Pregenerated sensors for PALB2 (Homo sapiens)
Ensembl gene IDs: ENSG00000083093Ensembl transcript IDs: ENST00000261584.9, ENST00000561514.1, ENST00000565038.1, ENST00000566069.5, ENST00000567003.1, ENST00000568219.5
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGTGGGAGGAGGGCAGTACACTGACCGAGAAGTAAGTCCCAAATaGCAATTGTTCCAGAAGTCAAGATTGCTGCTGCACAGTGATCTT | + |
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Preference number: 1 (lower is better) Translates to: QVGGGQYTDREVSPK*QLFQKSRLLLHSDL Trigger: AAGATCACTGTGCAGCAGCAATCTTGACTTCTGGAACAATTGCCATTTGGGACTTACTTCTCGGTCAGTGTACTGCCCTCCTCCCACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| 3UTR TCA 90 bp | AAAGACCAATGTTGGTCAGAGACAGGTGGGAGGAGGGCAGTACACTaGCCGAGAAGTAAGTCCCAAATGGCAATTGTTCCAGAAGTCAAG | + |
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Preference number: 1 (lower is better) Translates to: KDQCWSETGGRRAVH*PRSKSQMAIVPEVK Trigger: CTTGACTTCTGGAACAATTGCCATTTGGGACTTACTTCTCGGTCAGTGTACTGCCCTCCTCCCACCTGTCTCTGACCAACATTGGTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| 3UTR TCA 90 bp | CATCCAGAGCTTTCCAAAGAGAAACTACATCTTCGCAAGCAGTTATaGTACATGGCTCTTTACAACCGGCTCTTTCCCAAAACATGGCAC | + |
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Preference number: 1 (lower is better) Translates to: HPELSKEKLHLRKQL*YMALYNRLFPKTWH Trigger: GTGCCATGTTTTGGGAAAGAGCCGGTTGTAAAGAGCCATGTATCATAACTGCTTGCGAAGATGTAGTTTCTCTTTGGAAAGCTCTGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565038.1 |
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| 3UTR CCA 90 bp | AGCTTTCCAAAGAGAAACTACATCTTCGCAAGCAGTTATGATACATaGCTCTTTACAACCGGCTCTTTCCCAAAACATGGCACTCACATC | + |
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Preference number: 1 (lower is better) Translates to: SFPKRNYIFASSYDT*LFTTGSFPKHGTHI Trigger: GATGTGAGTGCCATGTTTTGGGAAAGAGCCGGTTGTAAAGAGCCATGTATCATAACTGCTTGCGAAGATGTAGTTTCTCTTTGGAAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565038.1 |
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| 3UTR-3UTR GCA 90 bp | GAACCTCTGCGAAGTGCCAGGTATAAAGTTTTTCCCACTGCCAAGCATCCAGAGGGTTGCCTGGGTTTATaGTATCAGAAGCAGGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: EPLRSARYKVFPTAKHPEGCLGL*YQKQEA Trigger: AGCTTCCTGCTTCTGATAGCATAAACCCAGGCAACC...CTCTGGATGCTTGGCAGTGGGAAAAACTTTATACCTGGCACTTCGCAGAGGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565038.1 |
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| 3UTR-3UTR GCA 90 bp | TACAACCGGCTCTTTCCCAAAACATGGCACTCACATCTACGGAACAGGAACCTGAAACCAATTGTAGGTTaGCTGGGTTTATGCTATCAG | + |
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Preference number: 2 (lower is better) Translates to: YNRLFPKTWHSHLRNRNLKPIVG*LGLCYQ Trigger: CTGATAGCATAAACCCAGGCAACCTACAATTGGTTT...CAGGTTCCTGTTCCGTAGATGTGAGTGCCATGTTTTGGGAAAGAGCCGGTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565038.1 |
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| 3UTR-3UTR TCA 90 bp | TCTGTAATACTGGAACCTCTGCGAAGTGCCAGGTATAAAGTTTTTCCCACTGCCCTTCGCAAGCAGTTATaGTACATGGCTCTTTACAAC | + |
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Preference number: 2 (lower is better) Translates to: SVILEPLRSARYKVFPTALRKQL*YMALYN Trigger: GTTGTAAAGAGCCATGTATCATAACTGCTTGCGAAG...GGCAGTGGGAAAAACTTTATACCTGGCACTTCGCAGAGGTTCCAGTATTACAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565038.1 |
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| 3UTR-3UTR GCA 90 bp | ATGAGAGTCTGTACCCGACCATTTCACAAAAGACCAATGTTGGTCAGAGACAGGTCCAGAAGTCAAGATTaGTGCTGCACAGTGATCTTT | + |
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Preference number: 2 (lower is better) Translates to: MRVCTRPFHKRPMLVRDRSRSQD*CCTVIF Trigger: AAAGATCACTGTGCAGCAGCAATCTTGACTTCTGGA...CCTGTCTCTGACCAACATTGGTCTTTTGTGAAATGGTCGGGTACAGACTCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| 3UTR-3UTR CCA 90 bp | ATGAGAGTCTGTACCCGACCATTTCACAAAAGACCAATGTTGGTCAGAGACAGGGAAGTAAGTCCCAAATaGCAATTGTTCCAGAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: MRVCTRPFHKRPMLVRDREVSPK*QLFQKS Trigger: TGACTTCTGGAACAATTGCCATTTGGGACTTACTTC...CCTGTCTCTGACCAACATTGGTCTTTTGTGAAATGGTCGGGTACAGACTCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| 3UTR TCA 72 bp | TGTTGGTCAGAGACAGGTGGGAGGAGGGCAGTACACTaGCCGAGAAGTAAGTCCCAAATGGCAATTGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: CWSETGGRRAVH*PRSKSQMAIVP Trigger: TGGAACAATTGCCATTTGGGACTTACTTCTCGGTCAGTGTACTGCCCTCCTCCCACCTGTCTCTGACCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| 3UTR CCA 72 bp | GGAGGGCAGTACACTGACCGAGAAGTAAGTCCCAAATaGCAATTGTTCCAGAAGTCAAGATTGCTGCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: GGQYTDREVSPK*QLFQKSRLLLH Trigger: GTGCAGCAGCAATCTTGACTTCTGGAACAATTGCCATTTGGGACTTACTTCTCGGTCAGTGTACTGCCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| 3UTR-3UTR CAA 90 bp | AGAGTCTGTACCCGACCATTTCACAAAAGACCAATGTTGGTCAGAGACAGGTGGTTCCAGAAGTCAAGATaGCTGCTGCACAGTGATCTT | + |
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Preference number: 3 (lower is better) Translates to: RVCTRPFHKRPMLVRDRWFQKSR*LLHSDL Trigger: AAGATCACTGTGCAGCAGCAATCTTGACTTCTGGAA...CCACCTGTCTCTGACCAACATTGGTCTTTTGTGAAATGGTCGGGTACAGACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| 3UTR-3UTR CAA 90 bp | GAGTCTGTACCCGACCATTTCACAAAAGACCAATGTTGGTCAGAGACAGGTGGGAGTCCCAAATGGCAATaGTTCCAGAAGTCAAGATTG | + |
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Preference number: 3 (lower is better) Translates to: ESVPDHFTKDQCWSETGGSPKWQ*FQKSRL Trigger: CAATCTTGACTTCTGGAACAATTGCCATTTGGGACT...CCCACCTGTCTCTGACCAACATTGGTCTTTTGTGAAATGGTCGGGTACAGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| 3UTR-3UTR CAA 90 bp | ATCTTCGCAAGCAGTTATGATACATGGCTCTTTACAACCGGCTCTTTCCCAAAAGAAACCAATTGTAGGTaGCCTGGGTTTATGCTATCA | + |
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Preference number: 3 (lower is better) Translates to: IFASSYDTWLFTTGSFPKETNCR*PGFMLS Trigger: TGATAGCATAAACCCAGGCAACCTACAATTGGTTTC...TTTTGGGAAAGAGCCGGTTGTAAAGAGCCATGTATCATAACTGCTTGCGAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565038.1 |
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| 3UTR TCA 72 bp | CTTTCCAAAGAGAAACTACATCTTCGCAAGCAGTTATaGTACATGGCTCTTTACAACCGGCTCTTTCCCAAA | + |
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Preference number: 3 (lower is better) Translates to: LSKEKLHLRKQL*YMALYNRLFPK Trigger: TTTGGGAAAGAGCCGGTTGTAAAGAGCCATGTATCATAACTGCTTGCGAAGATGTAGTTTCTCTTTGGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565038.1 |
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| CDS-3UTR CCA 90 bp | TACCCGACCATTTCACAAAAGACCAATGTTGGTCAGAGACAGGTGGGAGGAGGGTTGGTCAGAGACAGGTaGGAGGAGGGCAGTACACTG | + |
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Preference number: 4 (lower is better) Translates to: YPTISQKTNVGQRQVGGGLVRDR*EEGSTL Trigger: CAGTGTACTGCCCTCCTCCCACCTGTCTCTGACCAA...CCCTCCTCCCACCTGTCTCTGACCAACATTGGTCTTTTGTGAAATGGTCGGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| CDS-3UTR TCA 90 bp | GAGTCTGTACCCGACCATTTCACAAAAGACCAATGTTGGTCAGAGACAGGTGGGTGTCCAGCCAGCAAATaGGAGTCTGTACCCGACCAT | + |
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Preference number: 4 (lower is better) Translates to: ESVPDHFTKDQCWSETGGCPASK*ESVPDH Trigger: ATGGTCGGGTACAGACTCTCATTTGCTGGCTGGACA...CCCACCTGTCTCTGACCAACATTGGTCTTTTGTGAAATGGTCGGGTACAGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| CDS-3UTR TCA 90 bp | ATTTCACAAAAGACCAATGTTGGTCAGAGACAGGTGGGAGGAGGGCAGTACACTAGGAGGGCAGTACACTaGCCGAGAAGTAAGTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: ISQKTNVGQRQVGGGQYTRRAVH*PRSKSQ Trigger: TTGGGACTTACTTCTCGGTCAGTGTACTGCCCTCCT...AGTGTACTGCCCTCCTCCCACCTGTCTCTGACCAACATTGGTCTTTTGTGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| CDS-3UTR CCA 90 bp | TACCCGACCATTTCACAAAAGACCAATGTTGGTCAGAGACAGGTGGGAGGAGGGACAAAAGACCAATGTTaGTCAGAGACAGGTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: YPTISQKTNVGQRQVGGGTKDQC*SETGGR Trigger: CCTCCCACCTGTCTCTGACCAACATTGGTCTTTTGT...CCCTCCTCCCACCTGTCTCTGACCAACATTGGTCTTTTGTGAAATGGTCGGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| CDS-3UTR GCA 90 bp | TACCCGACCATTTCACAAAAGACCAATGTTGGTCAGAGACAGGTGGGAGGAGGGAGTCAAGATTGCTGCTaGACAGTGATCTTTCACGTC | + |
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Preference number: 4 (lower is better) Translates to: YPTISQKTNVGQRQVGGGSQDCC*TVIFHV Trigger: GACGTGAAAGATCACTGTGCAGCAGCAATCTTGACT...CCCTCCTCCCACCTGTCTCTGACCAACATTGGTCTTTTGTGAAATGGTCGGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| CDS-3UTR TCA 90 bp | AACCGGCTCTTTCCCAAAACATGGCACTCACATCTACGGAACAGGAACCTGAAGGGTGAGAGATCCTGCTaGGACAAACAATCTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: NRLFPKTWHSHLRNRNLKGERSC*DKQSCS Trigger: AGAACAAGATTGTTTGTCTCAGCAGGATCTCTCACC...CTTCAGGTTCCTGTTCCGTAGATGTGAGTGCCATGTTTTGGGAAAGAGCCGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565038.1 |
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| CDS-3UTR GCA 90 bp | ATGGCTCTTTACAACCGGCTCTTTCCCAAAACATGGCACTCACATCTACGGAACAGAAGCAGGAAGCTCTaGTGTTTCAGTCTGAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: MALYNRLFPKTWHSHLRNRSRKL*CFSLSV Trigger: AACACTCAGACTGAAACAGCAGAGCTTCCTGCTTCT...GTTCCGTAGATGTGAGTGCCATGTTTTGGGAAAGAGCCGGTTGTAAAGAGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565038.1 |
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| 3UTR CAA 72 bp | CAGTACACTGACCGAGAAGTAAGTCCCAAATGGCAATaGTTCCAGAAGTCAAGATTGCTGCTGCACAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: QYTDREVSPKWQ*FQKSRLLLHSD Trigger: ATCACTGTGCAGCAGCAATCTTGACTTCTGGAACAATTGCCATTTGGGACTTACTTCTCGGTCAGTGTACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| CDS-3UTR TCA 90 bp | CCAAATGGCAATTGTTCCAGAAGTCAAGATTGCTGCTGCACAGTGATCTTTCACGGCTTTGTGACAGACTaGAGCTTGGTAAGAATCATC | + |
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Preference number: 4 (lower is better) Translates to: PNGNCSRSQDCCCTVIFHGFVTD*SLVRII Trigger: GATGATTCTTACCAAGCTTCAGTCTGTCACAAAGCC...GTGAAAGATCACTGTGCAGCAGCAATCTTGACTTCTGGAACAATTGCCATTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| CDS-3UTR TCA 90 bp | TATATTTCCATCTTTTTGTCCAGCCAGCAAATGAGAGTCTGTACCCGACCATTTATTGCTGCTGCACAGTaGTCTTTCACGTCACCTTCC | + |
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Preference number: 4 (lower is better) Translates to: YISIFLSSQQMRVCTRPFIAAAQ*SFTSPS Trigger: GGAAGGTGACGTGAAAGATCACTGTGCAGCAGCAAT...AAATGGTCGGGTACAGACTCTCATTTGCTGGCTGGACAAAAAGATGGAAATATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| CDS-3UTR GCA 90 bp | ATCTTCGCAAGCAGTTATGATACATGGCTCTTTACAACCGGCTCTTTCCCAAAAGGTTGCCTGGGTTTATaGTATCAGAAGCAGGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: IFASSYDTWLFTTGSFPKGCLGL*YQKQEA Trigger: AGCTTCCTGCTTCTGATAGCATAAACCCAGGCAACC...TTTTGGGAAAGAGCCGGTTGTAAAGAGCCATGTATCATAACTGCTTGCGAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565038.1 |
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| CDS-3UTR CCA 90 bp | AGAGTCTGTACCCGACCATTTCACAAAAGACCAATGTTGGTCAGAGACAGGTGGGAAGTAAGTCCCAAATaGCAATTGTTCCAGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: RVCTRPFHKRPMLVRDRWEVSPK*QLFQKS Trigger: TGACTTCTGGAACAATTGCCATTTGGGACTTACTTC...CCACCTGTCTCTGACCAACATTGGTCTTTTGTGAAATGGTCGGGTACAGACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| CDS-3UTR CCA 90 bp | ATCTTCGCAAGCAGTTATGATACATGGCTCTTTACAACCGGCTCTTTCCCAAAACTCTTTCCCAAAACATaGCACTCACATCTACGGAAC | + |
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Preference number: 4 (lower is better) Translates to: IFASSYDTWLFTTGSFPKLFPKT*HSHLRN Trigger: GTTCCGTAGATGTGAGTGCCATGTTTTGGGAAAGAG...TTTTGGGAAAGAGCCGGTTGTAAAGAGCCATGTATCATAACTGCTTGCGAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565038.1 |
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| 3UTR CAA 72 bp | CCTGAAGGATTCTTTAACTCTGAAACCAATTGTAGGTaGCCTGGGTTTATGCTATCAGAAGCAGGAAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: PEGFFNSETNCR*PGFMLSEAGSS Trigger: AGAGCTTCCTGCTTCTGATAGCATAAACCCAGGCAACCTACAATTGGTTTCAGAGTTAAAGAATCCTTCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565038.1 |
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| CDS-3UTR TCA 90 bp | CAAAACATGGCACTCACATCTACGGAACAGGAACCTGAAGGATTCTTTAACTCTCTTCGCAAGCAGTTATaGTACATGGCTCTTTACAAC | + |
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Preference number: 4 (lower is better) Translates to: QNMALTSTEQEPEGFFNSLRKQL*YMALYN Trigger: GTTGTAAAGAGCCATGTATCATAACTGCTTGCGAAG...AGAGTTAAAGAATCCTTCAGGTTCCTGTTCCGTAGATGTGAGTGCCATGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565038.1 |
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| CDS-3UTR GCA 90 bp | AACATGGCACTCACATCTACGGAACAGGAACCTGAAGGATTCTTTAACTCTGAAAAACCAATTGTAGGTTaGCTGGGTTTATGCTATCAG | + |
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Preference number: 4 (lower is better) Translates to: NMALTSTEQEPEGFFNSEKPIVG*LGLCYQ Trigger: CTGATAGCATAAACCCAGGCAACCTACAATTGGTTT...TTCAGAGTTAAAGAATCCTTCAGGTTCCTGTTCCGTAGATGTGAGTGCCATGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565038.1 |
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| CDS-3UTR CCA 90 bp | AGAGCTTTCCAAAGAGAAACTACATCTTCGCAAGCAGTTATGATACATGGCTCTAGCAGTTATGATACATaGCTCTTTACAACCGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: RAFQRETTSSQAVMIHGSSSYDT*LFTTGS Trigger: AGAGCCGGTTGTAAAGAGCCATGTATCATAACTGCT...AGAGCCATGTATCATAACTGCTTGCGAAGATGTAGTTTCTCTTTGGAAAGCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565038.1 |
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| CDS CCA 90 bp | CGGGACCCAGTTGGCCCTGGGCCGGGGAGGCGCCCCAGGAAGGAATaGGGAGCCCGGGATCGCACCCTCAGTGCGCGATCAGCTGACCCA | + |
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Preference number: 5 (lower is better) Translates to: RDPVGPGPGRRPRKE*GARDRTLSARSADP Trigger: TGGGTCAGCTGATCGCGCACTGAGGGTGCGATCCCGGGCTCCCCATTCCTTCCTGGGGCGCCTCCCCGGCCCAGGGCCAACTGGGTCCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261584.9 |
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| CDS GCA 90 bp | GGTGTTCCTGGCGGGACAGAGTCACAGTCACAGGTAGGTTGTCCTTaGCTGCCTGACACTTGCAGGGTGGTATGTGGTTTTGCTGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: GVPGGTESQSQVGCP*LPDTCRVVCGFAGL Trigger: CAGCCCAGCAAAACCACATACCACCCTGCAAGTGTCAGGCAGGCAAGGACAACCTACCTGTGACTGTGACTCTGTCCCGCCAGGAACACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS GCA 90 bp | ACAGAGTCACAGTCACAGGTAGGTTGTCCTTGCCTGCCTGACACTTaGAGGGTGGTATGTGGTTTTGCTGGGCTGCCTGAACTGTCGAAT | + |
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Preference number: 5 (lower is better) Translates to: TESQSQVGCPCLPDT*RVVCGFAGLPELSN Trigger: ATTCGACAGTTCAGGCAGCCCAGCAAAACCACATACCACCCTGCAAGTGTCAGGCAGGCAAGGACAACCTACCTGTGACTGTGACTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS TCA 90 bp | ATCACACCCACGCTGAGAGTCGTCTTAGGGTTAATCACAATGAGCTaGAACACAGGGCTTCGCAACGACTCACTCTCTTTGGCACAGGGA | + |
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Preference number: 5 (lower is better) Translates to: ITPTLRVVLGLITMS*NTGLRNDSLSLAQG Trigger: TCCCTGTGCCAAAGAGAGTGAGTCGTTGCGAAGCCCTGTGTTTCAGCTCATTGTGATTAACCCTAAGACGACTCTCAGCGTGGGTGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS GCA 90 bp | AGCAAGTTGGGGTGTGCAGCAAGTTCGTCCAGCAACTTCTGTAGATaGTTTTTCATAGGAGCCTTGAGGGCCAAAGGCTGGAGTAGTACC | + |
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Preference number: 5 (lower is better) Translates to: SKLGCAASSSSNFCR*FFIGALRAKGWSST Trigger: GGTACTACTCCAGCCTTTGGCCCTCAAGGCTCCTATGAAAAAGCATCTACAGAAGTTGCTGGACGAACTTGCTGCACACCCCAACTTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS TCA 90 bp | CTCCTGGCATGTGTTTCTACAGAGCTGATTTTCTTTAAAAGTGAATaGCTCAATGGGTGGAGGTGTTCCTGGCGGGACAGAGTCACAGTC | + |
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Preference number: 5 (lower is better) Translates to: LLACVSTELIFFKSE*LNGWRCSWRDRVTV Trigger: GACTGTGACTCTGTCCCGCCAGGAACACCTCCACCCATTGAGTCATTCACTTTTAAAGAAAATCAGCTCTGTAGAAACACATGCCAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS GCA 90 bp | TGCAGGAAACAGAAGGCCTTCAGGCACTGTGCAAGAATGTTTTTCTaGAGAAAGAGGAGAGGTTGCTTCCAGGCTAAGACTCTTAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: CRKQKAFRHCARMFF*RKRRGCFQAKTLRL Trigger: CAACCTAAGAGTCTTAGCCTGGAAGCAACCTCTCCTCTTTCTGCAGAAAAACATTCTTGCACAGTGCCTGAAGGCCTTCTGTTTCCTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS CCA 90 bp | GTGCAGGCTGATTTTCTTTTTCCTGTGTATCTTCTACCAGGTGCTTaGGCAACTGCCTTCCTAGACAAGTCATTATCTTCAGTGGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: VQADFLFPVYLLPGA*ATAFLDKSLSSVGP Trigger: TGGGCCCACTGAAGATAATGACTTGTCTAGGAAGGCAGTTGCCCAAGCACCTGGTAGAAGATACACAGGAAAAAGAAAATCAGCCTGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS TCA 90 bp | TCTTTGCCTCCTCCATCTTCTGCAAACGTCATGACTTCTACTTGTTaGTCAGAAAGGGTCCCACTGCTACTAACTAGCCTCCTCTTTGTC | + |
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Preference number: 5 (lower is better) Translates to: SLPPPSSANVMTSTC*SERVPLLLTSLLFV Trigger: GACAAAGAGGAGGCTAGTTAGTAGCAGTGGGACCCTTTCTGATCAACAAGTAGAAGTCATGACGTTTGCAGAAGATGGAGGAGGCAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS CCA 90 bp | CTTGGCAGCTTCTGCTTTTGCTCACCACTAGGGTCACTGACCCTGTaGGGAAAATGTTCTTGGGTGTCATCTGTTCTTTGTATAGGTAAT | + |
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Preference number: 5 (lower is better) Translates to: LGSFCFCSPLGSLTL*GKCSWVSSVLCIGN Trigger: ATTACCTATACAAAGAACAGATGACACCCAAGAACATTTTCCCCACAGGGTCAGTGACCCTAGTGGTGAGCAAAAGCAGAAGCTGCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000261584.9 ENST00000567003.1 ENST00000568219.5 |
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| CDS-3UTR CAA 90 bp | TACCCGACCATTTCACAAAAGACCAATGTTGGTCAGAGACAGGTGGGAGGAGGGTATATTTCCATCTTTTaGTCCAGCCAGCAAATGAGA | + |
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Preference number: 5 (lower is better) Translates to: YPTISQKTNVGQRQVGGGYISIF*SSQQMR Trigger: TCTCATTTGCTGGCTGGACAAAAAGATGGAAATATA...CCCTCCTCCCACCTGTCTCTGACCAACATTGGTCTTTTGTGAAATGGTCGGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| CDS TCA 90 bp | TCGAATTGTTTAGTATCACTGGCAAGACAGACTGAGTCTTTCAAATaGGCAAGTTGGGGTGTGCAGCAAGTTCGTCCAGCAACTTCTGTA | + |
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Preference number: 5 (lower is better) Translates to: SNCLVSLARQTESFK*ASWGVQQVRPATSV Trigger: TACAGAAGTTGCTGGACGAACTTGCTGCACACCCCAACTTGCTCATTTGAAAGACTCAGTCTGTCTTGCCAGTGATACTAAACAATTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS TCA 90 bp | TCCCAAATGGCAATTGTTCCAGAAGTCAAGATTGCTGCTGCACAGTaGTCTTTCACGTCACCTTCCAGGAACCATTTCAGAATAGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: SQMAIVPEVKIAAAQ*SFTSPSRNHFRIGF Trigger: AAAGCCTATTCTGAAATGGTTCCTGGAAGGTGACGTGAAAGATCACTGTGCAGCAGCAATCTTGACTTCTGGAACAATTGCCATTTGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| CDS-3UTR CAA 90 bp | CCAAATGGCAATTGTTCCAGAAGTCAAGATTGCTGCTGCACAGTGATCTTTCACTTCCAGAAGTCAAGATaGCTGCTGCACAGTGATCTT | + |
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Preference number: 5 (lower is better) Translates to: PNGNCSRSQDCCCTVIFHFQKSR*LLHSDL Trigger: AAGATCACTGTGCAGCAGCAATCTTGACTTCTGGAA...GTGAAAGATCACTGTGCAGCAGCAATCTTGACTTCTGGAACAATTGCCATTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| CDS-3UTR CAA 90 bp | TATATTTCCATCTTTTTGTCCAGCCAGCAAATGAGAGTCTGTACCCGACCATTTCACAAAAGACCAATGTaGGTCAGAGACAGGTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: YISIFLSSQQMRVCTRPFHKRPM*VRDRWE Trigger: CTCCCACCTGTCTCTGACCAACATTGGTCTTTTGTG...AAATGGTCGGGTACAGACTCTCATTTGCTGGCTGGACAAAAAGATGGAAATATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| CDS TCA 90 bp | TCGACGGAATGTTTATGCAGCTCCTGGCATGTGTTTCTACAGAGCTaGTTTTCTTTAAAAGTGAATGACTCAATGGGTGGAGGTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: STECLCSSWHVFLQS*FSLKVNDSMGGGVP Trigger: AGGAACACCTCCACCCATTGAGTCATTCACTTTTAAAGAAAATCAGCTCTGTAGAAACACATGCCAGGAGCTGCATAAACATTCCGTCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS GCA 90 bp | CCTCTGGCAATTGGACATGCTTCGTGTTGTTCTAACATAATATTCTaGAGGAAACAGAAGGCCTTCAGGCACTGTGCAAGAATGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLAIGHASCCSNIIF*RKQKAFRHCARMFF Trigger: GAAAAACATTCTTGCACAGTGCCTGAAGGCCTTCTGTTTCCTGCAGAATATTATGTTAGAACAACACGAAGCATGTCCAATTGCCAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS GCA 90 bp | AACAGGAACCTGAAGGATTCTTTAACTCTGAAACCAATTGTAGGTTaGCTGGGTTTATGCTATCAGAAGCAGGAAGCTCTGCTGTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: NRNLKDSLTLKPIVG*LGLCYQKQEALLFQ Trigger: CTGAAACAGCAGAGCTTCCTGCTTCTGATAGCATAAACCCAGGCAACCTACAATTGGTTTCAGAGTTAAAGAATCCTTCAGGTTCCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000261584.9 ENST00000565038.1 ENST00000568219.5 |
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| CDS CCA 90 bp | ATGTTGTTCATAATAGTAGTACCAAGCAGAGCTTCTTGCATCCCTTaGACCTCAGCAAAAGTTAGTATAGTCTCCTCAGGGGGCATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: MLFIIVVPSRASCIP*TSAKVSIVSSGGIK Trigger: TTTGATGCCCCCTGAGGAGACTATACTAACTTTTGCTGAGGTCCAAGGGATGCAAGAAGCTCTGCTTGGTACTACTATTATGAACAACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS-3UTR CAA 90 bp | TCTTCGCAAGCAGTTATGATACATGGCTCTTTACAACCGGCTCTTTCCCAAAACGAAACCAATTGTAGGTaGCCTGGGTTTATGCTATCA | + |
|
Preference number: 5 (lower is better) Translates to: SSQAVMIHGSLQPALSQNETNCR*PGFMLS Trigger: TGATAGCATAAACCCAGGCAACCTACAATTGGTTTC...GTTTTGGGAAAGAGCCGGTTGTAAAGAGCCATGTATCATAACTGCTTGCGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565038.1 |
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| CDS-3UTR CAA 90 bp | CCAAATGGCAATTGTTCCAGAAGTCAAGATTGCTGCTGCACAGTGATCTTTCACAGTCCCAAATGGCAATaGTTCCAGAAGTCAAGATTG | + |
|
Preference number: 5 (lower is better) Translates to: PNGNCSRSQDCCCTVIFHSPKWQ*FQKSRL Trigger: CAATCTTGACTTCTGGAACAATTGCCATTTGGGACT...GTGAAAGATCACTGTGCAGCAGCAATCTTGACTTCTGGAACAATTGCCATTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| CDS TCA 90 bp | ACGTCACCTTCCAGGAACCATTTCAGAATAGGCTTTGTGACAGACTaGAGCTTGGTAAGAATCATCAATGTGCATCTTTTTCAGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TSPSRNHFRIGFVTD*SLVRIINVHLFQEL Trigger: CAACTCCTGAAAAAGATGCACATTGATGATTCTTACCAAGCTTCAGTCTGTCACAAAGCCTATTCTGAAATGGTTCCTGGAAGGTGACGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| CDS GCA 90 bp | AGCAAGGTAGATAAACATGTCCTGACAGGAAAGCTAAACGGAACCTaGAGAACCATTCAGATCATACCATTTATGAACATTCCCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SKVDKHVLTGKLNGT*RTIQIIPFMNIPFS Trigger: GGAGAAGGGAATGTTCATAAATGGTATGATCTGAATGGTTCTGCAGGTTCCGTTTAGCTTTCCTGTCAGGACATGTTTATCTACCTTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561514.1 |
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| CDS GCA 90 bp | CAAATAACAATGTTGTTCATAATAGTAGTACCAAGCAGAGCTTCTTaGATCCCTTGGACCTCAGCAAAAGTTAGTATAGTCTCCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QITMLFIIVVPSRAS*IPWTSAKVSIVSSG Trigger: CCCTGAGGAGACTATACTAACTTTTGCTGAGGTCCAAGGGATGCAAGAAGCTCTGCTTGGTACTACTATTATGAACAACATTGTTATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS TCA 90 bp | GTAGTTGCTTTAAACTCAGCATTCCATCCCTATGAAATGGAGCCGTaGAAGCATCATCATCCAAGGATAAATAAGCACTATTACTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VVALNSAFHPYEMEP*KHHHPRINKHYYSK Trigger: CTTGGAGTAATAGTGCTTATTTATCCTTGGATGATGATGCTTTCACGGCTCCATTTCATAGGGATGGAATGCTGAGTTTAAAGCAACTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS TCA 90 bp | GACAATAAAGAGAAGCCCCATTTCAGAATAGGCTTTGTGACAGACTaGAGCTTGGTAAGAATCATCAATGTGCATCTTTTTCAGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DNKEKPHFRIGFVTD*SLVRIINVHLFQEL Trigger: CAACTCCTGAAAAAGATGCACATTGATGATTCTTACCAAGCTTCAGTCTGTCACAAAGCCTATTCTGAAATGGGGCTTCTCTTTATTGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS TCA 90 bp | ACTGGTTCTGGAGAATCTGGAAGTTCAGATTTAAGACTTAAAAGGTaGGTTCTTATTTCAGTTACTGGTGATCTAGCAGGATTTTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: TGSGESGSSDLRLKR*VLISVTGDLAGFLL Trigger: TAGCAAAAATCCTGCTAGATCACCAGTAACTGAAATAAGAACTCACCTTTTAAGTCTTAAATCTGAACTTCCAGATTCTCCAGAACCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS TCA 90 bp | TTCACTTTTTCAAGCTTAAGAGGTCCAAAGTCTTCATCAGGTAACTaGAAGTCTGTGATACTGAGAAAAGACAGTAGTTGCTTTAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: FTFSSLRGPKSSSGN*KSVILRKDSSCFKL Trigger: GAGTTTAAAGCAACTACTGTCTTTTCTCAGTATCACAGACTTTCAGTTACCTGATGAAGACTTTGGACCTCTTAAGCTTGAAAAAGTGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS GCA 72 bp | CAGAACGAAAAGAGCAGCCGTCGCCGACCCCAGGCCTaGCGACACCGGGACCCAGTTGGCCCTGGGCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QNEKSSRRRPQA*RHRDPVGPGPG Trigger: CCCCGGCCCAGGGCCAACTGGGTCCCGGTGTCGGCAGGCCTGGGGTCGGCGACGGCTGCTCTTTTCGTTCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000261584.9 ENST00000567003.1 ENST00000568219.5 |
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| CDS GCA 72 bp | AGGCAGGAGAGTCGCTTGATCCCAGGAAGCGGAGGTTaGAGTGAGCCGAGATCGCGCCACTGCACCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RQESRLIPGSGG*SEPRSRHCTPA Trigger: TGCTGGGGTGCAGTGGCGCGATCTCGGCTCACTGCAACCTCCGCTTCCTGGGATCAAGCGACTCTCCTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561514.1 |
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| CDS TCA 72 bp | CAGGTATCTCTAGTACCTTTTCCTTCTCCTCACAGCTaGGGGGCTTCCCGGGAGGCTCGTCCATCGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QVSLVPFPSPHS*GASREARPSGR Trigger: CCTGCCCGATGGACGAGCCTCCCGGGAAGCCCCTCAGCTGTGAGGAGAAGGAAAAGGTACTAGAGATACCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567003.1 |
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| CDS GCA 72 bp | CAGTCACAGGTAGGTTGTCCTTGCCTGCCTGACACTTaGAGGGTGGTATGTGGTTTTGCTGGGCTGCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: QSQVGCPCLPDT*RVVCGFAGLPE Trigger: TTCAGGCAGCCCAGCAAAACCACATACCACCCTGCAAGTGTCAGGCAGGCAAGGACAACCTACCTGTGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS GCA 72 bp | GGCGGGACAGAGTCACAGTCACAGGTAGGTTGTCCTTaGCTGCCTGACACTTGCAGGGTGGTATGTGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: GGTESQSQVGCP*LPDTCRVVCGF Trigger: AAAACCACATACCACCCTGCAAGTGTCAGGCAGGCAAGGACAACCTACCTGTGACTGTGACTCTGTCCCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS TCA 72 bp | AGAGTCACAGTCACAGGTAGGTTGTCCTTGCCTGCCTaGCACTTGCAGGGTGGTATGTGGTTTTGCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RVTVTGRLSLPA*HLQGGMWFCWA Trigger: AGCCCAGCAAAACCACATACCACCCTGCAAGTGTCAGGCAGGCAAGGACAACCTACCTGTGACTGTGACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS GCA 72 bp | CTCTTCTGCTGCTTCTTTCTTCTGCTTGGCAGCTTCTaGTTTTGCTCACCACTAGGGTCACTGACCCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LFCCFFLLLGSF*FCSPLGSLTLW Trigger: CCACAGGGTCAGTGACCCTAGTGGTGAGCAAAAGCAGAAGCTGCCAAGCAGAAGAAAGAAGCAGCAGAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000261584.9 ENST00000567003.1 ENST00000568219.5 |
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| CDS GCA 72 bp | GGGTGTGCAGCAAGTTCGTCCAGCAACTTCTGTAGATaGTTTTTCATAGGAGCCTTGAGGGCCAAAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GCAASSSSNFCR*FFIGALRAKGW Trigger: CCAGCCTTTGGCCCTCAAGGCTCCTATGAAAAAGCATCTACAGAAGTTGCTGGACGAACTTGCTGCACACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS TCA 72 bp | GCAATTGTTCCAGAAGTCAAGATTGCTGCTGCACAGTaGTCTTTCACGTCACCTTCCAGGAACCTGCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AIVPEVKIAAAQ*SFTSPSRNLPA Trigger: GGCTGGCAGGTTCCTGGAAGGTGACGTGAAAGATCACTGTGCAGCAGCAATCTTGACTTCTGGAACAATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS TCA 72 bp | GGGCTTCGCAACGACTCACTCTCTTTGGCACAGGGATaGCTCAGGACAATAAAGAGAAGCCCCATTTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GLRNDSLSLAQG*LRTIKRSPISE Trigger: TTCTGAAATGGGGCTTCTCTTTATTGTCCTGAGTCATCCCTGTGCCAAAGAGAGTGAGTCGTTGCGAAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS CAA 90 bp | GACCGAGAAGTAAGTCCCAAATGGCAATTGTTCCAGAAGTCAAGATaGCTGCTGCACAGTGATCTTTCACGTCACCTTCCAGGAACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: DREVSPKWQLFQKSR*LLHSDLSRHLPGTC Trigger: GCAGGTTCCTGGAAGGTGACGTGAAAGATCACTGTGCAGCAGCAATCTTGACTTCTGGAACAATTGCCATTTGGGACTTACTTCTCGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS CAA 90 bp | GGAGGAGGGCAGTACACTGACCGAGAAGTAAGTCCCAAATGGCAATaGTTCCAGAAGTCAAGATTGCTGCTGCACAGTGATCTTTCACGT | + |
|
Preference number: 6 (lower is better) Translates to: GGGQYTDREVSPKWQ*FQKSRLLLHSDLSR Trigger: ACGTGAAAGATCACTGTGCAGCAGCAATCTTGACTTCTGGAACAATTGCCATTTGGGACTTACTTCTCGGTCAGTGTACTGCCCTCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000261584.9 ENST00000566069.5 ENST00000568219.5 |
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| CDS TCA 72 bp | CACTTGCAGGGTGGTATGTGGTTTTGCTGGGCTGCCTaGACTGTCGAATTGTTTAGTATCACTGGCAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: HLQGGMWFCWAA*TVELFSITGKT Trigger: TGTCTTGCCAGTGATACTAAACAATTCGACAGTTCAGGCAGCCCAGCAAAACCACATACCACCCTGCAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS TCA 72 bp | ACGCTGAGAGTCGTCTTAGGGTTAATCACAATGAGCTaGAACACAGGGCTTCGCAACGACTCACTCTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TLRVVLGLITMS*NTGLRNDSLSL Trigger: CAAAGAGAGTGAGTCGTTGCGAAGCCCTGTGTTTCAGCTCATTGTGATTAACCCTAAGACGACTCTCAGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS GCA 72 bp | TTTTCCTGTGTATCTTCTACCAGGTGCTTGGGCAACTaGCTTCCTAGACAAGTCATTATCTTCAGTGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: FSCVSSTRCLGN*LPRQVIIFSGP Trigger: GGGCCCACTGAAGATAATGACTTGTCTAGGAAGGCAGTTGCCCAAGCACCTGGTAGAAGATACACAGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS GCA 72 bp | GTTGCCTGGGTTTATGCTATCAGAAGCAGGAAGCTCTaGTGTTTCAGTCTGAGTGTTTTAGCTGCGGTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VAWVYAIRSRKL*CFSLSVLAAVR Trigger: TCTCACCGCAGCTAAAACACTCAGACTGAAACAGCAGAGCTTCCTGCTTCTGATAGCATAAACCCAGGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565038.1 |
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| CDS CAA 72 bp | CACTATGTTCTCTGTTTCTCCCCATCATCCAGATCCTaGAAGGTAGCAGGAACTGCCATCCTCAGTCACTCA | + |
|
Preference number: 6 (lower is better) Translates to: HYVLCFSPSSRS*KVAGTAILSHS Trigger: TGAGTGACTGAGGATGGCAGTTCCTGCTACCTTCAAGGATCTGGATGATGGGGAGAAACAGAGAACATAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567003.1 |
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| CDS CAA 90 bp | GACCGAGAAGTAAGTCCCAAATGGCAATTGTTCCAGAAGTCAAGATaGCTGCTGCACAGTGATCTTTCACGTCACCTTCCAGGAACCATT | + |
|
Preference number: 6 (lower is better) Translates to: DREVSPKWQLFQKSR*LLHSDLSRHLPGTI Trigger: AATGGTTCCTGGAAGGTGACGTGAAAGATCACTGTGCAGCAGCAATCTTGACTTCTGGAACAATTGCCATTTGGGACTTACTTCTCGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| CDS TCA 72 bp | TTAGTATCACTGGCAAGACAGACTGAGTCTTTCAAATaGGCAAGTTGGGGTGTGCAGCAAGTTCGTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LVSLARQTESFK*ASWGVQQVRPA Trigger: TGCTGGACGAACTTGCTGCACACCCCAACTTGCTCATTTGAAAGACTCAGTCTGTCTTGCCAGTGATACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS TCA 72 bp | CCTCCATCTTCTGCAAACGTCATGACTTCTACTTGTTaGTCAGAAAGGGTCCCACTGCTACTAACTAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PPSSANVMTSTC*SERVPLLLTSL Trigger: GAGGCTAGTTAGTAGCAGTGGGACCCTTTCTGATCAACAAGTAGAAGTCATGACGTTTGCAGAAGATGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS TCA 72 bp | GGTTTTCTTTGCCTCCTCCATCTTCTGCAAACGTCATaGCTTCTACTTGTTGATCAGAAAGGGTCCCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: GFLCLLHLLQTS*LLLVDQKGSHC Trigger: GCAGTGGGACCCTTTCTGATCAACAAGTAGAAGTCATGACGTTTGCAGAAGATGGAGGAGGCAAAGAAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS GCA 72 bp | ATGGATGAAGAAAGGCCCGTCTTTGTATGCTGGCTTTaGGAGTTTGGCCTTTTGGGATGTGATTTTCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: MDEERPVFVCWL*EFGLLGCDFPG Trigger: ACCAGGAAAATCACATCCCAAAAGGCCAAACTCGCAAAGCCAGCATACAAAGACGGGCCTTTCTTCATCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS GCA 72 bp | GTTGCCTGGGTTTATGCTATCAGAAGCAGGAAGCTCTaGTGTTTCAGTCTGTTCGACGGAATGTTTATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VAWVYAIRSRKL*CFSLFDGMFMQ Trigger: CTGCATAAACATTCCGTCGAACAGACTGAAACAGCAGAGCTTCCTGCTTCTGATAGCATAAACCCAGGCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS GCA 72 bp | CCAAATGGCAATTGTTCCAGAAGTCAAGATTGCTGCTaGACAGTGATCTTTCACGTCACCTTCCAGGAACCT | + |
|
Preference number: 6 (lower is better) Translates to: PNGNCSRSQDCC*TVIFHVTFQEP Trigger: AGGTTCCTGGAAGGTGACGTGAAAGATCACTGTGCAGCAGCAATCTTGACTTCTGGAACAATTGCCATTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS GCA 72 bp | GTCCCAAATGGCAATTGTTCCAGAAGTCAAGATTGCTaGTGCACAGTGATCTTTCACGTCACCTTCCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VPNGNCSRSQDC*CTVIFHVTFQE Trigger: TTCCTGGAAGGTGACGTGAAAGATCACTGTGCAGCAGCAATCTTGACTTCTGGAACAATTGCCATTTGGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000261584.9 ENST00000566069.5 ENST00000568219.5 |
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| CDS GCA 72 bp | CCAAATGGCAATTGTTCCAGAAGTCAAGATTGCTGCTaGACAGTGATCTTTCACGTCACCTTCCAGGAACCA | + |
|
Preference number: 6 (lower is better) Translates to: PNGNCSRSQDCC*TVIFHVTFQEP Trigger: TGGTTCCTGGAAGGTGACGTGAAAGATCACTGTGCAGCAGCAATCTTGACTTCTGGAACAATTGCCATTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| CDS CCA 72 bp | TTCTGCTTTTGCTCACCACTAGGGTCACTGACCCTGTaGGGAAAATGTTCTTGGGTGTCATCTGTTCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: FCFCSPLGSLTL*GKCSWVSSVLC Trigger: ACAAAGAACAGATGACACCCAAGAACATTTTCCCCACAGGGTCAGTGACCCTAGTGGTGAGCAAAAGCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000261584.9 ENST00000567003.1 ENST00000568219.5 |
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| CDS CAA 72 bp | CCCGTCTTTGTATGCTGGCTTTGCGAGTTTGGCCTTTaGGGATGTGATTTTCCTGGTAGAACAATAAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PVFVCWLCEFGL*GCDFPGRTIRS Trigger: GGACCTTATTGTTCTACCAGGAAAATCACATCCCAAAAGGCCAAACTCGCAAAGCCAGCATACAAAGACGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS TCA 72 bp | GCAATTGTTCCAGAAGTCAAGATTGCTGCTGCACAGTaGTCTTTCACGTCACCTTCCAGGAACCATTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AIVPEVKIAAAQ*SFTSPSRNHFR Trigger: TCTGAAATGGTTCCTGGAAGGTGACGTGAAAGATCACTGTGCAGCAGCAATCTTGACTTCTGGAACAATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| CDS CAA 72 bp | GTAAGTCCCAAATGGCAATTGTTCCAGAAGTCAAGATaGCTGCTGCACAGTGATCTTTCACGTCACCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VSPKWQLFQKSR*LLHSDLSRHLP Trigger: TGGAAGGTGACGTGAAAGATCACTGTGCAGCAGCAATCTTGACTTCTGGAACAATTGCCATTTGGGACTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000261584.9 ENST00000566069.5 ENST00000568219.5 |
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| CDS CAA 90 bp | GTATTCTCACACTATGTTCTCTGTTTCTCCCCATCATCCAGATCCTaGAAGGTAGCAGGAACTGCCATCCTCAGTCACTCAACAAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: VFSHYVLCFSPSSRS*KVAGTAILSHSTNE Trigger: TTCATTTGTTGAGTGACTGAGGATGGCAGTTCCTGCTACCTTCAAGGATCTGGATGATGGGGAGAAACAGAGAACATAGTGTGAGAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567003.1 |
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| CDS CCA 72 bp | ATAATAGTAGTACCAAGCAGAGCTTCTTGCATCCCTTaGACCTCAGCAAAAGTTAGTATAGTCTCCTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: IIVVPSRASCIP*TSAKVSIVSSG Trigger: CCCTGAGGAGACTATACTAACTTTTGCTGAGGTCCAAGGGATGCAAGAAGCTCTGCTTGGTACTACTATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS CAA 90 bp | GAACAGGAACCTGAAGGATTCTTTAACTCTGAAACCAATTGTAGGTaGCCTGGGTTTATGCTATCAGAAGCAGGAAGCTCTGCTGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: EQEPEGFFNSETNCR*PGFMLSEAGSSAVS Trigger: TGAAACAGCAGAGCTTCCTGCTTCTGATAGCATAAACCCAGGCAACCTACAATTGGTTTCAGAGTTAAAGAATCCTTCAGGTTCCTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000261584.9 ENST00000565038.1 ENST00000568219.5 |
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| CDS TCA 72 bp | GACAGTAGTTGCTTTAAACTCAGCATTCCATCCCTATaGAATGGAGCCGTGAAAGCATCATCATCCAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: DSSCFKLSIPSL*NGAVKASSSKD Trigger: ATCCTTGGATGATGATGCTTTCACGGCTCCATTTCATAGGGATGGAATGCTGAGTTTAAAGCAACTACTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS GCA 72 bp | ATTGGACATGCTTCGTGTTGTTCTAACATAATATTCTaGAGGAAACAGAAGGCCTTCAGGCACTGTGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: IGHASCCSNIIF*RKQKAFRHCAR Trigger: TCTTGCACAGTGCCTGAAGGCCTTCTGTTTCCTGCAGAATATTATGTTAGAACAACACGAAGCATGTCCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS TCA 72 bp | GGTTCTGAGTGTTTTAGCTGCGGTGAGAGATCCTGCTaGGACAAACAATCTTGTTCTTCTACTGTTTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: GSECFSCGERSC*DKQSCSSTVFL Trigger: TAAGAAAACAGTAGAAGAACAAGATTGTTTGTCTCAGCAGGATCTCTCACCGCAGCTAAAACACTCAGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000261584.9 ENST00000561514.1 ENST00000567003.1 ENST00000568219.5 |
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| CDS TCA 72 bp | CAGTCTGAGTGTTTTAGCTGCGGTGAGAGATCCTGCTaGGACAAACAATCTTGTTCTTCTACTGTTTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: QSECFSCGERSC*DKQSCSSTVFL Trigger: TAAGAAAACAGTAGAAGAACAAGATTGTTTGTCTCAGCAGGATCTCTCACCGCAGCTAAAACACTCAGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565038.1 |
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| CDS TCA 72 bp | TGTTTATGCAGCTCCTGGCATGTGTTTCTACAGAGCTaGTTTTCTTTAAAAGTGAATGACTCAATGGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: CLCSSWHVFLQS*FSLKVNDSMGG Trigger: TCCACCCATTGAGTCATTCACTTTTAAAGAAAATCAGCTCTGTAGAAACACATGCCAGGAGCTGCATAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS TCA 72 bp | GAGAAGCCCCATTTCAGAATAGGCTTTGTGACAGACTaGAGCTTGGTAAGAATCATCAATGTGCATCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: EKPHFRIGFVTD*SLVRIINVHLF Trigger: AAAAAGATGCACATTGATGATTCTTACCAAGCTTCAGTCTGTCACAAAGCCTATTCTGAAATGGGGCTTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS CAA 90 bp | TATTTAAAGGAGTATAAAGTAATATGGATGAAGAAAGGCCCGTCTTaGTATGCTGGCTTTGCGAGTTTGGCCTTTTGGGATGTGATTTTC | + |
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Preference number: 6 (lower is better) Translates to: YLKEYKVIWMKKGPS*YAGFASLAFWDVIF Trigger: GAAAATCACATCCCAAAAGGCCAAACTCGCAAAGCCAGCATACAAAGACGGGCCTTTCTTCATCCATATTACTTTATACTCCTTTAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS TCA 72 bp | TTAAACTCAGCATTCCATCCCTATGAAATGGAGCCGTaGAAGCATCATCATCCAAGGATAAATAAGCACTAT | + |
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Preference number: 6 (lower is better) Translates to: LNSAFHPYEMEP*KHHHPRINKHY Trigger: ATAGTGCTTATTTATCCTTGGATGATGATGCTTTCACGGCTCCATTTCATAGGGATGGAATGCTGAGTTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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| CDS TCA 72 bp | TCCAGGAACCATTTCAGAATAGGCTTTGTGACAGACTaGAGCTTGGTAAGAATCATCAATGTGCATCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: SRNHFRIGFVTD*SLVRIINVHLF Trigger: AAAAAGATGCACATTGATGATTCTTACCAAGCTTCAGTCTGTCACAAAGCCTATTCTGAAATGGTTCCTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566069.5 |
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| CDS GCA 72 bp | GATAAACATGTCCTGACAGGAAAGCTAAACGGAACCTaGAGAACCATTCAGATCATACCATTTATGAACATT | + |
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Preference number: 6 (lower is better) Translates to: DKHVLTGKLNGT*RTIQIIPFMNI Trigger: AATGTTCATAAATGGTATGATCTGAATGGTTCTGCAGGTTCCGTTTAGCTTTCCTGTCAGGACATGTTTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561514.1 |
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| CDS CCA 72 bp | GAAATATTTGCCTCTAAATTAGAACTTGTGGGCAGTTaGCCACTTTTACTTATAGCTTTATTTACAAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: EIFASKLELVGS*PLLLIALFTRR Trigger: CCTCCTTGTAAATAAAGCTATAAGTAAAAGTGGCCAACTGCCCACAAGTTCTAATTTAGAGGCAAATATTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261584.9 ENST00000568219.5 |
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