Preference number: 6 (lower is better)
Translates to: WNSSLQLYVITTGAT*LGMMDLALLLCKLV
Trigger: CACTAGCTTGCATAACAGCAAGGCCAAGTCCATCATCCCCAACAAGGTGGCCCCTGTTGTGATCACGTACAACTGCAAGGAGGAGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS GCA 72 bp TTCTTCTGGTTTTCCAAGACCACTTCTTTCAGGTCATaGAACTCGGCACAGGCAGTGATGGCTCTGTCCACC +
Preference number: 6 (lower is better)
Translates to: FFWFSKTTSFRS*NSAQAVMALST
Trigger: GGTGGACAGAGCCATCACTGCCTGTGCCGAGTTGCATGACCTGAAAGAAGTGGTCTTGGAAAACCAGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CAA 72 bp TTGCAGTTGTACGTGATCACAACAGGGGCCACCTTGTaGGGGATGATGGACTTGGCCTTGCTGTTATGCAAG +
Preference number: 6 (lower is better)
Translates to: LQLYVITTGATL*GMMDLALLLCK
Trigger: CTTGCATAACAGCAAGGCCAAGTCCATCATCCCCAACAAGGTGGCCCCTGTTGTGATCACGTACAACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263563.7
CDS CCA 72 bp GCTGGGCTCTCCGGTCGGATACCTTCTAACTTCTTCTaGTTTTCCAAGACCACTTCTTTCAGGTCATGCAAC +
Preference number: 6 (lower is better)
Translates to: AGLSGRIPSNFF*FSKTTSFRSCN
Trigger: GTTGCATGACCTGAAAGAAGTGGTCTTGGAAAACCAGAAGAAGTTAGAAGGTATCCGACCGGAGAGCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263563.7