RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PAK5 (Homo sapiens)

Ensembl gene IDs: ENSG00000101349

Ensembl transcript IDs: ENST00000353224.10, ENST00000378423.5, ENST00000378429.3

Found 577 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTGTCAGTGGAGAGATGCCTGTTTAAGACACAAGAAGATGCCCTaGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGG +
Preference number: 1 (lower is better)
Translates to: GCQWRDACLRHKKMP*SVEPCRSSRCPTNW
Trigger: CCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACCAGGGCATCTTCTTGTGTCTTAAACAGGCATCTCTCCACTGACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR TCA 90 bp GTGGAGAGATGCCTGTTTAAGACACAAGAAGATGCCCTGGTCTGTTaGACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTA +
Preference number: 1 (lower is better)
Translates to: VERCLFKTQEDALVC*TLPVITLSHQLAGL
Trigger: TAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACCAGGGCATCTTCTTGTGTCTTAAACAGGCATCTCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR TCA 90 bp CTCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTaGGAAAGGGCACTGAGGGAAACATTGTGGTGTGCAAAAGAATGG +
Preference number: 1 (lower is better)
Translates to: LPGREIWPQGNIVPI*ERALRETLWCAKEW
Trigger: CCATTCTTTTGCACACCACAATGTTTCCCTCAGTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR TCA 90 bp GTTCTCTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTaGAACATTCTATTTTGGGAACTGAATCCAATGATCCTAGCACTG +
Preference number: 1 (lower is better)
Translates to: VLSSPFVSLEFSWSH*NILFWELNPMILAL
Trigger: CAGTGCTAGGATCATTGGATTCAGTTCCCAAAATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR CCA 90 bp ATTTTGGGAACTGAATCCAATGATCCTAGCACTGAAATTGCTCCCTaGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGA +
Preference number: 1 (lower is better)
Translates to: ILGTESNDPSTEIAP*EGNLATREHCTHLR
Trigger: TCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGAGCAATTTCAGTGCTAGGATCATTGGATTCAGTTCCCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR TCA 90 bp AGGGCTGAAAAATATAATAATGACTTATTAAAGCCGTGCTCCAAGTaGCCACACCGGCTGTCAGTGGAGAGATGCCTGTTTAAGACACAA +
Preference number: 1 (lower is better)
Translates to: RAEKYNNDLLKPCSK*PHRLSVERCLFKTQ
Trigger: TTGTGTCTTAAACAGGCATCTCTCCACTGACAGCCGGTGTGGTCACTTGGAGCACGGCTTTAATAAGTCATTATTATATTTTTCAGCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR TCA 90 bp AAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACTaGGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAG +
Preference number: 1 (lower is better)
Translates to: KFGHKGTLYPFEKGH*GKHCGVQKNGLLLE
Trigger: CTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCTCAGTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR TCA 90 bp AGAGTTTGGTGTGCTAGCATACAGAGTTTTAAAAATGGTGACAAATaGAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGTGAGC +
Preference number: 1 (lower is better)
Translates to: RVWCASIQSFKNGDK*NQTSCPVLSSPFVS
Trigger: GCTCACAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTTTAAAACTCTGTATGCTAGCACACCAAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR CCA 90 bp AAAGTATTCTTTCAATATAGAAAATCCTACATGTTACCCTGCATGTaGCTAGGATATATCATAACGGAGTTTGTACTGAGTCCTTCTGAT +
Preference number: 1 (lower is better)
Translates to: KVFFQYRKSYMLPCM*LGYIITEFVLSPSD
Trigger: ATCAGAAGGACTCAGTACAAACTCCGTTATGATATATCCTAGCCACATGCAGGGTAACATGTAGGATTTTCTATATTGAAAGAATACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR GCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGTGGTCTGTTGAACCCTaGCGGTCATCACGCTGTCCC +
Preference number: 2 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGWSVEP*RSSRCP
Trigger: GGGACAGCGTGATGACCGGCAGGGTTCAACAGACCA...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGGTCCCACCAATTGGCTaGTCTAGAATGCACAGGCCT +
Preference number: 2 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGVPPIG*SRMHRP
Trigger: AGGCCTGTGCATTCTAGACCAGCCAATTGGTGGGAC...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR TCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACGATGCCCTGGTCTGTTaGACCCTGCCGGTCATCACG +
Preference number: 2 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNDALVC*TLPVIT
Trigger: CGTGATGACCGGCAGGGTTCAACAGACCAGGGCATC...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR TCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGAAGCCGTGCTCCAAGTaGCCACACCGGCTGTCAGTG +
Preference number: 2 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWKPCSK*PHRLSV
Trigger: CACTGACAGCCGGTGTGGTCACTTGGAGCACGGCTT...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR GCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGATGGTCTGTTGAACCCTaGCGGTCATCACGCTGTCCC +
Preference number: 2 (lower is better)
Translates to: RETLWCAKEWFATRGVHGWSVEP*RSSRCP
Trigger: GGGACAGCGTGATGACCGGCAGGGTTCAACAGACCA...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR CAA 90 bp GCTCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTaGAGAAAGGGCACTGAGGGAAACATTGTGGTGTGCAAAAGAATG +
Preference number: 2 (lower is better)
Translates to: APWEGNLATREHCTH*RKGTEGNIVVCKRM
Trigger: CATTCTTTTGCACACCACAATGTTTCCCTCAGTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR TCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTGATGCCCTGGTCTGTTaGACCCTGCCGGTCATCACG +
Preference number: 2 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFDALVC*TLPVIT
Trigger: CGTGATGACCGGCAGGGTTCAACAGACCAGGGCATC...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR TCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTAAGCCGTGCTCCAAGTaGCCACACCGGCTGTCAGTG +
Preference number: 2 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFKPCSK*PHRLSV
Trigger: CACTGACAGCCGGTGTGGTCACTTGGAGCACGGCTT...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR GCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACTGGTCTGTTGAACCCTaGCGGTCATCACGCTGTCCC +
Preference number: 2 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNWSVEP*RSSRCP
Trigger: GGGACAGCGTGATGACCGGCAGGGTTCAACAGACCA...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR CAA 90 bp GAATCCAATGATCCTAGCACTGAAATTGCTCCCTGGGAGGGAAATTaGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACTGAG +
Preference number: 2 (lower is better)
Translates to: ESNDPSTEIAPWEGN*ATREHCTHLRKGTE
Trigger: CTCAGTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGAGCAATTTCAGTGCTAGGATCATTGGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTGTCCCACCAATTGGCTaGTCTAGAATGCACAGGCCT +
Preference number: 2 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIVPPIG*SRMHRP
Trigger: AGGCCTGTGCATTCTAGACCAGCCAATTGGTGGGAC...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGGTCCCACCAATTGGCTaGTCTAGAATGCACAGGCCT +
Preference number: 2 (lower is better)
Translates to: KMVTNETKRLALFSPLPLVPPIG*SRMHRP
Trigger: AGGCCTGTGCATTCTAGACCAGCCAATTGGTGGGAC...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGCACAAGAAGATGCCCTaGTCTGTTGAACCCTGCCGG +
Preference number: 2 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWHKKMP*SVEPCR
Trigger: CCGGCAGGGTTCAACAGACCAGGGCATCTTCTTGTG...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR GCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGTCCTACATGTTACCCTaGATGTGGCTAGGATATATC +
Preference number: 2 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGSYMLP*MWLGYI
Trigger: GATATATCCTAGCCACATGCAGGGTAACATGTAGGA...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR GCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACTGGATTAATGAAACGTaGACACCATCACCATCACTC +
Preference number: 2 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHWINET*TPSPSL
Trigger: GAGTGATGGTGATGGTGTGCACGTTTCATTAATCCA...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR GCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGTGGATTAATGAAACGTaGACACCATCACCATCACTC +
Preference number: 2 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGWINET*TPSPSL
Trigger: GAGTGATGGTGATGGTGTGCACGTTTCATTAATCCA...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTCACAAGAAGATGCCCTaGTCTGTTGAACCCTGCCGG +
Preference number: 2 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFHKKMP*SVEPCR
Trigger: CCGGCAGGGTTCAACAGACCAGGGCATCTTCTTGTG...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTCACACCGGCTGTCAGTaGAGAGATGCCTGTTTAAGA +
Preference number: 2 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIHTGCQ*RDACLR
Trigger: TCTTAAACAGGCATCTCTCCACTGACAGCCGGTGTG...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGACACACCGGCTGTCAGTaGAGAGATGCCTGTTTAAGA +
Preference number: 2 (lower is better)
Translates to: RETLWCAKEWFATRGVHGHTGCQ*RDACLR
Trigger: TCTTAAACAGGCATCTCTCCACTGACAGCCGGTGTG...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGTGGTGTGCAAAAGAATaGTTTGCTACTAGAGGCGTT +
Preference number: 2 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGWCAKE*FATRGV
Trigger: AACGCCTCTAGTAGCAAACCATTCTTTTGCACACCA...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR TCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGAAAGCTGACGGTGATTaGGAGTCATTCAGTATTCAA +
Preference number: 2 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGKADGD*ESFSIQ
Trigger: TTGAATACTGAATGACTCTCAATCACCGTCAGCTTT...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR TCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGTTTGAGAAAGGGCACTaGGGGAAACATTGTGGTGTG +
Preference number: 2 (lower is better)
Translates to: KMVTNETKRLALFSPLPLFEKGH*GKHCGV
Trigger: CACACCACAATGTTTCCCTCAGTGCCCTTTCTCAAA...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCTTTATCCCAAGGAGTaGTATACTGTGGCTCAAATT +
Preference number: 2 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGLYPKE*YTVAQI
Trigger: AATTTGAGCCACAGTATACCACTCCTTGGGATAAAG...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGCCTGGGAGGGAAATTTaGCCACAAGGGAACATTGTA +
Preference number: 2 (lower is better)
Translates to: KMVTNETKRLALFSPLPLPGREI*PQGNIV
Trigger: TACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGG...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR CAA 90 bp AACATTCTATTTTGGGAACTGAATCCAATGATCCTAGCACTGAAATaGCTCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCC +
Preference number: 2 (lower is better)
Translates to: NILFWELNPMILALK*LPGREIWPQGNIVP
Trigger: GGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGAGCAATTTCAGTGCTAGGATCATTGGATTCAGTTCCCAAAATAGAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR TCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGAACATTGTACCCATTTaGGAAAGGGCACTGAGGGAA +
Preference number: 2 (lower is better)
Translates to: KMVTNETKRLALFSPLPLNIVPI*ERALRE
Trigger: TTCCCTCAGTGCCCTTTCTCAAATGGGTACAATGTT...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACACTGAAATTGCTCCCTaGGAGGGAAATTTGGCCACA +
Preference number: 2 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNTEIAP*EGNLAT
Trigger: TGTGGCCAAATTTCCCTCCCAGGGAGCAATTTCAGT...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR CAA 90 bp CTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTTaGGGAACTGAATCCAATGATCCTAGCACTGAAATTGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: LCEPGILMVSLKHSI*GTESNDPSTEIAPW
Trigger: CCAGGGAGCAATTTCAGTGCTAGGATCATTGGATTCAGTTCCCAAAATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR TCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGAACATTGTACCCATTTaGGAAAGGGCACTGAGGGAA +
Preference number: 2 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWNIVPI*ERALRE
Trigger: TTCCCTCAGTGCCCTTTCTCAAATGGGTACAATGTT...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR GCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGACTGTCAGTGGAGAGATaGCTGTTTAAGACACAAGAA +
Preference number: 2 (lower is better)
Translates to: RETLWCAKEWFATRGVHGLSVER*LFKTQE
Trigger: TTCTTGTGTCTTAAACAGGCATCTCTCCACTGACAG...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR GCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGTCCTACATGTTACCCTaGATGTGGCTAGGATATATC +
Preference number: 2 (lower is better)
Translates to: KMVTNETKRLALFSPLPLSYMLP*MWLGYI
Trigger: GATATATCCTAGCCACATGCAGGGTAACATGTAGGA...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR GCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGTGGATTAATGAAACGTaGACACCATCACCATCACTC +
Preference number: 2 (lower is better)
Translates to: KMVTNETKRLALFSPLPLWINET*TPSPSL
Trigger: GAGTGATGGTGATGGTGTGCACGTTTCATTAATCCA...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGACACACCGGCTGTCAGTaGAGAGATGCCTGTTTAAGA +
Preference number: 2 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRHTGCQ*RDACLR
Trigger: TCTTAAACAGGCATCTCTCCACTGACAGCCGGTGTG...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACCTTCAACTGATACAATaGCTACATGACATCAAAGTA +
Preference number: 2 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHLQLIQ*LHDIKV
Trigger: TACTTTGATGTCATGTAGCCATTGTATCAGTTGAAG...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGATGTTACCCTGCATGTaGCTAGGATATATCATAACG +
Preference number: 2 (lower is better)
Translates to: KMVTNETKRLALFSPLPLMLPCM*LGYIIT
Trigger: CGTTATGATATATCCTAGCCACATGCAGGGTAACAT...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAATGTTACCCTGCATGTaGCTAGGATATATCATAACG +
Preference number: 2 (lower is better)
Translates to: RETLWCAKEWFATRGVHGMLPCM*LGYIIT
Trigger: CGTTATGATATATCCTAGCCACATGCAGGGTAACAT...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR TCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGAAAAATGGTGACAAATaGAACCAAACGTCTTGCCCT +
Preference number: 2 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWKNGDK*NQTSCP
Trigger: AGGGCAAGACGTTTGGTTTCATTTGTCACCATTTTT...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR GCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTTCCTACATGTTACCCTaGATGTGGCTAGGATATATC +
Preference number: 2 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFSYMLP*MWLGYI
Trigger: GATATATCCTAGCCACATGCAGGGTAACATGTAGGA...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR GCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGGGAAACATTGTGGTGTaGAAAAGAATGGTTTGCTAC +
Preference number: 2 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWGNIVV*KRMVCY
Trigger: GTAGCAAACCATTCTTTTGCACACCACAATGTTTCC...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR GCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACGGAAACATTGTGGTGTaGAAAAGAATGGTTTGCTAC +
Preference number: 2 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNGNIVV*KRMVCY
Trigger: GTAGCAAACCATTCTTTTGCACACCACAATGTTTCC...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGATGTTACCCTGCATGTaGCTAGGATATATCATAACG +
Preference number: 2 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWMLPCM*LGYIIT
Trigger: CGTTATGATATATCCTAGCCACATGCAGGGTAACAT...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR TCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACTTCCAGCACGATACATaGACAATAGCGATTAATACT +
Preference number: 2 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNFQHDT*TIAINT
Trigger: AGTATTAATCGCTATTGTTCATGTATCGTGCTGGAA...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR TCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGTTCCAGCACGATACATaGACAATAGCGATTAATACT +
Preference number: 2 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWFQHDT*TIAINT
Trigger: AGTATTAATCGCTATTGTTCATGTATCGTGCTGGAA...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR GCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGACTGTCAGTGGAGAGATaGCTGTTTAAGACACAAGAA +
Preference number: 2 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRLSVER*LFKTQE
Trigger: TTCTTGTGTCTTAAACAGGCATCTCTCCACTGACAG...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTCTTCAACTGATACAATaGCTACATGACATCAAAGTA +
Preference number: 2 (lower is better)
Translates to: LLSLCEPGILMVSLKHSILQLIQ*LHDIKV
Trigger: TACTTTGATGTCATGTAGCCATTGTATCAGTTGAAG...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGCTTCAACTGATACAATaGCTACATGACATCAAAGTA +
Preference number: 2 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWLQLIQ*LHDIKV
Trigger: TACTTTGATGTCATGTAGCCATTGTATCAGTTGAAG...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGACTTTATCCCAAGGAGTaGTATACTGTGGCTCAAATT +
Preference number: 2 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRLYPKE*YTVAQI
Trigger: AATTTGAGCCACAGTATACCACTCCTTGGGATAAAG...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR TCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGATTCTCATGGTCTCACTaGAACATTCTATTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRFSWSH*NILFWE
Trigger: TTCCCAAAATAGAATGTTTCAGTGAGACCATGAGAA...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CAA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGATGTCCTCATCTAGCTTaGCCACCTACACGAATCCTC +
Preference number: 3 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRCPHLA*PPTRIL
Trigger: GAGGATTCGTGTAGGTGGCAAAGCTAGATGAGGACA...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR GCA 72 bp TTAAGACACAAGAAGATGCCCTGGTCTGTTGAACCCTaGCGGTCATCACGCTGTCCCACCAATTGGCTGGTC +
Preference number: 3 (lower is better)
Translates to: LRHKKMPWSVEP*RSSRCPTNWLV
Trigger: GACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACCAGGGCATCTTCTTGTGTCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR CCA 72 bp AACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTaGTCTAGAATGCACAGGCCTTTTGCATGTTCTGTG +
Preference number: 3 (lower is better)
Translates to: NPAGHHAVPPIG*SRMHRPFACSV
Trigger: CACAGAACATGCAAAAGGCCTGTGCATTCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CAA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGAGATGCCCTGGTCTGTaGAACCCTGCCGGTCATCAC +
Preference number: 3 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGRCPGL*NPAGHH
Trigger: GTGATGACCGGCAGGGTTCAACAGACCAGGGCATCT...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR TCA 72 bp TGCCTGTTTAAGACACAAGAAGATGCCCTGGTCTGTTaGACCCTGCCGGTCATCACGCTGTCCCACCAATTG +
Preference number: 3 (lower is better)
Translates to: CLFKTQEDALVC*TLPVITLSHQL
Trigger: CAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACCAGGGCATCTTCTTGTGTCTTAAACAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CAA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACTGTCCTCATCTAGCTTaGCCACCTACACGAATCCTC +
Preference number: 3 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHCPHLA*PPTRIL
Trigger: GAGGATTCGTGTAGGTGGCAAAGCTAGATGAGGACA...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CAA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAGATGCCCTGGTCTGTaGAACCCTGCCGGTCATCAC +
Preference number: 3 (lower is better)
Translates to: RETLWCAKEWFATRGVHGRCPGL*NPAGHH
Trigger: GTGATGACCGGCAGGGTTCAACAGACCAGGGCATCT...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CAA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACAGATGCCCTGGTCTGTaGAACCCTGCCGGTCATCAC +
Preference number: 3 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNRCPGL*NPAGHH
Trigger: GTGATGACCGGCAGGGTTCAACAGACCAGGGCATCT...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CAA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACCTGAGTCCTTCTGATTaGCTGGATGAAGGGCTGAAA +
Preference number: 3 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHLSPSD*LDEGLK
Trigger: TTTCAGCCCTTCATCCAGCAAATCAGAAGGACTCAG...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CAA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTACGCTGTCCCACCAATaGGCTGGTCTAGAATGCACA +
Preference number: 3 (lower is better)
Translates to: LLSLCEPGILMVSLKHSITLSHQ*AGLECT
Trigger: TGTGCATTCTAGACCAGCCAATTGGTGGGACAGCGT...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CAA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGACGCTGTCCCACCAATaGGCTGGTCTAGAATGCACA +
Preference number: 3 (lower is better)
Translates to: KMVTNETKRLALFSPLPLTLSHQ*AGLECT
Trigger: TGTGCATTCTAGACCAGCCAATTGGTGGGACAGCGT...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CAA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGGTGCAAAAGAATGGTTaGCTACTAGAGGCGTTCATG +
Preference number: 3 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGVQKNG*LLEAFM
Trigger: CATGAACGCCTCTAGTAGCAAACCATTCTTTTGCAC...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CAA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTCCCTGGGAGGGAAATTaGGCCACAAGGGAACATTGT +
Preference number: 3 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIPWEGN*ATREHC
Trigger: ACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGG...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CAA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGATGTCCTCATCTAGCTTaGCCACCTACACGAATCCTC +
Preference number: 3 (lower is better)
Translates to: RETLWCAKEWFATRGVHGCPHLA*PPTRIL
Trigger: GAGGATTCGTGTAGGTGGCAAAGCTAGATGAGGACA...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CAA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTGGCCACAAGGGAACATaGTACCCATTTGAGAAAGGG +
Preference number: 3 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIGHKGT*YPFEKG
Trigger: CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCC...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CAA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGGGCCACAAGGGAACATaGTACCCATTTGAGAAAGGG +
Preference number: 3 (lower is better)
Translates to: KMVTNETKRLALFSPLPLGHKGT*YPFEKG
Trigger: CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCC...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR TCA 72 bp AGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTaGGAAAGGGCACTGAGGGAAACATTGTGGTGTGCA +
Preference number: 3 (lower is better)
Translates to: REIWPQGNIVPI*ERALRETLWCA
Trigger: TGCACACCACAATGTTTCCCTCAGTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR CCA 72 bp ACTGAATCCAATGATCCTAGCACTGAAATTGCTCCCTaGGAGGGAAATTTGGCCACAAGGGAACATTGTACC +
Preference number: 3 (lower is better)
Translates to: TESNDPSTEIAP*EGNLATREHCT
Trigger: GGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGAGCAATTTCAGTGCTAGGATCATTGGATTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CAA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTCTGAGTCCTTCTGATTaGCTGGATGAAGGGCTGAAA +
Preference number: 3 (lower is better)
Translates to: LLSLCEPGILMVSLKHSILSPSD*LDEGLK
Trigger: TTTCAGCCCTTCATCCAGCAAATCAGAAGGACTCAG...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CAA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGGCACTGAGGGAAACATaGTGGTGTGCAAAAGAATGG +
Preference number: 3 (lower is better)
Translates to: KMVTNETKRLALFSPLPLALRET*WCAKEW
Trigger: CCATTCTTTTGCACACCACAATGTTTCCCTCAGTGC...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CAA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTGCACTGAGGGAAACATaGTGGTGTGCAAAAGAATGG +
Preference number: 3 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIALRET*WCAKEW
Trigger: CCATTCTTTTGCACACCACAATGTTTCCCTCAGTGC...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CAA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGGCACTGAGGGAAACATaGTGGTGTGCAAAAGAATGG +
Preference number: 3 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWALRET*WCAKEW
Trigger: CCATTCTTTTGCACACCACAATGTTTCCCTCAGTGC...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR TCA 72 bp CACAAGGGAACATTGTACCCATTTGAGAAAGGGCACTaGGGGAAACATTGTGGTGTGCAAAAGAATGGTTTG +
Preference number: 3 (lower is better)
Translates to: HKGTLYPFEKGH*GKHCGVQKNGL
Trigger: CAAACCATTCTTTTGCACACCACAATGTTTCCCTCAGTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CAA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTCTGAGTCCTTCTGATTaGCTGGATGAAGGGCTGAAA +
Preference number: 3 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFLSPSD*LDEGLK
Trigger: TTTCAGCCCTTCATCCAGCAAATCAGAAGGACTCAG...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR TCA 72 bp AAATATAATAATGACTTATTAAAGCCGTGCTCCAAGTaGCCACACCGGCTGTCAGTGGAGAGATGCCTGTTT +
Preference number: 3 (lower is better)
Translates to: KYNNDLLKPCSK*PHRLSVERCLF
Trigger: AAACAGGCATCTCTCCACTGACAGCCGGTGTGGTCACTTGGAGCACGGCTTTAATAAGTCATTATTATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR-3UTR CAA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAATCCTAGCACTGAAATaGCTCCCTGGGAGGGAAATT +
Preference number: 3 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRILALK*LPGREI
Trigger: AATTTCCCTCCCAGGGAGCAATTTCAGTGCTAGGAT...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR TCA 72 bp TCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTaGAACATTCTATTTTGGGAACTGAATCCAATGATC +
Preference number: 3 (lower is better)
Translates to: SPFVSLEFSWSH*NILFWELNPMI
Trigger: GATCATTGGATTCAGTTCCCAAAATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR CCA 72 bp TGTAGCTCTTCCAGAGTTTTAAAGGCAAATCTATATTaGCCTACAGTTAACATGCAAATTCATCCAACAAGC +
Preference number: 3 (lower is better)
Translates to: CSSSRVLKANLY*PTVNMQIHPTS
Trigger: GCTTGTTGGATGAATTTGCATGTTAACTGTAGGCCAATATAGATTTGCCTTTAAAACTCTGGAAGAGCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR GCA 72 bp GTATTCTTTCAATATAGAAAATCCTACATGTTACCCTaGATGTGGCTAGGATATATCATAACGGAGTTTGTA +
Preference number: 3 (lower is better)
Translates to: VFFQYRKSYMLP*MWLGYIITEFV
Trigger: TACAAACTCCGTTATGATATATCCTAGCCACATGCAGGGTAACATGTAGGATTTTCTATATTGAAAGAATAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAACCTCCCCCAGCTACTaGGCATGCCCAGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRTSPSY*ACPAAR
Trigger: CCGGGCAGCTGGGCATGCTCAGTAGCTGGGGGAGGT...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353224.10
ENST00000378429.3
CDS-3UTR GCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAGGGCTGACCACCAGCTaGAGGGCCGCCCGAAACTGT +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRGLTTS*RAARNC
Trigger: ACAGTTTCGGGCGGCCCTGCAGCTGGTGGTCAGCCC...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAGTCCCGAGCCTGACCTaGACCTCTGCCGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRVPSLT*TSAAWW
Trigger: CCACCATGCGGCAGAGGTCCAGGTCAGGCTCGGGAC...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAGTAGGTGTCAGACCCTaGCAGTGGAGGGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRVGVRP*QWRAED
Trigger: GTCCTCAGCCCTCCACTGTCAGGGTCTGACACCTAC...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGACTGGGGAACTACTACTaGCTGGGTAGGGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRLGNYY*LGRGKG
Trigger: CCCCTTGCCCCTACCCAGCCAGTAGTAGTTCCCCAG...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353224.10
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGATGGACCTCTGCCGCATaGTGGGCTGAGGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRWTSAA*WAEGLS
Trigger: AGACAAGCCCTCAGCCCACCATGCGGCAGAGGTCCA...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGATGGTCTGTTGAACCCTaGCGGTCATCACGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRWSVEP*RSSRCP
Trigger: GGGACAGCGTGATGACCGGCAGGGTTCAACAGACCA...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAAGGCTGTGCCACTGCTaGGGAAGGCCGGTAAACTTC +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRRLCHC*GRPVNF
Trigger: GAAGTTTACCGGCCTTCCCCAGCAGTGGCACAGCCT...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAACCTCTGCCGCATGGTaGGCTGAGGGCTTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRTSAAW*AEGLSD
Trigger: ATCAGACAAGCCCTCAGCCCACCATGCGGCAGAGGT...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAGACTTTGAGGTAGTTTaGCAGGGCCCCTGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRDFEVV*QGPWGR
Trigger: CCTACCCCAGGGGCCCTGCCAAACTACCTCAAAGTC...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACCTGGAGTCCCGAGCCTaGCCTGGACCTCTGCCGCAT +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHLESRA*PGPLPH
Trigger: ATGCGGCAGAGGTCCAGGTCAGGCTCGGGACTCCAG...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAGGGAGTGCCAACCAATaGTTTCCTCTTCGGCACCTC +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRGSANQ*FPLRHL
Trigger: GAGGTGCCGAAGAGGAAATCATTGGTTGGCACTCCC...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACCAGCCCCTTCTCAGCTaGTACAGCGCTCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHQPLLS*YSAPSA
Trigger: GGCGCTGGGAGCGCTGTAGCAGCTGAGAAGGGGCTG...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACGGGCTGACCACCAGCTaGAGGGCCGCCCGAAACTGT +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHGLTTS*RAARNC
Trigger: ACAGTTTCGGGCGGCCCTGCAGCTGGTGGTCAGCCC...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAGTTTCTCGGTGGCGATaGATACGATGCCGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRVSRWR*IRCRLS
Trigger: GCTCAACCGGCATCGTATGCATCGCCACCGAGAAAC...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAGTCCACCATAGGCTTTaGCCTGTTGGCCGTATCTGC +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRVHHRL*PVGRIC
Trigger: GCAGATACGGCCAACAGGCCAAAGCCTATGGTGGAC...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGTTCTTCCGCGTGGCCTaGACCGTGGCTGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGFFRVA*TVAGGS
Trigger: GGAGCCTCCAGCCACGGTCCAGGCCACGCGGAAGAA...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGACGTGCCCATTTTGCTTaGCTGCGTGGCTGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRRAHFA*LRGCLY
Trigger: ATAGAGGCAGCCACGCAGCCAAGCAAAATGGGCACG...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGACTACTCGAGGCTCTCTaGTACTCCCACTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRLLEAL*YSHLRS
Trigger: TGACCTCAAGTGGGAGTATCAGAGAGCCTCGAGTAG...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGTCAGCGAAGCGGCGGTaGCTCAGCCCCTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGSAKRR*LSPFSA
Trigger: AGCTGAGAAGGGGCTGAGGCACCGCCGCTTCGCTGA...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACTCAGCGAAGCGGCGGTaGCTCAGCCCCTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHSAKRR*LSPFSA
Trigger: AGCTGAGAAGGGGCTGAGGCACCGCCGCTTCGCTGA...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAAGATGTACTGCGAACTaGTCTGCAGGGAGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRRCTAN*SAGRGD
Trigger: ATCACCCCTCCCTGCAGAGCAGTTCGCAGTACATCT...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGACTCCCTGATCTGGGGTaGGTGGGCTTTCTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRLPDLG*VGFLSL
Trigger: TAAGGAAAGAAAGCCCACCCACCCCAGATCAGGGAG...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGATTGGAATGCACATTGTaGGCTCGGACAAGCGAGGGT +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRLECTL*ARTSEG
Trigger: ACCCTCGCTTGTCCGAGCCCACAATGTGCATTCCAA...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACGTTTGGCAGGGCCCCTaGGGTAGGTGTCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHVWQGP*GRCQTL
Trigger: CAGGGTCTGACACCTACCCCAGGGGCCCTGCCAAAC...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGGTTTGGCAGGGCCCCTaGGGTAGGTGTCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGVWQGP*GRCQTL
Trigger: CAGGGTCTGACACCTACCCCAGGGGCCCTGCCAAAC...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACTTCCCTGGGGTCTCCTaGGCTGACCACCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHFPGVS*ADHQLQ
Trigger: CTGCAGCTGGTGGTCAGCCCAGGAGACCCCAGGGAA...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTACCTCCCCCAGCTACTaGGCATGCCCAGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSITSPSY*ACPAAR
Trigger: CCGGGCAGCTGGGCATGCTCAGTAGCTGGGGGAGGT...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353224.10
ENST00000378429.3
CDS-3UTR TCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGTGGGCTGTTGCTCTCTaGGAGGGCTCCCTCACCAAC +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGWAVAL*EGSLTN
Trigger: GTTGGTGAGGGAGCCCTCTCAGAGAGCAACAGCCCA...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACTGGGCTGTTGCTCTCTaGGAGGGCTCCCTCACCAAC +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHWAVAL*EGSLTN
Trigger: GTTGGTGAGGGAGCCCTCTCAGAGAGCAACAGCCCA...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGAAGCCGTGCTCCAAGTaGCCACACCGGCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGKPCSK*PHRLSV
Trigger: CACTGACAGCCGGTGTGGTCACTTGGAGCACGGCTT...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGACTGAGCATGCCCAGCTaGCCGGCTTCGCCCCTCGGA +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGLSMPS*PASPLG
Trigger: TCCGAGGGGCGAAGCCGGGCAGCTGGGCATGCTCAG...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353224.10
ENST00000378429.3
CDS-3UTR GCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGTCTGCTAACAGGCTGTaGCACTGCTGGGGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGSANRL*HCWGRP
Trigger: CGGCCTTCCCCAGCAGTGGCACAGCCTGTTAGCAGA...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGACTTTCCTTAGGGAGTTaGAGCGAGTCACCGAGATGT +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRLSLGS*SESPRC
Trigger: ACATCTCGGTGACTCGCTCCAACTCCCTAAGGAAAG...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTGGCCTGGACCGTGGCTaGAGGCTCCCTGATCTGGGG +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIGLDRG*RLPDLG
Trigger: CCCCAGATCAGGGAGCCTCCAGCCACGGTCCAGGCC...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGACATAGTCATCCAGGCTaGGTCCCCATTCACTTTCAC +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRHSHPG*VPIHFH
Trigger: GTGAAAGTGAATGGGGACCCAGCCTGGATGACTATG...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACGCCCGAAACTGTTCATaGGACACCCTGGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHARNCS*DTLEGC
Trigger: GCAGCCCTCCAGGGTGTCCCATGAACAGTTTCGGGC...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGACTGGAGTCCCGAGCCTaGCCTGGACCTCTGCCGCAT +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGLESRA*PGPLPH
Trigger: ATGCGGCAGAGGTCCAGGTCAGGCTCGGGACTCCAG...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACCTGAGCATGCCCAGCTaGCCGGCTTCGCCCCTCGGA +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNLSMPS*PASPLG
Trigger: TCCGAGGGGCGAAGCCGGGCAGCTGGGCATGCTCAG...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353224.10
ENST00000378429.3
CDS-3UTR GCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACGCCGTGGAGATGTACTaGGAACTGCTCTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHAVEMY*ELLCRE
Trigger: CTCCCTGCAGAGCAGTTCGCAGTACATCTCCACGGC...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGGCCGTGGAGATGTACTaGGAACTGCTCTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGAVEMY*ELLCRE
Trigger: CTCCCTGCAGAGCAGTTCGCAGTACATCTCCACGGC...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGTGGCGATGCATACGATaGCGGTTGAGCCTTCCCCGA +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGWRCIR*RLSLPR
Trigger: TCGGGGAAGGCTCAACCGGCATCGTATGCATCGCCA...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGACCATCCAGTAGGGAGTaGCAACCAATGATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRPSSRE*QPMISS
Trigger: AGAGGAAATCATTGGTTGGCACTCCCTACTGGATGG...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGTGCTCCGGGTTTTCGTaGCAGCCGGCGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWCSGFS*QPAGGR
Trigger: CCTGCCTCCCGCCGGCTGCCACGAAAACCCGGAGCA...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353224.10
CDS-3UTR CCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGATCCCCGGGCGCACGCTaGGGAACTACTACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGSPGAR*GTTTGW
Trigger: CCAGCCAGTAGTAGTTCCCCAGCGTGCGCCCGGGGA...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353224.10
ENST00000378429.3
CDS-3UTR CCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACGGAGGCTCCCTGATCTaGGGTGGGTGGGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHGGSLI*GGWAFF
Trigger: AAAGAAAGCCCACCCACCCCAGATCAGGGAGCCTCC...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACGGCCTGGACCGTGGCTaGAGGCTCCCTGATCTGGGG +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNGLDRG*RLPDLG
Trigger: CCCCAGATCAGGGAGCCTCCAGCCACGGTCCAGGCC...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGATTCTTCCGCGTGGCCTaGACCGTGGCTGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGFFRVA*TVAGGS
Trigger: GGAGCCTCCAGCCACGGTCCAGGCCACGCGGAAGAA...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAGATTCGCTGGAATACTaGGAGAAGGTGATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRDSLEY*EKVMKP
Trigger: TGGCTTCATCACCTTCTCCCAGTATTCCAGCGAATC...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTACGCCAGGCTCTCCTTaGAGCACCCGCTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSITPGSP*STRWSL
Trigger: CAGGGACCAGCGGGTGCTCCAAGGAGAGCCTGGCGT...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGACGCCAGGCTCTCCTTaGAGCACCCGCTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLTPGSP*STRWSL
Trigger: CAGGGACCAGCGGGTGCTCCAAGGAGAGCCTGGCGT...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGGTCCCGAGCCTGACCTaGACCTCTGCCGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLVPSLT*TSAAWW
Trigger: CCACCATGCGGCAGAGGTCCAGGTCAGGCTCGGGAC...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGATCCTCCGCATCGCCTaGAGGGGAGGCTCATTGAAG +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGILRIA*RGGSLK
Trigger: CTTCAATGAGCCTCCCCTCCAGGCGATGCGGAGGAT...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAACTGAAATTGCTCCCTaGGAGGGAAATTTGGCCACA +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRTEIAP*EGNLAT
Trigger: TGTGGCCAAATTTCCCTCCCAGGGAGCAATTTCAGT...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTTCGGAGGACTGTCCATaGGCGTACGCAGCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSISEDCP*AYAAAP
Trigger: CGGAGCAGCTGCGTACGCTCATGGACAGTCCTCCGA...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353224.10
ENST00000378429.3
CDS-3UTR TCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTCGGGTAGGTGCTGGATaGGAGGCTGAGGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIRVGAG*EAEGAQ
Trigger: CTGAGCTCCCTCAGCCTCTCATCCAGCACCTACCCG...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACGGGAGTGCCAACCAATaGTTTCCTCTTCGGCACCTC +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHGSANQ*FPLRHL
Trigger: GAGGTGCCGAAGAGGAAATCATTGGTTGGCACTCCC...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAAACATTGTACCCATTTaGGAAAGGGCACTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRNIVPI*ERALRE
Trigger: TTCCCTCAGTGCCCTTTCTCAAATGGGTACAATGTT...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAGACTCCAGAGGAGTGTaGCTATTTCTATTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRDSRGV*LFLFCN
Trigger: GTTGCAGAATAGAAATAGCCACACTCCTCTGGAGTC...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACCGTGCCCATTTTGCTTaGCTGCGTGGCTGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHRAHFA*LRGCLY
Trigger: ATAGAGGCAGCCACGCAGCCAAGCAAAATGGGCACG...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGTTCCCTGGGGTCTCCTaGGCTGACCACCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLFPGVS*ADHQLQ
Trigger: CTGCAGCTGGTGGTCAGCCCAGGAGACCCCAGGGAA...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGATCTTCGGCACCTCTTTaGAAACTTGAGCACAGAAAC +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRSSAPL*KLEHRN
Trigger: GTTTCTGTGCTCAAGTTTCCAAAGAGGTGCCGAAGA...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACAAGAAGATGCCCTaGTCTGTTGAACCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGHKKMP*SVEPCR
Trigger: CCGGCAGGGTTCAACAGACCAGGGCATCTTCTTGTG...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACTCGGAGGACTGTCCATaGGCGTACGCAGCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNSEDCP*AYAAAP
Trigger: CGGAGCAGCTGCGTACGCTCATGGACAGTCCTCCGA...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353224.10
ENST00000378429.3
CDS-3UTR TCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAGCCAGCGGGAGGGGGTaGGAGGCAGAGCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRASGRG*EAEPQL
Trigger: AAGCTGTGGCTCTGCCTCTCACCCCCTCCCGCTGGC...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353224.10
ENST00000378429.3
CDS-3UTR TCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTCTGGAGTCCCGAGCCTaGCCTGGACCTCTGCCGCAT +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFLESRA*PGPLPH
Trigger: ATGCGGCAGAGGTCCAGGTCAGGCTCGGGACTCCAG...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAGTAGGTGTCAGACCCTaGCAGTGGAGGGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGVGVRP*QWRAED
Trigger: GTCCTCAGCCCTCCACTGTCAGGGTCTGACACCTAC...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGGTAGGTGTCAGACCCTaGCAGTGGAGGGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLVGVRP*QWRAED
Trigger: GTCCTCAGCCCTCCACTGTCAGGGTCTGACACCTAC...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGCGGGTAGGTGCTGGATaGGAGGCTGAGGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWRVGAG*EAEGAQ
Trigger: CTGAGCTCCCTCAGCCTCTCATCCAGCACCTACCCG...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTTGGGCTGTTGCTCTCTaGGAGGGCTCCCTCACCAAC +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIWAVAL*EGSLTN
Trigger: GTTGGTGAGGGAGCCCTCTCAGAGAGCAACAGCCCA...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGGATGCCCTGGTCTGTTaGACCCTGCCGGTCATCACG +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLDALVC*TLPVIT
Trigger: CGTGATGACCGGCAGGGTTCAACAGACCAGGGCATC...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAGCCGTGCTCCAAGTaGCCACACCGGCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGKPCSK*PHRLSV
Trigger: CACTGACAGCCGGTGTGGTCACTTGGAGCACGGCTT...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTCAGCCCCTTCTCAGCTaGTACAGCGCTCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFQPLLS*YSAPSA
Trigger: GGCGCTGGGAGCGCTGTAGCAGCTGAGAAGGGGCTG...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAGCAACTTTTCGCTGGTaGTTGTCAGTCTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRATFRW*LSVFFI
Trigger: AATGAAGAAGACTGACAAGCACCAGCGAAAAGTTGC...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGTCTGCTAACAGGCTGTaGCACTGCTGGGGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLSANRL*HCWGRP
Trigger: CGGCCTTCCCCAGCAGTGGCACAGCCTGTTAGCAGA...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACGCTTGGCTGCGTGGCTaGCTCTATAATACGGATCCA +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHAWLRG*LYNTDP
Trigger: TGGATCCGTATTATAGAGGCAGCCACGCAGCCAAGC...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAGGGATGGGTTTTAAATaGACTTGCTCCAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRGMGFK*TCSKWH
Trigger: ATGCCATTTGGAGCAAGTGCATTTAAAACCCATCCC...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGAGATGTACTGCGAACTaGTCTGCAGGGAGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGRCTAN*SAGRGD
Trigger: ATCACCCCTCCCTGCAGAGCAGTTCGCAGTACATCT...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAGGCCTGGACCGTGGCTaGAGGCTCCCTGATCTGGGG +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRGLDRG*RLPDLG
Trigger: CCCCAGATCAGGGAGCCTCCAGCCACGGTCCAGGCC...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTTTCTTCCGCGTGGCCTaGACCGTGGCTGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFFFRVA*TVAGGS
Trigger: GGAGCCTCCAGCCACGGTCCAGGCCACGCGGAAGAA...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTCCATTTTCTTCCGCGTaGCCTGGACCGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIPFSSA*PGPWLE
Trigger: CTCCAGCCACGGTCCAGGCCACGCGGAAGAAAATGG...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGTGGACCTCTGCCGCATaGTGGGCTGAGGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLWTSAA*WAEGLS
Trigger: AGACAAGCCCTCAGCCCACCATGCGGCAGAGGTCCA...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACTTGGAATGCACATTGTaGGCTCGGACAAGCGAGGGT +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHLECTL*ARTSEG
Trigger: ACCCTCGCTTGTCCGAGCCCACAATGTGCATTCCAA...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGTCAGGTAGGAAGCCGTaGAGATGTACTGCGAACTGC +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGSGRKP*RCTANC
Trigger: GCAGTTCGCAGTACATCTCCACGGCTTCCTACCTGA...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAGCCCGAAACTGTTCATaGGACACCCTGGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGARNCS*DTLEGC
Trigger: GCAGCCCTCCAGGGTGTCCCATGAACAGTTTCGGGC...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACTTCCCTGGGGTCTCCTaGGCTGACCACCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNFPGVS*ADHQLQ
Trigger: CTGCAGCTGGTGGTCAGCCCAGGAGACCCCAGGGAA...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTCTGACAGTGGAGGGCTaGGGACCATCTGTGCTCGAT +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSILTVEG*GPSVLD
Trigger: ATCGAGCACAGATGGTCCTCAGCCCTCCACTGTCAG...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGCTGACAGTGGAGGGCTaGGGACCATCTGTGCTCGAT +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLLTVEG*GPSVLD
Trigger: ATCGAGCACAGATGGTCCTCAGCCCTCCACTGTCAG...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGGAGAGCTCTCAGAACTaGCAGGCAGACAGTAGCTAT +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGESSQN*QADSSY
Trigger: ATAGCTACTGTCTGCCTGTCAGTTCTGAGAGCTCTC...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAAAAGCTGACGGTGATTaGGAGTCATTCAGTATTCAA +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRKADGD*ESFSIQ
Trigger: TTGAATACTGAATGACTCTCAATCACCGTCAGCTTT...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACGCTGAGGACCATCTGTaGTCGATCGTAATCCACCTT +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHAEDHL*SIVIHL
Trigger: AAGGTGGATTACGATCGAGCACAGATGGTCCTCAGC...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAAGGAATAGCCCGATTTaGTTTGACTTTGAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRRNSPI*FDFEVV
Trigger: AACTACCTCAAAGTCAAAGCAAATCGGGCTATTCCT...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGGCCGTGGAGATGTACTaGGAACTGCTCTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLAVEMY*ELLCRE
Trigger: CTCCCTGCAGAGCAGTTCGCAGTACATCTCCACGGC...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGGAGTTCCTGGGCTGTTaGTCTCTGAGAGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLEFLGC*SLRGLP
Trigger: AGGGAGCCCTCTCAGAGAGCAACAGCCCAGGAACTC...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGTGGTCTGTTGAACCCTaGCGGTCATCACGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLWSVEP*RSSRCP
Trigger: GGGACAGCGTGATGACCGGCAGGGTTCAACAGACCA...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGCTGGGGAACTACTACTaGCTGGGTAGGGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWLGNYY*LGRGKG
Trigger: CCCCTTGCCCCTACCCAGCCAGTAGTAGTTCCCCAG...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353224.10
ENST00000378429.3
CDS-3UTR CCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGATCCCCGGGCGCACGCTaGGGAACTACTACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRSPGAR*GTTTGW
Trigger: CCAGCCAGTAGTAGTTCCCCAGCGTGCGCCCGGGGA...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353224.10
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAAAACTTCTGCTCTTGTaGATCAAACCCAGTATGAAC +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRKLLLL*IKPSMN
Trigger: GTTCATACTGGGTTTGATCCACAAGAGCAGAAGTTT...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTAGGCTGTGCCACTGCTaGGGAAGGCCGGTAAACTTC +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIRLCHC*GRPVNF
Trigger: GAAGTTTACCGGCCTTCCCCAGCAGTGGCACAGCCT...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCTTTCCTTAGGGAGTTaGAGCGAGTCACCGAGATGT +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGLSLGS*SESPRC
Trigger: ACATCTCGGTGACTCGCTCCAACTCCCTAAGGAAAG...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGCCATTTTCTTCCGCGTaGCCTGGACCGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWPFSSA*PGPWLE
Trigger: CTCCAGCCACGGTCCAGGCCACGCGGAAGAAAATGG...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACCATAGTCATCCAGGCTaGGTCCCCATTCACTTTCAC +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHHSHPG*VPIHFH
Trigger: GTGAAAGTGAATGGGGACCCAGCCTGGATGACTATG...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGGGCATCATCGGTTCCTaGAGTCCCGAGCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWGIIGS*SPEPDL
Trigger: CAGGTCAGGCTCGGGACTCCAGGAACCGATGATGCC...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACGGCATCATCGGTTCCTaGAGTCCCGAGCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNGIIGS*SPEPDL
Trigger: CAGGTCAGGCTCGGGACTCCAGGAACCGATGATGCC...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACTGCACTTGCTCCAAATaGCATCATCGGTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHCTCSK*HHRFLE
Trigger: CTCCAGGAACCGATGATGCCATTTGGAGCAAGTGCA...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGTGCACTTGCTCCAAATaGCATCATCGGTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGCTCSK*HHRFLE
Trigger: CTCCAGGAACCGATGATGCCATTTGGAGCAAGTGCA...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTGTTTGGCAGGGCCCCTaGGGTAGGTGTCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFVWQGP*GRCQTL
Trigger: CAGGGTCTGACACCTACCCCAGGGGCCCTGCCAAAC...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAGACTTTGAGGTAGTTTaGCAGGGCCCCTGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGDFEVV*QGPWGR
Trigger: CCTACCCCAGGGGCCCTGCCAAACTACCTCAAAGTC...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAGTTCTTCATTCATTCTaGTGTGAGTCACAATGTCTG +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRVLHSF*CESQCL
Trigger: CAGACATTGTGACTCACACCAGAATGAATGAAGAAC...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAATGTTACCCTGCATGTaGCTAGGATATATCATAACG +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRMLPCM*LGYIIT
Trigger: CGTTATGATATATCCTAGCCACATGCAGGGTAACAT...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGACTTTATCCCAAGGAGTaGTATACTGTGGCTCAAATT +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRLYPKE*YTVAQI
Trigger: AATTTGAGCCACAGTATACCACTCCTTGGGATAAAG...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGATGGGAGACAGAAACCTaGTGGCCGGCTGTCAGCGAA +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGWETET*WPAVSE
Trigger: TTCGCTGACAGCCGGCCACCAGGTTTCTGTCTCCCA...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378423.5
CDS-3UTR CCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAAAAACACTAGAAACATaGTCTCAGAGGTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRKTLET*SQRSRR
Trigger: TCTTCTGGACCTCTGAGACCATGTTTCTAGTGTTTT...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378429.3
CDS-3UTR TCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGACGGGTAGGTGCTGGATaGGAGGCTGAGGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRRVGAG*EAEGAQ
Trigger: CTGAGCTCCCTCAGCCTCTCATCCAGCACCTACCCG...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGGAATCCTCTGCTCAGTaGTGCCTGTATTGTCTCATG +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGESSAQ*CLYCLM
Trigger: CATGAGACAATACAGGCATCACTGAGCAGAGGATTC...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACTTTGAGAAAGGGCACTaGGGGAAACATTGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHFEKGH*GKHCGV
Trigger: CACACCACAATGTTTCCCTCAGTGCCCTTTCTCAAA...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGATTCTCATGGTCTCACTaGAACATTCTATTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRFSWSH*NILFWE
Trigger: TTCCCAAAATAGAATGTTTCAGTGAGACCATGAGAA...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGATGAGCGTACGCAGCTaGTCCGGGTTTTCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWMSVRS*SGFSWQ
Trigger: CTGCCACGAAAACCCGGAGCAGCTGCGTACGCTCAT...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353224.10
CDS-3UTR GCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACAACAGGCTGTGCCACTaGTGGGGAAGGCCGGTAAAC +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNNRLCH*WGRPVN
Trigger: GTTTACCGGCCTTCCCCAGCAGTGGCACAGCCTGTT...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGGCACCCGCTGGTCCCTaGAGTTCTAGAAGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLAPAGP*SSRRCE
Trigger: TTCACACCTTCTAGAACTGCAGGGACCAGCGGGTGC...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACAATCCACCTTTGGAATaGACATTGTGGGCTCGGACA +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHNPPLE*TLWART
Trigger: TGTCCGAGCCCACAATGTGCATTCCAAAGGTGGATT...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACTGGCGATGCATACGATaGCGGTTGAGCCTTCCCCGA +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNWRCIR*RLSLPR
Trigger: TCGGGGAAGGCTCAACCGGCATCGTATGCATCGCCA...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCCATCCAGTAGGGAGTaGCAACCAATGATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGPSSRE*QPMISS
Trigger: AGAGGAAATCATTGGTTGGCACTCCCTACTGGATGG...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCCTACACGAATCCTCTaGTCAGTGATGCCTGTATTG +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGPTRIL*SVMPVL
Trigger: CAATACAGGCATCACTGAGCAGAGGATTCGTGTAGG...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGAGGCTGTGCCACTGCTaGGGAAGGCCGGTAAACTTC +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWRLCHC*GRPVNF
Trigger: GAAGTTTACCGGCCTTCCCCAGCAGTGGCACAGCCT...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAGTCCACCATAGGCTTTaGCCTGTTGGCCGTATCTGC +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGVHHRL*PVGRIC
Trigger: GCAGATACGGCCAACAGGCCAAAGCCTATGGTGGAC...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACTTCATAGGAGCCAGCTaGATGGGTGTGATGCATGAA +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHFIGAS*MGVMHE
Trigger: TTCATGCATCACACCCATCCAGCTGGCTCCTATGAA...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACGGAGGCTCCCTGATCTaGGGTGGGTGGGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNGGSLI*GGWAFF
Trigger: AAAGAAAGCCCACCCACCCCAGATCAGGGAGCCTCC...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACGATTCGCTGGAATACTaGGAGAAGGTGATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHDSLEY*EKVMKP
Trigger: TGGCTTCATCACCTTCTCCCAGTATTCCAGCGAATC...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGACCTCTGCCGCATGGTaGGCTGAGGGCTTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWTSAAW*AEGLSD
Trigger: ATCAGACAAGCCCTCAGCCCACCATGCGGCAGAGGT...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACGACTTTGAGGTAGTTTaGCAGGGCCCCTGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNDFEVV*QGPWGR
Trigger: CCTACCCCAGGGGCCCTGCCAAACTACCTCAAAGTC...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTGCCCGAAACTGTTCATaGGACACCCTGGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFARNCS*DTLEGC
Trigger: GCAGCCCTCCAGGGTGTCCCATGAACAGTTTCGGGC...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTCTGTGTGTTTCTCGGTaGCGATGCATACGATGCCGG +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSILCVSR*RCIRCR
Trigger: CCGGCATCGTATGCATCGCCACCGAGAAACACACAG...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACATCCTCCGCATCGCCTaGAGGGGAGGCTCATTGAAG +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNILRIA*RGGSLK
Trigger: CTTCAATGAGCCTCCCCTCCAGGCGATGCGGAGGAT...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTCACAAGAAGATGCCCTaGTCTGTTGAACCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIHKKMP*SVEPCR
Trigger: CCGGCAGGGTTCAACAGACCAGGGCATCTTCTTGTG...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCCTGGGAGGGAAATTTaGCCACAAGGGAACATTGTA +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGPGREI*PQGNIV
Trigger: TACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGG...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGGCTCAGGGAAGAGGTTaGAACTGCAGACACAGATTT +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGAQGRG*NCRHRF
Trigger: AAATCTGTGTCTGCAGTTCCAACCTCTTCCCTGAGC...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378423.5
CDS-3UTR CCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACTGCATGAACATCTGGTaGCCGGCTGTCAGCGAAGCG +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNCMNIW*PAVSEA
Trigger: CGCTTCGCTGACAGCCGGCCACCAGATGTTCATGCA...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378429.3
CDS-3UTR TCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGGGATCAAACCCAGTATaGACCCTGTGTTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGGSNPV*TLCSKL
Trigger: CAACTTTGAACACAGGGTTCATACTGGGTTTGATCC...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTGATGGGTGTGATGCATaGAGGGTCCACCATAGGCTT +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIDGCDA*RVHHRL
Trigger: AAGCCTATGGTGGACCCTTCATGCATCACACCCATC...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGCTACTCGAGGCTCTCTaGTACTCCCACTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLLLEAL*YSHLRS
Trigger: TGACCTCAAGTGGGAGTATCAGAGAGCCTCGAGTAG...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTGCATACGATGCCGGTTaGGCCTTCCCCGATTTTGAT +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIAYDAG*AFPDFD
Trigger: ATCAAAATCGGGGAAGGCTCAACCGGCATCGTATGC...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAGATGCCCTGGTCTGTTaGACCCTGCCGGTCATCACG +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRDALVC*TLPVIT
Trigger: CGTGATGACCGGCAGGGTTCAACAGACCAGGGCATC...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAAAGCCGTGCTCCAAGTaGCCACACCGGCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRKPCSK*PHRLSV
Trigger: CACTGACAGCCGGTGTGGTCACTTGGAGCACGGCTT...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGAACATTGTACCCATTTaGGAAAGGGCACTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGNIVPI*ERALRE
Trigger: TTCCCTCAGTGCCCTTTCTCAAATGGGTACAATGTT...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACTTGGAAATACAGCTTTaGTGCTCAGGGAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHLEIQL*CSGKRL
Trigger: CAACCTCTTCCCTGAGCATCAAAGCTGTATTTCCAA...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378423.5
CDS-3UTR GCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTAACAGGCTGTGCCACTaGTGGGGAAGGCCGGTAAAC +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFNRLCH*WGRPVN
Trigger: GTTTACCGGCCTTCCCCAGCAGTGGCACAGCCTGTT...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGATCTGCTAACAGGCTGTaGCACTGCTGGGGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRSANRL*HCWGRP
Trigger: CGGCCTTCCCCAGCAGTGGCACAGCCTGTTAGCAGA...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGGCTTGGCTGCGTGGCTaGCTCTATAATACGGATCCA +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLAWLRG*LYNTDP
Trigger: TGGATCCGTATTATAGAGGCAGCCACGCAGCCAAGC...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAATTACGTGCCCATTTTaGTTGGCTGCGTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGITCPF*LAAWLP
Trigger: AGGCAGCCACGCAGCCAAGCAAAATGGGCACGTAAT...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGGCACCCGCTGGTCCCTaGAGTTCTAGAAGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWAPAGP*SSRRCE
Trigger: TTCACACCTTCTAGAACTGCAGGGACCAGCGGGTGC...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACGTTTCTCGGTGGCGATaGATACGATGCCGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNVSRWR*IRCRLS
Trigger: GCTCAACCGGCATCGTATGCATCGCCACCGAGAAAC...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTGAGTTCCTGGGCTGTTaGTCTCTGAGAGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFEFLGC*SLRGLP
Trigger: AGGGAGCCCTCTCAGAGAGCAACAGCCCAGGAACTC...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGACAGTGTATTTCTGGTaGCCGGCTGTCAGCGAAGCG +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWTVYFW*PAVSEA
Trigger: CGCTTCGCTGACAGCCGGCCACCAGAAATACACTGT...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353224.10
CDS-3UTR CCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACCCCTGTGTTCAAAGTTaGACGGGCCAGATATTTCAA +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHPCVQS*TGQIFQ
Trigger: TTGAAATATCTGGCCCGTCCAACTTTGAACACAGGG...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGGTCCACCATAGGCTTTaGCCTGTTGGCCGTATCTGC +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWVHHRL*PVGRIC
Trigger: GCAGATACGGCCAACAGGCCAAAGCCTATGGTGGAC...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGACCATTTTCTTCCGCGTaGCCTGGACCGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRPFSSA*PGPWLE
Trigger: CTCCAGCCACGGTCCAGGCCACGCGGAAGAAAATGG...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGCGTGCCCATTTTGCTTaGCTGCGTGGCTGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWRAHFA*LRGCLY
Trigger: ATAGAGGCAGCCACGCAGCCAAGCAAAATGGGCACG...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGATGGACCTCTGCCGCATaGTGGGCTGAGGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRWTSAA*WAEGLS
Trigger: AGACAAGCCCTCAGCCCACCATGCGGCAGAGGTCCA...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTGGTGATGGTACAAGGTaGCTTTGTGGTACCCAGACG +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIGDGTR*LCGTQT
Trigger: CGTCTGGGTACCACAAAGCCACCTTGTACCATCACC...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGGGTGATGGTACAAGGTaGCTTTGTGGTACCCAGACG +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLGDGTR*LCGTQT
Trigger: CGTCTGGGTACCACAAAGCCACCTTGTACCATCACC...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGTCAGGTAGGAAGCCGTaGAGATGTACTGCGAACTGC +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLSGRKP*RCTANC
Trigger: GCAGTTCGCAGTACATCTCCACGGCTTCCTACCTGA...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACCTGTGTGTTTCTCGGTaGCGATGCATACGATGCCGG +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNLCVSR*RCIRCR
Trigger: CCGGCATCGTATGCATCGCCACCGAGAAACACACAG...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGTCTTCGGCACCTCTTTaGAAACTTGAGCACAGAAAC +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGSSAPL*KLEHRN
Trigger: GTTTCTGTGCTCAAGTTTCCAAAGAGGTGCCGAAGA...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGCTACTCGAGGCTCTCTaGTACTCCCACTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWLLEAL*YSHLRS
Trigger: TGACCTCAAGTGGGAGTATCAGAGAGCCTCGAGTAG...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGACTGACAGTGGAGGGCTaGGGACCATCTGTGCTCGAT +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRLTVEG*GPSVLD
Trigger: ATCGAGCACAGATGGTCCTCAGCCCTCCACTGTCAG...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAGTACTGGTGACTGCTTaGGGAATAGCCCGATTTGCT +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGVLVTA*GIARFA
Trigger: AGCAAATCGGGCTATTCCTCAAGCAGTCACCAGTAC...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTGTACTGGTGACTGCTTaGGGAATAGCCCGATTTGCT +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIVLVTA*GIARFA
Trigger: AGCAAATCGGGCTATTCCTCAAGCAGTCACCAGTAC...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACTCATTCATTCTGGTGTaGGTCACAATGTCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHSFILV*VTMSVK
Trigger: CTTGACAGACATTGTGACTCACACCAGAATGAATGA...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGGAGAGCTCTCAGAACTaGCAGGCAGACAGTAGCTAT +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLESSQN*QADSSY
Trigger: ATAGCTACTGTCTGCCTGTCAGTTCTGAGAGCTCTC...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTGGGAGTGCCAACCAATaGTTTCCTCTTCGGCACCTC +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFGSANQ*FPLRHL
Trigger: GAGGTGCCGAAGAGGAAATCATTGGTTGGCACTCCC...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAAACAGGCTGTGCCACTaGTGGGGAAGGCCGGTAAAC +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRNRLCH*WGRPVN
Trigger: GTTTACCGGCCTTCCCCAGCAGTGGCACAGCCTGTT...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACGCTTGGCTGCGTGGCTaGCTCTATAATACGGATCCA +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNAWLRG*LYNTDP
Trigger: TGGATCCGTATTATAGAGGCAGCCACGCAGCCAAGC...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACGGTTTTAAATGCACTTaGTCCAAATGGCATCATCGG +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHGFKCT*SKWHHR
Trigger: CCGATGATGCCATTTGGAGCAAGTGCATTTAAAACC...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGACGGGTACTGGTGACTaGTTGAGGAATAGCCCGATT +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLTGTGD*LRNSPI
Trigger: AATCGGGCTATTCCTCAAGCAGTCACCAGTACCCGT...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTGTTTCTCGGTGGCGATaGATACGATGCCGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFVSRWR*IRCRLS
Trigger: GCTCAACCGGCATCGTATGCATCGCCACCGAGAAAC...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGACCACAGTGTATTTCTaGTGGCCGGCTGTCAGCGAA +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWTTVYF*WPAVSE
Trigger: TTCGCTGACAGCCGGCCACCAGAAATACACTGTGGT...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353224.10
CDS-3UTR CCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAGGAGGCTCCCTGATCTaGGGTGGGTGGGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRGGSLI*GGWAFF
Trigger: AAAGAAAGCCCACCCACCCCAGATCAGGGAGCCTCC...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAACCTCTGCCGCATGGTaGGCTGAGGGCTTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRTSAAW*AEGLSD
Trigger: ATCAGACAAGCCCTCAGCCCACCATGCGGCAGAGGT...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTTGCACTTGCTCCAAATaGCATCATCGGTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSICTCSK*HHRFLE
Trigger: CTCCAGGAACCGATGATGCCATTTGGAGCAAGTGCA...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGTACAAGGTGGCTTTGTaGTACCCAGACGGGTACTGG +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWYKVAL*YPDGYW
Trigger: CCAGTACCCGTCTGGGTACCACAAAGCCACCTTGTA...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACTACAAGGTGGCTTTGTaGTACCCAGACGGGTACTGG +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNYKVAL*YPDGYW
Trigger: CCAGTACCCGTCTGGGTACCACAAAGCCACCTTGTA...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACGGTGATGGTACAAGGTaGCTTTGTGGTACCCAGACG +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNGDGTR*LCGTQT
Trigger: CGTCTGGGTACCACAAAGCCACCTTGTACCATCACC...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAATCCTCCGCATCGCCTaGAGGGGAGGCTCATTGAAG +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRILRIA*RGGSLK
Trigger: CTTCAATGAGCCTCCCCTCCAGGCGATGCGGAGGAT...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGGTCCCACCAATTGGCTaGTCTAGAATGCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWVPPIG*SRMHRP
Trigger: AGGCCTGTGCATTCTAGACCAGCCAATTGGTGGGAC...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGCACACCGGCTGTCAGTaGAGAGATGCCTGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLHTGCQ*RDACLR
Trigger: TCTTAAACAGGCATCTCTCCACTGACAGCCGGTGTG...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACGAATGCATGAACATCTaGTGGCCGGCTGTCAGCGAA +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNECMNI*WPAVSE
Trigger: TTCGCTGACAGCCGGCCACCAGATGTTCATGCATTC...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378429.3
3UTR CAA 72 bp GATCCTAGCACTGAAATTGCTCCCTGGGAGGGAAATTaGGCCACAAGGGAACATTGTACCCATTTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: DPSTEIAPWEGN*ATREHCTHLRK
Trigger: CTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGAGCAATTTCAGTGCTAGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR CAA 72 bp TTTTGGGAACTGAATCCAATGATCCTAGCACTGAAATaGCTCCCTGGGAGGGAAATTTGGCCACAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: FWELNPMILALK*LPGREIWPQGN
Trigger: GTTCCCTTGTGGCCAAATTTCCCTCCCAGGGAGCAATTTCAGTGCTAGGATCATTGGATTCAGTTCCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTGATGGGTGTGATGCATaGAGGGTCCACCATAGGCTT +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFDGCDA*RVHHRL
Trigger: AAGCCTATGGTGGACCCTTCATGCATCACACCCATC...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTGCATACGATGCCGGTTaGGCCTTCCCCGATTTTGAT +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFAYDAG*AFPDFD
Trigger: ATCAAAATCGGGGAAGGCTCAACCGGCATCGTATGC...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTTCATTTCTATCACCATaGTCCCGAGGGACCAGATGT +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSISFLSP*SRGTRC
Trigger: ACATCTGGTCCCTCGGGATCATGGTGATAGAAATGA...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGTCATTTCTATCACCATaGTCCCGAGGGACCAGATGT +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLSFLSP*SRGTRC
Trigger: ACATCTGGTCCCTCGGGATCATGGTGATAGAAATGA...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGGAATCCTCTGCTCAGTaGTGCCTGTATTGTCTCATG +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLESSAQ*CLYCLM
Trigger: CATGAGACAATACAGGCATCACTGAGCAGAGGATTC...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACAAAGCTGACGGTGATTaGGAGTCATTCAGTATTCAA +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHKADGD*ESFSIQ
Trigger: TTGAATACTGAATGACTCTCAATCACCGTCAGCTTT...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTCCATGGGGCTGGATATaGTTATACTGGGAGACAGAA +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIPWGWI*LYWETE
Trigger: TTCTGTCTCCCAGTATAATCATATCCAGCCCCATGG...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378423.5
CDS-3UTR GCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTAGGCCGGTAAACTTCTaGTCTTGTGGATCAAACCCA +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIRPVNF*SCGSNP
Trigger: TGGGTTTGATCCACAAGAGCAGAAGTTTACCGGCCT...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGAGGCCGGTAAACTTCTaGTCTTGTGGATCAAACCCA +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLRPVNF*SCGSNP
Trigger: TGGGTTTGATCCACAAGAGCAGAAGTTTACCGGCCT...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTATTACGTGCCCATTTTaGTTGGCTGCGTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFITCPF*LAAWLP
Trigger: AGGCAGCCACGCAGCCAAGCAAAATGGGCACGTAAT...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAGCACCCGCTGGTCCCTaGAGTTCTAGAAGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRAPAGP*SSRRCE
Trigger: TTCACACCTTCTAGAACTGCAGGGACCAGCGGGTGC...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGGCTGAGGACCATCTGTaGTCGATCGTAATCCACCTT +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWAEDHL*SIVIHL
Trigger: AAGGTGGATTACGATCGAGCACAGATGGTCCTCAGC...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGAGGAATAGCCCGATTTaGTTTGACTTTGAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGRNSPI*FDFEVV
Trigger: AACTACCTCAAAGTCAAAGCAAATCGGGCTATTCCT...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAGTTCTCGTCTCTGTTaGTTCCGGAGGTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGSSRLC*FRRSIF
Trigger: GAAAATGGACCTCCGGAAGCAACAGAGACGAGAACT...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACCGCCGACAAGGTAGCTaGTGTACATGTCAACCACAT +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNRRQGS*CTCQPH
Trigger: ATGTGGTTGACATGTACAGCAGCTACCTTGTCGGCG...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGCGCCGACAAGGTAGCTaGTGTACATGTCAACCACAT +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWRRQGS*CTCQPH
Trigger: ATGTGGTTGACATGTACAGCAGCTACCTTGTCGGCG...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGACCTACACGAATCCTCTaGTCAGTGATGCCTGTATTG +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGPTRIL*SVMPVL
Trigger: CAATACAGGCATCACTGAGCAGAGGATTCGTGTAGG...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACGGAAACATTGTGGTGTaGAAAAGAATGGTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHGNIVV*KRMVCY
Trigger: GTAGCAAACCATTCTTTTGCACACCACAATGTTTCC...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGTTCATAGGAGCCAGCTaGATGGGTGTGATGCATGAA +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLFIGAS*MGVMHE
Trigger: TTCATGCATCACACCCATCCAGCTGGCTCCTATGAA...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGCAGGTACGAAGACTTTaGCCTCCTGTCATAGTCATC +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLQVRRL*PPVIVI
Trigger: GATGACTATGACAGGAGGCCAAAGTCTTCGTACCTG...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTTTGGAATGCACATTGTaGGCTCGGACAAGCGAGGGT +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFLECTL*ARTSEG
Trigger: ACCCTCGCTTGTCCGAGCCCACAATGTGCATTCCAA...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGACGCTTGTCAGGAGGATaGAGTCACTTTTTATGTCCC +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGRLSGG*SHFLCP
Trigger: GGGACATAAAAAGTGACTCCATCCTCCTGACAAGCG...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTCGCTTGTCAGGAGGATaGAGTCACTTTTTATGTCCC +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIRLSGG*SHFLCP
Trigger: GGGACATAAAAAGTGACTCCATCCTCCTGACAAGCG...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAACTGAAATTGCTCCCTaGGAGGGAAATTTGGCCACA +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGTEIAP*EGNLAT
Trigger: TGTGGCCAAATTTCCCTCCCAGGGAGCAATTTCAGT...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTTCTGATACTCCCACTTaGGGTCACTGTATTCACTTG +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSISDTPT*GHCIHL
Trigger: CAAGTGAATACAGTGACCTCAAGTGGGAGTATCAGA...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGTCTGATACTCCCACTTaGGGTCACTGTATTCACTTG +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLSDTPT*GHCIHL
Trigger: CAAGTGAATACAGTGACCTCAAGTGGGAGTATCAGA...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAGCATACGATGCCGGTTaGGCCTTCCCCGATTTTGAT +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRAYDAG*AFPDFD
Trigger: ATCAAAATCGGGGAAGGCTCAACCGGCATCGTATGC...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACTTTGAGAAAGGGCACTaGGGGAAACATTGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNFEKGH*GKHCGV
Trigger: CACACCACAATGTTTCCCTCAGTGCCCTTTCTCAAA...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGTTCCAGCACGATACATaGACAATAGCGATTAATACT +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGFQHDT*TIAINT
Trigger: AGTATTAATCGCTATTGTTCATGTATCGTGCTGGAA...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGATACAATCTGTCTCATaGACATTTAGGACTGCCATT +
Preference number: 4 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGIQSVS*TFRTAI
Trigger: AATGGCAGTCCTAAATGTTCATGAGACAGATTGTAT...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACAATCCACCTTTGGAATaGACATTGTGGGCTCGGACA +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNNPPLE*TLWART
Trigger: TGTCCGAGCCCACAATGTGCATTCCAAAGGTGGATT...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGAATCCACCTTTGGAATaGACATTGTGGGCTCGGACA +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWNPPLE*TLWART
Trigger: TGTCCGAGCCCACAATGTGCATTCCAAAGGTGGATT...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTGCTGAGGACCATCTGTaGTCGATCGTAATCCACCTT +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFAEDHL*SIVIHL
Trigger: AAGGTGGATTACGATCGAGCACAGATGGTCCTCAGC...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTACGGGTACTGGTGACTaGTTGAGGAATAGCCCGATT +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFTGTGD*LRNSPI
Trigger: AATCGGGCTATTCCTCAAGCAGTCACCAGTACCCGT...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAAGATGTACTGCGAACTaGTCTGCAGGGAGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRRCTAN*SAGRGD
Trigger: ATCACCCCTCCCTGCAGAGCAGTTCGCAGTACATCT...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACAGTTCTCGTCTCTGTTaGTTCCGGAGGTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNSSRLC*FRRSIF
Trigger: GAAAATGGACCTCCGGAAGCAACAGAGACGAGAACT...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGCCTACACGAATCCTCTaGTCAGTGATGCCTGTATTG +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWPTRIL*SVMPVL
Trigger: CAATACAGGCATCACTGAGCAGAGGATTCGTGTAGG...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGGACTCCAGAGGAGTGTaGCTATTTCTATTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLDSRGV*LFLFCN
Trigger: GTTGCAGAATAGAAATAGCCACACTCCTCTGGAGTC...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGACCCTGTGTTCAAAGTTaGACGGGCCAGATATTTCAA +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGPCVQS*TGQIFQ
Trigger: TTGAAATATCTGGCCCGTCCAACTTTGAACACAGGG...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGACTCCCTGATCTGGGGTaGGTGGGCTTTCTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRLPDLG*VGFLSL
Trigger: TAAGGAAAGAAAGCCCACCCACCCCAGATCAGGGAG...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACCAGGTACGAAGACTTTaGCCTCCTGTCATAGTCATC +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNQVRRL*PPVIVI
Trigger: GATGACTATGACAGGAGGCCAAAGTCTTCGTACCTG...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGCAGGTACGAAGACTTTaGCCTCCTGTCATAGTCATC +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWQVRRL*PPVIVI
Trigger: GATGACTATGACAGGAGGCCAAAGTCTTCGTACCTG...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTGAGTGTCCTTGGGGATaGGTTTTAAATGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIECPWG*VLNALA
Trigger: AGCAAGTGCATTTAAAACCCATCCCCAAGGACACTC...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAATCGTAATCCACCTTTaGAATGCACATTGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGIVIHL*NAHCGL
Trigger: GAGCCCACAATGTGCATTCCAAAGGTGGATTACGAT...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGATCTTCGGCACCTCTTTaGAAACTTGAGCACAGAAAC +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGSSAPL*KLEHRN
Trigger: GTTTCTGTGCTCAAGTTTCCAAAGAGGTGCCGAAGA...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAGTCCCACCAATTGGCTaGTCTAGAATGCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRVPPIG*SRMHRP
Trigger: AGGCCTGTGCATTCTAGACCAGCCAATTGGTGGGAC...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTTATGATGGCTGTGGATaGATTAAAGACTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIYDGCG*IKDSRG
Trigger: TCCTCTGGAGTCTTTAATTCATCCACAGCCATCATA...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGTATGATGGCTGTGGATaGATTAAAGACTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLYDGCG*IKDSRG
Trigger: TCCTCTGGAGTCTTTAATTCATCCACAGCCATCATA...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGGGATCAAACCCAGTATaGACCCTGTGTTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWGSNPV*TLCSKL
Trigger: CAACTTTGAACACAGGGTTCATACTGGGTTTGATCC...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGTCTGATACTCCCACTTaGGGTCACTGTATTCACTTG +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWSDTPT*GHCIHL
Trigger: CAAGTGAATACAGTGACCTCAAGTGGGAGTATCAGA...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAGTACTGGTGACTGCTTaGGGAATAGCCCGATTTGCT +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRVLVTA*GIARFA
Trigger: AGCAAATCGGGCTATTCCTCAAGCAGTCACCAGTAC...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGATCATTCATTCTGGTGTaGGTCACAATGTCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGSFILV*VTMSVK
Trigger: CTTGACAGACATTGTGACTCACACCAGAATGAATGA...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAGAGAGCTCTCAGAACTaGCAGGCAGACAGTAGCTAT +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRESSQN*QADSSY
Trigger: ATAGCTACTGTCTGCCTGTCAGTTCTGAGAGCTCTC...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTGAATCCTCTGCTCAGTaGTGCCTGTATTGTCTCATG +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFESSAQ*CLYCLM
Trigger: CATGAGACAATACAGGCATCACTGAGCAGAGGATTC...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTAGGCCGGTAAACTTCTaGTCTTGTGGATCAAACCCA +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFRPVNF*SCGSNP
Trigger: TGGGTTTGATCCACAAGAGCAGAAGTTTACCGGCCT...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGTTCATTTTCATTACGTaGCCATTTTGCTTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLFIFIT*PFCLAA
Trigger: CGCAGCCAAGCAAAATGGGCACGTAATGAAAATGAA...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGGGGATGGGTTTTAAATaGACTTGCTCCAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLGMGFK*TCSKWH
Trigger: ATGCCATTTGGAGCAAGTGCATTTAAAACCCATCCC...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTCTGTCAGTGGAGAGATaGCTGTTTAAGACACAAGAA +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSILSVER*LFKTQE
Trigger: TTCTTGTGTCTTAAACAGGCATCTCTCCACTGACAG...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTTCCTACATGTTACCCTaGATGTGGCTAGGATATATC +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSISYMLP*MWLGYI
Trigger: GATATATCCTAGCCACATGCAGGGTAACATGTAGGA...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGATCCTACATGTTACCCTaGATGTGGCTAGGATATATC +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGSYMLP*MWLGYI
Trigger: GATATATCCTAGCCACATGCAGGGTAACATGTAGGA...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTTGGATTAATGAAACGTaGACACCATCACCATCACTC +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIWINET*TPSPSL
Trigger: GAGTGATGGTGATGGTGTGCACGTTTCATTAATCCA...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACGGAAGAGGTTGGAACTaGAGACACAGATTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNGRGWN*RHRFGD
Trigger: ATCACCAAATCTGTGTCTGCAGTTCCAACCTCTTCC...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378423.5
CDS-3UTR CCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGTCTGCAACTTTTCGCTaGTGCTTGTCAGTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWSATFR*CLSVFF
Trigger: GAAGAAGACTGACAAGCACCAGCGAAAAGTTGCAGA...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACCCCTGTGTTCAAAGTTaGACGGGCCAGATATTTCAA +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNPCVQS*TGQIFQ
Trigger: TTGAAATATCTGGCCCGTCCAACTTTGAACACAGGG...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGACTTTCCTTAGGGAGTTaGAGCGAGTCACCGAGATGT +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRLSLGS*SESPRC
Trigger: ACATCTCGGTGACTCGCTCCAACTCCCTAAGGAAAG...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGGAGTGTCCTTGGGGATaGGTTTTAAATGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWECPWG*VLNALA
Trigger: AGCAAGTGCATTTAAAACCCATCCCCAAGGACACTC...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTTGGTGTGCAAAAGAATaGTTTGCTACTAGAGGCGTT +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIWCAKE*FATRGV
Trigger: AACGCCTCTAGTAGCAAACCATTCTTTTGCACACCA...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTCCTGGGAGGGAAATTTaGCCACAAGGGAACATTGTA +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFPGREI*PQGNIV
Trigger: TACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGG...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTACTGAAATTGCTCCCTaGGAGGGAAATTTGGCCACA +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFTEIAP*EGNLAT
Trigger: TGTGGCCAAATTTCCCTCCCAGGGAGCAATTTCAGT...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTGGATCAAACCCAGTATaGACCCTGTGTTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFGSNPV*TLCSKL
Trigger: CAACTTTGAACACAGGGTTCATACTGGGTTTGATCC...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGTCATTCATTCTGGTGTaGGTCACAATGTCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWSFILV*VTMSVK
Trigger: CTTGACAGACATTGTGACTCACACCAGAATGAATGA...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTAAAGCTGACGGTGATTaGGAGTCATTCAGTATTCAA +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIKADGD*ESFSIQ
Trigger: TTGAATACTGAATGACTCTCAATCACCGTCAGCTTT...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGATTTGAGAAAGGGCACTaGGGGAAACATTGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRFEKGH*GKHCGV
Trigger: CACACCACAATGTTTCCCTCAGTGCCCTTTCTCAAA...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGAAAAATGGTGACAAATaGAACCAAACGTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLKNGDK*NQTSCP
Trigger: AGGGCAAGACGTTTGGTTTCATTTGTCACCATTTTT...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTAAAAATGGTGACAAATaGAACCAAACGTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIKNGDK*NQTSCP
Trigger: AGGGCAAGACGTTTGGTTTCATTTGTCACCATTTTT...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGGCAACTTTTCGCTGGTaGTTGTCAGTCTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWATFRW*LSVFFI
Trigger: AATGAAGAAGACTGACAAGCACCAGCGAAAAGTTGC...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTTGGCTATTTCTATTCTaGAACTTTTCGCTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIWLFLF*NFSLVL
Trigger: AAGCACCAGCGAAAAGTTGCAGAATAGAAATAGCCA...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACTTCATTTTCATTACGTaGCCATTTTGCTTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNFIFIT*PFCLAA
Trigger: CGCAGCCAAGCAAAATGGGCACGTAATGAAAATGAA...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGGGGATGGGTTTTAAATaGACTTGCTCCAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWGMGFK*TCSKWH
Trigger: ATGCCATTTGGAGCAAGTGCATTTAAAACCCATCCC...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACGTCCATTTTCTTCACTaGAACTTGTTTCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNVHFLH*NLFPCV
Trigger: CACACAGGGAAACAAGTTGCAGTGAAGAAAATGGAC...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGACCATCCAGTAGGGAGTaGCAACCAATGATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRPSSRE*QPMISS
Trigger: AGAGGAAATCATTGGTTGGCACTCCCTACTGGATGG...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGCTGTCAGTGGAGAGATaGCTGTTTAAGACACAAGAA +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWLSVER*LFKTQE
Trigger: TTCTTGTGTCTTAAACAGGCATCTCTCCACTGACAG...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACTCCTACATGTTACCCTaGATGTGGCTAGGATATATC +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNSYMLP*MWLGYI
Trigger: GATATATCCTAGCCACATGCAGGGTAACATGTAGGA...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACTGGATTAATGAAACGTaGACACCATCACCATCACTC +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNWINET*TPSPSL
Trigger: GAGTGATGGTGATGGTGTGCACGTTTCATTAATCCA...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAGGAAACATTGTGGTGTaGAAAAGAATGGTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGGNIVV*KRMVCY
Trigger: GTAGCAAACCATTCTTTTGCACACCACAATGTTTCC...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGGGCCTACAGTTAACATaGAAATTCATCCAACAAGCA +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLGLQLT*KFIQQA
Trigger: TGCTTGTTGGATGAATTTGCATGTTAACTGTAGGCC...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAACTTCTGCTCTTGTaGATCAAACCCAGTATGAAC +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGKLLLL*IKPSMN
Trigger: GTTCATACTGGGTTTGATCCACAAGAGCAGAAGTTT...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTAAACTTCTGCTCTTGTaGATCAAACCCAGTATGAAC +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIKLLLL*IKPSMN
Trigger: GTTCATACTGGGTTTGATCCACAAGAGCAGAAGTTT...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGATTCATAGGAGCCAGCTaGATGGGTGTGATGCATGAA +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRFIGAS*MGVMHE
Trigger: TTCATGCATCACACCCATCCAGCTGGCTCCTATGAA...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAGATTCGCTGGAATACTaGGAGAAGGTGATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRDSLEY*EKVMKP
Trigger: TGGCTTCATCACCTTCTCCCAGTATTCCAGCGAATC...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTGAGTGTCCTTGGGGATaGGTTTTAAATGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFECPWG*VLNALA
Trigger: AGCAAGTGCATTTAAAACCCATCCCCAAGGACACTC...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTATCGTAATCCACCTTTaGAATGCACATTGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFIVIHL*NAHCGL
Trigger: GAGCCCACAATGTGCATTCCAAAGGTGGATTACGAT...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGGTTCTTCATTCATTCTaGTGTGAGTCACAATGTCTG +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLVLHSF*CESQCL
Trigger: CAGACATTGTGACTCACACCAGAATGAATGAAGAAC...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAGTTCTTCATTCATTCTaGTGTGAGTCACAATGTCTG +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGVLHSF*CESQCL
Trigger: CAGACATTGTGACTCACACCAGAATGAATGAAGAAC...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGACGCTTGTCAGGAGGATaGAGTCACTTTTTATGTCCC +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRRLSGG*SHFLCP
Trigger: GGGACATAAAAAGTGACTCCATCCTCCTGACAAGCG...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGCTTTATCCCAAGGAGTaGTATACTGTGGCTCAAATT +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLLYPKE*YTVAQI
Trigger: AATTTGAGCCACAGTATACCACTCCTTGGGATAAAG...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTCTTTATCCCAAGGAGTaGTATACTGTGGCTCAAATT +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSILYPKE*YTVAQI
Trigger: AATTTGAGCCACAGTATACCACTCCTTGGGATAAAG...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACTGGTGTGCAAAAGAATaGTTTGCTACTAGAGGCGTT +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNWCAKE*FATRGV
Trigger: AACGCCTCTAGTAGCAAACCATTCTTTTGCACACCA...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGACCTGGGAGGGAAATTTaGCCACAAGGGAACATTGTA +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRPGREI*PQGNIV
Trigger: TACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGG...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGATTCTCATGGTCTCACTaGAACATTCTATTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: RETLWCAKEWFATRGVHGFSWSH*NILFWE
Trigger: TTCCCAAAATAGAATGTTTCAGTGAGACCATGAGAA...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACAAAAATGGTGACAAATaGAACCAAACGTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNKNGDK*NQTSCP
Trigger: AGGGCAAGACGTTTGGTTTCATTTGTCACCATTTTT...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGTTCCAGCACGATACATaGACAATAGCGATTAATACT +
Preference number: 4 (lower is better)
Translates to: KMVTNETKRLALFSPLPLFQHDT*TIAINT
Trigger: AGTATTAATCGCTATTGTTCATGTATCGTGCTGGAA...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTATACAATCTGTCTCATaGACATTTAGGACTGCCATT +
Preference number: 4 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIIQSVS*TFRTAI
Trigger: AATGGCAGTCCTAAATGTTCATGAGACAGATTGTAT...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACTGGCTATTTCTATTCTaGAACTTTTCGCTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNWLFLF*NFSLVL
Trigger: AAGCACCAGCGAAAAGTTGCAGAATAGAAATAGCCA...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTTTCATTTTCATTACGTaGCCATTTTGCTTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFFIFIT*PFCLAA
Trigger: CGCAGCCAAGCAAAATGGGCACGTAATGAAAATGAA...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGGGCCTACAGTTAACATaGAAATTCATCCAACAAGCA +
Preference number: 4 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWGLQLT*KFIQQA
Trigger: TGCTTGTTGGATGAATTTGCATGTTAACTGTAGGCC...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGATCTGCAACTTTTCGCTaGTGCTTGTCAGTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRSATFR*CLSVFF
Trigger: GAAGAAGACTGACAAGCACCAGCGAAAAGTTGCAGA...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTTGGTGTGCAAAAGAATaGTTTGCTACTAGAGGCGTT +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFWCAKE*FATRGV
Trigger: AACGCCTCTAGTAGCAAACCATTCTTTTGCACACCA...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACTTCTCATGGTCTCACTaGAACATTCTATTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNFSWSH*NILFWE
Trigger: TTCCCAAAATAGAATGTTTCAGTGAGACCATGAGAA...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR TCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACATACAATCTGTCTCATaGACATTTAGGACTGCCATT +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNIQSVS*TFRTAI
Trigger: AATGGCAGTCCTAAATGTTCATGAGACAGATTGTAT...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAGGTTTTAAATGCACTTaGTCCAAATGGCATCATCGG +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRGFKCT*SKWHHR
Trigger: CCGATGATGCCATTTGGAGCAAGTGCATTTAAAACC...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAGTCCATTTTCTTCACTaGAACTTGTTTCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRVHFLH*NLFPCV
Trigger: CACACAGGGAAACAAGTTGCAGTGAAGAAAATGGAC...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTGGCCTACAGTTAACATaGAAATTCATCCAACAAGCA +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFGLQLT*KFIQQA
Trigger: TGCTTGTTGGATGAATTTGCATGTTAACTGTAGGCC...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAGCATCCAGCGAAAGTTaGAAATACAGCTTTGATGCT +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRASSES*KYSFDA
Trigger: AGCATCAAAGCTGTATTTCCAACTTTCGCTGGATGC...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378423.5
CDS-3UTR GCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGATGGCTATTTCTATTCTaGAACTTTTCGCTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRWLFLF*NFSLVL
Trigger: AAGCACCAGCGAAAAGTTGCAGAATAGAAATAGCCA...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR GCA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAAGGAATAGCCCGATTTaGTTTGACTTTGAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRRNSPI*FDFEVV
Trigger: AACTACCTCAAAGTCAAAGCAAATCGGGCTATTCCT...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACCTTCAACTGATACAATaGCTACATGACATCAAAGTA +
Preference number: 4 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNLQLIQ*LHDIKV
Trigger: TACTTTGATGTCATGTAGCCATTGTATCAGTTGAAG...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR CAA 72 bp CCTGGAATTCTCATGGTCTCACTGAAACATTCTATTTaGGGAACTGAATCCAATGATCCTAGCACTGAAATT +
Preference number: 4 (lower is better)
Translates to: PGILMVSLKHSI*GTESNDPSTEI
Trigger: AATTTCAGTGCTAGGATCATTGGATTCAGTTCCCAAAATAGAATGTTTCAGTGAGACCATGAGAATTCCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CCA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTCTTCAACTGATACAATaGCTACATGACATCAAAGTA +
Preference number: 4 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFLQLIQ*LHDIKV
Trigger: TACTTTGATGTCATGTAGCCATTGTATCAGTTGAAG...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
3UTR CAA 72 bp TATATCATAACGGAGTTTGTACTGAGTCCTTCTGATTaGCTGGATGAAGGGCTGAAAAATATAATAATGACT +
Preference number: 4 (lower is better)
Translates to: YIITEFVLSPSD*LDEGLKNIIMT
Trigger: AGTCATTATTATATTTTTCAGCCCTTCATCCAGCAAATCAGAAGGACTCAGTACAAACTCCGTTATGATATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS GCA 90 bp TGGCCGGCTGTCAGCGAAGCGGCGGTGCCTCAGCCCCTTCTCAGCTaGTACAGCGCTCCCAGCGCCATGTTCCCGGTCTCCCCGGGCGCA +
Preference number: 5 (lower is better)
Translates to: WPAVSEAAVPQPLLS*YSAPSAMFPVSPGA
Trigger: TGCGCCCGGGGAGACCGGGAACATGGCGCTGGGAGCGCTGTAGCAGCTGAGAAGGGGCTGAGGCACCGCCGCTTCGCTGACAGCCGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353224.10
ENST00000378429.3
CDS GCA 90 bp TCACCACAGTGTATTTCTGGTGGCCGGCTGTCAGCGAAGCGGCGGTaGCTCAGCCCCTTCTCAGCTGCTACAGCGCTCCCAGCGCCATGT +
Preference number: 5 (lower is better)
Translates to: SPQCISGGRLSAKRR*LSPFSAATALPAPC
Trigger: ACATGGCGCTGGGAGCGCTGTAGCAGCTGAGAAGGGGCTGAGGCACCGCCGCTTCGCTGACAGCCGGCCACCAGAAATACACTGTGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353224.10
CDS CCA 90 bp TCGGTTCCTGGAGTCCCGAGCCTGACCTGGACCTCTGCCGCATGGTaGGCTGAGGGCTTGTCTGATTCAGGTACGAAGACTTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SVPGVPSLTWTSAAW*AEGLSDSGTKTLAS
Trigger: GGAGGCCAAAGTCTTCGTACCTGAATCAGACAAGCCCTCAGCCCACCATGCGGCAGAGGTCCAGGTCAGGCTCGGGACTCCAGGAACCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGATACGCCAGGCTCTCCTaGGAGCACCCGCTGGTCCCT +
Preference number: 5 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRYARLS*EHPLVP
Trigger: AGGGACCAGCGGGTGCTCCAAGGAGAGCCTGGCGTA...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS TCA 90 bp AAGCCATTTTCTTCCGCGTGGCCTGGACCGTGGCTGGAGGCTCCCTaGTCTGGGGTGGGTGGGCTTTCTTTCCTTAGGGAGTTGGAGCGA +
Preference number: 5 (lower is better)
Translates to: KPFSSAWPGPWLEAP*SGVGGLSFLRELER
Trigger: TCGCTCCAACTCCCTAAGGAAAGAAAGCCCACCCACCCCAGATCAGGGAGCCTCCAGCCACGGTCCAGGCCACGCGGAAGAAAATGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 90 bp GGAATACTGGGAGAAGGTGATGAAGCCATTTTCTTCCGCGTGGCCTaGACCGTGGCTGGAGGCTCCCTGATCTGGGGTGGGTGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: GILGEGDEAIFFRVA*TVAGGSLIWGGWAF
Trigger: GAAAGCCCACCCACCCCAGATCAGGGAGCCTCCAGCCACGGTCCAGGCCACGCGGAAGAAAATGGCTTCATCACCTTCTCCCAGTATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 90 bp TCATCGGTTCCTGGAGTCCCGAGCCTGACCTGGACCTCTGCCGCATaGTGGGCTGAGGGCTTGTCTGATTCAGGTACGAAGACTTTGGCC +
Preference number: 5 (lower is better)
Translates to: SSVPGVPSLTWTSAA*WAEGLSDSGTKTLA
Trigger: GGCCAAAGTCTTCGTACCTGAATCAGACAAGCCCTCAGCCCACCATGCGGCAGAGGTCCAGGTCAGGCTCGGGACTCCAGGAACCGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS TCA 90 bp TGCACTTGCTCCAAATGGCATCATCGGTTCCTGGAGTCCCGAGCCTaGCCTGGACCTCTGCCGCATGGTGGGCTGAGGGCTTGTCTGATT +
Preference number: 5 (lower is better)
Translates to: CTCSKWHHRFLESRA*PGPLPHGGLRACLI
Trigger: AATCAGACAAGCCCTCAGCCCACCATGCGGCAGAGGTCCAGGTCAGGCTCGGGACTCCAGGAACCGATGATGCCATTTGGAGCAAGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS TCA 90 bp TGGCAGGGCCCCTGGGGTAGGTGTCAGACCCTGACAGTGGAGGGCTaGGGACCATCTGTGCTCGATCGTAATCCACCTTTGGAATGCACA +
Preference number: 5 (lower is better)
Translates to: WQGPWGRCQTLTVEG*GPSVLDRNPPLECT
Trigger: TGTGCATTCCAAAGGTGGATTACGATCGAGCACAGATGGTCCTCAGCCCTCCACTGTCAGGGTCTGACACCTACCCCAGGGGCCCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 90 bp GACTGCTTGAGGAATAGCCCGATTTGCTTTGACTTTGAGGTAGTTTaGCAGGGCCCCTGGGGTAGGTGTCAGACCCTGACAGTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: DCLRNSPICFDFEVV*QGPWGRCQTLTVEG
Trigger: GCCCTCCACTGTCAGGGTCTGACACCTACCCCAGGGGCCCTGCCAAACTACCTCAAAGTCAAAGCAAATCGGGCTATTCCTCAAGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS GCA 90 bp GGTACCCAGACGGGTACTGGTGACTGCTTGAGGAATAGCCCGATTTaGTTTGACTTTGAGGTAGTTTGGCAGGGCCCCTGGGGTAGGTGT +
Preference number: 5 (lower is better)
Translates to: GTQTGTGDCLRNSPI*FDFEVVWQGPWGRC
Trigger: ACACCTACCCCAGGGGCCCTGCCAAACTACCTCAAAGTCAAAGCAAATCGGGCTATTCCTCAAGCAGTCACCAGTACCCGTCTGGGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 90 bp AGGCTCCCTGATCTGGGGTGGGTGGGCTTTCTTTCCTTAGGGAGTTaGAGCGAGTCACCGAGATGTTGTCAAAATCCTCTAGCAGGCCGT +
Preference number: 5 (lower is better)
Translates to: RLPDLGWVGFLSLGS*SESPRCCQNPLAGR
Trigger: ACGGCCTGCTAGAGGATTTTGACAACATCTCGGTGACTCGCTCCAACTCCCTAAGGAAAGAAAGCCCACCCACCCCAGATCAGGGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAATAGGCTTTGGCCTGTaGGCCGTATCTGCTAACAGG +
Preference number: 5 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRIGFGL*AVSANR
Trigger: CCTGTTAGCAGATACGGCCAACAGGCCAAAGCCTAT...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGATCTTTCCTTAGGGAGTaGGAGCGAGTCACCGAGATG +
Preference number: 5 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRSFLRE*ERVTEM
Trigger: CATCTCGGTGACTCGCTCCAACTCCCTAAGGAAAGA...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAACGCTGTCCCACCAATaGGCTGGTCTAGAATGCACA +
Preference number: 5 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRTLSHQ*AGLECT
Trigger: TGTGCATTCTAGACCAGCCAATTGGTGGGACAGCGT...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 90 bp GATTCAGGTACGAAGACTTTGGCCTCCTGTCATAGTCATCCAGGCTaGGTCCCCATTCACTTTCACTGTACGCCAGGCTCTCCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: DSGTKTLASCHSHPG*VPIHFHCTPGSPWS
Trigger: GCTCCAAGGAGAGCCTGGCGTACAGTGAAAGTGAATGGGGACCCAGCCTGGATGACTATGACAGGAGGCCAAAGTCTTCGTACCTGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 90 bp AGATGTACTGCGAACTGCTCTGCAGGGAGGGGTGATGGTACAAGGTaGCTTTGTGGTACCCAGACGGGTACTGGTGACTGCTTGAGGAAT +
Preference number: 5 (lower is better)
Translates to: RCTANCSAGRGDGTR*LCGTQTGTGDCLRN
Trigger: ATTCCTCAAGCAGTCACCAGTACCCGTCTGGGTACCACAAAGCCACCTTGTACCATCACCCCTCCCTGCAGAGCAGTTCGCAGTACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGACAGTTCTCGTCTCTGTaGCTTCCGGAGGTCCATTTT +
Preference number: 5 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRQFSSL*LPEVHF
Trigger: AAAATGGACCTCCGGAAGCAACAGAGACGAGAACTG...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAACCCTGTGTTCAAAGTaGGACGGGCCAGATATTTCA +
Preference number: 5 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRTLCSK*DGPDIS
Trigger: TGAAATATCTGGCCCGTCCAACTTTGAACACAGGGT...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACACGTGCCCATTTTGCTaGGCTGCGTGGCTGCCTCTA +
Preference number: 5 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHTCPFC*AAWLPL
Trigger: TAGAGGCAGCCACGCAGCCAAGCAAAATGGGCACGT...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACCATTACGTGCCCATTTaGCTTGGCTGCGTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHHYVPI*LGCVAA
Trigger: GGCAGCCACGCAGCCAAGCAAAATGGGCACGTAATG...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAGGTCACTGTATTCACTaGGTTTGCTCAGTGAGTCCA +
Preference number: 5 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRGHCIH*VCSVSP
Trigger: TGGACTCACTGAGCAAACCAAGTGAATACAGTGACC...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGATACGCCAGGCTCTCCTaGGAGCACCCGCTGGTCCCT +
Preference number: 5 (lower is better)
Translates to: RETLWCAKEWFATRGVHGYARLS*EHPLVP
Trigger: AGGGACCAGCGGGTGCTCCAAGGAGAGCCTGGCGTA...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGATCAGGTACGAAGACTTaGGCCTCCTGTCATAGTCAT +
Preference number: 5 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRSGTKT*ASCHSH
Trigger: ATGACTATGACAGGAGGCCAAAGTCTTCGTACCTGA...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAGTTGTAGGAGTGTCCTaGGGGATGGGTTTTAAATGC +
Preference number: 5 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRVVGVS*GMGFKC
Trigger: GCATTTAAAACCCATCCCCAAGGACACTCCTACAAC...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGACCTGTGAATCACTCCTaGGTTATGAAGGTAGGAGAG +
Preference number: 5 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRPVNHS*VMKVGE
Trigger: CTCTCCTACCTTCATAACCAAGGAGTGATTCACAGG...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAGCACTGAGGGAAACATaGTGGTGTGCAAAAGAATGG +
Preference number: 5 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRALRET*WCAKEW
Trigger: CCATTCTTTTGCACACCACAATGTTTCCCTCAGTGC...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAGAACATTGTACCCATTaGAGAAAGGGCACTGAGGGA +
Preference number: 5 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSREHCTH*RKGTEG
Trigger: TCCCTCAGTGCCCTTTCTCAAATGGGTACAATGTTC...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS GCA 90 bp GTAGGTGTAGGAGTTGTAGGAGTGTCCTTGGGGATGGGTTTTAAATaGACTTGCTCCAAATGGCATCATCGGTTCCTGGAGTCCCGAGCC +
Preference number: 5 (lower is better)
Translates to: VGVGVVGVSLGMGFK*TCSKWHHRFLESRA
Trigger: GGCTCGGGACTCCAGGAACCGATGATGCCATTTGGAGCAAGTGCATTTAAAACCCATCCCCAAGGACACTCCTACAACTCCTACACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAGGTAAACTTCTGCTCTaGTGGATCAAACCCAGTATG +
Preference number: 5 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRGKLLL*WIKPSM
Trigger: CATACTGGGTTTGATCCACAAGAGCAGAAGTTTACC...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACTGGTGGGCTGAGGGCTaGTCTGATTCAGGTACGAAG +
Preference number: 5 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHWWAEG*SDSGTK
Trigger: CTTCGTACCTGAATCAGACAAGCCCTCAGCCCACCA...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACCCTTTGGAATGCACATaGTGGGCTCGGACAAGCGAG +
Preference number: 5 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHPLECT*WARTSE
Trigger: CTCGCTTGTCCGAGCCCACAATGTGCATTCCAAAGG...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAGAGCCTTCCCCGATTTaGATAAAGTTGGCCAAGTAT +
Preference number: 5 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSREPSPI*IKLAKY
Trigger: ATACTTGGCCAACTTTATCAAAATCGGGGAAGGCTC...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGAAGCACTGAAGAAACCTaGTGTAGGTCCTTCACTCTT +
Preference number: 5 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRSTEET*CRSFTL
Trigger: AAGAGTGAAGGACCTACACAAGGTTTCTTCAGTGCT...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTCTGTTGAACCCTGCCGGTCATCACGCTGTCCCACCAATTGGCTGGTCTAGACTGTATTCACTTGGTTaGCTCAGTGAGTCCAAATGT +
Preference number: 5 (lower is better)
Translates to: GLLNPAGHHAVPPIGWSRLYSLG*LSESKC
Trigger: ACATTTGGACTCACTGAGCAAACCAAGTGAATACAG...TCTAGACCAGCCAATTGGTGGGACAGCGTGATGACCGGCAGGGTTCAACAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACGGTACTGGTGACTGCTaGAGGAATAGCCCGATTTGC +
Preference number: 5 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHGTGDC*RNSPIC
Trigger: GCAAATCGGGCTATTCCTCAAGCAGTCACCAGTACC...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCCCTGGGAGGGAAATTaGGCCACAAGGGAACATTGT +
Preference number: 5 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGPWEGN*ATREHC
Trigger: ACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGG...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS GCA 90 bp GATGGTACAAGGTGGCTTTGTGGTACCCAGACGGGTACTGGTGACTaGTTGAGGAATAGCCCGATTTGCTTTGACTTTGAGGTAGTTTGG +
Preference number: 5 (lower is better)
Translates to: DGTRWLCGTQTGTGD*LRNSPICFDFEVVW
Trigger: CCAAACTACCTCAAAGTCAAAGCAAATCGGGCTATTCCTCAAGCAGTCACCAGTACCCGTCTGGGTACCACAAAGCCACCTTGTACCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACCGAGTCACCGAGATGTaGTCAAAATCCTCTAGCAGG +
Preference number: 5 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHRVTEM*SKSSSR
Trigger: CCTGCTAGAGGATTTTGACAACATCTCGGTGACTCG...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTACGTGCCCATTTTGCTaGGCTGCGTGGCTGCCTCTA +
Preference number: 5 (lower is better)
Translates to: LLSLCEPGILMVSLKHSITCPFC*AAWLPL
Trigger: TAGAGGCAGCCACGCAGCCAAGCAAAATGGGCACGT...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGAGATGCCCTGGTCTGTaGAACCCTGCCGGTCATCAC +
Preference number: 5 (lower is better)
Translates to: KMVTNETKRLALFSPLPLRCPGL*NPAGHH
Trigger: GTGATGACCGGCAGGGTTCAACAGACCAGGGCATCT...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGATGAAACCAAACGTCTaGCCCTGTTCTCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGMKPNV*PCSLLS
Trigger: GGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCAT...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGCATTACGTGCCCATTTaGCTTGGCTGCGTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWHYVPI*LGCVAA
Trigger: GGCAGCCACGCAGCCAAGCAAAATGGGCACGTAATG...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGTGGTGGGCTGAGGGCTaGTCTGATTCAGGTACGAAG +
Preference number: 5 (lower is better)
Translates to: KMVTNETKRLALFSPLPLWWAEG*SDSGTK
Trigger: CTTCGTACCTGAATCAGACAAGCCCTCAGCCCACCA...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGCCTTTGGAATGCACATaGTGGGCTCGGACAAGCGAG +
Preference number: 5 (lower is better)
Translates to: KMVTNETKRLALFSPLPLPLECT*WARTSE
Trigger: CTCGCTTGTCCGAGCCCACAATGTGCATTCCAAAGG...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGTGGTACAAGGTGGCTTaGTGGTACCCAGACGGGTAC +
Preference number: 5 (lower is better)
Translates to: KMVTNETKRLALFSPLPLWYKVA*WYPDGY
Trigger: GTACCCGTCTGGGTACCACAAAGCCACCTTGTACCA...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCCGATTTTGATAAAGTaGGCCAAGTATTCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGPILIK*AKYSLG
Trigger: CCCCAGGGAATACTTGGCCAACTTTATCAAAATCGG...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACGCACTGAGGGAAACATaGTGGTGTGCAAAAGAATGG +
Preference number: 5 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHALRET*WCAKEW
Trigger: CCATTCTTTTGCACACCACAATGTTTCCCTCAGTGC...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACATCCTAGCACTGAAATaGCTCCCTGGGAGGGAAATT +
Preference number: 5 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHILALK*LPGREI
Trigger: AATTTCCCTCCCAGGGAGCAATTTCAGTGCTAGGAT...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS GCA 90 bp TTATTCTCATGTCCTCATCTAGCTTTGCCACCTACACGAATCCTCTaGTCAGTGATGCCTGTATTGTCTCATGAGGGGGACGATGCAAGA +
Preference number: 5 (lower is better)
Translates to: LFSCPHLALPPTRIL*SVMPVLSHEGDDAR
Trigger: TCTTGCATCGTCCCCCTCATGAGACAATACAGGCATCACTGAGCAGAGGATTCGTGTAGGTGGCAAAGCTAGATGAGGACATGAGAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGGGTAAACTTCTGCTCTaGTGGATCAAACCCAGTATG +
Preference number: 5 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGGKLLL*WIKPSM
Trigger: CATACTGGGTTTGATCCACAAGAGCAGAAGTTTACC...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGGTTTCCTTGCAGGGTTaGTTTCCTCTAACGATTGTC +
Preference number: 5 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGVSLQG*FPLTIV
Trigger: GACAATCGTTAGAGGAAACAAACCCTGCAAGGAAAC...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTTCTTTCCTTAGGGAGTaGGAGCGAGTCACCGAGATG +
Preference number: 5 (lower is better)
Translates to: LLSLCEPGILMVSLKHSISFLRE*ERVTEM
Trigger: CATCTCGGTGACTCGCTCCAACTCCCTAAGGAAAGA...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGGGTACTGGTGACTGCTaGAGGAATAGCCCGATTTGC +
Preference number: 5 (lower is better)
Translates to: KMVTNETKRLALFSPLPLGTGDC*RNSPIC
Trigger: GCAAATCGGGCTATTCCTCAAGCAGTCACCAGTACC...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACTGGTACAAGGTGGCTTaGTGGTACCCAGACGGGTAC +
Preference number: 5 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNWYKVA*WYPDGY
Trigger: GTACCCGTCTGGGTACCACAAAGCCACCTTGTACCA...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGGAGCCTTCCCCGATTTaGATAAAGTTGGCCAAGTAT +
Preference number: 5 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGEPSPI*IKLAKY
Trigger: ATACTTGGCCAACTTTATCAAAATCGGGGAAGGCTC...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACAGCACTGAAGAAACCTaGTGTAGGTCCTTCACTCTT +
Preference number: 5 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHSTEET*CRSFTL
Trigger: AAGAGTGAAGGACCTACACAAGGTTTCTTCAGTGCT...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS GCA 90 bp CGTGCTTCATTTTCATTACGTGCCCATTTTGCTTGGCTGCGTGGCTaGCTCTATAATACGGATCCAGATCATCTCCATAGAGACTCTTCT +
Preference number: 5 (lower is better)
Translates to: RASFSLRAHFAWLRG*LYNTDPDHLHRDSS
Trigger: AGAAGAGTCTCTATGGAGATGATCTGGATCCGTATTATAGAGGCAGCCACGCAGCCAAGCAAAATGGGCACGTAATGAAAATGAAGCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 90 bp TCCAGCGAAAGTTGGAAATACAGCTTTGATGCTCAGGGAAGAGGTTaGAACTGCAGACACAGATTTGGTGATAAACATTTCAGAGGCCCC +
Preference number: 5 (lower is better)
Translates to: SSESWKYSFDAQGRG*NCRHRFGDKHFRGP
Trigger: GGGGCCTCTGAAATGTTTATCACCAAATCTGTGTCTGCAGTTCCAACCTCTTCCCTGAGCATCAAAGCTGTATTTCCAACTTTCGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378423.5
CDS-3UTR CAA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACATAGGCTTTGGCCTGTaGGCCGTATCTGCTAACAGG +
Preference number: 5 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNIGFGL*AVSANR
Trigger: CCTGTTAGCAGATACGGCCAACAGGCCAAAGCCTAT...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGTCTTTCCTTAGGGAGTaGGAGCGAGTCACCGAGATG +
Preference number: 5 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWSFLRE*ERVTEM
Trigger: CATCTCGGTGACTCGCTCCAACTCCCTAAGGAAAGA...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAACGTGCCCATTTTGCTaGGCTGCGTGGCTGCCTCTA +
Preference number: 5 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRTCPFC*AAWLPL
Trigger: TAGAGGCAGCCACGCAGCCAAGCAAAATGGGCACGT...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTCCTTTGGAATGCACATaGTGGGCTCGGACAAGCGAG +
Preference number: 5 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFPLECT*WARTSE
Trigger: CTCGCTTGTCCGAGCCCACAATGTGCATTCCAAAGG...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACTTTCTTCACTGCAACTaGTTTCCCTGTGTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHFLHCN*FPCVFL
Trigger: GAGAAACACACAGGGAAACAAGTTGCAGTGAAGAAA...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGATCAGTGATGCCTGTATaGTCTCATGAGGGGGACGAT +
Preference number: 5 (lower is better)
Translates to: RETLWCAKEWFATRGVHGSVMPV*SHEGDD
Trigger: ATCGTCCCCCTCATGAGACAATACAGGCATCACTGA...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAAGATGCCCTGGTCTGTaGAACCCTGCCGGTCATCAC +
Preference number: 5 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRRCPGL*NPAGHH
Trigger: GTGATGACCGGCAGGGTTCAACAGACCAGGGCATCT...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACCCCTGGGAGGGAAATTaGGCCACAAGGGAACATTGT +
Preference number: 5 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNPWEGN*ATREHC
Trigger: ACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGG...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS TCA 90 bp GTGAATCACTCCTTGGTTATGAAGGTAGGAGAGAGCTCTCAGAACTaGCAGGCAGACAGTAGCTATCTGTTCTTCATTCATTCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: VNHSLVMKVGESSQN*QADSSYLFFIHSGV
Trigger: CACACCAGAATGAATGAAGAACAGATAGCTACTGTCTGCCTGTCAGTTCTGAGAGCTCTCTCCTACCTTCATAACCAAGGAGTGATTCAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 90 bp TGTCAGTCTTCTTCATTTTTCCTCAGTGTTCATTTTAGCAAGAGGTaGAAGCATTTCACCACAGTGTATTTCTGGTGGCCGGCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: CQSSSFFLSVHFSKR*KHFTTVYFWWPAVS
Trigger: GCTGACAGCCGGCCACCAGAAATACACTGTGGTGAAATGCTTCCACCTCTTGCTAAAATGAACACTGAGGAAAAATGAAGAAGACTGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000353224.10
CDS-3UTR CAA 90 bp CTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGCACACTTTTCGCTGGTGCTaGTCAGTCTTCTTCATTTTT +
Preference number: 5 (lower is better)
Translates to: LGGKFGHKGTLYPFEKGHTFRWC*SVFFIF
Trigger: AAAAATGAAGAAGACTGACAAGCACCAGCGAAAAGT...GTGCCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp TCCCTGGGAGGGAAATTTGGCCACAAGGGAACATTGTACCCATTTGAGAAAGGGACTTTTCGCTGGTGCTaGTCAGTCTTCTTCATTTTT +
Preference number: 5 (lower is better)
Translates to: SLGGKFGHKGTLYPFEKGTFRWC*SVFFIF
Trigger: AAAAATGAAGAAGACTGACAAGCACCAGCGAAAAGT...CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCCAAATTTCCCTCCCAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGACCCTGTGTTCAAAGTaGGACGGGCCAGATATTTCA +
Preference number: 5 (lower is better)
Translates to: KMVTNETKRLALFSPLPLTLCSK*DGPDIS
Trigger: TGAAATATCTGGCCCGTCCAACTTTGAACACAGGGT...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTATAGGCTTTGGCCTGTaGGCCGTATCTGCTAACAGG +
Preference number: 5 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFIGFGL*AVSANR
Trigger: CCTGTTAGCAGATACGGCCAACAGGCCAAAGCCTAT...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACCGAGTCACCGAGATGTaGTCAAAATCCTCTAGCAGG +
Preference number: 5 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNRVTEM*SKSSSR
Trigger: CCTGCTAGAGGATTTTGACAACATCTCGGTGACTCG...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAGTTGTAGGAGTGTCCTaGGGGATGGGTTTTAAATGC +
Preference number: 5 (lower is better)
Translates to: RETLWCAKEWFATRGVHGVVGVS*GMGFKC
Trigger: GCATTTAAAACCCATCCCCAAGGACACTCCTACAAC...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTGATCGTAATCCACCTTaGGAATGCACATTGTGGGCT +
Preference number: 5 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIDRNPP*ECTLWA
Trigger: AGCCCACAATGTGCATTCCAAAGGTGGATTACGATC...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTGGTACTGGTGACTGCTaGAGGAATAGCCCGATTTGC +
Preference number: 5 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFGTGDC*RNSPIC
Trigger: GCAAATCGGGCTATTCCTCAAGCAGTCACCAGTACC...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGATGGTACAAGGTGGCTTaGTGGTACCCAGACGGGTAC +
Preference number: 5 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRWYKVA*WYPDGY
Trigger: GTACCCGTCTGGGTACCACAAAGCCACCTTGTACCA...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGCCGATTTTGATAAAGTaGGCCAAGTATTCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: KMVTNETKRLALFSPLPLPILIK*AKYSLG
Trigger: CCCCAGGGAATACTTGGCCAACTTTATCAAAATCGG...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTCCTGTGAATCACTCCTaGGTTATGAAGGTAGGAGAG +
Preference number: 5 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIPVNHS*VMKVGE
Trigger: CTCTCCTACCTTCATAACCAAGGAGTGATTCACAGG...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGCCTGTGAATCACTCCTaGGTTATGAAGGTAGGAGAG +
Preference number: 5 (lower is better)
Translates to: KMVTNETKRLALFSPLPLPVNHS*VMKVGE
Trigger: CTCTCCTACCTTCATAACCAAGGAGTGATTCACAGG...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACTGTCCTCATCTAGCTTaGCCACCTACACGAATCCTC +
Preference number: 5 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNCPHLA*PPTRIL
Trigger: GAGGATTCGTGTAGGTGGCAAAGCTAGATGAGGACA...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAGAACATTGTACCCATTaGAGAAAGGGCACTGAGGGA +
Preference number: 5 (lower is better)
Translates to: RETLWCAKEWFATRGVHGEHCTH*RKGTEG
Trigger: TCCCTCAGTGCCCTTTCTCAAATGGGTACAATGTTC...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGGGCCACAAGGGAACATaGTACCCATTTGAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWGHKGT*YPFEKG
Trigger: CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCC...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACGGCCACAAGGGAACATaGTACCCATTTGAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNGHKGT*YPFEKG
Trigger: CCCTTTCTCAAATGGGTACAATGTTCCCTTGTGGCC...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGATGAAACCAAACGTCTaGCCCTGTTCTCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWMKPNV*PCSLLS
Trigger: GGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCAT...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 90 bp CATTTCACCACAGTGTATTTCCAGATAGAAGCATCCAGCGAAAGTTaGAAATACAGCTTTGATGCTCAGGGAAGAGGTTGGAACTGCAGA +
Preference number: 5 (lower is better)
Translates to: HFTTVYFQIEASSES*KYSFDAQGRGWNCR
Trigger: TCTGCAGTTCCAACCTCTTCCCTGAGCATCAAAGCTGTATTTCCAACTTTCGCTGGATGCTTCTATCTGGAAATACACTGTGGTGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378423.5
CDS-3UTR CAA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACGGTCACTGTATTCACTaGGTTTGCTCAGTGAGTCCA +
Preference number: 5 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNGHCIH*VCSVSP
Trigger: TGGACTCACTGAGCAAACCAAGTGAATACAGTGACC...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACTCAGGTACGAAGACTTaGGCCTCCTGTCATAGTCAT +
Preference number: 5 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNSGTKT*ASCHSH
Trigger: ATGACTATGACAGGAGGCCAAAGTCTTCGTACCTGA...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGGATCGTAATCCACCTTaGGAATGCACATTGTGGGCT +
Preference number: 5 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWDRNPP*ECTLWA
Trigger: AGCCCACAATGTGCATTCCAAAGGTGGATTACGATC...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGCCGATTTTGATAAAGTaGGCCAAGTATTCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWPILIK*AKYSLG
Trigger: CCCCAGGGAATACTTGGCCAACTTTATCAAAATCGG...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTCAGTTCTCGTCTCTGTaGCTTCCGGAGGTCCATTTT +
Preference number: 5 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFQFSSL*LPEVHF
Trigger: AAAATGGACCTCCGGAAGCAACAGAGACGAGAACTG...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGATGATCACGACCTCATaGAAAAGCAGTTCTCGTCTC +
Preference number: 5 (lower is better)
Translates to: KMVTNETKRLALFSPLPLMITTS*KSSSRL
Trigger: GAGACGAGAACTGCTTTTCAATGAGGTCGTGATCAT...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTATGATCACGACCTCATaGAAAAGCAGTTCTCGTCTC +
Preference number: 5 (lower is better)
Translates to: LLSLCEPGILMVSLKHSIMITTS*KSSSRL
Trigger: GAGACGAGAACTGCTTTTCAATGAGGTCGTGATCAT...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAGCACTGAAGAAACCTaGTGTAGGTCCTTCACTCTT +
Preference number: 5 (lower is better)
Translates to: RETLWCAKEWFATRGVHGSTEET*CRSFTL
Trigger: AAGAGTGAAGGACCTACACAAGGTTTCTTCAGTGCT...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAACGCTGTCCCACCAATaGGCTGGTCTAGAATGCACA +
Preference number: 5 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRTLSHQ*AGLECT
Trigger: TGTGCATTCTAGACCAGCCAATTGGTGGGACAGCGT...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAGTGCAAAAGAATGGTTaGCTACTAGAGGCGTTCATG +
Preference number: 5 (lower is better)
Translates to: RETLWCAKEWFATRGVHGVQKNG*LLEAFM
Trigger: CATGAACGCCTCTAGTAGCAAACCATTCTTTTGCAC...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACGCACTGAGGGAAACATaGTGGTGTGCAAAAGAATGG +
Preference number: 5 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNALRET*WCAKEW
Trigger: CCATTCTTTTGCACACCACAATGTTTCCCTCAGTGC...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGGAACATTGTACCCATTaGAGAAAGGGCACTGAGGGA +
Preference number: 5 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWEHCTH*RKGTEG
Trigger: TCCCTCAGTGCCCTTTCTCAAATGGGTACAATGTTC...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGATCCTAGCACTGAAATaGCTCCCTGGGAGGGAAATT +
Preference number: 5 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWILALK*LPGREI
Trigger: AATTTCCCTCCCAGGGAGCAATTTCAGTGCTAGGAT...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTTGCTCAGGGAAGAGGTaGGAACTGCAGACACAGATT +
Preference number: 5 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFCSGKR*ELQTQI
Trigger: AATCTGTGTCTGCAGTTCCAACCTCTTCCCTGAGCA...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378423.5
CDS CCA 90 bp GTTTGCTCAGTGAGTCCAAATGTGAGTGATAATCGGCAGAAAATCTaGCAAAATCGGATTTCAAAGGCTTCACCTCAGAATAGTAGGCCT +
Preference number: 5 (lower is better)
Translates to: VCSVSPNVSDNRQKI*QNRISKASPQNSRP
Trigger: AGGCCTACTATTCTGAGGTGAAGCCTTTGAAATCCGATTTTGCCAGATTTTCTGCCGATTATCACTCACATTTGGACTCACTGAGCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 90 bp AACCAAAATCAGACAACTTTATCCGGCCATCGCTTGTCAGGAGGATaGAGTCACTTTTTATGTCCCTGTGAATCACTCCTTGGTTATGAA +
Preference number: 5 (lower is better)
Translates to: NQNQTTLSGHRLSGG*SHFLCPCESLLGYE
Trigger: TTCATAACCAAGGAGTGATTCACAGGGACATAAAAAGTGACTCCATCCTCCTGACAAGCGATGGCCGGATAAAGTTGTCTGATTTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACGGTAAACTTCTGCTCTaGTGGATCAAACCCAGTATG +
Preference number: 5 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNGKLLL*WIKPSM
Trigger: CATACTGGGTTTGATCCACAAGAGCAGAAGTTTACC...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGACGAGTCACCGAGATGTaGTCAAAATCCTCTAGCAGG +
Preference number: 5 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRRVTEM*SKSSSR
Trigger: CCTGCTAGAGGATTTTGACAACATCTCGGTGACTCG...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTCCTCTCCCTTTGTGAGCCTGGAATTCTCATGGTCTCACTGAAACATTCTATTCTGTATTCACTTGGTTaGCTCAGTGAGTCCAAATGT +
Preference number: 5 (lower is better)
Translates to: LLSLCEPGILMVSLKHSILYSLG*LSESKC
Trigger: ACATTTGGACTCACTGAGCAAACCAAGTGAATACAG...AATAGAATGTTTCAGTGAGACCATGAGAATTCCAGGCTCACAAAGGGAGAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTTCAGGTACGAAGACTTaGGCCTCCTGTCATAGTCAT +
Preference number: 5 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFSGTKT*ASCHSH
Trigger: ATGACTATGACAGGAGGCCAAAGTCTTCGTACCTGA...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTGTTGTAGGAGTGTCCTaGGGGATGGGTTTTAAATGC +
Preference number: 5 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFVVGVS*GMGFKC
Trigger: GCATTTAAAACCCATCCCCAAGGACACTCCTACAAC...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp CTATGTCGGAAACACATTATAACATGGGCACAACTGAAGTCAGATCATACCTGGGAGCCTTCCCCGATTTaGATAAAGTTGGCCAAGTAT +
Preference number: 5 (lower is better)
Translates to: LCRKHIITWAQLKSDHTWEPSPI*IKLAKY
Trigger: ATACTTGGCCAACTTTATCAAAATCGGGGAAGGCTC...CCAGGTATGATCTGACTTCAGTTGTGCCCATGTTATAATGTGTTTCCGACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp AAAATGGTGACAAATGAAACCAAACGTCTTGCCCTGTTCTCTCCTCTCCCTTTGTTTCTTCACTGCAACTaGTTTCCCTGTGTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: KMVTNETKRLALFSPLPLFLHCN*FPCVFL
Trigger: GAGAAACACACAGGGAAACAAGTTGCAGTGAAGAAA...CAAAGGGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCATTTGTCACCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGACAGTTCTCGTCTCTGTaGCTTCCGGAGGTCCATTTT +
Preference number: 5 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRQFSSL*LPEVHF
Trigger: AAAATGGACCTCCGGAAGCAACAGAGACGAGAACTG...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACATGATCACGACCTCATaGAAAAGCAGTTCTCGTCTC +
Preference number: 5 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNMITTS*KSSSRL
Trigger: GAGACGAGAACTGCTTTTCAATGAGGTCGTGATCAT...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGATCAGTGATGCCTGTATaGTCTCATGAGGGGGACGAT +
Preference number: 5 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRSVMPV*SHEGDD
Trigger: ATCGTCCCCCTCATGAGACAATACAGGCATCACTGA...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTATCCTAGCACTGAAATaGCTCCCTGGGAGGGAAATT +
Preference number: 5 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFILALK*LPGREI
Trigger: AATTTCCCTCCCAGGGAGCAATTTCAGTGCTAGGAT...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAATGAAACCAAACGTCTaGCCCTGTTCTCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRMKPNV*PCSLLS
Trigger: GGAGAGGAGAGAACAGGGCAAGACGTTTGGTTTCAT...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTGTTTCCTTGCAGGGTTaGTTTCCTCTAACGATTGTC +
Preference number: 5 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFVSLQG*FPLTIV
Trigger: GACAATCGTTAGAGGAAACAAACCCTGCAAGGAAAC...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp TCAAGAAGATCTAGACAGCAGCACGACTCTCCTATGTCGGAAACACATTATAACCTGTATTCACTTGGTTaGCTCAGTGAGTCCAAATGT +
Preference number: 5 (lower is better)
Translates to: SRRSRQQHDSPMSETHYNLYSLG*LSESKC
Trigger: ACATTTGGACTCACTGAGCAAACCAAGTGAATACAG...GTTATAATGTGTTTCCGACATAGGAGAGTCGTGCTGCTGTCTAGATCTTCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAGGTCACTGTATTCACTaGGTTTGCTCAGTGAGTCCA +
Preference number: 5 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRGHCIH*VCSVSP
Trigger: TGGACTCACTGAGCAAACCAAGTGAATACAGTGACC...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAGATCGTAATCCACCTTaGGAATGCACATTGTGGGCT +
Preference number: 5 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRDRNPP*ECTLWA
Trigger: AGCCCACAATGTGCATTCCAAAGGTGGATTACGATC...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGACTGAGTCCTTCTGATTaGCTGGATGAAGGGCTGAAA +
Preference number: 5 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRLSPSD*LDEGLK
Trigger: TTTCAGCCCTTCATCCAGCAAATCAGAAGGACTCAG...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp AGGGAAACATTGTGGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAACTGCAGACACAGATTaGGTGATAAACATTTCAGAG +
Preference number: 5 (lower is better)
Translates to: RETLWCAKEWFATRGVHGTADTD*VINISE
Trigger: CTCTGAAATGTTTATCACCAAATCTGTGTCTGCAGT...TCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACCACAATGTTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378423.5
CDS CCA 90 bp TGTCAGTCTTCTTCATTTTTCCTCAGTGTTCATTTTAGCAAGAGGTaGAAGCATTTCACCACAGTGTATTTCCAGATAGAAGCATCCAGC +
Preference number: 5 (lower is better)
Translates to: CQSSSFFLSVHFSKR*KHFTTVYFQIEASS
Trigger: GCTGGATGCTTCTATCTGGAAATACACTGTGGTGAAATGCTTCCACCTCTTGCTAAAATGAACACTGAGGAAAAATGAAGAAGACTGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378423.5
CDS-3UTR CAA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAGTTTCCTTGCAGGGTTaGTTTCCTCTAACGATTGTC +
Preference number: 5 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRVSLQG*FPLTIV
Trigger: GACAATCGTTAGAGGAAACAAACCCTGCAAGGAAAC...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAGTTGGAAATACAGCTTaGATGCTCAGGGAAGAGGTT +
Preference number: 5 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRVGNTA*MLREEV
Trigger: AACCTCTTCCCTGAGCATCAAAGCTGTATTTCCAAC...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378423.5
CDS-3UTR CAA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGATTTCTTCACTGCAACTaGTTTCCCTGTGTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRFLHCN*FPCVFL
Trigger: GAGAAACACACAGGGAAACAAGTTGCAGTGAAGAAA...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 90 bp CCACAGTGTATTTCTGATAATATTCCACGGAAAACACTAGAAACATaGTCTCAGAGGTCCAGAAGACAGTCATTAATTAGGCTTCTAAGT +
Preference number: 5 (lower is better)
Translates to: PQCISDNIPRKTLET*SQRSRRQSLIRLLS
Trigger: ACTTAGAAGCCTAATTAATGACTGTCTTCTGGACCTCTGAGACCATGTTTCTAGTGTTTTCCGTGGAATATTATCAGAAATACACTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378429.3
CDS-3UTR CAA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGAACTTTTCGCTGGTGCTaGTCAGTCTTCTTCATTTTT +
Preference number: 5 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRTFRWC*SVFFIF
Trigger: AAAAATGAAGAAGACTGACAAGCACCAGCGAAAAGT...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp GGTGTGCAAAAGAATGGTTTGCTACTAGAGGCGTTCATGGAAAATGTGATCTTTCACTGTCGAAAATGTTaGGAATCCAAAATCCACTAT +
Preference number: 5 (lower is better)
Translates to: GVQKNGLLLEAFMENVIFHCRKC*ESKIHY
Trigger: ATAGTGGATTTTGGATTCCAAACATTTTCGACAGTG...AAAGATCACATTTTCCATGAACGCCTCTAGTAGCAAACCATTCTTTTGCACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS-3UTR CAA 90 bp ACTGAAGTCAGATCATACCTGGTAAAATACCCTCTTGCTAATTCATCCTCTAGACACTGTCGAAAATGTTaGGAATCCAAAATCCACTAT +
Preference number: 5 (lower is better)
Translates to: TEVRSYLVKYPLANSSSRHCRKC*ESKIHY
Trigger: ATAGTGGATTTTGGATTCCAAACATTTTCGACAGTG...TCTAGAGGATGAATTAGCAAGAGGGTATTTTACCAGGTATGATCTGACTTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS GCA 72 bp TCGCCCCTCGGAGGACTGTCCATGAGCGTACGCAGCTaGTCCGGGTTTTCGTGGCAGCCGGCGGGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: SPLGGLSMSVRS*SGFSWQPAGGR
Trigger: CCTGCCTCCCGCCGGCTGCCACGAAAACCCGGAGCAGCTGCGTACGCTCATGGACAGTCCTCCGAGGGGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353224.10
CDS TCA 72 bp CCAGCTGCCCGGCTTCGCCCCTCGGAGGACTGTCCATaGGCGTACGCAGCTGCTCCGGGTTTTCGTGGCAGC +
Preference number: 6 (lower is better)
Translates to: PAARLRPSEDCP*AYAAAPGFRGS
Trigger: GCTGCCACGAAAACCCGGAGCAGCTGCGTACGCTCATGGACAGTCCTCCGAGGGGCGAAGCCGGGCAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353224.10
CDS GCA 72 bp GTCAGCGAAGCGGCGGTGCCTCAGCCCCTTCTCAGCTaGTACAGCGCTCCCAGCGCCATGTTCCCGGTCTCC +
Preference number: 6 (lower is better)
Translates to: VSEAAVPQPLLS*YSAPSAMFPVS
Trigger: GGAGACCGGGAACATGGCGCTGGGAGCGCTGTAGCAGCTGAGAAGGGGCTGAGGCACCGCCGCTTCGCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353224.10
ENST00000378429.3
CDS GCA 72 bp TGTATTTCTGGTGGCCGGCTGTCAGCGAAGCGGCGGTaGCTCAGCCCCTTCTCAGCTGCTACAGCGCTCCCA +
Preference number: 6 (lower is better)
Translates to: CISGGRLSAKRR*LSPFSAATALP
Trigger: TGGGAGCGCTGTAGCAGCTGAGAAGGGGCTGAGGCACCGCCGCTTCGCTGACAGCCGGCCACCAGAAATACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353224.10
CDS CCA 72 bp GGCCTGGACCGTGGCTGGAGGCTCCCTGATCTGGGGTaGGTGGGCTTTCTTTCCTTAGGGAGTTGGAGCGAG +
Preference number: 6 (lower is better)
Translates to: GLDRGWRLPDLG*VGFLSLGSWSE
Trigger: CTCGCTCCAACTCCCTAAGGAAAGAAAGCCCACCCACCCCAGATCAGGGAGCCTCCAGCCACGGTCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS TCA 72 bp TCCAAATGGCATCATCGGTTCCTGGAGTCCCGAGCCTaGCCTGGACCTCTGCCGCATGGTGGGCTGAGGGCT +
Preference number: 6 (lower is better)
Translates to: SKWHHRFLESRA*PGPLPHGGLRA
Trigger: AGCCCTCAGCCCACCATGCGGCAGAGGTCCAGGTCAGGCTCGGGACTCCAGGAACCGATGATGCCATTTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 72 bp GGAGAAGGTGATGAAGCCATTTTCTTCCGCGTGGCCTaGACCGTGGCTGGAGGCTCCCTGATCTGGGGTGGG +
Preference number: 6 (lower is better)
Translates to: GEGDEAIFFRVA*TVAGGSLIWGG
Trigger: CCCACCCCAGATCAGGGAGCCTCCAGCCACGGTCCAGGCCACGCGGAAGAAAATGGCTTCATCACCTTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 72 bp CCTGGAGTCCCGAGCCTGACCTGGACCTCTGCCGCATaGTGGGCTGAGGGCTTGTCTGATTCAGGTACGAAG +
Preference number: 6 (lower is better)
Translates to: PGVPSLTWTSAA*WAEGLSDSGTK
Trigger: CTTCGTACCTGAATCAGACAAGCCCTCAGCCCACCATGCGGCAGAGGTCCAGGTCAGGCTCGGGACTCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 72 bp GGAGTCCCGAGCCTGACCTGGACCTCTGCCGCATGGTaGGCTGAGGGCTTGTCTGATTCAGGTACGAAGACT +
Preference number: 6 (lower is better)
Translates to: GVPSLTWTSAAW*AEGLSDSGTKT
Trigger: AGTCTTCGTACCTGAATCAGACAAGCCCTCAGCCCACCATGCGGCAGAGGTCCAGGTCAGGCTCGGGACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 72 bp GCGAACTGCTCTGCAGGGAGGGGTGATGGTACAAGGTaGCTTTGTGGTACCCAGACGGGTACTGGTGACTGC +
Preference number: 6 (lower is better)
Translates to: ANCSAGRGDGTR*LCGTQTGTGDC
Trigger: GCAGTCACCAGTACCCGTCTGGGTACCACAAAGCCACCTTGTACCATCACCCCTCCCTGCAGAGCAGTTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CAA 90 bp TGGATGGGTGTGATGCATGAAGGGTCCACCATAGGCTTTGGCCTGTaGGCCGTATCTGCTAACAGGCTGTGCCACTGCTGGGGAAGGCCG +
Preference number: 6 (lower is better)
Translates to: WMGVMHEGSTIGFGL*AVSANRLCHCWGRP
Trigger: CGGCCTTCCCCAGCAGTGGCACAGCCTGTTAGCAGATACGGCCAACAGGCCAAAGCCTATGGTGGACCCTTCATGCATCACACCCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CAA 90 bp TCCAGGCTGGGTCCCCATTCACTTTCACTGTACGCCAGGCTCTCCTaGGAGCACCCGCTGGTCCCTGCAGTTCTAGAAGGTGTGAATTGG +
Preference number: 6 (lower is better)
Translates to: SRLGPHSLSLYARLS*EHPLVPAVLEGVNW
Trigger: CCAATTCACACCTTCTAGAACTGCAGGGACCAGCGGGTGCTCCAAGGAGAGCCTGGCGTACAGTGAAAGTGAATGGGGACCCAGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CAA 90 bp GTCCCGAGCCTGACCTGGACCTCTGCCGCATGGTGGGCTGAGGGCTaGTCTGATTCAGGTACGAAGACTTTGGCCTCCTGTCATAGTCAT +
Preference number: 6 (lower is better)
Translates to: VPSLTWTSAAWWAEG*SDSGTKTLASCHSH
Trigger: ATGACTATGACAGGAGGCCAAAGTCTTCGTACCTGAATCAGACAAGCCCTCAGCCCACCATGCGGCAGAGGTCCAGGTCAGGCTCGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS TCA 72 bp CCCTGGGGTAGGTGTCAGACCCTGACAGTGGAGGGCTaGGGACCATCTGTGCTCGATCGTAATCCACCTTTG +
Preference number: 6 (lower is better)
Translates to: PWGRCQTLTVEG*GPSVLDRNPPL
Trigger: CAAAGGTGGATTACGATCGAGCACAGATGGTCCTCAGCCCTCCACTGTCAGGGTCTGACACCTACCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CAA 72 bp GGTCCCCATTCACTTTCACTGTACGCCAGGCTCTCCTaGGAGCACCCGCTGGTCCCTGCAGTTCTAGAAGGT +
Preference number: 6 (lower is better)
Translates to: GPHSLSLYARLS*EHPLVPAVLEG
Trigger: ACCTTCTAGAACTGCAGGGACCAGCGGGTGCTCCAAGGAGAGCCTGGCGTACAGTGAAAGTGAATGGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CAA 72 bp CTGACCTGGACCTCTGCCGCATGGTGGGCTGAGGGCTaGTCTGATTCAGGTACGAAGACTTTGGCCTCCTGT +
Preference number: 6 (lower is better)
Translates to: LTWTSAAWWAEG*SDSGTKTLASC
Trigger: ACAGGAGGCCAAAGTCTTCGTACCTGAATCAGACAAGCCCTCAGCCCACCATGCGGCAGAGGTCCAGGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS GCA 72 bp AGCTCAGGTAGGAAGCCGTGGAGATGTACTGCGAACTaGTCTGCAGGGAGGGGTGATGGTACAAGGTGGCTT +
Preference number: 6 (lower is better)
Translates to: SSGRKPWRCTAN*SAGRGDGTRWL
Trigger: AAGCCACCTTGTACCATCACCCCTCCCTGCAGAGCAGTTCGCAGTACATCTCCACGGCTTCCTACCTGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 72 bp GGGCTGAGGGCTTGTCTGATTCAGGTACGAAGACTTTaGCCTCCTGTCATAGTCATCCAGGCTGGGTCCCCA +
Preference number: 6 (lower is better)
Translates to: GLRACLIQVRRL*PPVIVIQAGSP
Trigger: TGGGGACCCAGCCTGGATGACTATGACAGGAGGCCAAAGTCTTCGTACCTGAATCAGACAAGCCCTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CAA 72 bp GTGATGCATGAAGGGTCCACCATAGGCTTTGGCCTGTaGGCCGTATCTGCTAACAGGCTGTGCCACTGCTGG +
Preference number: 6 (lower is better)
Translates to: VMHEGSTIGFGL*AVSANRLCHCW
Trigger: CCAGCAGTGGCACAGCCTGTTAGCAGATACGGCCAACAGGCCAAAGCCTATGGTGGACCCTTCATGCATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CAA 72 bp TGGGCTGAGGGCTTGTCTGATTCAGGTACGAAGACTTaGGCCTCCTGTCATAGTCATCCAGGCTGGGTCCCC +
Preference number: 6 (lower is better)
Translates to: WAEGLSDSGTKT*ASCHSHPGWVP
Trigger: GGGGACCCAGCCTGGATGACTATGACAGGAGGCCAAAGTCTTCGTACCTGAATCAGACAAGCCCTCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS TCA 72 bp TGTCTTCATAGGAGCCAGCTGGATGGGTGTGATGCATaGAGGGTCCACCATAGGCTTTGGCCTGTTGGCCGT +
Preference number: 6 (lower is better)
Translates to: CLHRSQLDGCDA*RVHHRLWPVGR
Trigger: ACGGCCAACAGGCCAAAGCCTATGGTGGACCCTTCATGCATCACACCCATCCAGCTGGCTCCTATGAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 72 bp TTAAATGCACTTGCTCCAAATGGCATCATCGGTTCCTaGAGTCCCGAGCCTGACCTGGACCTCTGCCGCATG +
Preference number: 6 (lower is better)
Translates to: LNALAPNGIIGS*SPEPDLDLCRM
Trigger: CATGCGGCAGAGGTCCAGGTCAGGCTCGGGACTCCAGGAACCGATGATGCCATTTGGAGCAAGTGCATTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS GCA 72 bp ACGGGTACTGGTGACTGCTTGAGGAATAGCCCGATTTaGTTTGACTTTGAGGTAGTTTGGCAGGGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: TGTGDCLRNSPI*FDFEVVWQGPW
Trigger: CCAGGGGCCCTGCCAAACTACCTCAAAGTCAAAGCAAATCGGGCTATTCCTCAAGCAGTCACCAGTACCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 72 bp ACGAAGACTTTGGCCTCCTGTCATAGTCATCCAGGCTaGGTCCCCATTCACTTTCACTGTACGCCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: TKTLASCHSHPG*VPIHFHCTPGS
Trigger: AGAGCCTGGCGTACAGTGAAAGTGAATGGGGACCCAGCCTGGATGACTATGACAGGAGGCCAAAGTCTTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 72 bp AGGAATAGCCCGATTTGCTTTGACTTTGAGGTAGTTTaGCAGGGCCCCTGGGGTAGGTGTCAGACCCTGACA +
Preference number: 6 (lower is better)
Translates to: RNSPICFDFEVV*QGPWGRCQTLT
Trigger: TGTCAGGGTCTGACACCTACCCCAGGGGCCCTGCCAAACTACCTCAAAGTCAAAGCAAATCGGGCTATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 72 bp TCTTCACTGCAACTTGTTTCCCTGTGTGTTTCTCGGTaGCGATGCATACGATGCCGGTTGAGCCTTCCCCGA +
Preference number: 6 (lower is better)
Translates to: SSLQLVSLCVSR*RCIRCRLSLPR
Trigger: TCGGGGAAGGCTCAACCGGCATCGTATGCATCGCCACCGAGAAACACACAGGGAAACAAGTTGCAGTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CAA 90 bp GGGCTCGGACAAGCGAGGGTAGGTGTAGGAGTTGTAGGAGTGTCCTaGGGGATGGGTTTTAAATGCACTTGCTCCAAATGGCATCATCGG +
Preference number: 6 (lower is better)
Translates to: GLGQARVGVGVVGVS*GMGFKCTCSKWHHR
Trigger: CCGATGATGCCATTTGGAGCAAGTGCATTTAAAACCCATCCCCAAGGACACTCCTACAACTCCTACACCTACCCTCGCTTGTCCGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 72 bp GTGCTCGATCGTAATCCACCTTTGGAATGCACATTGTaGGCTCGGACAAGCGAGGGTAGGTGTAGGAGTTGT +
Preference number: 6 (lower is better)
Translates to: VLDRNPPLECTL*ARTSEGRCRSC
Trigger: ACAACTCCTACACCTACCCTCGCTTGTCCGAGCCCACAATGTGCATTCCAAAGGTGGATTACGATCGAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CAA 72 bp TCTGTGCTCGATCGTAATCCACCTTTGGAATGCACATaGTGGGCTCGGACAAGCGAGGGTAGGTGTAGGAGT +
Preference number: 6 (lower is better)
Translates to: SVLDRNPPLECT*WARTSEGRCRS
Trigger: ACTCCTACACCTACCCTCGCTTGTCCGAGCCCACAATGTGCATTCCAAAGGTGGATTACGATCGAGCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CAA 72 bp GCGATGCATACGATGCCGGTTGAGCCTTCCCCGATTTaGATAAAGTTGGCCAAGTATTCCCTGGGGTCTCCT +
Preference number: 6 (lower is better)
Translates to: AMHTMPVEPSPI*IKLAKYSLGSP
Trigger: AGGAGACCCCAGGGAATACTTGGCCAACTTTATCAAAATCGGGGAAGGCTCAACCGGCATCGTATGCATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CAA 90 bp GGTACAAGGTGGCTTTGTGGTACCCAGACGGGTACTGGTGACTGCTaGAGGAATAGCCCGATTTGCTTTGACTTTGAGGTAGTTTGGCAG +
Preference number: 6 (lower is better)
Translates to: GTRWLCGTQTGTGDC*RNSPICFDFEVVWQ
Trigger: CTGCCAAACTACCTCAAAGTCAAAGCAAATCGGGCTATTCCTCAAGCAGTCACCAGTACCCGTCTGGGTACCACAAAGCCACCTTGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS GCA 72 bp AGGTGGCTTTGTGGTACCCAGACGGGTACTGGTGACTaGTTGAGGAATAGCCCGATTTGCTTTGACTTTGAG +
Preference number: 6 (lower is better)
Translates to: RWLCGTQTGTGD*LRNSPICFDFE
Trigger: CTCAAAGTCAAAGCAAATCGGGCTATTCCTCAAGCAGTCACCAGTACCCGTCTGGGTACCACAAAGCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS GCA 72 bp TGTCCTCATCTAGCTTTGCCACCTACACGAATCCTCTaGTCAGTGATGCCTGTATTGTCTCATGAGGGGGAC +
Preference number: 6 (lower is better)
Translates to: CPHLALPPTRIL*SVMPVLSHEGD
Trigger: GTCCCCCTCATGAGACAATACAGGCATCACTGAGCAGAGGATTCGTGTAGGTGGCAAAGCTAGATGAGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 72 bp GATCTGGGGTGGGTGGGCTTTCTTTCCTTAGGGAGTTaGAGCGAGTCACCGAGATGTTGTCAAAATCCTCTA +
Preference number: 6 (lower is better)
Translates to: DLGWVGFLSLGS*SESPRCCQNPL
Trigger: TAGAGGATTTTGACAACATCTCGGTGACTCGCTCCAACTCCCTAAGGAAAGAAAGCCCACCCACCCCAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS GCA 72 bp TCGTCTCTGTTGCTTCCGGAGGTCCATTTTCTTCACTaGAACTTGTTTCCCTGTGTGTTTCTCGGTGGCGAT +
Preference number: 6 (lower is better)
Translates to: SSLLLPEVHFLH*NLFPCVFLGGD
Trigger: ATCGCCACCGAGAAACACACAGGGAAACAAGTTGCAGTGAAGAAAATGGACCTCCGGAAGCAACAGAGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 72 bp TTGTTTCCTCTAACGATTGTCTTCATAGGAGCCAGCTaGATGGGTGTGATGCATGAAGGGTCCACCATAGGC +
Preference number: 6 (lower is better)
Translates to: LFPLTIVFIGAS*MGVMHEGSTIG
Trigger: GCCTATGGTGGACCCTTCATGCATCACACCCATCCAGCTGGCTCCTATGAAGACAATCGTTAGAGGAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CAA 72 bp TCTAGCAGGCCGTTGATGGAGGTTTCCTTGCAGGGTTaGTTTCCTCTAACGATTGTCTTCATAGGAGCCAGC +
Preference number: 6 (lower is better)
Translates to: SSRPLMEVSLQG*FPLTIVFIGAS
Trigger: GCTGGCTCCTATGAAGACAATCGTTAGAGGAAACAAACCCTGCAAGGAAACCTCCATCAACGGCCTGCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CAA 72 bp TGGCTTTGTGGTACCCAGACGGGTACTGGTGACTGCTaGAGGAATAGCCCGATTTGCTTTGACTTTGAGGTA +
Preference number: 6 (lower is better)
Translates to: WLCGTQTGTGDC*RNSPICFDFEV
Trigger: TACCTCAAAGTCAAAGCAAATCGGGCTATTCCTCAAGCAGTCACCAGTACCCGTCTGGGTACCACAAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CAA 90 bp TTGGAGCGAGTCACCGAGATGTTGTCAAAATCCTCTAGCAGGCCGTaGATGGAGGTTTCCTTGCAGGGTTTGTTTCCTCTAACGATTGTC +
Preference number: 6 (lower is better)
Translates to: LERVTEMLSKSSSRP*MEVSLQGLFPLTIV
Trigger: GACAATCGTTAGAGGAAACAAACCCTGCAAGGAAACCTCCATCAACGGCCTGCTAGAGGATTTTGACAACATCTCGGTGACTCGCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CAA 90 bp AGAATAGTAGGCCTCCCCGTGCTTCATTTTCATTACGTGCCCATTTaGCTTGGCTGCGTGGCTGCCTCTATAATACGGATCCAGATCATC +
Preference number: 6 (lower is better)
Translates to: RIVGLPVLHFHYVPI*LGCVAASIIRIQII
Trigger: GATGATCTGGATCCGTATTATAGAGGCAGCCACGCAGCCAAGCAAAATGGGCACGTAATGAAAATGAAGCACGGGGAGGCCTACTATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CAA 72 bp ATGCTCAGGGAAGAGGTTGGAACTGCAGACACAGATTaGGTGATAAACATTTCAGAGGCCCCAGTAAGAGCC +
Preference number: 6 (lower is better)
Translates to: MLREEVGTADTD*VINISEAPVRA
Trigger: GGCTCTTACTGGGGCCTCTGAAATGTTTATCACCAAATCTGTGTCTGCAGTTCCAACCTCTTCCCTGAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378423.5
CDS CAA 90 bp GAGATGTTGTCAAAATCCTCTAGCAGGCCGTTGATGGAGGTTTCCTaGCAGGGTTTGTTTCCTCTAACGATTGTCTTCATAGGAGCCAGC +
Preference number: 6 (lower is better)
Translates to: EMLSKSSSRPLMEVS*QGLFPLTIVFIGAS
Trigger: GCTGGCTCCTATGAAGACAATCGTTAGAGGAAACAAACCCTGCAAGGAAACCTCCATCAACGGCCTGCTAGAGGATTTTGACAACATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CAA 90 bp ATCCCGCATGATCACGACCTCATTGAAAAGCAGTTCTCGTCTCTGTaGCTTCCGGAGGTCCATTTTCTTCACTGCAACTTGTTTCCCTGT +
Preference number: 6 (lower is better)
Translates to: IPHDHDLIEKQFSSL*LPEVHFLHCNLFPC
Trigger: ACAGGGAAACAAGTTGCAGTGAAGAAAATGGACCTCCGGAAGCAACAGAGACGAGAACTGCTTTTCAATGAGGTCGTGATCATGCGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 72 bp CAGACAACTTTATCCGGCCATCGCTTGTCAGGAGGATaGAGTCACTTTTTATGTCCCTGTGAATCACTCCTT +
Preference number: 6 (lower is better)
Translates to: QTTLSGHRLSGG*SHFLCPCESLL
Trigger: AAGGAGTGATTCACAGGGACATAAAAAGTGACTCCATCCTCCTGACAAGCGATGGCCGGATAAAGTTGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CAA 72 bp GATCACGACCTCATTGAAAAGCAGTTCTCGTCTCTGTaGCTTCCGGAGGTCCATTTTCTTCACTGCAACTTG +
Preference number: 6 (lower is better)
Translates to: DHDLIEKQFSSL*LPEVHFLHCNL
Trigger: CAAGTTGCAGTGAAGAAAATGGACCTCCGGAAGCAACAGAGACGAGAACTGCTTTTCAATGAGGTCGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS GCA 72 bp TTTTCATTACGTGCCCATTTTGCTTGGCTGCGTGGCTaGCTCTATAATACGGATCCAGATCATCTCCATAGA +
Preference number: 6 (lower is better)
Translates to: FSLRAHFAWLRG*LYNTDPDHLHR
Trigger: TCTATGGAGATGATCTGGATCCGTATTATAGAGGCAGCCACGCAGCCAAGCAAAATGGGCACGTAATGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CAA 72 bp TGTTCTCCTGAATTATTCTCATGTCCTCATCTAGCTTaGCCACCTACACGAATCCTCTGCTCAGTGATGCCT +
Preference number: 6 (lower is better)
Translates to: CSPELFSCPHLA*PPTRILCSVMP
Trigger: AGGCATCACTGAGCAGAGGATTCGTGTAGGTGGCAAAGCTAGATGAGGACATGAGAATAATTCAGGAGAACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 72 bp ACAGTGTATTTCCAGATAGAAGCATCCAGCGAAAGTTaGAAATACAGCTTTGATGCTCAGGGAAGAGGTTGG +
Preference number: 6 (lower is better)
Translates to: TVYFQIEASSES*KYSFDAQGRGW
Trigger: CCAACCTCTTCCCTGAGCATCAAAGCTGTATTTCCAACTTTCGCTGGATGCTTCTATCTGGAAATACACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378423.5
CDS CAA 90 bp GTTTCCTTTTGTTCTCCTGAATTATTCTCATGTCCTCATCTAGCTTaGCCACCTACACGAATCCTCTGCTCAGTGATGCCTGTATTGTCT +
Preference number: 6 (lower is better)
Translates to: VSFCSPELFSCPHLA*PPTRILCSVMPVLS
Trigger: AGACAATACAGGCATCACTGAGCAGAGGATTCGTGTAGGTGGCAAAGCTAGATGAGGACATGAGAATAATTCAGGAGAACAAAAGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS GCA 72 bp ATTAAAGACTCCAGAGGAGTGTGGCTATTTCTATTCTaGAACTTTTCGCTGGTGCTTGTCAGTCTTCTTCAT +
Preference number: 6 (lower is better)
Translates to: IKDSRGVWLFLF*NFSLVLVSLLH
Trigger: ATGAAGAAGACTGACAAGCACCAGCGAAAAGTTGCAGAATAGAAATAGCCACACTCCTCTGGAGTCTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CCA 72 bp AGTTGGAAATACAGCTTTGATGCTCAGGGAAGAGGTTaGAACTGCAGACACAGATTTGGTGATAAACATTTC +
Preference number: 6 (lower is better)
Translates to: SWKYSFDAQGRG*NCRHRFGDKHF
Trigger: GAAATGTTTATCACCAAATCTGTGTCTGCAGTTCCAACCTCTTCCCTGAGCATCAAAGCTGTATTTCCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378423.5
CDS TCA 72 bp AACATGATGCCAAAACCTTTATATGATGGCTGTGGATaGATTAAAGACTCCAGAGGAGTGTGGCTATTTCTA +
Preference number: 6 (lower is better)
Translates to: NMMPKPLYDGCG*IKDSRGVWLFL
Trigger: TAGAAATAGCCACACTCCTCTGGAGTCTTTAATTCATCCACAGCCATCATATAAAGGTTTTGGCATCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3
CDS CAA 72 bp TGTGGCTATTTCTATTCTGCAACTTTTCGCTGGTGCTaGTCAGTCTTCTTCATTTTTCCTCAGTGTTCATTT +
Preference number: 6 (lower is better)
Translates to: CGYFYSATFRWC*SVFFIFPQCSF
Trigger: AAATGAACACTGAGGAAAAATGAAGAAGACTGACAAGCACCAGCGAAAAGTTGCAGAATAGAAATAGCCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353224.10
ENST00000378423.5
ENST00000378429.3