RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PAK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000077264

Ensembl transcript IDs: ENST00000262836.6, ENST00000360648.8, ENST00000372007.10, ENST00000372010.5, ENST00000417227.5, ENST00000425146.5, ENST00000429193.5, ENST00000446737.5, ENST00000484442.5, ENST00000487802.1, ENST00000518291.5, ENST00000519681.5

Found 823 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATaGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCT +
Preference number: 1 (lower is better)
Translates to: IHYWLFRFTVEVTTL*SLQHCCPVWAAIQA
Trigger: AGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR TCA 90 bp AAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTaGCCACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTG +
Preference number: 1 (lower is better)
Translates to: KMRGFTTGSFASRWK*PLYGHFNIAALFGL
Trigger: CAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR GCA 90 bp AAATATCTCTGCCCTGCATGCTCTGCGCTCTGGCCAGAAGGCATCTaGTTCTGGCATCTTTTCTATGTGTCTATAGTTCCCTTTCTGCTG +
Preference number: 1 (lower is better)
Translates to: KYLCPACSALWPEGI*FWHLFYVSIVPFLL
Trigger: CAGCAGAAAGGGAACTATAGACACATAGAAAAGATGCCAGAAGCAGATGCCTTCTGGCCAGAGCGCAGAGCATGCAGGGCAGAGATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CCA 90 bp CTCTGCCCTGCATGCTCTGCGCTCTGGCCAGAAGGCATCTGCTTCTaGCATCTTTTCTATGTGTCTATAGTTCCCTTTCTGCTGTTTATT +
Preference number: 1 (lower is better)
Translates to: LCPACSALWPEGICF*HLFYVSIVPFLLFI
Trigger: AATAAACAGCAGAAAGGGAACTATAGACACATAGAAAAGATGCCAGAAGCAGATGCCTTCTGGCCAGAGCGCAGAGCATGCAGGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR TCA 90 bp ACATGTTGCCAGGCTTACTGCTGGTATTATGGGATAGCATTTGCCTaGTGGCAGCTTCTAAAGGAGACTCCGATGGCACTAAGCAGTTTC +
Preference number: 1 (lower is better)
Translates to: TCCQAYCWYYGIAFA*WQLLKETPMALSSF
Trigger: GAAACTGCTTAGTGCCATCGGAGTCTCCTTTAGAAGCTGCCATCAGGCAAATGCTATCCCATAATACCAGCAGTAAGCCTGGCAACATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR GCA 90 bp TTGAACATGTTGCCAGGCTTACTGCTGGTATTATGGGATAGCATTTaGCTGATGGCAGCTTCTAAAGGAGACTCCGATGGCACTAAGCAG +
Preference number: 1 (lower is better)
Translates to: LNMLPGLLLVLWDSI*LMAASKGDSDGTKQ
Trigger: CTGCTTAGTGCCATCGGAGTCTCCTTTAGAAGCTGCCATCAGGCAAATGCTATCCCATAATACCAGCAGTAAGCCTGGCAACATGTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR GCA 90 bp ATAGATAATAGTCTCCTAAGAAAGCGTGTGCCATACCCGAGCGTGTaGCAACCTCAGCACCCAGGCAAGCATAAAGCCTATGGAATAATT +
Preference number: 1 (lower is better)
Translates to: IDNSLLRKRVPYPSV*QPQHPGKHKAYGII
Trigger: AATTATTCCATAGGCTTTATGCTTGCCTGGGTGCTGAGGTTGGCACACGCTCGGGTATGGCACACGCTTTCTTAGGAGACTATTATCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CCA 90 bp CAATGGAATGTGCTTCACCGGGGAGGGATAGATGTAAGGATCAGGTaGTTAAACTCAAACATTGGGGTGCAGTTCACAAGCCTGAAAGAA +
Preference number: 1 (lower is better)
Translates to: QWNVLHRGGIDVRIR*LNSNIGVQFTSLKE
Trigger: TTCTTTCAGGCTTGTGAACTGCACCCCAATGTTTGAGTTTAACCACCTGATCCTTACATCTATCCCTCCCCGGTGAAGCACATTCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR TCA 90 bp AGGTATTGGGCTCTCTCCACTGGCAGGACACAGTCACTAATGTACTaGTTTTTATTTGCATCCCAGGATTTCATTGAATTTCCCGGCACT +
Preference number: 1 (lower is better)
Translates to: RYWALSTGRTQSLMY*FLFASQDFIEFPGT
Trigger: AGTGCCGGGAAATTCAATGAAATCCTGGGATGCAAATAAAAATCAGTACATTAGTGACTGTGTCCTGCCAGTGGAGAGAGCCCAATACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CCA 90 bp GTACTAAATCTGTTGAACATGTTGCCAGGCTTACTGCTGGTATTATaGGATAGCATTTGCCTGATGGCAGCTTCTAAAGGAGACTCCGAT +
Preference number: 1 (lower is better)
Translates to: VLNLLNMLPGLLLVL*DSICLMAASKGDSD
Trigger: ATCGGAGTCTCCTTTAGAAGCTGCCATCAGGCAAATGCTATCCCATAATACCAGCAGTAAGCCTGGCAACATGTTCAACAGATTTAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CCA 90 bp AACTCCCAGTTTACCCTCTTTCCAGCAGTGTACTCATCATACAACTaGCCAATCACTGTGGGAGTTGTCATCAGAAATGCTATCTTTGGT +
Preference number: 1 (lower is better)
Translates to: NSQFTLFPAVYSSYN*PITVGVVIRNAIFG
Trigger: ACCAAAGATAGCATTTCTGATGACAACTCCCACAGTGATTGGCCAGTTGTATGATGAGTACACTGCTGGAAAGAGGGTAAACTGGGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR TCA 90 bp ACACACGAGATCAGCAAGAACGAAGTCATTACCCAACATGGTGACTaGTTTGAGGGGATTGTGTCATCTGAAAATCCTCATGGGATTATG +
Preference number: 1 (lower is better)
Translates to: THEISKNEVITQHGD*FEGIVSSENPHGIM
Trigger: CATAATCCCATGAGGATTTTCAGATGACACAATCCCCTCAAATCAGTCACCATGTTGGGTAATGACTTCGTTCTTGCTGATCTCGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR TCA 90 bp TTTCCTTCCCAGTCCACATGCAAATACACGTTCAGAATTGTGTGCTaGGTTCACTTCAAATCCCAGGCCCATCAAACTGTCAGTTTACAA +
Preference number: 1 (lower is better)
Translates to: FPSQSTCKYTFRIVC*VHFKSQAHQTVSLQ
Trigger: TTGTAAACTGACAGTTTGATGGGCCTGGGATTTGAAGTGAACTCAGCACACAATTCTGAACGTGTATTTGCATGTGGACTGGGAAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CCA 90 bp CCGGGGAGGGATAGATGTAAGGATCAGGTGGTTAAACTCAAACATTaGGGTGCAGTTCACAAGCCTGAAAGAAATCTGAATAACATAAAG +
Preference number: 1 (lower is better)
Translates to: PGRDRCKDQVVKLKH*GAVHKPERNLNNIK
Trigger: CTTTATGTTATTCAGATTTCTTTCAGGCTTGTGAACTGCACCCCAATGTTTGAGTTTAACCACCTGATCCTTACATCTATCCCTCCCCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CCA 90 bp CCACTACATCTGACTCATTCTCTACTATCGCTGTTGATTTCCTCTTaGGTACTAAATCTGTTGAACATGTTGCCAGGCTTACTGCTGGTA +
Preference number: 1 (lower is better)
Translates to: PLHLTHSLLSLLISS*VLNLLNMLPGLLLV
Trigger: TACCAGCAGTAAGCCTGGCAACATGTTCAACAGATTTAGTACCCAAGAGGAAATCAACAGCGATAGTAGAGAATGAGTCAGATGTAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CCA 90 bp CCCTCTTTCCAGCAGTGTACTCATCATACAACTGGCCAATCACTGTaGGAGTTGTCATCAGAAATGCTATCTTTGGTTCCCAACAAATTA +
Preference number: 1 (lower is better)
Translates to: PSFQQCTHHTTGQSL*ELSSEMLSLVPNKL
Trigger: TAATTTGTTGGGAACCAAAGATAGCATTTCTGATGACAACTCCCACAGTGATTGGCCAGTTGTATGATGAGTACACTGCTGGAAAGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR TCA 90 bp ACTGATTTGAGGGGATTGTGTCATCTGAAAATCCTCATGGGATTATaGCAACGCACTGGATCCTTGCTAACAACATTAACGTTCTTTCCT +
Preference number: 1 (lower is better)
Translates to: TDLRGLCHLKILMGL*QRTGSLLTTLTFFP
Trigger: AGGAAAGAACGTTAATGTTGTTAGCAAGGATCCAGTGCGTTGTCATAATCCCATGAGGATTTTCAGATGACACAATCCCCTCAAATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CCA 90 bp AGATGTTATGAGTATAATCCCAGTAGACATCACTACCCTGTGATCTaGCTCCTCCTGGCTGATGTACTGAGATTAAAAACTCAATGCATT +
Preference number: 1 (lower is better)
Translates to: RCYEYNPSRHHYPVI*LLLADVLRLKTQCI
Trigger: AATGCATTGAGTTTTTAATCTCAGTACATCAGCCAGGAGGAGCCAGATCACAGGGTAGTGATGTCTACTGGGATTATACTCATAACATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR TCA 90 bp GTGGGACTTGCCCTATTGGTTATTAAAAGAAGAATCCTACCTGAATaGTATACAGTAATATCCTGTTGGACAAGAAAATGGTGGGAGCTG +
Preference number: 1 (lower is better)
Translates to: VGLALLVIKRRILPE*YTVISCWTRKWWEL
Trigger: CAGCTCCCACCATTTTCTTGTCCAACAGGATATTACTGTATATCATTCAGGTAGGATTCTTCTTTTAATAACCAATAGGGCAAGTCCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CCA 90 bp ATTCTAGCAAGTGTGACAGTGTGTTTCTGTTGTAGTGGCAAATACTaGCCACAGCTTAATGAAAACCAGACTTTACATACAGACTGTATG +
Preference number: 1 (lower is better)
Translates to: ILASVTVCFCCSGKY*PQLNENQTLHTDCM
Trigger: CATACAGTCTGTATGTAAAGTCTGGTTTTCATTAAGCTGTGGCCAGTATTTGCCACTACAACAGAAACACACTGTCACACTTGCTAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR GCA 90 bp CCAAAAGTTTATCTTGCAAGTTCAACCCAATTAAGTGGCAGTAAATaGTACAAGTTGTATAGAATACTCGTACACACAGGTGTGCACATG +
Preference number: 1 (lower is better)
Translates to: PKVYLASSTQLSGSK*YKLYRILVHTGVHM
Trigger: CATGTGCACACCTGTGTGTACGAGTATTCTATACAACTTGTAGCATTTACTGCCACTTAATTGGGTTGAACTTGCAAGATAAACTTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CCA 90 bp ATACATAGGAAAAATGGGAAGAGGTACTTAGAGCCAAATATTGATTaGGATGTAGCCTTCACTGACCTCCCATTTCTTACAGAGTTGAAT +
Preference number: 1 (lower is better)
Translates to: IHRKNGKRYLEPNID*DVAFTDLPFLTELN
Trigger: ATTCAACTCTGTAAGAAATGGGAGGTCAGTGAAGGCTACATCCCAATCAATATTTGGCTCTAAGTACCTCTTCCCATTTTTCCTATGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CAA 90 bp AATTTTGCACTCAGGGCTGGTTGGCACTCTGCTGTAGGCAGGGCATaGGGACCATCCACTAACTCCCAGTTTACCCTCTTTCCAGCAGTG +
Preference number: 2 (lower is better)
Translates to: NFALRAGWHSAVGRA*GPSTNSQFTLFPAV
Trigger: CACTGCTGGAAAGAGGGTAAACTGGGAGTTAGTGGATGGTCCCAATGCCCTGCCTACAGCAGAGTGCCAACCAGCCCTGAGTGCAAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR GCA 90 bp GCAGGGCATTGGGACCATCCACTAACTCCCAGTTTACCCTCTTTCCAGCAGTGTACTAGCAAATATCTCTaGCCTGCATGCTCTGCGCTC +
Preference number: 2 (lower is better)
Translates to: AGHWDHPLTPSLPSFQQCTSKYL*PACSAL
Trigger: GAGCGCAGAGCATGCAGGGCAGAGATATTTGCTAGT...ACACTGCTGGAAAGAGGGTAAACTGGGAGTTAGTGGATGGTCCCAATGCCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CAA 90 bp TTGCGGGTCCATAAAGCACACCACACACAAGCACACACATTGAACTaGAATTTTGCACTCAGGGCTGGTTGGCACTCTGCTGTAGGCAGG +
Preference number: 2 (lower is better)
Translates to: LRVHKAHHTQAHTLN*NFALRAGWHSAVGR
Trigger: CCTGCCTACAGCAGAGTGCCAACCAGCCCTGAGTGCAAAATTCAAGTTCAATGTGTGTGCTTGTGTGTGGTGTGCTTTATGGACCCGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR TCA 90 bp GCAGGGCATTGGGACCATCCACTAACTCCCAGTTTACCCTCTTTCCAGCAGTGTATCCTCATGGGATTATaGCAACGCACTGGATCCTTG +
Preference number: 2 (lower is better)
Translates to: AGHWDHPLTPSLPSFQQCILMGL*QRTGSL
Trigger: CAAGGATCCAGTGCGTTGTCATAATCCCATGAGGAT...ACACTGCTGGAAAGAGGGTAAACTGGGAGTTAGTGGATGGTCCCAATGCCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR GCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCCTGCCCTGTTTGGGCTaGGATTCAGGCTTACAAATA +
Preference number: 2 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVLPCLG*DSGLQI
Trigger: TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAG...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR TCA 90 bp GCAGGGCATTGGGACCATCCACTAACTCCCAGTTTACCCTCTTTCCAGCAGTGTTTGGGTAAGGAGTTTTaGAGGAGGTTTGAATGCAAG +
Preference number: 2 (lower is better)
Translates to: AGHWDHPLTPSLPSFQQCLGKEF*RRFECK
Trigger: CTTGCATTCAAACCTCCTTCAAAACTCCTTACCCAA...ACACTGCTGGAAAGAGGGTAAACTGGGAGTTAGTGGATGGTCCCAATGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR TCA 90 bp GCAGGGCATTGGGACCATCCACTAACTCCCAGTTTACCCTCTTTCCAGCAGTGTCACTTATTTTACAGATaGGGAAACAGCCATGGAGAG +
Preference number: 2 (lower is better)
Translates to: AGHWDHPLTPSLPSFQQCHLFYR*GNSHGE
Trigger: CTCTCCATGGCTGTTTCCTCATCTGTAAAATAAGTG...ACACTGCTGGAAAGAGGGTAAACTGGGAGTTAGTGGATGGTCCCAATGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR GCA 90 bp CCAATCACTGTGGGAGTTGTCATCAGAAATGCTATCTTTGGTTCCCAACAAATTCTGCCCTGCATGCTCTaGGCTCTGGCCAGAAGGCAT +
Preference number: 2 (lower is better)
Translates to: PITVGVVIRNAIFGSQQILPCML*ALARRH
Trigger: ATGCCTTCTGGCCAGAGCGCAGAGCATGCAGGGCAG...AATTTGTTGGGAACCAAAGATAGCATTTCTGATGACAACTCCCACAGTGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CAA 90 bp CCCTTCCCTGACTTTCCCACTGCCCTATTCCTAACTCAGGACATTTaGGAATCAACATTGAAAGATGTGCCCTCGTTATCTCAGGGCACA +
Preference number: 2 (lower is better)
Translates to: PFPDFPTALFLTQDI*ESTLKDVPSLSQGT
Trigger: TGTGCCCTGAGATAACGAGGGCACATCTTTCAATGTTGATTCCAAAATGTCCTGAGTTAGGAATAGGGCAGTGGGAAAGTCAGGGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR TCA 90 bp CCATACCAAAGCAGAGGGCAGACAACCTGTTTTAAAGCAGAAGAGTGTGTTTGGGCTTCACGGTGGAAGTaGCCACTTTATGGTCACTTC +
Preference number: 2 (lower is better)
Translates to: PYQSRGQTTCFKAEECVWASRWK*PLYGHF
Trigger: GAAGTGACCATAAAGTGGTCACTTCCACCGTGAAGC...CCAAACACACTCTTCTGCTTTAAAACAGGTTGTCTGCCCTCTGCTTTGGTATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR TCA 90 bp CTCCTCCTGGCTGATGTACTGAGATTAAAAACTCAATGCATTAGTAGCTACAGGCTGCCTACAGTGATCTaGAGGGTCACTGCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: LLLADVLRLKTQCISSYRLPTVI*RVTAPR
Trigger: CCTTGGAGCAGTGACCCTTCAGATCACTGTAGGCAG...CCTGTAGCTACTAATGCATTGAGTTTTTAATCTCAGTACATCAGCCAGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR GCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTCTGCCCTGTTTGGGCTaGGATTCAGGCTTACAAATA +
Preference number: 2 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTLPCLG*DSGLQI
Trigger: TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAG...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR TCA 90 bp CCATACCAAAGCAGAGGGCAGACAACCTGTTTTAAAGCAGAAGAGTGTGTTTGGACCCAACATGGTGACTaGTTTGAGGGGATTGTGTCA +
Preference number: 2 (lower is better)
Translates to: PYQSRGQTTCFKAEECVWTQHGD*FEGIVS
Trigger: TGACACAATCCCCTCAAATCAGTCACCATGTTGGGT...CCAAACACACTCTTCTGCTTTAAAACAGGTTGTCTGCCCTCTGCTTTGGTATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR GCA 90 bp CTCCTCCTGGCTGATGTACTGAGATTAAAAACTCAATGCATTAGTAGCTACAGGTTGCCGAGGCTGGAGTaGAATGGCATGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: LLLADVLRLKTQCISSYRLPRLE*NGMISA
Trigger: AGCTGAGATCATGCCATTGCACTCCAGCCTCGGCAA...CCTGTAGCTACTAATGCATTGAGTTTTTAATCTCAGTACATCAGCCAGGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR CCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCCATTGCTGCCCTGTTTaGGCTGCGATTCAGGCTTAC +
Preference number: 2 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFHCCPV*AAIQAY
Trigger: GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATG...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR TCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCAAGTTTCTATTCATTTaGAAGGTAAAGAACCCCCAC +
Preference number: 2 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVKFLFI*KVKNPH
Trigger: GTGGGGGTTCTTTACCTTTCAAATGAATAGAAACTT...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR TCA 90 bp CTCCTCCTGGCTGATGTACTGAGATTAAAAACTCAATGCATTAGTAGCTACAGGCCTAGGTTCAGAACCTaGACTCACCTAGCAGGATGT +
Preference number: 2 (lower is better)
Translates to: LLLADVLRLKTQCISSYRPRFRT*THLAGC
Trigger: ACATCCTGCTAGGTGAGTTCAGGTTCTGAACCTAGG...CCTGTAGCTACTAATGCATTGAGTTTTTAATCTCAGTACATCAGCCAGGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR TCA 90 bp ACTCAGGACATTTTGGAATCAACATTGAAAGATGTGCCCTCGTTATCTCAGGGCGGATGTAGCCTTCACTaGCCTCCCATTTCTTACAGA +
Preference number: 2 (lower is better)
Translates to: TQDILESTLKDVPSLSQGGCSLH*PPISYR
Trigger: TCTGTAAGAAATGGGAGGTCAGTGAAGGCTACATCC...GCCCTGAGATAACGAGGGCACATCTTTCAATGTTGATTCCAAAATGTCCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR GCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCTTCTTCCATCTTTCCTaGAGCAGAGTTTTATTTCAG +
Preference number: 2 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVFFHLS*SRVLFQ
Trigger: CTGAAATAAAACTCTGCTGCAGGAAAGATGGAAGAA...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR CAA 90 bp AGATGTGCCCTCGTTATCTCAGGGCACACTAGCAACATCAAAGATTaGGATAGACTCACCTGTGTCAAGATGAGCTTAAAAATCCAGGGA +
Preference number: 2 (lower is better)
Translates to: RCALVISGHTSNIKD*DRLTCVKMSLKIQG
Trigger: TCCCTGGATTTTTAAGCTCATCTTGACACAGGTGAGTCTATCCAAATCTTTGATGTTGCTAGTGTGCCCTGAGATAACGAGGGCACATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CAA 90 bp TTTCCCACTGCCCTATTCCTAACTCAGGACATTTTGGAATCAACATaGAAAGATGTGCCCTCGTTATCTCAGGGCACACTAGCAACATCA +
Preference number: 2 (lower is better)
Translates to: FPTALFLTQDILEST*KDVPSLSQGTLATS
Trigger: TGATGTTGCTAGTGTGCCCTGAGATAACGAGGGCACATCTTTCAATGTTGATTCCAAAATGTCCTGAGTTAGGAATAGGGCAGTGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CAA 90 bp CCCATTTATTTCCTTCCCAGTCCACATGCAAATACACGTTCAGAATaGTGTGCTGAGTTCACTTCAAATCCCAGGCCCATCAAACTGTCA +
Preference number: 2 (lower is better)
Translates to: PIYFLPSPHANTRSE*CAEFTSNPRPIKLS
Trigger: TGACAGTTTGATGGGCCTGGGATTTGAAGTGAACTCAGCACACAATTCTGAACGTGTATTTGCATGTGGACTGGGAAGGAAATAAATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR GCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCCTGCCCTGTTTGGGCTaGGATTCAGGCTTACAAATA +
Preference number: 2 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFLPCLG*DSGLQI
Trigger: TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAG...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR CCA 90 bp CCATACCAAAGCAGAGGGCAGACAACCTGTTTTAAAGCAGAAGAGTGTGTTTGGGGATGGTTAGATGGATaGATGTACCTTGGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: PYQSRGQTTCFKAEECVWGWLDG*MYLGKE
Trigger: TTCTTTGCCAAGGTACATCCATCCATCTAACCATCC...CCAAACACACTCTTCTGCTTTAAAACAGGTTGTCTGCCCTCTGCTTTGGTATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR CCA 90 bp CCATACCAAAGCAGAGGGCAGACAACCTGTTTTAAAGCAGAAGAGTGTGTTTGGGAAGGCATCTGCTTCTaGCATCTTTTCTATGTGTCT +
Preference number: 2 (lower is better)
Translates to: PYQSRGQTTCFKAEECVWEGICF*HLFYVS
Trigger: AGACACATAGAAAAGATGCCAGAAGCAGATGCCTTC...CCAAACACACTCTTCTGCTTTAAAACAGGTTGTCTGCCCTCTGCTTTGGTATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR GCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTTTCTTCCATCTTTCCTaGAGCAGAGTTTTATTTCAG +
Preference number: 2 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTFFHLS*SRVLFQ
Trigger: CTGAAATAAAACTCTGCTGCAGGAAAGATGGAAGAA...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR GCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACTTCTTCCATCTTTCCTaGAGCAGAGTTTTATTTCAG +
Preference number: 2 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYFFHLS*SRVLFQ
Trigger: CTGAAATAAAACTCTGCTGCAGGAAAGATGGAAGAA...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR CCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTCATTGCTGCCCTGTTTaGGCTGCGATTCAGGCTTAC +
Preference number: 2 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFHCCPV*AAIQAY
Trigger: GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATG...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR CCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTGAGGGGATTCACTACTaGCTCTTTCGCTTCACGGTG +
Preference number: 2 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFEGIHY*LFRFTV
Trigger: CACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCCTC...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR CCA 90 bp CCATACCAAAGCAGAGGGCAGACAACCTGTTTTAAAGCAGAAGAGTGTGTTTGGATCTCTTTCCCCTTCTaGCTGAATGTACATAAGTTC +
Preference number: 2 (lower is better)
Translates to: PYQSRGQTTCFKAEECVWISFPF*LNVHKF
Trigger: GAACTTATGTACATTCAGCCAGAAGGGGAAAGAGAT...CCAAACACACTCTTCTGCTTTAAAACAGGTTGTCTGCCCTCTGCTTTGGTATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR TCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTGCTTCACGGTGGAAGTaGCCACTTTATGGTCACTTC +
Preference number: 2 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFASRWK*PLYGHF
Trigger: GAAGTGACCATAAAGTGGTCACTTCCACCGTGAAGC...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR TCA 90 bp AACAATCTGGCGTTCAAGTTACTCGATTGTACCAAATGTGAATCCTTCAGCATCAGTGAATGCACAAAATaGGGGGATTCACTACTGGCT +
Preference number: 2 (lower is better)
Translates to: NNLAFKLLDCTKCESFSISECTK*GDSLLA
Trigger: AGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACT...GATGCTGAAGGATTCACATTTGGTACAATCGAGTAACTTGAACGCCAGATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR TCA 90 bp CCATACCAAAGCAGAGGGCAGACAACCTGTTTTAAAGCAGAAGAGTGTGTTTGGTTTTGGAATCAACATTaGAAGATGTGCCCTCGTTAT +
Preference number: 2 (lower is better)
Translates to: PYQSRGQTTCFKAEECVWFWNQH*KMCPRY
Trigger: ATAACGAGGGCACATCTTTCAATGTTGATTCCAAAA...CCAAACACACTCTTCTGCTTTAAAACAGGTTGTCTGCCCTCTGCTTTGGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR GCA 90 bp CCAATCACTGTGGGAGTTGTCATCAGAAATGCTATCTTTGGTTCCCAACAAATTAGACTGGGAGATACTTaGACTACTGGCCATACCTTT +
Preference number: 2 (lower is better)
Translates to: PITVGVVIRNAIFGSQQIRLGDT*TTGHTF
Trigger: AAAGGTATGGCCAGTAGTGCAAGTATCTCCCAGTCT...AATTTGTTGGGAACCAAAGATAGCATTTCTGATGACAACTCCCACAGTGATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR CCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCGAAGTGACCACTTTATaGTCACTTCAACATTGCTGC +
Preference number: 2 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFEVTTL*SLQHCC
Trigger: GCAGCAATGTTGAAGTGACCATAAAGTGGTCACTTC...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR CAA 90 bp CATTCTCTACTATCGCTGTTGATTTCCTCTTGGGTACTAAATCTGTaGAACATGTTGCCAGGCTTACTGCTGGTATTATGGGATAGCATT +
Preference number: 2 (lower is better)
Translates to: HSLLSLLISSWVLNL*NMLPGLLLVLWDSI
Trigger: AATGCTATCCCATAATACCAGCAGTAAGCCTGGCAACATGTTCAACAGATTTAGTACCCAAGAGGAAATCAACAGCGATAGTAGAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CAA 90 bp CTAGTATTTATCCCACTACATCTGACTCATTCTCTACTATCGCTGTaGATTTCCTCTTGGGTACTAAATCTGTTGAACATGTTGCCAGGC +
Preference number: 2 (lower is better)
Translates to: LVFIPLHLTHSLLSL*ISSWVLNLLNMLPG
Trigger: GCCTGGCAACATGTTCAACAGATTTAGTACCCAAGAGGAAATCAACAGCGATAGTAGAGAATGAGTCAGATGTAGTGGGATAAATACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR TCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGAAGTTTCTATTCATTTaGAAGGTAAAGAACCCCCAC +
Preference number: 2 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREKFLFI*KVKNPH
Trigger: GTGGGGGTTCTTTACCTTTCAAATGAATAGAAACTT...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR TCA 90 bp TCCCAGGCCCATCAAACTGTCAGTTTACAAATGCTGAATTTCAGTCCTCTTGTTACTAAGCAGCATATCTaGGGTGACTACCTCATTATT +
Preference number: 2 (lower is better)
Translates to: SQAHQTVSLQMLNFSPLVTKQHI*GDYLII
Trigger: AATAATGAGGTAGTCACCTCAGATATGCTGCTTAGT...AACAAGAGGACTGAAATTCAGCATTTGTAAACTGACAGTTTGATGGGCCTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR GCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGTTCTTCCATCTTTCCTaGAGCAGAGTTTTATTTCAG +
Preference number: 2 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREFFHLS*SRVLFQ
Trigger: CTGAAATAAAACTCTGCTGCAGGAAAGATGGAAGAA...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR GCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTCTGCCCTGTTTGGGCTaGGATTCAGGCTTACAAATA +
Preference number: 2 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFLPCLG*DSGLQI
Trigger: TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAG...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR GCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTTCACTTCAACATTGCTaGCCTGTTTGGGCTGCGATT +
Preference number: 2 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFSLQHC*PVWAAI
Trigger: AATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGA...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR CAA 90 bp TATCTTGCAAGTTCAACCCAATTAAGTGGCAGTAAATGCTACAAGTaGTATAGAATACTCGTACACACAGGTGTGCACATGGAGGTGATA +
Preference number: 2 (lower is better)
Translates to: YLASSTQLSGSKCYK*YRILVHTGVHMEVI
Trigger: TATCACCTCCATGTGCACACCTGTGTGTACGAGTATTCTATACAACTTGTAGCATTTACTGCCACTTAATTGGGTTGAACTTGCAAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CAA 90 bp TTCCAGCAGTGTACTCATCATACAACTGGCCAATCACTGTGGGAGTaGTCATCAGAAATGCTATCTTTGGTTCCCAACAAATTAATTTGT +
Preference number: 2 (lower is better)
Translates to: FQQCTHHTTGQSLWE*SSEMLSLVPNKLIC
Trigger: ACAAATTAATTTGTTGGGAACCAAAGATAGCATTTCTGATGACAACTCCCACAGTGATTGGCCAGTTGTATGATGAGTACACTGCTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR TCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCAAGTTTCTATTCATTTaGAAGGTAAAGAACCCCCAC +
Preference number: 2 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFKFLFI*KVKNPH
Trigger: GTGGGGGTTCTTTACCTTTCAAATGAATAGAAACTT...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR CCA 90 bp TCCCAGGCCCATCAAACTGTCAGTTTACAAATGCTGAATTTCAGTCCTCTTGTTGTATCTATTTCCTCCTaGTATGCCTATTTTACAGTG +
Preference number: 2 (lower is better)
Translates to: SQAHQTVSLQMLNFSPLVVSISS*YAYFTV
Trigger: CACTGTAAAATAGGCATACCAGGAGGAAATAGATAC...AACAAGAGGACTGAAATTCAGCATTTGTAAACTGACAGTTTGATGGGCCTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR CCA 90 bp CTCCTCCTGGCTGATGTACTGAGATTAAAAACTCAATGCATTAGTAGCTACAGGATTATGACAACGCACTaGATCCTTGCTAACAACATT +
Preference number: 2 (lower is better)
Translates to: LLLADVLRLKTQCISSYRIMTTH*ILANNI
Trigger: AATGTTGTTAGCAAGGATCCAGTGCGTTGTCATAAT...CCTGTAGCTACTAATGCATTGAGTTTTTAATCTCAGTACATCAGCCAGGAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR CCA 90 bp CCAATCACTGTGGGAGTTGTCATCAGAAATGCTATCTTTGGTTCCCAACAAATTAGATACTTGCACTACTaGCCATACCTTTGCTTAACT +
Preference number: 2 (lower is better)
Translates to: PITVGVVIRNAIFGSQQIRYLHY*PYLCLT
Trigger: AGTTAAGCAAAGGTATGGCCAGTAGTGCAAGTATCT...AATTTGTTGGGAACCAAAGATAGCATTTCTGATGACAACTCCCACAGTGATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR TCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAAGTTTCTATTCATTTaGAAGGTAAAGAACCCCCAC +
Preference number: 2 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHKFLFI*KVKNPH
Trigger: GTGGGGGTTCTTTACCTTTCAAATGAATAGAAACTT...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR TCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAAAGTTTCTATTCATTTaGAAGGTAAAGAACCCCCAC +
Preference number: 2 (lower is better)
Translates to: STLLPCLGCDSGLQINYIKFLFI*KVKNPH
Trigger: GTGGGGGTTCTTTACCTTTCAAATGAATAGAAACTT...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR TCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTACAAACACAACACTATaGAGAGGGAGTGTGCATCTT +
Preference number: 2 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFTNTTL*RGSVHL
Trigger: AAGATGCACACTCCCTCTTCATAGTGTTGTGTTTGT...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR TCA 90 bp AACAATCTGGCGTTCAAGTTACTCGATTGTACCAAATGTGAATCCTTCAGCATCCAGTCACTAATGTACTaGTTTTTATTTGCATCCCAG +
Preference number: 2 (lower is better)
Translates to: NNLAFKLLDCTKCESFSIQSLMY*FLFASQ
Trigger: CTGGGATGCAAATAAAAATCAGTACATTAGTGACTG...GATGCTGAAGGATTCACATTTGGTACAATCGAGTAACTTGAACGCCAGATTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR CCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTGAAGTGACCACTTTATaGTCACTTCAACATTGCTGC +
Preference number: 2 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFEVTTL*SLQHCC
Trigger: GCAGCAATGTTGAAGTGACCATAAAGTGGTCACTTC...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR CCA 90 bp AACAGAACTATAACTGAATGCCAACAGGCAGAGACAGTCCTACATATTTGTTTAGAGCCAAATATTGATTaGGATGTAGCCTTCACTGAC +
Preference number: 2 (lower is better)
Translates to: NRTITECQQAETVLHICLEPNID*DVAFTD
Trigger: GTCAGTGAAGGCTACATCCCAATCAATATTTGGCTC...TAAACAAATATGTAGGACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR TCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTGGGAGTGTGCATCTTTaGGAAACCTTTTTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFGSVHL*ETFFFK
Trigger: TTTGAAGAAAAAGGTTTCTCAAAGATGCACACTCCC...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR GCA 90 bp CCAATCACTGTGGGAGTTGTCATCAGAAATGCTATCTTTGGTTCCCAACAAATTTATTTCCTCCTGGTATaGCTATTTTACAGTGCATAT +
Preference number: 2 (lower is better)
Translates to: PITVGVVIRNAIFGSQQIYFLLV*LFYSAY
Trigger: ATATGCACTGTAAAATAGGCATACCAGGAGGAAATA...AATTTGTTGGGAACCAAAGATAGCATTTCTGATGACAACTCCCACAGTGATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR CCA 90 bp AACAGAACTATAACTGAATGCCAACAGGCAGAGACAGTCCTACATATTTGTTTAGCAGAAGAGTGTGTTTaGAGTTCTAATAGTGACATC +
Preference number: 2 (lower is better)
Translates to: NRTITECQQAETVLHICLAEECV*SSNSDI
Trigger: GATGTCACTATTAGAACTCCAAACACACTCTTCTGC...TAAACAAATATGTAGGACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR GCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTTTCTTCCATCTTTCCTaGAGCAGAGTTTTATTTCAG +
Preference number: 2 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFFFHLS*SRVLFQ
Trigger: CTGAAATAAAACTCTGCTGCAGGAAAGATGGAAGAA...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR GCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTTATGAAGAGGGAGTGTaGATCTTTGAGAAACCTTTT +
Preference number: 2 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFYEEGV*IFEKPF
Trigger: AAAAGGTTTCTCAAAGATGCACACTCCCTCTTCATA...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR CAA 90 bp ACAATTCTGATAAACAATGAAAACGTGGATCCTTCTCAACTTGTTTaGTGTAGATGTTATGAGTATAATCCCAGTAGACATCACTACCCT +
Preference number: 2 (lower is better)
Translates to: TILINNENVDPSQLV*CRCYEYNPSRHHYP
Trigger: AGGGTAGTGATGTCTACTGGGATTATACTCATAACATCTACACAAAACAAGTTGAGAAGGATCCACGTTTTCATTGTTTATCAGAATTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR GCA 72 bp AGTCTCCTAAGAAAGCGTGTGCCATACCCGAGCGTGTaGCAACCTCAGCACCCAGGCAAGCATAAAGCCTAT +
Preference number: 3 (lower is better)
Translates to: SLLRKRVPYPSV*QPQHPGKHKAY
Trigger: ATAGGCTTTATGCTTGCCTGGGTGCTGAGGTTGGCACACGCTCGGGTATGGCACACGCTTTCTTAGGAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR GCA 72 bp TGCCCTGCATGCTCTGCGCTCTGGCCAGAAGGCATCTaGTTCTGGCATCTTTTCTATGTGTCTATAGTTCCC +
Preference number: 3 (lower is better)
Translates to: CPACSALWPEGI*FWHLFYVSIVP
Trigger: GGGAACTATAGACACATAGAAAAGATGCCAGAAGCAGATGCCTTCTGGCCAGAGCGCAGAGCATGCAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CCA 72 bp AGCACACACATTGAACTTGAATTTTGCACTCAGGGCTaGTTGGCACTCTGCTGTAGGCAGGGCATTGGGACC +
Preference number: 3 (lower is better)
Translates to: STHIELEFCTQG*LALCCRQGIGT
Trigger: GGTCCCAATGCCCTGCCTACAGCAGAGTGCCAACCAGCCCTGAGTGCAAAATTCAAGTTCAATGTGTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR CAA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACATTGCTGCCCTGTTaGGGCTGCGATTCAGGCTTA +
Preference number: 3 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVTLLPC*GCDSGL
Trigger: TAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGT...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR CAA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTACATTGCTGCCCTGTTaGGGCTGCGATTCAGGCTTA +
Preference number: 3 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTTLLPC*GCDSGL
Trigger: TAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGT...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR TCA 72 bp GGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTaGCCACTTTATGGTCACTTCAACATTGCTGCCCTG +
Preference number: 3 (lower is better)
Translates to: GFTTGSFASRWK*PLYGHFNIAAL
Trigger: CAGGGCAGCAATGTTGAAGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR GCA 72 bp GGAATAATTGTAACTAGCAAATATCTCTGCCCTGCATaGTCTGCGCTCTGGCCAGAAGGCATCTGCTTCTGG +
Preference number: 3 (lower is better)
Translates to: GIIVTSKYLCPA*SALWPEGICFW
Trigger: CCAGAAGCAGATGCCTTCTGGCCAGAGCGCAGAGCATGCAGGGCAGAGATATTTGCTAGTTACAATTATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR GCA 72 bp TTGCCAGGCTTACTGCTGGTATTATGGGATAGCATTTaGCTGATGGCAGCTTCTAAAGGAGACTCCGATGGC +
Preference number: 3 (lower is better)
Translates to: LPGLLLVLWDSI*LMAASKGDSDG
Trigger: GCCATCGGAGTCTCCTTTAGAAGCTGCCATCAGGCAAATGCTATCCCATAATACCAGCAGTAAGCCTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CCA 72 bp GTGCTTCACCGGGGAGGGATAGATGTAAGGATCAGGTaGTTAAACTCAAACATTGGGGTGCAGTTCACAAGC +
Preference number: 3 (lower is better)
Translates to: VLHRGGIDVRIR*LNSNIGVQFTS
Trigger: GCTTGTGAACTGCACCCCAATGTTTGAGTTTAACCACCTGATCCTTACATCTATCCCTCCCCGGTGAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR CAA 90 bp GCAGGGCATTGGGACCATCCACTAACTCCCAGTTTACCCTCTTTCCAGCAGTGTTACATTTATCTGGTTTaGGCTCTCAGAGAAAGTCCC +
Preference number: 3 (lower is better)
Translates to: AGHWDHPLTPSLPSFQQCYIYLV*ALRESP
Trigger: GGGACTTTCTCTGAGAGCCAAAACCAGATAAATGTA...ACACTGCTGGAAAGAGGGTAAACTGGGAGTTAGTGGATGGTCCCAATGCCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR TCA 72 bp CAGGCTTACTGCTGGTATTATGGGATAGCATTTGCCTaGTGGCAGCTTCTAAAGGAGACTCCGATGGCACTA +
Preference number: 3 (lower is better)
Translates to: QAYCWYYGIAFA*WQLLKETPMAL
Trigger: TAGTGCCATCGGAGTCTCCTTTAGAAGCTGCCATCAGGCAAATGCTATCCCATAATACCAGCAGTAAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR CAA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCATGGTCACTTCAACATaGCTGCCCTGTTTGGGCTGC +
Preference number: 3 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFMVTST*LPCLGC
Trigger: GCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR GCA 72 bp CTCCAATCTAAAGCAACCACAAAACAGACACCCGAATaGCATACCAAAGCAGAGGGCAGACAACCTGTTTTA +
Preference number: 3 (lower is better)
Translates to: LQSKATTKQTPE*HTKAEGRQPVL
Trigger: TAAAACAGGTTGTCTGCCCTCTGCTTTGGTATGGCATTCGGGTGTCTGTTTTGTGGTTGCTTTAGATTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CCA 72 bp CTGTTGAACATGTTGCCAGGCTTACTGCTGGTATTATaGGATAGCATTTGCCTGATGGCAGCTTCTAAAGGA +
Preference number: 3 (lower is better)
Translates to: LLNMLPGLLLVL*DSICLMAASKG
Trigger: TCCTTTAGAAGCTGCCATCAGGCAAATGCTATCCCATAATACCAGCAGTAAGCCTGGCAACATGTTCAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CCA 72 bp CAGCAGTGTACTCATCATACAACTGGCCAATCACTGTaGGAGTTGTCATCAGAAATGCTATCTTTGGTTCCC +
Preference number: 3 (lower is better)
Translates to: QQCTHHTTGQSL*ELSSEMLSLVP
Trigger: GGGAACCAAAGATAGCATTTCTGATGACAACTCCCACAGTGATTGGCCAGTTGTATGATGAGTACACTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR TCA 72 bp CAATCTGGCGTTCAAGTTACTCGATTGTACCAAATGTaGATCCTTCAGCATCACTGTGGCATGAGAAACAGC +
Preference number: 3 (lower is better)
Translates to: QSGVQVTRLYQM*ILQHHCGMRNS
Trigger: GCTGTTTCTCATGCCACAGTGATGCTGAAGGATTCACATTTGGTACAATCGAGTAACTTGAACGCCAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CCA 72 bp TTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTaGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTA +
Preference number: 3 (lower is better)
Translates to: FKVNAQNEGIHY*LFRFTVEVTTL
Trigger: TAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR CCA 72 bp TTTACCCTCTTTCCAGCAGTGTACTCATCATACAACTaGCCAATCACTGTGGGAGTTGTCATCAGAAATGCT +
Preference number: 3 (lower is better)
Translates to: FTLFPAVYSSYN*PITVGVVIRNA
Trigger: AGCATTTCTGATGACAACTCCCACAGTGATTGGCCAGTTGTATGATGAGTACACTGCTGGAAAGAGGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CCA 72 bp GAGTATAATCCCAGTAGACATCACTACCCTGTGATCTaGCTCCTCCTGGCTGATGTACTGAGATTAAAAACT +
Preference number: 3 (lower is better)
Translates to: EYNPSRHHYPVI*LLLADVLRLKT
Trigger: AGTTTTTAATCTCAGTACATCAGCCAGGAGGAGCCAGATCACAGGGTAGTGATGTCTACTGGGATTATACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR CAA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTGAAGTTTCTATTCATTaGAAAGGTAAAGAACCCCCA +
Preference number: 3 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTEVSIH*KGKEPP
Trigger: TGGGGGTTCTTTACCTTTCAAATGAATAGAAACTTC...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR CAA 90 bp ACTCAGGACATTTTGGAATCAACATTGAAAGATGTGCCCTCGTTATCTCAGGGCAGCAACATCAAAGATTaGGATAGACTCACCTGTGTC +
Preference number: 3 (lower is better)
Translates to: TQDILESTLKDVPSLSQGSNIKD*DRLTCV
Trigger: GACACAGGTGAGTCTATCCAAATCTTTGATGTTGCT...GCCCTGAGATAACGAGGGCACATCTTTCAATGTTGATTCCAAAATGTCCTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR GCA 72 bp CTGCAACATAAGAGACTCAGGCTTAAACGTGATATTTaGCATCACTATAGCAGGCTGAATTTGCAAGGCAAC +
Preference number: 3 (lower is better)
Translates to: LQHKRLRLKRDI*HHYSRLNLQGN
Trigger: GTTGCCTTGCAAATTCAGCCTGCTATAGTGATGGCAAATATCACGTTTAAGCCTGAGTCTCTTATGTTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR CAA 90 bp CCAATCACTGTGGGAGTTGTCATCAGAAATGCTATCTTTGGTTCCCAACAAATTAACATGGTGACTGATTaGAGGGGATTGTGTCATCTG +
Preference number: 3 (lower is better)
Translates to: PITVGVVIRNAIFGSQQINMVTD*RGLCHL
Trigger: CAGATGACACAATCCCCTCAAATCAGTCACCATGTT...AATTTGTTGGGAACCAAAGATAGCATTTCTGATGACAACTCCCACAGTGATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR CAA 90 bp CTCCTCCTGGCTGATGTACTGAGATTAAAAACTCAATGCATTAGTAGCTACAGGCAATCACTGTGGGAGTaGTCATCAGAAATGCTATCT +
Preference number: 3 (lower is better)
Translates to: LLLADVLRLKTQCISSYRQSLWE*SSEMLS
Trigger: AGATAGCATTTCTGATGACAACTCCCACAGTGATTG...CCTGTAGCTACTAATGCATTGAGTTTTTAATCTCAGTACATCAGCCAGGAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR TCA 72 bp ATCAGCAAGAACGAAGTCATTACCCAACATGGTGACTaGTTTGAGGGGATTGTGTCATCTGAAAATCCTCAT +
Preference number: 3 (lower is better)
Translates to: ISKNEVITQHGD*FEGIVSSENPH
Trigger: ATGAGGATTTTCAGATGACACAATCCCCTCAAATCAGTCACCATGTTGGGTAATGACTTCGTTCTTGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CCA 72 bp GGGCAGACAACCTGTTTTAAAGCAGAAGAGTGTGTTTaGAGTTCTAATAGTGACATCTCCCTAGCTTTAACT +
Preference number: 3 (lower is better)
Translates to: GQTTCFKAEECV*SSNSDISLALT
Trigger: AGTTAAAGCTAGGGAGATGTCACTATTAGAACTCCAAACACACTCTTCTGCTTTAAAACAGGTTGTCTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR CAA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATGAAGTTTCTATTCATTaGAAAGGTAAAGAACCCCCA +
Preference number: 3 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINEVSIH*KGKEPP
Trigger: TGGGGGTTCTTTACCTTTCAAATGAATAGAAACTTC...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR TCA 72 bp AGTAAAGAAGTACCTGGCTCCTCATTGTTAATATGCTaGACTGAAAGCATAAGAGAGAAGCCATTTCTCTGC +
Preference number: 3 (lower is better)
Translates to: SKEVPGSSLLIC*TESIREKPFLC
Trigger: GCAGAGAAATGGCTTCTCTCTTATGCTTTCAGTTCAGCATATTAACAATGAGGAGCCAGGTACTTCTTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CCA 72 bp AAAAATGGGAAGAGGTACTTAGAGCCAAATATTGATTaGGATGTAGCCTTCACTGACCTCCCATTTCTTACA +
Preference number: 3 (lower is better)
Translates to: KNGKRYLEPNID*DVAFTDLPFLT
Trigger: TGTAAGAAATGGGAGGTCAGTGAAGGCTACATCCCAATCAATATTTGGCTCTAAGTACCTCTTCCCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CCA 72 bp GATAGATGTAAGGATCAGGTGGTTAAACTCAAACATTaGGGTGCAGTTCACAAGCCTGAAAGAAATCTGAAT +
Preference number: 3 (lower is better)
Translates to: DRCKDQVVKLKH*GAVHKPERNLN
Trigger: ATTCAGATTTCTTTCAGGCTTGTGAACTGCACCCCAATGTTTGAGTTTAACCACCTGATCCTTACATCTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR CAA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGAAGTTTCTATTCATTaGAAAGGTAAAGAACCCCCA +
Preference number: 3 (lower is better)
Translates to: STLLPCLGCDSGLQINYIEVSIH*KGKEPP
Trigger: TGGGGGTTCTTTACCTTTCAAATGAATAGAAACTTC...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR-3UTR CAA 90 bp AACAGAACTATAACTGAATGCCAACAGGCAGAGACAGTCCTACATATTTGTTTAACTGATTTGAGGGGATaGTGTCATCTGAAAATCCTC +
Preference number: 3 (lower is better)
Translates to: NRTITECQQAETVLHICLTDLRG*CHLKIL
Trigger: GAGGATTTTCAGATGACACAATCCCCTCAAATCAGT...TAAACAAATATGTAGGACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CCA 72 bp TCATCTGAAAATCCTCATGGGATTATGACAACGCACTaGATCCTTGCTAACAACATTAACGTTCTTTCCTTT +
Preference number: 3 (lower is better)
Translates to: SSENPHGIMTTH*ILANNINVLSF
Trigger: AAAGGAAAGAACGTTAATGTTGTTAGCAAGGATCCAGTGCGTTGTCATAATCCCATGAGGATTTTCAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR GCA 72 bp TATCTTGCAAGTTCAACCCAATTAAGTGGCAGTAAATaGTACAAGTTGTATAGAATACTCGTACACACAGGT +
Preference number: 3 (lower is better)
Translates to: YLASSTQLSGSK*YKLYRILVHTG
Trigger: ACCTGTGTGTACGAGTATTCTATACAACTTGTAGCATTTACTGCCACTTAATTGGGTTGAACTTGCAAGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR-3UTR CAA 90 bp AACAGAACTATAACTGAATGCCAACAGGCAGAGACAGTCCTACATATTTGTTTAATTTTGGAATCAACATaGAAAGATGTGCCCTCGTTA +
Preference number: 3 (lower is better)
Translates to: NRTITECQQAETVLHICLILEST*KDVPSL
Trigger: TAACGAGGGCACATCTTTCAATGTTGATTCCAAAAT...TAAACAAATATGTAGGACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR TCA 72 bp GGCTGCGATTCAGGCTTACAAATAAATTACATAATCTaGGGGAGTAGGAAAAAGGCTTATAAGAAGTTTCTA +
Preference number: 3 (lower is better)
Translates to: GCDSGLQINYII*GSRKKAYKKFL
Trigger: TAGAAACTTCTTATAAGCCTTTTTCCTACTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR CCA 72 bp AATGTCCAACAAGGATTTCAGTATTCTACATTTATCTaGTTTTGGCTCTCAGAGAAAGTCCCATCTTTGTTT +
Preference number: 3 (lower is better)
Translates to: NVQQGFQYSTFI*FWLSEKVPSLF
Trigger: AAACAAAGATGGGACTTTCTCTGAGAGCCAAAACCAGATAAATGTAGAATACTGAAATCCTTGTTGGACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCGGTGGGCACTGCCCATaGGAAGGGTCCGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVGGHCP*EGSGLA
Trigger: AGCCAGCCCGGACCCTTCTCATGGGCAGTGCCCACC...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAGGGTGCGGGCTCACGTaGGCCCCATGGCCCGGGGAT +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIGCGLT*APWPGD
Trigger: ATCCCCGGGCCATGGGGCGCACGTGAGCCCGCACCC...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425146.5
ENST00000446737.5
CDS-3UTR GCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATACCCATGGCCCGGGGATaGGCGCGCGTCTGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIPMARG*ARVWVC
Trigger: ACACACCCAGACGCGCGCGCATCCCCGGGCCATGGG...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425146.5
ENST00000446737.5
CDS-3UTR GCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTGGCAGCCGAGGGTTCTaGCCTTCGCTGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTGSRGF*PSLLGR
Trigger: CCTGCCCAGCAGCGAAGGGCAGAACCCTCGGCTGCC...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425146.5
ENST00000446737.5
CDS-3UTR CCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCCTGCTGAGGATGCTCTaGCGAGAGGCAGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVLLRML*REAGLG
Trigger: ACCCAGCCCTGCCTCTCGCCAGAGCATCCTCAGCAG...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425146.5
ENST00000446737.5
CDS-3UTR GCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACGGTTCTGCCCTTCGCTaGTGGGCAGGAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYGSALR*WAGGAG
Trigger: CCCTGCTCCTCCTGCCCAGCAGCGAAGGGCAGAACC...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425146.5
ENST00000446737.5
CDS-3UTR GCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAGGCAGCCGAGGGTTCTaGCCTTCGCTGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIGSRGF*PSLLGR
Trigger: CCTGCCCAGCAGCGAAGGGCAGAACCCTCGGCTGCC...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425146.5
ENST00000446737.5
3UTR CAA 72 bp CTCAGGGCTGGTTGGCACTCTGCTGTAGGCAGGGCATaGGGACCATCCACTAACTCCCAGTTTACCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LRAGWHSAVGRA*GPSTNSQFTLF
Trigger: AAAGAGGGTAAACTGGGAGTTAGTGGATGGTCCCAATGCCCTGCCTACAGCAGAGTGCCAACCAGCCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTGGTGGGCACTGCCCATaGGAAGGGTCCGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCGGHCP*EGSGLA
Trigger: AGCCAGCCCGGACCCTTCTCATGGGCAGTGCCCACC...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR TCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACTTCGGTGGCAGCTGCTaGGGATGCTCTGGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYFGGSC*GCSGER
Trigger: CCTCTCGCCAGAGCATCCTCAGCAGCTGCCACCGAA...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425146.5
ENST00000446737.5
CDS-3UTR GCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCGCTGGGCACACCAGCTaGCACAAGATGCAAGGACTC +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVAGHTS*HKMQGL
Trigger: GAGTCCTTGCATCTTGTGGCAGCTGGTGTGCCCAGC...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTCCCAGACGGTTAGCTaGCACAGCTGCCCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINSQTVS*HSCPPA
Trigger: CGCGGGCGGGCAGCTGTGCCAGCTAACCGTCTGGGA...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTGGATGCGCGCGCGTCTaGGTGTGTGAGAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTGCARV*VCESIW
Trigger: CCAGATGCTCTCACACACCCAGACGCGCGCGCATCC...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425146.5
ENST00000446737.5
CDS-3UTR CCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACCTGCTGAGGATGCTCTaGCGAGAGGCAGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYLLRML*REAGLG
Trigger: ACCCAGCCCTGCCTCTCGCCAGAGCATCCTCAGCAG...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425146.5
ENST00000446737.5
CDS-3UTR TCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCCCCTGGGCACATCTGTaGGCCATAGAGATCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVPWAHL*AIEIWS
Trigger: ACTCCAGATCTCTATGGCTCACAGATGTGCCCAGGG...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262836.6
ENST00000372010.5
CDS-3UTR GCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATGGTTCTGCCCTTCGCTaGTGGGCAGGAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINGSALR*WAGGAG
Trigger: CCCTGCTCCTCCTGCCCAGCAGCGAAGGGCAGAACC...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425146.5
ENST00000446737.5
CDS-3UTR CCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCAGGGGCCATGGGAAGTaGTTTGGAGCTGTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVRGHGK*FGAVVE
Trigger: CTCAACCACAGCTCCAAACCACTTCCCATGGCCCCT...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GCAGGGCATTGGGACCATCCACTAACTCCCAGTTTACCCTCTTTCCAGCAGTGTGCTGTGGTTGAGTGCTaGAGAATCCCGGTTGTTACT +
Preference number: 4 (lower is better)
Translates to: AGHWDHPLTPSLPSFQQCAVVEC*RIPVVT
Trigger: AGTAACAACCGGGATTCTTCAGCACTCAACCACAGC...ACACTGCTGGAAAGAGGGTAAACTGGGAGTTAGTGGATGGTCCCAATGCCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp AACAATCTGGCGTTCAAGTTACTCGATTGTACCAAATGTGAATCCTTCAGCATCGGTGGGCACTGCCCATaGGAAGGGTCCGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: NNLAFKLLDCTKCESFSIGGHCP*EGSGLA
Trigger: AGCCAGCCCGGACCCTTCTCATGGGCAGTGCCCACC...GATGCTGAAGGATTCACATTTGGTACAATCGAGTAACTTGAACGCCAGATTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGTTCGGTGGCAGCTGCTaGGGATGCTCTGGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREFGGSC*GCSGER
Trigger: CCTCTCGCCAGAGCATCCTCAGCAGCTGCCACCGAA...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425146.5
ENST00000446737.5
CDS-3UTR GCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATCCATACCCGAGCGTGTaGCAACCTCAGCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINPYPSV*QPQHPG
Trigger: GCCTGGGTGCTGAGGTTGGCACACGCTCGGGTATGG...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp GCAGGGCATTGGGACCATCCACTAACTCCCAGTTTACCCTCTTTCCAGCAGTGTTGTATGCTCTGGTCTTaGTGCGATAACTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: AGHWDHPLTPSLPSFQQCCMLWS*CDNWWW
Trigger: CCACCACCAGTTATCGCACCAAGACCAGAGCATACA...ACACTGCTGGAAAGAGGGTAAACTGGGAGTTAGTGGATGGTCCCAATGCCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCGCTGCAAAAGCTCCTTaGCAGATCCTCGCCTATCCA +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVAAKAP*QILAYP
Trigger: TGGATAGGCGAGGATCTGCCAAGGAGCTTTTGCAGC...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCCATTGCTGCCCTGTTTaGGCTGCGATTCAGGCTTAC +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVHCCPV*AAIQAY
Trigger: GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATG...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTGGACTTCAGCACAGGTaGGCACTGCCCATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTGLQHR*ALPMRR
Trigger: CCTTCTCATGGGCAGTGCCCACCTGTGCTGAAGTCC...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCCAGCAGAGGGTGGTGTaGCCTCTTTATTTGGTACTG +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVQQRVV*PLYLVL
Trigger: CAGTACCAAATAAAGAGGTCACACCACCCTCTGCTG...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCGCTTCACGGTGGAAGTaGCCACTTTATGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVASRWK*PLYGHF
Trigger: GAAGTGACCATAAAGTGGTCACTTCCACCGTGAAGC...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCGAAACCTTTACACCTTaGTCATCCCAGAACAGGGCC +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVETFTP*SSQNRA
Trigger: GGCCCTGTTCTGGGATGAGCAAGGTGTAAAGGTTTC...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAGCTGGGCACACCAGCTaGCACAAGATGCAAGGACTC +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIAGHTS*HKMQGL
Trigger: GAGTCCTTGCATCTTGTGGCAGCTGGTGTGCCCAGC...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ACTCAGGACATTTTGGAATCAACATTGAAAGATGTGCCCTCGTTATCTCAGGGCTCACACCGCCACCGCTaGAGGACTTCAGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: TQDILESTLKDVPSLSQGSHRHR*RTSAQV
Trigger: CACCTGTGCTGAAGTCCTGCAGCGGTGGCGGTGTGA...GCCCTGAGATAACGAGGGCACATCTTTCAATGTTGATTCCAAAATGTCCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCTTTATCCCCTCCTCCTaGGAAGATAGAGCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVFIPSS*EDRAKP
Trigger: AGGCTTCGCTCTATCTTCCCAGGAGGAGGGGATAAA...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTCTCTGGAATTCCCTCTaGGAGCTTCCCTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTLWNSL*ELPWAH
Trigger: ATGTGCCCAGGGAAGCTCCCAGAGGGAATTCCAGAG...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372010.5
CDS-3UTR CCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCTGTATGCTCTGGTCTTaGTGCGATAACTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVCMLWS*CDNWWW
Trigger: CCACCACCAGTTATCGCACCAAGACCAGAGCATACA...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCTGCTCAGGAGTGATCTaGGCACAGAACCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVCSGVI*AQNPKS
Trigger: TGACTTTGGGTTCTGTGCCCAGATCACTCCTGAGCA...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GCAGGGCATTGGGACCATCCACTAACTCCCAGTTTACCCTCTTTCCAGCAGTGTCTCAAGTCTAGAATCTaGAACTGGATTCTGCCACGG +
Preference number: 4 (lower is better)
Translates to: AGHWDHPLTPSLPSFQQCLKSRI*NWILPR
Trigger: CCGTGGCAGAATCCAGTTCCAGATTCTAGACTTGAG...ACACTGCTGGAAAGAGGGTAAACTGGGAGTTAGTGGATGGTCCCAATGCCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAGTTCCAGCCTCTTCTTaGTCAGAGCGAAGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIVPASS*SERRRA
Trigger: CGCCCTCCTTCGCTCTGACCAAGAAGAGGCTGGAAC...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425146.5
ENST00000446737.5
CDS-3UTR TCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTGTTTGGAGCTGTGGTTaGGTGCTGAAGAATCCCGGT +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTVWSCG*VLKNPG
Trigger: ACCGGGATTCTTCAGCACTCAACCACAGCTCCAAAC...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACGTTTGGAGCTGTGGTTaGGTGCTGAAGAATCCCGGT +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYVWSCG*VLKNPG
Trigger: ACCGGGATTCTTCAGCACTCAACCACAGCTCCAAAC...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTCCATACAGGTCTCTGTaGCCACATCAGTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTPYRSL*PHQSES
Trigger: GCTCTCTGACTGATGTGGTCACAGAGACCTGTATGG...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACCCATACAGGTCTCTGTaGCCACATCAGTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYPYRSL*PHQSES
Trigger: GCTCTCTGACTGATGTGGTCACAGAGACCTGTATGG...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GCAGGGCATTGGGACCATCCACTAACTCCCAGTTTACCCTCTTTCCAGCAGTGTAGTGAATGCACAAAATaGGGGGATTCACTACTGGCT +
Preference number: 4 (lower is better)
Translates to: AGHWDHPLTPSLPSFQQCSECTK*GDSLLA
Trigger: AGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACT...ACACTGCTGGAAAGAGGGTAAACTGGGAGTTAGTGGATGGTCCCAATGCCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACCTTCTCACCCTTCCCTaGCTTTCCCACTGCCCTATT +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYLLTLP*LSHCPI
Trigger: AATAGGGCAGTGGGAAAGTCAGGGAAGGGTGAGAAG...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCGAATTCCCCGGTGACTaGATCAAACCCCACATGAAT +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVEFPGD*IKPHMN
Trigger: ATTCATGTGGGGTTTGATGCAGTCACCGGGGAATTC...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTCGAAGGATGGGCTaGTATGTATCCATGTGCACT +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVTRRMG*YVSMCT
Trigger: AGTGCACATGGATACATAGCAGCCCATCCTTCGAGT...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACATGCTCTGGTCTTGGTaGGATAACTGGTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYMLWSW*DNWWWL
Trigger: GAGCCACCACCAGTTATCGCACCAAGACCAGAGCAT...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTATGCTCTGGTCTTGGTaGGATAACTGGTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTMLWSW*DNWWWL
Trigger: GAGCCACCACCAGTTATCGCACCAAGACCAGAGCAT...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCCTCTCTGCAGACAGCTaGTATCTGTCCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVLSADS*YLSFIH
Trigger: ATGGATGAAGGACAGATAGCAGCTGTCTGCAGAGAG...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTCTTGCAGGCACTCTCTaGAGACAGCTGCTATCTGTC +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTLAGTL*RQLLSV
Trigger: GACAGATAGCAGCTGTCTGCAGAGAGTGCCTGCAAG...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACGTGAGGTGTAAGGCTTaGAGTCTTAGCGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYVRCKA*SLSGCC
Trigger: ACAGCAGCCGCTAAGACTGCAAGCCTTACACCTCAC...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCTCACTTCAACATTGCTaGCCTGTTTGGGCTGCGATT +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVSLQHC*PVWAAI
Trigger: AATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGA...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTTGGTCACTTCAACATTaGTGCCCTGTTTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTWSLQH*CPVWAA
Trigger: CGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCA...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTCCAGCTGCCACAAGATaGAAGGACTCAGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTPAATR*KDSAAL
Trigger: AAGAGCAGCTGAGTCCTTGCATCTTGTGGCAGCTGG...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR GCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTTCACACCGCCACCGCTaGAGGACTTCAGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSSHRHR*RTSAQV
Trigger: CACCTGTGCTGAAGTCCTGCAGCGGTGGCGGTGTGA...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCTCACACCGCCACCGCTaGAGGACTTCAGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFSHRHR*RTSAQV
Trigger: CACCTGTGCTGAAGTCCTGCAGCGGTGGCGGTGTGA...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR GCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTCTGCCCTGCATGCTCTaGGCTCTGGCCAGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSLPCML*ALARRH
Trigger: ATGCCTTCTGGCCAGAGCGCAGAGCATGCAGGGCAG...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp CCATACCAAAGCAGAGGGCAGACAACCTGTTTTAAAGCAGAAGAGTGTGTTTGGCAAATATCTCTGCCCTaGATGCTCTGCGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PYQSRGQTTCFKAEECVWQISLP*MLCALA
Trigger: GGCCAGAGCGCAGAGCATGCAGGGCAGAGATATTTG...CCAAACACACTCTTCTGCTTTAAAACAGGTTGTCTGCCCTCTGCTTTGGTATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCAGTGGTTTGGAGCTGTaGTTGAGTGCTGAAGAATCC +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVSGLEL*LSAEES
Trigger: GGATTCTTCAGCACTCAACCACAGCTCCAAACCACT...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAGGGGCCATGGGAAGTaGTTTGGAGCTGTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIRGHGK*FGAVVE
Trigger: CTCAACCACAGCTCCAAACCACTTCCCATGGCCCCT...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATACTCTGGAATTCCCTCTaGGAGCTTCCCTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQILWNSL*ELPWAH
Trigger: ATGTGCCCAGGGAAGCTCCCAGAGGGAATTCCAGAG...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372010.5
CDS-3UTR CCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCCTGCTGGTGAAGCAATaGATTCAACCACAGAACGAG +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVLLVKQ*IQPQNE
Trigger: CTCGTTCTGTGGTTGAATCCATTGCTTCACCAGCAG...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACGCTGCAAAAGCTCCTTaGCAGATCCTCGCCTATCCA +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYAAKAP*QILAYP
Trigger: TGGATAGGCGAGGATCTGCCAAGGAGCTTTTGCAGC...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTGCTGCAAAAGCTCCTTaGCAGATCCTCGCCTATCCA +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTAAKAP*QILAYP
Trigger: TGGATAGGCGAGGATCTGCCAAGGAGCTTTTGCAGC...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTCATTGCTGCCCTGTTTaGGCTGCGATTCAGGCTTAC +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTHCCPV*AAIQAY
Trigger: GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATG...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACGAGGGGATTCACTACTaGCTCTTTCGCTTCACGGTG +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYEGIHY*LFRFTV
Trigger: CACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCCTC...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCTCTAGAATCTGGAACTaGATTCTGCCACGGATCCAG +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVSRIWN*ILPRIQ
Trigger: CTGGATCCGTGGCAGAATCCAGTTCCAGATTCTAGA...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCAGACAGCCATACACTTaGCCTGGATTTGAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVRQPYT*PGFESA
Trigger: TGCAGACTCAAATCCAGGCCAAGTGTATGGCTGTCT...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATGAGAAGGGTCCGGGCTaGCTTCAGCTCCTACAGACT +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINEKGPG*LQLLQT
Trigger: AGTCTGTAGGAGCTGAAGCCAGCCCGGACCCTTCTC...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ACTCAGGACATTTTGGAATCAACATTGAAAGATGTGCCCTCGTTATCTCAGGGCGGACTTCAGCACAGGTaGGCACTGCCCATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: TQDILESTLKDVPSLSQGGLQHR*ALPMRR
Trigger: CCTTCTCATGGGCAGTGCCCACCTGTGCTGAAGTCC...GCCCTGAGATAACGAGGGCACATCTTTCAATGTTGATTCCAAAATGTCCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp CTCCTCCTGGCTGATGTACTGAGATTAAAAACTCAATGCATTAGTAGCTACAGGGCACTCAGGGCTGGTTaGCACTCTGCTGTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLLADVLRLKTQCISSYRALRAG*HSAVGR
Trigger: CCTGCCTACAGCAGAGTGCCAACCAGCCCTGAGTGC...CCTGTAGCTACTAATGCATTGAGTTTTTAATCTCAGTACATCAGCCAGGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGGATGCGCGCGCGTCTaGGTGTGTGAGAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIGCARV*VCESIW
Trigger: CCAGATGCTCTCACACACCCAGACGCGCGCGCATCC...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425146.5
ENST00000446737.5
CDS-3UTR TCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACGCTGTGGTTGAGTGCTaGAGAATCCCGGTTGTTACT +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYAVVEC*RIPVVT
Trigger: AGTAACAACCGGGATTCTTCAGCACTCAACCACAGC...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAGTTTGGAGCTGTGGTTaGGTGCTGAAGAATCCCGGT +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIVWSCG*VLKNPG
Trigger: ACCGGGATTCTTCAGCACTCAACCACAGCTCCAAAC...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATACCATACAGGTCTCTGTaGCCACATCAGTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIPYRSL*PHQSES
Trigger: GCTCTCTGACTGATGTGGTCACAGAGACCTGTATGG...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACGTCACGGAATACAGCTaGCAGTCTCTCAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYVTEYS*QSLRIL
Trigger: CAGAATCCTGAGAGACTGTCAGCTGTATTCCGTGAC...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTGCTTCACGGTGGAAGTaGCCACTTTATGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTASRWK*PLYGHF
Trigger: GAAGTGACCATAAAGTGGTCACTTCCACCGTGAAGC...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTAGTAATCGTGCCCATTaGTCTGGAATTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTSNRAH*SGIPSG
Trigger: CCCAGAGGGAATTCCAGAGCAATGGGCACGATTACT...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372010.5
CDS-3UTR GCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCCAATGGAGGCTCAGATaGTGTTTTTGTACTCGAAGG +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVQWRLR*CFCTRR
Trigger: CCTTCGAGTACAAAAACAGCATCTGAGCCTCCATTG...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATACTTGCAGGCACTCTCTaGAGACAGCTGCTATCTGTC +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQILAGTL*RQLLSV
Trigger: GACAGATAGCAGCTGTCTGCAGAGAGTGCCTGCAAG...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAGTGAGGTGTAAGGCTTaGAGTCTTAGCGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIVRCKA*SLSGCC
Trigger: ACAGCAGCCGCTAAGACTGCAAGCCTTACACCTCAC...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACGAAACCTTTACACCTTaGTCATCCCAGAACAGGGCC +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYETFTP*SSQNRA
Trigger: GGCCCTGTTCTGGGATGAGCAAGGTGTAAAGGTTTC...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACATGCAAGGACTCAGCTaGTCTTTCTTGGGGGAAACC +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYMQGLS*SFLGET
Trigger: GGTTTCCCCCAAGAAAGAGCAGCTGAGTCCTTGCAT...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TCCCAGGCCCATCAAACTGTCAGTTTACAAATGCTGAATTTCAGTCCTCTTGTTGCTGGGCACACCAGCTaGCACAAGATGCAAGGACTC +
Preference number: 4 (lower is better)
Translates to: SQAHQTVSLQMLNFSPLVAGHTS*HKMQGL
Trigger: GAGTCCTTGCATCTTGTGGCAGCTGGTGTGCCCAGC...AACAAGAGGACTGAAATTCAGCATTTGTAAACTGACAGTTTGATGGGCCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTCTCCTACAGACTCAGTaGTGGGCACACCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSLLQTQ*WAHQLP
Trigger: TGGCAGCTGGTGTGCCCAGCACTGAGTCTGTAGGAG...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCCTCCTACAGACTCAGTaGTGGGCACACCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFLLQTQ*WAHQLP
Trigger: TGGCAGCTGGTGTGCCCAGCACTGAGTCTGTAGGAG...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ACTCAGGACATTTTGGAATCAACATTGAAAGATGTGCCCTCGTTATCTCAGGGCTATCTCTGCCCTGCATaGTCTGCGCTCTGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: TQDILESTLKDVPSLSQGYLCPA*SALWPE
Trigger: TTCTGGCCAGAGCGCAGAGCATGCAGGGCAGAGATA...GCCCTGAGATAACGAGGGCACATCTTTCAATGTTGATTCCAAAATGTCCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAGGGGCCATGGGAAGTaGTTTGGAGCTGTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCRGHGK*FGAVVE
Trigger: CTCAACCACAGCTCCAAACCACTTCCCATGGCCCCT...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACTTTATCCCCTCCTCCTaGGAAGATAGAGCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYFIPSS*EDRAKP
Trigger: AGGCTTCGCTCTATCTTCCCAGGAGGAGGGGATAAA...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCTCTTGGTGCGATAACTaGTGGTGGCTCATTTTCATC +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVSWCDN*WWLIFI
Trigger: GATGAAAATGAGCCACCACCAGTTATCGCACCAAGA...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCTCTCTATGGATCACCTaGTTTGAGTGCAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVSLWIT*FECRKS
Trigger: GGATTTCCTGCACTCAAACCAGGTGATCCATAGAGA...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTTCAGAGGAGTCAGGCTaGAGAGAGGCTTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTSEESG*REAWLI
Trigger: AATTAGCCAAGCCTCTCTCCAGCCTGACTCCTCTGA...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATACATTGCTGCCCTGTTTaGGCTGCGATTCAGGCTTAC +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIHCCPV*AAIQAY
Trigger: GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATG...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACGGAGCAAGACTAACATaGCCTTCTCTCCTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYGARLT*PSLLRF
Trigger: GAAGCGAAGGAGAGAAGGCCATGTTAGTCTTGCTCC...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCTGTCACCAACAGGAATaGACCTCCTTCTGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVCHQQE*TSFCSN
Trigger: ATTGGAACAGAAGGAGGTCCATTCCTGTTGGTGACA...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACTCGTGCCCATTGCTCTaGAATTCCAGTGAATTCCCC +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYSCPLL*NSSEFP
Trigger: GGGGAATTCACTGGAATTCCAGAGCAATGGGCACGA...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000425146.5
ENST00000446737.5
CDS-3UTR CCA 90 bp TCCCAGGCCCATCAAACTGTCAGTTTACAAATGCTGAATTTCAGTCCTCTTGTTGCATGCTCTGCGCTCTaGCCAGAAGGCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SQAHQTVSLQMLNFSPLVACSAL*PEGICF
Trigger: GAAGCAGATGCCTTCTGGCCAGAGCGCAGAGCATGC...AACAAGAGGACTGAAATTCAGCATTTGTAAACTGACAGTTTGATGGGCCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATGTTTGGAGCTGTGGTTaGGTGCTGAAGAATCCCGGT +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINVWSCG*VLKNPG
Trigger: ACCGGGATTCTTCAGCACTCAACCACAGCTCCAAAC...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTCCCTGGGCACATCTGTaGGCCATAGAGATCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSPWAHL*AIEIWS
Trigger: ACTCCAGATCTCTATGGCTCACAGATGTGCCCAGGG...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262836.6
ENST00000372010.5
CDS-3UTR TCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACATGGATCACCTGGTTTaGGTGCAGGAAATCCAAAGC +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYMDHLV*VQEIQS
Trigger: GCTTTGGATTTCCTGCACTCAAACCAGGTGATCCAT...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAGCTTCACGGTGGAAGTaGCCACTTTATGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIASRWK*PLYGHF
Trigger: GAAGTGACCATAAAGTGGTCACTTCCACCGTGAAGC...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACAAACACAACACTATaGAGAGGGAGTGTGCATCTT +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVTNTTL*RGSVHL
Trigger: AAGATGCACACTCCCTCTTCATAGTGTTGTGTTTGT...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCTTGGGTAAGGAGTTTTaGAGGAGGTTTGAATGCAAG +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVLGKEF*RRFECK
Trigger: CTTGCATTCAAACCTCCTTCAAAACTCCTTACCCAA...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTCTGCCTACAGTGATCTaGAGGGTCACTGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSLPTVI*RVTAPR
Trigger: CCTTGGAGCAGTGACCCTTCAGATCACTGTAGGCAG...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCTTCAGAATTGTGTGCTaGGTTCACTTCAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVFRIVC*VHFKSQ
Trigger: CTGGGATTTGAAGTGAACTCAGCACACAATTCTGAA...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACCTGGCTCCTCCTGGCTaGTGTACTGAGATTAAAAAC +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYLAPPG*CTEIKN
Trigger: GTTTTTAATCTCAGTACATCAGCCAGGAGGAGCCAG...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTGAATTCCCCGGTGACTaGATCAAACCCCACATGAAT +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTEFPGD*IKPHMN
Trigger: ATTCATGTGGGGTTTGATGCAGTCACCGGGGAATTC...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACGAATTCCCCGGTGACTaGATCAAACCCCACATGAAT +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYEFPGD*IKPHMN
Trigger: ATTCATGTGGGGTTTGATGCAGTCACCGGGGAATTC...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTACTCGAAGGATGGGCTaGTATGTATCCATGTGCACT +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTTRRMG*YVSMCT
Trigger: AGTGCACATGGATACATAGCAGCCCATCCTTCGAGT...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGATGCTCTGGTCTTGGTaGGATAACTGGTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREMLWSW*DNWWWL
Trigger: GAGCCACCACCAGTTATCGCACCAAGACCAGAGCAT...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATATGCTCTGGTCTTGGTaGGATAACTGGTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINMLWSW*DNWWWL
Trigger: GAGCCACCACCAGTTATCGCACCAAGACCAGAGCAT...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCCCCCAACACTCACAATaGTTCTTAGCTTCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVPQHSQ*FLASLR
Trigger: TCTTAGAGAAGCTAAGAAGCATTGTGAGTGTTGGGG...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTCTCTCTGCAGACAGCTaGTATCTGTCCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTLSADS*YLSFIH
Trigger: ATGGATGAAGGACAGATAGCAGCTGTCTGCAGAGAG...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACCTCTCTGCAGACAGCTaGTATCTGTCCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYLSADS*YLSFIH
Trigger: ATGGATGAAGGACAGATAGCAGCTGTCTGCAGAGAG...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTCTTGCAGGCACTCTCTaGAGACAGCTGCTATCTGTC +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCLAGTL*RQLLSV
Trigger: GACAGATAGCAGCTGTCTGCAGAGAGTGCCTGCAAG...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTAGGAAATCCAAAGCTTaGAGGCACTCTCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTRKSKA*RHSLQT
Trigger: TGTCTGCAGAGAGTGCCTGCAAGCTTTGGATTTCCT...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAGGAAATCCAAAGCTTaGAGGCACTCTCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYRKSKA*RHSLQT
Trigger: TGTCTGCAGAGAGTGCCTGCAAGCTTTGGATTTCCT...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACGTGCTTCGTTTACTTTaGTCAGGAGTGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYVLRLL*SGVIWA
Trigger: TGCCCAGATCACTCCTGAGCAAAGTAAACGAAGCAC...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTGTGCTTCGTTTACTTTaGTCAGGAGTGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTVLRLL*SGVIWA
Trigger: TGCCCAGATCACTCCTGAGCAAAGTAAACGAAGCAC...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTGTGAGGTGTAAGGCTTaGAGTCTTAGCGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCVRCKA*SLSGCC
Trigger: ACAGCAGCCGCTAAGACTGCAAGCCTTACACCTCAC...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACTCACTTCAACATTGCTaGCCTGTTTGGGCTGCGATT +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYSLQHC*PVWAAI
Trigger: AATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGA...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGTGGTCACTTCAACATTaGTGCCCTGTTTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREWSLQH*CPVWAA
Trigger: CGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCA...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTTGGTCACTTCAACATTaGTGCCCTGTTTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCWSLQH*CPVWAA
Trigger: CGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCA...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAATGCAAGGACTCAGCTaGTCTTTCTTGGGGGAAACC +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIMQGLS*SFLGET
Trigger: GGTTTCCCCCAAGAAAGAGCAGCTGAGTCCTTGCAT...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATACTCCTACAGACTCAGTaGTGGGCACACCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYILLQTQ*WAHQLP
Trigger: TGGCAGCTGGTGTGCCCAGCACTGAGTCTGTAGGAG...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCAGTAATCGTGCCCATTaGTCTGGAATTCCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVSNRAH*SGIPVN
Trigger: ATTCACTGGAATTCCAGAGCAATGGGCACGATTACT...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000425146.5
ENST00000446737.5
CDS-3UTR CCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATACTATTCATCCTCAGTaGAGGAGCCGGGGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINTIHPQ*RSRGFL
Trigger: GAGAAACCCCCGGCTCCTCCACTGAGGATGAATAGT...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTACTATTCATCCTCAGTaGAGGAGCCGGGGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCTIHPQ*RSRGFL
Trigger: GAGAAACCCCCGGCTCCTCCACTGAGGATGAATAGT...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCCCAGGCCCATCAAACTGTCAGTTTACAAATGCTGAATTTCAGTCCTCTTGTTAGGGGCCATGGGAAGTaGTTTGGAGCTGTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: SQAHQTVSLQMLNFSPLVRGHGK*FGAVVE
Trigger: CTCAACCACAGCTCCAAACCACTTCCCATGGCCCCT...AACAAGAGGACTGAAATTCAGCATTTGTAAACTGACAGTTTGATGGGCCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCTCTCCTTCTTCTTATTaGTTTTATCCCCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVSPSSY*FYPLLL
Trigger: CAGGAGGAGGGGATAAAACCAATAAGAAGAAGGAGA...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCGTTATGTTGGAAGTTTaGAGTAATCGTGCCCATTGC +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVVMLEV*SNRAHC
Trigger: GCAATGGGCACGATTACTCCAAACTTCCAACATAAC...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTGGTTCATCTGCTTTATaGCCACCTCTTGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTGSSAL*PPLVLL
Trigger: CAACAGGACAAGAGGTGGCCATAAAGCAGATGAACC...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACGGTTCATCTGCTTTATaGCCACCTCTTGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYGSSAL*PPLVLL
Trigger: CAACAGGACAAGAGGTGGCCATAAAGCAGATGAACC...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTGCTGCAAAAGCTCCTTaGCAGATCCTCGCCTATCCA +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCAAKAP*QILAYP
Trigger: TGGATAGGCGAGGATCTGCCAAGGAGCTTTTGCAGC...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATATCAGAGGAGTCAGGCTaGAGAGAGGCTTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQISEESG*REAWLI
Trigger: AATTAGCCAAGCCTCTCTCCAGCCTGACTCCTCTGA...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGCATTGCTGCCCTGTTTaGGCTGCGATTCAGGCTTAC +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREHCCPV*AAIQAY
Trigger: GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATG...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCGAAGTGACCACTTTATaGTCACTTCAACATTGCTGC +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVEVTTL*SLQHCC
Trigger: GCAGCAATGTTGAAGTGACCATAAAGTGGTCACTTC...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGGAGGGGATTCACTACTaGCTCTTTCGCTTCACGGTG +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREEGIHY*LFRFTV
Trigger: CACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCCTC...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTGAGGGGATTCACTACTaGCTCTTTCGCTTCACGGTG +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCEGIHY*LFRFTV
Trigger: CACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCCTC...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATGAGGGGATTCACTACTaGCTCTTTCGCTTCACGGTG +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINEGIHY*LFRFTV
Trigger: CACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCCTC...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAGGAGCAAGACTAACATaGCCTTCTCTCCTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIGARLT*PSLLRF
Trigger: GAAGCGAAGGAGAGAAGGCCATGTTAGTCTTGCTCC...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTAGACAGCCATACACTTaGCCTGGATTTGAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTRQPYT*PGFESA
Trigger: TGCAGACTCAAATCCAGGCCAAGTGTATGGCTGTCT...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGAGAAGGGTCCGGGCTaGCTTCAGCTCCTACAGACT +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIEKGPG*LQLLQT
Trigger: AGTCTGTAGGAGCTGAAGCCAGCCCGGACCCTTCTC...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATATCGTGCCCATTGCTCTaGAATTCCAGTGAATTCCCC +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQISCPLL*NSSEFP
Trigger: GGGGAATTCACTGGAATTCCAGAGCAATGGGCACGA...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000425146.5
ENST00000446737.5
CDS-3UTR CCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCGAGCCAAATATTGATTaGGATGTAGCCTTCACTGAC +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVEPNID*DVAFTD
Trigger: GTCAGTGAAGGCTACATCCCAATCAATATTTGGCTC...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp GCAGGGCATTGGGACCATCCACTAACTCCCAGTTTACCCTCTTTCCAGCAGTGTTTACTGCTGGTATTATaGGATAGCATTTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: AGHWDHPLTPSLPSFQQCLLLVL*DSICLM
Trigger: CATCAGGCAAATGCTATCCCATAATACCAGCAGTAA...ACACTGCTGGAAAGAGGGTAAACTGGGAGTTAGTGGATGGTCCCAATGCCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGTTCCAGCCTCTTCTTaGTCAGAGCGAAGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIVPASS*SERRRA
Trigger: CGCCCTCCTTCGCTCTGACCAAGAAGAGGCTGGAAC...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425146.5
ENST00000446737.5
CDS-3UTR TCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGGCTGTGGTTGAGTGCTaGAGAATCCCGGTTGTTACT +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREAVVEC*RIPVVT
Trigger: AGTAACAACCGGGATTCTTCAGCACTCAACCACAGC...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTATTTGGTACTGCTGGTaGAGCAATGGATTCAACCAC +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTIWYCW*SNGFNH
Trigger: GTGGTTGAATCCATTGCTTCACCAGCAGTACCAAAT...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACATTTGGTACTGCTGGTaGAGCAATGGATTCAACCAC +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYIWYCW*SNGFNH
Trigger: GTGGTTGAATCCATTGCTTCACCAGCAGTACCAAAT...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTCAGCAGAGGGTGGTGTaGCCTCTTTATTTGGTACTG +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCQQRVV*PLYLVL
Trigger: CAGTACCAAATAAAGAGGTCACACCACCCTCTGCTG...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATCAGCAGAGGGTGGTGTaGCCTCTTTATTTGGTACTG +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINQQRVV*PLYLVL
Trigger: CAGTACCAAATAAAGAGGTCACACCACCCTCTGCTG...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCCCATACAGGTCTCTGTaGCCACATCAGTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFPYRSL*PHQSES
Trigger: GCTCTCTGACTGATGTGGTCACAGAGACCTGTATGG...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTCCATACAGGTCTCTGTaGCCACATCAGTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSPYRSL*PHQSES
Trigger: GCTCTCTGACTGATGTGGTCACAGAGACCTGTATGG...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATGTCACGGAATACAGCTaGCAGTCTCTCAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINVTEYS*QSLRIL
Trigger: CAGAATCCTGAGAGACTGTCAGCTGTATTCCGTGAC...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTGCTTCACGGTGGAAGTaGCCACTTTATGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCASRWK*PLYGHF
Trigger: GAAGTGACCATAAAGTGGTCACTTCCACCGTGAAGC...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTAGTGAATGCACAAAATaGGGGGATTCACTACTGGCT +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTSECTK*GDSLLA
Trigger: AGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACT...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAGTGAATGCACAAAATaGGGGGATTCACTACTGGCT +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYSECTK*GDSLLA
Trigger: AGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACT...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCGGGAGTGTGCATCTTTaGGAAACCTTTTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVGSVHL*ETFFFK
Trigger: TTTGAAGAAAAAGGTTTCTCAAAGATGCACACTCCC...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATACCCTGGGCACATCTGTaGGCCATAGAGATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIPWAHL*AIEIWH
Trigger: ATGCCAGATCTCTATGGCTCACAGATGTGCCCAGGG...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360648.8
CDS-3UTR TCA 90 bp CTCCTCCTGGCTGATGTACTGAGATTAAAAACTCAATGCATTAGTAGCTACAGGCACTTGGCCTGGATTTaGGTCCTTCTCTCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: LLLADVLRLKTQCISSYRHLAWI*VLLSFA
Trigger: AGCGAAGGAGAGAAGGACTCAAATCCAGGCCAAGTG...CCTGTAGCTACTAATGCATTGAGTTTTTAATCTCAGTACATCAGCCAGGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp CCATACCAAAGCAGAGGGCAGACAACCTGTTTTAAAGCAGAAGAGTGTGTTTGGATCCTCATGGGATTATaGCAACGCACTGGATCCTTG +
Preference number: 4 (lower is better)
Translates to: PYQSRGQTTCFKAEECVWILMGL*QRTGSL
Trigger: CAAGGATCCAGTGCGTTGTCATAATCCCATGAGGAT...CCAAACACACTCTTCTGCTTTAAAACAGGTTGTCTGCCCTCTGCTTTGGTATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATGGGATAGCATTTGCCTaGTGGCAGCTTCTAAAGGAG +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINGIAFA*WQLLKE
Trigger: CTCCTTTAGAAGCTGCCATCAGGCAAATGCTATCCC...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATGGCGAACTGAACTTCTaGCTCCTCAGAAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINGELNF*LLRRES
Trigger: GCTTTCTCTTCTGAGGAGTCAGAAGTTCAGTTCGCC...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446737.5
CDS-3UTR GCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATAGTAATCGTGCCCATTaGTCTGGAATTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINSNRAH*SGIPSG
Trigger: CCCAGAGGGAATTCCAGAGCAATGGGCACGATTACT...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372010.5
CDS-3UTR GCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAACTCGAAGGATGGGCTaGTATGTATCCATGTGCACT +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQITRRMG*YVSMCT
Trigger: AGTGCACATGGATACATAGCAGCCCATCCTTCGAGT...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTCAATGGAGGCTCAGATaGTGTTTTTGTACTCGAAGG +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTQWRLR*CFCTRR
Trigger: CCTTCGAGTACAAAAACAGCATCTGAGCCTCCATTG...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACCAATGGAGGCTCAGATaGTGTTTTTGTACTCGAAGG +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYQWRLR*CFCTRR
Trigger: CCTTCGAGTACAAAAACAGCATCTGAGCCTCCATTG...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp CTCCTCCTGGCTGATGTACTGAGATTAAAAACTCAATGCATTAGTAGCTACAGGATGCTCTGGTCTTGGTaGGATAACTGGTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LLLADVLRLKTQCISSYRMLWSW*DNWWWL
Trigger: GAGCCACCACCAGTTATCGCACCAAGACCAGAGCAT...CCTGTAGCTACTAATGCATTGAGTTTTTAATCTCAGTACATCAGCCAGGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCCTTGCAGGCACTCTCTaGAGACAGCTGCTATCTGTC +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFLAGTL*RQLLSV
Trigger: GACAGATAGCAGCTGTCTGCAGAGAGTGCCTGCAAG...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAGGAAATCCAAAGCTTaGAGGCACTCTCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIRKSKA*RHSLQT
Trigger: TGTCTGCAGAGAGTGCCTGCAAGCTTTGGATTTCCT...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACATCACCTGGTTTGAGTaGAGGAAATCCAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYITWFE*RKSKAC
Trigger: GCAAGCTTTGGATTTCCTGCACTCAAACCAGGTGAT...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAGTGCTTCGTTTACTTTaGTCAGGAGTGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIVLRLL*SGVIWA
Trigger: TGCCCAGATCACTCCTGAGCAAAGTAAACGAAGCAC...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCGCTGCTGTTCTTAATTaGTTCCTTTGCAGCGATAAT +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVAAVLN*FLCSDN
Trigger: ATTATCGCTGCAAAGGAAGCAATTAAGAACAGCAGC...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCTGGTCACTTCAACATTaGTGCCCTGTTTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFWSLQH*CPVWAA
Trigger: CGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCA...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTTGGTCACTTCAACATTaGTGCCCTGTTTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSWSLQH*CPVWAA
Trigger: CGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCA...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GCAGGGCATTGGGACCATCCACTAACTCCCAGTTTACCCTCTTTCCAGCAGTGTTATGAAGAGGGAGTGTaGATCTTTGAGAAACCTTTT +
Preference number: 4 (lower is better)
Translates to: AGHWDHPLTPSLPSFQQCYEEGV*IFEKPF
Trigger: AAAAGGTTTCTCAAAGATGCACACTCCCTCTTCATA...ACACTGCTGGAAAGAGGGTAAACTGGGAGTTAGTGGATGGTCCCAATGCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp ACTCAGGACATTTTGGAATCAACATTGAAAGATGTGCCCTCGTTATCTCAGGGCAAACAGACACCCGAATaGCATACCAAAGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: TQDILESTLKDVPSLSQGKQTPE*HTKAEG
Trigger: GCCCTCTGCTTTGGTATGGCATTCGGGTGTCTGTTT...GCCCTGAGATAACGAGGGCACATCTTTCAATGTTGATTCCAAAATGTCCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp AACAGAACTATAACTGAATGCCAACAGGCAGAGACAGTCCTACATATTTGTTTAGGCTGGTTGGCACTCTaGTGTAGGCAGGGCATTGGG +
Preference number: 4 (lower is better)
Translates to: NRTITECQQAETVLHICLGWLAL*CRQGIG
Trigger: CCCAATGCCCTGCCTACAGCAGAGTGCCAACCAGCC...TAAACAAATATGTAGGACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCACTATTCATCCTCAGTaGAGGAGCCGGGGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFTIHPQ*RSRGFL
Trigger: GAGAAACCCCCGGCTCCTCCACTGAGGATGAATAGT...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTACTATTCATCCTCAGTaGAGGAGCCGGGGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSTIHPQ*RSRGFL
Trigger: GAGAAACCCCCGGCTCCTCCACTGAGGATGAATAGT...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp CCATACCAAAGCAGAGGGCAGACAACCTGTTTTAAAGCAGAAGAGTGTGTTTGGAGTGGTTTGGAGCTGTaGTTGAGTGCTGAAGAATCC +
Preference number: 4 (lower is better)
Translates to: PYQSRGQTTCFKAEECVWSGLEL*LSAEES
Trigger: GGATTCTTCAGCACTCAACCACAGCTCCAAACCACT...CCAAACACACTCTTCTGCTTTAAAACAGGTTGTCTGCCCTCTGCTTTGGTATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGGGGCCATGGGAAGTaGTTTGGAGCTGTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHRGHGK*FGAVVE
Trigger: CTCAACCACAGCTCCAAACCACTTCCCATGGCCCCT...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTTTATCCCCTCCTCCTaGGAAGATAGAGCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINFIPSS*EDRAKP
Trigger: AGGCTTCGCTCTATCTTCCCAGGAGGAGGGGATAAA...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATACTCTGGAATTCCCTCTaGGAGCTTCCCTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYILWNSL*ELPWAH
Trigger: ATGTGCCCAGGGAAGCTCCCAGAGGGAATTCCAGAG...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372010.5
CDS-3UTR CCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTTGGTGCGATAACTGGTaGTGGCTCATTTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTWCDNW*WLIFIF
Trigger: GAAGATGAAAATGAGCCACCACCAGTTATCGCACCA...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACTCTTGGTGCGATAACTaGTGGTGGCTCATTTTCATC +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYSWCDN*WWLIFI
Trigger: GATGAAAATGAGCCACCACCAGTTATCGCACCAAGA...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATACTGCTGGTGAAGCAATaGATTCAACCACAGAACGAG +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQILLVKQ*IQPQNE
Trigger: CTCGTTCTGTGGTTGAATCCATTGCTTCACCAGCAG...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACTCTCTATGGATCACCTaGTTTGAGTGCAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYSLWIT*FECRKS
Trigger: GGATTTCCTGCACTCAAACCAGGTGATCCATAGAGA...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTTGCTCAGGAGTGATCTaGGCACAGAACCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCCSGVI*AQNPKS
Trigger: TGACTTTGGGTTCTGTGCCCAGATCACTCCTGAGCA...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGTGCTCAGGAGTGATCTaGGCACAGAACCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLRECSGVI*AQNPKS
Trigger: TGACTTTGGGTTCTGTGCCCAGATCACTCCTGAGCA...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp CTCCTCCTGGCTGATGTACTGAGATTAAAAACTCAATGCATTAGTAGCTACAGGGCTGCAAAAGCTCCTTaGCAGATCCTCGCCTATCCA +
Preference number: 4 (lower is better)
Translates to: LLLADVLRLKTQCISSYRAAKAP*QILAYP
Trigger: TGGATAGGCGAGGATCTGCCAAGGAGCTTTTGCAGC...CCTGTAGCTACTAATGCATTGAGTTTTTAATCTCAGTACATCAGCCAGGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTGAGGGGATTCACTACTaGCTCTTTCGCTTCACGGTG +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSEGIHY*LFRFTV
Trigger: CACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCCTC...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTTCAGCTGCTCTTTCTTaGGGGAAACCTTTACACCTT +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTSAALS*GKPLHL
Trigger: AAGGTGTAAAGGTTTCCCCCAAGAAAGAGCAGCTGA...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGTGGATGGATGTACCTTaGCAAAGAAGGAGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREWMDVP*QRRREA
Trigger: GGCCTCTCTCCTTCTTTGCCAAGGTACATCCATCCA...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTTTTTGCACTCAGGGCTaGTTGGCACTCTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSFCTQG*LALCCR
Trigger: CCTACAGCAGAGTGCCAACCAGCCCTGAGTGCAAAA...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CAA 72 bp CATAAAGCACACCACACACAAGCACACACATTGAACTaGAATTTTGCACTCAGGGCTGGTTGGCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: HKAHHTQAHTLN*NFALRAGWHSA
Trigger: AGCAGAGTGCCAACCAGCCCTGAGTGCAAAATTCAAGTTCAATGTGTGTGCTTGTGTGTGGTGTGCTTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGTTTGGAGCTGTGGTTaGGTGCTGAAGAATCCCGGT +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIVWSCG*VLKNPG
Trigger: ACCGGGATTCTTCAGCACTCAACCACAGCTCCAAAC...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATGTTTGGAGCTGTGGTTaGGTGCTGAAGAATCCCGGT +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHVWSCG*VLKNPG
Trigger: ACCGGGATTCTTCAGCACTCAACCACAGCTCCAAAC...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTCGTATGCTCAAAGTCTaGAGGAAGAGAGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCRMLKV*RKRDLW
Trigger: CCAGAGATCTCTCTTCCTTCAGACTTTGAGCATACG...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAGCATCAAACCCCACATaGATCGTATGCTCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIASNPT*IVCSKS
Trigger: AGACTTTGAGCATACGATTCATGTGGGGTTTGATGC...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCCAGCAGAGGGTGGTGTaGCCTCTTTATTTGGTACTG +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFQQRVV*PLYLVL
Trigger: CAGTACCAAATAAAGAGGTCACACCACCCTCTGCTG...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTATGGATCACCTGGTTTaGGTGCAGGAAATCCAAAGC +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCMDHLV*VQEIQS
Trigger: GCTTTGGATTTCCTGCACTCAAACCAGGTGATCCAT...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGATGGATCACCTGGTTTaGGTGCAGGAAATCCAAAGC +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREMDHLV*VQEIQS
Trigger: GCTTTGGATTTCCTGCACTCAAACCAGGTGATCCAT...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATATGGATCACCTGGTTTaGGTGCAGGAAATCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINMDHLV*VQEIQS
Trigger: GCTTTGGATTTCCTGCACTCAAACCAGGTGATCCAT...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTGTCACGGAATACAGCTaGCAGTCTCTCAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSVTEYS*QSLRIL
Trigger: CAGAATCCTGAGAGACTGTCAGCTGTATTCCGTGAC...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCGTCACGGAATACAGCTaGCAGTCTCTCAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFVTEYS*QSLRIL
Trigger: CAGAATCCTGAGAGACTGTCAGCTGTATTCCGTGAC...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTGCTTCACGGTGGAAGTaGCCACTTTATGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSASRWK*PLYGHF
Trigger: GAAGTGACCATAAAGTGGTCACTTCCACCGTGAAGC...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAGTGAATGCACAAAATaGGGGGATTCACTACTGGCT +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQISECTK*GDSLLA
Trigger: AGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACT...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTACAAACACAACACTATaGAGAGGGAGTGTGCATCTT +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTTNTTL*RGSVHL
Trigger: AAGATGCACACTCCCTCTTCATAGTGTTGTGTTTGT...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCCACTTGGCCTGGATTTaGGTCTGCAAAACCATGAGG +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFHLAWI*VCKTMR
Trigger: CCTCATGGTTTTGCAGACTCAAATCCAGGCCAAGTG...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372010.5
ENST00000519681.5
CDS-3UTR TCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTGTGTGCACATGGAGGTaGTATCTCAGTTCCCGCATT +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSVCTWR*YLSSRI
Trigger: AATGCGGGAACTGAGATATCACCTCCATGTGCACAC...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCCTATCTTGTGCCACTTaGGAATTAAACTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVLSCAT*ELNSRK
Trigger: CTTTCTAGAGTTTAATTCTCAAGTGGCACAAGATAG...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATACTCGAAGGATGGGCTaGTATGTATCCATGTGCACT +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINTRRMG*YVSMCT
Trigger: AGTGCACATGGATACATAGCAGCCCATCCTTCGAGT...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATGCTCTGGTCTTGGTaGGATAACTGGTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIMLWSW*DNWWWL
Trigger: GAGCCACCACCAGTTATCGCACCAAGACCAGAGCAT...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTCCCCAACACTCACAATaGTTCTTAGCTTCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTPQHSQ*FLASLR
Trigger: TCTTAGAGAAGCTAAGAAGCATTGTGAGTGTTGGGG...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGCTCTCTGCAGACAGCTaGTATCTGTCCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLRELSADS*YLSFIH
Trigger: ATGGATGAAGGACAGATAGCAGCTGTCTGCAGAGAG...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATCTCTCTGCAGACAGCTaGTATCTGTCCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINLSADS*YLSFIH
Trigger: ATGGATGAAGGACAGATAGCAGCTGTCTGCAGAGAG...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATCTTGCAGGCACTCTCTaGAGACAGCTGCTATCTGTC +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHLAGTL*RQLLSV
Trigger: GACAGATAGCAGCTGTCTGCAGAGAGTGCCTGCAAG...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGAGGAAATCCAAAGCTTaGAGGCACTCTCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLRERKSKA*RHSLQT
Trigger: TGTCTGCAGAGAGTGCCTGCAAGCTTTGGATTTCCT...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGGTGCTTCGTTTACTTTaGTCAGGAGTGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREVLRLL*SGVIWA
Trigger: TGCCCAGATCACTCCTGAGCAAAGTAAACGAAGCAC...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTGTGCTTCGTTTACTTTaGTCAGGAGTGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCVLRLL*SGVIWA
Trigger: TGCCCAGATCACTCCTGAGCAAAGTAAACGAAGCAC...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCTTTAAAAATGGATGCTaGAAAAGCTCCTTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVFKNGC*KSSLAD
Trigger: ATCTGCCAAGGAGCTTTTGCAGCATCCATTTTTAAA...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGTGAGGTGTAAGGCTTaGAGTCTTAGCGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIVRCKA*SLSGCC
Trigger: ACAGCAGCCGCTAAGACTGCAAGCCTTACACCTCAC...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATGTGAGGTGTAAGGCTTaGAGTCTTAGCGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHVRCKA*SLSGCC
Trigger: ACAGCAGCCGCTAAGACTGCAAGCCTTACACCTCAC...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTCTGCCCTGTTTGGGCTaGGATTCAGGCTTACAAATA +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCLPCLG*DSGLQI
Trigger: TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAG...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATCTGCCCTGTTTGGGCTaGGATTCAGGCTTACAAATA +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINLPCLG*DSGLQI
Trigger: TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAG...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTCACTTCAACATTGCTaGCCTGTTTGGGCTGCGATT +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINSLQHC*PVWAAI
Trigger: AATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGA...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTTCACTTCAACATTGCTaGCCTGTTTGGGCTGCGATT +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCSLQHC*PVWAAI
Trigger: AATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGA...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATATGGTCACTTCAACATTaGTGCCCTGTTTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIWSLQH*CPVWAA
Trigger: CGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCA...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATTGGTCACTTCAACATTaGTGCCCTGTTTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHWSLQH*CPVWAA
Trigger: CGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCA...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCTATGAAGAGGGAGTGTaGATCTTTGAGAAACCTTTT +
Preference number: 4 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVYEEGV*IFEKPF
Trigger: AAAAGGTTTCTCAAAGATGCACACTCCCTCTTCATA...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTATGCAAGGACTCAGCTaGTCTTTCTTGGGGGAAACC +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSMQGLS*SFLGET
Trigger: GGTTTCCCCCAAGAAAGAGCAGCTGAGTCCTTGCAT...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATCCAGCTGCCACAAGATaGAAGGACTCAGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHPAATR*KDSAAL
Trigger: AAGAGCAGCTGAGTCCTTGCATCTTGTGGCAGCTGG...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTAGTAATCGTGCCCATTaGTCTGGAATTCCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTSNRAH*SGIPVN
Trigger: ATTCACTGGAATTCCAGAGCAATGGGCACGATTACT...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000425146.5
ENST00000446737.5
CDS-3UTR GCA 90 bp AACAATCTGGCGTTCAAGTTACTCGATTGTACCAAATGTGAATCCTTCAGCATCTTGCCGAGGCTGGAGTaGAATGGCATGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: NNLAFKLLDCTKCESFSILPRLE*NGMISA
Trigger: AGCTGAGATCATGCCATTGCACTCCAGCCTCGGCAA...GATGCTGAAGGATTCACATTTGGTACAATCGAGTAACTTGAACGCCAGATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGAGTGGTTTGGAGCTGTaGTTGAGTGCTGAAGAATCC +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLRESGLEL*LSAEES
Trigger: GGATTCTTCAGCACTCAACCACAGCTCCAAACCACT...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAGTGGTTTGGAGCTGTaGTTGAGTGCTGAAGAATCC +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCSGLEL*LSAEES
Trigger: GGATTCTTCAGCACTCAACCACAGCTCCAAACCACT...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCTTTATCCCCTCCTCCTaGGAAGATAGAGCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFFIPSS*EDRAKP
Trigger: AGGCTTCGCTCTATCTTCCCAGGAGGAGGGGATAAA...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTTTTATCCCCTCCTCCTaGGAAGATAGAGCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSFIPSS*EDRAKP
Trigger: AGGCTTCGCTCTATCTTCCCAGGAGGAGGGGATAAA...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACTCTCCTTCTTCTTATTaGTTTTATCCCCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYSPSSY*FYPLLL
Trigger: CAGGAGGAGGGGATAAAACCAATAAGAAGAAGGAGA...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTTCTCCTTCTTCTTATTaGTTTTATCCCCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTSPSSY*FYPLLL
Trigger: CAGGAGGAGGGGATAAAACCAATAAGAAGAAGGAGA...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTTTTGTACTCGAAGGATaGGCTGCTATGTATCCATGT +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTFVLEG*AAMYPC
Trigger: ACATGGATACATAGCAGCCCATCCTTCGAGTACAAA...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACTTTGTACTCGAAGGATaGGCTGCTATGTATCCATGT +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYFVLEG*AAMYPC
Trigger: ACATGGATACATAGCAGCCCATCCTTCGAGTACAAA...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACTGCGATAACTGGTGGTaGCTCATTTTCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYCDNWW*LIFIFF
Trigger: GAAGAAGATGAAAATGAGCCACCACCAGTTATCGCA...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTTGCGATAACTGGTGGTaGCTCATTTTCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTCDNWW*LIFIFF
Trigger: GAAGAAGATGAAAATGAGCCACCACCAGTTATCGCA...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATATCTTGGTGCGATAACTaGTGGTGGCTCATTTTCATC +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQISWCDN*WWLIFI
Trigger: GATGAAAATGAGCCACCACCAGTTATCGCACCAAGA...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTTGTATGCTCTGGTCTTaGTGCGATAACTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSCMLWS*CDNWWW
Trigger: CCACCACCAGTTATCGCACCAAGACCAGAGCATACA...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTCTGCTGGTGAAGCAATaGATTCAACCACAGAACGAG +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCLLVKQ*IQPQNE
Trigger: CTCGTTCTGTGGTTGAATCCATTGCTTCACCAGCAG...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACATTTTCAGCAGAGGGTaGTGTGACCTCTTTATTTGG +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYIFSRG*CDLFIW
Trigger: CCAAATAAAGAGGTCACACCACCCTCTGCTGAAAAT...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTGGTTCATCTGCTTTATaGCCACCTCTTGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCGSSAL*PPLVLL
Trigger: CAACAGGACAAGAGGTGGCCATAAAGCAGATGAACC...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTTGCTCAGGAGTGATCTaGGCACAGAACCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSCSGVI*AQNPKS
Trigger: TGACTTTGGGTTCTGTGCCCAGATCACTCCTGAGCA...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGCTGCAAAAGCTCCTTaGCAGATCCTCGCCTATCCA +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIAAKAP*QILAYP
Trigger: TGGATAGGCGAGGATCTGCCAAGGAGCTTTTGCAGC...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTTCAGAGGAGTCAGGCTaGAGAGAGGCTTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSSEESG*REAWLI
Trigger: AATTAGCCAAGCCTCTCTCCAGCCTGACTCCTCTGA...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCTCAGAGGAGTCAGGCTaGAGAGAGGCTTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFSEESG*REAWLI
Trigger: AATTAGCCAAGCCTCTCTCCAGCCTGACTCCTCTGA...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATCATTGCTGCCCTGTTTaGGCTGCGATTCAGGCTTAC +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHHCCPV*AAIQAY
Trigger: GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATG...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTGAAGTGACCACTTTATaGTCACTTCAACATTGCTGC +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTEVTTL*SLQHCC
Trigger: GCAGCAATGTTGAAGTGACCATAAAGTGGTCACTTC...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGAGGGGATTCACTACTaGCTCTTTCGCTTCACGGTG +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIEGIHY*LFRFTV
Trigger: CACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCCTC...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGTCTAGAATCTGGAACTaGATTCTGCCACGGATCCAG +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLRESRIWN*ILPRIQ
Trigger: CTGGATCCGTGGCAGAATCCAGTTCCAGATTCTAGA...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTCTCAAGTCTAGAATCTaGAACTGGATTCTGCCACGG +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCLKSRI*NWILPR
Trigger: CCGTGGCAGAATCCAGTTCCAGATTCTAGACTTGAG...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CCA 90 bp AACAGAACTATAACTGAATGCCAACAGGCAGAGACAGTCCTACATATTTGTTTAGAGAAGGGTCCGGGCTaGCTTCAGCTCCTACAGACT +
Preference number: 4 (lower is better)
Translates to: NRTITECQQAETVLHICLEKGPG*LQLLQT
Trigger: AGTCTGTAGGAGCTGAAGCCAGCCCGGACCCTTCTC...TAAACAAATATGTAGGACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTGGACTTCAGCACAGGTaGGCACTGCCCATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFGLQHR*ALPMRR
Trigger: CCTTCTCATGGGCAGTGCCCACCTGTGCTGAAGTCC...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ACTCAGGACATTTTGGAATCAACATTGAAAGATGTGCCCTCGTTATCTCAGGGCAGACAGCCATACACTTaGCCTGGATTTGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: TQDILESTLKDVPSLSQGRQPYT*PGFESF
Trigger: GAAGGACTCAAATCCAGGCCAAGTGTATGGCTGTCT...GCCCTGAGATAACGAGGGCACATCTTTCAATGTTGATTCCAAAATGTCCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCTTGGGCTCTCTCCACTaGCAGGACACAGTCACTAAT +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFLGSLH*QDTVTN
Trigger: ATTAGTGACTGTGTCCTGCCAGTGGAGAGAGCCCAA...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATTTCCTAACCAGGTATTaGGCTCTCTCCACTGGCAGG +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHFLTRY*ALSTGR
Trigger: CCTGCCAGTGGAGAGAGCCCAATACCTGGTTAGGAA...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TCCCAGGCCCATCAAACTGTCAGTTTACAAATGCTGAATTTCAGTCCTCTTGTTCTGAGGTCAGAAGGATaGAACCATACCATCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SQAHQTVSLQMLNFSPLVLRSEG*NHTISR
Trigger: CCTGCTGATGGTATGGTTCCATCCTTCTGACCTCAG...AACAAGAGGACTGAAATTCAGCATTTGTAAACTGACAGTTTGATGGGCCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATGCTGTGGTTGAGTGCTaGAGAATCCCGGTTGTTACT +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHAVVEC*RIPVVT
Trigger: AGTAACAACCGGGATTCTTCAGCACTCAACCACAGC...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTCGTATGCTCAAAGTCTaGAGGAAGAGAGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSRMLKV*RKRDLW
Trigger: CCAGAGATCTCTCTTCCTTCAGACTTTGAGCATACG...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCCGTATGCTCAAAGTCTaGAGGAAGAGAGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFRMLKV*RKRDLW
Trigger: CCAGAGATCTCTCTTCCTTCAGACTTTGAGCATACG...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGATTTGGTACTGCTGGTaGAGCAATGGATTCAACCAC +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREIWYCW*SNGFNH
Trigger: GTGGTTGAATCCATTGCTTCACCAGCAGTACCAAAT...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATATTTGGTACTGCTGGTaGAGCAATGGATTCAACCAC +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINIWYCW*SNGFNH
Trigger: GTGGTTGAATCCATTGCTTCACCAGCAGTACCAAAT...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTATTTGGTACTGCTGGTaGAGCAATGGATTCAACCAC +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCIWYCW*SNGFNH
Trigger: GTGGTTGAATCCATTGCTTCACCAGCAGTACCAAAT...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATACAGCAGAGGGTGGTGTaGCCTCTTTATTTGGTACTG +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIQQRVV*PLYLVL
Trigger: CAGTACCAAATAAAGAGGTCACACCACCCTCTGCTG...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATCAGCAGAGGGTGGTGTaGCCTCTTTATTTGGTACTG +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHQQRVV*PLYLVL
Trigger: CAGTACCAAATAAAGAGGTCACACCACCCTCTGCTG...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCATGGATCACCTGGTTTaGGTGCAGGAAATCCAAAGC +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFMDHLV*VQEIQS
Trigger: GCTTTGGATTTCCTGCACTCAAACCAGGTGATCCAT...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGTCACGGAATACAGCTaGCAGTCTCTCAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIVTEYS*QSLRIL
Trigger: CAGAATCCTGAGAGACTGTCAGCTGTATTCCGTGAC...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATGCTTCACGGTGGAAGTaGCCACTTTATGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHASRWK*PLYGHF
Trigger: GAAGTGACCATAAAGTGGTCACTTCCACCGTGAAGC...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACGGGAGTGTGCATCTTTaGGAAACCTTTTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYGSVHL*ETFFFK
Trigger: TTTGAAGAAAAAGGTTTCTCAAAGATGCACACTCCC...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATACACTTGGCCTGGATTTaGGTCTGCAAAACCATGAGG +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIHLAWI*VCKTMR
Trigger: CCTCATGGTTTTGCAGACTCAAATCCAGGCCAAGTG...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372010.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATCCATGTTGGGCGAACTaGACTTCTGACTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHPCWAN*TSDSSE
Trigger: TTCTGAGGAGTCAGAAGTTCAGTTCGCCCAACATGG...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446737.5
CDS-3UTR GCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTGAATTCCCCGGTGACTaGATCAAACCCCACATGAAT +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSEFPGD*IKPHMN
Trigger: ATTCATGTGGGGTTTGATGCAGTCACCGGGGAATTC...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGTAATCGTGCCCATTaGTCTGGAATTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHSNRAH*SGIPSG
Trigger: CCCAGAGGGAATTCCAGAGCAATGGGCACGATTACT...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372010.5
CDS-3UTR GCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCACTCGAAGGATGGGCTaGTATGTATCCATGTGCACT +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFTRRMG*YVSMCT
Trigger: AGTGCACATGGATACATAGCAGCCCATCCTTCGAGT...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTACTCGAAGGATGGGCTaGTATGTATCCATGTGCACT +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSTRRMG*YVSMCT
Trigger: AGTGCACATGGATACATAGCAGCCCATCCTTCGAGT...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGCAATGGAGGCTCAGATaGTGTTTTTGTACTCGAAGG +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREQWRLR*CFCTRR
Trigger: CCTTCGAGTACAAAAACAGCATCTGAGCCTCCATTG...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATACCCCAACACTCACAATaGTTCTTAGCTTCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIPQHSQ*FLASLR
Trigger: TCTTAGAGAAGCTAAGAAGCATTGTGAGTGTTGGGG...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCCTCTCTGCAGACAGCTaGTATCTGTCCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFLSADS*YLSFIH
Trigger: ATGGATGAAGGACAGATAGCAGCTGTCTGCAGAGAG...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCAGGAAATCCAAAGCTTaGAGGCACTCTCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFRKSKA*RHSLQT
Trigger: TGTCTGCAGAGAGTGCCTGCAAGCTTTGGATTTCCT...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTATCACCTGGTTTGAGTaGAGGAAATCCAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCITWFE*RKSKAC
Trigger: GCAAGCTTTGGATTTCCTGCACTCAAACCAGGTGAT...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp CTCCTCCTGGCTGATGTACTGAGATTAAAAACTCAATGCATTAGTAGCTACAGGGTGCTTCGTTTACTTTaGTCAGGAGTGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LLLADVLRLKTQCISSYRVLRLL*SGVIWA
Trigger: TGCCCAGATCACTCCTGAGCAAAGTAAACGAAGCAC...CCTGTAGCTACTAATGCATTGAGTTTTTAATCTCAGTACATCAGCCAGGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACGCTGCTGTTCTTAATTaGTTCCTTTGCAGCGATAAT +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYAAVLN*FLCSDN
Trigger: ATTATCGCTGCAAAGGAAGCAATTAAGAACAGCAGC...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCTCACTTCAACATTGCTaGCCTGTTTGGGCTGCGATT +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFSLQHC*PVWAAI
Trigger: AATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGA...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTTCACTTCAACATTGCTaGCCTGTTTGGGCTGCGATT +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSSLQHC*PVWAAI
Trigger: AATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGA...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGAAACCTTTACACCTTaGTCATCCCAGAACAGGGCC +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIETFTP*SSQNRA
Trigger: GGCCCTGTTCTGGGATGAGCAAGGTGTAAAGGTTTC...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ACTCAGGACATTTTGGAATCAACATTGAAAGATGTGCCCTCGTTATCTCAGGGCGATCTGAAGGGTCACTaGTCCAAGGTCTCCAAAATA +
Preference number: 4 (lower is better)
Translates to: TQDILESTLKDVPSLSQGDLKGH*SKVSKI
Trigger: TATTTTGGAGACCTTGGAGCAGTGACCCTTCAGATC...GCCCTGAGATAACGAGGGCACATCTTTCAATGTTGATTCCAAAATGTCCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAACTAGCAAATATCTCTaGCCTGCATGCTCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYITSKYL*PACSAL
Trigger: GAGCGCAGAGCATGCAGGGCAGAGATATTTGCTAGT...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp CCATACCAAAGCAGAGGGCAGACAACCTGTTTTAAAGCAGAAGAGTGTGTTTGGCCTTCCCAGTCCACATaGAAATACACGTTCAGAATT +
Preference number: 4 (lower is better)
Translates to: PYQSRGQTTCFKAEECVWPSQST*KYTFRI
Trigger: AATTCTGAACGTGTATTTGCATGTGGACTGGGAAGG...CCAAACACACTCTTCTGCTTTAAAACAGGTTGTCTGCCCTCTGCTTTGGTATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGTGTTGCCAGGCTTACTaGTGGTATTATGGGATAGCA +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLRECCQAY*WYYGIA
Trigger: TGCTATCCCATAATACCAGCAGTAAGCCTGGCAACA...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAATGAATATGGTATTTaGGGGTCCATAAAGCACACC +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYNEYGI*GSIKHT
Trigger: GGTGTGCTTTATGGACCCGCAAATACCATATTCATT...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTAGGGGCCATGGGAAGTaGTTTGGAGCTGTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFRGHGK*FGAVVE
Trigger: CTCAACCACAGCTCCAAACCACTTCCCATGGCCCCT...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATTTTATCCCCTCCTCCTaGGAAGATAGAGCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHFIPSS*EDRAKP
Trigger: AGGCTTCGCTCTATCTTCCCAGGAGGAGGGGATAAA...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAGTTATGTTGGAAGTTTaGAGTAATCGTGCCCATTGC +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIVMLEV*SNRAHC
Trigger: GCAATGGGCACGATTACTCCAAACTTCCAACATAAC...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATATTTGTACTCGAAGGATaGGCTGCTATGTATCCATGT +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIFVLEG*AAMYPC
Trigger: ACATGGATACATAGCAGCCCATCCTTCGAGTACAAA...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTGGTGCGATAACTGGTaGTGGCTCATTTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINWCDNW*WLIFIF
Trigger: GAAGATGAAAATGAGCCACCACCAGTTATCGCACCA...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGTGGTGCGATAACTGGTaGTGGCTCATTTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREWCDNW*WLIFIF
Trigger: GAAGATGAAAATGAGCCACCACCAGTTATCGCACCA...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATTGTATGCTCTGGTCTTaGTGCGATAACTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHCMLWS*CDNWWW
Trigger: CCACCACCAGTTATCGCACCAAGACCAGAGCATACA...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATATGTATGCTCTGGTCTTaGTGCGATAACTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYICMLWS*CDNWWW
Trigger: CCACCACCAGTTATCGCACCAAGACCAGAGCATACA...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTCTGCTGGTGAAGCAATaGATTCAACCACAGAACGAG +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSLLVKQ*IQPQNE
Trigger: CTCGTTCTGTGGTTGAATCCATTGCTTCACCAGCAG...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAATTTTCAGCAGAGGGTaGTGTGACCTCTTTATTTGG +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIIFSRG*CDLFIW
Trigger: CCAAATAAAGAGGTCACACCACCCTCTGCTGAAAAT...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTGGTTCATCTGCTTTATaGCCACCTCTTGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSGSSAL*PPLVLL
Trigger: CAACAGGACAAGAGGTGGCCATAAAGCAGATGAACC...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTCTCTATGGATCACCTaGTTTGAGTGCAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINSLWIT*FECRKS
Trigger: GGATTTCCTGCACTCAAACCAGGTGATCCATAGAGA...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTCTCTTTATATCTCTATaGATCACCTGGTTTGAGTGC +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTLFISL*ITWFEC
Trigger: GCACTCAAACCAGGTGATCCATAGAGATATAAAGAG...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACCTCTTTATATCTCTATaGATCACCTGGTTTGAGTGC +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYLFISL*ITWFEC
Trigger: GCACTCAAACCAGGTGATCCATAGAGATATAAAGAG...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATATGCTCAGGAGTGATCTaGGCACAGAACCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYICSGVI*AQNPKS
Trigger: TGACTTTGGGTTCTGTGCCCAGATCACTCCTGAGCA...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp CCAATCACTGTGGGAGTTGTCATCAGAAATGCTATCTTTGGTTCCCAACAAATTTGCTCAGGAGTGATCTaGGCACAGAACCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: PITVGVVIRNAIFGSQQICSGVI*AQNPKS
Trigger: TGACTTTGGGTTCTGTGCCCAGATCACTCCTGAGCA...AATTTGTTGGGAACCAAAGATAGCATTTCTGATGACAACTCCCACAGTGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATTCAGAGGAGTCAGGCTaGAGAGAGGCTTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHSEESG*REAWLI
Trigger: AATTAGCCAAGCCTCTCTCCAGCCTGACTCCTCTGA...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAGAAGTGACCACTTTATaGTCACTTCAACATTGCTGC +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIEVTTL*SLQHCC
Trigger: GCAGCAATGTTGAAGTGACCATAAAGTGGTCACTTC...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATACAGGTCTAGAGGTCTaGAAAGGGGAGTTAGTGAAT +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINTGLEV*KGELVN
Trigger: ATTCACTAACTCCCCTTTCCAGACCTCTAGACCTGT...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360648.8
ENST00000417227.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTACAGGTCTAGAGGTCTaGAAAGGGGAGTTAGTGAAT +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCTGLEV*KGELVN
Trigger: ATTCACTAACTCCCCTTTCCAGACCTCTAGACCTGT...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360648.8
ENST00000417227.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTGTCACCAACAGGAATaGACCTCCTTCTGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINCHQQE*TSFCSN
Trigger: ATTGGAACAGAAGGAGGTCCATTCCTGTTGGTGACA...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ACTCAGGACATTTTGGAATCAACATTGAAAGATGTGCCCTCGTTATCTCAGGGCTCAGCTGCTCTTTCTTaGGGGAAACCTTTACACCTT +
Preference number: 4 (lower is better)
Translates to: TQDILESTLKDVPSLSQGSAALS*GKPLHL
Trigger: AAGGTGTAAAGGTTTCCCCCAAGAAAGAGCAGCTGA...GCCCTGAGATAACGAGGGCACATCTTTCAATGTTGATTCCAAAATGTCCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATTCGTGCCCATTGCTCTaGAATTCCAGTGAATTCCCC +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHSCPLL*NSSEFP
Trigger: GGGGAATTCACTGGAATTCCAGAGCAATGGGCACGA...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000425146.5
ENST00000446737.5
CDS-3UTR CCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACGCAACATCAAAGATTTaGATAGACTCACCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYATSKI*IDSPVS
Trigger: TGACACAGGTGAGTCTATCCAAATCTTTGATGTTGC...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp CCATACCAAAGCAGAGGGCAGACAACCTGTTTTAAAGCAGAAGAGTGTGTTTGGTGCCAGGCTTACTGCTaGTATTATGGGATAGCATTT +
Preference number: 4 (lower is better)
Translates to: PYQSRGQTTCFKAEECVWCQAYC*YYGIAF
Trigger: AAATGCTATCCCATAATACCAGCAGTAAGCCTGGCA...CCAAACACACTCTTCTGCTTTAAAACAGGTTGTCTGCCCTCTGCTTTGGTATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp ACTCAGGACATTTTGGAATCAACATTGAAAGATGTGCCCTCGTTATCTCAGGGCACTGGCCAATCACTGTaGGAGTTGTCATCAGAAATG +
Preference number: 4 (lower is better)
Translates to: TQDILESTLKDVPSLSQGTGQSL*ELSSEM
Trigger: CATTTCTGATGACAACTCCCACAGTGATTGGCCAGT...GCCCTGAGATAACGAGGGCACATCTTTCAATGTTGATTCCAAAATGTCCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTTCGTGCCCATTGCTCTaGAATTCCCATTTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSSCPLL*NSHFSL
Trigger: GAGGGAAAAATGGGAATTCCAGAGCAATGGGCACGA...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417227.5
ENST00000519681.5
3UTR CAA 72 bp GCCCTATTCCTAACTCAGGACATTTTGGAATCAACATaGAAAGATGTGCCCTCGTTATCTCAGGGCACACTA +
Preference number: 4 (lower is better)
Translates to: ALFLTQDILEST*KDVPSLSQGTL
Trigger: TAGTGTGCCCTGAGATAACGAGGGCACATCTTTCAATGTTGATTCCAAAATGTCCTGAGTTAGGAATAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTGTTTGGAGCTGTGGTTaGGTGCTGAAGAATCCCGGT +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFVWSCG*VLKNPG
Trigger: ACCGGGATTCTTCAGCACTCAACCACAGCTCCAAAC...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATCGTATGCTCAAAGTCTaGAGGAAGAGAGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHRMLKV*RKRDLW
Trigger: CCAGAGATCTCTCTTCCTTCAGACTTTGAGCATACG...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp AACAATCTGGCGTTCAAGTTACTCGATTGTACCAAATGTGAATCCTTCAGCATCCGTATGCTCAAAGTCTaGAGGAAGAGAGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: NNLAFKLLDCTKCESFSIRMLKV*RKRDLW
Trigger: CCAGAGATCTCTCTTCCTTCAGACTTTGAGCATACG...GATGCTGAAGGATTCACATTTGGTACAATCGAGTAACTTGAACGCCAGATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTCCATACAGGTCTCTGTaGCCACATCAGTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFPYRSL*PHQSES
Trigger: GCTCTCTGACTGATGTGGTCACAGAGACCTGTATGG...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATGGATCACCTGGTTTaGGTGCAGGAAATCCAAAGC +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIMDHLV*VQEIQS
Trigger: GCTTTGGATTTCCTGCACTCAAACCAGGTGATCCAT...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAGTTTCTATTCATTTaGAAGGTAAAGAACCCCCAC +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYKFLFI*KVKNPH
Trigger: GTGGGGGTTCTTTACCTTTCAAATGAATAGAAACTT...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTAAGTTTCTATTCATTTaGAAGGTAAAGAACCCCCAC +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTKFLFI*KVKNPH
Trigger: GTGGGGGTTCTTTACCTTTCAAATGAATAGAAACTT...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCAGTGAATGCACAAAATaGGGGGATTCACTACTGGCT +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFSECTK*GDSLLA
Trigger: AGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACT...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTAGTGAATGCACAAAATaGGGGGATTCACTACTGGCT +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSSECTK*GDSLLA
Trigger: AGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACT...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAGGGAGTGTGCATCTTTaGGAAACCTTTTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIGSVHL*ETFFFK
Trigger: TTTGAAGAAAAAGGTTTCTCAAAGATGCACACTCCC...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATACAAACACAACACTATaGAGAGGGAGTGTGCATCTT +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINTNTTL*RGSVHL
Trigger: AAGATGCACACTCCCTCTTCATAGTGTTGTGTTTGT...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTTTGGGTAAGGAGTTTTaGAGGAGGTTTGAATGCAAG +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCLGKEF*RRFECK
Trigger: CTTGCATTCAAACCTCCTTCAAAACTCCTTACCCAA...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGTTGGGTAAGGAGTTTTaGAGGAGGTTTGAATGCAAG +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLRELGKEF*RRFECK
Trigger: CTTGCATTCAAACCTCCTTCAAAACTCCTTACCCAA...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTTGGGTAAGGAGTTTTaGAGGAGGTTTGAATGCAAG +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINLGKEF*RRFECK
Trigger: CTTGCATTCAAACCTCCTTCAAAACTCCTTACCCAA...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTATTTTTCCCTCTGATTaGCTTGAAGCGACCGTCACA +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSIFPSD*LEATVT
Trigger: TGTGACGGTCGCTTCAAGTCAATCAGAGGGAAAAAT...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360648.8
ENST00000417227.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCATTTTTCCCTCTGATTaGCTTGAAGCGACCGTCACA +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFIFPSD*LEATVT
Trigger: TGTGACGGTCGCTTCAAGTCAATCAGAGGGAAAAAT...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360648.8
ENST00000417227.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATATGTGGTTTCTCCTATaGGGATTTCCTAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINMWFLL*GFPRFR
Trigger: TCTGAACCTAGGAAATCCTCATAGGAGAAACCACAT...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp AACAATCTGGCGTTCAAGTTACTCGATTGTACCAAATGTGAATCCTTCAGCATCGGATGTAGCCTTCACTaGCCTCCCATTTCTTACAGA +
Preference number: 4 (lower is better)
Translates to: NNLAFKLLDCTKCESFSIGCSLH*PPISYR
Trigger: TCTGTAAGAAATGGGAGGTCAGTGAAGGCTACATCC...GATGCTGAAGGATTCACATTTGGTACAATCGAGTAACTTGAACGCCAGATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTCAGTCACTAATGTACTaGTTTTTATTTGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTQSLMY*FLFASQ
Trigger: CTGGGATGCAAATAAAAATCAGTACATTAGTGACTG...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAACCCAACATGGTGACTaGTTTGAGGGGATTGTGTCA +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYITQHGD*FEGIVS
Trigger: TGACACAATCCCCTCAAATCAGTCACCATGTTGGGT...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAACTAAGCAGCATATCTaGGGTGACTACCTCATTATT +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQITKQHI*GDYLII
Trigger: AATAATGAGGTAGTCACCTCAGATATGCTGCTTAGT...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGTTATCCCACTACATCTaGCTCATTCTCTACTATCGC +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLRELSHYI*LILYYR
Trigger: GCGATAGTAGAGAATGAGTCAGATGTAGTGGGATAA...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGATCACTATAGCAGGCTaGATTTGCAAGGCAACCTAT +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREITIAG*ICKATY
Trigger: ATAGGTTGCCTTGCAAATTCAGCCTGCTATAGTGAT...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTCGAAACAACTGTAAATaGATTGGAAGGCTGCCACAA +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCRNNCK*IGRLPQ
Trigger: TTGTGGCAGCCTTCCAATTCATTTACAGTTGTTTCG...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAACTCGAAGGATGGGCTaGTATGTATCCATGTGCACT +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYITRRMG*YVSMCT
Trigger: AGTGCACATGGATACATAGCAGCCCATCCTTCGAGT...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCCAATGGAGGCTCAGATaGTGTTTTTGTACTCGAAGG +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFQWRLR*CFCTRR
Trigger: CCTTCGAGTACAAAAACAGCATCTGAGCCTCCATTG...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTATGCTCTGGTCTTGGTaGGATAACTGGTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFMLWSW*DNWWWL
Trigger: GAGCCACCACCAGTTATCGCACCAAGACCAGAGCAT...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGCCCCAACACTCACAATaGTTCTTAGCTTCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREPQHSQ*FLASLR
Trigger: TCTTAGAGAAGCTAAGAAGCATTGTGAGTGTTGGGG...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATCTCTCTGCAGACAGCTaGTATCTGTCCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHLSADS*YLSFIH
Trigger: ATGGATGAAGGACAGATAGCAGCTGTCTGCAGAGAG...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGGAAATCCAAAGCTTaGAGGCACTCTCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHRKSKA*RHSLQT
Trigger: TGTCTGCAGAGAGTGCCTGCAAGCTTTGGATTTCCT...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATGTGCTTCGTTTACTTTaGTCAGGAGTGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHVLRLL*SGVIWA
Trigger: TGCCCAGATCACTCCTGAGCAAAGTAAACGAAGCAC...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGTGCTTCGTTTACTTTaGTCAGGAGTGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIVLRLL*SGVIWA
Trigger: TGCCCAGATCACTCCTGAGCAAAGTAAACGAAGCAC...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTTTCCACCATTTCAATTaGCATAATTCCAAGAGACCA +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTFHHFN*HNSKRP
Trigger: TGGTCTCTTGGAATTATGGCAATTGAAATGGTGGAA...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACTTCCACCATTTCAATTaGCATAATTCCAAGAGACCA +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYFHHFN*HNSKRP
Trigger: TGGTCTCTTGGAATTATGGCAATTGAAATGGTGGAA...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTTTTAAAAATGGATGCTaGAAAAGCTCCTTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTFKNGC*KSSLAD
Trigger: ATCTGCCAAGGAGCTTTTGCAGCATCCATTTTTAAA...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTGTGAGGTGTAAGGCTTaGAGTCTTAGCGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFVRCKA*SLSGCC
Trigger: ACAGCAGCCGCTAAGACTGCAAGCCTTACACCTCAC...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATCTGCCCTGTTTGGGCTaGGATTCAGGCTTACAAATA +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHLPCLG*DSGLQI
Trigger: TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAG...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATATCACTTCAACATTGCTaGCCTGTTTGGGCTGCGATT +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYISLQHC*PVWAAI
Trigger: AATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGA...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACTATGAAGAGGGAGTGTaGATCTTTGAGAAACCTTTT +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYYEEGV*IFEKPF
Trigger: AAAAGGTTTCTCAAAGATGCACACTCCCTCTTCATA...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAGTAATCGTGCCCATTaGTCTGGAATTCCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCSNRAH*SGIPVN
Trigger: ATTCACTGGAATTCCAGAGCAATGGGCACGATTACT...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000425146.5
ENST00000446737.5
CDS-3UTR GCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCAGACTGGGAGATACTTaGACTACTGGCCATACCTTT +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFRLGDT*TTGHTF
Trigger: AAAGGTATGGCCAGTAGTGCAAGTATCTCCCAGTCT...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp CCATACCAAAGCAGAGGGCAGACAACCTGTTTTAAAGCAGAAGAGTGTGTTTGGTTATGGGATAGCATTTaGCTGATGGCAGCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: PYQSRGQTTCFKAEECVWLWDSI*LMAASK
Trigger: TTTAGAAGCTGCCATCAGGCAAATGCTATCCCATAA...CCAAACACACTCTTCTGCTTTAAAACAGGTTGTCTGCCCTCTGCTTTGGTATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAGTTGTCATCAGAAATaGTATCTTTGGTTCCCAACA +
Preference number: 4 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYSCHQK*YLWFPT
Trigger: TGTTGGGAACCAAAGATAGCATTTCTGATGACAACT...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTACTATTCATCCTCAGTaGAGGAGCCGGGGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFTIHPQ*RSRGFL
Trigger: GAGAAACCCCCGGCTCCTCCACTGAGGATGAATAGT...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAAGTGGTTTGGAGCTGTaGTTGAGTGCTGAAGAATCC +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYISGLEL*LSAEES
Trigger: GGATTCTTCAGCACTCAACCACAGCTCCAAACCACT...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGTGGTTTGGAGCTGTaGTTGAGTGCTGAAGAATCC +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHSGLEL*LSAEES
Trigger: GGATTCTTCAGCACTCAACCACAGCTCCAAACCACT...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGTCTCCTTCTTCTTATTaGTTTTATCCCCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLRESPSSY*FYPLLL
Trigger: CAGGAGGAGGGGATAAAACCAATAAGAAGAAGGAGA...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ACTCAGGACATTTTGGAATCAACATTGAAAGATGTGCCCTCGTTATCTCAGGGCTCTCCTTCTTCTTATTaGTTTTATCCCCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TQDILESTLKDVPSLSQGSPSSY*FYPLLL
Trigger: CAGGAGGAGGGGATAAAACCAATAAGAAGAAGGAGA...GCCCTGAGATAACGAGGGCACATCTTTCAATGTTGATTCCAAAATGTCCTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGGTTATGTTGGAAGTTTaGAGTAATCGTGCCCATTGC +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREVMLEV*SNRAHC
Trigger: GCAATGGGCACGATTACTCCAAACTTCCAACATAAC...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGTTTGTACTCGAAGGATaGGCTGCTATGTATCCATGT +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREFVLEG*AAMYPC
Trigger: ACATGGATACATAGCAGCCCATCCTTCGAGTACAAA...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGTGCGATAACTGGTGGTaGCTCATTTTCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLRECDNWW*LIFIFF
Trigger: GAAGAAGATGAAAATGAGCCACCACCAGTTATCGCA...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTTGGTGCGATAACTGGTaGTGGCTCATTTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSWCDNW*WLIFIF
Trigger: GAAGATGAAAATGAGCCACCACCAGTTATCGCACCA...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCTGGTGCGATAACTGGTaGTGGCTCATTTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFWCDNW*WLIFIF
Trigger: GAAGATGAAAATGAGCCACCACCAGTTATCGCACCA...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCTCTTGGTGCGATAACTaGTGGTGGCTCATTTTCATC +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFSWCDN*WWLIFI
Trigger: GATGAAAATGAGCCACCACCAGTTATCGCACCAAGA...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATCTGCTGGTGAAGCAATaGATTCAACCACAGAACGAG +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHLLVKQ*IQPQNE
Trigger: CTCGTTCTGTGGTTGAATCCATTGCTTCACCAGCAG...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGATTTTCAGCAGAGGGTaGTGTGACCTCTTTATTTGG +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREIFSRG*CDLFIW
Trigger: CCAAATAAAGAGGTCACACCACCCTCTGCTGAAAAT...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTATTTTCAGCAGAGGGTaGTGTGACCTCTTTATTTGG +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCIFSRG*CDLFIW
Trigger: CCAAATAAAGAGGTCACACCACCCTCTGCTGAAAAT...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATGGTTCATCTGCTTTATaGCCACCTCTTGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHGSSAL*PPLVLL
Trigger: CAACAGGACAAGAGGTGGCCATAAAGCAGATGAACC...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp CTCCTCCTGGCTGATGTACTGAGATTAAAAACTCAATGCATTAGTAGCTACAGGTCTCTATGGATCACCTaGTTTGAGTGCAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: LLLADVLRLKTQCISSYRSLWIT*FECRKS
Trigger: GGATTTCCTGCACTCAAACCAGGTGATCCATAGAGA...CCTGTAGCTACTAATGCATTGAGTTTTTAATCTCAGTACATCAGCCAGGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTTCTCTATGGATCACCTaGTTTGAGTGCAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSSLWIT*FECRKS
Trigger: GGATTTCCTGCACTCAAACCAGGTGATCCATAGAGA...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATACTCTTTATATCTCTATaGATCACCTGGTTTGAGTGC +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQILFISL*ITWFEC
Trigger: GCACTCAAACCAGGTGATCCATAGAGATATAAAGAG...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp CCATACCAAAGCAGAGGGCAGACAACCTGTTTTAAAGCAGAAGAGTGTGTTTGGCTCTTTATATCTCTATaGATCACCTGGTTTGAGTGC +
Preference number: 4 (lower is better)
Translates to: PYQSRGQTTCFKAEECVWLFISL*ITWFEC
Trigger: GCACTCAAACCAGGTGATCCATAGAGATATAAAGAG...CCAAACACACTCTTCTGCTTTAAAACAGGTTGTCTGCCCTCTGCTTTGGTATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGGAAGTGACCACTTTATaGTCACTTCAACATTGCTGC +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREEVTTL*SLQHCC
Trigger: GCAGCAATGTTGAAGTGACCATAAAGTGGTCACTTC...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATACTCAAGTCTAGAATCTaGAACTGGATTCTGCCACGG +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYILKSRI*NWILPR
Trigger: CCGTGGCAGAATCCAGTTCCAGATTCTAGACTTGAG...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCTCAGCTGCTCTTTCTTaGGGGAAACCTTTACACCTT +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFSAALS*GKPLHL
Trigger: AAGGTGTAAAGGTTTCCCCCAAGAAAGAGCAGCTGA...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCCCTTCAGCATCACTGTaGCATGAGAAACAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFPSASL*HEKQLL
Trigger: AAGAAGCTGTTTCTCATGCCACAGTGATGCTGAAGG...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGTTAAATCTTCTTACATaGCTTGGCCATCCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLRELNLLT*LGHPVA
Trigger: GGCTACTGGATGGCCAAGCCATGTAAGAAGATTTAA...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTGAAAATGGTGGGAGCTaGGGATTTTATCCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCENGGS*GFYPSS
Trigger: ACTAGAAGGATAAAATCCCCAGCTCCCACCATTTTC...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTTGGGACTTGCCCTATTaGTTATTAAAAGAAGAATCC +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTWDLPY*LLKEES
Trigger: GGATTCTTCTTTTAATAACCAATAGGGCAAGTCCCA...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATAAGGAAGTTATCCTTTaGTTAGATGGTCTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINKEVIL*LDGLPC
Trigger: GCAAGGGAGACCATCTAACCAAAGGATAACTTCCTT...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp AACAGAACTATAACTGAATGCCAACAGGCAGAGACAGTCCTACATATTTGTTTACACTACCCTGTGATCTaGCTCCTCCTGGCTGATGTA +
Preference number: 4 (lower is better)
Translates to: NRTITECQQAETVLHICLHYPVI*LLLADV
Trigger: TACATCAGCCAGGAGGAGCCAGATCACAGGGTAGTG...TAAACAAATATGTAGGACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATATCGTGCCCATTGCTCTaGAATTCCCATTTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYISCPLL*NSHFSL
Trigger: GAGGGAAAAATGGGAATTCCAGAGCAATGGGCACGA...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417227.5
ENST00000519681.5
3UTR CAA 72 bp GACTTTCCCACTGCCCTATTCCTAACTCAGGACATTTaGGAATCAACATTGAAAGATGTGCCCTCGTTATCT +
Preference number: 4 (lower is better)
Translates to: DFPTALFLTQDI*ESTLKDVPSLS
Trigger: AGATAACGAGGGCACATCTTTCAATGTTGATTCCAAAATGTCCTGAGTTAGGAATAGGGCAGTGGGAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CAA 72 bp CTATCGCTGTTGATTTCCTCTTGGGTACTAAATCTGTaGAACATGTTGCCAGGCTTACTGCTGGTATTATGG +
Preference number: 4 (lower is better)
Translates to: LSLLISSWVLNL*NMLPGLLLVLW
Trigger: CCATAATACCAGCAGTAAGCCTGGCAACATGTTCAACAGATTTAGTACCCAAGAGGAAATCAACAGCGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTGCTGTGGTTGAGTGCTaGAGAATCCCGGTTGTTACT +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFAVVEC*RIPVVT
Trigger: AGTAACAACCGGGATTCTTCAGCACTCAACCACAGC...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGCATCAAACCCCACATaGATCGTATGCTCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIASNPT*IVCSKS
Trigger: AGACTTTGAGCATACGATTCATGTGGGGTTTGATGC...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATGCATCAAACCCCACATaGATCGTATGCTCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHASNPT*IVCSKS
Trigger: AGACTTTGAGCATACGATTCATGTGGGGTTTGATGC...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAAGTTTCTATTCATTTaGAAGGTAAAGAACCCCCAC +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIKFLFI*KVKNPH
Trigger: GTGGGGGTTCTTTACCTTTCAAATGAATAGAAACTT...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTACAAACACAACACTATaGAGAGGGAGTGTGCATCTT +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSTNTTL*RGSVHL
Trigger: AAGATGCACACTCCCTCTTCATAGTGTTGTGTTTGT...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCTTGGGTAAGGAGTTTTaGAGGAGGTTTGAATGCAAG +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFLGKEF*RRFECK
Trigger: CTTGCATTCAAACCTCCTTCAAAACTCCTTACCCAA...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp AACAGAACTATAACTGAATGCCAACAGGCAGAGACAGTCCTACATATTTGTTTACCTAGGTTCAGAACCTaGACTCACCTAGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: NRTITECQQAETVLHICLPRFRT*THLAGC
Trigger: ACATCCTGCTAGGTGAGTTCAGGTTCTGAACCTAGG...TAAACAAATATGTAGGACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp CTCCTCCTGGCTGATGTACTGAGATTAAAAACTCAATGCATTAGTAGCTACAGGGGAATTCTGTCGGACTaGCATTTCTTGGGATATGAT +
Preference number: 4 (lower is better)
Translates to: LLLADVLRLKTQCISSYRGILSD*HFLGYD
Trigger: ATCATATCCCAAGAAATGTCAGTCCGACAGAATTCC...CCTGTAGCTACTAATGCATTGAGTTTTTAATCTCAGTACATCAGCCAGGAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp CTCCTCCTGGCTGATGTACTGAGATTAAAAACTCAATGCATTAGTAGCTACAGGCTTTCCCCTTCTGGCTaGATGTACATAAGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LLLADVLRLKTQCISSYRLSPSG*MYISSV
Trigger: AACAGAACTTATGTACATTCAGCCAGAAGGGGAAAG...CCTGTAGCTACTAATGCATTGAGTTTTTAATCTCAGTACATCAGCCAGGAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCCCAGGATTTCATTaGATTTCCCGGCACTATGAG +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIIPGFH*ISRHYE
Trigger: CTCATAGTGCCGGGAAATTCAATGAAATCCTGGGAT...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp AACAGAACTATAACTGAATGCCAACAGGCAGAGACAGTCCTACATATTTGTTTATTTCTCTGCCTACAGTaGTCTGAAGGGTCACTGCTC +
Preference number: 4 (lower is better)
Translates to: NRTITECQQAETVLHICLFLCLQ*SEGSLL
Trigger: GAGCAGTGACCCTTCAGATCACTGTAGGCAGAGAAA...TAAACAAATATGTAGGACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATATTTTGGAATCAACATTaGAAGATGTGCCCTCGTTAT +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIFWNQH*KMCPRY
Trigger: ATAACGAGGGCACATCTTTCAATGTTGATTCCAAAA...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp CCATACCAAAGCAGAGGGCAGACAACCTGTTTTAAAGCAGAAGAGTGTGTTTGGTCAGTTTACAAATGCTaGATTTCAGTCCTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: PYQSRGQTTCFKAEECVWSVYKC*ISVLLF
Trigger: GAACAAGAGGACTGAAATTCAGCATTTGTAAACTGA...CCAAACACACTCTTCTGCTTTAAAACAGGTTGTCTGCCCTCTGCTTTGGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp CTCCTCCTGGCTGATGTACTGAGATTAAAAACTCAATGCATTAGTAGCTACAGGCCCCAACACTCACAATaGTTCTTAGCTTCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: LLLADVLRLKTQCISSYRPQHSQ*FLASLR
Trigger: TCTTAGAGAAGCTAAGAAGCATTGTGAGTGTTGGGG...CCTGTAGCTACTAATGCATTGAGTTTTTAATCTCAGTACATCAGCCAGGAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATATCACCTGGTTTGAGTaGAGGAAATCCAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHITWFE*RKSKAC
Trigger: GCAAGCTTTGGATTTCCTGCACTCAAACCAGGTGAT...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATATTCCACCATTTCAATTaGCATAATTCCAAGAGACCA +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIFHHFN*HNSKRP
Trigger: TGGTCTCTTGGAATTATGGCAATTGAAATGGTGGAA...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATATTTAAAAATGGATGCTaGAAAAGCTCCTTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIFKNGC*KSSLAD
Trigger: ATCTGCCAAGGAGCTTTTGCAGCATCCATTTTTAAA...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp CCATACCAAAGCAGAGGGCAGACAACCTGTTTTAAAGCAGAAGAGTGTGTTTGGTTTAAAAATGGATGCTaGAAAAGCTCCTTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: PYQSRGQTTCFKAEECVWFKNGC*KSSLAD
Trigger: ATCTGCCAAGGAGCTTTTGCAGCATCCATTTTTAAA...CCAAACACACTCTTCTGCTTTAAAACAGGTTGTCTGCCCTCTGCTTTGGTATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTCTTAATTGCTTCCTTTaGAGCGATAATCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCLNCFL*SDNQRS
Trigger: ACTCCTCTGATTATCGCTGCAAAGGAAGCAATTAAG...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGCTTAATTGCTTCCTTTaGAGCGATAATCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLRELNCFL*SDNQRS
Trigger: ACTCCTCTGATTATCGCTGCAAAGGAAGCAATTAAG...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGGCTGCTGTTCTTAATTaGTTCCTTTGCAGCGATAAT +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREAAVLN*FLCSDN
Trigger: ATTATCGCTGCAAAGGAAGCAATTAAGAACAGCAGC...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATATTCTTCCATCTTTCCTaGAGCAGAGTTTTATTTCAG +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIFFHLS*SRVLFQ
Trigger: CTGAAATAAAACTCTGCTGCAGGAAAGATGGAAGAA...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGCTTAAACGTGATATTTaGCATCACTATAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLRELKRDI*HHYSRL
Trigger: CAGCCTGCTATAGTGATGGCAAATATCACGTTTAAG...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTTTTATCCCCTCCTCCTaGGAAGATAGAGCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFFIPSS*EDRAKP
Trigger: AGGCTTCGCTCTATCTTCCCAGGAGGAGGGGATAAA...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCTCTCCTTCTTCTTATTaGTTTTATCCCCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFSPSSY*FYPLLL
Trigger: CAGGAGGAGGGGATAAAACCAATAAGAAGAAGGAGA...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTGTTATGTTGGAAGTTTaGAGTAATCGTGCCCATTGC +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSVMLEV*SNRAHC
Trigger: GCAATGGGCACGATTACTCCAAACTTCCAACATAAC...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTTTTGTACTCGAAGGATaGGCTGCTATGTATCCATGT +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSFVLEG*AAMYPC
Trigger: ACATGGATACATAGCAGCCCATCCTTCGAGTACAAA...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCTTTGTACTCGAAGGATaGGCTGCTATGTATCCATGT +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFFVLEG*AAMYPC
Trigger: ACATGGATACATAGCAGCCCATCCTTCGAGTACAAA...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCTGCGATAACTGGTGGTaGCTCATTTTCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFCDNWW*LIFIFF
Trigger: GAAGAAGATGAAAATGAGCCACCACCAGTTATCGCA...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATTGGTGCGATAACTGGTaGTGGCTCATTTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHWCDNW*WLIFIF
Trigger: GAAGATGAAAATGAGCCACCACCAGTTATCGCACCA...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATATCTTGGTGCGATAACTaGTGGTGGCTCATTTTCATC +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYISWCDN*WWLIFI
Trigger: GATGAAAATGAGCCACCACCAGTTATCGCACCAAGA...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTTGTATGCTCTGGTCTTaGTGCGATAACTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFCMLWS*CDNWWW
Trigger: CCACCACCAGTTATCGCACCAAGACCAGAGCATACA...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp CTCCTCCTGGCTGATGTACTGAGATTAAAAACTCAATGCATTAGTAGCTACAGGATTTTCAGCAGAGGGTaGTGTGACCTCTTTATTTGG +
Preference number: 4 (lower is better)
Translates to: LLLADVLRLKTQCISSYRIFSRG*CDLFIW
Trigger: CCAAATAAAGAGGTCACACCACCCTCTGCTGAAAAT...CCTGTAGCTACTAATGCATTGAGTTTTTAATCTCAGTACATCAGCCAGGAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCATTTTCAGCAGAGGGTaGTGTGACCTCTTTATTTGG +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFIFSRG*CDLFIW
Trigger: CCAAATAAAGAGGTCACACCACCCTCTGCTGAAAAT...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATTCTCTATGGATCACCTaGTTTGAGTGCAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHSLWIT*FECRKS
Trigger: GGATTTCCTGCACTCAAACCAGGTGATCCATAGAGA...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGCTCTTTATATCTCTATaGATCACCTGGTTTGAGTGC +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLRELFISL*ITWFEC
Trigger: GCACTCAAACCAGGTGATCCATAGAGATATAAAGAG...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTTCAGAGGAGTCAGGCTaGAGAGAGGCTTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFSEESG*REAWLI
Trigger: AATTAGCCAAGCCTCTCTCCAGCCTGACTCCTCTGA...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATTGTCACCAACAGGAATaGACCTCCTTCTGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHCHQQE*TSFCSN
Trigger: ATTGGAACAGAAGGAGGTCCATTCCTGTTGGTGACA...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATATCTCTTTCCCCTTCTaGCTGAATGTACATAAGTTC +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINISFPF*LNVHKF
Trigger: GAACTTATGTACATTCAGCCAGAAGGGGAAAGAGAT...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TCCCAGGCCCATCAAACTGTCAGTTTACAAATGCTGAATTTCAGTCCTCTTGTTGTTAAACTCAAACATTaGGGTGCAGTTCACAAGCCT +
Preference number: 4 (lower is better)
Translates to: SQAHQTVSLQMLNFSPLVVKLKH*GAVHKP
Trigger: AGGCTTGTGAACTGCACCCCAATGTTTGAGTTTAAC...AACAAGAGGACTGAAATTCAGCATTTGTAAACTGACAGTTTGATGGGCCTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTGAAGGCATCTGCTTCTaGCATCTTTTCTATGTGTCT +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSEGICF*HLFYVS
Trigger: AGACACATAGAAAAGATGCCAGAAGCAGATGCCTTC...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTAGAATGTTAGACTTTTaGAAAGACCCTAAGGATCAT +
Preference number: 4 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTRMLDF*KDPKDH
Trigger: ATGATCCTTAGGGTCTTTCCAAAAGTCTAACATTCT...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TCCCAGGCCCATCAAACTGTCAGTTTACAAATGCTGAATTTCAGTCCTCTTGTTTACTCATCATACAACTaGCCAATCACTGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: SQAHQTVSLQMLNFSPLVYSSYN*PITVGV
Trigger: AACTCCCACAGTGATTGGCCAGTTGTATGATGAGTA...AACAAGAGGACTGAAATTCAGCATTTGTAAACTGACAGTTTGATGGGCCTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCGTGTGTGAGAGCATCTaGGTGTATTTTGACTGTGAT +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFVCESI*VYFDCD
Trigger: ATCACAGTCAAAATACACCCAGATGCTCTCACACAC...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000425146.5
ENST00000446737.5
3UTR CAA 72 bp GACCACTTTATGGTCACTTCAACATTGCTGCCCTGTTaGGGCTGCGATTCAGGCTTACAAATAAATTACATA +
Preference number: 4 (lower is better)
Translates to: DHFMVTSTLLPC*GCDSGLQINYI
Trigger: TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGTGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
3UTR CAA 72 bp CTCGTTATCTCAGGGCACACTAGCAACATCAAAGATTaGGATAGACTCACCTGTGTCAAGATGAGCTTAAAA +
Preference number: 4 (lower is better)
Translates to: LVISGHTSNIKD*DRLTCVKMSLK
Trigger: TTTTAAGCTCATCTTGACACAGGTGAGTCTATCCAAATCTTTGATGTTGCTAGTGTGCCCTGAGATAACGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CAA 72 bp TGTACTCATCATACAACTGGCCAATCACTGTGGGAGTaGTCATCAGAAATGCTATCTTTGGTTCCCAACAAA +
Preference number: 4 (lower is better)
Translates to: CTHHTTGQSLWE*SSEMLSLVPNK
Trigger: TTTGTTGGGAACCAAAGATAGCATTTCTGATGACAACTCCCACAGTGATTGGCCAGTTGTATGATGAGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTCGTATGCTCAAAGTCTaGAGGAAGAGAGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFRMLKV*RKRDLW
Trigger: CCAGAGATCTCTCTTCCTTCAGACTTTGAGCATACG...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTATGGATCACCTGGTTTaGGTGCAGGAAATCCAAAGC +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFMDHLV*VQEIQS
Trigger: GCTTTGGATTTCCTGCACTCAAACCAGGTGATCCAT...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATAAGTTTCTATTCATTTaGAAGGTAAAGAACCCCCAC +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINKFLFI*KVKNPH
Trigger: GTGGGGGTTCTTTACCTTTCAAATGAATAGAAACTT...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCGGGAGTGTGCATCTTTaGGAAACCTTTTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFGSVHL*ETFFFK
Trigger: TTTGAAGAAAAAGGTTTCTCAAAGATGCACACTCCC...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAACAAACACAACACTATaGAGAGGGAGTGTGCATCTT +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYITNTTL*RGSVHL
Trigger: AAGATGCACACTCCCTCTTCATAGTGTTGTGTTTGT...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp AACAATCTGGCGTTCAAGTTACTCGATTGTACCAAATGTGAATCCTTCAGCATCTTGGGTAAGGAGTTTTaGAGGAGGTTTGAATGCAAG +
Preference number: 4 (lower is better)
Translates to: NNLAFKLLDCTKCESFSILGKEF*RRFECK
Trigger: CTTGCATTCAAACCTCCTTCAAAACTCCTTACCCAA...GATGCTGAAGGATTCACATTTGGTACAATCGAGTAACTTGAACGCCAGATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATATTGGGTAAGGAGTTTTaGAGGAGGTTTGAATGCAAG +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYILGKEF*RRFECK
Trigger: CTTGCATTCAAACCTCCTTCAAAACTCCTTACCCAA...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATACACTTATTTTACAGATaGGGAAACAGCCATGGAGAG +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIHLFYR*GNSHGE
Trigger: CTCTCCATGGCTGTTTCCTCATCTGTAAAATAAGTG...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTGAATTCCCCGGTGACTaGATCAAACCCCACATGAAT +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFEFPGD*IKPHMN
Trigger: ATTCATGTGGGGTTTGATGCAGTCACCGGGGAATTC...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATCCCCAACACTCACAATaGTTCTTAGCTTCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHPQHSQ*FLASLR
Trigger: TCTTAGAGAAGCTAAGAAGCATTGTGAGTGTTGGGG...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATACCCCAACACTCACAATaGTTCTTAGCTTCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIPQHSQ*FLASLR
Trigger: TCTTAGAGAAGCTAAGAAGCATTGTGAGTGTTGGGG...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTAGGAAATCCAAAGCTTaGAGGCACTCTCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFRKSKA*RHSLQT
Trigger: TGTCTGCAGAGAGTGCCTGCAAGCTTTGGATTTCCT...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGTTCCACCATTTCAATTaGCATAATTCCAAGAGACCA +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREFHHFN*HNSKRP
Trigger: TGGTCTCTTGGAATTATGGCAATTGAAATGGTGGAA...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTTTTAAAAATGGATGCTaGAAAAGCTCCTTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCFKNGC*KSSLAD
Trigger: ATCTGCCAAGGAGCTTTTGCAGCATCCATTTTTAAA...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGTTTAAAAATGGATGCTaGAAAAGCTCCTTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREFKNGC*KSSLAD
Trigger: ATCTGCCAAGGAGCTTTTGCAGCATCCATTTTTAAA...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCCTTAATTGCTTCCTTTaGAGCGATAATCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFLNCFL*SDNQRS
Trigger: ACTCCTCTGATTATCGCTGCAAAGGAAGCAATTAAG...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTCTTAATTGCTTCCTTTaGAGCGATAATCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSLNCFL*SDNQRS
Trigger: ACTCCTCTGATTATCGCTGCAAAGGAAGCAATTAAG...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCGCTGCTGTTCTTAATTaGTTCCTTTGCAGCGATAAT +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFAAVLN*FLCSDN
Trigger: ATTATCGCTGCAAAGGAAGCAATTAAGAACAGCAGC...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTTTCTTCCATCTTTCCTaGAGCAGAGTTTTATTTCAG +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCFFHLS*SRVLFQ
Trigger: CTGAAATAAAACTCTGCTGCAGGAAAGATGGAAGAA...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp AACAGAACTATAACTGAATGCCAACAGGCAGAGACAGTCCTACATATTTGTTTACTGCCCTGTTTGGGCTaGGATTCAGGCTTACAAATA +
Preference number: 4 (lower is better)
Translates to: NRTITECQQAETVLHICLLPCLG*DSGLQI
Trigger: TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAG...TAAACAAATATGTAGGACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGTATGAAGAGGGAGTGTaGATCTTTGAGAAACCTTTT +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREYEEGV*IFEKPF
Trigger: AAAAGGTTTCTCAAAGATGCACACTCCCTCTTCATA...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp AACAATCTGGCGTTCAAGTTACTCGATTGTACCAAATGTGAATCCTTCAGCATCAGAACTATAACTGAATaGCAACAGGCAGAGACAGTC +
Preference number: 4 (lower is better)
Translates to: NNLAFKLLDCTKCESFSIRTITE*QQAETV
Trigger: GACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCT...GATGCTGAAGGATTCACATTTGGTACAATCGAGTAACTTGAACGCCAGATTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGGCTCTGCTATCTTGTaGCACTTGAGAATTAAACTC +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIGSAIL*HLRIKL
Trigger: GAGTTTAATTCTCAAGTGGCACAAGATAGCAGAGCC...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCAGTAATCGTGCCCATTaGTCTGGAATTCCCATTTTT +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFSNRAH*SGIPIF
Trigger: AAAAATGGGAATTCCAGAGCAATGGGCACGATTACT...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417227.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATATCTCCTTCTTCTTATTaGTTTTATCCCCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYISPSSY*FYPLLL
Trigger: CAGGAGGAGGGGATAAAACCAATAAGAAGAAGGAGA...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp CCATACCAAAGCAGAGGGCAGACAACCTGTTTTAAAGCAGAAGAGTGTGTTTGGCCAATTTTGTTATGTTaGAAGTTTGGAGTAATCGTG +
Preference number: 4 (lower is better)
Translates to: PYQSRGQTTCFKAEECVWPILLC*KFGVIV
Trigger: CACGATTACTCCAAACTTCCAACATAACAAAATTGG...CCAAACACACTCTTCTGCTTTAAAACAGGTTGTCTGCCCTCTGCTTTGGTATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATACCAATTTTGTTATGTTaGAAGTTTGGAGTAATCGTG +
Preference number: 4 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIPILLC*KFGVIV
Trigger: CACGATTACTCCAAACTTCCAACATAACAAAATTGG...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp AACAATCTGGCGTTCAAGTTACTCGATTGTACCAAATGTGAATCCTTCAGCATCTGCGATAACTGGTGGTaGCTCATTTTCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: NNLAFKLLDCTKCESFSICDNWW*LIFIFF
Trigger: GAAGAAGATGAAAATGAGCCACCACCAGTTATCGCA...GATGCTGAAGGATTCACATTTGGTACAATCGAGTAACTTGAACGCCAGATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATTGCGATAACTGGTGGTaGCTCATTTTCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHCDNWW*LIFIFF
Trigger: GAAGAAGATGAAAATGAGCCACCACCAGTTATCGCA...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATATGCGATAACTGGTGGTaGCTCATTTTCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYICDNWW*LIFIFF
Trigger: GAAGAAGATGAAAATGAGCCACCACCAGTTATCGCA...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTCTGCTGGTGAAGCAATaGATTCAACCACAGAACGAG +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFLLVKQ*IQPQNE
Trigger: CTCGTTCTGTGGTTGAATCCATTGCTTCACCAGCAG...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATATTTTCAGCAGAGGGTaGTGTGACCTCTTTATTTGG +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHIFSRG*CDLFIW
Trigger: CCAAATAAAGAGGTCACACCACCCTCTGCTGAAAAT...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp AACAGAACTATAACTGAATGCCAACAGGCAGAGACAGTCCTACATATTTGTTTAGGTTCATCTGCTTTATaGCCACCTCTTGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: NRTITECQQAETVLHICLGSSAL*PPLVLL
Trigger: CAACAGGACAAGAGGTGGCCATAAAGCAGATGAACC...TAAACAAATATGTAGGACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATGAAGTGACCACTTTATaGTCACTTCAACATTGCTGC +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHEVTTL*SLQHCC
Trigger: GCAGCAATGTTGAAGTGACCATAAAGTGGTCACTTC...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp ACTCAGGACATTTTGGAATCAACATTGAAAGATGTGCCCTCGTTATCTCAGGGCGTATCTATTTCCTCCTaGTATGCCTATTTTACAGTG +
Preference number: 4 (lower is better)
Translates to: TQDILESTLKDVPSLSQGVSISS*YAYFTV
Trigger: CACTGTAAAATAGGCATACCAGGAGGAAATAGATAC...GCCCTGAGATAACGAGGGCACATCTTTCAATGTTGATTCCAAAATGTCCTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp ACTCAGGACATTTTGGAATCAACATTGAAAGATGTGCCCTCGTTATCTCAGGGCATTATGACAACGCACTaGATCCTTGCTAACAACATT +
Preference number: 4 (lower is better)
Translates to: TQDILESTLKDVPSLSQGIMTTH*ILANNI
Trigger: AATGTTGTTAGCAAGGATCCAGTGCGTTGTCATAAT...GCCCTGAGATAACGAGGGCACATCTTTCAATGTTGATTCCAAAATGTCCTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTGCAGAAGAGTGTGTTTaGAGTTCTAATAGTGACATC +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSAEECV*SSNSDI
Trigger: GATGTCACTATTAGAACTCCAAACACACTCTTCTGC...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTTCAGAGCTCAGAGACTaGGAGATACTTGCACTACTG +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFSELRD*EILALL
Trigger: CAGTAGTGCAAGTATCTCCCAGTCTCTGAGCTCTGA...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTGCATCAAACCCCACATaGATCGTATGCTCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFASNPT*IVCSKS
Trigger: AGACTTTGAGCATACGATTCATGTGGGGTTTGATGC...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTATTTGGTACTGCTGGTaGAGCAATGGATTCAACCAC +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFIWYCW*SNGFNH
Trigger: GTGGTTGAATCCATTGCTTCACCAGCAGTACCAAAT...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp CTCCTCCTGGCTGATGTACTGAGATTAAAAACTCAATGCATTAGTAGCTACAGGAAGTTTCTATTCATTTaGAAGGTAAAGAACCCCCAC +
Preference number: 4 (lower is better)
Translates to: LLLADVLRLKTQCISSYRKFLFI*KVKNPH
Trigger: GTGGGGGTTCTTTACCTTTCAAATGAATAGAAACTT...CCTGTAGCTACTAATGCATTGAGTTTTTAATCTCAGTACATCAGCCAGGAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR TCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTAGTGAATGCACAAAATaGGGGGATTCACTACTGGCT +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFSECTK*GDSLLA
Trigger: AGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACT...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGGGAGTGTGCATCTTTaGGAAACCTTTTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIGSVHL*ETFFFK
Trigger: TTTGAAGAAAAAGGTTTCTCAAAGATGCACACTCCC...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATGGGAGTGTGCATCTTTaGGAAACCTTTTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHGSVHL*ETFFFK
Trigger: TTTGAAGAAAAAGGTTTCTCAAAGATGCACACTCCC...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR TCA 90 bp AACAATCTGGCGTTCAAGTTACTCGATTGTACCAAATGTGAATCCTTCAGCATCAGACTGTATGGAAAATaGAAACTGGGAACAGTCAAC +
Preference number: 4 (lower is better)
Translates to: NNLAFKLLDCTKCESFSIRLYGK*KLGTVN
Trigger: GTTGACTGTTCCCAGTTTTCATTTTCCATACAGTCT...GATGCTGAAGGATTCACATTTGGTACAATCGAGTAACTTGAACGCCAGATTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTCAATGGAGGCTCAGATaGTGTTTTTGTACTCGAAGG +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFQWRLR*CFCTRR
Trigger: CCTTCGAGTACAAAAACAGCATCTGAGCCTCCATTG...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTATCACCTGGTTTGAGTaGAGGAAATCCAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFITWFE*RKSKAC
Trigger: GCAAGCTTTGGATTTCCTGCACTCAAACCAGGTGAT...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp CTCCTCCTGGCTGATGTACTGAGATTAAAAACTCAATGCATTAGTAGCTACAGGTTCCACCATTTCAATTaGCATAATTCCAAGAGACCA +
Preference number: 4 (lower is better)
Translates to: LLLADVLRLKTQCISSYRFHHFN*HNSKRP
Trigger: TGGTCTCTTGGAATTATGGCAATTGAAATGGTGGAA...CCTGTAGCTACTAATGCATTGAGTTTTTAATCTCAGTACATCAGCCAGGAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCTTTAAAAATGGATGCTaGAAAAGCTCCTTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFFKNGC*KSSLAD
Trigger: ATCTGCCAAGGAGCTTTTGCAGCATCCATTTTTAAA...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATACTTAATTGCTTCCTTTaGAGCGATAATCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYILNCFL*SDNQRS
Trigger: ACTCCTCTGATTATCGCTGCAAAGGAAGCAATTAAG...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATGCTGCTGTTCTTAATTaGTTCCTTTGCAGCGATAAT +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHAAVLN*FLCSDN
Trigger: ATTATCGCTGCAAAGGAAGCAATTAAGAACAGCAGC...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp CCAATCACTGTGGGAGTTGTCATCAGAAATGCTATCTTTGGTTCCCAACAAATTGCTGCTGTTCTTAATTaGTTCCTTTGCAGCGATAAT +
Preference number: 4 (lower is better)
Translates to: PITVGVVIRNAIFGSQQIAAVLN*FLCSDN
Trigger: ATTATCGCTGCAAAGGAAGCAATTAAGAACAGCAGC...AATTTGTTGGGAACCAAAGATAGCATTTCTGATGACAACTCCCACAGTGATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGCTGCTGTTCTTAATTaGTTCCTTTGCAGCGATAAT +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIAAVLN*FLCSDN
Trigger: ATTATCGCTGCAAAGGAAGCAATTAAGAACAGCAGC...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTTATGAAGAGGGAGTGTaGATCTTTGAGAAACCTTTT +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSYEEGV*IFEKPF
Trigger: AAAAGGTTTCTCAAAGATGCACACTCCCTCTTCATA...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTTATTTCCTCCTGGTATaGCTATTTTACAGTGCATAT +
Preference number: 4 (lower is better)
Translates to: FLQQSFISVLLMREMVRCYFLLV*LFYSAY
Trigger: ATATGCACTGTAAAATAGGCATACCAGGAGGAAATA...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATACGCACCCGGCCCATTTaGTTGAATTTTAAAAATCAT +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIRTRPI*LNFKNH
Trigger: ATGATTTTTAAAATTCAAGCAAATGGGCCGGGTGCG...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATCCAATTTTGTTATGTTaGAAGTTTGGAGTAATCGTG +
Preference number: 4 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINPILLC*KFGVIV
Trigger: CACGATTACTCCAAACTTCCAACATAACAAAATTGG...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGCCAATTTTGTTATGTTaGAAGTTTGGAGTAATCGTG +
Preference number: 4 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREPILLC*KFGVIV
Trigger: CACGATTACTCCAAACTTCCAACATAACAAAATTGG...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp AACAGAACTATAACTGAATGCCAACAGGCAGAGACAGTCCTACATATTTGTTTATGGTGCGATAACTGGTaGTGGCTCATTTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: NRTITECQQAETVLHICLWCDNW*WLIFIF
Trigger: GAAGATGAAAATGAGCCACCACCAGTTATCGCACCA...TAAACAAATATGTAGGACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTTCTTGGTGCGATAACTaGTGGTGGCTCATTTTCATC +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFSWCDN*WWLIFI
Trigger: GATGAAAATGAGCCACCACCAGTTATCGCACCAAGA...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATCTCTTTATATCTCTATaGATCACCTGGTTTGAGTGC +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHLFISL*ITWFEC
Trigger: GCACTCAAACCAGGTGATCCATAGAGATATAAAGAG...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTACAGGTCTAGAGGTCTaGAAAGGGGAGTTAGTGAAT +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFTGLEV*KGELVN
Trigger: ATTCACTAACTCCCCTTTCCAGACCTCTAGACCTGT...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360648.8
ENST00000417227.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCCCAGGCCCATCAAACTGTCAGTTTACAAATGCTGAATTTCAGTCCTCTTGTTTATCCTTTGGTTAGATaGTCTCCCTTGCTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: SQAHQTVSLQMLNFSPLVYPLVR*SPLLFK
Trigger: TTTAAAGAGCAAGGGAGACCATCTAACCAAAGGATA...AACAAGAGGACTGAAATTCAGCATTTGTAAACTGACAGTTTGATGGGCCTGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGATACTTGCACTACTaGCCATACCTTTGCTTAACT +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHRYLHY*PYLCLT
Trigger: AGTTAAGCAAAGGTATGGCCAGTAGTGCAAGTATCT...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATTGTAGTGGCAAATACTaGCCACAGCTTAATGAAAAC +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHCSGKY*PQLNEN
Trigger: GTTTTCATTAAGCTGTGGCCAGTATTTGCCACTACA...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
3UTR CAA 72 bp AGTTCAACCCAATTAAGTGGCAGTAAATGCTACAAGTaGTATAGAATACTCGTACACACAGGTGTGCACATG +
Preference number: 4 (lower is better)
Translates to: SSTQLSGSKCYK*YRILVHTGVHM
Trigger: CATGTGCACACCTGTGTGTACGAGTATTCTATACAACTTGTAGCATTTACTGCCACTTAATTGGGTTGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATTTCTTCCATCTTTCCTaGAGCAGAGTTTTATTTCAG +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHFFHLS*SRVLFQ
Trigger: CTGAAATAAAACTCTGCTGCAGGAAAGATGGAAGAA...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATATTCTTCCATCTTTCCTaGAGCAGAGTTTTATTTCAG +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIFFHLS*SRVLFQ
Trigger: CTGAAATAAAACTCTGCTGCAGGAAAGATGGAAGAA...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATATATGAAGAGGGAGTGTaGATCTTTGAGAAACCTTTT +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIYEEGV*IFEKPF
Trigger: AAAAGGTTTCTCAAAGATGCACACTCCCTCTTCATA...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp CTCCTCCTGGCTGATGTACTGAGATTAAAAACTCAATGCATTAGTAGCTACAGGCTCAAGACACAGTCATaGACAATCCATATTTCAATT +
Preference number: 4 (lower is better)
Translates to: LLLADVLRLKTQCISSYRLKTQS*TIHISI
Trigger: AATTGAAATATGGATTGTGCATGACTGTGTCTTGAG...CCTGTAGCTACTAATGCATTGAGTTTTTAATCTCAGTACATCAGCCAGGAGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp AACAGAACTATAACTGAATGCCAACAGGCAGAGACAGTCCTACATATTTGTTTAGTTATGTTGGAAGTTTaGAGTAATCGTGCCCATTGC +
Preference number: 4 (lower is better)
Translates to: NRTITECQQAETVLHICLVMLEV*SNRAHC
Trigger: GCAATGGGCACGATTACTCCAAACTTCCAACATAAC...TAAACAAATATGTAGGACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTGTTATGTTGGAAGTTTaGAGTAATCGTGCCCATTGC +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFVMLEV*SNRAHC
Trigger: GCAATGGGCACGATTACTCCAAACTTCCAACATAAC...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTCCAATTTTGTTATGTTaGAAGTTTGGAGTAATCGTG +
Preference number: 4 (lower is better)
Translates to: SFISVLLMREMVRCKACSPILLC*KFGVIV
Trigger: CACGATTACTCCAAACTTCCAACATAACAAAATTGG...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTTTTGTACTCGAAGGATaGGCTGCTATGTATCCATGT +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFFVLEG*AAMYPC
Trigger: ACATGGATACATAGCAGCCCATCCTTCGAGTACAAA...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTTGCGATAACTGGTGGTaGCTCATTTTCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFCDNWW*LIFIFF
Trigger: GAAGAAGATGAAAATGAGCCACCACCAGTTATCGCA...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTATTTTCAGCAGAGGGTaGTGTGACCTCTTTATTTGG +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFIFSRG*CDLFIW
Trigger: CCAAATAAAGAGGTCACACCACCCTCTGCTGAAAAT...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTAACTCTATTAGGGCATaGACTTCCACATGTTCACAC +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFNSIRA*TSTCSH
Trigger: GTGTGAACATGTGGAAGTCCATGCCCTAATAGAGTT...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TCCCAGGCCCATCAAACTGTCAGTTTACAAATGCTGAATTTCAGTCCTCTTGTTAAACTGTTAACAATCTaGCGTTCAAGTTACTCGATT +
Preference number: 4 (lower is better)
Translates to: SQAHQTVSLQMLNFSPLVKLLTI*RSSYSI
Trigger: AATCGAGTAACTTGAACGCCAGATTGTTAACAGTTT...AACAAGAGGACTGAAATTCAGCATTTGTAAACTGACAGTTTGATGGGCCTGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATCCAATTTTGTTATGTTaGAAGTTTGGAGTAATCGTG +
Preference number: 4 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHPILLC*KFGVIV
Trigger: CACGATTACTCCAAACTTCCAACATAACAAAATTGG...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATACCAATTTTGTTATGTTaGAAGTTTGGAGTAATCGTG +
Preference number: 4 (lower is better)
Translates to: STLLPCLGCDSGLQINYIPILLC*KFGVIV
Trigger: CACGATTACTCCAAACTTCCAACATAACAAAATTGG...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp AACAGAACTATAACTGAATGCCAACAGGCAGAGACAGTCCTACATATTTGTTTAATATGGATGGTTAGATaGATGGATGTACCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: NRTITECQQAETVLHICLIWMVR*MDVPWQ
Trigger: TTGCCAAGGTACATCCATCCATCTAACCATCCATAT...TAAACAAATATGTAGGACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTTTCCACCATTTCAATTaGCATAATTCCAAGAGACCA +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFFHHFN*HNSKRP
Trigger: TGGTCTCTTGGAATTATGGCAATTGAAATGGTGGAA...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR GCA 90 bp AACAGAACTATAACTGAATGCCAACAGGCAGAGACAGTCCTACATATTTGTTTATTCTTCCATCTTTCCTaGAGCAGAGTTTTATTTCAG +
Preference number: 4 (lower is better)
Translates to: NRTITECQQAETVLHICLFFHLS*SRVLFQ
Trigger: CTGAAATAAAACTCTGCTGCAGGAAAGATGGAAGAA...TAAACAAATATGTAGGACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp AACAGAACTATAACTGAATGCCAACAGGCAGAGACAGTCCTACATATTTGTTTATTAGATGGTCTCCCTTaGTCTTTAAAAATCACAACT +
Preference number: 4 (lower is better)
Translates to: NRTITECQQAETVLHICLLDGLP*SLKITT
Trigger: AGTTGTGATTTTTAAAGAGCAAGGGAGACCATCTAA...TAAACAAATATGTAGGACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR GCA 90 bp AACAGAACTATAACTGAATGCCAACAGGCAGAGACAGTCCTACATATTTGTTTAGTTCTTTTATTTAACTaGAACATAAGAGACTCAGGC +
Preference number: 4 (lower is better)
Translates to: NRTITECQQAETVLHICLVLLFN*NIRDSG
Trigger: GCCTGAGTCTCTTATGTTGCAGTTAAATAAAAGAAC...TAAACAAATATGTAGGACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CCA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTCCAATTTTGTTATGTTaGAAGTTTGGAGTAATCGTG +
Preference number: 4 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFPILLC*KFGVIV
Trigger: CACGATTACTCCAAACTTCCAACATAACAAAATTGG...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CCA 90 bp AACAGAACTATAACTGAATGCCAACAGGCAGAGACAGTCCTACATATTTGTTTAATTCCCAATGCATGTTaGGTTATATTCATTTGGTCA +
Preference number: 4 (lower is better)
Translates to: NRTITECQQAETVLHICLIPNAC*VIFIWS
Trigger: TGACCAAATGAATATAACCCAACATGCATTGGGAAT...TAAACAAATATGTAGGACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCTGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS CCA 90 bp AGCCGAGGGTTCTGCCCTTCGCTGCTGGGCAGGAGGAGCAGGGGATaGGAGGAGGAGCAGGAACTGGGGGAGGAAGGAGGACCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: SRGFCPSLLGRRSRG*EEEQELGEEGGPEG
Trigger: CCCCTCTGGTCCTCCTTCCTCCCCCAGTTCCTGCTCCTCCTCCCATCCCCTGCTCCTCCTGCCCAGCAGCGAAGGGCAGAACCCTCGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425146.5
ENST00000446737.5
CDS GCA 90 bp CTGGGAACGGCCCTGACACACCCACTTGTCCGCGAACTGGGATCATaGAAACTGCTCGCTTGGTCTCAGGGCTCCGGGGAGCCACGTAGG +
Preference number: 5 (lower is better)
Translates to: LGTALTHPLVRELGS*KLLAWSQGSGEPRR
Trigger: CCTACGTGGCTCCCCGGAGCCCTGAGACCAAGCGAGCAGTTTGCATGATCCCAGTTCGCGGACAAGTGGGTGTGTCAGGGCCGTTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484442.5
CDS CCA 90 bp TTCACAGCTCCTCACACCGCCACCGCTGCAGGACTTCAGCACAGGTaGGCACTGCCCATGAGAAGGGTCCGGGCTGGCTTCAGCTCCTAC +
Preference number: 5 (lower is better)
Translates to: FTAPHTATAAGLQHR*ALPMRRVRAGFSSY
Trigger: GTAGGAGCTGAAGCCAGCCCGGACCCTTCTCATGGGCAGTGCCCACCTGTGCTGAAGTCCTGCAGCGGTGGCGGTGTGAGGAGCTGTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000518291.5
ENST00000519681.5
CDS CCA 90 bp AGGACTTCAGCACAGGTGGGCACTGCCCATGAGAAGGGTCCGGGCTaGCTTCAGCTCCTACAGACTCAGTGCTGGGCACACCAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: RTSAQVGTAHEKGPG*LQLLQTQCWAHQLP
Trigger: TGGCAGCTGGTGTGCCCAGCACTGAGTCTGTAGGAGCTGAAGCCAGCCCGGACCCTTCTCATGGGCAGTGCCCACCTGTGCTGAAGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000518291.5
ENST00000519681.5
CDS CCA 90 bp ACACACCCACTTGTCCGCGAACTGGGATCATGCAAACTGCTCGCTTaGTCTCAGGGCTCCGGGGAGCCACGTAGGAGACTCGAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: THPLVRELGSCKLLA*SQGSGEPRRRLEAA
Trigger: GGCAGCCTCGAGTCTCCTACGTGGCTCCCCGGAGCCCTGAGACCAAGCGAGCAGTTTGCATGATCCCAGTTCGCGGACAAGTGGGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484442.5
CDS GCA 90 bp GCCCATGAGAAGGGTCCGGGCTGGCTTCAGCTCCTACAGACTCAGTaGTGGGCACACCAGCTGCCACAAGATGCAAGGACTCAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: AHEKGPGWLQLLQTQ*WAHQLPQDARTQLL
Trigger: GAGCAGCTGAGTCCTTGCATCTTGTGGCAGCTGGTGTGCCCAGCACTGAGTCTGTAGGAGCTGAAGCCAGCCCGGACCCTTCTCATGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000518291.5
ENST00000519681.5
CDS GCA 90 bp CGGGCTGGCTTCAGCTCCTACAGACTCAGTGCTGGGCACACCAGCTaGCACAAGATGCAAGGACTCAGCTGCTCTTTCTTGGGGGAAACC +
Preference number: 5 (lower is better)
Translates to: RAGFSSYRLSAGHTS*HKMQGLSCSFLGET
Trigger: GGTTTCCCCCAAGAAAGAGCAGCTGAGTCCTTGCATCTTGTGGCAGCTGGTGTGCCCAGCACTGAGTCTGTAGGAGCTGAAGCCAGCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000518291.5
ENST00000519681.5
CDS CCA 90 bp CATGAGAAGGGTCCGGGCTGGCTTCAGCTCCTACAGACTCAGTGCTaGGCACACCAGCTGCCACAAGATGCAAGGACTCAGCTGCTCTTT +
Preference number: 5 (lower is better)
Translates to: HEKGPGWLQLLQTQC*AHQLPQDARTQLLF
Trigger: AAAGAGCAGCTGAGTCCTTGCATCTTGTGGCAGCTGGTGTGCCCAGCACTGAGTCTGTAGGAGCTGAAGCCAGCCCGGACCCTTCTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000518291.5
ENST00000519681.5
CDS TCA 90 bp CTCTTCAGGGGCCATGGGAAGTGGTTTGGAGCTGTGGTTGAGTGCTaGAGAATCCCGGTTGTTACTATTCATCCTCAGTGGAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: LFRGHGKWFGAVVEC*RIPVVTIHPQWRSR
Trigger: CCGGCTCCTCCACTGAGGATGAATAGTAACAACCGGGATTCTTCAGCACTCAACCACAGCTCCAAACCACTTCCCATGGCCCCTGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000429193.5
ENST00000446737.5
ENST00000518291.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GCAGGGCATTGGGACCATCCACTAACTCCCAGTTTACCCTCTTTCCAGCAGTGTTGCTGCAAAAGCTCCTaGGCAGATCCTCGCCTATCC +
Preference number: 5 (lower is better)
Translates to: AGHWDHPLTPSLPSFQQCCCKSS*ADPRLS
Trigger: GGATAGGCGAGGATCTGCCAAGGAGCTTTTGCAGCA...ACACTGCTGGAAAGAGGGTAAACTGGGAGTTAGTGGATGGTCCCAATGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS CCA 90 bp CTTGCTCATCCCAGAACAGGGCCACGGTGTTGTCACCAACAGGAATaGACCTCCTTCTGTTCCAATACCTCAGACAGCCATACACTTGGC +
Preference number: 5 (lower is better)
Translates to: LAHPRTGPRCCHQQE*TSFCSNTSDSHTLG
Trigger: GCCAAGTGTATGGCTGTCTGAGGTATTGGAACAGAAGGAGGTCCATTCCTGTTGGTGACAACACCGTGGCCCTGTTCTGGGATGAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000484442.5
ENST00000518291.5
ENST00000519681.5
CDS-3UTR CAA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACTGCACTCAGGGCTGGTaGGCACTCTGCTGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYCTQGW*ALCCRQ
Trigger: CTGCCTACAGCAGAGTGCCAACCAGCCCTGAGTGCA...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCATGGTCACTTCAACATaGCTGCCCTGTTTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVMVTST*LPCLGC
Trigger: GCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACTGCTGCAAAAGCTCCTaGGCAGATCCTCGCCTATCC +
Preference number: 5 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYCCKSS*ADPRLS
Trigger: GGATAGGCGAGGATCTGCCAAGGAGCTTTTGCAGCA...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTAACAGGGCCACGGTGTaGTCACCAACAGGAATGGAC +
Preference number: 5 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTNRATV*SPTGMD
Trigger: GTCCATTCCTGTTGGTGACAACACCGTGGCCCTGTT...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CAA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAGGTTTGGAGCTGTGGTaGAGTGCTGAAGAATCCCGG +
Preference number: 5 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIGLELW*SAEESR
Trigger: CCGGGATTCTTCAGCACTCAACCACAGCTCCAAACC...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCCCACCTCTTGTCCTGTaGCAATGTCTAGTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVPPLVL*QCLVLY
Trigger: ATACAGCACTAGACATTGCAACAGGACAAGAGGTGG...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATATGCTGCAAAAGCTCCTaGGCAGATCCTCGCCTATCC +
Preference number: 5 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQICCKSS*ADPRLS
Trigger: GGATAGGCGAGGATCTGCCAAGGAGCTTTTGCAGCA...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTTTCCCTCTGATTGACTaGAAGCGACCGTCACAGGTC +
Preference number: 5 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTFPLID*KRPSQV
Trigger: GACCTGTGACGGTCGCTTCAAGTCAATCAGAGGGAA...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360648.8
ENST00000417227.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACACTTGGCCTGGATTaGAGTCTGCAAAACCATGAG +
Preference number: 5 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVTLGLD*SLQNHE
Trigger: CTCATGGTTTTGCAGACTCAAATCCAGGCCAAGTGT...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CAA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAACAGGGCCACGGTGTaGTCACCAACAGGAATGGAC +
Preference number: 5 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQINRATV*SPTGMD
Trigger: GTCCATTCCTGTTGGTGACAACACCGTGGCCCTGTT...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTGCTGTAGGCAGGGCATaGGGACCATCCACTAACTCC +
Preference number: 5 (lower is better)
Translates to: FLQQSFISVLLMREMVRCAVGRA*GPSTNS
Trigger: GGAGTTAGTGGATGGTCCCAATGCCCTGCCTACAGC...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGTGTTCCAGCCTCTTCTaGGTCAGAGCGAAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: ALFGLRFRLTNKLHNLRECSSLF*VRAKEG
Trigger: GCCCTCCTTCGCTCTGACCAAGAAGAGGCTGGAACA...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425146.5
ENST00000446737.5
CDS TCA 90 bp TATTCTTCTCTTCAGGGGCCATGGGAAGTGGTTTGGAGCTGTGGTTaGGTGCTGAAGAATCCCGGTTGTTACTATTCATCCTCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: YSSLQGPWEVVWSCG*VLKNPGCYYSSSVE
Trigger: CTCCACTGAGGATGAATAGTAACAACCGGGATTCTTCAGCACTCAACCACAGCTCCAAACCACTTCCCATGGCCCCTGAAGAGAAGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000429193.5
ENST00000446737.5
ENST00000518291.5
ENST00000519681.5
CDS TCA 90 bp CCTTCTGTTCCAATACCTCAGACAGCCATACACTTGGCCTGGATTTaGGTCTGCAAAACCATGAGGGGAGCAAGACTAACATGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: PSVPIPQTAIHLAWI*VCKTMRGARLTWPS
Trigger: AGAAGGCCATGTTAGTCTTGCTCCCCTCATGGTTTTGCAGACTCAAATCCAGGCCAAGTGTATGGCTGTCTGAGGTATTGGAACAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATGGTTTGGAGCTGTGGTaGAGTGCTGAAGAATCCCGG +
Preference number: 5 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINGLELW*SAEESR
Trigger: CCGGGATTCTTCAGCACTCAACCACAGCTCCAAACC...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGGGTTTGGAGCTGTGGTaGAGTGCTGAAGAATCCCGG +
Preference number: 5 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREGLELW*SAEESR
Trigger: CCGGGATTCTTCAGCACTCAACCACAGCTCCAAACC...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GCAGGGCATTGGGACCATCCACTAACTCCCAGTTTACCCTCTTTCCAGCAGTGTTTCTCCTTCTTCTTATaGGTTTTATCCCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: AGHWDHPLTPSLPSFQQCFSFFL*VLSPPP
Trigger: AGGAGGAGGGGATAAAACCAATAAGAAGAAGGAGAA...ACACTGCTGGAAAGAGGGTAAACTGGGAGTTAGTGGATGGTCCCAATGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACGCTCAGATGCTGTTTTaGTACTCGAAGGATGGGCTG +
Preference number: 5 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYAQMLF*YSKDGL
Trigger: CAGCCCATCCTTCGAGTACAAAAACAGCATCTGAGC...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCTATGGATCACCTGGTTaGAGTGCAGGAAATCCAAAG +
Preference number: 5 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVYGSPG*SAGNPK
Trigger: CTTTGGATTTCCTGCACTCAAACCAGGTGATCCATA...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTGCTGCAAAAGCTCCTaGGCAGATCCTCGCCTATCC +
Preference number: 5 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINCCKSS*ADPRLS
Trigger: GGATAGGCGAGGATCTGCCAAGGAGCTTTTGCAGCA...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAACATTGCTGCCCTGTTaGGGCTGCGATTCAGGCTTA +
Preference number: 5 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQITLLPC*GCDSGL
Trigger: TAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGT...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAATGGTCACTTCAACATaGCTGCCCTGTTTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIMVTST*LPCLGC
Trigger: GCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGAACAGGGCCACGGTGTaGTCACCAACAGGAATGGAC +
Preference number: 5 (lower is better)
Translates to: ALFGLRFRLTNKLHNLRENRATV*SPTGMD
Trigger: GTCCATTCCTGTTGGTGACAACACCGTGGCCCTGTT...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CAA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACATGGATGGATGTACCTaGGCAAAGAAGGAGAGAGGC +
Preference number: 5 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYMDGCT*AKKERG
Trigger: GCCTCTCTCCTTCTTTGCCAAGGTACATCCATCCAT...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp GCAGGGCATTGGGACCATCCACTAACTCCCAGTTTACCCTCTTTCCAGCAGTGTAGCAACATCAAAGATTaGGATAGACTCACCTGTGTC +
Preference number: 5 (lower is better)
Translates to: AGHWDHPLTPSLPSFQQCSNIKD*DRLTCV
Trigger: GACACAGGTGAGTCTATCCAAATCTTTGATGTTGCT...ACACTGCTGGAAAGAGGGTAAACTGGGAGTTAGTGGATGGTCCCAATGCCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCGCACACACATTGAACTaGAATTTTGCACTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVAHTLN*NFALRA
Trigger: AGCCCTGAGTGCAAAATTCAAGTTCAATGTGTGTGC...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCTGTTCCAGCCTCTTCTaGGTCAGAGCGAAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFCSSLF*VRAKEG
Trigger: GCCCTCCTTCGCTCTGACCAAGAAGAGGCTGGAACA...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425146.5
ENST00000446737.5
CDS TCA 90 bp CTGCTCATTGAGTTTCTTGTTCTCTTGGTTAAAGCTACTGGTTCCTaGAGGTGGGTTACGTGGGTGGGGATGCTTTACACCTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: LLIEFLVLLVKATGS*RWVTWVGMLYTLLI
Trigger: GATGAGCAAGGTGTAAAGCATCCCCACCCACGTAACCCACCTTCAGGAACCAGTAGCTTTAACCAAGAGAACAAGAAACTCAATGAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484442.5
CDS CCA 90 bp TTCTTCTTCCTCTTCATCTTCTTCTTCAGACACAGGAGGGGCCAATaGAGGCTCAGATGCTGTTTTTGTACTCGAAGGATGGGCTGCTAT +
Preference number: 5 (lower is better)
Translates to: FFFLFIFFFRHRRGQ*RLRCCFCTRRMGCY
Trigger: ATAGCAGCCCATCCTTCGAGTACAAAAACAGCATCTGAGCCTCCATTGGCCCCTCCTGTGTCTGAAGAAGAAGATGAAGAGGAAGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000518291.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCGGTTTGGAGCTGTGGTaGAGTGCTGAAGAATCCCGG +
Preference number: 5 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFGLELW*SAEESR
Trigger: CCGGGATTCTTCAGCACTCAACCACAGCTCCAAACC...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAGCTCAGATGCTGTTTTaGTACTCGAAGGATGGGCTG +
Preference number: 5 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIAQMLF*YSKDGL
Trigger: CAGCCCATCCTTCGAGTACAAAAACAGCATCTGAGC...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTACATTGCTGCCCTGTTaGGGCTGCGATTCAGGCTTA +
Preference number: 5 (lower is better)
Translates to: FLQQSFISVLLMREMVRCTLLPC*GCDSGL
Trigger: TAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGT...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGACATTGCTGCCCTGTTaGGGCTGCGATTCAGGCTTA +
Preference number: 5 (lower is better)
Translates to: ALFGLRFRLTNKLHNLRETLLPC*GCDSGL
Trigger: TAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGT...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATACATTGCTGCCCTGTTaGGGCTGCGATTCAGGCTTA +
Preference number: 5 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINTLLPC*GCDSGL
Trigger: TAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGT...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGATGGTCACTTCAACATaGCTGCCCTGTTTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREMVTST*LPCLGC
Trigger: GCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATATGGTCACTTCAACATaGCTGCCCTGTTTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINMVTST*LPCLGC
Trigger: GCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTTTCCCTCTGATTGACTaGAAGCGACCGTCACAGGTC +
Preference number: 5 (lower is better)
Translates to: FLQQSFISVLLMREMVRCFPLID*KRPSQV
Trigger: GACCTGTGACGGTCGCTTCAAGTCAATCAGAGGGAA...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360648.8
ENST00000417227.5
ENST00000519681.5
CDS-3UTR CAA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATACTCAGCTGCTCTTTCTaGGGGGAAACCTTTACACCT +
Preference number: 5 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQILSCSF*GETFTP
Trigger: AGGTGTAAAGGTTTCCCCCAAGAAAGAGCAGCTGAG...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTGATTTGAGGGGATaGTGTCATCTGAAAATCCTC +
Preference number: 5 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVTDLRG*CHLKIL
Trigger: GAGGATTTTCAGATGACACAATCCCCTCAAATCAGT...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp GCAGGGCATTGGGACCATCCACTAACTCCCAGTTTACCCTCTTTCCAGCAGTGTGTGGGACTTGCCCTATaGGTTATTAAAAGAAGAATC +
Preference number: 5 (lower is better)
Translates to: AGHWDHPLTPSLPSFQQCVGLAL*VIKRRI
Trigger: GATTCTTCTTTTAATAACCAATAGGGCAAGTCCCAC...ACACTGCTGGAAAGAGGGTAAACTGGGAGTTAGTGGATGGTCCCAATGCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS CCA 90 bp TTCTTATTCTTCTCTTCAGGGGCCATGGGAAGTGGTTTGGAGCTGTaGTTGAGTGCTGAAGAATCCCGGTTGTTACTATTCATCCTCAGT +
Preference number: 5 (lower is better)
Translates to: FLFFSSGAMGSGLEL*LSAEESRLLLFILS
Trigger: ACTGAGGATGAATAGTAACAACCGGGATTCTTCAGCACTCAACCACAGCTCCAAACCACTTCCCATGGCCCCTGAAGAGAAGAATAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000429193.5
ENST00000446737.5
ENST00000518291.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGGTTTGGAGCTGTGGTaGAGTGCTGAAGAATCCCGG +
Preference number: 5 (lower is better)
Translates to: STLLPCLGCDSGLQINYIGLELW*SAEESR
Trigger: CCGGGATTCTTCAGCACTCAACCACAGCTCCAAACC...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTGCTCAGATGCTGTTTTaGTACTCGAAGGATGGGCTG +
Preference number: 5 (lower is better)
Translates to: FLQQSFISVLLMREMVRCAQMLF*YSKDGL
Trigger: CAGCCCATCCTTCGAGTACAAAAACAGCATCTGAGC...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGGCTCAGATGCTGTTTTaGTACTCGAAGGATGGGCTG +
Preference number: 5 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREAQMLF*YSKDGL
Trigger: CAGCCCATCCTTCGAGTACAAAAACAGCATCTGAGC...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCGAGTATAGATTGATTTaGTATGCTCTGGTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVEYRLI*YALVLV
Trigger: CACCAAGACCAGAGCATACAAAATCAATCTATACTC...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATATGCTGCAAAAGCTCCTaGGCAGATCCTCGCCTATCC +
Preference number: 5 (lower is better)
Translates to: STLLPCLGCDSGLQINYICCKSS*ADPRLS
Trigger: GGATAGGCGAGGATCTGCCAAGGAGCTTTTGCAGCA...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATTGCTGCAAAAGCTCCTaGGCAGATCCTCGCCTATCC +
Preference number: 5 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHCCKSS*ADPRLS
Trigger: GGATAGGCGAGGATCTGCCAAGGAGCTTTTGCAGCA...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCACATTGCTGCCCTGTTaGGGCTGCGATTCAGGCTTA +
Preference number: 5 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFTLLPC*GCDSGL
Trigger: TAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGT...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTATGGTCACTTCAACATaGCTGCCCTGTTTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: SFISVLLMREMVRCKACSMVTST*LPCLGC
Trigger: GCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTGGAAACCTTTACACCTaGCTCATCCCAGAACAGGGC +
Preference number: 5 (lower is better)
Translates to: SFISVLLMREMVRCKACSGNLYT*LIPEQG
Trigger: GCCCTGTTCTGGGATGAGCAAGGTGTAAAGGTTTCC...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATCTCAGCTGCTCTTTCTaGGGGGAAACCTTTACACCT +
Preference number: 5 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINLSCSF*GETFTP
Trigger: AGGTGTAAAGGTTTCCCCCAAGAAAGAGCAGCTGAG...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGCTCAGCTGCTCTTTCTaGGGGGAAACCTTTACACCT +
Preference number: 5 (lower is better)
Translates to: ALFGLRFRLTNKLHNLRELSCSF*GETFTP
Trigger: AGGTGTAAAGGTTTCCCCCAAGAAAGAGCAGCTGAG...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CAA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTACACTTGGCCTGGATTaGAGTCCTTCTCTCCTTCGC +
Preference number: 5 (lower is better)
Translates to: SFISVLLMREMVRCKACSTLGLD*SPSLLR
Trigger: GCGAAGGAGAGAAGGACTCAAATCCAGGCCAAGTGT...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTCAACGCACTGGATCCTaGCTAACAACATTAACGTTC +
Preference number: 5 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTQRTGS*LTTLTF
Trigger: GAACGTTAATGTTGTTAGCAAGGATCCAGTGCGTTG...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGGAGACTGGGAGATACTaGCACTACTGGCCATACCTT +
Preference number: 5 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREETGRY*HYWPYL
Trigger: AAGGTATGGCCAGTAGTGCAAGTATCTCCCAGTCTC...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCAATACACGTTCAGAATaGTGTGCTGAGTTCACTTCA +
Preference number: 5 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVNTRSE*CAEFTS
Trigger: TGAAGTGAACTCAGCACACAATTCTGAACGTGTATT...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTTTCTCCTTCTTCTTATaGGTTTTATCCCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTFSFFL*VLSPPP
Trigger: AGGAGGAGGGGATAAAACCAATAAGAAGAAGGAGAA...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCGCTCAGATGCTGTTTTaGTACTCGAAGGATGGGCTG +
Preference number: 5 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFAQMLF*YSKDGL
Trigger: CAGCCCATCCTTCGAGTACAAAAACAGCATCTGAGC...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTGCTCAGATGCTGTTTTaGTACTCGAAGGATGGGCTG +
Preference number: 5 (lower is better)
Translates to: SFISVLLMREMVRCKACSAQMLF*YSKDGL
Trigger: CAGCCCATCCTTCGAGTACAAAAACAGCATCTGAGC...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTCCACCTCTTGTCCTGTaGCAATGTCTAGTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: FLQQSFISVLLMREMVRCPPLVL*QCLVLY
Trigger: ATACAGCACTAGACATTGCAACAGGACAAGAGGTGG...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATCCACCTCTTGTCCTGTaGCAATGTCTAGTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINPPLVL*QCLVLY
Trigger: ATACAGCACTAGACATTGCAACAGGACAAGAGGTGG...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGCCACCTCTTGTCCTGTaGCAATGTCTAGTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREPPLVL*QCLVLY
Trigger: ATACAGCACTAGACATTGCAACAGGACAAGAGGTGG...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATATATGGATCACCTGGTTaGAGTGCAGGAAATCCAAAG +
Preference number: 5 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIYGSPG*SAGNPK
Trigger: CTTTGGATTTCCTGCACTCAAACCAGGTGATCCATA...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GGGGATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCGAAGTTTCTATTCATTaGAAAGGTAAAGAACCCCCA +
Preference number: 5 (lower is better)
Translates to: GDSLLALSLHGGSDHFMVEVSIH*KGKEPP
Trigger: TGGGGGTTCTTTACCTTTCAAATGAATAGAAACTTC...GACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATACATTGCTGCCCTGTTaGGGCTGCGATTCAGGCTTA +
Preference number: 5 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHTLLPC*GCDSGL
Trigger: TAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGT...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAACATTGCTGCCCTGTTaGGGCTGCGATTCAGGCTTA +
Preference number: 5 (lower is better)
Translates to: STLLPCLGCDSGLQINYITLLPC*GCDSGL
Trigger: TAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGT...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATGGTCACTTCAACATaGCTGCCCTGTTTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: STLLPCLGCDSGLQINYIMVTST*LPCLGC
Trigger: GCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGGAAACCTTTACACCTaGCTCATCCCAGAACAGGGC +
Preference number: 5 (lower is better)
Translates to: STLLPCLGCDSGLQINYIGNLYT*LIPEQG
Trigger: GCCCTGTTCTGGGATGAGCAAGGTGTAAAGGTTTCC...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS TCA 90 bp TTTCACAGCTCCTCAAGTCATTCCATGTTGGGCGAACTGAACTTCTaGCTCCTCAGAAGAGAAAGCTGTCCTCTGTATGTTATTCTGTTC +
Preference number: 5 (lower is better)
Translates to: FHSSSSHSMLGELNF*LLRRESCPLYVILF
Trigger: GAACAGAATAACATACAGAGGACAGCTTTCTCTTCTGAGGAGTCAGAAGTTCAGTTCGCCCAACATGGAATGACTTGAGGAGCTGTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446737.5
CDS-3UTR CAA 90 bp AACAGAACTATAACTGAATGCCAACAGGCAGAGACAGTCCTACATATTTGTTTAGGTTTGGAGCTGTGGTaGAGTGCTGAAGAATCCCGG +
Preference number: 5 (lower is better)
Translates to: NRTITECQQAETVLHICLGLELW*SAEESR
Trigger: CCGGGATTCTTCAGCACTCAACCACAGCTCCAAACC...TAAACAAATATGTAGGACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTGGTTTGGAGCTGTGGTaGAGTGCTGAAGAATCCCGG +
Preference number: 5 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFGLELW*SAEESR
Trigger: CCGGGATTCTTCAGCACTCAACCACAGCTCCAAACC...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATATTCTCCTTCTTCTTATaGGTTTTATCCCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIFSFFL*VLSPPP
Trigger: AGGAGGAGGGGATAAAACCAATAAGAAGAAGGAGAA...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATGCTCAGATGCTGTTTTaGTACTCGAAGGATGGGCTG +
Preference number: 5 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHAQMLF*YSKDGL
Trigger: CAGCCCATCCTTCGAGTACAAAAACAGCATCTGAGC...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GATTCACTACTGGCTCTTTCGCTTCACGGTGGAAGTGACCACTTTATGGTCACTCAGAACGAGTATAGATaGATTTTGTATGCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: DSLLALSLHGGSDHFMVTQNEYR*ILYALV
Trigger: GACCAGAGCATACAAAATCAATCTATACTCGTTCTG...AGTGACCATAAAGTGGTCACTTCCACCGTGAAGCGAAAGAGCCAGTAGTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACCAGAACGAGTATAGATaGATTTTGTATGCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYQNEYR*ILYALV
Trigger: GACCAGAGCATACAAAATCAATCTATACTCGTTCTG...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTATGGATCACCTGGTTaGAGTGCAGGAAATCCAAAG +
Preference number: 5 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINYGSPG*SAGNPK
Trigger: CTTTGGATTTCCTGCACTCAAACCAGGTGATCCATA...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAGTTTTGAAGGAGGTTaGAATGCAAGAGGGACTACT +
Preference number: 5 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQISFEGG*NARGTT
Trigger: AGTAGTCCCTCTTGCATTCAAACCTCCTTCAAAACT...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCACACTTGGCCTGGATTaGAGTCTGCAAAACCATGAG +
Preference number: 5 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFTLGLD*SLQNHE
Trigger: CTCATGGTTTTGCAGACTCAAATCCAGGCCAAGTGT...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372010.5
ENST00000519681.5
CDS-3UTR CAA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACGCTGTTGATTTCCTCTaGGGTACTAAATCTGTTGAA +
Preference number: 5 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYAVDFL*GTKSVE
Trigger: TTCAACAGATTTAGTACCCAAGAGGAAATCAACAGC...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATATCTCTACTATCGCTGTaGATTTCCTCTTGGGTACTA +
Preference number: 5 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQISLLSL*ISSWVL
Trigger: TAGTACCCAAGAGGAAATCAACAGCGATAGTAGAGA...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp CCATACCAAAGCAGAGGGCAGACAACCTGTTTTAAAGCAGAAGAGTGTGTTTGGCAATCACTGTGGGAGTaGTCATCAGAAATGCTATCT +
Preference number: 5 (lower is better)
Translates to: PYQSRGQTTCFKAEECVWQSLWE*SSEMLS
Trigger: AGATAGCATTTCTGATGACAACTCCCACAGTGATTG...CCAAACACACTCTTCTGCTTTAAAACAGGTTGTCTGCCCTCTGCTTTGGTATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS TCA 90 bp ACAACTAATTTCACAGCTCCTCAAGTCATTCCATGTTGGGCGAACTaGACTTCTGACTCCTCAGAAGAGAAAGCTGTCCTCTGTATGTTA +
Preference number: 5 (lower is better)
Translates to: TTNFTAPQVIPCWAN*TSDSSEEKAVLCML
Trigger: TAACATACAGAGGACAGCTTTCTCTTCTGAGGAGTCAGAAGTTCAGTTCGCCCAACATGGAATGACTTGAGGAGCTGTGAAATTAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446737.5
CDS CCA 90 bp CTAGAACAGCTTGTGGGTTCTTCTTCTGTTCCAATTTTGTTATGTTaGAAGTTTGGAGTAATCGTGCCCATTGCTCTGGAATTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: LEQLVGSSSVPILLC*KFGVIVPIALEFPL
Trigger: CAGAGGGAATTCCAGAGCAATGGGCACGATTACTCCAAACTTCCAACATAACAAAATTGGAACAGAAGAAGAACCCACAAGCTGTTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372010.5
ENST00000429193.5
ENST00000518291.5
CDS-3UTR CAA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCGCTGAAGAATCCCGGTaGTTACTATTCATCCTCAGT +
Preference number: 5 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFAEESR*LLFILS
Trigger: ACTGAGGATGAATAGTAACAACCGGGATTCTTCAGC...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTGCTGAAGAATCCCGGTaGTTACTATTCATCCTCAGT +
Preference number: 5 (lower is better)
Translates to: SFISVLLMREMVRCKACSAEESR*LLFILS
Trigger: ACTGAGGATGAATAGTAACAACCGGGATTCTTCAGC...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTTTCTCCTTCTTCTTATaGGTTTTATCCCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: FLQQSFISVLLMREMVRCFSFFL*VLSPPP
Trigger: AGGAGGAGGGGATAAAACCAATAAGAAGAAGGAGAA...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTTCTCCTTCTTCTTATaGGTTTTATCCCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINFSFFL*VLSPPP
Trigger: AGGAGGAGGGGATAAAACCAATAAGAAGAAGGAGAA...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp ATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAGAGTATAGATTGATTTaGTATGCTCTGGTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: MVTSTLLPCLGCDSGLQIEYRLI*YALVLV
Trigger: CACCAAGACCAGAGCATACAAAATCAATCTATACTC...TATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp AACAATCTGGCGTTCAAGTTACTCGATTGTACCAAATGTGAATCCTTCAGCATCCCACCTCTTGTCCTGTaGCAATGTCTAGTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: NNLAFKLLDCTKCESFSIPPLVL*QCLVLY
Trigger: ATACAGCACTAGACATTGCAACAGGACAAGAGGTGG...GATGCTGAAGGATTCACATTTGGTACAATCGAGTAACTTGAACGCCAGATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATACCACCTCTTGTCCTGTaGCAATGTCTAGTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: STLLPCLGCDSGLQINYIPPLVL*QCLVLY
Trigger: ATACAGCACTAGACATTGCAACAGGACAAGAGGTGG...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATCCACCTCTTGTCCTGTaGCAATGTCTAGTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHPPLVL*QCLVLY
Trigger: ATACAGCACTAGACATTGCAACAGGACAAGAGGTGG...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTTATGGATCACCTGGTTaGAGTGCAGGAAATCCAAAG +
Preference number: 5 (lower is better)
Translates to: SFISVLLMREMVRCKACSYGSPG*SAGNPK
Trigger: CTTTGGATTTCCTGCACTCAAACCAGGTGATCCATA...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCTATGGATCACCTGGTTaGAGTGCAGGAAATCCAAAG +
Preference number: 5 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFYGSPG*SAGNPK
Trigger: CTTTGGATTTCCTGCACTCAAACCAGGTGATCCATA...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp ACTTTATGGTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACGAAGTTTCTATTCATTaGAAAGGTAAAGAACCCCCA +
Preference number: 5 (lower is better)
Translates to: TLWSLQHCCPVWAAIQAYEVSIH*KGKEPP
Trigger: TGGGGGTTCTTTACCTTTCAAATGAATAGAAACTTC...GTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGACCATAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTACATTGCTGCCCTGTTaGGGCTGCGATTCAGGCTTA +
Preference number: 5 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFTLLPC*GCDSGL
Trigger: TAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGT...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGAGTTTTGAAGGAGGTTaGAATGCAAGAGGGACTACT +
Preference number: 5 (lower is better)
Translates to: ALFGLRFRLTNKLHNLRESFEGG*NARGTT
Trigger: AGTAGTCCCTCTTGCATTCAAACCTCCTTCAAAACT...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATAGTTTTGAAGGAGGTTaGAATGCAAGAGGGACTACT +
Preference number: 5 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINSFEGG*NARGTT
Trigger: AGTAGTCCCTCTTGCATTCAAACCTCCTTCAAAACT...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GTCACTTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTCTCAGTTCCCGCATTaGCAGATTCAGTTAGACATT +
Preference number: 5 (lower is better)
Translates to: VTSTLLPCLGCDSGLQINSQFPH*QIQLDI
Trigger: AATGTCTAACTGAATCTGCAAATGCGGGAACTGAGA...ATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTAATCTGTTGAACATGTaGCCAGGCTTACTGCTGGTA +
Preference number: 5 (lower is better)
Translates to: SFISVLLMREMVRCKACSNLLNM*PGLLLV
Trigger: TACCAGCAGTAAGCCTGGCAACATGTTCAACAGATT...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp AACAATCTGGCGTTCAAGTTACTCGATTGTACCAAATGTGAATCCTTCAGCATCGCTGAAGAATCCCGGTaGTTACTATTCATCCTCAGT +
Preference number: 5 (lower is better)
Translates to: NNLAFKLLDCTKCESFSIAEESR*LLFILS
Trigger: ACTGAGGATGAATAGTAACAACCGGGATTCTTCAGC...GATGCTGAAGGATTCACATTTGGTACAATCGAGTAACTTGAACGCCAGATTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGCTGAAGAATCCCGGTaGTTACTATTCATCCTCAGT +
Preference number: 5 (lower is better)
Translates to: STLLPCLGCDSGLQINYIAEESR*LLFILS
Trigger: ACTGAGGATGAATAGTAACAACCGGGATTCTTCAGC...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCCTGCAGCAGAGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTCAGAACGAGTATAGATaGATTTTGTATGCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: FLQQSFISVLLMREMVRCQNEYR*ILYALV
Trigger: GACCAGAGCATACAAAATCAATCTATACTCGTTCTG...ACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACTCTGCTGCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGCAGAACGAGTATAGATaGATTTTGTATGCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREQNEYR*ILYALV
Trigger: GACCAGAGCATACAAAATCAATCTATACTCGTTCTG...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATTATGGATCACCTGGTTaGAGTGCAGGAAATCCAAAG +
Preference number: 5 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHYGSPG*SAGNPK
Trigger: CTTTGGATTTCCTGCACTCAAACCAGGTGATCCATA...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCAGTTTTGAAGGAGGTTaGAATGCAAGAGGGACTACT +
Preference number: 5 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFSFEGG*NARGTT
Trigger: AGTAGTCCCTCTTGCATTCAAACCTCCTTCAAAACT...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp CCAATCACTGTGGGAGTTGTCATCAGAAATGCTATCTTTGGTTCCCAACAAATTGAAGGAAGTTATCCTTaGGTTAGATGGTCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: PITVGVVIRNAIFGSQQIEGSYP*VRWSPL
Trigger: CAAGGGAGACCATCTAACCAAAGGATAACTTCCTTC...AATTTGTTGGGAACCAAAGATAGCATTTCTGATGACAACTCCCACAGTGATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGCATTCCCAATGCATGTaGGGTTATATTCATTTGGTC +
Preference number: 5 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREHSQCM*GYIHLV
Trigger: GACCAAATGAATATAACCCAACATGCATTGGGAATG...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS CCA 90 bp CTAGAACAGCTTGTGGGTTCTTCTTCTGTTCCAATTTTGTTATGTTaGAAGTTTGGAGTAATCGTGCCCATTGCTCTGGAATTCCCATTT +
Preference number: 5 (lower is better)
Translates to: LEQLVGSSSVPILLC*KFGVIVPIALEFPF
Trigger: AAATGGGAATTCCAGAGCAATGGGCACGATTACTCCAAACTTCCAACATAACAAAATTGGAACAGAAGAAGAACCCACAAGCTGTTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417227.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCGAGTATAGATTGATTTaGTATGCTCTGGTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFEYRLI*YALVLV
Trigger: CACCAAGACCAGAGCATACAAAATCAATCTATACTC...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCCAGAACGAGTATAGATaGATTTTGTATGCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFQNEYR*ILYALV
Trigger: GACCAGAGCATACAAAATCAATCTATACTCGTTCTG...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp CCAATCACTGTGGGAGTTGTCATCAGAAATGCTATCTTTGGTTCCCAACAAATTAGTTTTGAAGGAGGTTaGAATGCAAGAGGGACTACT +
Preference number: 5 (lower is better)
Translates to: PITVGVVIRNAIFGSQQISFEGG*NARGTT
Trigger: AGTAGTCCCTCTTGCATTCAAACCTCCTTCAAAACT...AATTTGTTGGGAACCAAAGATAGCATTTCTGATGACAACTCCCACAGTGATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAGTTTTGAAGGAGGTTaGAATGCAAGAGGGACTACT +
Preference number: 5 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHSFEGG*NARGTT
Trigger: AGTAGTCCCTCTTGCATTCAAACCTCCTTCAAAACT...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp CCAATCACTGTGGGAGTTGTCATCAGAAATGCTATCTTTGGTTCCCAACAAATTTACATTTATCTGGTTTaGGCTCTCAGAGAAAGTCCC +
Preference number: 5 (lower is better)
Translates to: PITVGVVIRNAIFGSQQIYIYLV*ALRESP
Trigger: GGGACTTTCTCTGAGAGCCAAAACCAGATAAATGTA...AATTTGTTGGGAACCAAAGATAGCATTTCTGATGACAACTCCCACAGTGATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTCTGTGTTCCCAGTCTTaGTCCATATGCATTTCTTTT +
Preference number: 5 (lower is better)
Translates to: SFISVLLMREMVRCKACSLCSQS*SICISF
Trigger: AAAAGAAATGCATATGGACAAAGACTGGGAACACAG...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp GCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATCTGAGGGAGTGGATCCTTCTCAACTaGTTTTGTGTAGATGTTATG +
Preference number: 5 (lower is better)
Translates to: ALFGLRFRLTNKLHNLREWILLN*FCVDVM
Trigger: CATAACATCTACACAAAACAAGTTGAGAAGGATCCA...CTCCCTCAGATTATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp AGTTTTATTTCAGTCTTACTCATGAGGGAGATGGTGAGGTGTAAGGCTTGCAGTAAATCCTTAAAAAGATaGGATGCTGAGGTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: SFISVLLMREMVRCKACSKSLKR*DAEVRR
Trigger: CCTTCTGACCTCAGCATCCAATCTTTTTAAGGATTT...ACTGCAAGCCTTACACCTCACCATCTCCCTCATGAGTAAGACTGAAATAAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp TCTGGACATCTAATGACAATGCAAGTGAAAAACATCACATTGGGTAAGGAGTTTGCTGAAGAATCCCGGTaGTTACTATTCATCCTCAGT +
Preference number: 5 (lower is better)
Translates to: SGHLMTMQVKNITLGKEFAEESR*LLFILS
Trigger: ACTGAGGATGAATAGTAACAACCGGGATTCTTCAGC...AAACTCCTTACCCAATGTGATGTTTTTCACTTGCATTGTCATTAGATGTCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATGAGTATAGATTGATTTaGTATGCTCTGGTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHEYRLI*YALVLV
Trigger: CACCAAGACCAGAGCATACAAAATCAATCTATACTC...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp CCAATCACTGTGGGAGTTGTCATCAGAAATGCTATCTTTGGTTCCCAACAAATTGAGTATAGATTGATTTaGTATGCTCTGGTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: PITVGVVIRNAIFGSQQIEYRLI*YALVLV
Trigger: CACCAAGACCAGAGCATACAAAATCAATCTATACTC...AATTTGTTGGGAACCAAAGATAGCATTTCTGATGACAACTCCCACAGTGATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp TTCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATCAGAACGAGTATAGATaGATTTTGTATGCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: FNIAALFGLRFRLTNKLHQNEYR*ILYALV
Trigger: GACCAGAGCATACAAAATCAATCTATACTCGTTCTG...ATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp AACAGAACTATAACTGAATGCCAACAGGCAGAGACAGTCCTACATATTTGTTTATATGGATCACCTGGTTaGAGTGCAGGAAATCCAAAG +
Preference number: 5 (lower is better)
Translates to: NRTITECQQAETVLHICLYGSPG*SAGNPK
Trigger: CTTTGGATTTCCTGCACTCAAACCAGGTGATCCATA...TAAACAAATATGTAGGACTGTCTCTGCCTGTTGGCATTCAGTTATAGTTCTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp TTCTTCAAAGTGAATGCACAAAATGAGGGGATTCACTACTGGCTCTTTCGCTTCGAAGTTTCTATTCATTaGAAAGGTAAAGAACCCCCA +
Preference number: 5 (lower is better)
Translates to: FFKVNAQNEGIHYWLFRFEVSIH*KGKEPP
Trigger: TGGGGGTTCTTTACCTTTCAAATGAATAGAAACTTC...GAAGCGAAAGAGCCAGTAGTGAATCCCCTCATTTTGTGCATTCACTTTGAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000519681.5
CDS-3UTR CAA 90 bp AACAATCTGGCGTTCAAGTTACTCGATTGTACCAAATGTGAATCCTTCAGCATCGTTAGATGGTCTCCCTaGCTCTTTAAAAATCACAAC +
Preference number: 5 (lower is better)
Translates to: NNLAFKLLDCTKCESFSIVRWSP*LFKNHN
Trigger: GTTGTGATTTTTAAAGAGCAAGGGAGACCATCTAAC...GATGCTGAAGGATTCACATTTGGTACAATCGAGTAACTTGAACGCCAGATTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp AACAATCTGGCGTTCAAGTTACTCGATTGTACCAAATGTGAATCCTTCAGCATCGAAGTTTCTATTCATTaGAAAGGTAAAGAACCCCCA +
Preference number: 5 (lower is better)
Translates to: NNLAFKLLDCTKCESFSIEVSIH*KGKEPP
Trigger: TGGGGGTTCTTTACCTTTCAAATGAATAGAAACTTC...GATGCTGAAGGATTCACATTTGGTACAATCGAGTAACTTGAACGCCAGATTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS-3UTR CAA 90 bp TCAACATTGCTGCCCTGTTTGGGCTGCGATTCAGGCTTACAAATAAATTACATAATTTTGGAATCAACATaGAAAGATGTGCCCTCGTTA +
Preference number: 5 (lower is better)
Translates to: STLLPCLGCDSGLQINYIILEST*KDVPSL
Trigger: TAACGAGGGCACATCTTTCAATGTTGATTCCAAAAT...TATGTAATTTATTTGTAAGCCTGAATCGCAGCCCAAACAGGGCAGCAATGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372007.10
CDS TCA 72 bp CCAAGCGAAGGAGCCCCGGCCCTCTGGGAACGGCCCTaGCACACCCACTTGTCCGCGAACTGGGATCATGCA +
Preference number: 6 (lower is better)
Translates to: PSEGAPALWERP*HTHLSANWDHA
Trigger: TGCATGATCCCAGTTCGCGGACAAGTGGGTGTGTCAGGGCCGTTCCCAGAGGGCCGGGGCTCCTTCGCTTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484442.5
CDS TCA 72 bp CAAGCGGCCCAGGCCCCAGTAAACGAGTCTAGGGTTTaGCCAAGCGAAGGAGCCCCGGCCCTCTGGGAACGG +
Preference number: 6 (lower is better)
Translates to: QAAQAPVNESRV*PSEGAPALWER
Trigger: CCGTTCCCAGAGGGCCGGGGCTCCTTCGCTTGGTCAAACCCTAGACTCGTTTACTGGGGCCTGGGCCGCTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484442.5
CDS CCA 72 bp TTCTGCCCTTCGCTGCTGGGCAGGAGGAGCAGGGGATaGGAGGAGGAGCAGGAACTGGGGGAGGAAGGAGGA +
Preference number: 6 (lower is better)
Translates to: FCPSLLGRRSRG*EEEQELGEEGG
Trigger: TCCTCCTTCCTCCCCCAGTTCCTGCTCCTCCTCCCATCCCCTGCTCCTCCTGCCCAGCAGCGAAGGGCAGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425146.5
ENST00000446737.5
CDS CCA 72 bp GCACAGGTGGGCACTGCCCATGAGAAGGGTCCGGGCTaGCTTCAGCTCCTACAGACTCAGTGCTGGGCACAC +
Preference number: 6 (lower is better)
Translates to: AQVGTAHEKGPG*LQLLQTQCWAH
Trigger: GTGTGCCCAGCACTGAGTCTGTAGGAGCTGAAGCCAGCCCGGACCCTTCTCATGGGCAGTGCCCACCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000518291.5
ENST00000519681.5
CDS GCA 72 bp GCCCTGACACACCCACTTGTCCGCGAACTGGGATCATaGAAACTGCTCGCTTGGTCTCAGGGCTCCGGGGAG +
Preference number: 6 (lower is better)
Translates to: ALTHPLVRELGS*KLLAWSQGSGE
Trigger: CTCCCCGGAGCCCTGAGACCAAGCGAGCAGTTTGCATGATCCCAGTTCGCGGACAAGTGGGTGTGTCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484442.5
CDS GCA 72 bp CACACCCACTTGTCCGCGAACTGGGATCATGCAAACTaGTCGCTTGGTCTCAGGGCTCCGGGGAGCCACGTA +
Preference number: 6 (lower is better)
Translates to: HTHLSANWDHAN*SLGLRAPGSHV
Trigger: TACGTGGCTCCCCGGAGCCCTGAGACCAAGCGAGCAGTTTGCATGATCCCAGTTCGCGGACAAGTGGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484442.5
CDS CCA 72 bp CTTGTCCGCGAACTGGGATCATGCAAACTGCTCGCTTaGTCTCAGGGCTCCGGGGAGCCACGTAGGAGACTC +
Preference number: 6 (lower is better)
Translates to: LVRELGSCKLLA*SQGSGEPRRRL
Trigger: GAGTCTCCTACGTGGCTCCCCGGAGCCCTGAGACCAAGCGAGCAGTTTGCATGATCCCAGTTCGCGGACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484442.5
CDS TCA 72 bp TGGAATTCCCTCTGGGAGCTTCCCTGGGCACATCTGTaGGCCATAGAGATCTGGAGTGAATTCCCCGGTGAC +
Preference number: 6 (lower is better)
Translates to: WNSLWELPWAHL*AIEIWSEFPGD
Trigger: GTCACCGGGGAATTCACTCCAGATCTCTATGGCTCACAGATGTGCCCAGGGAAGCTCCCAGAGGGAATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262836.6
ENST00000372010.5
CDS CCA 72 bp ACAGACCAACAGCCCAGAACCCTCAAGTCTAGAATCTaGAACTGGATTCTGCCACGGATCCAGCCACCCCGT +
Preference number: 6 (lower is better)
Translates to: TDQQPRTLKSRI*NWILPRIQPPR
Trigger: ACGGGGTGGCTGGATCCGTGGCAGAATCCAGTTCCAGATTCTAGACTTGAGGGTTCTGGGCTGTTGGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000519681.5
CDS CCA 72 bp ACAACTAATTTCACAGCTCCTGTTCCAGCCTCTTCTTaGTCAGAGCGAAGGAGGGCGGCAGCCGAGGGTTCT +
Preference number: 6 (lower is better)
Translates to: TTNFTAPVPASS*SERRRAAAEGS
Trigger: AGAACCCTCGGCTGCCGCCCTCCTTCGCTCTGACCAAGAAGAGGCTGGAACAGGAGCTGTGAAATTAGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425146.5
CDS GCA 72 bp GGGCACACCAGCTGCCACAAGATGCAAGGACTCAGCTaGTCTTTCTTGGGGGAAACCTTTACACCTTGCTCA +
Preference number: 6 (lower is better)
Translates to: GHTSCHKMQGLS*SFLGETFTPCS
Trigger: TGAGCAAGGTGTAAAGGTTTCCCCCAAGAAAGAGCAGCTGAGTCCTTGCATCTTGTGGCAGCTGGTGTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000518291.5
ENST00000519681.5
CDS GCA 72 bp TTCAGCTCCTACAGACTCAGTGCTGGGCACACCAGCTaGCACAAGATGCAAGGACTCAGCTGCTCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: FSSYRLSAGHTS*HKMQGLSCSFL
Trigger: CAAGAAAGAGCAGCTGAGTCCTTGCATCTTGTGGCAGCTGGTGTGCCCAGCACTGAGTCTGTAGGAGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000518291.5
ENST00000519681.5
CDS CCA 72 bp CCCAGAACAGGGCCACGGTGTTGTCACCAACAGGAATaGACCTCCTTCTGTTCCAATACCTCAGACAGCCAT +
Preference number: 6 (lower is better)
Translates to: PRTGPRCCHQQE*TSFCSNTSDSH
Trigger: ATGGCTGTCTGAGGTATTGGAACAGAAGGAGGTCCATTCCTGTTGGTGACAACACCGTGGCCCTGTTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000484442.5
ENST00000518291.5
ENST00000519681.5
CDS CAA 72 bp GGTTTGGAGCTGTGGTTGAGTGCTGAAGAATCCCGGTaGTTACTATTCATCCTCAGTGGAGGAGCCGGGGGT +
Preference number: 6 (lower is better)
Translates to: GLELWLSAEESR*LLFILSGGAGG
Trigger: ACCCCCGGCTCCTCCACTGAGGATGAATAGTAACAACCGGGATTCTTCAGCACTCAACCACAGCTCCAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000429193.5
ENST00000446737.5
ENST00000518291.5
ENST00000519681.5
CDS CAA 90 bp GGGGAAACCTTTACACCTTGCTCATCCCAGAACAGGGCCACGGTGTaGTCACCAACAGGAATGGACCTCCTTCTGTTCCAATACCTCAGA +
Preference number: 6 (lower is better)
Translates to: GETFTPCSSQNRATV*SPTGMDLLLFQYLR
Trigger: TCTGAGGTATTGGAACAGAAGGAGGTCCATTCCTGTTGGTGACAACACCGTGGCCCTGTTCTGGGATGAGCAAGGTGTAAAGGTTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000518291.5
ENST00000519681.5
CDS CAA 90 bp TGGGGATGCTTTACACCTTGCTCATCCCAGAACAGGGCCACGGTGTaGTCACCAACAGGAATGGACCTCCTTCTGTTCCAATACCTCAGA +
Preference number: 6 (lower is better)
Translates to: WGCFTPCSSQNRATV*SPTGMDLLLFQYLR
Trigger: TCTGAGGTATTGGAACAGAAGGAGGTCCATTCCTGTTGGTGACAACACCGTGGCCCTGTTCTGGGATGAGCAAGGTGTAAAGCATCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484442.5
CDS CAA 90 bp ATGGGAAGTGGTTTGGAGCTGTGGTTGAGTGCTGAAGAATCCCGGTaGTTACTATTCATCCTCAGTGGAGGAGCCGGGGGTTTCTCTTCA +
Preference number: 6 (lower is better)
Translates to: MGSGLELWLSAEESR*LLFILSGGAGGFSS
Trigger: TGAAGAGAAACCCCCGGCTCCTCCACTGAGGATGAATAGTAACAACCGGGATTCTTCAGCACTCAACCACAGCTCCAAACCACTTCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000429193.5
ENST00000446737.5
ENST00000518291.5
ENST00000519681.5
CDS TCA 72 bp CTTCAGGGGCCATGGGAAGTGGTTTGGAGCTGTGGTTaGGTGCTGAAGAATCCCGGTTGTTACTATTCATCC +
Preference number: 6 (lower is better)
Translates to: LQGPWEVVWSCG*VLKNPGCYYSS
Trigger: GGATGAATAGTAACAACCGGGATTCTTCAGCACTCAACCACAGCTCCAAACCACTTCCCATGGCCCCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000429193.5
ENST00000446737.5
ENST00000518291.5
ENST00000519681.5
CDS CAA 72 bp TTTACACCTTGCTCATCCCAGAACAGGGCCACGGTGTaGTCACCAACAGGAATGGACCTCCTTCTGTTCCAA +
Preference number: 6 (lower is better)
Translates to: FTPCSSQNRATV*SPTGMDLLLFQ
Trigger: TTGGAACAGAAGGAGGTCCATTCCTGTTGGTGACAACACCGTGGCCCTGTTCTGGGATGAGCAAGGTGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372007.10
ENST00000372010.5
ENST00000484442.5
ENST00000518291.5
ENST00000519681.5
CDS CCA 72 bp TTCTCTTCAGGGGCCATGGGAAGTGGTTTGGAGCTGTaGTTGAGTGCTGAAGAATCCCGGTTGTTACTATTC +
Preference number: 6 (lower is better)
Translates to: FSSGAMGSGLEL*LSAEESRLLLF
Trigger: GAATAGTAACAACCGGGATTCTTCAGCACTCAACCACAGCTCCAAACCACTTCCCATGGCCCCTGAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000429193.5
ENST00000446737.5
ENST00000518291.5
ENST00000519681.5
CDS CAA 90 bp TCCTTCTGTTCCAATACCTCAGACAGCCATACACTTGGCCTGGATTaGAGTCTGCAAAACCATGAGGGGAGCAAGACTAACATGGCCTTC +
Preference number: 6 (lower is better)
Translates to: SFCSNTSDSHTLGLD*SLQNHEGSKTNMAF
Trigger: GAAGGCCATGTTAGTCTTGCTCCCCTCATGGTTTTGCAGACTCAAATCCAGGCCAAGTGTATGGCTGTCTGAGGTATTGGAACAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372010.5
ENST00000519681.5
CDS TCA 72 bp GGAGTGAATTCCCCGGTGACTGCATCAAACCCCACATaGATCGTATGCTCAAAGTCTGAAGGAAGAGAGATC +
Preference number: 6 (lower is better)
Translates to: GVNSPVTASNPT*IVCSKSEGREI
Trigger: GATCTCTCTTCCTTCAGACTTTGAGCATACGATTCATGTGGGGTTTGATGCAGTCACCGGGGAATTCACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262836.6
ENST00000372010.5
CDS TCA 72 bp CCAATACCTCAGACAGCCATACACTTGGCCTGGATTTaGGTCTGCAAAACCATGAGGGGAGCAAGACTAACA +
Preference number: 6 (lower is better)
Translates to: PIPQTAIHLAWI*VCKTMRGARLT
Trigger: TGTTAGTCTTGCTCCCCTCATGGTTTTGCAGACTCAAATCCAGGCCAAGTGTATGGCTGTCTGAGGTATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372010.5
ENST00000519681.5
CDS TCA 72 bp GAGTTTCTTGTTCTCTTGGTTAAAGCTACTGGTTCCTaGAGGTGGGTTACGTGGGTGGGGATGCTTTACACC +
Preference number: 6 (lower is better)
Translates to: EFLVLLVKATGS*RWVTWVGMLYT
Trigger: GGTGTAAAGCATCCCCACCCACGTAACCCACCTTCAGGAACCAGTAGCTTTAACCAAGAGAACAAGAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484442.5
CDS CCA 72 bp CTCCTTCTGTTCCAATACCTCAGACAGCCATACACTTaGCCTGGATTTGAGTCCTTCTCTCCTTCGCTTCTA +
Preference number: 6 (lower is better)
Translates to: LLLFQYLRQPYT*PGFESFSPSLL
Trigger: TAGAAGCGAAGGAGAGAAGGACTCAAATCCAGGCCAAGTGTATGGCTGTCTGAGGTATTGGAACAGAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372007.10
ENST00000484442.5
ENST00000518291.5
CDS CAA 72 bp TCCAATACCTCAGACAGCCATACACTTGGCCTGGATTaGAGTCTGCAAAACCATGAGGGGAGCAAGACTAAC +
Preference number: 6 (lower is better)
Translates to: SNTSDSHTLGLD*SLQNHEGSKTN
Trigger: GTTAGTCTTGCTCCCCTCATGGTTTTGCAGACTCAAATCCAGGCCAAGTGTATGGCTGTCTGAGGTATTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372010.5
ENST00000519681.5
CDS CAA 90 bp TTATTCTTCTCTTCAGGGGCCATGGGAAGTGGTTTGGAGCTGTGGTaGAGTGCTGAAGAATCCCGGTTGTTACTATTCATCCTCAGTGGA +
Preference number: 6 (lower is better)
Translates to: LFFSSGAMGSGLELW*SAEESRLLLFILSG
Trigger: TCCACTGAGGATGAATAGTAACAACCGGGATTCTTCAGCACTCAACCACAGCTCCAAACCACTTCCCATGGCCCCTGAAGAGAAGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000429193.5
ENST00000446737.5
ENST00000518291.5
ENST00000519681.5
CDS TCA 72 bp TTAGTGAATTCCCCGGTGACTGCATCAAACCCCACATaGATCGTATGCTCAAAGTCTGAAGGAAGAGAGATC +
Preference number: 6 (lower is better)
Translates to: LVNSPVTASNPT*IVCSKSEGREI
Trigger: GATCTCTCTTCCTTCAGACTTTGAGCATACGATTCATGTGGGGTTTGATGCAGTCACCGGGGAATTCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360648.8
ENST00000417227.5
ENST00000429193.5
ENST00000518291.5
ENST00000519681.5
CDS TCA 72 bp TCCTCAAGTCATTCCATGTTGGGCGAACTGAACTTCTaGCTCCTCAGAAGAGAAAGCTGTCCTCTGTATGTT +
Preference number: 6 (lower is better)
Translates to: SSSHSMLGELNF*LLRRESCPLYV
Trigger: AACATACAGAGGACAGCTTTCTCTTCTGAGGAGTCAGAAGTTCAGTTCGCCCAACATGGAATGACTTGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446737.5
CDS GCA 72 bp TCACTCTTTATATCTCTATGGATCACCTGGTTTGAGTaGAGGAAATCCAAAGCTTGCAGGCACTCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: SLFISLWITWFE*RKSKACRHSLQ
Trigger: CTGCAGAGAGTGCCTGCAAGCTTTGGATTTCCTGCACTCAAACCAGGTGATCCATAGAGATATAAAGAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000518291.5
ENST00000519681.5
CDS CAA 72 bp CTTTGCCGATCTGTGTTCCTGTACAAAGTACTGGAATaGGCATTTTCAGCAGAGGGTGGTGTGACCTCTTTA +
Preference number: 6 (lower is better)
Translates to: LCRSVFLYKVLE*AFSAEGGVTSL
Trigger: TAAAGAGGTCACACCACCCTCTGCTGAAAATGCCAATTCCAGTACTTTGTACAGGAACACAGATCGGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000446737.5
ENST00000518291.5
ENST00000519681.5
CDS CAA 90 bp TCTAGAACAGCTTGTGGGTTCTTCTTCTGTTCCAATTTTGTTATGTaGGAAGTTTGGAGTAATCGTGCCCATTGCTCTGGAATTCCCTCT +
Preference number: 6 (lower is better)
Translates to: SRTACGFFFCSNFVM*EVWSNRAHCSGIPS
Trigger: AGAGGGAATTCCAGAGCAATGGGCACGATTACTCCAAACTTCCAACATAACAAAATTGGAACAGAAGAAGAACCCACAAGCTGTTCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372010.5
ENST00000429193.5
ENST00000518291.5
CDS CAA 90 bp TCTAGAACAGCTTGTGGGTTCTTCTTCTGTTCCAATTTTGTTATGTaGGAAGTTTGGAGTAATCGTGCCCATTGCTCTGGAATTCCAGTG +
Preference number: 6 (lower is better)
Translates to: SRTACGFFFCSNFVM*EVWSNRAHCSGIPV
Trigger: CACTGGAATTCCAGAGCAATGGGCACGATTACTCCAAACTTCCAACATAACAAAATTGGAACAGAAGAAGAACCCACAAGCTGTTCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372007.10
ENST00000425146.5
ENST00000446737.5
ENST00000487802.1
CDS CAA 90 bp TCTAGAACAGCTTGTGGGTTCTTCTTCTGTTCCAATTTTGTTATGTaGGAAGTTTGGAGTAATCGTGCCCATTGCTCTGGAATTCCCATT +
Preference number: 6 (lower is better)
Translates to: SRTACGFFFCSNFVM*EVWSNRAHCSGIPI
Trigger: AATGGGAATTCCAGAGCAATGGGCACGATTACTCCAAACTTCCAACATAACAAAATTGGAACAGAAGAAGAACCCACAAGCTGTTCTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417227.5
ENST00000519681.5
CDS CAA 72 bp CTAGAACAGCTTGTGGGTTCTTCTTCTGTTCCAATTTaGTTATGTTGGAAGTTTGGAGTAATCGTGCCCATT +
Preference number: 6 (lower is better)
Translates to: LEQLVGSSSVPI*LCWKFGVIVPI
Trigger: AATGGGCACGATTACTCCAAACTTCCAACATAACAAAATTGGAACAGAAGAAGAACCCACAAGCTGTTCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000262836.6
ENST00000360648.8
ENST00000372007.10
ENST00000372010.5
ENST00000417227.5
ENST00000425146.5
ENST00000429193.5
ENST00000446737.5
ENST00000487802.1
ENST00000518291.5
ENST00000519681.5