Pregenerated sensors for PAIP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000172239Ensembl transcript IDs: ENST00000306846.8, ENST00000338972.8, ENST00000436644.6, ENST00000504075.1, ENST00000504639.5, ENST00000514514.5, ENST00000515338.1
Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCGTGGACCCTGCGCCAGGGTTCGCTGGCGCACAGGTGTGTTCAATaGCTCGGCTCCGGCCGAGACCCGCGGACTGCTGAGGAGTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: AWTLRQGSLAHRCVQ*LGSGRDPRTAEEWS Trigger: GGACCACTCCTCAGCAGTCCGCGGGTCTCGGCCGGAGCCGAGTCATTGAACACACCTGTGCGCCAGCGAACCCTGGCGCAGGGTCCACGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000338972.8 ENST00000515338.1 |
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| CDS TCA 90 bp | CAGGTGTGTTCAATGACTCGGCTCCGGCCGAGACCCGCGGACTGCTaGGGAGTGGTCCCTGGGAGACTGTCACCTGCTCCGTTAGCATCG | + |
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Preference number: 5 (lower is better) Translates to: QVCSMTRLRPRPADC*GVVPGRLSPAPLAS Trigger: CGATGCTAACGGAGCAGGTGACAGTCTCCCAGGGACCACTCCTCAGCAGTCCGCGGGTCTCGGCCGGAGCCGAGTCATTGAACACACCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000338972.8 ENST00000515338.1 |
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| CDS GCA 72 bp | GACCAGCACCTGGGGCCCGATCGAAACCGTCCGACATaGTCCTCCTCCTCCGCCTCCTCCTCCAGGGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: DQHLGPDRNRPT*SSSSASSSRGR Trigger: GCGGCCCCTGGAGGAGGAGGCGGAGGAGGAGGAGCATGTCGGACGGTTTCGATCGGGCCCCAGGTGCTGGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000306846.8 ENST00000504639.5 |
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| CDS TCA 72 bp | CTGCGCCAGGGTTCGCTGGCGCACAGGTGTGTTCAATaGCTCGGCTCCGGCCGAGACCCGCGGACTGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: LRQGSLAHRCVQ*LGSGRDPRTAE Trigger: CTCAGCAGTCCGCGGGTCTCGGCCGGAGCCGAGTCATTGAACACACCTGTGCGCCAGCGAACCCTGGCGCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000338972.8 ENST00000515338.1 |
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| CDS GCA 72 bp | TCGTTTGCTCTGGGGCCCGATCGAAACCGTCCGACATaGTCCTCCTCCTCCGCCTCCTCCTCCAGGGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: SFALGPDRNRPT*SSSSASSSRGR Trigger: GCGGCCCCTGGAGGAGGAGGCGGAGGAGGAGGAGCATGTCGGACGGTTTCGATCGGGCCCCAGAGCAAACGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000436644.6 ENST00000514514.5 |
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| CDS CCA 72 bp | CCGGCCGAGACCCGCGGACTGCTGAGGAGTGGTCCCTaGGAGACTGTCACCTGCTCCGTTAGCATCGGGGGA | + |
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Preference number: 6 (lower is better) Translates to: PAETRGLLRSGP*ETVTCSVSIGG Trigger: TCCCCCGATGCTAACGGAGCAGGTGACAGTCTCCCAGGGACCACTCCTCAGCAGTCCGCGGGTCTCGGCCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000338972.8 ENST00000515338.1 |
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| CDS TCA 72 bp | TCAATGACTCGGCTCCGGCCGAGACCCGCGGACTGCTaGGGAGTGGTCCCTGGGAGACTGTCACCTGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: SMTRLRPRPADC*GVVPGRLSPAP Trigger: CGGAGCAGGTGACAGTCTCCCAGGGACCACTCCTCAGCAGTCCGCGGGTCTCGGCCGGAGCCGAGTCATTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000338972.8 ENST00000515338.1 |
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| CDS GCA 72 bp | ATAGGATTCCTGGGGCCCGATCGAAACCGTCCGACATaGTCCTCCTCCTCCGCCTCCTCCTCCAGGGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: IGFLGPDRNRPT*SSSSASSSRGR Trigger: GCGGCCCCTGGAGGAGGAGGCGGAGGAGGAGGAGCATGTCGGACGGTTTCGATCGGGCCCCAGGAATCCTAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504075.1 |
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