RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PAK6 (Homo sapiens)

Ensembl gene IDs: ENSG00000137843

Ensembl transcript IDs: ENST00000260404.8, ENST00000441369.6, ENST00000453867.7, ENST00000455577.6, ENST00000542403.3, ENST00000557808.1, ENST00000557926.1, ENST00000558055.5, ENST00000558106.5, ENST00000558183.6, ENST00000558658.6, ENST00000558878.6, ENST00000559139.5, ENST00000559617.5, ENST00000559901.1, ENST00000560346.5, ENST00000560669.5, ENST00000560684.6, ENST00000560806.6, ENST00000561230.5

Found 970 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGAGCAGGCCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTaGGACTGCACCTTCAGGACATCAGACGTGAGGGAGGAAGCGGGA +
Preference number: 1 (lower is better)
Translates to: WSRPFTVLGGEGLYR*DCTFRTSDVREEAG
Trigger: TCCCGCTTCCTCCCTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCCTGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR TCA 90 bp GAGGGTGGGGCTGGGGCTTCACATTTCAATCTTTGGAGAGAATACTaGGAGGAGGAGGCAGGCAAGTCCTGCCGGCAGGCTGGCTGCCCA +
Preference number: 1 (lower is better)
Translates to: EGGAGASHFNLWREY*EEEAGKSCRQAGCP
Trigger: TGGGCAGCCAGCCTGCCGGCAGGACTTGCCTGCCTCCTCCTCTCAGTATTCTCTCCAAAGATTGAAATGTGAAGCCCCAGCCCCACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
3UTR CCA 90 bp GAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGGGTaGGGCTGGGGCTTCACATTTCAATCTTTGGAGAGAATACTGAGA +
Preference number: 1 (lower is better)
Translates to: EGAGPAWPSRLKGRG*GWGFTFQSLERILR
Trigger: TCTCAGTATTCTCTCCAAAGATTGAAATGTGAAGCCCCAGCCCCACCCTCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
3UTR TCA 90 bp AACTTAGTGGGAGAGAGGGGCAGCCTTCCTGAAACTGGCTGTGGGTaGCCTGGAGGGACCTGGGCTGTCAAGGTGGCTTTCCTCCCCTTA +
Preference number: 1 (lower is better)
Translates to: NLVGERGSLPETGCG*PGGTWAVKVAFLPL
Trigger: TAAGGGGAGGAAAGCCACCTTGACAGCCCAGGTCCCTCCAGGTCACCCACAGCCAGTTTCAGGAAGGCTGCCCCTCTCTCCCACTAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR CCA 90 bp AGACGTGAGGGAGGAAGCGGGATTCCGGTCATAAAAACCACCCCGTaGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGC +
Preference number: 1 (lower is better)
Translates to: RREGGSGIPVIKTTP*PSRDSRFEAGAENS
Trigger: GCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGGGGTGGTTTTTATGACCGGAATCCCGCTTCCTCCCTCACGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR TCA 90 bp TCTGGCCCTCACGATGCACAGTACAGGAGAAGCTCAGAAGCCTCCTaGGCTCCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGC +
Preference number: 1 (lower is better)
Translates to: SGPHDAQYRRSSEAS*APRSVRLSMDHSTG
Trigger: GCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGGAGCTCAGGAGGCTTCTGAGCTTCTCCTGTACTGTGCATCGTGAGGGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR CCA 90 bp CGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATCTGTaGAGACCAGCAGTCTGCCCTCTGCAGTGGCCTAGGACACTAGTG +
Preference number: 1 (lower is better)
Translates to: RDSRFEAGAENSRYL*RPAVCPLQWPRTLV
Trigger: CACTAGTGTCCTAGGCCACTGCAGAGGGCAGACTGCTGGTCTCCACAGATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR TCA 90 bp GCTGGGGCAGATGGTTTGCACACATGGATGCCTGTGACCTTGACATaGTGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTT +
Preference number: 1 (lower is better)
Translates to: AGADGLHTWMPVTLT*WKPGGGSPSLPDRV
Trigger: AACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATCCATGTGTGCAAACCATCTGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
3UTR CCA 90 bp CACAGCAGCCTTTTCTACTGTGTTGGCTGCAGAGGCCAGGAACGCTaGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGG +
Preference number: 1 (lower is better)
Translates to: HSSLFYCVGCRGQER*PLRFLEISLCKYQG
Trigger: CCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCCAACACAGTAGAAAAGGCTGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR TCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTCTaGAGAGAACAATGGGTCCCTGATGACCTGGTTATTGAGATAAAC +
Preference number: 1 (lower is better)
Translates to: DGNPEVVRLLSQIGF*REQWVPDDLVIEIN
Trigger: GTTTATCTCAATAACCAGGTCATCAGGGACCCATTGTTCTCTTCAGAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR GCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGATGCCGGCAGGCTGGCTaGCCAGTGTGCCCTGCCTGT +
Preference number: 2 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRCRQAG*PVCPAC
Trigger: ACAGGCAGGGCACACTGGGCAGCCAGCCTGCCGGCA...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
3UTR-3UTR GCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGAGGCAGGCAAGTCCTaGCGGCAGGCTGGCTGCCCA +
Preference number: 2 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGREAGKS*RQAGCP
Trigger: TGGGCAGCCAGCCTGCCGGCAGGACTTGCCTGCCTC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGAGGGGCAGGTCCGGCCTaGCCCAGTAGGCTGAAGGGC +
Preference number: 2 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRGAGPA*PSRLKG
Trigger: GCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCC...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGGGGCAGGTCCGGCCTaGCCCAGTAGGCTGAAGGGC +
Preference number: 2 (lower is better)
Translates to: GCRGQERWPLRFLEISLCGAGPA*PSRLKG
Trigger: GCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR GCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGCTGGCTGCCCAGTGTaGCCTGCCTGTGGGCGTAGG +
Preference number: 2 (lower is better)
Translates to: GCRGQERWPLRFLEISLCAGCPV*PACGRR
Trigger: CCTACGCCCACAGGCAGGGCACACTGGGCAGCCAGC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCGTCCTGCCGGCAGGCTaGCTGCCCAGTGTGCCCTGC +
Preference number: 2 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPAVLPAG*LPSVPC
Trigger: GCAGGGCACACTGGGCAGCCAGCCTGCCGGCAGGAC...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCGGGGCAGGTCCGGCCTaGCCCAGTAGGCTGAAGGGC +
Preference number: 2 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPGAGPA*PSRLKG
Trigger: GCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCC...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGGCCTGTGGGCGTAGGTaGCAGGCATACTTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: VEARPRKQVPSGQNLVGEACGRR*QAYLGW
Trigger: CCACCCCAAGTATGCCTGCCACCTACGCCCACAGGC...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGAGAGGGGCTGTACAGGTaGGACTGCACCTTCAGGACA +
Preference number: 2 (lower is better)
Translates to: PLHWPGRHRSGEVEARPREGLYR*DCTFRT
Trigger: TGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTC...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR GCA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCTTCTACTGTGTTGGCTaGAGAGGCCAGGAACGCTGG +
Preference number: 2 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGFYCVG*RGQERW
Trigger: CCAGCGTTCCTGGCCTCTGCAGCCAACACAGTAGAA...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCCCTGGGCTGTCAAGGTaGCTTTCCTCCCCTTACACA +
Preference number: 2 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGPGLSR*LSSPYT
Trigger: TGTGTAAGGGGAGGAAAGCCACCTTGACAGCCCAGG...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGGGGCAGGTCCGGCCTaGCCCAGTAGGCTGAAGGGC +
Preference number: 2 (lower is better)
Translates to: RGQERWPLRFLEISLCKYGAGPA*PSRLKG
Trigger: GCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCC...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCGGGGCAGGTCCGGCCTaGCCCAGTAGGCTGAAGGGC +
Preference number: 2 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVGAGPA*PSRLKG
Trigger: GCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCC...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATGTCTGCCCTCTGCAGTaGCCTAGGACACTAGTGGAC +
Preference number: 2 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYVCPLQ*PRTLVD
Trigger: GTCCACTAGTGTCCTAGGCCACTGCAGAGGGCAGAC...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR GCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGCTGGCTGCCCAGTGTaGCCTGCCTGTGGGCGTAGG +
Preference number: 2 (lower is better)
Translates to: RGQERWPLRFLEISLCKYAGCPV*PACGRR
Trigger: CCTACGCCCACAGGCAGGGCACACTGGGCAGCCAGC...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
3UTR-3UTR GCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCGAGGCAGGCAAGTCCTaGCGGCAGGCTGGCTGCCCA +
Preference number: 2 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVEAGKS*RQAGCP
Trigger: TGGGCAGCCAGCCTGCCGGCAGGACTTGCCTGCCTC...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
3UTR-3UTR GCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGAGGCAGGCAAGTCCTaGCGGCAGGCTGGCTGCCCA +
Preference number: 2 (lower is better)
Translates to: PGTLASAFLRNIPVQISREAGKS*RQAGCP
Trigger: TGGGCAGCCAGCCTGCCGGCAGGACTTGCCTGCCTC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATGGCAGAGGGTGGGGCTaGGGCTTCACATTTCAATCT +
Preference number: 2 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYGRGWG*GFTFQS
Trigger: AGATTGAAATGTGAAGCCCCAGCCCCACCCTCTGCC...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCGGCCATTCACAGTTCTaGGCGGGGAGGGGCTGTACA +
Preference number: 2 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPAGHSQF*AGRGCT
Trigger: TGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCC...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGAGGCCAGGAACGCTaGCCTCTGCGTTTCTTAGAA +
Preference number: 2 (lower is better)
Translates to: VEARPRKQVPSGQNLVGERGQER*PLRFLE
Trigger: TTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGAATAAAAACCACCCCGTaGCCCTCTCGAGACTCGAGG +
Preference number: 2 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGIKTTP*PSRDSR
Trigger: CCTCGAGTCTCGAGAGGGCCACGGGGTGGTTTTTAT...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR GCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGCTGGCTGCCCAGTGTaGCCTGCCTGTGGGCGTAGG +
Preference number: 2 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSAGCPV*PACGRR
Trigger: CCTACGCCCACAGGCAGGGCACACTGGGCAGCCAGC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCGCCTGTGGGCGTAGGTaGCAGGCATACTTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVACGRR*QAYLGW
Trigger: CCACCCCAAGTATGCCTGCCACCTACGCCCACAGGC...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGCCTGTGGGCGTAGGTaGCAGGCATACTTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: PGTLASAFLRNIPVQISRACGRR*QAYLGW
Trigger: CCACCCCAAGTATGCCTGCCACCTACGCCCACAGGC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
3UTR-3UTR GCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCCTGTACAGGTGGGACTaGACCTTCAGGACATCAGAC +
Preference number: 2 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPLYRWD*TFRTSD
Trigger: GTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAG...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCAGAGGCCAGGAACGCTaGCCTCTGCGTTTCTTAGAA +
Preference number: 2 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPRGQER*PLRFLE
Trigger: TTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCTTTTCTACTGTGTTaGCTGCAGAGGCCAGGAACG +
Preference number: 2 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPAPFLLC*LQRPGT
Trigger: CGTTCCTGGCCTCTGCAGCCAACACAGTAGAAAAGG...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCATAAAAACCACCCCGTaGCCCTCTCGAGACTCGAGG +
Preference number: 2 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCIKTTP*PSRDSR
Trigger: CCTCGAGTCTCGAGAGGGCCACGGGGTGGTTTTTAT...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR GCA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTGCTGGCTGCCCAGTGTaGCCTGCCTGTGGGCGTAGG +
Preference number: 2 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVAGCPV*PACGRR
Trigger: CCTACGCCCACAGGCAGGGCACACTGGGCAGCCAGC...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR GCA 90 bp CAGGCCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTTTAGAAATATCCCTGTaGAAATATCAAGGGGTCATC +
Preference number: 2 (lower is better)
Translates to: QAIHSSGRGGAVQVGLHLLEISL*KYQGVI
Trigger: GATGACCCCTTGATATTTGCACAGGGATATTTCTAA...AAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGCCTGTGGGCGTAGGTaGCAGGCATACTTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSACGRR*QAYLGW
Trigger: CCACCCCAAGTATGCCTGCCACCTACGCCCACAGGC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAGGCAGAGGGTGGGGCTaGGGCTTCACATTTCAATCT +
Preference number: 2 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIGRGWG*GFTFQS
Trigger: AGATTGAAATGTGAAGCCCCAGCCCCACCCTCTGCC...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGGCAGAGGGTGGGGCTaGGGCTTCACATTTCAATCT +
Preference number: 2 (lower is better)
Translates to: RGQERWPLRFLEISLCKYGRGWG*GFTFQS
Trigger: AGATTGAAATGTGAAGCCCCAGCCCCACCCTCTGCC...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGGCAGAGGGTGGGGCTaGGGCTTCACATTTCAATCT +
Preference number: 2 (lower is better)
Translates to: NIPVQISRGHPVERGLHLGRGWG*GFTFQS
Trigger: AGATTGAAATGTGAAGCCCCAGCCCCACCCTCTGCC...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTGTCTGCCCTCTGCAGTaGCCTAGGACACTAGTGGAC +
Preference number: 2 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVVCPLQ*PRTLVD
Trigger: GTCCACTAGTGTCCTAGGCCACTGCAGAGGGCAGAC...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTCCTGGGCTGTCAAGGTaGCTTTCCTCCCCTTACACA +
Preference number: 2 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVPGLSR*LSSPYT
Trigger: TGTGTAAGGGGAGGAAAGCCACCTTGACAGCCCAGG...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR GCA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTCTGTACAGGTGGGACTaGACCTTCAGGACATCAGAC +
Preference number: 2 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVLYRWD*TFRTSD
Trigger: GTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAG...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CCA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTTTACATTCCTGTCTCTaGCCCTCACGATGCACAGTA +
Preference number: 2 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVLHSCL*PSRCTV
Trigger: TACTGTGCATCGTGAGGGCCAGAGACAGGAATGTAA...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR GCA 72 bp GAGGAGGAGGCAGGCAAGTCCTGCCGGCAGGCTGGCTaGCCAGTGTGCCCTGCCTGTGGGCGTAGGTGGCAG +
Preference number: 3 (lower is better)
Translates to: EEEAGKSCRQAG*PVCPACGRRWQ
Trigger: CTGCCACCTACGCCCACAGGCAGGGCACACTGGGCAGCCAGCCTGCCGGCAGGACTTGCCTGCCTCCTCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
3UTR CCA 72 bp CCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTaGGACTGCACCTTCAGGACATCAGACGTGAGGGAG +
Preference number: 3 (lower is better)
Translates to: PFTVLGGEGLYR*DCTFRTSDVRE
Trigger: CTCCCTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR CCA 72 bp GGAGGAAGCGGGATTCCGGTCATAAAAACCACCCCGTaGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCT +
Preference number: 3 (lower is better)
Translates to: GGSGIPVIKTTP*PSRDSRFEAGA
Trigger: AGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGGGGTGGTTTTTATGACCGGAATCCCGCTTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CAA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCGCCTTTTCTACTGTGTaGGCTGCAGAGGCCAGGAAC +
Preference number: 3 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPAFSTV*AAEARN
Trigger: GTTCCTGGCCTCTGCAGCCAACACAGTAGAAAAGGC...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR TCA 72 bp TGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTaGGGGAGGAAGCGGGATTCCGGTCATAAAAACCAC +
Preference number: 3 (lower is better)
Translates to: CTGGTAPSGHQT*GRKRDSGHKNH
Trigger: GTGGTTTTTATGACCGGAATCCCGCTTCCTCCCTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR TCA 72 bp GATGGTTTGCACACATGGATGCCTGTGACCTTGACATaGTGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCA +
Preference number: 3 (lower is better)
Translates to: DGLHTWMPVTLT*WKPGGGSPSLP
Trigger: TGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATCCATGTGTGCAAACCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
3UTR GCA 72 bp TGCCAATCCTTACATTCCTGTCTCTGGCCCTCACGATaGACAGTACAGGAGAAGCTCAGAAGCCTCCTGAGC +
Preference number: 3 (lower is better)
Translates to: CQSLHSCLWPSR*TVQEKLRSLLS
Trigger: GCTCAGGAGGCTTCTGAGCTTCTCCTGTACTGTGCATCGTGAGGGCCAGAGACAGGAATGTAAGGATTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR TCA 72 bp CCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTCTaGAGAGAACAATGGGTCCCTGATGACCTGGTTATT +
Preference number: 3 (lower is better)
Translates to: PEVVRLLSQIGF*REQWVPDDLVI
Trigger: AATAACCAGGTCATCAGGGACCCATTGTTCTCTTCAGAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CAA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGATTCACATTTCAATCTTaGGAGAGAATACTGAGAGGA +
Preference number: 3 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRFTFQS*ERILRG
Trigger: TCCTCTCAGTATTCTCTCCAAAGATTGAAATGTGAA...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR CCA 72 bp CTTTTCTACTGTGTTGGCTGCAGAGGCCAGGAACGCTaGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAA +
Preference number: 3 (lower is better)
Translates to: LFYCVGCRGQER*PLRFLEISLCK
Trigger: TTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCCAACACAGTAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CAA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCTTCACATTTCAATCTTaGGAGAGAATACTGAGAGGA +
Preference number: 3 (lower is better)
Translates to: GCRGQERWPLRFLEISLCFTFQS*ERILRG
Trigger: TCCTCTCAGTATTCTCTCCAAAGATTGAAATGTGAA...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CAA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGATTCACATTTCAATCTTaGGAGAGAATACTGAGAGGA +
Preference number: 3 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGFTFQS*ERILRG
Trigger: TCCTCTCAGTATTCTCTCCAAAGATTGAAATGTGAA...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CAA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTTCTTTCACTCAGAAATaGTCCCCTCACTCCCTGCCC +
Preference number: 3 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVSFTQK*SPHSLP
Trigger: GGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGA...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
3UTR-3UTR CAA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATTCACATTTCAATCTTaGGAGAGAATACTGAGAGGA +
Preference number: 3 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIFTFQS*ERILRG
Trigger: TCCTCTCAGTATTCTCTCCAAAGATTGAAATGTGAA...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
3UTR-3UTR CAA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTTTCACATTTCAATCTTaGGAGAGAATACTGAGAGGA +
Preference number: 3 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSFTFQS*ERILRG
Trigger: TCCTCTCAGTATTCTCTCCAAAGATTGAAATGTGAA...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGCCGGCTGGTGGGGCTaGGGCCACGCAGGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRAGWWG*GHAGCW
Trigger: CCAACACCCTGCGTGGCCGCAGCCCCACCAGCCGGC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGCTCGAGGCGGGCGGTaGCTCAGTGCTAGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRARGGR*LSASGP
Trigger: CGGCCCACTAGCACTGAGTCACCGCCCGCCTCGAGC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS-3UTR TCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGATGCCCCCGTTGCAGCTaGGGTAGAGGCCGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRCPRCS*GRGRGG
Trigger: ACCCCCACGGCCTCTACCTCAGCTGCAACGGGGGCA...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGGCCGTGGGGGTCAGTaGGCTCAGACTGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRGRGGQ*AQTGGS
Trigger: AGAGCCCCCAGTCTGAGCGCACTGACCCCCACGGCC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGACCTGGGACCTTGCTaGGCCAGTCCTCCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRDLGPC*ASPPQA
Trigger: GGCCTGCGGAGGACTGGCCCAGCAAGGTCCCAGGTC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGACCCGTGGGCTCTGTaGCTCGGGCCACGGCATCTG +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRDPWAL*LGPRHL
Trigger: CAGATGCCGTGGCCCGAGCCACAGAGCCCACGGGTC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCCGCTGCGAGGCACCCTaGAACTCGGCGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGRCEAP*NSAGPR
Trigger: CCTGGGCCCCGCCGAGTTTCAGGGTGCCTCGCAGCG...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGACCTGCAGGAACTCCATaGGCACCCACAGCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRPAGTP*APTAPR
Trigger: GCGAGGAGCTGTGGGTGCTCATGGAGTTCCTGCAGG...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGATCGGGCCACGGCATCTaGTTGTGGCCTGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRSGHGI*LWPAGV
Trigger: CACACCAGCAGGCCACAAGCAGATGCCGTGGCCCGA...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGGACCCGTGGGCTCTGTaGCTCGGGCCACGGCATCTG +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRREDPWAL*LGPRHL
Trigger: CAGATGCCGTGGCCCGAGCCACAGAGCCCACGGGTC...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAATCTTGACGGCCACCTaGCGGCCCGAGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRILTAT*RPECFS
Trigger: GGAGAAGCACTCGGGCCGCCAGGTGGCCGTCAAGAT...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGGTGGCAGGCATACTTaGGGTGGGCTCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRGGRHT*GGLSRW
Trigger: CCACCTGCTGAGCCCACCCCAAGTATGCCTGCCACC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp CAGGCCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTTGCCCCCGTTGCAGCTaGGGTAGAGGCCGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: QAIHSSGRGGAVQVGLHLCPRCS*GRGRGG
Trigger: ACCCCCACGGCCTCTACCTCAGCTGCAACGGGGGCA...AAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGGCCGGCTGGTGGGGCTaGGGCCACGCAGGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGAGWWG*GHAGCW
Trigger: CCAACACCCTGCGTGGCCGCAGCCCCACCAGCCGGC...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR GCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGACATCTGCTTGTGGCCTaGTGGTGTGCCCCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRHLLVA*WCAPVA
Trigger: TGCAACGGGGGCACACCAGCAGGCCACAAGCAGATG...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGAGGCAGGCACCCAGCTaGAGACAGCGCTGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRRERQAPS*RQRCEA
Trigger: TGCCTCGCAGCGCTGTCTGCAGCTGGGTGCCTGCCT...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGACTGTGGCCGGGGCTGTaGGGAGGGACTTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRLWPGL*GGTSGG
Trigger: GCCCCCAGAAGTCCCTCCGCACAGCCCCGGCCACAG...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAAGCAGCTCCCTGCGCTaGTGCTTCCTGAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRSSSLR*CFLRSI
Trigger: GATGGACCTCAGGAAGCAGCAGCGCAGGGAGCTGCT...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGAGCGCCCTCCCCCACCTaGCTGGACCGTGGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRAPSPT*LDRGCL
Trigger: GAGACAGCCACGGTCCAGGCAGGTGGGGGAGGGCGC...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS-3UTR CCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGCGTGGCTGCTCCTTCTaGGCAGCGGGGTCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRRERGCSF*AAGSCV
Trigger: AACGCAGGACCCCGCTGCCCAGAAGGAGCAGCCACG...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAGGCCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTGTCCTCCGCAGGCCGTaGCTGCTCCTTCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QAIHSSGRGGAVQVGLHLVLRRP*LLLLGS
Trigger: GCTGCCCAGAAGGAGCAGCCACGGCCTGCGGAGGAC...AAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGCACCACTGTCTTCATaGGCTGGAGCTGCACCCGTG +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRAPLSS*AGAAPV
Trigger: CACGGGTGCAGCTCCAGCCCATGAAGACAGTGGTGC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAACATGTCTGGGTCGGTaGCCCAGTGCTCATCCCCCA +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRTCLGR*PSAHPP
Trigger: TGGGGGATGAGCACTGGGCCACCGACCCAGACATGT...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGTTGGGCTTGCTCTGTaGTGGAGGGCCTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRVGLAL*WRAWLA
Trigger: AGCAAGCCAGGCCCTCCACCACAGAGCAAGCCCAAC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGAGTCCTGCCGGCAGGCTaGCTGCCCAGTGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRVLPAG*LPSVPC
Trigger: GCAGGGCACACTGGGCAGCCAGCCTGCCGGCAGGAC...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCGTCCTGCCGGCAGGCTaGCTGCCCAGTGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGVLPAG*LPSVPC
Trigger: GCAGGGCACACTGGGCAGCCAGCCTGCCGGCAGGAC...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCGGGGCAGGTCCGGCCTaGCCCAGTAGGCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGGAGPA*PSRLKG
Trigger: GCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCC...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGATGGCTGTGGGTGACCTaGAGGGACCTGGGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRWLWVT*RDLGCQ
Trigger: TTGACAGCCCAGGTCCCTCCAGGTCACCCACAGCCA...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGCGCTGCGAGGCACCCTaGAACTCGGCGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VEARPRKQVPSGQNLVGERCEAP*NSAGPR
Trigger: CCTGGGCCCCGCCGAGTTTCAGGGTGCCTCGCAGCG...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCGCTGCGAGGCACCCTaGAACTCGGCGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPRCEAP*NSAGPR
Trigger: CCTGGGCCCCGCCGAGTTTCAGGGTGCCTCGCAGCG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR TCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGGGGAGACGATGTCTGTaGGGGCTCCTCCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRREGRRCL*GLLPAG
Trigger: TCCTGCAGGGAGGAGCCCTCACAGACATCGTCTCCC...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGGAGGGGCAGCCTTCCTaGAACTGGCTGTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRREEGQPS*NWLWVT
Trigger: GGTCACCCACAGCCAGTTTCAGGAAGGCTGCCCCTC...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGCCACAGGCATCGCGCTaGCCCGCACCACTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRREPQASR*PAPLSS
Trigger: TGAAGACAGTGGTGCGGGGCAGCGCGATGCCTGTGG...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGCCGGCTGGTGGGGCTaGGGCCACGCAGGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCAGWWG*GHAGCW
Trigger: CCAACACCCTGCGTGGCCGCAGCCCCACCAGCCGGC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGAGGCCGTGGGGGTCAGTaGGCTCAGACTGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRGRGGQ*AQTGGS
Trigger: AGAGCCCCCAGTCTGAGCGCACTGACCCCCACGGCC...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGTCGGGCCACGGCATCTaGTTGTGGCCTGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRRESGHGI*LWPAGV
Trigger: CACACCAGCAGGCCACAAGCAGATGCCGTGGCCCGA...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CAGGCCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTGTGGAGGGCCTGGCTTaGTGCTGCTTGGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QAIHSSGRGGAVQVGLHLVEGLA*CCLEGL
Trigger: CAGCCCCTCCAAGCAGCAGCAAGCCAGGCCCTCCAC...AAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAAAGAGGAGTTGGGCTTaGTCTGTGGTGGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRKRSWA*SVVEGL
Trigger: CAGGCCCTCCACCACAGAGCAAGCCCAACTCCTCTT...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGGGACTTCTGGGGGCTaGTGGTATCCGAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRGTSGG*WYPKWS
Trigger: TGACCACTTCGGATACCAGCAGCCCCCAGAAGTCCC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGATCAGACTGGGGGCTCTaGAGGTACATGTCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRSDWGL*RYMSGS
Trigger: CGACCCAGACATGTACCTCCAGAGCCCCCAGTCTGA...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAGGCCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTATTGGGCAGGACCCGTaGGCTCTGTGGCTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: QAIHSSGRGGAVQVGLHLIGQDP*ALWLGP
Trigger: TGGCCCGAGCCACAGAGCCCACGGGTCCTGCCCAAT...AAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGTTGCAGCCAGCCCATTaGGCAGGACCCGTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRRELQPAH*AGPVGS
Trigger: AGAGCCCACGGGTCCTGCCCAATGGGCTGGCTGCAA...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGATGGGGAAGACCGGCCTaGAAGCTGGCCTGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRWGRPA*KLACGR
Trigger: CCGGCCACAGGCCAGCTTCCAGGCCGGTCTTCCCCA...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGCACCCTTGGCAACCGTaGGGTCCTGGGGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRREHPWQP*GPGAGT
Trigger: TGTACCTGCCCCAGGACCCCACGGTTGCCAAGGGTG...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGACAGCCAGGGCACCCTTaGCAACCGTGGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRQPGHP*QPWGPG
Trigger: CCCAGGACCCCACGGTTGCCAAGGGTGCCCTGGCTG...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGGTGGGCTCAGCAGGTaGAGGTCTGCTTTCGGTAGA +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRGGLSR*RSAFGR
Trigger: TCTACCGAAAGCAGACCTCCACCTGCTGAGCCCACC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGGGTGGCAGGCATACTTaGGGTGGGCTCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRREGGRHT*GGLSRW
Trigger: CCACCTGCTGAGCCCACCCCAAGTATGCCTGCCACC...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGGCCTGTGGGCGTAGGTaGCAGGCATACTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRREACGRR*QAYLGW
Trigger: CCACCCCAAGTATGCCTGCCACCTACGCCCACAGGC...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGAGGGGCTGTACAGGTaGGACTGCACCTTCAGGACA +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGREGLYR*DCTFRT
Trigger: TGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGGCAGCTGGGGCAGATaGTTTGCACACATGGATGCC +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRGSWGR*FAHMDA
Trigger: GGCATCCATGTGTGCAAACCATCTGCCCCAGCTGCC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATGCTGTCTCCAGAGTGTaGCCGCCGAGCCCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYAVSRV*PPSPAP
Trigger: GGGCGCGGGGCTCGGCGGCCACACTCTGGAGACAGC...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS-3UTR TCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGACGCTGCGAGGCACCCTaGAACTCGGCGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGRCEAP*NSAGPR
Trigger: CCTGGGCCCCGCCGAGTTTCAGGGTGCCTCGCAGCG...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp CAGGCCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTAAGTGGTCAGAGGGCTaGAGGTCCCCACCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: QAIHSSGRGGAVQVGLHLKWSEG*RSPPAG
Trigger: ACCAGCCGGTGGGGACCTTCAGCCCTCTGACCACTT...AAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGCTCCTCATTCAGCCTaGCTTGGGAGACGATGTCTG +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRAPHSA*LGRRCL
Trigger: CAGACATCGTCTCCCAAGTCAGGCTGAATGAGGAGC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAAGCTCAGAAGCCTCCTaGGCTCCCAGGAGTGTTAGA +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRSSEAS*APRSVR
Trigger: TCTAACACTCCTGGGAGCTCAGGAGGCTTCTGAGCT...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGATCCTGCGTTCTCCACTaGAGGCTGGTGCTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRSCVLH*RLVLVS
Trigger: AGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGA...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGTCCGCAGGCCGTGGCTaGTCCTTCTGGGCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: VEARPRKQVPSGQNLVGESAGRG*SFWAAG
Trigger: CCCCGCTGCCCAGAAGGAGCAGCCACGGCCTGCGGA...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGGAGGCCCACAAACTTaGCTTCTTTGGGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRGGPQT*LLWGRR
Trigger: CCTTCGACCCCAAAGAAGGCAAGTTTGTGGGCCTCC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGGGCCGTGGGGGTCAGTaGGCTCAGACTGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGGRGGQ*AQTGGS
Trigger: AGAGCCCCCAGTCTGAGCGCACTGACCCCCACGGCC...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR GCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGCCTGGTGGGGAGCTCTaGAGGCAGGCACCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGPGGEL*RQAPSC
Trigger: GCAGCTGGGTGCCTGCCTGCAGAGCTCCCCACCAGG...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR GCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGAGTGGAGGGCCTGGCTTaGTGCTGCTTGGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRVEGLA*CCLEGL
Trigger: CAGCCCCTCCAAGCAGCAGCAAGCCAGGCCCTCCAC...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCTGTGGCCGGGGCTGTaGGGAGGGACTTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPLWPGL*GGTSGG
Trigger: GCCCCCAGAAGTCCCTCCGCACAGCCCCGGCCACAG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR GCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGACAGCTCGGACAAGACTaGCCTTCTGTCCCAACACCT +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRQLGQD*PSVPTP
Trigger: AGGTGTTGGGACAGAAGGGCAGTCTTGTCCGAGCTG...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGACTCAGGCCGTGTGTCTaGCGTCCCCTCTCCCTGACG +
Preference number: 4 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRLRPCV*RPLSLT
Trigger: CGTCAGGGAGAGGGGACGCCAGACACACGGCCTGAG...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260404.8
CDS-3UTR CCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGAGGAGAGGGAAGACCTaGGACCTTGCTGGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRRERRGKT*DLAGPV
Trigger: GACTGGCCCAGCAAGGTCCCAGGTCTTCCCTCTCCT...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGACTCCTCACCCGCACTaGGCCTCTCTCTTAGGCGCT +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRRETPHPH*ASLLGA
Trigger: AGCGCCTAAGAGAGAGGCCCAGTGCGGGTGAGGAGT...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGGCACCACTGTCTTCATaGGCTGGAGCTGCACCCGTG +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRREAPLSS*AGAAPV
Trigger: CACGGGTGCAGCTCCAGCCCATGAAGACAGTGGTGC...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAGGCCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTTTGCAGCCAGCCCATTaGGCAGGACCCGTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QAIHSSGRGGAVQVGLHLLQPAH*AGPVGS
Trigger: AGAGCCCACGGGTCCTGCCCAATGGGCTGGCTGCAA...AAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGACCTCAGAGCCATGCTTaGCAGCCTTCATTCCATGCC +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRPQSHA*QPSFHA
Trigger: GGCATGGAATGAAGGCTGCCAAGCATGGCTCTGAGG...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGTCGGAAAGAGGAGTTaGGCTTGCTCTGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRVGKRS*ACSVVE
Trigger: CTCCACCACAGAGCAAGCCCAACTCCTCTTTCCGAC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGAAAGGTCCCCACCGGCTaGTCCGAGGGCAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRKVPTG*SEGKDW
Trigger: CCAGTCCTTGCCCTCGGACCAGCCGGTGGGGACCTT...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGCAGCCAGGGCACCCTTaGCAACCGTGGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGQPGHP*QPWGPG
Trigger: CCCAGGACCCCACGGTTGCCAAGGGTGCCCTGGCTG...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGTCCTGCCGGCAGGCTaGCTGCCCAGTGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCVLPAG*LPSVPC
Trigger: GCAGGGCACACTGGGCAGCCAGCCTGCCGGCAGGAC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAATAAAAACCACCCCGTaGCCCTCTCGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRIKTTP*PSRDSR
Trigger: CCTCGAGTCTCGAGAGGGCCACGGGGTGGTTTTTAT...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCGGAGCTGCACCCGTGTaGTTCGCGAAGGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGGAAPV*FAKGPP
Trigger: TGGTGGACCCTTCGCGAATCACACGGGTGCAGCTCC...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCTGCCCCCGTTGCAGCTaGGGTAGAGGCCGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPCPRCS*GRGRGG
Trigger: ACCCCCACGGCCTCTACCTCAGCTGCAACGGGGGCA...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR TCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGACCTGCAGGAACTCCATaGGCACCCACAGCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRPAGTP*APTAPR
Trigger: GCGAGGAGCTGTGGGTGCTCATGGAGTTCCTGCAGG...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGGCCGTGGGGGTCAGTaGGCTCAGACTGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCGRGGQ*AQTGGS
Trigger: AGAGCCCCCAGTCTGAGCGCACTGACCCCCACGGCC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGAGGCAGGCACCCAGCTaGAGACAGCGCTGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGRQAPS*RQRCEA
Trigger: TGCCTCGCAGCGCTGTCTGCAGCTGGGTGCCTGCCT...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR GCA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATCCTGGTGGGGAGCTCTaGAGGCAGGCACCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYPGGEL*RQAPSC
Trigger: GCAGCTGGGTGCCTGCCTGCAGAGCTCCCCACCAGG...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCCCTGGTGGGGAGCTCTaGAGGCAGGCACCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCPGGEL*RQAPSC
Trigger: GCAGCTGGGTGCCTGCCTGCAGAGCTCCCCACCAGG...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGACAGTGGACAGGAACATaGTTCGGAATAGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRQWTGT*FGIACA
Trigger: AGCGCAGGCTATTCCGAAGCATGTTCCTGTCCACTG...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGACCTGGCGGCCCGAGTaGTTCTCCCGGGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: VEARPRKQVPSGQNLVGETWRPE*FSRAKQ
Trigger: CTGCTTGGCCCGGGAGAAGCACTCGGGCCGCCAGGT...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCACCTGGCGGCCCGAGTaGTTCTCCCGGGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPTWRPE*FSRAKQ
Trigger: CTGCTTGGCCCGGGAGAAGCACTCGGGCCGCCAGGT...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR GCA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATTGCCGGCAGGCTGGCTaGCCAGTGTGCCCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYCRQAG*PVCPAC
Trigger: ACAGGCAGGGCACACTGGGCAGCCAGCCTGCCGGCA...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGTCCTCCGCAGGCCGTaGCTGCTCCTTCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCVLRRP*LLLLGS
Trigger: GCTGCCCAGAAGGAGCAGCCACGGCCTGCGGAGGAC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGGTGTGGACACGGTGCTaGAAGTTCTGTGGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRREVWTRC*KFCGAE
Trigger: CTCAGCGCCACAGAACTTCCAGCACCGTGTCCACAC...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGGTCCACCACGGGCTTaGGGCGCCGCAGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPGPPRA*GAAVCP
Trigger: TGGACACACTGCGGCGCCCCAAGCCCGTGGTGGACC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGCACGGCATCTGCTTGTaGCCTGCTGGTGTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGHGICL*PAGVPP
Trigger: CGGGGGCACACCAGCAGGCCACAAGCAGATGCCGTG...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGACCCGTGGGCTCTGTaGCTCGGGCCACGGCATCTG +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCDPWAL*LGPRHL
Trigger: CAGATGCCGTGGCCCGAGCCACAGAGCCCACGGGTC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGACCCGTGGGCTCTGTaGCTCGGGCCACGGCATCTG +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPDPWAL*LGPRHL
Trigger: CAGATGCCGTGGCCCGAGCCACAGAGCCCACGGGTC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGCCTATTGGTGCCCGTaGGGGGCGAGGCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPAYWCP*GARLLV
Trigger: CACCAGGAGCCTCGCCCCCCACGGGCACCAATAGGC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGCCTATTGGTGCCCGTaGGGGGCGAGGCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCAYWCP*GARLLV
Trigger: CACCAGGAGCCTCGCCCCCCACGGGCACCAATAGGC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGAAGGTCCCCACCGGCTaGTCCGAGGGCAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGKVPTG*SEGKDW
Trigger: CCAGTCCTTGCCCTCGGACCAGCCGGTGGGGACCTT...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCTGGGGAAGACCGGCCTaGAAGCTGGCCTGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPWGRPA*KLACGR
Trigger: CCGGCCACAGGCCAGCTTCCAGGCCGGTCTTCCCCA...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGTTGCTGGTGCTGATCTaGGCGTGCCAGGTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGLLVLI*ACQVRG
Trigger: CCCCCGCACCTGGCACGCCCAGATCAGCACCAGCAA...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCGCAACCGTGGGGTCCTaGGGCAGGTACAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGATVGS*GRYRLL
Trigger: CAGCAACCTGTACCTGCCCCAGGACCCCACGGTTGC...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGAGCAACCGTGGGGTCCTaGGGCAGGTACAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRATVGS*GRYRLL
Trigger: CAGCAACCTGTACCTGCCCCAGGACCCCACGGTTGC...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATCAGCCAGGGCACCCTTaGCAACCGTGGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYQPGHP*QPWGPG
Trigger: CCCAGGACCCCACGGTTGCCAAGGGTGCCCTGGCTG...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGAGCCGGGGGTCACCCTaGTCCACCACCATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGSRGSP*STTILS
Trigger: GCTCAGGATGGTGGTGGACCAGGGTGACCCCCGGCT...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGTCACTGAAGTACGGTaGCTCCCCATCTACCATCTC +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRVTEVR*LPIYHL
Trigger: GAGATGGTAGATGGGGAGCCACCGTACTTCAGTGAC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGACTTCATGGCTTGCACTaGGGAGTCACTGAAGTACGG +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRLHGLH*GVTEVR
Trigger: CCGTACTTCAGTGACTCCCCAGTGCAAGCCATGAAG...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGGGTGGGCTCAGCAGGTaGAGGTCTGCTTTCGGTAGA +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRREGGLSR*RSAFGR
Trigger: TCTACCGAAAGCAGACCTCCACCTGCTGAGCCCACC...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCGCCTGTGGGCGTAGGTaGCAGGCATACTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGACGRR*QAYLGW
Trigger: CCACCCCAAGTATGCCTGCCACCTACGCCCACAGGC...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGAGGGGCAGGTCCGGCCTaGCCCAGTAGGCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGGAGPA*PSRLKG
Trigger: GCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCC...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAAGAGGCCAGGAACGCTaGCCTCTGCGTTTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRRGQER*PLRFLE
Trigger: TTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGGAGGGGCTGTACAGGTaGGACTGCACCTTCAGGACA +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRREEGLYR*DCTFRT
Trigger: TGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTC...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGACAGCAGCCCTGAAGTaGGGCAGGGCCGAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGTAALK*GRAEED
Trigger: GTCCTCCTCGGCCCTGCCCCACTTCAGGGCTGCTGT...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR TCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGGGGAGACGATGTCTGTaGGGGCTCCTCCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGGRRCL*GLLPAG
Trigger: TCCTGCAGGGAGGAGCCCTCACAGACATCGTCTCCC...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR TCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGAGCTCAGAAGCCTCCTaGGCTCCCAGGAGTGTTAGA +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRRESSEAS*APRSVR
Trigger: TCTAACACTCCTGGGAGCTCAGGAGGCTTCTGAGCT...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGCCTGTGACCTTGACATaGTGGAAACCCGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRREPVTLT*WKPGGG
Trigger: ACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGG...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATATCTCACAGCAGCCCTaGAGTGGGGCAGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYISQQP*SGAGPR
Trigger: CCTCGGCCCTGCCCCACTTCAGGGCTGCTGTGAGAT...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCATCTCACAGCAGCCCTaGAGTGGGGCAGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPISQQP*SGAGPR
Trigger: CCTCGGCCCTGCCCCACTTCAGGGCTGCTGTGAGAT...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR GCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCTGGGCAGCGGGGTCCTaGGTTCTCCACTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCWAAGS*VLHCRL
Trigger: CAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCA...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGTCGGGCCACGGCATCTaGTTGTGGCCTGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGSGHGI*LWPAGV
Trigger: CACACCAGCAGGCCACAAGCAGATGCCGTGGCCCGA...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR GCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGGCAGGCACCCAGCTaGAGACAGCGCTGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPRQAPS*RQRCEA
Trigger: TGCCTCGCAGCGCTGTCTGCAGCTGGGTGCCTGCCT...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGTGGAGGGCCTGGCTTaGTGCTGCTTGGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPVEGLA*CCLEGL
Trigger: CAGCCCCTCCAAGCAGCAGCAAGCCAGGCCCTCCAC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR GCA 90 bp CAGGCCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTGGGACTTCTGGGGGCTaGTGGTATCCGAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: QAIHSSGRGGAVQVGLHLGTSGG*WYPKWS
Trigger: TGACCACTTCGGATACCAGCAGCCCCCAGAAGTCCC...AAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCAGCAGCTCCCTGCGCTaGTGCTTCCTGAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGSSSLR*CFLRSI
Trigger: GATGGACCTCAGGAAGCAGCAGCGCAGGGAGCTGCT...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCGCCTCGCTCTCCAAATaGCACTCCGACCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGASLSK*HSDPRS
Trigger: GCTTCTGGGGTCGGAGTGGCATTTGGAGAGCGAGGC...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGTTCTCCACTGCAGGCTaGTGCTTGTCTCTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRREFSTAG*CLSLAQ
Trigger: CTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAA...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCCGTGGCTGCTCCTTCTaGGCAGCGGGGTCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCRGCSF*AAGSCV
Trigger: AACGCAGGACCCCGCTGCCCAGAAGGAGCAGCCACG...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAGGCCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTGTGTGGACACGGTGCTaGAAGTTCTGTGGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: QAIHSSGRGGAVQVGLHLVWTRC*KFCGAE
Trigger: CTCAGCGCCACAGAACTTCCAGCACCGTGTCCACAC...AAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGACAAACTTGCCTTCTTTaGGGTCGAAGGAGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRQTCLL*GRRRCG
Trigger: TCCACACCTCCTTCGACCCCAAAGAAGGCAAGTTTG...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAATGACTGACAACTTCTaGATGTCGTTGAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRMTDNF*MSLSSP
Trigger: GGGGCTGCTCAACGACATCCAGAAGTTGTCAGTCAT...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCACATGTCTGGGTCGGTaGCCCAGTGCTCATCCCCCA +
Preference number: 4 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGTCLGR*PSAHPP
Trigger: TGGGGGATGAGCACTGGGCCACCGACCCAGACATGT...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCACGGCATCTGCTTGTaGCCTGCTGGTGTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPHGICL*PAGVPP
Trigger: CGGGGGCACACCAGCAGGCCACAAGCAGATGCCGTG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATATTGGGCAGGACCCGTaGGCTCTGTGGCTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYIGQDP*ALWLGP
Trigger: TGGCCCGAGCCACAGAGCCCACGGGTCCTGCCCAAT...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCATTGGGCAGGACCCGTaGGCTCTGTGGCTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPIGQDP*ALWLGP
Trigger: TGGCCCGAGCCACAGAGCCCACGGGTCCTGCCCAAT...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGCCTCAGAGCCATGCTTaGCAGCCTTCATTCCATGCC +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRREPQSHA*QPSFHA
Trigger: GGCATGGAATGAAGGCTGCCAAGCATGGCTCTGAGG...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAGGCCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTGGGCTGTGGCAGCAGTaGACAGGAACATGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: QAIHSSGRGGAVQVGLHLGLWQQ*TGTCFG
Trigger: TCCGAAGCATGTTCCTGTCCACTGCTGCCACAGCCC...AAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCGTTGGGCTTGCTCTGTaGTGGAGGGCCTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGVGLAL*WRAWLA
Trigger: AGCAAGCCAGGCCCTCCACCACAGAGCAAGCCCAAC...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGATGGGGAAGACCGGCCTaGAAGCTGGCCTGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGWGRPA*KLACGR
Trigger: CCGGCCACAGGCCAGCTTCCAGGCCGGTCTTCCCCA...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGATCTTGACGGCCACCTaGCGGCCCGAGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGILTAT*RPECFS
Trigger: GGAGAAGCACTCGGGCCGCCAGGTGGCCGTCAAGAT...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGATCATTCAGCCTGACTTaGGAGACGATGTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRSFSLT*ETMSVR
Trigger: CCTCACAGACATCGTCTCCCAAGTCAGGCTGAATGA...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCCCCGGAGCCTCTTCATaGCTTGCACTGGGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGPGASS*LALGSH
Trigger: GTGACTCCCCAGTGCAAGCCATGAAGAGGCTCCGGG...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260404.8
ENST00000560346.5
CDS-3UTR CCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGATGGCTGTGGGTGACCTaGAGGGACCTGGGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRWLWVT*RDLGCQ
Trigger: TTGACAGCCCAGGTCCCTCCAGGTCACCCACAGCCA...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCACAGCAGCCCTGAAGTaGGGCAGGGCCGAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPTAALK*GRAEED
Trigger: GTCCTCCTCGGCCCTGCCCCACTTCAGGGCTGCTGT...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGCCGGCTTAGTCACCTaGATGGCTGCTGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPAGLVT*MAAGGS
Trigger: GGAGCCGCCAGCAGCCATCCAGGTGACTAAGCCGGC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS-3UTR TCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGCTCTCTCTTAGGCGCTaGGGAGAGGGAAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGLSLRR*GEGRPG
Trigger: CCCAGGTCTTCCCTCTCCTCAGCGCCTAAGAGAGAG...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR TCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGGAGCTGCACCCGTGTaGTTCGCGAAGGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPGAAPV*FAKGPP
Trigger: TGGTGGACCCTTCGCGAATCACACGGGTGCAGCTCC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR TCA 90 bp CAGGCCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTACTTCTGGATGTCGTTaGGCAGCCCCGAGATGTAGC +
Preference number: 4 (lower is better)
Translates to: QAIHSSGRGGAVQVGLHLTSGCR*AAPRCS
Trigger: GCTACATCTCGGGGCTGCTCAACGACATCCAGAAGT...AAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAAGTGGTCAGAGGGCTaGAGGTCCCCACCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPKWSEG*RSPPAG
Trigger: ACCAGCCGGTGGGGACCTTCAGCCCTCTGACCACTT...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR TCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAAGTGGTCAGAGGGCTaGAGGTCCCCACCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: VEARPRKQVPSGQNLVGEKWSEG*RSPPAG
Trigger: ACCAGCCGGTGGGGACCTTCAGCCCTCTGACCACTT...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCCCTGCAGGAACTCCATaGGCACCCACAGCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCPAGTP*APTAPR
Trigger: GCGAGGAGCTGTGGGTGCTCATGGAGTTCCTGCAGG...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCCTGCAGGAACTCCATaGGCACCCACAGCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPPAGTP*APTAPR
Trigger: GCGAGGAGCTGTGGGTGCTCATGGAGTTCCTGCAGG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR TCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGAAACTGGCTGTGGGTaGCCTGGAGGGACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCETGCG*PGGTWA
Trigger: AGCCCAGGTCCCTCCAGGTCACCCACAGCCAGTTTC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGATGGGCAGCGGGGTCCTaGGTTCTCCACTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGWAAGS*VLHCRL
Trigger: CAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCA...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCCCACAGGCATCGCGCTaGCCCGCACCACTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCPQASR*PAPLSS
Trigger: TGAAGACAGTGGTGCGGGGCAGCGCGATGCCTGTGG...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCCACAGGCATCGCGCTaGCCCGCACCACTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPPQASR*PAPLSS
Trigger: TGAAGACAGTGGTGCGGGGCAGCGCGATGCCTGTGG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR GCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCTCGGGCCACGGCATCTaGTTGTGGCCTGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCSGHGI*LWPAGV
Trigger: CACACCAGCAGGCCACAAGCAGATGCCGTGGCCCGA...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGGGGCCCAGGGACTGTaGCTTTGCAGCCAGCCCATT +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPGAQGL*LCSQPI
Trigger: AATGGGCTGGCTGCAAAGGCACAGTCCCTGGGCCCC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR GCA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCGCAGCCTTCATTCCATaGCTATTGGTGCCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGAAFIP*LLVPVG
Trigger: CCCCACGGGCACCAATAGGCATGGAATGAAGGCTGC...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCACCTGGCGGCCCGAGTaGTTCTCCCGGGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPATWRPE*FSRAKQ
Trigger: CTGCTTGGCCCGGGAGAAGCACTCGGGCCGCCAGGT...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGAGCAGCTCCCTGCGCTaGTGCTTCCTGAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGSSSLR*CFLRSI
Trigger: GATGGACCTCAGGAAGCAGCAGCGCAGGGAGCTGCT...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR GCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGCCGAGAGCTTCACCCTaGCATCGAGGGTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGPRASP*HRGSAG
Trigger: TCCTGCTGACCCTCGATGGCAGGGTGAAGCTCTCGG...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR GCA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCTGCCGGCAGGCTGGCTaGCCAGTGTGCCCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPACRQAG*PVCPAC
Trigger: ACAGGCAGGGCACACTGGGCAGCCAGCCTGCCGGCA...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCGACCTGGGACCTTGCTaGGCCAGTCCTCCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPDLGPC*ASPPQA
Trigger: GGCCTGCGGAGGACTGGCCCAGCAAGGTCCCAGGTC...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCGACCTGGGACCTTGCTaGGCCAGTCCTCCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPADLGPC*ASPPQA
Trigger: GGCCTGCGGAGGACTGGCCCAGCAAGGTCCCAGGTC...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGAGGAGAGGGAAGACCTaGGACCTTGCTGGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGRRGKT*DLAGPV
Trigger: GACTGGCCCAGCAAGGTCCCAGGTCTTCCCTCTCCT...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCGGTCCACCACGGGCTTaGGGCGCCGCAGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPGPPRA*GAAVCP
Trigger: TGGACACACTGCGGCGCCCCAAGCCCGTGGTGGACC...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGACTGTCTTCATGGGCTaGAGCTGCACCCGTGTGATT +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRRETVFMG*SCTRVI
Trigger: AATCACACGGGTGCAGCTCCAGCCCATGAAGACAGT...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGGCACCACTGTCTTCATaGGCTGGAGCTGCACCCGTG +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGAPLSS*AGAAPV
Trigger: CACGGGTGCAGCTCCAGCCCATGAAGACAGTGGTGC...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGACATGTCTGGGTCGGTaGCCCAGTGCTCATCCCCCA +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGTCLGR*PSAHPP
Trigger: TGGGGGATGAGCACTGGGCCACCGACCCAGACATGT...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGATCAGACTGGGGGCTCTaGAGGTACATGTCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRSDWGL*RYMSGS
Trigger: CGACCCAGACATGTACCTCCAGAGCCCCCAGTCTGA...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCTGCTTGTGGCCTGCTaGTGTGCCCCCGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPLLVAC*CAPVAA
Trigger: AGCTGCAACGGGGGCACACCAGCAGGCCACAAGCAG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCTTGCAGCCAGCCCATTaGGCAGGACCCGTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCLQPAH*AGPVGS
Trigger: AGAGCCCACGGGTCCTGCCCAATGGGCTGGCTGCAA...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCTTGCAGCCAGCCCATTaGGCAGGACCCGTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPLQPAH*AGPVGS
Trigger: AGAGCCCACGGGTCCTGCCCAATGGGCTGGCTGCAA...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCGCCTATTGGTGCCCGTaGGGGGCGAGGCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPAYWCP*GARLLV
Trigger: CACCAGGAGCCTCGCCCCCCACGGGCACCAATAGGC...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCGGGCTGTGGCAGCAGTaGACAGGAACATGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGGLWQQ*TGTCFG
Trigger: TCCGAAGCATGTTCCTGTCCACTGCTGCCACAGCCC...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGCAACCGTGGGGTCCTaGGGCAGGTACAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPATVGS*GRYRLL
Trigger: CAGCAACCTGTACCTGCCCCAGGACCCCACGGTTGC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCACCCTTGGCAACCGTaGGGTCCTGGGGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPHPWQP*GPGAGT
Trigger: TGTACCTGCCCCAGGACCCCACGGTTGCCAAGGGTG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGCTTCATGGCTTGCACTaGGGAGTCACTGAAGTACGG +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRRELHGLH*GVTEVR
Trigger: CCGTACTTCAGTGACTCCCCAGTGCAAGCCATGAAG...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260404.8
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGCCCGGAGCCTCTTCATaGCTTGCACTGGGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGPGASS*LALGSH
Trigger: GTGACTCCCCAGTGCAAGCCATGAAGAGGCTCCGGG...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGGTTTTTCAGCTTGGGTaGGGGGCTGTCCCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGVFQLG*GAVPEP
Trigger: AGGCTCCGGGACAGCCCCCCACCCAAGCTGAAAAAC...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGCTGTGGCTCTCTCTTaGGGGTCCCGCACCAGCATC +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPAVALS*GSRTSI
Trigger: GATGCTGGTGCGGGACCCCCAAGAGAGAGCCACAGC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGGTGGCAGGCATACTTaGGGTGGGCTCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCGGRHT*GGLSRW
Trigger: CCACCTGCTGAGCCCACCCCAAGTATGCCTGCCACC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGCCTGTGGGCGTAGGTaGCAGGCATACTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCACGRR*QAYLGW
Trigger: CCACCCCAAGTATGCCTGCCACCTACGCCCACAGGC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCGTCCTGCCGGCAGGCTaGCTGCCCAGTGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCVLPAG*LPSVPC
Trigger: GCAGGGCACACTGGGCAGCCAGCCTGCCGGCAGGAC...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGATGGTTTGCACACATaGATGCCTGTGACCTTGACA +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRDGLHT*MPVTLT
Trigger: TGTCAAGGTCACAGGCATCCATGTGTGCAAACCATC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGACCGAAACATCCCCGTaGGAGATGAGTTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRRETETSP*EMSSEP
Trigger: TGGCTCTGAACTCATCTCCCACGGGGATGTTTCGGT...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCTCTCTCTTAGGCGCTaGGGAGAGGGAAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPLSLRR*GEGRPG
Trigger: CCCAGGTCTTCCCTCTCCTCAGCGCCTAAGAGAGAG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR TCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGCGCTGCGAGGCACCCTaGAACTCGGCGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRRCEAP*NSAGPR
Trigger: CCTGGGCCCCGCCGAGTTTCAGGGTGCCTCGCAGCG...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATGCACTGGGGAGTCACTaGAGTACGGTGGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYALGSH*STVAPH
Trigger: ATGGGGAGCCACCGTACTTCAGTGACTCCCCAGTGC...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260404.8
ENST00000560346.5
CDS-3UTR TCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGCACTGGGGAGTCACTaGAGTACGGTGGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPALGSH*STVAPH
Trigger: ATGGGGAGCCACCGTACTTCAGTGACTCCCCAGTGC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000542403.3
ENST00000560346.5
CDS-3UTR TCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCCATCCCCGTGGGAGATaGGTTCAGAGCCAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPHPRGR*VQSQPG
Trigger: CCCGGGCTGGCTCTGAACTCATCTCCCACGGGGATG...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCTCTGCTGGACCCAGCTaGTGTCCCCAGCAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPASAGPS*CPQQGD
Trigger: GTCCCCCTGCTGGGGACAGCAGCTGGGTCCAGCAGA...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000260404.8
CDS-3UTR GCA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCTTCATGGGCTGGAGCTaGACCCGTGTGATTCGCGAA +
Preference number: 4 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGFMGWS*TRVIRE
Trigger: TTCGCGAATCACACGGGTGCAGCTCCAGCCCATGAA...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCGCCGGCTGGTGGGGCTaGGGCCACGCAGGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVAGWWG*GHAGCW
Trigger: CCAACACCCTGCGTGGCCGCAGCCCCACCAGCCGGC...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGCATCTGCTTGTGGCCTaGTGGTGTGCCCCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: VEARPRKQVPSGQNLVGEHLLVA*WCAPVA
Trigger: TGCAACGGGGGCACACCAGCAGGCCACAAGCAGATG...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCATCTGCTTGTGGCCTaGTGGTGTGCCCCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPHLLVA*WCAPVA
Trigger: TGCAACGGGGGCACACCAGCAGGCCACAAGCAGATG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCAGGGACTGTGCCTTTaGAGCCAGCCCATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPQGLCL*SQPIGQ
Trigger: CTGCCCAATGGGCTGGCTGCAAAGGCACAGTCCCTG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR GCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGAGCCTCCTCAGAGCCATaGTTGGCAGCCTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRASSEP*LAAFIP
Trigger: TGGAATGAAGGCTGCCAAGCATGGCTCTGAGGAGGC...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGTGCTTCGGAATAGCCTaGGCTTCAGGCTGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGCFGIA*ASGCSP
Trigger: GGGAGAGCAGCCTGAAGCGCAGGCTATTCCGAAGCA...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR GCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGGGGACTTCTGGGGGCTaGTGGTATCCGAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGGTSGG*WYPKWS
Trigger: TGACCACTTCGGATACCAGCAGCCCCCAGAAGTCCC...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR GCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCCCGAGAGCTTCACCCTaGCATCGAGGGTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCPRASP*HRGSAG
Trigger: TCCTGCTGACCCTCGATGGCAGGGTGAAGCTCTCGG...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCGCTGGCTGCCCAGTGTaGCCTGCCTGTGGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCAGCPV*PACGRR
Trigger: CCTACGCCCACAGGCAGGGCACACTGGGCAGCCAGC...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGACTCTGGCCCTCACGATaGACAGTACAGGAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRLWPSR*TVQEKL
Trigger: GAGCTTCTCCTGTACTGTGCATCGTGAGGGCCAGAG...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAGTCACCTGGATGGCTaGTGGCGGCTCCTGGCACAT +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCSHLDG*WRLLAH
Trigger: ATGTGCCAGGAGCCGCCAGCAGCCATCCAGGTGACT...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS-3UTR GCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGGGGGCGGGACTCAGGTaGAGCTCCAAGTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VEARPRKQVPSGQNLVGEGAGLR*SSKFPA
Trigger: AGCTGGAAACTTGGAGCTGCACCTGAGTCCCGCCCC...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGATTCTCCACTGCAGGCTaGTGCTTGTCTCTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRFSTAG*CLSLAQ
Trigger: CTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAA...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCGTGGCTGCTCCTTCTaGGCAGCGGGGTCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPARGCSF*AAGSCV
Trigger: AACGCAGGACCCCGCTGCCCAGAAGGAGCAGCCACG...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAGGAGAGGGAAGACCTaGGACCTTGCTGGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCRRGKT*DLAGPV
Trigger: GACTGGCCCAGCAAGGTCCCAGGTCTTCCCTCTCCT...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGGAGAGGGAAGACCTaGGACCTTGCTGGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPRRGKT*DLAGPV
Trigger: GACTGGCCCAGCAAGGTCCCAGGTCTTCCCTCTCCT...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCACTCCTCACCCGCACTaGGCCTCTCTCTTAGGCGCT +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCTPHPH*ASLLGA
Trigger: AGCGCCTAAGAGAGAGGCCCAGTGCGGGTGAGGAGT...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCACTCCTCACCCGCACTaGGCCTCTCTCTTAGGCGCT +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPTPHPH*ASLLGA
Trigger: AGCGCCTAAGAGAGAGGCCCAGTGCGGGTGAGGAGT...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGGTGTGGACACGGTGCTaGAAGTTCTGTGGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGVWTRC*KFCGAE
Trigger: CTCAGCGCCACAGAACTTCCAGCACCGTGTCCACAC...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCGGTCCACCACGGGCTTaGGGCGCCGCAGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCGPPRA*GAAVCP
Trigger: TGGACACACTGCGGCGCCCCAAGCCCGTGGTGGACC...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGCACCACTGTCTTCATaGGCTGGAGCTGCACCCGTG +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCAPLSS*AGAAPV
Trigger: CACGGGTGCAGCTCCAGCCCATGAAGACAGTGGTGC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCTGGAGGTACATGTCTaGGTCGGTGGCCCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPLEVHV*VGGPVL
Trigger: GAGCACTGGGCCACCGACCCAGACATGTACCTCCAG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCCACGGCATCTGCTTGTaGCCTGCTGGTGTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPHGICL*PAGVPP
Trigger: CGGGGGCACACCAGCAGGCCACAAGCAGATGCCGTG...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGGGGCTGTGGCAGCAGTaGACAGGAACATGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGGLWQQ*TGTCFG
Trigger: TCCGAAGCATGTTCCTGTCCACTGCTGCCACAGCCC...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGTTGGGCTTGCTCTGTaGTGGAGGGCCTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPVGLAL*WRAWLA
Trigger: AGCAAGCCAGGCCCTCCACCACAGAGCAAGCCCAAC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGGTGCGGAGGGACTTCTaGGGGCTGCTGGTATCCGAA +
Preference number: 4 (lower is better)
Translates to: VEARPRKQVPSGQNLVGEVRRDF*GLLVSE
Trigger: TTCGGATACCAGCAGCCCCCAGAAGTCCCTCCGCAC...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGTGCGGAGGGACTTCTaGGGGCTGCTGGTATCCGAA +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPVRRDF*GLLVSE
Trigger: TTCGGATACCAGCAGCCCCCAGAAGTCCCTCCGCAC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp CAGGCCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCTTCATGGCTTGCACTaGGGAGTCACTGAAGTACGG +
Preference number: 4 (lower is better)
Translates to: QAIHSSGRGGAVQVGLHLLHGLH*GVTEVR
Trigger: CCGTACTTCAGTGACTCCCCAGTGCAAGCCATGAAG...AAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260404.8
ENST00000560346.5
CDS-3UTR CCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGGTTTTTCAGCTTGGGTaGGGGGCTGTCCCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: VEARPRKQVPSGQNLVGEVFQLG*GAVPEP
Trigger: AGGCTCCGGGACAGCCCCCCACCCAAGCTGAAAAAC...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260404.8
ENST00000560346.5
CDS-3UTR CCA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATCAGGCATACTTGGGGTaGGCTCAGCAGGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYQAYLG*AQQVEV
Trigger: GACCTCCACCTGCTGAGCCCACCCCAAGTATGCCTG...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCGGCAGAGGGTGGGGCTaGGGCTTCACATTTCAATCT +
Preference number: 4 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGGRGWG*GFTFQS
Trigger: AGATTGAAATGTGAAGCCCCAGCCCCACCCTCTGCC...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGGCCATTCACAGTTCTaGGCGGGGAGGGGCTGTACA +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCGHSQF*AGRGCT
Trigger: TGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGCGCCCCGGCTCACTTTaGGATTTCTCCATTAAATCC +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRRERPGSL*DFSIKS
Trigger: GGATTTAATGGAGAAATCCCAAAGTGAGCCGGGGCG...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS-3UTR CCA 90 bp CAGGCCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTACCGAAACATCCCCGTaGGAGATGAGTTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: QAIHSSGRGGAVQVGLHLTETSP*EMSSEP
Trigger: TGGCTCTGAACTCATCTCCCACGGGGATGTTTCGGT...AAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGGATAGGGTTTTGGGGTaGGCTCAGCAGGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGDRVLG*AQQVEV
Trigger: GACCTCCACCTGCTGAGCCCACCCCAAAACCCTATC...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGTCCCAGATAGGGTTTTaGGGTGGGCTCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGSQIGF*GGLSRW
Trigger: CCACCTGCTGAGCCCACCCCAAAACCCTATCTGGGA...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR TCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGAGAAGTTCTGTGGCGCTaGGATCTCAGGGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: PLHWPGRHRSGEVEARPREVLWR*DLRAFL
Trigger: AAGAAACGCCCTGAGATCTCAGCGCCACAGAACTTC...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGACTTCTGGATGTCGTTaGGCAGCCCCGAGATGTAGC +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGTSGCR*AAPRCS
Trigger: GCTACATCTCGGGGCTGCTCAACGACATCCAGAAGT...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR TCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGCCCCCGTTGCAGCTaGGGTAGAGGCCGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQICPRCS*GRGRGG
Trigger: ACCCCCACGGCCTCTACCTCAGCTGCAACGGGGGCA...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCGGGAGACGATGTCTGTaGGGGCTCCTCCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPGRRCL*GLLPAG
Trigger: TCCTGCAGGGAGGAGCCCTCACAGACATCGTCTCCC...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp CAGGCCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTACGTCTTTGCTGATCTaGGCACAGAATCCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: QAIHSSGRGGAVQVGLHLTSLLI*AQNPKS
Trigger: GGACTTCGGATTCTGTGCTCAGATCAGCAAAGACGT...AAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCATCTCACAGCAGCCCTaGAGTGGGGCAGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCISQQP*SGAGPR
Trigger: CCTCGGCCCTGCCCCACTTCAGGGCTGCTGTGAGAT...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGAAGGGTCCAGACACCTaGAGTTCTTTCCTGGAATTC +
Preference number: 4 (lower is better)
Translates to: GRGGAVQVGLHLQDIRREKGPDT*SSFLEF
Trigger: GAATTCCAGGAAAGAACTTCAGGTGTCTGGACCCTT...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCATCCCCGTGGGAGATaGGTTCAGAGCCAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCHPRGR*VQSQPG
Trigger: CCCGGGCTGGCTCTGAACTCATCTCCCACGGGGATG...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGTCCGCAGGCCGTGGCTaGTCCTTCTGGGCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRSAGRG*SFWAAG
Trigger: CCCCGCTGCCCAGAAGGAGCAGCCACGGCCTGCGGA...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCTCCGCAGGCCGTGGCTaGTCCTTCTGGGCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVSAGRG*SFWAAG
Trigger: CCCCGCTGCCCAGAAGGAGCAGCCACGGCCTGCGGA...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGAGGTGTGGACACGGTaGTGGAAGTTCTGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPEVWTR*WKFCGA
Trigger: AGCGCCACAGAACTTCCAGCACCGTGTCCACACCTC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGGGAGGCCCACAAACTTaGCTTCTTTGGGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGGGPQT*LLWGRR
Trigger: CCTTCGACCCCAAAGAAGGCAAGTTTGTGGGCCTCC...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR GCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGTTCATGGGCTGGAGCTaGACCCGTGTGATTCGCGAA +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGFMGWS*TRVIRE
Trigger: TTCGCGAATCACACGGGTGCAGCTCCAGCCCATGAA...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR GCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCCCACAGGCATCGCGCTaGCCCGCACCACTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPPQASR*PAPLSS
Trigger: TGAAGACAGTGGTGCGGGGCAGCGCGATGCCTGTGG...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCACAGGCATCGCGCTaGCCCGCACCACTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPAPQASR*PAPLSS
Trigger: TGAAGACAGTGGTGCGGGGCAGCGCGATGCCTGTGG...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAGGCCGTGGGGGTCAGTaGGCTCAGACTGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIGRGGQ*AQTGGS
Trigger: AGAGCCCCCAGTCTGAGCGCACTGACCCCCACGGCC...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGACATCTGCTTGTGGCCTaGTGGTGTGCCCCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGHLLVA*WCAPVA
Trigger: TGCAACGGGGGCACACCAGCAGGCCACAAGCAGATG...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCTCGGGCCACGGCATCTaGTTGTGGCCTGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPASGHGI*LWPAGV
Trigger: CACACCAGCAGGCCACAAGCAGATGCCGTGGCCCGA...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGACAGGGACTGTGCCTTTaGAGCCAGCCCATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGQGLCL*SQPIGQ
Trigger: CTGCCCAATGGGCTGGCTGCAAAGGCACAGTCCCTG...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATACCTGGTGGGGAGCTCTaGAGGCAGGCACCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIPGGEL*RQAPSC
Trigger: GCAGCTGGGTGCCTGCCTGCAGAGCTCCCCACCAGG...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGCAGCCTTCATTCCATaGCTATTGGTGCCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPAAFIP*LLVPVG
Trigger: CCCCACGGGCACCAATAGGCATGGAATGAAGGCTGC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGGCCTCCTCAGAGCCATaGTTGGCAGCCTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGASSEP*LAAFIP
Trigger: TGGAATGAAGGCTGCCAAGCATGGCTCTGAGGAGGC...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR GCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGTGCTTCGGAATAGCCTaGGCTTCAGGCTGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: VEARPRKQVPSGQNLVGECFGIA*ASGCSP
Trigger: GGGAGAGCAGCCTGAAGCGCAGGCTATTCCGAAGCA...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCTGCTTCGGAATAGCCTaGGCTTCAGGCTGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCCFGIA*ASGCSP
Trigger: GGGAGAGCAGCCTGAAGCGCAGGCTATTCCGAAGCA...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAAGAGGAGTTGGGCTTaGTCTGTGGTGGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPKRSWA*SVVEGL
Trigger: CAGGCCCTCCACCACAGAGCAAGCCCAACTCCTCTT...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR GCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGCTGTGGCCGGGGCTGTaGGGAGGGACTTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRLWPGL*GGTSGG
Trigger: GCCCCCAGAAGTCCCTCCGCACAGCCCCGGCCACAG...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAACCTGGCGGCCCGAGTaGTTCTCCCGGGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQITWRPE*FSRAKQ
Trigger: CTGCTTGGCCCGGGAGAAGCACTCGGGCCGCCAGGT...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGCTCCCTGCGCTGCTaGTTCCTGAGGTCCATCATC +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPSSLRC*FLRSII
Trigger: GATGATGGACCTCAGGAAGCAGCAGCGCAGGGAGCT...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR GCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCTCAGGTAGCCCTGTCTaGAGCAGGAAGGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCSGSPV*SRKGWS
Trigger: AGACCACCCCTTCCTGCTGCAGACAGGGCTACCTGA...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCTCAGGTAGCCCTGTCTaGAGCAGGAAGGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPSGSPV*SRKGWS
Trigger: AGACCACCCCTTCCTGCTGCAGACAGGGCTACCTGA...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR GCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGCCGGCAGGCTGGCTaGCCAGTGTGCCCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQICRQAG*PVCPAC
Trigger: ACAGGCAGGGCACACTGGGCAGCCAGCCTGCCGGCA...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CAGGCCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCACCATATCTGCTATTaGACTCTGCCTGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: QAIHSSGRGGAVQVGLHLHHICY*TLPAAT
Trigger: TGTGGCAGCAGGCAGAGTGCAATAGCAGATATGGTG...AAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGAACTCCTCACCCGCACTaGGCCTCTCTCTTAGGCGCT +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGTPHPH*ASLLGA
Trigger: AGCGCCTAAGAGAGAGGCCCAGTGCGGGTGAGGAGT...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGTTTTCTTGCGGAACATaGTGCCTTCCGGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGFSCGT*CLPAPS
Trigger: GGAAGGCGCCGGAAGGCACCATGTTCCGCAAGAAAA...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGTGTGGACACGGTGCTaGAAGTTCTGTGGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCVWTRC*KFCGAE
Trigger: CTCAGCGCCACAGAACTTCCAGCACCGTGTCCACAC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATGTGTGGACACGGTGCTaGAAGTTCTGTGGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYVWTRC*KFCGAE
Trigger: CTCAGCGCCACAGAACTTCCAGCACCGTGTCCACAC...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCGATGTTCTGCCATTGTaGGGGGAGGCCCACAAACTT +
Preference number: 4 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGDVLPL*GEAHKL
Trigger: AAGTTTGTGGGCCTCCCCCCACAATGGCAGAACATC...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCTCAGACTGGGGGCTCTaGAGGTACATGTCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCSDWGL*RYMSGS
Trigger: CGACCCAGACATGTACCTCCAGAGCCCCCAGTCTGA...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCTCAGACTGGGGGCTCTaGAGGTACATGTCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPSDWGL*RYMSGS
Trigger: CGACCCAGACATGTACCTCCAGAGCCCCCAGTCTGA...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGTCAGTGCGCTCAGACTaGGGGCTCTGGAGGTACATG +
Preference number: 4 (lower is better)
Translates to: VEARPRKQVPSGQNLVGESVRSD*GLWRYM
Trigger: CATGTACCTCCAGAGCCCCCAGTCTGAGCGCACTGA...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCTCAGTGCGCTCAGACTaGGGGCTCTGGAGGTACATG +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPSVRSD*GLWRYM
Trigger: CATGTACCTCCAGAGCCCCCAGTCTGAGCGCACTGA...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCCTGCTTGTGGCCTGCTaGTGTGCCCCCGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPLLVAC*CAPVAA
Trigger: AGCTGCAACGGGGGCACACCAGCAGGCCACAAGCAG...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAGCCTATTGGTGCCCGTaGGGGGCGAGGCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIAYWCP*GARLLV
Trigger: CACCAGGAGCCTCGCCCCCCACGGGCACCAATAGGC...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGCCTCAGAGCCATGCTTaGCAGCCTTCATTCCATGCC +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGPQSHA*QPSFHA
Trigger: GGCATGGAATGAAGGCTGCCAAGCATGGCTCTGAGG...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGGGCTGTGGCAGCAGTaGACAGGAACATGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCGLWQQ*TGTCFG
Trigger: TCCGAAGCATGTTCCTGTCCACTGCTGCCACAGCCC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCATCTTGACGGCCACCTaGCGGCCCGAGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPAILTAT*RPECFS
Trigger: GGAGAAGCACTCGGGCCGCCAGGTGGCCGTCAAGAT...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGAGAAGTCTCGCAGCACTaGGGAGACCTTGTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: PLHWPGRHRSGEVEARPREVSQH*GDLVRV
Trigger: AACTCTCACAAGGTCTCCCCAGTGCTGCGAGACTTC...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260404.8
ENST00000560346.5
CDS-3UTR CCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCGCTGTGGCTCTCTCTTaGGGGTCCCGCACCAGCATC +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPAVALS*GSRTSI
Trigger: GATGCTGGTGCGGGACCCCCAAGAGAGAGCCACAGC...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATTGGTCTAGGAGCTCCTaGGCTGTGGCTCTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYWSRSS*AVALSW
Trigger: CCAAGAGAGAGCCACAGCCCAGGAGCTCCTAGACCA...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCTGGTCTAGGAGCTCCTaGGCTGTGGCTCTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPWSRSS*AVALSW
Trigger: CCAAGAGAGAGCCACAGCCCAGGAGCTCCTAGACCA...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGTGGTCTAGGAGCTCCTaGGCTGTGGCTCTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: VEARPRKQVPSGQNLVGEWSRSS*AVALSW
Trigger: CCAAGAGAGAGCCACAGCCCAGGAGCTCCTAGACCA...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGGTGGGCTCAGCAGGTaGAGGTCTGCTTTCGGTAGA +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCGGLSR*RSAFGR
Trigger: TCTACCGAAAGCAGACCTCCACCTGCTGAGCCCACC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGGTGGGCTCAGCAGGTaGAGGTCTGCTTTCGGTAGA +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPGGLSR*RSAFGR
Trigger: TCTACCGAAAGCAGACCTCCACCTGCTGAGCCCACC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGGGTGGGCTCAGCAGGTaGAGGTCTGCTTTCGGTAGA +
Preference number: 4 (lower is better)
Translates to: VEARPRKQVPSGQNLVGEGGLSR*RSAFGR
Trigger: TCTACCGAAAGCAGACCTCCACCTGCTGAGCCCACC...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGACAGGCATACTTGGGGTaGGCTCAGCAGGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGQAYLG*AQQVEV
Trigger: GACCTCCACCTGCTGAGCCCACCCCAAGTATGCCTG...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGTCCTGCCGGCAGGCTaGCTGCCCAGTGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRVLPAG*LPSVPC
Trigger: GCAGGGCACACTGGGCAGCCAGCCTGCCGGCAGGAC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGGTCTGCCCTCTGCAGTaGCCTAGGACACTAGTGGAC +
Preference number: 4 (lower is better)
Translates to: VEARPRKQVPSGQNLVGEVCPLQ*PRTLVD
Trigger: GTCCACTAGTGTCCTAGGCCACTGCAGAGGGCAGAC...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGGCAGCTGGGGCAGATaGTTTGCACACATGGATGCC +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPGSWGR*FAHMDA
Trigger: GGCATCCATGTGTGCAAACCATCTGCCCCAGCTGCC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGGCAGCTGGGGCAGATaGTTTGCACACATGGATGCC +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCGSWGR*FAHMDA
Trigger: GGCATCCATGTGTGCAAACCATCTGCCCCAGCTGCC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGTCTGTGGAGGCAGCTaGGGCAGATGGTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCVCGGS*GRWFAH
Trigger: GTGTGCAAACCATCTGCCCCAGCTGCCTCCACAGAC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGTCTGTGGAGGCAGCTaGGGCAGATGGTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPVCGGS*GRWFAH
Trigger: GTGTGCAAACCATCTGCCCCAGCTGCCTCCACAGAC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR TCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCCTCTCTCTTAGGCGCTaGGGAGAGGGAAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPLSLRR*GEGRPG
Trigger: CCCAGGTCTTCCCTCTCCTCAGCGCCTAAGAGAGAG...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGTGCCCCCGTTGCAGCTaGGGTAGAGGCCGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRCPRCS*GRGRGG
Trigger: ACCCCCACGGCCTCTACCTCAGCTGCAACGGGGGCA...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGCTCCTCATTCAGCCTaGCTTGGGAGACGATGTCTG +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPAPHSA*LGRRCL
Trigger: CAGACATCGTCTCCCAAGTCAGGCTGAATGAGGAGC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR TCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAGCTCAGAAGCCTCCTaGGCTCCCAGGAGTGTTAGA +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCSSEAS*APRSVR
Trigger: TCTAACACTCCTGGGAGCTCAGGAGGCTTCTGAGCT...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCCTGTGACCTTGACATaGTGGAAACCCGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPPVTLT*WKPGGG
Trigger: ACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR GCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGGCCGTGGGGGTCAGTaGGCTCAGACTGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYGRGGQ*AQTGGS
Trigger: AGAGCCCCCAGTCTGAGCGCACTGACCCCCACGGCC...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCCAGGGACTGTGCCTTTaGAGCCAGCCCATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPQGLCL*SQPIGQ
Trigger: CTGCCCAATGGGCTGGCTGCAAAGGCACAGTCCCTG...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAAGGCAGGCACCCAGCTaGAGACAGCGCTGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIRQAPS*RQRCEA
Trigger: TGCCTCGCAGCGCTGTCTGCAGCTGGGTGCCTGCCT...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGAGCAGCCTTCATTCCATaGCTATTGGTGCCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGAAFIP*LLVPVG
Trigger: CCCCACGGGCACCAATAGGCATGGAATGAAGGCTGC...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGCCTCCTCAGAGCCATaGTTGGCAGCCTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCASSEP*LAAFIP
Trigger: TGGAATGAAGGCTGCCAAGCATGGCTCTGAGGAGGC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGATGCTTCGGAATAGCCTaGGCTTCAGGCTGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGCFGIA*ASGCSP
Trigger: GGGAGAGCAGCCTGAAGCGCAGGCTATTCCGAAGCA...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGCTGTGGCCGGGGCTGTaGGGAGGGACTTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLLWPGL*GGTSGG
Trigger: GCCCCCAGAAGTCCCTCCGCACAGCCCCGGCCACAG...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGACCTGGCGGCCCGAGTaGTTCTCCCGGGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRTWRPE*FSRAKQ
Trigger: CTGCTTGGCCCGGGAGAAGCACTCGGGCCGCCAGGT...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGCTGGCTGCCCAGTGTaGCCTGCCTGTGGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRAGCPV*PACGRR
Trigger: CCTACGCCCACAGGCAGGGCACACTGGGCAGCCAGC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCTTCTACTGTGTTGGCTaGAGAGGCCAGGAACGCTGG +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCFYCVG*RGQERW
Trigger: CCAGCGTTCCTGGCCTCTGCAGCCAACACAGTAGAA...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGTTCTACTGTGTTGGCTaGAGAGGCCAGGAACGCTGG +
Preference number: 4 (lower is better)
Translates to: VEARPRKQVPSGQNLVGEFYCVG*RGQERW
Trigger: CCAGCGTTCCTGGCCTCTGCAGCCAACACAGTAGAA...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCCTCTGGCCCTCACGATaGACAGTACAGGAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCLWPSR*TVQEKL
Trigger: GAGCTTCTCCTGTACTGTGCATCGTGAGGGCCAGAG...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGTCCTCCGCAGGCCGTaGCTGCTCCTTCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRVLRRP*LLLLGS
Trigger: GCTGCCCAGAAGGAGCAGCCACGGCCTGCGGAGGAC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCGACCTGGGACCTTGCTaGGCCAGTCCTCCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVDLGPC*ASPPQA
Trigger: GGCCTGCGGAGGACTGGCCCAGCAAGGTCCCAGGTC...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGACCTGGGACCTTGCTaGGCCAGTCCTCCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRDLGPC*ASPPQA
Trigger: GGCCTGCGGAGGACTGGCCCAGCAAGGTCCCAGGTC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCAGGAGAGGGAAGACCTaGGACCTTGCTGGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPRRGKT*DLAGPV
Trigger: GACTGGCCCAGCAAGGTCCCAGGTCTTCCCTCTCCT...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCACTCCTCACCCGCACTaGGCCTCTCTCTTAGGCGCT +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPTPHPH*ASLLGA
Trigger: AGCGCCTAAGAGAGAGGCCCAGTGCGGGTGAGGAGT...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGTTTTCTTGCGGAACATaGTGCCTTCCGGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: VEARPRKQVPSGQNLVGEFSCGT*CLPAPS
Trigger: GGAAGGCGCCGGAAGGCACCATGTTCCGCAAGAAAA...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCTTTTCTTGCGGAACATaGTGCCTTCCGGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCFSCGT*CLPAPS
Trigger: GGAAGGCGCCGGAAGGCACCATGTTCCGCAAGAAAA...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGGATGTTCTGCCATTGTaGGGGGAGGCCCACAAACTT +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGDVLPL*GEAHKL
Trigger: AAGTTTGTGGGCCTCCCCCCACAATGGCAGAACATC...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGGTCCACCACGGGCTTaGGGCGCCGCAGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYGPPRA*GAAVCP
Trigger: TGGACACACTGCGGCGCCCCAAGCCCGTGGTGGACC...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCCACCACGGGCTTaGGGCGCCGCAGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRGPPRA*GAAVCP
Trigger: TGGACACACTGCGGCGCCCCAAGCCCGTGGTGGACC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGACTGTCTTCATGGGCTaGAGCTGCACCCGTGTGATT +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGTVFMG*SCTRVI
Trigger: AATCACACGGGTGCAGCTCCAGCCCATGAAGACAGT...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCACATGTCTGGGTCGGTaGCCCAGTGCTCATCCCCCA +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPTCLGR*PSAHPP
Trigger: TGGGGGATGAGCACTGGGCCACCGACCCAGACATGT...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCCTGGAGGTACATGTCTaGGTCGGTGGCCCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPLEVHV*VGGPVL
Trigger: GAGCACTGGGCCACCGACCCAGACATGTACCTCCAG...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCTGCTTGTGGCCTGCTaGTGTGCCCCCGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCLLVAC*CAPVAA
Trigger: AGCTGCAACGGGGGCACACCAGCAGGCCACAAGCAG...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGACCCGTGGGCTCTGTaGCTCGGGCCACGGCATCTG +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYDPWAL*LGPRHL
Trigger: CAGATGCCGTGGCCCGAGCCACAGAGCCCACGGGTC...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGCCTATTGGTGCCCGTaGGGGGCGAGGCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRAYWCP*GARLLV
Trigger: CACCAGGAGCCTCGCCCCCCACGGGCACCAATAGGC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGTCGGAAAGAGGAGTTaGGCTTGCTCTGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPVGKRS*ACSVVE
Trigger: CTCCACCACAGAGCAAGCCCAACTCCTCTTTCCGAC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAAAGGTCCCCACCGGCTaGTCCGAGGGCAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIKVPTG*SEGKDW
Trigger: CCAGTCCTTGCCCTCGGACCAGCCGGTGGGGACCTT...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCACTTCTGGGGGCTGCTaGTATCCGAAGTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCTSGGC*YPKWSE
Trigger: CTCTGACCACTTCGGATACCAGCAGCCCCCAGAAGT...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCACTTCTGGGGGCTGCTaGTATCCGAAGTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPTSGGC*YPKWSE
Trigger: CTCTGACCACTTCGGATACCAGCAGCCCCCAGAAGT...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATTGGGGAAGACCGGCCTaGAAGCTGGCCTGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYWGRPA*KLACGR
Trigger: CCGGCCACAGGCCAGCTTCCAGGCCGGTCTTCCCCA...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCTGGGGAAGACCGGCCTaGAAGCTGGCCTGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVWGRPA*KLACGR
Trigger: CCGGCCACAGGCCAGCTTCCAGGCCGGTCTTCCCCA...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGCAGCCAGGGCACCCTTaGCAACCGTGGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRQPGHP*QPWGPG
Trigger: CCCAGGACCCCACGGTTGCCAAGGGTGCCCTGGCTG...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAAGCCGGGGGTCACCCTaGTCCACCACCATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQISRGSP*STTILS
Trigger: GCTCAGGATGGTGGTGGACCAGGGTGACCCCCGGCT...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCTCATTCAGCCTGACTTaGGAGACGATGTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGSFSLT*ETMSVR
Trigger: CCTCACAGACATCGTCTCCCAAGTCAGGCTGAATGA...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGCTTCATGGCTTGCACTaGGGAGTCACTGAAGTACGG +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGLHGLH*GVTEVR
Trigger: CCGTACTTCAGTGACTCCCCAGTGCAAGCCATGAAG...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGGAAGTCTCGCAGCACTaGGGAGACCTTGTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGEVSQH*GDLVRV
Trigger: AACTCTCACAAGGTCTCCCCAGTGCTGCGAGACTTC...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGGCAGAGGGTGGGGCTaGGGCTTCACATTTCAATCT +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCGRGWG*GFTFQS
Trigger: AGATTGAAATGTGAAGCCCCAGCCCCACCCTCTGCC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATACAGGAGTGGAGAGGTaGAAGCCAGGCCAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYTGVER*KPGQES
Trigger: GCTTTCTTGGCCTGGCTTCCACCTCTCCACTCCTGT...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATCATGGACCACTCCACTaGCCAGGTAGACACAGGAGT +
Preference number: 4 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYHGPLH*PGRHRS
Trigger: ACTCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATG...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGATGGAAACCCGGAGGTaGTTCGCCTTCTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VEARPRKQVPSGQNLVGEMETRR*FAFSPR
Trigger: TCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCAT...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCATGGAAACCCGGAGGTaGTTCGCCTTCTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPMETRR*FAFSPR
Trigger: TCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCAT...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR TCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGAAGTTCTGTGGCGCTaGGATCTCAGGGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCEVLWR*DLRAFL
Trigger: AAGAAACGCCCTGAGATCTCAGCGCCACAGAACTTC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGAAGTTCTGTGGCGCTaGGATCTCAGGGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPEVLWR*DLRAFL
Trigger: AAGAAACGCCCTGAGATCTCAGCGCCACAGAACTTC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR TCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAGGAGCTGCACCCGTGTaGTTCGCGAAGGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIGAAPV*FAKGPP
Trigger: TGGTGGACCCTTCGCGAATCACACGGGTGCAGCTCC...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAAAGTGGTCAGAGGGCTaGAGGTCCCCACCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIKWSEG*RSPPAG
Trigger: ACCAGCCGGTGGGGACCTTCAGCCCTCTGACCACTT...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGAGCTCCTCATTCAGCCTaGCTTGGGAGACGATGTCTG +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGAPHSA*LGRRCL
Trigger: CAGACATCGTCTCCCAAGTCAGGCTGAATGAGGAGC...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGACGTCTTTGCTGATCTaGGCACAGAATCCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGTSLLI*AQNPKS
Trigger: GGACTTCGGATTCTGTGCTCAGATCAGCAAAGACGT...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR TCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAGAGGGGCAGCCTTCCTaGAACTGGCTGTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIEGQPS*NWLWVT
Trigger: GGTCACCCACAGCCAGTTTCAGGAAGGCTGCCCCTC...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGATCTCACAGCAGCCCTaGAGTGGGGCAGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRISQQP*SGAGPR
Trigger: CCTCGGCCCTGCCCCACTTCAGGGCTGCTGTGAGAT...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCAAGGGTCCAGACACCTaGAGTTCTTTCCTGGAATTC +
Preference number: 4 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGKGPDT*SSFLEF
Trigger: GAATTCCAGGAAAGAACTTCAGGTGTCTGGACCCTT...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAAGCTGCTCCTCACCCTaGTCAGGCCGTGTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQISCSSP*SGRVSG
Trigger: GCCAGACACACGGCCTGAGCAGGGTGAGGAGCAGCT...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260404.8
CDS-3UTR GCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGTGGGCAGCGGGGTCCTaGGTTCTCCACTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRWAAGS*VLHCRL
Trigger: CAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCA...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATTGGGCAGCGGGGTCCTaGGTTCTCCACTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYWAAGS*VLHCRL
Trigger: CAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCA...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTTCCGCAGGCCGTGGCTaGTCCTTCTGGGCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSSAGRG*SFWAAG
Trigger: CCCCGCTGCCCAGAAGGAGCAGCCACGGCCTGCGGA...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCGAGGTGTGGACACGGTaGTGGAAGTTCTGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPEVWTR*WKFCGA
Trigger: AGCGCCACAGAACTTCCAGCACCGTGTCCACACCTC...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGCCTGGTGGGGAGCTCTaGAGGCAGGCACCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLPGGEL*RQAPSC
Trigger: GCAGCTGGGTGCCTGCCTGCAGAGCTCCCCACCAGG...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGAGCCTCCTCAGAGCCATaGTTGGCAGCCTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGASSEP*LAAFIP
Trigger: TGGAATGAAGGCTGCCAAGCATGGCTCTGAGGAGGC...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCAGTGGACAGGAACATaGTTCGGAATAGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPQWTGT*FGIACA
Trigger: AGCGCAGGCTATTCCGAAGCATGTTCCTGTCCACTG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR GCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGTGGAGGGCCTGGCTTaGTGCTGCTTGGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYVEGLA*CCLEGL
Trigger: CAGCCCCTCCAAGCAGCAGCAAGCCAGGCCCTCCAC...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCAAGAGGAGTTGGGCTTaGTCTGTGGTGGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPKRSWA*SVVEGL
Trigger: CAGGCCCTCCACCACAGAGCAAGCCCAACTCCTCTT...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCAAGAGGAGTTGGGCTTaGTCTGTGGTGGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPAKRSWA*SVVEGL
Trigger: CAGGCCCTCCACCACAGAGCAAGCCCAACTCCTCTT...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGACCTGGCGGCCCGAGTaGTTCTCCCGGGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLTWRPE*FSRAKQ
Trigger: CTGCTTGGCCCGGGAGAAGCACTCGGGCCGCCAGGT...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCAGCTCCCTGCGCTGCTaGTTCCTGAGGTCCATCATC +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPSSLRC*FLRSII
Trigger: GATGATGGACCTCAGGAAGCAGCAGCGCAGGGAGCT...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCTCAGGTAGCCCTGTCTaGAGCAGGAAGGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPSGSPV*SRKGWS
Trigger: AGACCACCCCTTCCTGCTGCAGACAGGGCTACCTGA...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGCTGGCTGCCCAGTGTaGCCTGCCTGTGGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLAGCPV*PACGRR
Trigger: CCTACGCCCACAGGCAGGGCACACTGGGCAGCCAGC...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGAGGCAGGCAAGTCCTaGCGGCAGGCTGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLEAGKS*RQAGCP
Trigger: TGGGCAGCCAGCCTGCCGGCAGGACTTGCCTGCCTC...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGATTAGAAATATCCCTGTaGAAATATCAAGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRLEISL*KYQGVI
Trigger: GATGACCCCTTGATATTTGCACAGGGATATTTCTAA...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGCTGTACAGGTGGGACTaGACCTTCAGGACATCAGAC +
Preference number: 4 (lower is better)
Translates to: VEARPRKQVPSGQNLVGELYRWD*TFRTSD
Trigger: GTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAG...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGACTCTGGCCCTCACGATaGACAGTACAGGAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGLWPSR*TVQEKL
Trigger: GAGCTTCTCCTGTACTGTGCATCGTGAGGGCCAGAG...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGCGTGGCTGCTCCTTCTaGGCAGCGGGGTCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRRGCSF*AAGSCV
Trigger: AACGCAGGACCCCGCTGCCCAGAAGGAGCAGCCACG...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGATGTTCTGCCATTGTaGGGGGAGGCCCACAAACTT +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCDVLPL*GEAHKL
Trigger: AAGTTTGTGGGCCTCCCCCCACAATGGCAGAACATC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGACTGTCTTCATGGGCTaGAGCTGCACCCGTGTGATT +
Preference number: 4 (lower is better)
Translates to: VEARPRKQVPSGQNLVGETVFMG*SCTRVI
Trigger: AATCACACGGGTGCAGCTCCAGCCCATGAAGACAGT...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGATGACTGACAACTTCTaGATGTCGTTGAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGMTDNF*MSLSSP
Trigger: GGGGCTGCTCAACGACATCCAGAAGTTGTCAGTCAT...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGCACGGCATCTGCTTGTaGCCTGCTGGTGTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRHGICL*PAGVPP
Trigger: CGGGGGCACACCAGCAGGCCACAAGCAGATGCCGTG...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCACGGCATCTGCTTGTaGCCTGCTGGTGTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYHGICL*PAGVPP
Trigger: CGGGGGCACACCAGCAGGCCACAAGCAGATGCCGTG...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATATTGGGCAGGACCCGTaGGCTCTGTGGCTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYIGQDP*ALWLGP
Trigger: TGGCCCGAGCCACAGAGCCCACGGGTCCTGCCCAAT...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGATTGGGCAGGACCCGTaGGCTCTGTGGCTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRIGQDP*ALWLGP
Trigger: TGGCCCGAGCCACAGAGCCCACGGGTCCTGCCCAAT...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCATTGGGCAGGACCCGTaGGCTCTGTGGCTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVIGQDP*ALWLGP
Trigger: TGGCCCGAGCCACAGAGCCCACGGGTCCTGCCCAAT...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATTGCAGCCAGCCCATTaGGCAGGACCCGTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQILQPAH*AGPVGS
Trigger: AGAGCCCACGGGTCCTGCCCAATGGGCTGGCTGCAA...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCAAGGTCCCCACCGGCTaGTCCGAGGGCAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVKVPTG*SEGKDW
Trigger: CCAGTCCTTGCCCTCGGACCAGCCGGTGGGGACCTT...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATAAGGTCCCCACCGGCTaGTCCGAGGGCAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYKVPTG*SEGKDW
Trigger: CCAGTCCTTGCCCTCGGACCAGCCGGTGGGGACCTT...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCTTGCTGGTGCTGATCTaGGCGTGCCAGGTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVLLVLI*ACQVRG
Trigger: CCCCCGCACCTGGCACGCCCAGATCAGCACCAGCAA...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATTTGCTGGTGCTGATCTaGGCGTGCCAGGTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYLLVLI*ACQVRG
Trigger: CCCCCGCACCTGGCACGCCCAGATCAGCACCAGCAA...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGTTGCTGGTGCTGATCTaGGCGTGCCAGGTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRLLVLI*ACQVRG
Trigger: CCCCCGCACCTGGCACGCCCAGATCAGCACCAGCAA...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATACACCCTTGGCAACCGTaGGGTCCTGGGGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIHPWQP*GPGAGT
Trigger: TGTACCTGCCCCAGGACCCCACGGTTGCCAAGGGTG...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCAGCCGGGGGTCACCCTaGTCCACCACCATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVSRGSP*STTILS
Trigger: GCTCAGGATGGTGGTGGACCAGGGTGACCCCCGGCT...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGAGCCGGGGGTCACCCTaGTCCACCACCATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRSRGSP*STTILS
Trigger: GCTCAGGATGGTGGTGGACCAGGGTGACCCCCGGCT...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGTCATTCAGCCTGACTTaGGAGACGATGTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGSFSLT*ETMSVR
Trigger: CCTCACAGACATCGTCTCCCAAGTCAGGCTGAATGA...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGCAGCCTCACACACAGTaGCAATCTGCTCCTCATTCA +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGQPHTQ*QSAPHS
Trigger: TGAATGAGGAGCAGATTGCCACTGTGTGTGAGGCTG...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATGTCACTGAAGTACGGTaGCTCCCCATCTACCATCTC +
Preference number: 4 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYVTEVR*LPIYHL
Trigger: GAGATGGTAGATGGGGAGCCACCGTACTTCAGTGAC...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260404.8
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGTCACTGAAGTACGGTaGCTCCCCATCTACCATCTC +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPVTEVR*LPIYHL
Trigger: GAGATGGTAGATGGGGAGCCACCGTACTTCAGTGAC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCCTTCATGGCTTGCACTaGGGAGTCACTGAAGTACGG +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCLHGLH*GVTEVR
Trigger: CCGTACTTCAGTGACTCCCCAGTGCAAGCCATGAAG...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000560346.5
CDS-3UTR CCA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCGGAGCCTCTTCATaGCTTGCACTGGGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCPGASS*LALGSH
Trigger: GTGACTCCCCAGTGCAAGCCATGAAGAGGCTCCGGG...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260404.8
ENST00000560346.5
CDS-3UTR CCA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCGTTTTTCAGCTTGGGTaGGGGGCTGTCCCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCVFQLG*GAVPEP
Trigger: AGGCTCCGGGACAGCCCCCCACCCAAGCTGAAAAAC...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000260404.8
ENST00000560346.5
CDS-3UTR CCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGAGGCAGAGGGTGGGGCTaGGGCTTCACATTTCAATCT +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGGRGWG*GFTFQS
Trigger: AGATTGAAATGTGAAGCCCCAGCCCCACCCTCTGCC...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGGGCAGGTCCGGCCTaGCCCAGTAGGCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSGAGPA*PSRLKG
Trigger: GCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAGAGGCCAGGAACGCTaGCCTCTGCGTTTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCRGQER*PLRFLE
Trigger: TTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCCCTTTTCTACTGTGTTaGCTGCAGAGGCCAGGAACG +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCPFLLC*LQRPGT
Trigger: CGTTCCTGGCCTCTGCAGCCAACACAGTAGAAAAGG...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATCCTTTTCTACTGTGTTaGCTGCAGAGGCCAGGAACG +
Preference number: 4 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYPFLLC*LQRPGT
Trigger: CGTTCCTGGCCTCTGCAGCCAACACAGTAGAAAAGG...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCGTCTGCCCTCTGCAGTaGCCTAGGACACTAGTGGAC +
Preference number: 4 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPAVCPLQ*PRTLVD
Trigger: GTCCACTAGTGTCCTAGGCCACTGCAGAGGGCAGAC...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGACATGGACCACTCCACTaGCCAGGTAGACACAGGAGT +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGHGPLH*PGRHRS
Trigger: ACTCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATG...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGCTGCTGGCGGCTCCTaGCACATCAGGACGGGAGCA +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRAAGGS*HIRTGA
Trigger: TGCTCCCGTCCTGATGTGCCAGGAGCCGCCAGCAGC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS-3UTR TCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGAGCTGCACCCGTGTaGTTCGCGAAGGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRGAAPV*FAKGPP
Trigger: TGGTGGACCCTTCGCGAATCACACGGGTGCAGCTCC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATAAGTGGTCAGAGGGCTaGAGGTCCCCACCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYKWSEG*RSPPAG
Trigger: ACCAGCCGGTGGGGACCTTCAGCCCTCTGACCACTT...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCCCTGCAGGAACTCCATaGGCACCCACAGCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVPAGTP*APTAPR
Trigger: GCGAGGAGCTGTGGGTGCTCATGGAGTTCCTGCAGG...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGGGAGACGATGTCTGTaGGGGCTCCTCCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYGRRCL*GLLPAG
Trigger: TCCTGCAGGGAGGAGCCCTCACAGACATCGTCTCCC...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCACTGGGGAGACCTTGTaGGAGTTTTTCAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPTGETL*EFFSLG
Trigger: ACCCAAGCTGAAAAACTCTCACAAGGTCTCCCCAGT...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000542403.3
ENST00000560346.5
CDS-3UTR TCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGCTCCATTCTGTAAAGTaGGAGCACCTTCACCACCGA +
Preference number: 4 (lower is better)
Translates to: VEARPRKQVPSGQNLVGELHSVK*EHLHHR
Trigger: TCGGTGGTGAAGGTGCTCTCACTTTACAGAATGGAG...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCGAAACTGGCTGTGGGTaGCCTGGAGGGACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVETGCG*PGGTWA
Trigger: AGCCCAGGTCCCTCCAGGTCACCCACAGCCAGTTTC...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGAAGGGTCCAGACACCTaGAGTTCTTTCCTGGAATTC +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGKGPDT*SSFLEF
Trigger: GAATTCCAGGAAAGAACTTCAGGTGTCTGGACCCTT...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR GCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGTGGGCAGCGGGGTCCTaGGTTCTCCACTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLWAAGS*VLHCRL
Trigger: CAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCA...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCGAGGTGTGGACACGGTaGTGGAAGTTCTGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCEVWTR*WKFCGA
Trigger: AGCGCCACAGAACTTCCAGCACCGTGTCCACACCTC...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCGGAGGCCCACAAACTTaGCTTCTTTGGGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPGGPQT*LLWGRR
Trigger: CCTTCGACCCCAAAGAAGGCAAGTTTGTGGGCCTCC...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCTTCATGGGCTGGAGCTaGACCCGTGTGATTCGCGAA +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPFMGWS*TRVIRE
Trigger: TTCGCGAATCACACGGGTGCAGCTCCAGCCCATGAA...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCCACAGGCATCGCGCTaGCCCGCACCACTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYPQASR*PAPLSS
Trigger: TGAAGACAGTGGTGCGGGGCAGCGCGATGCCTGTGG...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATACATCTGCTTGTGGCCTaGTGGTGTGCCCCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIHLLVA*WCAPVA
Trigger: TGCAACGGGGGCACACCAGCAGGCCACAAGCAGATG...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATACAGGGACTGTGCCTTTaGAGCCAGCCCATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIQGLCL*SQPIGQ
Trigger: CTGCCCAATGGGCTGGCTGCAAAGGCACAGTCCCTG...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGGGCCCAGGGACTGTaGCTTTGCAGCCAGCCCATT +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRGAQGL*LCSQPI
Trigger: AATGGGCTGGCTGCAAAGGCACAGTCCCTGGGCCCC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGGGGCCCAGGGACTGTaGCTTTGCAGCCAGCCCATT +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYGAQGL*LCSQPI
Trigger: AATGGGCTGGCTGCAAAGGCACAGTCCCTGGGCCCC...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCGGGGCCCAGGGACTGTaGCTTTGCAGCCAGCCCATT +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVGAQGL*LCSQPI
Trigger: AATGGGCTGGCTGCAAAGGCACAGTCCCTGGGCCCC...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGACAGTGGACAGGAACATaGTTCGGAATAGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGQWTGT*FGIACA
Trigger: AGCGCAGGCTATTCCGAAGCATGTTCCTGTCCACTG...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGTGGAGGGCCTGGCTTaGTGCTGCTTGGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLVEGLA*CCLEGL
Trigger: CAGCCCCTCCAAGCAGCAGCAAGCCAGGCCCTCCAC...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCAGCTCCCTGCGCTGCTaGTTCCTGAGGTCCATCATC +
Preference number: 4 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCSSLRC*FLRSII
Trigger: GATGATGGACCTCAGGAAGCAGCAGCGCAGGGAGCT...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCCACACAGTGGCAATCTaGTCCTCATTCAGCCTGACT +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCHTVAI*SSFSLT
Trigger: AGTCAGGCTGAATGAGGAGCAGATTGCCACTGTGTG...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCACACAGTGGCAATCTaGTCCTCATTCAGCCTGACT +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPHTVAI*SSFSLT
Trigger: AGTCAGGCTGAATGAGGAGCAGATTGCCACTGTGTG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR GCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGAGGCAGGCAAGTCCTaGCGGCAGGCTGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSEAGKS*RQAGCP
Trigger: TGGGCAGCCAGCCTGCCGGCAGGACTTGCCTGCCTC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCCTGACCACCATATCTaGTATTGCACTCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPPDHHI*YCTLPA
Trigger: AGCAGGCAGAGTGCAATAGCAGATATGGTGGTCAGG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGTCCTCCGCAGGCCGTaGCTGCTCCTTCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSVLRRP*LLLLGS
Trigger: GCTGCCCAGAAGGAGCAGCCACGGCCTGCGGAGGAC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGCAAACTTGCCTTCTTTaGGGTCGAAGGAGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: VEARPRKQVPSGQNLVGEQTCLL*GRRRCG
Trigger: TCCACACCTCCTTCGACCCCAAAGAAGGCAAGTTTG...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCAAACTTGCCTTCTTTaGGGTCGAAGGAGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPQTCLL*GRRRCG
Trigger: TCCACACCTCCTTCGACCCCAAAGAAGGCAAGTTTG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGAACTGTCTTCATGGGCTaGAGCTGCACCCGTGTGATT +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGTVFMG*SCTRVI
Trigger: AATCACACGGGTGCAGCTCCAGCCCATGAAGACAGT...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATACTGGAGGTACATGTCTaGGTCGGTGGCCCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQILEVHV*VGGPVL
Trigger: GAGCACTGGGCCACCGACCCAGACATGTACCTCCAG...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCCTGCTTGTGGCCTGCTaGTGTGCCCCCGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVLLVAC*CAPVAA
Trigger: AGCTGCAACGGGGGCACACCAGCAGGCCACAAGCAG...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGCTGCTTGTGGCCTGCTaGTGTGCCCCCGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRLLVAC*CAPVAA
Trigger: AGCTGCAACGGGGGCACACCAGCAGGCCACAAGCAG...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCGTCGGAAAGAGGAGTTaGGCTTGCTCTGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPAVGKRS*ACSVVE
Trigger: CTCCACCACAGAGCAAGCCCAACTCCTCTTTCCGAC...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCACTTCTGGGGGCTGCTaGTATCCGAAGTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPATSGGC*YPKWSE
Trigger: CTCTGACCACTTCGGATACCAGCAGCCCCCAGAAGT...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAGTGCGGAGGGACTTCTaGGGGCTGCTGGTATCCGAA +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIVRRDF*GLLVSE
Trigger: TTCGGATACCAGCAGCCCCCAGAAGTCCCTCCGCAC...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGTTGCTGGTGCTGATCTaGGCGTGCCAGGTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLLLVLI*ACQVRG
Trigger: CCCCCGCACCTGGCACGCCCAGATCAGCACCAGCAA...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCGCAACCGTGGGGTCCTaGGGCAGGTACAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVATVGS*GRYRLL
Trigger: CAGCAACCTGTACCTGCCCCAGGACCCCACGGTTGC...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCACCCTTGGCAACCGTaGGGTCCTGGGGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYHPWQP*GPGAGT
Trigger: TGTACCTGCCCCAGGACCCCACGGTTGCCAAGGGTG...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTCAGCCAGGGCACCCTTaGCAACCGTGGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSQPGHP*QPWGPG
Trigger: CCCAGGACCCCACGGTTGCCAAGGGTGCCCTGGCTG...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGAGCCGGGGGTCACCCTaGTCCACCACCATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLSRGSP*STTILS
Trigger: GCTCAGGATGGTGGTGGACCAGGGTGACCCCCGGCT...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGATCTTGACGGCCACCTaGCGGCCCGAGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRILTAT*RPECFS
Trigger: GGAGAAGCACTCGGGCCGCCAGGTGGCCGTCAAGAT...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATTCATTCAGCCTGACTTaGGAGACGATGTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYSFSLT*ETMSVR
Trigger: CCTCACAGACATCGTCTCCCAAGTCAGGCTGAATGA...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGCTGTGGCTCTCTCTTaGGGGTCCCGCACCAGCATC +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRAVALS*GSRTSI
Trigger: GATGCTGGTGCGGGACCCCCAAGAGAGAGCCACAGC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTGGCAGGCATACTTaGGGTGGGCTCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRGGRHT*GGLSRW
Trigger: CCACCTGCTGAGCCCACCCCAAGTATGCCTGCCACC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGCCTGTGGGCGTAGGTaGCAGGCATACTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYACGRR*QAYLGW
Trigger: CCACCCCAAGTATGCCTGCCACCTACGCCCACAGGC...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGACCTTTTCTACTGTGTTaGCTGCAGAGGCCAGGAACG +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGPFLLC*LQRPGT
Trigger: CGTTCCTGGCCTCTGCAGCCAACACAGTAGAAAAGG...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCCCTGGGCTGTCAAGGTaGCTTTCCTCCCCTTACACA +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPPGLSR*LSSPYT
Trigger: TGTGTAAGGGGAGGAAAGCCACCTTGACAGCCCAGG...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGACAGCAGCCCTGAAGTaGGGCAGGGCCGAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLTAALK*GRAEED
Trigger: GTCCTCCTCGGCCCTGCCCCACTTCAGGGCTGCTGT...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCATATCTTTAGGGGGTaGCAGCAGACTCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPHIFRG*QQTHSK
Trigger: CTTGCTGTGAGTCTGCTGCCACCCCCTAAAGATATG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCCTCTCTCTTAGGCGCTaGGGAGAGGGAAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVLSLRR*GEGRPG
Trigger: CCCAGGTCTTCCCTCTCCTCAGCGCCTAAGAGAGAG...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGTTGGAGCTGATGACTaGCAACTTCTGGATGTCGTT +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPVGADD*QLLDVV
Trigger: AACGACATCCAGAAGTTGTCAGTCATCAGCTCCAAC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR TCA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGTTGGAGCTGATGACTaGCAACTTCTGGATGTCGTT +
Preference number: 4 (lower is better)
Translates to: GCRGQERWPLRFLEISLCVGADD*QLLDVV
Trigger: AACGACATCCAGAAGTTGTCAGTCATCAGCTCCAAC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCGCTCCTCATTCAGCCTaGCTTGGGAGACGATGTCTG +
Preference number: 4 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCAPHSA*LGRRCL
Trigger: CAGACATCGTCTCCCAAGTCAGGCTGAATGAGGAGC...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGCACTGGGGAGTCACTaGAGTACGGTGGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRALGSH*STVAPH
Trigger: ATGGGGAGCCACCGTACTTCAGTGACTCCCCAGTGC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGCACTGGGGAGTCACTaGAGTACGGTGGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYALGSH*STVAPH
Trigger: ATGGGGAGCCACCGTACTTCAGTGACTCCCCAGTGC...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGATCCCAGATAGGGTTCTaGAGAGAACAATGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGSQIGF*REQWVP
Trigger: AGGGACCCATTGTTCTCTTCAGAACCCTATCTGGGA...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAGGGACTGTGCCTTTaGAGCCAGCCCATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYQGLCL*SQPIGQ
Trigger: CTGCCCAATGGGCTGGCTGCAAAGGCACAGTCCCTG...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTAGGCAGGCACCCAGCTaGAGACAGCGCTGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSRQAPS*RQRCEA
Trigger: TGCCTCGCAGCGCTGTCTGCAGCTGGGTGCCTGCCT...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAGCAGCCTTCATTCCATaGCTATTGGTGCCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIAAFIP*LLVPVG
Trigger: CCCCACGGGCACCAATAGGCATGGAATGAAGGCTGC...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGTGGAGGGCCTGGCTTaGTGCTGCTTGGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSVEGLA*CCLEGL
Trigger: CAGCCCCTCCAAGCAGCAGCAAGCCAGGCCCTCCAC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAGGGACTTCTGGGGGCTaGTGGTATCCGAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIGTSGG*WYPKWS
Trigger: TGACCACTTCGGATACCAGCAGCCCCCAGAAGTCCC...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTCTGTGGCCGGGGCTGTaGGGAGGGACTTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVLWPGL*GGTSGG
Trigger: GCCCCCAGAAGTCCCTCCGCACAGCCCCGGCCACAG...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAAGCTCCCTGCGCTGCTaGTTCCTGAGGTCCATCATC +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQISSLRC*FLRSII
Trigger: GATGATGGACCTCAGGAAGCAGCAGCGCAGGGAGCT...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCAGCAGCTCCCTGCGCTaGTGCTTCCTGAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVSSSLR*CFLRSI
Trigger: GATGGACCTCAGGAAGCAGCAGCGCAGGGAGCTGCT...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATAGCAGCTCCCTGCGCTaGTGCTTCCTGAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYSSSLR*CFLRSI
Trigger: GATGGACCTCAGGAAGCAGCAGCGCAGGGAGCTGCT...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCCGAGAGCTTCACCCTaGCATCGAGGGTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYPRASP*HRGSAG
Trigger: TCCTGCTGACCCTCGATGGCAGGGTGAAGCTCTCGG...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCCCGAGAGCTTCACCCTaGCATCGAGGGTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVPRASP*HRGSAG
Trigger: TCCTGCTGACCCTCGATGGCAGGGTGAAGCTCTCGG...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCTGTACAGGTGGGACTaGACCTTCAGGACATCAGAC +
Preference number: 4 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPALYRWD*TFRTSD
Trigger: GTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAG...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCAGGAGAGGGAAGACCTaGGACCTTGCTGGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVRRGKT*DLAGPV
Trigger: GACTGGCCCAGCAAGGTCCCAGGTCTTCCCTCTCCT...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCGCACCACTGTCTTCATaGGCTGGAGCTGCACCCGTG +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVAPLSS*AGAAPV
Trigger: CACGGGTGCAGCTCCAGCCCATGAAGACAGTGGTGC...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATACATGTCTGGGTCGGTaGCCCAGTGCTCATCCCCCA +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYTCLGR*PSAHPP
Trigger: TGGGGGATGAGCACTGGGCCACCGACCCAGACATGT...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGCTGGAGGTACATGTCTaGGTCGGTGGCCCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRLEVHV*VGGPVL
Trigger: GAGCACTGGGCCACCGACCCAGACATGTACCTCCAG...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAGTGCGCTCAGACTaGGGGCTCTGGAGGTACATG +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQISVRSD*GLWRYM
Trigger: CATGTACCTCCAGAGCCCCCAGTCTGAGCGCACTGA...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTCACGGCATCTGCTTGTaGCCTGCTGGTGTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSHGICL*PAGVPP
Trigger: CGGGGGCACACCAGCAGGCCACAAGCAGATGCCGTG...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGCAACCGTGGGGTCCTaGGGCAGGTACAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLATVGS*GRYRLL
Trigger: CAGCAACCTGTACCTGCCCCAGGACCCCACGGTTGC...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGCACCCTTGGCAACCGTaGGGTCCTGGGGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLHPWQP*GPGAGT
Trigger: TGTACCTGCCCCAGGACCCCACGGTTGCCAAGGGTG...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGATCTTGACGGCCACCTaGCGGCCCGAGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLILTAT*RPECFS
Trigger: GGAGAAGCACTCGGGCCGCCAGGTGGCCGTCAAGAT...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGACAGCCTCACACACAGTaGCAATCTGCTCCTCATTCA +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGQPHTQ*QSAPHS
Trigger: TGAATGAGGAGCAGATTGCCACTGTGTGTGAGGCTG...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGAGATATCCACCTCAGTaGCATACAAAGACCTGGAGA +
Preference number: 4 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGRYPPQ*HTKTWR
Trigger: TCTCCAGGTCTTTGTATGCCACTGAGGTGGATATCT...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGCCCGGAGCCTCTTCATaGCTTGCACTGGGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRPGASS*LALGSH
Trigger: GTGACTCCCCAGTGCAAGCCATGAAGAGGCTCCGGG...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGTTTTTCAGCTTGGGTaGGGGGCTGTCCCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYVFQLG*GAVPEP
Trigger: AGGCTCCGGGACAGCCCCCCACCCAAGCTGAAAAAC...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCGAAGTCTCGCAGCACTaGGGAGACCTTGTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPAEVSQH*GDLVRV
Trigger: AACTCTCACAAGGTCTCCCCAGTGCTGCGAGACTTC...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260404.8
ENST00000560346.5
CDS-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGCTGTGGCTCTCTCTTaGGGGTCCCGCACCAGCATC +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLAVALS*GSRTSI
Trigger: GATGCTGGTGCGGGACCCCCAAGAGAGAGCCACAGC...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGCAGGCATACTTGGGGTaGGCTCAGCAGGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRQAYLG*AQQVEV
Trigger: GACCTCCACCTGCTGAGCCCACCCCAAGTATGCCTG...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAGTCTGCCCTCTGCAGTaGCCTAGGACACTAGTGGAC +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIVCPLQ*PRTLVD
Trigger: GTCCACTAGTGTCCTAGGCCACTGCAGAGGGCAGAC...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGCCATTCACAGTTCTaGGCGGGGAGGGGCTGTACA +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRGHSQF*AGRGCT
Trigger: TGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATTGGCTGTGGGTGACCTaGAGGGACCTGGGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYWLWVT*RDLGCQ
Trigger: TTGACAGCCCAGGTCCCTCCAGGTCACCCACAGCCA...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCACAGGAGTGGAGAGGTaGAAGCCAGGCCAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCTGVER*KPGQES
Trigger: GCTTTCTTGGCCTGGCTTCCACCTCTCCACTCCTGT...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATTTACATTCCTGTCTCTaGCCCTCACGATGCACAGTA +
Preference number: 4 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYLHSCL*PSRCTV
Trigger: TACTGTGCATCGTGAGGGCCAGAGACAGGAATGTAA...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCATGGAAACCCGGAGGTaGTTCGCCTTCTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCMETRR*FAFSPR
Trigger: TCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCAT...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGATGGTTTGCACACATaGATGCCTGTGACCTTGACA +
Preference number: 4 (lower is better)
Translates to: DACDLDMMETRRWFAFSPDGLHT*MPVTLT
Trigger: TGTCAAGGTCACAGGCATCCATGTGTGCAAACCATC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGCACCTGGATGGCTGCTaGCGGCTCCTGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLHLDGC*RLLAHQ
Trigger: CTGATGTGCCAGGAGCCGCCAGCAGCCATCCAGGTG...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS-3UTR TCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGAGCTGCACCCGTGTaGTTCGCGAAGGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSGAAPV*FAKGPP
Trigger: TGGTGGACCCTTCGCGAATCACACGGGTGCAGCTCC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAACTTCTGGATGTCGTTaGGCAGCCCCGAGATGTAGC +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQITSGCR*AAPRCS
Trigger: GCTACATCTCGGGGCTGCTCAACGACATCCAGAAGT...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTTGCCCCCGTTGCAGCTaGGGTAGAGGCCGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVCPRCS*GRGRGG
Trigger: ACCCCCACGGCCTCTACCTCAGCTGCAACGGGGGCA...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTAAGTGGTCAGAGGGCTaGAGGTCCCCACCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSKWSEG*RSPPAG
Trigger: ACCAGCCGGTGGGGACCTTCAGCCCTCTGACCACTT...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGGAGACGATGTCTGTaGGGGCTCCTCCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSGRRCL*GLLPAG
Trigger: TCCTGCAGGGAGGAGCCCTCACAGACATCGTCTCCC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGCACTGGGGAGTCACTaGAGTACGGTGGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLALGSH*STVAPH
Trigger: ATGGGGAGCCACCGTACTTCAGTGACTCCCCAGTGC...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCTCCCAGATAGGGTTCTaGAGAGAACAATGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPASQIGF*REQWVP
Trigger: AGGGACCCATTGTTCTCTTCAGAACCCTATCTGGGA...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAACTCCCTGGGCATCTTaGTGTGTCTCTGTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQITPWAS*CVSVLC
Trigger: GCACAGGACAGAGACACAGCAAGATGCCCAGGGAGT...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260404.8
CDS-3UTR GCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCCACTGCAGGCTGGTaGTTGTCTCTAGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQISTAGW*LSLAQE
Trigger: TTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGA...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGAGGTGTGGACACGGTaGTGGAAGTTCTGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYEVWTR*WKFCGA
Trigger: AGCGCCACAGAACTTCCAGCACCGTGTCCACACCTC...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGAGGTGTGGACACGGTaGTGGAAGTTCTGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISREVWTR*WKFCGA
Trigger: AGCGCCACAGAACTTCCAGCACCGTGTCCACACCTC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGGGCCCAGGGACTGTaGCTTTGCAGCCAGCCCATT +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSGAQGL*LCSQPI
Trigger: AATGGGCTGGCTGCAAAGGCACAGTCCCTGGGCCCC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGCAGCCTTCATTCCATaGCTATTGGTGCCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYAAFIP*LLVPVG
Trigger: CCCCACGGGCACCAATAGGCATGGAATGAAGGCTGC...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGAAGAGGAGTTGGGCTTaGTCTGTGGTGGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRKRSWA*SVVEGL
Trigger: CAGGCCCTCCACCACAGAGCAAGCCCAACTCCTCTT...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATAAGAGGAGTTGGGCTTaGTCTGTGGTGGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYKRSWA*SVVEGL
Trigger: CAGGCCCTCCACCACAGAGCAAGCCCAACTCCTCTT...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGAGCTCCCTGCGCTGCTaGTTCCTGAGGTCCATCATC +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRSSLRC*FLRSII
Trigger: GATGATGGACCTCAGGAAGCAGCAGCGCAGGGAGCT...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGCCGAGAGCTTCACCCTaGCATCGAGGGTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLPRASP*HRGSAG
Trigger: TCCTGCTGACCCTCGATGGCAGGGTGAAGCTCTCGG...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTTGCCGGCAGGCTGGCTaGCCAGTGTGCCCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVCRQAG*PVCPAC
Trigger: ACAGGCAGGGCACACTGGGCAGCCAGCCTGCCGGCA...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCTGACCACCATATCTaGTATTGCACTCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPAPDHHI*YCTLPA
Trigger: AGCAGGCAGAGTGCAATAGCAGATATGGTGGTCAGG...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGAAGCGGCACTCCCTaGGCATCTTGCTGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRGSGTP*ASCCVS
Trigger: AGAGACACAGCAAGATGCCCAGGGAGTGCCGCTTCC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260404.8
CDS-3UTR CCA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTGTCCTCCGCAGGCCGTaGCTGCTCCTTCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVVLRRP*LLLLGS
Trigger: GCTGCCCAGAAGGAGCAGCCACGGCCTGCGGAGGAC...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCTCAGTGCGCTCAGACTaGGGGCTCTGGAGGTACATG +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVSVRSD*GLWRYM
Trigger: CATGTACCTCCAGAGCCCCCAGTCTGAGCGCACTGA...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATTCAGTGCGCTCAGACTaGGGGCTCTGGAGGTACATG +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYSVRSD*GLWRYM
Trigger: CATGTACCTCCAGAGCCCCCAGTCTGAGCGCACTGA...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTCTGCTTGTGGCCTGCTaGTGTGCCCCCGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSLLVAC*CAPVAA
Trigger: AGCTGCAACGGGGGCACACCAGCAGGCCACAAGCAG...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGGGCTGTGGCAGCAGTaGACAGGAACATGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYGLWQQ*TGTCFG
Trigger: TCCGAAGCATGTTCCTGTCCACTGCTGCCACAGCCC...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGTTGGGCTTGCTCTGTaGTGGAGGGCCTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLVGLAL*WRAWLA
Trigger: AGCAAGCCAGGCCCTCCACCACAGAGCAAGCCCAAC...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAGTCGGAAAGAGGAGTTaGGCTTGCTCTGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIVGKRS*ACSVVE
Trigger: CTCCACCACAGAGCAAGCCCAACTCCTCTTTCCGAC...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGTGCGGAGGGACTTCTaGGGGCTGCTGGTATCCGAA +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLVRRDF*GLLVSE
Trigger: TTCGGATACCAGCAGCCCCCAGAAGTCCCTCCGCAC...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTCAGCCAGGGCACCCTTaGCAACCGTGGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVQPGHP*QPWGPG
Trigger: CCCAGGACCCCACGGTTGCCAAGGGTGCCCTGGCTG...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTATCTTGACGGCCACCTaGCGGCCCGAGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSILTAT*RPECFS
Trigger: GGAGAAGCACTCGGGCCGCCAGGTGGCCGTCAAGAT...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGTTTTTCAGCTTGGGTaGGGGGCTGTCCCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLVFQLG*GAVPEP
Trigger: AGGCTCCGGGACAGCCCCCCACCCAAGCTGAAAAAC...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCTGGTCTAGGAGCTCCTaGGCTGTGGCTCTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVWSRSS*AVALSW
Trigger: CCAAGAGAGAGCCACAGCCCAGGAGCTCCTAGACCA...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGTGGTCTAGGAGCTCCTaGGCTGTGGCTCTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRWSRSS*AVALSW
Trigger: CCAAGAGAGAGCCACAGCCCAGGAGCTCCTAGACCA...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGCAGGCATACTTGGGGTaGGCTCAGCAGGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLQAYLG*AQQVEV
Trigger: GACCTCCACCTGCTGAGCCCACCCCAAGTATGCCTG...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGTGGCAGGCATACTTaGGGTGGGCTCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSGGRHT*GGLSRW
Trigger: CCACCTGCTGAGCCCACCCCAAGTATGCCTGCCACC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGATTACATTCCTGTCTCTaGCCCTCACGATGCACAGTA +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGLHSCL*PSRCTV
Trigger: TACTGTGCATCGTGAGGGCCAGAGACAGGAATGTAA...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGAGATGGTTTGCACACATaGATGCCTGTGACCTTGACA +
Preference number: 4 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGDGLHT*MPVTLT
Trigger: TGTCAAGGTCACAGGCATCCATGTGTGCAAACCATC...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGTCTGTGGAGGCAGCTaGGGCAGATGGTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYVCGGS*GRWFAH
Trigger: GTGTGCAAACCATCTGCCCCAGCTGCCTCCACAGAC...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTCTCTCTCTTAGGCGCTaGGGAGAGGGAAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSLSLRR*GEGRPG
Trigger: CCCAGGTCTTCCCTCTCCTCAGCGCCTAAGAGAGAG...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCACTTCTGGATGTCGTTaGGCAGCCCCGAGATGTAGC +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVTSGCR*AAPRCS
Trigger: GCTACATCTCGGGGCTGCTCAACGACATCCAGAAGT...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATACTTCTGGATGTCGTTaGGCAGCCCCGAGATGTAGC +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYTSGCR*AAPRCS
Trigger: GCTACATCTCGGGGCTGCTCAACGACATCCAGAAGT...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGCTCCTCATTCAGCCTaGCTTGGGAGACGATGTCTG +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRAPHSA*LGRRCL
Trigger: CAGACATCGTCTCCCAAGTCAGGCTGAATGAGGAGC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCGCTCCTCATTCAGCCTaGCTTGGGAGACGATGTCTG +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVAPHSA*LGRRCL
Trigger: CAGACATCGTCTCCCAAGTCAGGCTGAATGAGGAGC...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCACGTCTTTGCTGATCTaGGCACAGAATCCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCTSLLI*AQNPKS
Trigger: GGACTTCGGATTCTGTGCTCAGATCAGCAAAGACGT...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCTCCATTCTGTAAAGTaGGAGCACCTTCACCACCGA +
Preference number: 4 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCLHSVK*EHLHHR
Trigger: TCGGTGGTGAAGGTGCTCTCACTTTACAGAATGGAG...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGCCTGTGACCTTGACATaGTGGAAACCCGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRPVTLT*WKPGGG
Trigger: ACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGG...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCTCCACTGCAGGCTGGTaGTTGTCTCTAGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVSTAGW*LSLAQE
Trigger: TTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGA...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGTCCTGCGTTCTCCACTaGAGGCTGGTGCTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRSCVLH*RLVLVS
Trigger: AGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGA...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATTCCTGCGTTCTCCACTaGAGGCTGGTGCTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYSCVLH*RLVLVS
Trigger: AGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGA...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGAGGTGTGGACACGGTaGTGGAAGTTCTGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLEVWTR*WKFCGA
Trigger: AGCGCCACAGAACTTCCAGCACCGTGTCCACACCTC...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGGAGGCCCACAAACTTaGCTTCTTTGGGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYGGPQT*LLWGRR
Trigger: CCTTCGACCCCAAAGAAGGCAAGTTTGTGGGCCTCC...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGAGGCCCACAAACTTaGCTTCTTTGGGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRGGPQT*LLWGRR
Trigger: CCTTCGACCCCAAAGAAGGCAAGTTTGTGGGCCTCC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGCAGCCTTCATTCCATaGCTATTGGTGCCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLAAFIP*LLVPVG
Trigger: CCCCACGGGCACCAATAGGCATGGAATGAAGGCTGC...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGCCTCCTCAGAGCCATaGTTGGCAGCCTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYASSEP*LAAFIP
Trigger: TGGAATGAAGGCTGCCAAGCATGGCTCTGAGGAGGC...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGTGCTTCGGAATAGCCTaGGCTTCAGGCTGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLCFGIA*ASGCSP
Trigger: GGGAGAGCAGCCTGAAGCGCAGGCTATTCCGAAGCA...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCACACAGTGGCAATCTaGTCCTCATTCAGCCTGACT +
Preference number: 4 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCHTVAI*SSFSLT
Trigger: AGTCAGGCTGAATGAGGAGCAGATTGCCACTGTGTG...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGATTAGAAATATCCCTGTaGAAATATCAAGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRLEISL*KYQGVI
Trigger: GATGACCCCTTGATATTTGCACAGGGATATTTCTAA...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGGGCGGGACTCAGGTaGAGCTCCAAGTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSGAGLR*SSKFPA
Trigger: AGCTGGAAACTTGGAGCTGCACCTGAGTCCCGCCCC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCCAGCTCGGACAAGACTaGCCTTCTGTCCCAACACCT +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVQLGQD*PSVPTP
Trigger: AGGTGTTGGGACAGAAGGGCAGTCTTGTCCGAGCTG...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGCCTCGCTCTCCAAATaGCACTCCGACCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSASLSK*HSDPRS
Trigger: GCTTCTGGGGTCGGAGTGGCATTTGGAGAGCGAGGC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATTTCTCCACTGCAGGCTaGTGCTTGTCTCTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYFSTAG*CLSLAQ
Trigger: CTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAA...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTACTCCTCACCCGCACTaGGCCTCTCTCTTAGGCGCT +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSTPHPH*ASLLGA
Trigger: AGCGCCTAAGAGAGAGGCCCAGTGCGGGTGAGGAGT...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGTTTTCTTGCGGAACATaGTGCCTTCCGGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRFSCGT*CLPAPS
Trigger: GGAAGGCGCCGGAAGGCACCATGTTCCGCAAGAAAA...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTACATGTCTGGGTCGGTaGCCCAGTGCTCATCCCCCA +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSTCLGR*PSAHPP
Trigger: TGGGGGATGAGCACTGGGCCACCGACCCAGACATGT...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGTCAGACTGGGGGCTCTaGAGGTACATGTCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLSDWGL*RYMSGS
Trigger: CGACCCAGACATGTACCTCCAGAGCCCCCAGTCTGA...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCCTCAGAGCCATGCTTaGCAGCCTTCATTCCATGCC +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYPQSHA*QPSFHA
Trigger: GGCATGGAATGAAGGCTGCCAAGCATGGCTCTGAGG...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGTTGGGCTTGCTCTGTaGTGGAGGGCCTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSVGLAL*WRAWLA
Trigger: AGCAAGCCAGGCCCTCCACCACAGAGCAAGCCCAAC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCGTCGGAAAGAGGAGTTaGGCTTGCTCTGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVVGKRS*ACSVVE
Trigger: CTCCACCACAGAGCAAGCCCAACTCCTCTTTCCGAC...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATACTTCTGGGGGCTGCTaGTATCCGAAGTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYTSGGC*YPKWSE
Trigger: CTCTGACCACTTCGGATACCAGCAGCCCCCAGAAGT...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGACTTCTGGGGGCTGCTaGTATCCGAAGTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRTSGGC*YPKWSE
Trigger: CTCTGACCACTTCGGATACCAGCAGCCCCCAGAAGT...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGTGCGGAGGGACTTCTaGGGGCTGCTGGTATCCGAA +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSVRRDF*GLLVSE
Trigger: TTCGGATACCAGCAGCCCCCAGAAGTCCCTCCGCAC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTCCCGGAGCCTCTTCATaGCTTGCACTGGGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSPGASS*LALGSH
Trigger: GTGACTCCCCAGTGCAAGCCATGAAGAGGCTCCGGG...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAGAAGTCTCGCAGCACTaGGGAGACCTTGTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIEVSQH*GDLVRV
Trigger: AACTCTCACAAGGTCTCCCCAGTGCTGCGAGACTTC...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGGTGGGCTCAGCAGGTaGAGGTCTGCTTTCGGTAGA +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLGGLSR*RSAFGR
Trigger: TCTACCGAAAGCAGACCTCCACCTGCTGAGCCCACC...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTCAGGCATACTTGGGGTaGGCTCAGCAGGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSQAYLG*AQQVEV
Trigger: GACCTCCACCTGCTGAGCCCACCCCAAGTATGCCTG...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGATAAAAACCACCCCGTaGCCCTCTCGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRIKTTP*PSRDSR
Trigger: CCTCGAGTCTCGAGAGGGCCACGGGGTGGTTTTTAT...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCATAAAAACCACCCCGTaGCCCTCTCGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVIKTTP*PSRDSR
Trigger: CCTCGAGTCTCGAGAGGGCCACGGGGTGGTTTTTAT...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCCCTGGGCTGTCAAGGTaGCTTTCCTCCCCTTACACA +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVPGLSR*LSSPYT
Trigger: TGTGTAAGGGGAGGAAAGCCACCTTGACAGCCCAGG...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGCATGGACCACTCCACTaGCCAGGTAGACACAGGAGT +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRHGPLH*PGRHRS
Trigger: ACTCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATG...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTACAGCAGCCCTGAAGTaGGGCAGGGCCGAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVTAALK*GRAEED
Trigger: GTCCTCCTCGGCCCTGCCCCACTTCAGGGCTGCTGT...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTCCTCCCCCACCTGCCTaGACCGTGGCTGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVPPPPA*TVAVSR
Trigger: TCTGGAGACAGCCACGGTCCAGGCAGGTGGGGGAGG...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS-3UTR TCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGAAGTTCTGTGGCGCTaGGATCTCAGGGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISREVLWR*DLRAFL
Trigger: AAGAAACGCCCTGAGATCTCAGCGCCACAGAACTTC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAACTGGGGAGACCTTGTaGGAGTTTTTCAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQITGETL*EFFSLG
Trigger: ACCCAAGCTGAAAAACTCTCACAAGGTCTCCCCAGT...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCAAGGGTCCAGACACCTaGAGTTCTTTCCTGGAATTC +
Preference number: 4 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCKGPDT*SSFLEF
Trigger: GAATTCCAGGAAAGAACTTCAGGTGTCTGGACCCTT...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGTTCATGGGCTGGAGCTaGACCCGTGTGATTCGCGAA +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLFMGWS*TRVIRE
Trigger: TTCGCGAATCACACGGGTGCAGCTCCAGCCCATGAA...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTTGCTTCGGAATAGCCTaGGCTTCAGGCTGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSCFGIA*ASGCSP
Trigger: GGGAGAGCAGCCTGAAGCGCAGGCTATTCCGAAGCA...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGCAGTGGACAGGAACATaGTTCGGAATAGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRQWTGT*FGIACA
Trigger: AGCGCAGGCTATTCCGAAGCATGTTCCTGTCCACTG...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAGTGGACAGGAACATaGTTCGGAATAGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYQWTGT*FGIACA
Trigger: AGCGCAGGCTATTCCGAAGCATGTTCCTGTCCACTG...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGGACTTCTGGGGGCTaGTGGTATCCGAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSGTSGG*WYPKWS
Trigger: TGACCACTTCGGATACCAGCAGCCCCCAGAAGTCCC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTAGCTCCCTGCGCTGCTaGTTCCTGAGGTCCATCATC +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSSSLRC*FLRSII
Trigger: GATGATGGACCTCAGGAAGCAGCAGCGCAGGGAGCT...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTTCAGGTAGCCCTGTCTaGAGCAGGAAGGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSSGSPV*SRKGWS
Trigger: AGACCACCCCTTCCTGCTGCAGACAGGGCTACCTGA...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATACACCATATCTGCTATTaGACTCTGCCTGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIHHICY*TLPAAT
Trigger: TGTGGCAGCAGGCAGAGTGCAATAGCAGATATGGTG...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGTGTGGACACGGTGCTaGAAGTTCTGTGGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSVWTRC*KFCGAE
Trigger: CTCAGCGCCACAGAACTTCCAGCACCGTGTCCACAC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCACTGTCTTCATGGGCTaGAGCTGCACCCGTGTGATT +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVTVFMG*SCTRVI
Trigger: AATCACACGGGTGCAGCTCCAGCCCATGAAGACAGT...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGACTGTCTTCATGGGCTaGAGCTGCACCCGTGTGATT +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRTVFMG*SCTRVI
Trigger: AATCACACGGGTGCAGCTCCAGCCCATGAAGACAGT...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAATGACTGACAACTTCTaGATGTCGTTGAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIMTDNF*MSLSSP
Trigger: GGGGCTGCTCAACGACATCCAGAAGTTGTCAGTCAT...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTGCAACCGTGGGGTCCTaGGGCAGGTACAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVATVGS*GRYRLL
Trigger: CAGCAACCTGTACCTGCCCCAGGACCCCACGGTTGC...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATACAGCCTCACACACAGTaGCAATCTGCTCCTCATTCA +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIQPHTQ*QSAPHS
Trigger: TGAATGAGGAGCAGATTGCCACTGTGTGTGAGGCTG...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGTCACTGAAGTACGGTaGCTCCCCATCTACCATCTC +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYVTEVR*LPIYHL
Trigger: GAGATGGTAGATGGGGAGCCACCGTACTTCAGTGAC...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCGTCACTGAAGTACGGTaGCTCCCCATCTACCATCTC +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVVTEVR*LPIYHL
Trigger: GAGATGGTAGATGGGGAGCCACCGTACTTCAGTGAC...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGAGGGGCTGTACAGGTaGGACTGCACCTTCAGGACA +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSEGLYR*DCTFRT
Trigger: TGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGCAGCTGGGGCAGATaGTTTGCACACATGGATGCC +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSGSWGR*FAHMDA
Trigger: GGCATCCATGTGTGCAAACCATCTGCCCCAGCTGCC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGTCTGTGGAGGCAGCTaGGGCAGATGGTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSVCGGS*GRWFAH
Trigger: GTGTGCAAACCATCTGCCCCAGCTGCCTCCACAGAC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTCACCTGCCTGGACCGTaGCTGTCTCCAGAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVHLPGP*LSPECG
Trigger: GCCACACTCTGGAGACAGCCACGGTCCAGGCAGGTG...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS-3UTR TCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTACTTCTGGATGTCGTTaGGCAGCCCCGAGATGTAGC +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSTSGCR*AAPRCS
Trigger: GCTACATCTCGGGGCTGCTCAACGACATCCAGAAGT...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAGTTGGAGCTGATGACTaGCAACTTCTGGATGTCGTT +
Preference number: 4 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIVGADD*QLLDVV
Trigger: AACGACATCCAGAAGTTGTCAGTCATCAGCTCCAAC...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGACGTCTTTGCTGATCTaGGCACAGAATCCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRTSLLI*AQNPKS
Trigger: GGACTTCGGATTCTGTGCTCAGATCAGCAAAGACGT...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCACGTCTTTGCTGATCTaGGCACAGAATCCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVTSLLI*AQNPKS
Trigger: GGACTTCGGATTCTGTGCTCAGATCAGCAAAGACGT...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCCTCCATTCTGTAAAGTaGGAGCACCTTCACCACCGA +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVLHSVK*EHLHHR
Trigger: TCGGTGGTGAAGGTGCTCTCACTTTACAGAATGGAG...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATTCCCAGATAGGGTTCTaGAGAGAACAATGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYSQIGF*REQWVP
Trigger: AGGGACCCATTGTTCTCTTCAGAACCCTATCTGGGA...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTCCTGTGACCTTGACATaGTGGAAACCCGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSPVTLT*WKPGGG
Trigger: ACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGG...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTTCCTGCGTTCTCCACTaGAGGCTGGTGCTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSSCVLH*RLVLVS
Trigger: AGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGA...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGAGGCCCACAAACTTaGCTTCTTTGGGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSGGPQT*LLWGRR
Trigger: CCTTCGACCCCAAAGAAGGCAAGTTTGTGGGCCTCC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTTTCATGGGCTGGAGCTaGACCCGTGTGATTCGCGAA +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSFMGWS*TRVIRE
Trigger: TTCGCGAATCACACGGGTGCAGCTCCAGCCCATGAA...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTAGCAGCTCCCTGCGCTaGTGCTTCCTGAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVSSSLR*CFLRSI
Trigger: GATGGACCTCAGGAAGCAGCAGCGCAGGGAGCTGCT...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCACACAGTGGCAATCTaGTCCTCATTCAGCCTGACT +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYHTVAI*SSFSLT
Trigger: AGTCAGGCTGAATGAGGAGCAGATTGCCACTGTGTG...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGCACACAGTGGCAATCTaGTCCTCATTCAGCCTGACT +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRHTVAI*SSFSLT
Trigger: AGTCAGGCTGAATGAGGAGCAGATTGCCACTGTGTG...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATTTAGAAATATCCCTGTaGAAATATCAAGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYLEISL*KYQGVI
Trigger: GATGACCCCTTGATATTTGCACAGGGATATTTCTAA...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTTTCTACTGTGTTGGCTaGAGAGGCCAGGAACGCTGG +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSFYCVG*RGQERW
Trigger: CCAGCGTTCCTGGCCTCTGCAGCCAACACAGTAGAA...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTTTTTCTTGCGGAACATaGTGCCTTCCGGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSFSCGT*CLPAPS
Trigger: GGAAGGCGCCGGAAGGCACCATGTTCCGCAAGAAAA...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCCAAACTTGCCTTCTTTaGGGTCGAAGGAGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVQTCLL*GRRRCG
Trigger: TCCACACCTCCTTCGACCCCAAAGAAGGCAAGTTTG...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGATGTTCTGCCATTGTaGGGGGAGGCCCACAAACTT +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLDVLPL*GEAHKL
Trigger: AAGTTTGTGGGCCTCCCCCCACAATGGCAGAACATC...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCATGACTGACAACTTCTaGATGTCGTTGAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVMTDNF*MSLSSP
Trigger: GGGGCTGCTCAACGACATCCAGAAGTTGTCAGTCAT...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCTCATTCAGCCTGACTTaGGAGACGATGTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVSFSLT*ETMSVR
Trigger: CCTCACAGACATCGTCTCCCAAGTCAGGCTGAATGA...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCCAGCCTCACACACAGTaGCAATCTGCTCCTCATTCA +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVQPHTQ*QSAPHS
Trigger: TGAATGAGGAGCAGATTGCCACTGTGTGTGAGGCTG...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAGCCTCACACACAGTaGCAATCTGCTCCTCATTCA +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYQPHTQ*QSAPHS
Trigger: TGAATGAGGAGCAGATTGCCACTGTGTGTGAGGCTG...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCAGATATCCACCTCAGTaGCATACAAAGACCTGGAGA +
Preference number: 4 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCRYPPQ*HTKTWR
Trigger: TCTCCAGGTCTTTGTATGCCACTGAGGTGGATATCT...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260404.8
ENST00000560346.5
CDS-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGAAGTCTCGCAGCACTaGGGAGACCTTGTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLEVSQH*GDLVRV
Trigger: AACTCTCACAAGGTCTCCCCAGTGCTGCGAGACTTC...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGAGAGGCCAGGAACGCTaGCCTCTGCGTTTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLRGQER*PLRFLE
Trigger: TTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTCCTGGGCTGTCAAGGTaGCTTTCCTCCCCTTACACA +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSPGLSR*LSSPYT
Trigger: TGTGTAAGGGGAGGAAAGCCACCTTGACAGCCCAGG...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTACAGGAGTGGAGAGGTaGAAGCCAGGCCAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSTGVER*KPGQES
Trigger: GCTTTCTTGGCCTGGCTTCCACCTCTCCACTCCTGT...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGACGTCTTTGCTGATCTaGGCACAGAATCCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLTSLLI*AQNPKS
Trigger: GGACTTCGGATTCTGTGCTCAGATCAGCAAAGACGT...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR TCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGACTGGGGAGACCTTGTaGGAGTTTTTCAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLTGETL*EFFSLG
Trigger: ACCCAAGCTGAAAAACTCTCACAAGGTCTCCCCAGT...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTCAGTGGACAGGAACATaGTTCGGAATAGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSQWTGT*FGIACA
Trigger: AGCGCAGGCTATTCCGAAGCATGTTCCTGTCCACTG...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTGGGACTTCTGGGGGCTaGTGGTATCCGAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVGTSGG*WYPKWS
Trigger: TGACCACTTCGGATACCAGCAGCCCCCAGAAGTCCC...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGATGTTCTGCCATTGTaGGGGGAGGCCCACAAACTT +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSDVLPL*GEAHKL
Trigger: AAGTTTGTGGGCCTCCCCCCACAATGGCAGAACATC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGTCATTCAGCCTGACTTaGGAGACGATGTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLSFSLT*ETMSVR
Trigger: CCTCACAGACATCGTCTCCCAAGTCAGGCTGAATGA...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGCAGCCTCACACACAGTaGCAATCTGCTCCTCATTCA +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLQPHTQ*QSAPHS
Trigger: TGAATGAGGAGCAGATTGCCACTGTGTGTGAGGCTG...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTAGAGGCCAGGAACGCTaGCCTCTGCGTTTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSRGQER*PLRFLE
Trigger: TTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGTTACATTCCTGTCTCTaGCCCTCACGATGCACAGTA +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRLHSCL*PSRCTV
Trigger: TACTGTGCATCGTGAGGGCCAGAGACAGGAATGTAA...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGATGGTTTGCACACATaGATGCCTGTGACCTTGACA +
Preference number: 4 (lower is better)
Translates to: RGQERWPLRFLEISLCKYDGLHT*MPVTLT
Trigger: TGTCAAGGTCACAGGCATCCATGTGTGCAAACCATC...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGCATATCTTTAGGGGGTaGCAGCAGACTCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: NIPVQISRGHPVERGLHLHIFRG*QQTHSK
Trigger: CTTGCTGTGAGTCTGCTGCCACCCCCTAAAGATATG...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTACTGGGGAGACCTTGTaGGAGTTTTTCAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSTGETL*EFFSLG
Trigger: ACCCAAGCTGAAAAACTCTCACAAGGTCTCCCCAGT...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR GCA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCCCCAAAATAATCAGATaGAAAGGAGAAGCAAGAACA +
Preference number: 4 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPPKIIR*KGEART
Trigger: TGTTCTTGCTTCTCCTTTGCATCTGATTATTTTGGG...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS-3UTR CCA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTTTTTCTTGCGGAACATaGTGCCTTCCGGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVFSCGT*CLPAPS
Trigger: GGAAGGCGCCGGAAGGCACCATGTTCCGCAAGAAAA...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTCAAACTTGCCTTCTTTaGGGTCGAAGGAGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSQTCLL*GRRRCG
Trigger: TCCACACCTCCTTCGACCCCAAAGAAGGCAAGTTTG...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCAGATATCCACCTCAGTaGCATACAAAGACCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVRYPPQ*HTKTWR
Trigger: TCTCCAGGTCTTTGTATGCCACTGAGGTGGATATCT...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGAGATATCCACCTCAGTaGCATACAAAGACCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRRYPPQ*HTKTWR
Trigger: TCTCCAGGTCTTTGTATGCCACTGAGGTGGATATCT...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTATGGAAACCCGGAGGTaGTTCGCCTTCTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVMETRR*FAFSPR
Trigger: TCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCAT...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR TCA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGTTGGAGCTGATGACTaGCAACTTCTGGATGTCGTT +
Preference number: 4 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSVGADD*QLLDVV
Trigger: AACGACATCCAGAAGTTGTCAGTCATCAGCTCCAAC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CCA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTATGACTGACAACTTCTaGATGTCGTTGAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVMTDNF*MSLSSP
Trigger: GGGGCTGCTCAACGACATCCAGAAGTTGTCAGTCAT...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGTTAGAAATATCCCTGTaGAAATATCAAGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: PGTLASAFLRNIPVQISRLEISL*KYQGVI
Trigger: GATGACCCCTTGATATTTGCACAGGGATATTTCTAA...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
3UTR CAA 72 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTaGAAAGGTAACACAGTTGCCAATCCTTACATTCCT +
Preference number: 4 (lower is better)
Translates to: QWVPDDLVIEIN*KGNTVANPYIP
Trigger: AGGAATGTAAGGATTGGCAACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR GCA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTTTAGAAATATCCCTGTaGAAATATCAAGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVLEISL*KYQGVI
Trigger: GATGACCCCTTGATATTTGCACAGGGATATTTCTAA...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS GCA 90 bp CGTGGCTGTCTCCAGAGTGTGGCCGCCGAGCCCCGCGCCCAGGGCTaGCTGGCAGGCGAGGCCGCTCCACCCCGCTCCCGCCCATCAGGG +
Preference number: 5 (lower is better)
Translates to: RGCLQSVAAEPRAQG*LAGEAAPPRSRPSG
Trigger: CCCTGATGGGCGGGAGCGGGGTGGAGCGGCCTCGCCTGCCAGGCAGCCCTGGGCGCGGGGCTCGGCGGCCACACTCTGGAGACAGCCACG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS CCA 90 bp CGCAGGCCTGCGGAGCGGGAAGCCCAGGAACGCTCGAAGAGGTCGTaGGAGCCGGGCCCGCCCTCCGCGGGAGGGACCTCGGCGCGGGAA +
Preference number: 5 (lower is better)
Translates to: RRPAEREAQERSKRS*EPGPPSAGGTSARE
Trigger: TTCCCGCGCCGAGGTCCCTCCCGCGGAGGGCGGGCCCGGCTCCCACGACCTCTTCGAGCGTTCCTGGGCTTCCCGCTCCGCAGGCCTGCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559617.5
ENST00000560684.6
CDS GCA 90 bp GGCGGCTCCTGGCACATCAGGACGGGAGCAGCGCCCTCCCCCACCTaGCTGGACCGTGGCTGTCTCCAGAGTGTGGCCGCCGAGCCCCGC +
Preference number: 5 (lower is better)
Translates to: GGSWHIRTGAAPSPT*LDRGCLQSVAAEPR
Trigger: GCGGGGCTCGGCGGCCACACTCTGGAGACAGCCACGGTCCAGGCAGGTGGGGGAGGGCGCTGCTCCCGTCCTGATGTGCCAGGAGCCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS CCA 90 bp GCACATCAGGACGGGAGCAGCGCCCTCCCCCACCTGCCTGGACCGTaGCTGTCTCCAGAGTGTGGCCGCCGAGCCCCGCGCCCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: AHQDGSSALPHLPGP*LSPECGRRAPRPGL
Trigger: CAGCCCTGGGCGCGGGGCTCGGCGGCCACACTCTGGAGACAGCCACGGTCCAGGCAGGTGGGGGAGGGCGCTGCTCCCGTCCTGATGTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS CCA 90 bp GCTCCTGGCACATCAGGACGGGAGCAGCGCCCTCCCCCACCTGCCTaGACCGTGGCTGTCTCCAGAGTGTGGCCGCCGAGCCCCGCGCCC +
Preference number: 5 (lower is better)
Translates to: APGTSGREQRPPPPA*TVAVSRVWPPSPAP
Trigger: GGGCGCGGGGCTCGGCGGCCACACTCTGGAGACAGCCACGGTCCAGGCAGGTGGGGGAGGGCGCTGCTCCCGTCCTGATGTGCCAGGAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS TCA 90 bp GCTGACGTCCAGGCGCTGGGAACCGCTCCGCGCCCGCCTCCCGACTaGACTCCTGGCTCAGGTGCAAGAGGCGGCAGGCTCCTTGCGGGG +
Preference number: 5 (lower is better)
Translates to: ADVQALGTAPRPPPD*TPGSGARGGRLLAG
Trigger: CCCCGCAAGGAGCCTGCCGCCTCTTGCACCTGAGCCAGGAGTTCAGTCGGGAGGCGGGCGCGGAGCGGTTCCCAGCGCCTGGACGTCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560669.5
CDS CCA 90 bp CCAGGCGCTGGGAACCGCTCCGCGCCCGCCTCCCGACTGAACTCCTaGCTCAGGTGCAAGAGGCGGCAGGCTCCTTGCGGGGCTTACGGG +
Preference number: 5 (lower is better)
Translates to: PGAGNRSAPASRLNS*LRCKRRQAPCGAYG
Trigger: CCCGTAAGCCCCGCAAGGAGCCTGCCGCCTCTTGCACCTGAGCCAGGAGTTCAGTCGGGAGGCGGGCGCGGAGCGGTTCCCAGCGCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560669.5
CDS GCA 90 bp GGGAACCGCTCCGCGCCCGCCTCCCGACTGAACTCCTGGCTCAGGTaGAAGAGGCGGCAGGCTCCTTGCGGGGCTTACGGGGAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: GNRSAPASRLNSWLR*KRRQAPCGAYGEKG
Trigger: CCCCTTCTCCCCGTAAGCCCCGCAAGGAGCCTGCCGCCTCTTGCACCTGAGCCAGGAGTTCAGTCGGGAGGCGGGCGCGGAGCGGTTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560669.5
CDS-3UTR CAA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGGGTCCACCACGGGCTaGGGGCGCCGCAGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRGSTTG*GRRSVS
Trigger: GGACACACTGCGGCGCCCCAAGCCCGTGGTGGACCC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS GCA 90 bp GACCCGTGGGCTCTGTGGCTCGGGCCACGGCATCTGCTTGTGGCCTaGTGGTGTGCCCCCGTTGCAGCTGAGGTAGAGGCCGTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: DPWALWLGPRHLLVA*WCAPVAAEVEAVGV
Trigger: GACCCCCACGGCCTCTACCTCAGCTGCAACGGGGGCACACCAGCAGGCCACAAGCAGATGCCGTGGCCCGAGCCACAGAGCCCACGGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000559901.1
ENST00000560346.5
ENST00000560669.5
CDS GCA 90 bp CTGCGAGGCACCCTGAAACTCGGCGGGGCCCAGGGACTGTGCCTTTaGAGCCAGCCCATTGGGCAGGACCCGTGGGCTCTGTGGCTCGGG +
Preference number: 5 (lower is better)
Translates to: LRGTLKLGGAQGLCL*SQPIGQDPWALWLG
Trigger: CCCGAGCCACAGAGCCCACGGGTCCTGCCCAATGGGCTGGCTGCAAAGGCACAGTCCCTGGGCCCCGCCGAGTTTCAGGGTGCCTCGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000559901.1
ENST00000560346.5
ENST00000560669.5
CDS TCA 90 bp CTCTGCAGGCAGGCACCCAGCTGCAGACAGCGCTGCGAGGCACCCTaGAACTCGGCGGGGCCCAGGGACTGTGCCTTTGCAGCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: LCRQAPSCRQRCEAP*NSAGPRDCAFAASP
Trigger: TGGGCTGGCTGCAAAGGCACAGTCCCTGGGCCCCGCCGAGTTTCAGGGTGCCTCGCAGCGCTGTCTGCAGCTGGGTGCCTGCCTGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000559901.1
ENST00000560346.5
ENST00000560669.5
CDS GCA 90 bp ACAGCGCTGCGAGGCACCCTGAAACTCGGCGGGGCCCAGGGACTGTaGCTTTGCAGCCAGCCCATTGGGCAGGACCCGTGGGCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: TALRGTLKLGGAQGL*LCSQPIGQDPWALW
Trigger: CCACAGAGCCCACGGGTCCTGCCCAATGGGCTGGCTGCAAAGGCACAGTCCCTGGGCCCCGCCGAGTTTCAGGGTGCCTCGCAGCGCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000559901.1
ENST00000560346.5
ENST00000560669.5
CDS GCA 90 bp GGCGGTGACTCAGTGCTAGTGGGCCGGCTTAGTCACCTGGATGGCTaGTGGCGGCTCCTGGCACATCAGGACGGGAGCAGCGCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: GGDSVLVGRLSHLDG*WRLLAHQDGSSALP
Trigger: GGGGAGGGCGCTGCTCCCGTCCTGATGTGCCAGGAGCCGCCAGCAGCCATCCAGGTGACTAAGCCGGCCCACTAGCACTGAGTCACCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS CCA 90 bp CCGTGGGCTCTGTGGCTCGGGCCACGGCATCTGCTTGTGGCCTGCTaGTGTGCCCCCGTTGCAGCTGAGGTAGAGGCCGTGGGGGTCAGT +
Preference number: 5 (lower is better)
Translates to: PWALWLGPRHLLVAC*CAPVAAEVEAVGVS
Trigger: ACTGACCCCCACGGCCTCTACCTCAGCTGCAACGGGGGCACACCAGCAGGCCACAAGCAGATGCCGTGGCCCGAGCCACAGAGCCCACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000559901.1
ENST00000560346.5
ENST00000560669.5
CDS CCA 90 bp CTGTGCCTTTGCAGCCAGCCCATTGGGCAGGACCCGTGGGCTCTGTaGCTCGGGCCACGGCATCTGCTTGTGGCCTGCTGGTGTGCCCCC +
Preference number: 5 (lower is better)
Translates to: LCLCSQPIGQDPWAL*LGPRHLLVACWCAP
Trigger: GGGGGCACACCAGCAGGCCACAAGCAGATGCCGTGGCCCGAGCCACAGAGCCCACGGGTCCTGCCCAATGGGCTGGCTGCAAAGGCACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000559901.1
ENST00000560346.5
ENST00000560669.5
CDS CCA 90 bp GCCCAGGGACTGTGCCTTTGCAGCCAGCCCATTGGGCAGGACCCGTaGGCTCTGTGGCTCGGGCCACGGCATCTGCTTGTGGCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: AQGLCLCSQPIGQDP*ALWLGPRHLLVACW
Trigger: CCAGCAGGCCACAAGCAGATGCCGTGGCCCGAGCCACAGAGCCCACGGGTCCTGCCCAATGGGCTGGCTGCAAAGGCACAGTCCCTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000559901.1
ENST00000560346.5
ENST00000560669.5
CDS CCA 90 bp GAAACTCGGCGGGGCCCAGGGACTGTGCCTTTGCAGCCAGCCCATTaGGCAGGACCCGTGGGCTCTGTGGCTCGGGCCACGGCATCTGCT +
Preference number: 5 (lower is better)
Translates to: ETRRGPGTVPLQPAH*AGPVGSVARATASA
Trigger: AGCAGATGCCGTGGCCCGAGCCACAGAGCCCACGGGTCCTGCCCAATGGGCTGGCTGCAAAGGCACAGTCCCTGGGCCCCGCCGAGTTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000559901.1
ENST00000560346.5
ENST00000560669.5
CDS CCA 90 bp AGCAAGTGTTCCCGCGGGTGTTGCGACTGGCTGACGTCCAGGCGCTaGGAACCGCTCCGCGCCCGCCTCCCGACTGAACTCCTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: SKCSRGCCDWLTSRR*EPLRARLPTELLAQ
Trigger: CTGAGCCAGGAGTTCAGTCGGGAGGCGGGCGCGGAGCGGTTCCCAGCGCCTGGACGTCAGCCAGTCGCAACACCCGCGGGAACACTTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560669.5
CDS TCA 90 bp CGCTGCCCCGCACCACTGTCTTCATGGGCTGGAGCTGCACCCGTGTaGTTCGCGAAGGGTCCACCACGGGCTTGGGGCGCCGCAGTGTGT +
Preference number: 5 (lower is better)
Translates to: RCPAPLSSWAGAAPV*FAKGPPRAWGAAVC
Trigger: ACACACTGCGGCGCCCCAAGCCCGTGGTGGACCCTTCGCGAATCACACGGGTGCAGCTCCAGCCCATGAAGACAGTGGTGCGGGGCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558055.5
ENST00000558106.5
ENST00000558658.6
ENST00000559139.5
ENST00000559617.5
ENST00000560346.5
ENST00000560669.5
ENST00000561230.5
CDS GCA 90 bp GGCCGTGGCTGCTCCTTCTGGGCAGCGGGGTCCTGCGTTCTCCACTaGAGGCTGGTGCTTGTCTCTAGCCCAGGAAGCGGCACTCCCTGG +
Preference number: 5 (lower is better)
Translates to: GRGCSFWAAGSCVLH*RLVLVSSPGSGTPW
Trigger: CCAGGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGAAGGAGCAGCCACGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
CDS GCA 90 bp GCTCCTTCTGGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTGGTaGTTGTCTCTAGCCCAGGAAGCGGCACTCCCTGCCCAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: APSGQRGPAFSTAGW*LSLAQEAALPAQAS
Trigger: GCTGGCCTGGGCAGGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGAAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS GCA 90 bp GGCCGTGGCTGCTCCTTCTGGGCAGCGGGGTCCTGCGTTCTCCACTaGAGGCTGGTGCTTGTCTCTAGCCCAGGAAGCGGCACTCCCTGC +
Preference number: 5 (lower is better)
Translates to: GRGCSFWAAGSCVLH*RLVLVSSPGSGTPC
Trigger: GCAGGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGAAGGAGCAGCCACGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS CCA 90 bp GGTGACTCAGTGCTAGTGGGCCGGCTTAGTCACCTGGATGGCTGCTaGCGGCTCCTGGCACATCAGGACGGGAGCAGCGCCCTCCCCCAC +
Preference number: 5 (lower is better)
Translates to: GDSVLVGRLSHLDGC*RLLAHQDGSSALPH
Trigger: GTGGGGGAGGGCGCTGCTCCCGTCCTGATGTGCCAGGAGCCGCCAGCAGCCATCCAGGTGACTAAGCCGGCCCACTAGCACTGAGTCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS CCA 90 bp GCTGCTCCTTCTGGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTaGTGCTTGTCTCTAGCCCAGGAAGCGGCACTCCCTGCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: AAPSGQRGPAFSTAG*CLSLAQEAALPAQA
Trigger: GGCCTGGGCAGGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGAAGGAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGGAAGACCTGGGACCTaGCTGGGCCAGTCCTCCGCA +
Preference number: 5 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRGRPGT*LGQSSA
Trigger: TGCGGAGGACTGGCCCAGCAAGGTCCCAGGTCTTCC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGATTTGCAGCCAGCCCATaGGGCAGGACCCGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRFAASP*GRTRGL
Trigger: GAGCCCACGGGTCCTGCCCAATGGGCTGGCTGCAAA...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGCCAGCCAGGGCACCCTaGGCAACCGTGGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: GRGGAVQVGLHLQDIRREPARAP*ATVGSW
Trigger: CCAGGACCCCACGGTTGCCAAGGGTGCCCTGGCTGG...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGACTGAGGTCCATCATCTaGACGGCCACCTGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRLRSII*TATWRP
Trigger: GGGCCGCCAGGTGGCCGTCAAGATGATGGACCTCAG...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGGCTGTGGCTCTCTCTaGGGGGTCCCGCACCAGCAT +
Preference number: 5 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRGCGSL*GVPHQH
Trigger: ATGCTGGTGCGGGACCCCCAAGAGAGAGCCACAGCC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS TCA 90 bp GGAGGGACTTCTGGGGGCTGCTGGTATCCGAAGTGGTCAGAGGGCTaGAGGTCCCCACCGGCTGGTCCGAGGGCAAGGACTGGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: GGTSGGCWYPKWSEG*RSPPAGPRARTGPW
Trigger: CCAAGGCCCAGTCCTTGCCCTCGGACCAGCCGGTGGGGACCTTCAGCCCTCTGACCACTTCGGATACCAGCAGCCCCCAGAAGTCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000560346.5
CDS GCA 90 bp GGCCGTGGCTGCTCCTTCTGGGCAGCGGGGTCCTGCGTTCTCCACTaGAGGCTGGTGCTTGTCTCTAGCCCAGGAAGCGGCACTCCCTTC +
Preference number: 5 (lower is better)
Translates to: GRGCSFWAAGSCVLH*RLVLVSSPGSGTPF
Trigger: GAAGGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGAAGGAGCAGCCACGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558183.6
ENST00000558878.6
CDS CCA 90 bp CCTTCCGGCGCCTTCCGCCTCTTCCTCGCGACTCCTCACCCGCACTaGGCCTCTCTCTTAGGCGCTGAGGAGAGGGAAGACCTGGGACCT +
Preference number: 5 (lower is better)
Translates to: PSGAFRLFLATPHPH*ASLLGAEEREDLGP
Trigger: AGGTCCCAGGTCTTCCCTCTCCTCAGCGCCTAAGAGAGAGGCCCAGTGCGGGTGAGGAGTCGCGAGGAAGAGGCGGAAGGCGCCGGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558055.5
ENST00000558106.5
ENST00000558658.6
ENST00000559139.5
ENST00000559617.5
ENST00000560346.5
ENST00000560669.5
ENST00000560806.6
ENST00000561230.5
CDS CCA 90 bp CACCGGCTGGTCCGAGGGCAAGGACTGGGCCTTGGCCACCAGGCTTaGGGGGTTGTCTTTCTGCGGCGGTCGGAAAGAGGAGTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: HRLVRGQGLGLGHQA*GVVFLRRSERGVGP
Trigger: AGGCCCAACTCCTCTTTCCGACCGCCGCAGAAAGACAACCCCCCAAGCCTGGTGGCCAAGGCCCAGTCCTTGCCCTCGGACCAGCCGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557926.1
CDS-3UTR CAA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGAGGGTCCACCACGGGCTaGGGGCGCCGCAGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRGSTTG*GRRSVS
Trigger: GGACACACTGCGGCGCCCCAAGCCCGTGGTGGACCC...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGACCAGGGACTGTGCCTTaGCAGCCAGCCCATTGGGCA +
Preference number: 5 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRPGTVP*QPAHWA
Trigger: TGCCCAATGGGCTGGCTGCAAAGGCACAGTCCCTGG...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGATGGGGCAGGTACAGGTaGCTGGTGCTGATCTGGGCG +
Preference number: 5 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRWGRYR*LVLIWA
Trigger: CGCCCAGATCAGCACCAGCAACCTGTACCTGCCCCA...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAAGGTGGCAGGCATACTaGGGGTGGGCTCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRRWQAY*GWAQQV
Trigger: CACCTGCTGAGCCCACCCCAAGTATGCCTGCCACCT...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS TCA 90 bp CTTCCTCGCGACTCCTCACCCGCACTGGGCCTCTCTCTTAGGCGCTaGGGAGAGGGAAGACCTGGGACCTTGCTGGGCCAGTCCTCCGCA +
Preference number: 5 (lower is better)
Translates to: LPRDSSPALGLSLRR*GEGRPGTLLGQSSA
Trigger: TGCGGAGGACTGGCCCAGCAAGGTCCCAGGTCTTCCCTCTCCTCAGCGCCTAAGAGAGAGGCCCAGTGCGGGTGAGGAGTCGCGAGGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000558055.5
ENST00000558106.5
ENST00000558183.6
ENST00000558658.6
ENST00000558878.6
ENST00000559139.5
ENST00000559617.5
ENST00000560346.5
ENST00000560669.5
ENST00000560684.6
ENST00000560806.6
ENST00000561230.5
CDS GCA 90 bp GGCCGTGGCTGCTCCTTCTGGGCAGCGGGGTCCTGCGTTCTCCACTaGAGGCTGGTGCTTGTCTCTAGCCCAGGAAGCGGCACTCCTTTG +
Preference number: 5 (lower is better)
Translates to: GRGCSFWAAGSCVLH*RLVLVSSPGSGTPL
Trigger: CAAAGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGAAGGAGCAGCCACGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561230.5
CDS CCA 90 bp CACCGGCTGGTCCGAGGGCAAGGACTGGGCCTTGGCCACCAGGCTTaGGGGGTTGTCTTTCTGCGGCGGTCGGAAAGAGGAGTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: HRLVRGQGLGLGHQA*GVVFLRRSERGVGL
Trigger: AAGCCCAACTCCTCTTTCCGACCGCCGCAGAAAGACAACCCCCCAAGCCTGGTGGCCAAGGCCCAGTCCTTGCCCTCGGACCAGCCGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000560346.5
CDS CCA 90 bp TCAGGTAGCCCTGTCTGCAGCAGGAAGGGGTGGTCTAGGAGCTCCTaGGCTGTGGCTCTCTCTTGGGGGTCCCGCACCAGCATCCGCTCC +
Preference number: 5 (lower is better)
Translates to: SGSPVCSRKGWSRSS*AVALSWGSRTSIRS
Trigger: GGAGCGGATGCTGGTGCGGGACCCCCAAGAGAGAGCCACAGCCCAGGAGCTCCTAGACCACCCCTTCCTGCTGCAGACAGGGCTACCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000557808.1
ENST00000558658.6
ENST00000560346.5
CDS CCA 90 bp GCTGCTCCTTCTGGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTaGTGCTTGTCTCTAGCCCAGGAAGCGGCACTCCCTGGTAGGGAG +
Preference number: 5 (lower is better)
Translates to: AAPSGQRGPAFSTAG*CLSLAQEAALPGRE
Trigger: CTCCCTACCAGGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGAAGGAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441369.6
ENST00000558658.6
CDS CCA 90 bp ACTTCCGGCGCCTTCCGCCTCTTCCTCGCGACTCCTCACCCGCACTaGGCCTCTCTCTTAGGCGCTGAGGAGAGGGAAGACCTGGGACCT +
Preference number: 5 (lower is better)
Translates to: TSGAFRLFLATPHPH*ASLLGAEEREDLGP
Trigger: AGGTCCCAGGTCTTCCCTCTCCTCAGCGCCTAAGAGAGAGGCCCAGTGCGGGTGAGGAGTCGCGAGGAAGAGGCGGAAGGCGCCGGAAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558878.6
CDS CCA 90 bp TCTTCCGGCGCCTTCCGCCTCTTCCTCGCGACTCCTCACCCGCACTaGGCCTCTCTCTTAGGCGCTGAGGAGAGGGAAGACCTGGGACCT +
Preference number: 5 (lower is better)
Translates to: SSGAFRLFLATPHPH*ASLLGAEEREDLGP
Trigger: AGGTCCCAGGTCTTCCCTCTCCTCAGCGCCTAAGAGAGAGGCCCAGTGCGGGTGAGGAGTCGCGAGGAAGAGGCGGAAGGCGCCGGAAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558183.6
ENST00000560684.6
CDS-3UTR CAA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCCCAGCCAGGGCACCCTaGGCAACCGTGGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGPARAP*ATVGSW
Trigger: CCAGGACCCCACGGTTGCCAAGGGTGCCCTGGCTGG...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGCTGAGGTCCATCATCTaGACGGCCACCTGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: GRGGAVQVGLHLQDIRRELRSII*TATWRP
Trigger: GGGCCGCCAGGTGGCCGTCAAGATGATGGACCTCAG...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS TCA 90 bp ATTATGGCAAATGTAGCAAGTGTTCCCGCGGGTGTTGCGACTGGCTaGCGTCCAGGCGCTGGGAACCGCTCCGCGCCCGCCTCCCGACTG +
Preference number: 5 (lower is better)
Translates to: IMANVASVPAGVATG*RPGAGNRSAPASRL
Trigger: CAGTCGGGAGGCGGGCGCGGAGCGGTTCCCAGCGCCTGGACGTCAGCCAGTCGCAACACCCGCGGGAACACTTGCTACATTTGCCATAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560669.5
CDS GCA 90 bp GCTCCTTCTGGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTGGTaGTTGTCTCTAGCCCAGGAAGCGGCACTCCCTGGGCATCTTGCT +
Preference number: 5 (lower is better)
Translates to: APSGQRGPAFSTAGW*LSLAQEAALPGHLA
Trigger: AGCAAGATGCCCAGGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGAAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260404.8
CDS GCA 90 bp GCTCCTTCTGGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTGGTaGTTGTCTCTAGCCCAGGAAGCGGCACTCCCTGGTAGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: APSGQRGPAFSTAGW*LSLAQEAALPGREK
Trigger: CTTCTCCCTACCAGGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGAAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441369.6
ENST00000558658.6
CDS CCA 90 bp GCTGCTCCTTCTGGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTaGTGCTTGTCTCTAGCCCAGGAAGCGGCACTCCCTGGGCATCTT +
Preference number: 5 (lower is better)
Translates to: AAPSGQRGPAFSTAG*CLSLAQEAALPGHL
Trigger: AAGATGCCCAGGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGAAGGAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260404.8
CDS CCA 90 bp ATGCATTATGGCAAATGTAGCAAGTGTTCCCGCGGGTGTTGCGACTaGCTGACGTCCAGGCGCTGGGAACCGCTCCGCGCCCGCCTCCCG +
Preference number: 5 (lower is better)
Translates to: MHYGKCSKCSRGCCD*LTSRRWEPLRARLP
Trigger: CGGGAGGCGGGCGCGGAGCGGTTCCCAGCGCCTGGACGTCAGCCAGTCGCAACACCCGCGGGAACACTTGCTACATTTGCCATAATGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560669.5
CDS-3UTR CAA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGGGTCCACCACGGGCTaGGGGCGCCGCAGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: DACDLDMMETRRWFAFSPGSTTG*GRRSVS
Trigger: GGACACACTGCGGCGCCCCAAGCCCGTGGTGGACCC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CAA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGAGGTCGGAAAGAGGAGTaGGGCTTGCTCTGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRGRKEE*GLLCGG
Trigger: TCCACCACAGAGCAAGCCCAACTCCTCTTTCCGACC...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGTGGGGCAGGTACAGGTaGCTGGTGCTGATCTGGGCG +
Preference number: 5 (lower is better)
Translates to: GRGGAVQVGLHLQDIRREWGRYR*LVLIWA
Trigger: CGCCCAGATCAGCACCAGCAACCTGTACCTGCCCCA...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGAGGTGGCAGGCATACTaGGGGTGGGCTCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: GRGGAVQVGLHLQDIRRERWQAY*GWAQQV
Trigger: CACCTGCTGAGCCCACCCCAAGTATGCCTGCCACCT...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS CCA 90 bp CCTGTGGGCGTAGGTGGCAGGCATACTTGGGGTGGGCTCAGCAGGTaGAGGTCTGCTTTCGGTAGAGCTGGATCAGGGGCACCAGGCACT +
Preference number: 5 (lower is better)
Translates to: PVGVGGRHTWGGLSR*RSAFGRAGSGAPGT
Trigger: AGTGCCTGGTGCCCCTGATCCAGCTCTACCGAAAGCAGACCTCCACCTGCTGAGCCCACCCCAAGTATGCCTGCCACCTACGCCCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000557808.1
ENST00000558658.6
ENST00000560346.5
CDS CCA 90 bp GCTGCTCCTTCTGGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTaGTGCTTGTCTCTAGCCCAGGAAGCGGCACTCCCTTCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: AAPSGQRGPAFSTAG*CLSLAQEAALPSGK
Trigger: TTTGCCTGAAGGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGAAGGAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558183.6
ENST00000558878.6
CDS CCA 90 bp CAGCTGGCCCCAGCTCTCCTTGGTGGGTCTGTCTCCTTCCTCCCCTaGTCACCTGCCCTGTGGCCAGTTACTGCCTGCATGAGTGACCAC +
Preference number: 5 (lower is better)
Translates to: QLAPALLGGSVSFLP*SPALWPVTACMSDH
Trigger: GTGGTCACTCATGCAGGCAGTAACTGGCCACAGGGCAGGTGACCAGGGGAGGAAGGAGACAGACCCACCAAGGAGAGCTGGGGCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557808.1
CDS-3UTR CAA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCCAGCCAGGGCACCCTaGGCAACCGTGGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: DACDLDMMETRRWFAFSPPARAP*ATVGSW
Trigger: CCAGGACCCCACGGTTGCCAAGGGTGCCCTGGCTGG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CAA 90 bp CAGGCCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTAGGTGGCAGGCATACTaGGGGTGGGCTCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: QAIHSSGRGGAVQVGLHLRWQAY*GWAQQV
Trigger: CACCTGCTGAGCCCACCCCAAGTATGCCTGCCACCT...AAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS TCA 90 bp CCGGCTGGTGGGGCTGCGGCCACGCAGGGTGTTGGAGCTGATGACTaGCAACTTCTGGATGTCGTTGAGCAGCCCCGAGATGTAGCCATC +
Preference number: 5 (lower is better)
Translates to: PAGGAAATQGVGADD*QLLDVVEQPRDVAI
Trigger: GATGGCTACATCTCGGGGCTGCTCAACGACATCCAGAAGTTGTCAGTCATCAGCTCCAACACCCTGCGTGGCCGCAGCCCCACCAGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558055.5
ENST00000558106.5
ENST00000558658.6
ENST00000559139.5
ENST00000559617.5
ENST00000560346.5
ENST00000560669.5
CDS GCA 90 bp GCTCCTTCTGGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTGGTaGTTGTCTCTAGCCCAGGAAGCGGCACTCCTTTGGGATTTCTCC +
Preference number: 5 (lower is better)
Translates to: APSGQRGPAFSTAGW*LSLAQEAALLWDFS
Trigger: GGAGAAATCCCAAAGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGAAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561230.5
CDS CCA 90 bp GCTGCTCCTTCTGGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTaGTGCTTGTCTCTAGCCCAGGAAGCGGCACTCCTTTGGGATTTC +
Preference number: 5 (lower is better)
Translates to: AAPSGQRGPAFSTAG*CLSLAQEAALLWDF
Trigger: GAAATCCCAAAGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGAAGGAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561230.5
CDS-3UTR CAA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGGCCACGGCATCTGCTaGTGGCCTGCTGGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: GCRGQERWPLRFLEISLCGHGIC*WPAGVP
Trigger: GGGCACACCAGCAGGCCACAAGCAGATGCCGTGGCC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGGCCACGGCATCTGCTaGTGGCCTGCTGGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: DACDLDMMETRRWFAFSPGHGIC*WPAGVP
Trigger: GGGCACACCAGCAGGCCACAAGCAGATGCCGTGGCC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CAA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGTTTGCAGCCAGCCCATaGGGCAGGACCCGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGFAASP*GRTRGL
Trigger: GAGCCCACGGGTCCTGCCCAATGGGCTGGCTGCAAA...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CAA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGCTGAGGTCCATCATCTaGACGGCCACCTGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGLRSII*TATWRP
Trigger: GGGCCGCCAGGTGGCCGTCAAGATGATGGACCTCAG...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CAA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGGCTGGGGCAGATGGTTaGCACACATGGATGCCTGTG +
Preference number: 5 (lower is better)
Translates to: GRGGAVQVGLHLQDIRREAGADG*HTWMPV
Trigger: CACAGGCATCCATGTGTGCAAACCATCTGCCCCAGC...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS TCA 90 bp CCGACCCCAGAAGCCACTCCTTTACCGAAACATCCCCGTGGGAGATaGGTTCAGAGCCAGCCCGGGAGGACTCCAGTCAGCTCGGACAAG +
Preference number: 5 (lower is better)
Translates to: PTPEATPLPKHPRGR*VQSQPGRTPVSSDK
Trigger: CTTGTCCGAGCTGACTGGAGTCCTCCCGGGCTGGCTCTGAACTCATCTCCCACGGGGATGTTTCGGTAAAGGAGTGGCTTCTGGGGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS GCA 90 bp GCTCCTTCTGGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTGGTaGTTGTCTCTAGCCCAGGAAGCGGCACTCCCTTCAGGCAAAATA +
Preference number: 5 (lower is better)
Translates to: APSGQRGPAFSTAGW*LSLAQEAALPSGKI
Trigger: TATTTTGCCTGAAGGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGAAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558183.6
ENST00000558878.6
CDS GCA 90 bp TCAGAAATGCATTATGGCAAATGTAGCAAGTGTTCCCGCGGGTGTTaGGACTGGCTGACGTCCAGGCGCTGGGAACCGCTCCGCGCCCGC +
Preference number: 5 (lower is better)
Translates to: SEMHYGKCSKCSRGC*DWLTSRRWEPLRAR
Trigger: GCGGGCGCGGAGCGGTTCCCAGCGCCTGGACGTCAGCCAGTCGCAACACCCGCGGGAACACTTGCTACATTTGCCATAATGCATTTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560669.5
CDS CCA 90 bp TGCCACTCCGACCCCAGAAGCCACTCCTTTACCGAAACATCCCCGTaGGAGATGAGTTCAGAGCCAGCCCGGGAGGACTCCAGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: CHSDPRSHSFTETSP*EMSSEPAREDSSQL
Trigger: GAGCTGACTGGAGTCCTCCCGGGCTGGCTCTGAACTCATCTCCCACGGGGATGTTTCGGTAAAGGAGTGGCTTCTGGGGTCGGAGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS CCA 90 bp ACCTGTCTTGACAGGGCTCAAGTCCTGGGCCACAAGCCCGAGTGCTaGCTCAGCGTGGACCTTGGGCTTGGTGTTCCTAAGTCCCGGCTT +
Preference number: 5 (lower is better)
Translates to: TCLDRAQVLGHKPEC*LSVDLGLGVPKSRL
Trigger: AAGCCGGGACTTAGGAACACCAAGCCCAAGGTCCACGCTGAGCCAGCACTCGGGCTTGTGGCCCAGGACTTGAGCCCTGTCAAGACAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560806.6
CDS-3UTR CAA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCTTTGCAGCCAGCCCATaGGGCAGGACCCGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: GCRGQERWPLRFLEISLCFAASP*GRTRGL
Trigger: GAGCCCACGGGTCCTGCCCAATGGGCTGGCTGCAAA...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CAGGCCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTAAAGAGGAGTTGGGCTaGCTCTGTGGTGGAGGGCCT +
Preference number: 5 (lower is better)
Translates to: QAIHSSGRGGAVQVGLHLKEELG*LCGGGP
Trigger: AGGCCCTCCACCACAGAGCAAGCCCAACTCCTCTTT...AAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGCTGAGGTCCATCATCTaGACGGCCACCTGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: VEARPRKQVPSGQNLVGELRSII*TATWRP
Trigger: GGGCCGCCAGGTGGCCGTCAAGATGATGGACCTCAG...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCGGCTGTGGCTCTCTCTaGGGGGTCCCGCACCAGCAT +
Preference number: 5 (lower is better)
Translates to: GCRGQERWPLRFLEISLCGCGSL*GVPHQH
Trigger: ATGCTGGTGCGGGACCCCCAAGAGAGAGCCACAGCC...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGGCTGTGGCTCTCTCTaGGGGGTCCCGCACCAGCAT +
Preference number: 5 (lower is better)
Translates to: DACDLDMMETRRWFAFSPGCGSL*GVPHQH
Trigger: ATGCTGGTGCGGGACCCCCAAGAGAGAGCCACAGCC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CAA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGGCCTTTTCTACTGTGTaGGCTGCAGAGGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: GRGGAVQVGLHLQDIRREAFSTV*AAEARN
Trigger: GTTCCTGGCCTCTGCAGCCAACACAGTAGAAAAGGC...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GGGAGAGACACTGAGGGGGCAGGTCCGGCCTGGCCCAGTAGGCTGAAGGGCAGACGTTTCTTCTTTTTCTaGCGGAACATGGTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: GRDTEGAGPAWPSRLKGRRFFFF*RNMVPS
Trigger: GGAAGGCACCATGTTCCGCAAGAAAAAGAAGAAACG...TCTGCCCTTCAGCCTACTGGGCCAGGCCGGACCTGCCCCCTCAGTGTCTCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAGGGTCCACCACGGGCTaGGGGCGCCGCAGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIGSTTG*GRRSVS
Trigger: GGACACACTGCGGCGCCCCAAGCCCGTGGTGGACCC...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGCGGCCACGCAGGGTGTaGGAGCTGATGACTGACAAC +
Preference number: 5 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGRPRRV*ELMTDN
Trigger: GTTGTCAGTCATCAGCTCCAACACCCTGCGTGGCCG...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CAA 90 bp GGCTGCAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCCCAGGGACTGTGCCTTaGCAGCCAGCCCATTGGGCA +
Preference number: 5 (lower is better)
Translates to: GCRGQERWPLRFLEISLCPGTVP*QPAHWA
Trigger: TGCCCAATGGGCTGGCTGCAAAGGCACAGTCCCTGG...GCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCCAGGGACTGTGCCTTaGCAGCCAGCCCATTGGGCA +
Preference number: 5 (lower is better)
Translates to: DACDLDMMETRRWFAFSPPGTVP*QPAHWA
Trigger: TGCCCAATGGGCTGGCTGCAAAGGCACAGTCCCTGG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CAA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCGGTCGGAAAGAGGAGTaGGGCTTGCTCTGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGGRKEE*GLLCGG
Trigger: TCCACCACAGAGCAAGCCCAACTCCTCTTTCCGACC...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCTGGGGCAGGTACAGGTaGCTGGTGCTGATCTGGGCG +
Preference number: 5 (lower is better)
Translates to: DACDLDMMETRRWFAFSPWGRYR*LVLIWA
Trigger: CGCCCAGATCAGCACCAGCAACCTGTACCTGCCCCA...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS GCA 90 bp AGGATGCTGGAGGGCCTGGAAGAAGCAAAAAGGTGCGCTCCACTCTaGCTGCCAAGAAATGTCACCACGGGGGCTCCCTTCACCCTTTCC +
Preference number: 5 (lower is better)
Translates to: RMLEGLEEAKRCAPL*LPRNVTTGAPFTLS
Trigger: GGAAAGGGTGAAGGGAGCCCCCGTGGTGACATTTCTTGGCAGGCAGAGTGGAGCGCACCTTTTTGCTTCTTCCAGGCCCTCCAGCATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557926.1
CDS CCA 90 bp AGGCACAGTGAGGGGGAGCATCTGTTCCTGCTCACGGAGGAGCTTTaGATATTTCTCACGGTCGTCACTCAGGAAGAGCCTTCCGGCGCC +
Preference number: 5 (lower is better)
Translates to: RHSEGEHLFLLTEEL*IFLTVVTQEEPSGA
Trigger: GGCGCCGGAAGGCTCTTCCTGAGTGACGACCGTGAGAAATATCCAAAGCTCCTCCGTGAGCAGGAACAGATGCTCCCCCTCACTGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560806.6
CDS CCA 90 bp AGAGACCAGATATCCACCTGCAGGAGGAAAATGTCCCTGACCCCATaGCCAGACCCTGGCCCATTGGTAGCTGCGTTCTGGTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: RDQISTCRRKMSLTP*PDPGPLVAAFWWQQ
Trigger: CTGCTGCCACCAGAACGCAGCTACCAATGGGCCAGGGTCTGGCCATGGGGTCAGGGACATTTTCCTCCTGCAGGTGGATATCTGGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557808.1
CDS-3UTR CAA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGGGGAGGCCCACAAACTaGCCTTCTTTGGGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGGRPTN*PSLGSK
Trigger: CTTCGACCCCAAAGAAGGCAAGTTTGTGGGCCTCCC...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CAA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCGGGTCCACCACGGGCTaGGGGCGCCGCAGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVGSTTG*GRRSVS
Trigger: GGACACACTGCGGCGCCCCAAGCCCGTGGTGGACCC...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATCGGCCACGCAGGGTGTaGGAGCTGATGACTGACAAC +
Preference number: 5 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYRPRRV*ELMTDN
Trigger: GTTGTCAGTCATCAGCTCCAACACCCTGCGTGGCCG...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCGGCCACGGCATCTGCTaGTGGCCTGCTGGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCGHGIC*WPAGVP
Trigger: GGGCACACCAGCAGGCCACAAGCAGATGCCGTGGCC...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCTTTGCAGCCAGCCCATaGGGCAGGACCCGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPFAASP*GRTRGL
Trigger: GAGCCCACGGGTCCTGCCCAATGGGCTGGCTGCAAA...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGACCAGGGACTGTGCCTTaGCAGCCAGCCCATTGGGCA +
Preference number: 5 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGPGTVP*QPAHWA
Trigger: TGCCCAATGGGCTGGCTGCAAAGGCACAGTCCCTGG...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGGGTCGGAAAGAGGAGTaGGGCTTGCTCTGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGGRKEE*GLLCGG
Trigger: TCCACCACAGAGCAAGCCCAACTCCTCTTTCCGACC...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CAA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATACCAGCCAGGGCACCCTaGGCAACCGTGGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIPARAP*ATVGSW
Trigger: CCAGGACCCCACGGTTGCCAAGGGTGCCCTGGCTGG...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CAGGCCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCTCATTCAGCCTGACTaGGGAGACGATGTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: QAIHSSGRGGAVQVGLHLLIQPD*GDDVCE
Trigger: CTCACAGACATCGTCTCCCAAGTCAGGCTGAATGAG...AAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCTCCCAGATAGGGTTTaGGGGTGGGCTCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: DACDLDMMETRRWFAFSPLPDRV*GWAQQV
Trigger: CACCTGCTGAGCCCACCCCAAAACCCTATCTGGGAG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS TCA 90 bp GGGGTTCCCACCAGGGACTTCCTCTTAGGGACGTCTTTGCTGATCTaGGCACAGAATCCGAAGTCCGAGAGCTTCACCCTGCCATCGAGG +
Preference number: 5 (lower is better)
Translates to: GVPTRDFLLGTSLLI*AQNPKSESFTLPSR
Trigger: CCTCGATGGCAGGGTGAAGCTCTCGGACTTCGGATTCTGTGCTCAGATCAGCAAAGACGTCCCTAAGAGGAAGTCCCTGGTGGGAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000560346.5
CDS GCA 90 bp TGCTGGAGGGCCTGGAAGAAGCAAAAAGGTGCGCTCCACTCTGCCTaGCAAGAAATGTCACCACGGGGGCTCCCTTCACCCTTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: CWRAWKKQKGALHSA*QEMSPRGLPSPFPF
Trigger: GAAAGGAAAGGGTGAAGGGAGCCCCCGTGGTGACATTTCTTGGCAGGCAGAGTGGAGCGCACCTTTTTGCTTCTTCCAGGCCCTCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557926.1
CDS-3UTR CAA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATCACTCCCTGGGCATCTaGCTGTGTCTCTGTCCTGTG +
Preference number: 5 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYHSLGI*LCLCPV
Trigger: CACAGGACAGAGACACAGCAAGATGCCCAGGGAGTG...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260404.8
CDS-3UTR CAA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGAACAAACTTGCCTTCTTaGGGGTCGAAGGAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRTNLPS*GSKEVW
Trigger: CCACACCTCCTTCGACCCCAAAGAAGGCAAGTTTGT...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGGGGAGGCCCACAAACTaGCCTTCTTTGGGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: VEARPRKQVPSGQNLVGEGRPTN*PSLGSK
Trigger: CTTCGACCCCAAAGAAGGCAAGTTTGTGGGCCTCCC...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAGGCCACGGCATCTGCTaGTGGCCTGCTGGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIGHGIC*WPAGVP
Trigger: GGGCACACCAGCAGGCCACAAGCAGATGCCGTGGCC...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCAGGGACTGTGCCTTaGCAGCCAGCCCATTGGGCA +
Preference number: 5 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPAPGTVP*QPAHWA
Trigger: TGCCCAATGGGCTGGCTGCAAAGGCACAGTCCCTGG...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAAAGAGGAGTTGGGCTaGCTCTGTGGTGGAGGGCCT +
Preference number: 5 (lower is better)
Translates to: DACDLDMMETRRWFAFSPKEELG*LCGGGP
Trigger: AGGCCCTCCACCACAGAGCAAGCCCAACTCCTCTTT...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CAA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCTGGGGCAGGTACAGGTaGCTGGTGCTGATCTGGGCG +
Preference number: 5 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPWGRYR*LVLIWA
Trigger: CGCCCAGATCAGCACCAGCAACCTGTACCTGCCCCA...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGGCTGGGGCAGATGGTTaGCACACATGGATGCCTGTG +
Preference number: 5 (lower is better)
Translates to: VEARPRKQVPSGQNLVGEAGADG*HTWMPV
Trigger: CACAGGCATCCATGTGTGCAAACCATCTGCCCCAGC...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGCTGGGGCAGATGGTTaGCACACATGGATGCCTGTG +
Preference number: 5 (lower is better)
Translates to: DACDLDMMETRRWFAFSPAGADG*HTWMPV
Trigger: CACAGGCATCCATGTGTGCAAACCATCTGCCCCAGC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CAA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAGGAAGACCTGGGACCTaGCTGGGCCAGTCCTCCGCA +
Preference number: 5 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIGRPGT*LGQSSA
Trigger: TGCGGAGGACTGGCCCAGCAAGGTCCCAGGTCTTCC...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCTCCTCAGAGCCATGCTaGGCAGCCTTCATTCCATGC +
Preference number: 5 (lower is better)
Translates to: DACDLDMMETRRWFAFSPSSEPC*AAFIPC
Trigger: GCATGGAATGAAGGCTGCCAAGCATGGCTCTGAGGA...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CAA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGCCAGCCAGGGCACCCTaGGCAACCGTGGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: NIPVQISRGHPVERGLHLPARAP*ATVGSW
Trigger: CCAGGACCCCACGGTTGCCAAGGGTGCCCTGGCTGG...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGAGCCTCTTCATGGCTaGCACTGGGGAGTCACTGAA +
Preference number: 5 (lower is better)
Translates to: DACDLDMMETRRWFAFSPEPLHG*HWGVTE
Trigger: TTCAGTGACTCCCCAGTGCAAGCCATGAAGAGGCTC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CAA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAGGCTGTGGCTCTCTCTaGGGGGTCCCGCACCAGCAT +
Preference number: 5 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIGCGSL*GVPHQH
Trigger: ATGCTGGTGCGGGACCCCCAAGAGAGAGCCACAGCC...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGAGGGGCGTCCTTGCAATTTCTTaGCCCCCAGGTAGGTCACTA +
Preference number: 5 (lower is better)
Translates to: ARPRKQVPSGQNLVGERGVLAIS*PPGRSL
Trigger: TAGTGACCTACCTGGGGGCAAAGAAATTGCAAGGAC...GCCCCTCTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGCCACCATATCTGCTATaGCACTCTGCCTGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: VEARPRKQVPSGQNLVGEPPYLL*HSACCH
Trigger: GTGGCAGCAGGCAGAGTGCAATAGCAGATATGGTGG...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS GCA 90 bp GAGAGGGAAGACCTGGGACCTTGCTGGGCCAGTCCTCCGCAGGCCTaGGCGGAAACAGATCAGAAATGCATTATGGCAAATGTAGCAAGT +
Preference number: 5 (lower is better)
Translates to: EREDLGPCWASPPQA*AETDQKCIMANVAS
Trigger: ACTTGCTACATTTGCCATAATGCATTTCTGATCTGTTTCCGCGCAGGCCTGCGGAGGACTGGCCCAGCAAGGTCCCAGGTCTTCCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560669.5
CDS-3UTR CAA 90 bp CCACTCCACTGGCCAGGTAGACACAGGAGTGGAGAGGTGGAAGCCAGGCCAAGACGTTTCTTCTTTTTCTaGCGGAACATGGTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: PLHWPGRHRSGEVEARPRRFFFF*RNMVPS
Trigger: GGAAGGCACCATGTTCCGCAAGAAAAAGAAGAAACG...TCTTGGCCTGGCTTCCACCTCTCCACTCCTGTGTCTACCTGGCCAGTGGAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGACAAACTTGCCTTCTTaGGGGTCGAAGGAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: VEARPRKQVPSGQNLVGETNLPS*GSKEVW
Trigger: CCACACCTCCTTCGACCCCAAAGAAGGCAAGTTTGT...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCACAAACTTGCCTTCTTaGGGGTCGAAGGAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: DACDLDMMETRRWFAFSPTNLPS*GSKEVW
Trigger: CCACACCTCCTTCGACCCCAAAGAAGGCAAGTTTGT...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CAA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATTTTGCAGCCAGCCCATaGGGCAGGACCCGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: RGQERWPLRFLEISLCKYFAASP*GRTRGL
Trigger: GAGCCCACGGGTCCTGCCCAATGGGCTGGCTGCAAA...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATACCAGGGACTGTGCCTTaGCAGCCAGCCCATTGGGCA +
Preference number: 5 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIPGTVP*QPAHWA
Trigger: TGCCCAATGGGCTGGCTGCAAAGGCACAGTCCCTGG...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp ACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCCCAAAGAGGAGTTGGGCTaGCTCTGTGGTGGAGGGCCT +
Preference number: 5 (lower is better)
Translates to: TDPILSLSLRNCPLTPCPKEELG*LCGGGP
Trigger: AGGCCCTCCACCACAGAGCAAGCCCAACTCCTCTTT...GGGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCGGTCGGAAAGAGGAGTaGGGCTTGCTCTGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPAGRKEE*GLLCGG
Trigger: TCCACCACAGAGCAAGCCCAACTCCTCTTTCCGACC...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATGGGGCAGGTACAGGTaGCTGGTGCTGATCTGGGCG +
Preference number: 5 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIWGRYR*LVLIWA
Trigger: CGCCCAGATCAGCACCAGCAACCTGTACCTGCCCCA...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGATCCTGAGCGCAGCCTaGAACTGCTCATGTGTCACA +
Preference number: 5 (lower is better)
Translates to: VEARPRKQVPSGQNLVGEILSAA*NCSCVT
Trigger: TGTGACACATGAGCAGTTCAAGGCTGCGCTCAGGAT...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCATCCTGAGCGCAGCCTaGAACTGCTCATGTGTCACA +
Preference number: 5 (lower is better)
Translates to: DACDLDMMETRRWFAFSPILSAA*NCSCVT
Trigger: TGTGACACATGAGCAGTTCAAGGCTGCGCTCAGGAT...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CAA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCTGAGGTCCATCATCTaGACGGCCACCTGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: RGQERWPLRFLEISLCKYLRSII*TATWRP
Trigger: GGGCCGCCAGGTGGCCGTCAAGATGATGGACCTCAG...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCCTCATTCAGCCTGACTaGGGAGACGATGTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: DACDLDMMETRRWFAFSPLIQPD*GDDVCE
Trigger: CTCACAGACATCGTCTCCCAAGTCAGGCTGAATGAG...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CAA 90 bp CCCAGGAGTGTTAGACTTAGCATGGACCACTCCACTGGCCAGGTAGACACAGGAGAGCCTCTTCATGGCTaGCACTGGGGAGTCACTGAA +
Preference number: 5 (lower is better)
Translates to: PRSVRLSMDHSTGQVDTGEPLHG*HWGVTE
Trigger: TTCAGTGACTCCCCAGTGCAAGCCATGAAGAGGCTC...TCCTGTGTCTACCTGGCCAGTGGAGTGGTCCATGCTAAGTCTAACACTCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260404.8
ENST00000560346.5
CDS GCA 90 bp CGGCACTCCTTTGGGATTTCTCCATTAAATCCTCAGGCATCGACCTaGTCGTTTGGGGCGCCGAGCTGCTCCAACGTTGCTTGGCAATTT +
Preference number: 5 (lower is better)
Translates to: RHSFGISPLNPQAST*SFGAPSCSNVAWQF
Trigger: AAATTGCCAAGCAACGTTGGAGCAGCTCGGCGCCCCAAACGAGCAGGTCGATGCCTGAGGATTTAATGGAGAAATCCCAAAGGAGTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561230.5
CDS GCA 90 bp TCCGCAGGCTTTGGGATTTCTCCATTAAATCCTCAGGCATCGACCTaGTCGTTTGGGGCGCCGAGCTGCTCCAACGTTGCTTGGCAATTT +
Preference number: 5 (lower is better)
Translates to: SAGFGISPLNPQAST*SFGAPSCSNVAWQF
Trigger: AAATTGCCAAGCAACGTTGGAGCAGCTCGGCGCCCCAAACGAGCAGGTCGATGCCTGAGGATTTAATGGAGAAATCCCAAAGCCTGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558055.5
CDS-3UTR CAA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGGAAGACCTGGGACCTaGCTGGGCCAGTCCTCCGCA +
Preference number: 5 (lower is better)
Translates to: NIPVQISRGHPVERGLHLGRPGT*LGQSSA
Trigger: TGCGGAGGACTGGCCCAGCAAGGTCCCAGGTCTTCC...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCAGATAGGGTTTTGGGGTGGGCGTTTCTTCTTTTTCTaGCGGAACATGGTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: DGNPEVVRLLSQIGFWGGRFFFF*RNMVPS
Trigger: GGAAGGCACCATGTTCCGCAAGAAAAAGAAGAAACG...CCCACCCCAAAACCCTATCTGGGAGAGAAGGCGAACCACCTCCGGGTTTCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542403.3
CDS-3UTR CAA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGCCACGGCATCTGCTaGTGGCCTGCTGGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSGHGIC*WPAGVP
Trigger: GGGCACACCAGCAGGCCACAAGCAGATGCCGTGGCC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGGCTGTGGCTCTCTCTaGGGGGTCCCGCACCAGCAT +
Preference number: 5 (lower is better)
Translates to: NIPVQISRGHPVERGLHLGCGSL*GVPHQH
Trigger: ATGCTGGTGCGGGACCCCCAAGAGAGAGCCACAGCC...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGTCCTTGCAATTTCTTaGCCCCCAGGTAGGTCACTA +
Preference number: 5 (lower is better)
Translates to: DACDLDMMETRRWFAFSPVLAIS*PPGRSL
Trigger: TAGTGACCTACCTGGGGGCAAAGAAATTGCAAGGAC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000542403.3
ENST00000560346.5
CDS-3UTR CAA 90 bp CCGTGGCCCTCTCGAGACTCGAGGTTTGAAGCTGGAGCTGAGAACAGCAGGTATGTCCTTGCAATTTCTTaGCCCCCAGGTAGGTCACTA +
Preference number: 5 (lower is better)
Translates to: PWPSRDSRFEAGAENSRYVLAIS*PPGRSL
Trigger: TAGTGACCTACCTGGGGGCAAAGAAATTGCAAGGAC...ATACCTGCTGTTCTCAGCTCCAGCTTCAAACCTCGAGTCTCGAGAGGGCCACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GTGGAAGCCAGGCCAAGAAAGCAGGTCCCTTCAGGCCAGAACTTAGTGGGAGAGCGTTTCTTCTTTTTCTaGCGGAACATGGTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: VEARPRKQVPSGQNLVGERFFFF*RNMVPS
Trigger: GGAAGGCACCATGTTCCGCAAGAAAAAGAAGAAACG...CTCTCCCACTAAGTTCTGGCCTGAAGGGACCTGCTTTCTTGGCCTGGCTTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAGGGAGGCCCACAAACTaGCCTTCTTTGGGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIGRPTN*PSLGSK
Trigger: CTTCGACCCCAAAGAAGGCAAGTTTGTGGGCCTCCC...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCGGCCACGCAGGGTGTaGGAGCTGATGACTGACAAC +
Preference number: 5 (lower is better)
Translates to: RGQERWPLRFLEISLCKYRPRRV*ELMTDN
Trigger: GTTGTCAGTCATCAGCTCCAACACCCTGCGTGGCCG...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGCGGCCACGCAGGGTGTaGGAGCTGATGACTGACAAC +
Preference number: 5 (lower is better)
Translates to: PGTLASAFLRNIPVQISRRPRRV*ELMTDN
Trigger: GTTGTCAGTCATCAGCTCCAACACCCTGCGTGGCCG...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAAAAGAGGAGTTGGGCTaGCTCTGTGGTGGAGGGCCT +
Preference number: 5 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIKEELG*LCGGGP
Trigger: AGGCCCTCCACCACAGAGCAAGCCCAACTCCTCTTT...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGTGGGGCAGGTACAGGTaGCTGGTGCTGATCTGGGCG +
Preference number: 5 (lower is better)
Translates to: NIPVQISRGHPVERGLHLWGRYR*LVLIWA
Trigger: CGCCCAGATCAGCACCAGCAACCTGTACCTGCCCCA...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCATCCTGAGCGCAGCCTaGAACTGCTCATGTGTCACA +
Preference number: 5 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPAILSAA*NCSCVT
Trigger: TGTGACACATGAGCAGTTCAAGGCTGCGCTCAGGAT...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGAGGTGGCAGGCATACTaGGGGTGGGCTCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: NIPVQISRGHPVERGLHLRWQAY*GWAQQV
Trigger: CACCTGCTGAGCCCACCCCAAGTATGCCTGCCACCT...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTCAGGACATCAGACGTGAGTTCACATTTCAATCTTaGGAGAGAATACTGAGAGGA +
Preference number: 5 (lower is better)
Translates to: GRGGAVQVGLHLQDIRREFTFQS*ERILRG
Trigger: TCCTCTCAGTATTCTCTCCAAAGATTGAAATGTGAA...CTCACGTCTGATGTCCTGAAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAGCTGGGGCAGATGGTTaGCACACATGGATGCCTGTG +
Preference number: 5 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIAGADG*HTWMPV
Trigger: CACAGGCATCCATGTGTGCAAACCATCTGCCCCAGC...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS GCA 90 bp TCCTCTGCCAAATGGGAAAAGAGGTTACTGTCACTATCAACAGGATaGTGGAGGGCCTGGAAGAAGCAAAAAGGTGCGCTCCACTCTGCC +
Preference number: 5 (lower is better)
Translates to: SSAKWEKRLLSLSTG*WRAWKKQKGALHSA
Trigger: GGCAGAGTGGAGCGCACCTTTTTGCTTCTTCCAGGCCCTCCAGCATCCTGTTGATAGTGACAGTAACCTCTTTTCCCATTTGGCAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557926.1
CDS CCA 90 bp TCTGCCAAATGGGAAAAGAGGTTACTGTCACTATCAACAGGATGCTaGAGGGCCTGGAAGAAGCAAAAAGGTGCGCTCCACTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: SAKWEKRLLSLSTGC*RAWKKQKGALHSAC
Trigger: GCAGGCAGAGTGGAGCGCACCTTTTTGCTTCTTCCAGGCCCTCCAGCATCCTGTTGATAGTGACAGTAACCTCTTTTCCCATTTGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557926.1
CDS-3UTR CAA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGGAGGCCCACAAACTaGCCTTCTTTGGGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: PGTLASAFLRNIPVQISRGRPTN*PSLGSK
Trigger: CTTCGACCCCAAAGAAGGCAAGTTTGTGGGCCTCCC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCCTCAGAGCCATGCTaGGCAGCCTTCATTCCATGC +
Preference number: 5 (lower is better)
Translates to: QRPGTLASAFLRNIPVQISSEPC*AAFIPC
Trigger: GCATGGAATGAAGGCTGCCAAGCATGGCTCTGAGGA...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGAAAGAGGAGTTGGGCTaGCTCTGTGGTGGAGGGCCT +
Preference number: 5 (lower is better)
Translates to: PGTLASAFLRNIPVQISRKEELG*LCGGGP
Trigger: AGGCCCTCCACCACAGAGCAAGCCCAACTCCTCTTT...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATAAAGAGGAGTTGGGCTaGCTCTGTGGTGGAGGGCCT +
Preference number: 5 (lower is better)
Translates to: RGQERWPLRFLEISLCKYKEELG*LCGGGP
Trigger: AGGCCCTCCACCACAGAGCAAGCCCAACTCCTCTTT...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCGGTCGGAAAGAGGAGTaGGGCTTGCTCTGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVGRKEE*GLLCGG
Trigger: TCCACCACAGAGCAAGCCCAACTCCTCTTTCCGACC...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCTCATTCAGCCTGACTaGGGAGACGATGTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCLIQPD*GDDVCE
Trigger: CTCACAGACATCGTCTCCCAAGTCAGGCTGAATGAG...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CAGGCCATTCACAGTTCTGGGCGGGGAGGGGCTGTACAGGTGGGACTGCACCTTTTCACATTTCAATCTTaGGAGAGAATACTGAGAGGA +
Preference number: 5 (lower is better)
Translates to: QAIHSSGRGGAVQVGLHLFTFQS*ERILRG
Trigger: TCCTCTCAGTATTCTCTCCAAAGATTGAAATGTGAA...AAGGTGCAGTCCCACCTGTACAGCCCCTCCCCGCCCAGAACTGTGAATGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAGCCTTTTCTACTGTGTaGGCTGCAGAGGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIAFSTV*AAEARN
Trigger: GTTCCTGGCCTCTGCAGCCAACACAGTAGAAAAGGC...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCTCTTTCACTCAGAAATaGTCCCCTCACTCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCSFTQK*SPHSLP
Trigger: GGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGA...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS CCA 90 bp TACTCGCCTTACGTAGGCCTCGACATTTTTGTAGATGACAAGGGATaGATTAATTCACCTCTGCCAGCTTCTCCAGGCACAGTGAGGGGG +
Preference number: 5 (lower is better)
Translates to: YSPYVGLDIFVDDKG*INSPLPASPGTVRG
Trigger: CCCCCTCACTGTGCCTGGAGAAGCTGGCAGAGGTGAATTAATCCATCCCTTGTCATCTACAAAAATGTCGAGGCCTACGTAAGGCGAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560806.6
CDS CCA 90 bp CTTTGGGATTTCTCCATTAAATCCTCAGGCATCGACCTGCTCGTTTaGGGCGCCGAGCTGCTCCAACGTTGCTTGGCAATTTTGATATCG +
Preference number: 5 (lower is better)
Translates to: LWDFSIKSSGIDLLV*GAELLQRCLAILIS
Trigger: CGATATCAAAATTGCCAAGCAACGTTGGAGCAGCTCGGCGCCCCAAACGAGCAGGTCGATGCCTGAGGATTTAATGGAGAAATCCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561230.5
CDS CCA 90 bp TCGGCCTCCTGCTGCCCCTGGACTAGGCAAATCCAGCTTTTCCTATaGCCACACACTTGGGAACAAATACTGACAGAAATGGGAAACAAC +
Preference number: 5 (lower is better)
Translates to: SASCCPWTRQIQLFL*PHTWEQILTEMGNN
Trigger: GTTGTTTCCCATTTCTGTCAGTATTTGTTCCCAAGTGTGTGGCCATAGGAAAAGCTGGATTTGCCTAGTCCAGGGGCAGCAGGAGGCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557926.1
CDS CCA 90 bp AAAGAGGAGTTGGGCCTCTCTCTATCAGTCTCCTCCTCTGCCAAATaGGAAAAGAGGTTACTGTCACTATCAACAGGATGCTGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: KEELGLSLSVSSSAK*EKRLLSLSTGCWRA
Trigger: GGCCCTCCAGCATCCTGTTGATAGTGACAGTAACCTCTTTTCCCATTTGGCAGAGGAGGAGACTGATAGAGAGAGGCCCAACTCCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557926.1
CDS-3UTR CAA 90 bp CAATGGGTCCCTGATGACCTGGTTATTGAGATAAACTTGAAAGGTAACACAGTTGGAAGACCTGGGACCTaGCTGGGCCAGTCCTCCGCA +
Preference number: 5 (lower is better)
Translates to: QWVPDDLVIEINLKGNTVGRPGT*LGQSSA
Trigger: TGCGGAGGACTGGCCCAGCAAGGTCCCAGGTCTTCC...AACTGTGTTACCTTTCAAGTTTATCTCAATAACCAGGTCATCAGGGACCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGGGAGGCCCACAAACTaGCCTTCTTTGGGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: NIPVQISRGHPVERGLHLGRPTN*PSLGSK
Trigger: CTTCGACCCCAAAGAAGGCAAGTTTGTGGGCCTCCC...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTCGGCCACGCAGGGTGTaGGAGCTGATGACTGACAAC +
Preference number: 5 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSRPRRV*ELMTDN
Trigger: GTTGTCAGTCATCAGCTCCAACACCCTGCGTGGCCG...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATTCCTCAGAGCCATGCTaGGCAGCCTTCATTCCATGC +
Preference number: 5 (lower is better)
Translates to: RGQERWPLRFLEISLCKYSSEPC*AAFIPC
Trigger: GCATGGAATGAAGGCTGCCAAGCATGGCTCTGAGGA...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGTCCTCAGAGCCATGCTaGGCAGCCTTCATTCCATGC +
Preference number: 5 (lower is better)
Translates to: PGTLASAFLRNIPVQISRSSEPC*AAFIPC
Trigger: GCATGGAATGAAGGCTGCCAAGCATGGCTCTGAGGA...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGGTCGGAAAGAGGAGTaGGGCTTGCTCTGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: NIPVQISRGHPVERGLHLGRKEE*GLLCGG
Trigger: TCCACCACAGAGCAAGCCCAACTCCTCTTTCCGACC...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CAGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATAATCCTGAGCGCAGCCTaGAACTGCTCATGTGTCACA +
Preference number: 5 (lower is better)
Translates to: QRPGTLASAFLRNIPVQIILSAA*NCSCVT
Trigger: TGTGACACATGAGCAGTTCAAGGCTGCGCTCAGGAT...TATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGAGCCTCTTCATGGCTaGCACTGGGGAGTCACTGAA +
Preference number: 5 (lower is better)
Translates to: PGTLASAFLRNIPVQISREPLHG*HWGVTE
Trigger: TTCAGTGACTCCCCAGTGCAAGCCATGAAGAGGCTC...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGCCACCATATCTGCTATaGCACTCTGCCTGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: PGTLASAFLRNIPVQISRPPYLL*HSACCH
Trigger: GTGGCAGCAGGCAGAGTGCAATAGCAGATATGGTGG...CCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATACAAACTTGCCTTCTTaGGGGTCGAAGGAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: RGQERWPLRFLEISLCKYTNLPS*GSKEVW
Trigger: CCACACCTCCTTCGACCCCAAAGAAGGCAAGTTTGT...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCACAAACTTGCCTTCTTaGGGGTCGAAGGAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVTNLPS*GSKEVW
Trigger: CCACACCTCCTTCGACCCCAAAGAAGGCAAGTTTGT...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGGGAGGCCCACAAACTaGCCTTCTTTGGGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSGRPTN*PSLGSK
Trigger: CTTCGACCCCAAAGAAGGCAAGTTTGTGGGCCTCCC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCCTCATTCAGCCTGACTaGGGAGACGATGTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVLIQPD*GDDVCE
Trigger: CTCACAGACATCGTCTCCCAAGTCAGGCTGAATGAG...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCTCATTCAGCCTGACTaGGGAGACGATGTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: RGQERWPLRFLEISLCKYLIQPD*GDDVCE
Trigger: CTCACAGACATCGTCTCCCAAGTCAGGCTGAATGAG...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCAAGGGGTCTCTTTCACTCAGAAATaGTCCCCTCACTCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: ERWPLRFLEISLCKYQGVSFTQK*SPHSLP
Trigger: GGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGA...GACCCCTTGATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTTCCTCAGAGCCATGCTaGGCAGCCTTCATTCCATGC +
Preference number: 5 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSSSEPC*AAFIPC
Trigger: GCATGGAATGAAGGCTGCCAAGCATGGCTCTGAGGA...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGAGCCTCTTCATGGCTaGCACTGGGGAGTCACTGAA +
Preference number: 5 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSEPLHG*HWGVTE
Trigger: TTCAGTGACTCCCCAGTGCAAGCCATGAAGAGGCTC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGCCTTTTCTACTGTGTaGGCTGCAGAGGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSAFSTV*AAEARN
Trigger: GTTCCTGGCCTCTGCAGCCAACACAGTAGAAAAGGC...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp GATGCCTGTGACCTTGACATGATGGAAACCCGGAGGTGGTTCGCCTTCTCTCCCGTTATTGAGATAAACTaGAAAGGTAACACAGTTGCC +
Preference number: 5 (lower is better)
Translates to: DACDLDMMETRRWFAFSPVIEIN*KGNTVA
Trigger: GGCAACTGTGTTACCTTTCAAGTTTATCTCAATAAC...GGGAGAGAAGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS CCA 90 bp TGCCCCTGGACTAGGCAAATCCAGCTTTTCCTATGGCCACACACTTaGGAACAAATACTGACAGAAATGGGAAACAACACAACAGCCACA +
Preference number: 5 (lower is better)
Translates to: CPWTRQIQLFLWPHT*EQILTEMGNNTTAT
Trigger: TGTGGCTGTTGTGTTGTTTCCCATTTCTGTCAGTATTTGTTCCCAAGTGTGTGGCCATAGGAAAAGCTGGATTTGCCTAGTCCAGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557926.1
CDS-3UTR CAA 90 bp AGAGGCCAGGAACGCTGGCCTCTGCGTTTCTTAGAAATATCCCTGTGCAAATATCGTTTCTTCTTTTTCTaGCGGAACATGGTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: RGQERWPLRFLEISLCKYRFFFF*RNMVPS
Trigger: GGAAGGCACCATGTTCCGCAAGAAAAAGAAGAAACG...ATATTTGCACAGGGATATTTCTAAGAAACGCAGAGGCCAGCGTTCCTGGCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp AAATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTTCTTTCACTCAGAAATaGTCCCCTCACTCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: KYPCANIKGSSCRKGSPSSFTQK*SPHSLP
Trigger: GGGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGA...AGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGCGTTTCTTCTTTTTCTaGCGGAACATGGTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: NIPVQISRGHPVERGLHLRFFFF*RNMVPS
Trigger: GGAAGGCACCATGTTCCGCAAGAAAAAGAAGAAACG...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS-3UTR CAA 90 bp CCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCCGTTATTGAGATAAACTaGAAAGGTAACACAGTTGCC +
Preference number: 5 (lower is better)
Translates to: PPTPFFLFHSEIVPSLPAVIEIN*KGNTVA
Trigger: GGCAACTGTGTTACCTTTCAAGTTTATCTCAATAAC...GGCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp ACCACCGACCCCATTCTTTCTCTTTCACTCAGAAATTGTCCCCTCACTCCCTGCGTTATTGAGATAAACTaGAAAGGTAACACAGTTGCC +
Preference number: 5 (lower is better)
Translates to: TTDPILSLSLRNCPLTPCVIEIN*KGNTVA
Trigger: GGCAACTGTGTTACCTTTCAAGTTTATCTCAATAAC...GCAGGGAGTGAGGGGACAATTTCTGAGTGAAAGAGAAAGAATGGGGTCGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260404.8
ENST00000455577.6
ENST00000560346.5
CDS-3UTR CAA 90 bp AATATCCCTGTGCAAATATCAAGGGGTCATCCTGTAGAAAGGGGTCTCCATCTGTTCACATTTCAATCTTaGGAGAGAATACTGAGAGGA +
Preference number: 5 (lower is better)
Translates to: NIPVQISRGHPVERGLHLFTFQS*ERILRG
Trigger: TCCTCTCAGTATTCTCTCCAAAGATTGAAATGTGAA...CAGATGGAGACCCCTTTCTACAGGATGACCCCTTGATATTTGCACAGGGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558658.6
ENST00000560346.5
CDS CCA 72 bp GACGGGAGCAGCGCCCTCCCCCACCTGCCTGGACCGTaGCTGTCTCCAGAGTGTGGCCGCCGAGCCCCGCGC +
Preference number: 6 (lower is better)
Translates to: DGSSALPHLPGP*LSPECGRRAPR
Trigger: GCGCGGGGCTCGGCGGCCACACTCTGGAGACAGCCACGGTCCAGGCAGGTGGGGGAGGGCGCTGCTCCCGTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS CCA 72 bp GCGGAGCGGGAAGCCCAGGAACGCTCGAAGAGGTCGTaGGAGCCGGGCCCGCCCTCCGCGGGAGGGACCTCG +
Preference number: 6 (lower is better)
Translates to: AEREAQERSKRS*EPGPPSAGGTS
Trigger: CGAGGTCCCTCCCGCGGAGGGCGGGCCCGGCTCCCACGACCTCTTCGAGCGTTCCTGGGCTTCCCGCTCCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559617.5
ENST00000560684.6
CDS TCA 72 bp CAGGCGCTGGGAACCGCTCCGCGCCCGCCTCCCGACTaGACTCCTGGCTCAGGTGCAAGAGGCGGCAGGCTC +
Preference number: 6 (lower is better)
Translates to: QALGTAPRPPPD*TPGSGARGGRL
Trigger: GAGCCTGCCGCCTCTTGCACCTGAGCCAGGAGTTCAGTCGGGAGGCGGGCGCGGAGCGGTTCCCAGCGCCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560669.5
CDS CCA 72 bp GGGAACCGCTCCGCGCCCGCCTCCCGACTGAACTCCTaGCTCAGGTGCAAGAGGCGGCAGGCTCCTTGCGGG +
Preference number: 6 (lower is better)
Translates to: GNRSAPASRLNS*LRCKRRQAPCG
Trigger: CCCGCAAGGAGCCTGCCGCCTCTTGCACCTGAGCCAGGAGTTCAGTCGGGAGGCGGGCGCGGAGCGGTTCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560669.5
CDS CCA 72 bp TCCCGCGGGTGTTGCGACTGGCTGACGTCCAGGCGCTaGGAACCGCTCCGCGCCCGCCTCCCGACTGAACTC +
Preference number: 6 (lower is better)
Translates to: SRGCCDWLTSRR*EPLRARLPTEL
Trigger: GAGTTCAGTCGGGAGGCGGGCGCGGAGCGGTTCCCAGCGCCTGGACGTCAGCCAGTCGCAACACCCGCGGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560669.5
CDS CCA 72 bp ACATCAGGACGGGAGCAGCGCCCTCCCCCACCTGCCTaGACCGTGGCTGTCTCCAGAGTGTGGCCGCCGAGC +
Preference number: 6 (lower is better)
Translates to: TSGREQRPPPPA*TVAVSRVWPPS
Trigger: GCTCGGCGGCCACACTCTGGAGACAGCCACGGTCCAGGCAGGTGGGGGAGGGCGCTGCTCCCGTCCTGATGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS CAA 90 bp GCTGCGAGGCACCCTGAAACTCGGCGGGGCCCAGGGACTGTGCCTTaGCAGCCAGCCCATTGGGCAGGACCCGTGGGCTCTGTGGCTCGG +
Preference number: 6 (lower is better)
Translates to: AARHPETRRGPGTVP*QPAHWAGPVGSVAR
Trigger: CCGAGCCACAGAGCCCACGGGTCCTGCCCAATGGGCTGGCTGCAAAGGCACAGTCCCTGGGCCCCGCCGAGTTTCAGGGTGCCTCGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000559901.1
ENST00000560346.5
ENST00000560669.5
CDS GCA 72 bp AGGACCCGTGGGCTCTGTGGCTCGGGCCACGGCATCTaGTTGTGGCCTGCTGGTGTGCCCCCGTTGCAGCTG +
Preference number: 6 (lower is better)
Translates to: RTRGLCGSGHGI*LWPAGVPPLQL
Trigger: CAGCTGCAACGGGGGCACACCAGCAGGCCACAAGCAGATGCCGTGGCCCGAGCCACAGAGCCCACGGGTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000559901.1
ENST00000560346.5
ENST00000560669.5
CDS GCA 72 bp CGAGGCACCCTGAAACTCGGCGGGGCCCAGGGACTGTaGCTTTGCAGCCAGCCCATTGGGCAGGACCCGTGG +
Preference number: 6 (lower is better)
Translates to: RGTLKLGGAQGL*LCSQPIGQDPW
Trigger: CCACGGGTCCTGCCCAATGGGCTGGCTGCAAAGGCACAGTCCCTGGGCCCCGCCGAGTTTCAGGGTGCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000559901.1
ENST00000560346.5
ENST00000560669.5
CDS GCA 72 bp CAGTCCTCCGCAGGCCTCGTTCACTGGCATCGCAGATaGACGCTCCAGAGCCGCGGGCCGACTCTCCCGGAC +
Preference number: 6 (lower is better)
Translates to: QSSAGLVHWHRR*TLQSRGPTLPD
Trigger: GTCCGGGAGAGTCGGCCCGCGGCTCTGGAGCGTGCATCTGCGATGCCAGTGAACGAGGCCTGCGGAGGACTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558106.5
CDS CCA 72 bp TGCAGCCAGCCCATTGGGCAGGACCCGTGGGCTCTGTaGCTCGGGCCACGGCATCTGCTTGTGGCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: CSQPIGQDPWAL*LGPRHLLVACW
Trigger: CCAGCAGGCCACAAGCAGATGCCGTGGCCCGAGCCACAGAGCCCACGGGTCCTGCCCAATGGGCTGGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000559901.1
ENST00000560346.5
ENST00000560669.5
CDS CAA 72 bp ACCCGTGGGCTCTGTGGCTCGGGCCACGGCATCTGCTaGTGGCCTGCTGGTGTGCCCCCGTTGCAGCTGAGG +
Preference number: 6 (lower is better)
Translates to: TRGLCGSGHGIC*WPAGVPPLQLR
Trigger: CCTCAGCTGCAACGGGGGCACACCAGCAGGCCACAAGCAGATGCCGTGGCCCGAGCCACAGAGCCCACGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000559901.1
ENST00000560346.5
ENST00000560669.5
CDS TCA 72 bp CAGGCACCCAGCTGCAGACAGCGCTGCGAGGCACCCTaGAACTCGGCGGGGCCCAGGGACTGTGCCTTTGCA +
Preference number: 6 (lower is better)
Translates to: QAPSCRQRCEAP*NSAGPRDCAFA
Trigger: TGCAAAGGCACAGTCCCTGGGCCCCGCCGAGTTTCAGGGTGCCTCGCAGCGCTGTCTGCAGCTGGGTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000559901.1
ENST00000560346.5
ENST00000560669.5
CDS TCA 72 bp AATGTAGCAAGTGTTCCCGCGGGTGTTGCGACTGGCTaGCGTCCAGGCGCTGGGAACCGCTCCGCGCCCGCC +
Preference number: 6 (lower is better)
Translates to: NVASVPAGVATG*RPGAGNRSAPA
Trigger: GGCGGGCGCGGAGCGGTTCCCAGCGCCTGGACGTCAGCCAGTCGCAACACCCGCGGGAACACTTGCTACATT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560669.5
CDS GCA 72 bp GGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTGGTaGTTGTCTCTAGCCCAGGAAGCGGCACTCCCTGGG +
Preference number: 6 (lower is better)
Translates to: GQRGPAFSTAGW*LSLAQEAALPG
Trigger: CCCAGGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260404.8
CDS GCA 72 bp GCGCTGCCCCGCACCACTGTCTTCATGGGCTGGAGCTaGACCCGTGTGATTCGCGAAGGGTCCACCACGGGC +
Preference number: 6 (lower is better)
Translates to: ALPRTTVFMGWS*TRVIREGSTTG
Trigger: GCCCGTGGTGGACCCTTCGCGAATCACACGGGTGCAGCTCCAGCCCATGAAGACAGTGGTGCGGGGCAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558055.5
ENST00000558106.5
ENST00000558658.6
ENST00000559139.5
ENST00000559617.5
ENST00000560346.5
ENST00000560669.5
ENST00000561230.5
CDS GCA 72 bp GGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTGGTaGTTGTCTCTAGCCCAGGAAGCGGCACTCCCTGCC +
Preference number: 6 (lower is better)
Translates to: GQRGPAFSTAGW*LSLAQEAALPA
Trigger: GGCAGGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS CCA 72 bp TCCGAAGTGGTCAGAGGGCTGAAGGTCCCCACCGGCTaGTCCGAGGGCAAGGACTGGGCCTTGGCCACCAGG +
Preference number: 6 (lower is better)
Translates to: SEVVRGLKVPTG*SEGKDWALATR
Trigger: CCTGGTGGCCAAGGCCCAGTCCTTGCCCTCGGACCAGCCGGTGGGGACCTTCAGCCCTCTGACCACTTCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000557926.1
ENST00000558658.6
ENST00000560346.5
CDS CCA 72 bp GTGCTAGTGGGCCGGCTTAGTCACCTGGATGGCTGCTaGCGGCTCCTGGCACATCAGGACGGGAGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: VLVGRLSHLDGC*RLLAHQDGSSA
Trigger: GGCGCTGCTCCCGTCCTGATGTGCCAGGAGCCGCCAGCAGCCATCCAGGTGACTAAGCCGGCCCACTAGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS CAA 72 bp CACCCTGAAACTCGGCGGGGCCCAGGGACTGTGCCTTaGCAGCCAGCCCATTGGGCAGGACCCGTGGGCTCT +
Preference number: 6 (lower is better)
Translates to: HPETRRGPGTVP*QPAHWAGPVGS
Trigger: AGAGCCCACGGGTCCTGCCCAATGGGCTGGCTGCAAAGGCACAGTCCCTGGGCCCCGCCGAGTTTCAGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000559901.1
ENST00000560346.5
ENST00000560669.5
CDS CAA 90 bp GACTGTGCCCGCCGCCGGCTGGTGGGGCTGCGGCCACGCAGGGTGTaGGAGCTGATGACTGACAACTTCTGGATGTCGTTGAGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: DCARRRLVGLRPRRV*ELMTDNFWMSLSSP
Trigger: GGGGCTGCTCAACGACATCCAGAAGTTGTCAGTCATCAGCTCCAACACCCTGCGTGGCCGCAGCCCCACCAGCCGGCGGCGGGCACAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558055.5
ENST00000558106.5
ENST00000558658.6
ENST00000560346.5
ENST00000560669.5
CDS CAA 90 bp CCTTCTGGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTGGTGCTaGTCTCTAGCCCAGGAAGCGGCACTCCCTGCCCAGGCCAGCCTA +
Preference number: 6 (lower is better)
Translates to: PSGQRGPAFSTAGWC*SLAQEAALPAQASL
Trigger: TAGGCTGGCCTGGGCAGGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS GCA 72 bp GGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTGGTaGTTGTCTCTAGCCCAGGAAGCGGCACTCCCTGGT +
Preference number: 6 (lower is better)
Translates to: GQRGPAFSTAGW*LSLAQEAALPG
Trigger: ACCAGGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441369.6
ENST00000558658.6
CDS CCA 72 bp AGGCCGTGGGGGTCAGTGCGCTCAGACTGGGGGCTCTaGAGGTACATGTCTGGGTCGGTGGCCCAGTGCTCA +
Preference number: 6 (lower is better)
Translates to: RPWGSVRSDWGL*RYMSGSVAQCS
Trigger: TGAGCACTGGGCCACCGACCCAGACATGTACCTCCAGAGCCCCCAGTCTGAGCGCACTGACCCCCACGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000560346.5
ENST00000560669.5
CDS CCA 72 bp CCTGTCTGCAGCAGGAAGGGGTGGTCTAGGAGCTCCTaGGCTGTGGCTCTCTCTTGGGGGTCCCGCACCAGC +
Preference number: 6 (lower is better)
Translates to: PVCSRKGWSRSS*AVALSWGSRTS
Trigger: GCTGGTGCGGGACCCCCAAGAGAGAGCCACAGCCCAGGAGCTCCTAGACCACCCCTTCCTGCTGCAGACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000557808.1
ENST00000558658.6
ENST00000560346.5
CDS CCA 72 bp GGCAAATGTAGCAAGTGTTCCCGCGGGTGTTGCGACTaGCTGACGTCCAGGCGCTGGGAACCGCTCCGCGCC +
Preference number: 6 (lower is better)
Translates to: GKCSKCSRGCCD*LTSRRWEPLRA
Trigger: GGCGCGGAGCGGTTCCCAGCGCCTGGACGTCAGCCAGTCGCAACACCCGCGGGAACACTTGCTACATTTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560669.5
CDS TCA 72 bp GACTCCTCACCCGCACTGGGCCTCTCTCTTAGGCGCTaGGGAGAGGGAAGACCTGGGACCTTGCTGGGCCAG +
Preference number: 6 (lower is better)
Translates to: DSSPALGLSLRR*GEGRPGTLLGQ
Trigger: CTGGCCCAGCAAGGTCCCAGGTCTTCCCTCTCCTCAGCGCCTAAGAGAGAGGCCCAGTGCGGGTGAGGAGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558055.5
ENST00000558106.5
ENST00000558183.6
ENST00000558658.6
ENST00000558878.6
ENST00000559139.5
ENST00000559617.5
ENST00000560346.5
ENST00000560669.5
ENST00000560684.6
ENST00000560806.6
ENST00000561230.5
CDS TCA 72 bp TCTGCTTGTGGCCTGCTGGTGTGCCCCCGTTGCAGCTaGGGTAGAGGCCGTGGGGGTCAGTGCGCTCAGACT +
Preference number: 6 (lower is better)
Translates to: SACGLLVCPRCS*GRGRGGQCAQT
Trigger: AGTCTGAGCGCACTGACCCCCACGGCCTCTACCTCAGCTGCAACGGGGGCACACCAGCAGGCCACAAGCAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000559901.1
ENST00000560346.5
ENST00000560669.5
CDS TCA 72 bp TCTGGGGGCTGCTGGTATCCGAAGTGGTCAGAGGGCTaGAGGTCCCCACCGGCTGGTCCGAGGGCAAGGACT +
Preference number: 6 (lower is better)
Translates to: SGGCWYPKWSEG*RSPPAGPRART
Trigger: AGTCCTTGCCCTCGGACCAGCCGGTGGGGACCTTCAGCCCTCTGACCACTTCGGATACCAGCAGCCCCCAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000560346.5
CDS GCA 72 bp TGCTCCTTCTGGGCAGCGGGGTCCTGCGTTCTCCACTaGAGGCTGGTGCTTGTCTCTAGCCCAGGAAGCGGC +
Preference number: 6 (lower is better)
Translates to: CSFWAAGSCVLH*RLVLVSSPGSG
Trigger: GCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGAAGGAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558183.6
ENST00000558658.6
ENST00000558878.6
ENST00000560346.5
ENST00000561230.5
CDS GCA 72 bp GCAGCCCCGAGATGTAGCCATCCACAGGCATCGCGCTaGCCCGCACCACTGTCTTCATGGGCTGGAGCTGCA +
Preference number: 6 (lower is better)
Translates to: AAPRCSHPQASR*PAPLSSWAGAA
Trigger: TGCAGCTCCAGCCCATGAAGACAGTGGTGCGGGGCAGCGCGATGCCTGTGGATGGCTACATCTCGGGGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558055.5
ENST00000558106.5
ENST00000558658.6
ENST00000559139.5
ENST00000559617.5
ENST00000560346.5
ENST00000560669.5
ENST00000561230.5
CDS GCA 72 bp TCAGTGCTAGTGGGCCGGCTTAGTCACCTGGATGGCTaGTGGCGGCTCCTGGCACATCAGGACGGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: SVLVGRLSHLDG*WRLLAHQDGSS
Trigger: GCTGCTCCCGTCCTGATGTGCCAGGAGCCGCCAGCAGCCATCCAGGTGACTAAGCCGGCCCACTAGCACTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455577.6
CDS GCA 72 bp GGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTGGTaGTTGTCTCTAGCCCAGGAAGCGGCACTCCCTTCA +
Preference number: 6 (lower is better)
Translates to: GQRGPAFSTAGW*LSLAQEAALPS
Trigger: TGAAGGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558183.6
ENST00000558878.6
CDS GCA 72 bp GGAAGGGCTGCCTGCCGGGCTCAGGGTGAGCCTCCCTaGTGTCCTTCCTACCCTTGCCCTAGAGAAGCCAGA +
Preference number: 6 (lower is better)
Translates to: GRAACRAQGEPP*CPSYPCPREAR
Trigger: TCTGGCTTCTCTAGGGCAAGGGTAGGAAGGACAGCAGGGAGGCTCACCCTGAGCCCGGCAGGCAGCCCTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561230.5
CDS GCA 72 bp GGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTGGTaGTTGTCTCTAGCCCAGGAAGCGGCACTCCTTTGG +
Preference number: 6 (lower is better)
Translates to: GQRGPAFSTAGW*LSLAQEAALLW
Trigger: CCAAAGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561230.5
CDS CCA 72 bp TCTGGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTaGTGCTTGTCTCTAGCCCAGGAAGCGGCACTCCCT +
Preference number: 6 (lower is better)
Translates to: SGQRGPAFSTAG*CLSLAQEAALP
Trigger: AGGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000455577.6
ENST00000558183.6
ENST00000558658.6
ENST00000558878.6
ENST00000560346.5
CDS CCA 72 bp GCCTTCCGCCTCTTCCTCGCGACTCCTCACCCGCACTaGGCCTCTCTCTTAGGCGCTGAGGAGAGGGAAGAC +
Preference number: 6 (lower is better)
Translates to: AFRLFLATPHPH*ASLLGAEERED
Trigger: GTCTTCCCTCTCCTCAGCGCCTAAGAGAGAGGCCCAGTGCGGGTGAGGAGTCGCGAGGAAGAGGCGGAAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558055.5
ENST00000558106.5
ENST00000558183.6
ENST00000558658.6
ENST00000558878.6
ENST00000559139.5
ENST00000559617.5
ENST00000560346.5
ENST00000560669.5
ENST00000560684.6
ENST00000560806.6
ENST00000561230.5
CDS CCA 72 bp GTCCGAGGGCAAGGACTGGGCCTTGGCCACCAGGCTTaGGGGGTTGTCTTTCTGCGGCGGTCGGAAAGAGGA +
Preference number: 6 (lower is better)
Translates to: VRGQGLGLGHQA*GVVFLRRSERG
Trigger: TCCTCTTTCCGACCGCCGCAGAAAGACAACCCCCCAAGCCTGGTGGCCAAGGCCCAGTCCTTGCCCTCGGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000557926.1
ENST00000558658.6
ENST00000560346.5
CDS CAA 90 bp CCTTCTGGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTGGTGCTaGTCTCTAGCCCAGGAAGCGGCACTCCCTGGGCATCTTGCTGTG +
Preference number: 6 (lower is better)
Translates to: PSGQRGPAFSTAGWC*SLAQEAALPGHLAV
Trigger: CACAGCAAGATGCCCAGGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260404.8
CDS CCA 72 bp GGCAGGACTGTGGCCGGGCCTCCTCAGAGCCATGCTTaGCAGCCTTCATTCCATGCCTATTGGTGCCCGTGG +
Preference number: 6 (lower is better)
Translates to: GRTVAGPPQSHA*QPSFHAYWCPW
Trigger: CCACGGGCACCAATAGGCATGGAATGAAGGCTGCCAAGCATGGCTCTGAGGAGGCCCGGCCACAGTCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000559901.1
ENST00000560346.5
ENST00000560669.5
CDS CCA 72 bp TCTGGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTaGTGCTTGTCTCTAGCCCAGGAAGCGGCACTCCTT +
Preference number: 6 (lower is better)
Translates to: SGQRGPAFSTAG*CLSLAQEAALL
Trigger: AAGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561230.5
CDS CAA 72 bp TGCACCCGTGTGATTCGCGAAGGGTCCACCACGGGCTaGGGGCGCCGCAGTGTGTCCAGGATGTTCTGCCAT +
Preference number: 6 (lower is better)
Translates to: CTRVIREGSTTG*GRRSVSRMFCH
Trigger: ATGGCAGAACATCCTGGACACACTGCGGCGCCCCAAGCCCGTGGTGGACCCTTCGCGAATCACACGGGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558055.5
ENST00000558106.5
ENST00000558183.6
ENST00000558658.6
ENST00000559139.5
ENST00000559617.5
ENST00000560346.5
ENST00000560669.5
ENST00000560684.6
ENST00000561230.5
CDS CAA 90 bp CCTTCTGGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTGGTGCTaGTCTCTAGCCCAGGAAGCGGCACTCCCTGGTAGGGAGAAGAAC +
Preference number: 6 (lower is better)
Translates to: PSGQRGPAFSTAGWC*SLAQEAALPGREKN
Trigger: GTTCTTCTCCCTACCAGGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441369.6
ENST00000558658.6
CDS CAA 90 bp TGCTCATGTGTCACAACACCTGTGTCCTCACCAGCCAGGGCACCCTaGGCAACCGTGGGGTCCTGGGGCAGGTACAGGTTGCTGGTGCTG +
Preference number: 6 (lower is better)
Translates to: CSCVTTPVSSPARAP*ATVGSWGRYRLLVL
Trigger: CAGCACCAGCAACCTGTACCTGCCCCAGGACCCCACGGTTGCCAAGGGTGCCCTGGCTGGTGAGGACACAGGTGTTGTGACACATGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000560346.5
CDS GCA 72 bp ACCAGGCAGGACTGTGGCCGGGCCTCCTCAGAGCCATaGTTGGCAGCCTTCATTCCATGCCTATTGGTGCCC +
Preference number: 6 (lower is better)
Translates to: TRQDCGRASSEP*LAAFIPCLLVP
Trigger: GGGCACCAATAGGCATGGAATGAAGGCTGCCAAGCATGGCTCTGAGGAGGCCCGGCCACAGTCCTGCCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000559901.1
ENST00000560346.5
ENST00000560669.5
CDS GCA 72 bp CCAGCCCGGGAGGACTCCAGTCAGCTCGGACAAGACTaGCCTTCTGTCCCAACACCTCCAGAGGACACACAC +
Preference number: 6 (lower is better)
Translates to: PAREDSSQLGQD*PSVPTPPEDTH
Trigger: GTGTGTGTCCTCTGGAGGTGTTGGGACAGAAGGGCAGTCTTGTCCGAGCTGACTGGAGTCCTCCCGGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS TCA 72 bp GGGGCTGCGGCCACGCAGGGTGTTGGAGCTGATGACTaGCAACTTCTGGATGTCGTTGAGCAGCCCCGAGAT +
Preference number: 6 (lower is better)
Translates to: GAAATQGVGADD*QLLDVVEQPRD
Trigger: ATCTCGGGGCTGCTCAACGACATCCAGAAGTTGTCAGTCATCAGCTCCAACACCCTGCGTGGCCGCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558055.5
ENST00000558106.5
ENST00000558658.6
ENST00000559139.5
ENST00000559617.5
ENST00000560346.5
ENST00000560669.5
CDS CCA 72 bp GTAGGTGGCAGGCATACTTGGGGTGGGCTCAGCAGGTaGAGGTCTGCTTTCGGTAGAGCTGGATCAGGGGCA +
Preference number: 6 (lower is better)
Translates to: VGGRHTWGGLSR*RSAFGRAGSGA
Trigger: TGCCCCTGATCCAGCTCTACCGAAAGCAGACCTCCACCTGCTGAGCCCACCCCAAGTATGCCTGCCACCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000557808.1
ENST00000558658.6
ENST00000560346.5
CDS CCA 72 bp GACCCCAGAAGCCACTCCTTTACCGAAACATCCCCGTaGGAGATGAGTTCAGAGCCAGCCCGGGAGGACTCC +
Preference number: 6 (lower is better)
Translates to: DPRSHSFTETSP*EMSSEPAREDS
Trigger: GGAGTCCTCCCGGGCTGGCTCTGAACTCATCTCCCACGGGGATGTTTCGGTAAAGGAGTGGCTTCTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455577.6
ENST00000560346.5
CDS CAA 90 bp CCTTCTGGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTGGTGCTaGTCTCTAGCCCAGGAAGCGGCACTCCCTTCAGGCAAAATAGAA +
Preference number: 6 (lower is better)
Translates to: PSGQRGPAFSTAGWC*SLAQEAALPSGKIE
Trigger: TTCTATTTTGCCTGAAGGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558183.6
ENST00000558878.6
CDS CAA 90 bp CCTTCTGGGCAGCGGGGTCCTGCGTTCTCCACTGCAGGCTGGTGCTaGTCTCTAGCCCAGGAAGCGGCACTCCTTTGGGATTTCTCCATT +
Preference number: 6 (lower is better)
Translates to: PSGQRGPAFSTAGWC*SLAQEAALLWDFSI
Trigger: AATGGAGAAATCCCAAAGGAGTGCCGCTTCCTGGGCTAGAGACAAGCACCAGCCTGCAGTGGAGAACGCAGGACCCCGCTGCCCAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561230.5
CDS GCA 72 bp CCCTGGTCCACCACCATCCTGAGCGCAGCCTTGAACTaGTCATGTGTCACAACACCTGTGTCCTCACCAGCC +
Preference number: 6 (lower is better)
Translates to: PWSTTILSAALN*SCVTTPVSSPA
Trigger: GGCTGGTGAGGACACAGGTGTTGTGACACATGAGCAGTTCAAGGCTGCGCTCAGGATGGTGGTGGACCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000560346.5
CDS GCA 72 bp GCCTGGAAGAAGCAAAAAGGTGCGCTCCACTCTGCCTaGCAAGAAATGTCACCACGGGGGCTCCCTTCACCC +
Preference number: 6 (lower is better)
Translates to: AWKKQKGALHSA*QEMSPRGLPSP
Trigger: GGGTGAAGGGAGCCCCCGTGGTGACATTTCTTGGCAGGCAGAGTGGAGCGCACCTTTTTGCTTCTTCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557926.1
CDS GCA 72 bp GAGGGCCTGGAAGAAGCAAAAAGGTGCGCTCCACTCTaGCTGCCAAGAAATGTCACCACGGGGGCTCCCTTC +
Preference number: 6 (lower is better)
Translates to: EGLEEAKRCAPL*LPRNVTTGAPF
Trigger: GAAGGGAGCCCCCGTGGTGACATTTCTTGGCAGGCAGAGTGGAGCGCACCTTTTTGCTTCTTCCAGGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557926.1
CDS GCA 72 bp CATTATGGCAAATGTAGCAAGTGTTCCCGCGGGTGTTaGGACTGGCTGACGTCCAGGCGCTGGGAACCGCTC +
Preference number: 6 (lower is better)
Translates to: HYGKCSKCSRGC*DWLTSRRWEPL
Trigger: GAGCGGTTCCCAGCGCCTGGACGTCAGCCAGTCGCAACACCCGCGGGAACACTTGCTACATTTGCCATAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560669.5
CDS GCA 72 bp TTGCCTTCTTTGGGGTCGAAGGAGGTGTGGACACGGTaGTGGAAGTTCTGTGGCGCTGAGATCTCAGGGCGT +
Preference number: 6 (lower is better)
Translates to: LPSLGSKEVWTR*WKFCGAEISGR
Trigger: ACGCCCTGAGATCTCAGCGCCACAGAACTTCCAGCACCGTGTCCACACCTCCTTCGACCCCAAAGAAGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558055.5
ENST00000558106.5
ENST00000558183.6
ENST00000558658.6
ENST00000558878.6
ENST00000559139.5
ENST00000559617.5
ENST00000560346.5
ENST00000560669.5
ENST00000560684.6
ENST00000561230.5
CDS CCA 72 bp CCTTCTTTGGGGTCGAAGGAGGTGTGGACACGGTGCTaGAAGTTCTGTGGCGCTGAGATCTCAGGGCGTTTC +
Preference number: 6 (lower is better)
Translates to: PSLGSKEVWTRC*KFCGAEISGRF
Trigger: GAAACGCCCTGAGATCTCAGCGCCACAGAACTTCCAGCACCGTGTCCACACCTCCTTCGACCCCAAAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558055.5
ENST00000558106.5
ENST00000558183.6
ENST00000558658.6
ENST00000558878.6
ENST00000559139.5
ENST00000559617.5
ENST00000560346.5
ENST00000560669.5
ENST00000560684.6
ENST00000561230.5
CDS CCA 72 bp ATATCCACCTGCAGGAGGAAAATGTCCCTGACCCCATaGCCAGACCCTGGCCCATTGGTAGCTGCGTTCTGG +
Preference number: 6 (lower is better)
Translates to: ISTCRRKMSLTP*PDPGPLVAAFW
Trigger: CCAGAACGCAGCTACCAATGGGCCAGGGTCTGGCCATGGGGTCAGGGACATTTTCCTCCTGCAGGTGGATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557808.1
CDS TCA 72 bp GTCACCTGCCCTGTGGCCAGTTACTGCCTGCATGAGTaGCCACTGCCTATAGGGACACAGCTGTCAGTCACT +
Preference number: 6 (lower is better)
Translates to: VTCPVASYCLHE*PLPIGTQLSVT
Trigger: AGTGACTGACAGCTGTGTCCCTATAGGCAGTGGTCACTCATGCAGGCAGTAACTGGCCACAGGGCAGGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557808.1
CDS CCA 72 bp CCCACAAACTTGCCTTCTTTGGGGTCGAAGGAGGTGTaGACACGGTGCTGGAAGTTCTGTGGCGCTGAGATC +
Preference number: 6 (lower is better)
Translates to: PTNLPSLGSKEV*TRCWKFCGAEI
Trigger: GATCTCAGCGCCACAGAACTTCCAGCACCGTGTCCACACCTCCTTCGACCCCAAAGAAGGCAAGTTTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558055.5
ENST00000558106.5
ENST00000558183.6
ENST00000558658.6
ENST00000558878.6
ENST00000559139.5
ENST00000559617.5
ENST00000560346.5
ENST00000560669.5
ENST00000560684.6
ENST00000561230.5
CDS CCA 72 bp GAGGGGGAGCATCTGTTCCTGCTCACGGAGGAGCTTTaGATATTTCTCACGGTCGTCACTCAGGAAGAGCCT +
Preference number: 6 (lower is better)
Translates to: EGEHLFLLTEEL*IFLTVVTQEEP
Trigger: AGGCTCTTCCTGAGTGACGACCGTGAGAAATATCCAAAGCTCCTCCGTGAGCAGGAACAGATGCTCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560806.6
CDS CAA 90 bp AGCGTGGACCTTGGGCTTGGTGTTCCTAAGTCCCGGCTTGTGACCTaGGCCTACTCGCCTTACGTAGGCCTCGACATTTTTGTAGATGAC +
Preference number: 6 (lower is better)
Translates to: SVDLGLGVPKSRLVT*AYSPYVGLDIFVDD
Trigger: GTCATCTACAAAAATGTCGAGGCCTACGTAAGGCGAGTAGGCCAAGGTCACAAGCCGGGACTTAGGAACACCAAGCCCAAGGTCCACGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560806.6
CDS TCA 72 bp GGAGGTGTGGACACGGTGCTGGAAGTTCTGTGGCGCTaGGATCTCAGGGCGTTTCTTCTTTTTCTTGCGGAA +
Preference number: 6 (lower is better)
Translates to: GGVDTVLEVLWR*DLRAFLLFLAE
Trigger: TTCCGCAAGAAAAAGAAGAAACGCCCTGAGATCTCAGCGCCACAGAACTTCCAGCACCGTGTCCACACCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558055.5
ENST00000558106.5
ENST00000558183.6
ENST00000558658.6
ENST00000558878.6
ENST00000559139.5
ENST00000559617.5
ENST00000560346.5
ENST00000560669.5
ENST00000560684.6
ENST00000561230.5
CDS TCA 72 bp ACCAGGGACTTCCTCTTAGGGACGTCTTTGCTGATCTaGGCACAGAATCCGAAGTCCGAGAGCTTCACCCTG +
Preference number: 6 (lower is better)
Translates to: TRDFLLGTSLLI*AQNPKSESFTL
Trigger: CAGGGTGAAGCTCTCGGACTTCGGATTCTGTGCTCAGATCAGCAAAGACGTCCCTAAGAGGAAGTCCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260404.8
ENST00000441369.6
ENST00000453867.7
ENST00000455577.6
ENST00000542403.3
ENST00000558658.6
ENST00000560346.5
CDS GCA 72 bp TTTGGGATTTCTCCATTAAATCCTCAGGCATCGACCTaGTCGTTTGGGGCGCCGAGCTGCTCCAACGTTGCT +
Preference number: 6 (lower is better)
Translates to: FGISPLNPQAST*SFGAPSCSNVA
Trigger: AGCAACGTTGGAGCAGCTCGGCGCCCCAAACGAGCAGGTCGATGCCTGAGGATTTAATGGAGAAATCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558055.5
ENST00000561230.5
CDS CCA 72 bp TTCTCCATTAAATCCTCAGGCATCGACCTGCTCGTTTaGGGCGCCGAGCTGCTCCAACGTTGCTTGGCAATT +
Preference number: 6 (lower is better)
Translates to: FSIKSSGIDLLV*GAELLQRCLAI
Trigger: AATTGCCAAGCAACGTTGGAGCAGCTCGGCGCCCCAAACGAGCAGGTCGATGCCTGAGGATTTAATGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558055.5
ENST00000561230.5
CDS CAA 72 bp CTTGGGCTTGGTGTTCCTAAGTCCCGGCTTGTGACCTaGGCCTACTCGCCTTACGTAGGCCTCGACATTTTT +
Preference number: 6 (lower is better)
Translates to: LGLGVPKSRLVT*AYSPYVGLDIF
Trigger: AAAAATGTCGAGGCCTACGTAAGGCGAGTAGGCCAAGGTCACAAGCCGGGACTTAGGAACACCAAGCCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560806.6
CDS CAA 90 bp TCCTCCGCAGGCCTGGTAGGGAGAAGAACAGTTAGCCAGGATCTTTaGTCCTTCCAGGATCTGTACAGTCCGAAAGCCGCTGAGGGTAAA +
Preference number: 6 (lower is better)
Translates to: SSAGLVGRRTVSQDL*SFQDLYSPKAAEGK
Trigger: TTTACCCTCAGCGGCTTTCGGACTGTACAGATCCTGGAAGGACAAAAGATCCTGGCTAACTGTTCTTCTCCCTACCAGGCCTGCGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453867.7
CDS CAA 72 bp GGCCTGGTAGGGAGAAGAACAGTTAGCCAGGATCTTTaGTCCTTCCAGGATCTGTACAGTCCGAAAGCCGCT +
Preference number: 6 (lower is better)
Translates to: GLVGRRTVSQDL*SFQDLYSPKAA
Trigger: AGCGGCTTTCGGACTGTACAGATCCTGGAAGGACAAAAGATCCTGGCTAACTGTTCTTCTCCCTACCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453867.7
CDS CAA 90 bp AAGCGGCACTCCCTGGTAGGGAGAAGAACAGTTAGCCAGGATCTTTaGTCCTTCCAGGATCTGTACAGTCCGAAAGCCGCTGAGGGTAAA +
Preference number: 6 (lower is better)
Translates to: KRHSLVGRRTVSQDL*SFQDLYSPKAAEGK
Trigger: TTTACCCTCAGCGGCTTTCGGACTGTACAGATCCTGGAAGGACAAAAGATCCTGGCTAACTGTTCTTCTCCCTACCAGGGAGTGCCGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441369.6
ENST00000558658.6
CDS CAA 72 bp TCCCTGGTAGGGAGAAGAACAGTTAGCCAGGATCTTTaGTCCTTCCAGGATCTGTACAGTCCGAAAGCCGCT +
Preference number: 6 (lower is better)
Translates to: SLVGRRTVSQDL*SFQDLYSPKAA
Trigger: AGCGGCTTTCGGACTGTACAGATCCTGGAAGGACAAAAGATCCTGGCTAACTGTTCTTCTCCCTACCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441369.6
ENST00000558658.6
CDS GCA 72 bp AAATGGGAAAAGAGGTTACTGTCACTATCAACAGGATaGTGGAGGGCCTGGAAGAAGCAAAAAGGTGCGCTC +
Preference number: 6 (lower is better)
Translates to: KWEKRLLSLSTG*WRAWKKQKGAL
Trigger: GAGCGCACCTTTTTGCTTCTTCCAGGCCCTCCAGCATCCTGTTGATAGTGACAGTAACCTCTTTTCCCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557926.1
CDS CCA 72 bp TGCTGCCCCTGGACTAGGCAAATCCAGCTTTTCCTATaGCCACACACTTGGGAACAAATACTGACAGAAATG +
Preference number: 6 (lower is better)
Translates to: CCPWTRQIQLFL*PHTWEQILTEM
Trigger: CATTTCTGTCAGTATTTGTTCCCAAGTGTGTGGCCATAGGAAAAGCTGGATTTGCCTAGTCCAGGGGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557926.1
CDS CCA 72 bp TTGGGCCTCTCTCTATCAGTCTCCTCCTCTGCCAAATaGGAAAAGAGGTTACTGTCACTATCAACAGGATGC +
Preference number: 6 (lower is better)
Translates to: LGLSLSVSSSAK*EKRLLSLSTGC
Trigger: GCATCCTGTTGATAGTGACAGTAACCTCTTTTCCCATTTGGCAGAGGAGGAGACTGATAGAGAGAGGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557926.1
CDS CAA 90 bp CACCCTAAGGTCAACACTGTAGGAAAAGTCCACTATCTTCAAAGCTaGATTGTTCTTGTTACAATCATAGGGATCGTGGATTCTGAGCCC +
Preference number: 6 (lower is better)
Translates to: HPKVNTVGKVHYLQS*IVLVTIIGIVDSEP
Trigger: GGGCTCAGAATCCACGATCCCTATGATTGTAACAAGAACAATCAAGCTTTGAAGATAGTGGACTTTTCCTACAGTGTTGACCTTAGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441369.6
ENST00000453867.7