RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PAICS (Homo sapiens)

Ensembl gene IDs: ENSG00000128050

Ensembl transcript IDs: ENST00000264221.6, ENST00000399688.7, ENST00000505164.5, ENST00000510584.1, ENST00000512576.3, ENST00000514888.5

Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAATTGGCTCTGCAAAATGGAGGTGAAGTCCCACAGTCTGCCTTCTaGAGGCTGAAGGCCCAGGAAAGCCAGTGTAGTTCCAAACCCGAG +
Preference number: 1 (lower is better)
Translates to: KLALQNGGEVPQSAF*RLKAQESQCSSKPE
Trigger: CTCGGGTTTGGAACTACACTGGCTTTCCTGGGCCTTCAGCCTGCAGAAGGCAGACTGTGGGACTTCACCTCCATTTTGCAGAGCCAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR TCA 90 bp TCTATTCAGGCCCTCAATGGATTAGATGACGCTCACCCACATGGGTaGAGGCAGTCTTCTTTACTCAAGTCTACTGATTCAAGTGCTAGT +
Preference number: 1 (lower is better)
Translates to: SIQALNGLDDAHPHG*RQSSLLKSTDSSAS
Trigger: ACTAGCACTTGAATCAGTAGACTTGAGTAAAGAAGACTGCCTTCACCCATGTGGGTGAGCGTCATCTAATCCATTGAGGGCCTGAATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR CCA 90 bp AACACCATTAAAAACAACTCTTTTCAATGGCTTTCTAAGGTTGGCTaGGCTGAAATGGCAGGTTGTGGATGCTCCGTGGCACATCACACT +
Preference number: 1 (lower is better)
Translates to: NTIKNNSFQWLSKVG*AEMAGCGCSVAHHT
Trigger: AGTGTGATGTGCCACGGAGCATCCACAACCTGCCATTTCAGCCCAGCCAACCTTAGAAAGCCATTGAAAAGAGTTGTTTTTAATGGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR CCA 90 bp AGCCACTGTGCCCAGCTACCTCATCAATTCTTAATCTATAAACCATaGATAGGCTTCGGGAGAACCCAAGAACCAATGAAATCTGTTGGT +
Preference number: 1 (lower is better)
Translates to: SHCAQLPHQFLIYKP*IGFGRTQEPMKSVG
Trigger: ACCAACAGATTTCATTGGTTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGCACAGTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR CCA 90 bp TTCCACTCTCATCCTTGTTCACAGAGCTCTAGCAATTCTCATGTTTaGAGGTCCTCAAGGCAAAACTCAGCTTTATTTCCCATTCCCTTA +
Preference number: 1 (lower is better)
Translates to: FHSHPCSQSSSNSHV*RSSRQNSALFPIPL
Trigger: TAAGGGAATGGGAAATAAAGCTGAGTTTTGCCTTGAGGACCTCCAAACATGAGAATTGCTAGAGCTCTGTGAACAAGGATGAGAGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR TCA 90 bp ATGAGCTACCATGCCCAGAGAATTCCAGGTAATTCTCATGGTGAATaGATTCCATTCATACTGTTGTTCTTCAGTCTGCCAAATGGATAT +
Preference number: 1 (lower is better)
Translates to: MSYHAQRIPGNSHGE*IPFILLFFSLPNGY
Trigger: ATATCCATTTGGCAGACTGAAGAACAACAGTATGAATGGAATTCATTCACCATGAGAATTACCTGGAATTCTCTGGGCATGGTAGCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR GCA 90 bp TCTGCCTTCTGCAGGCTGAAGGCCCAGGAAAGCCAGTGTAGTTCCAAACCCGAGTTCAAGCGATTCTCCTaGCTCAGCCTCCTGAGTCGC +
Preference number: 2 (lower is better)
Translates to: SAFCRLKAQESQCSSKPEFKRFS*LSLLSR
Trigger: GCGACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAA...CTCGGGTTTGGAACTACACTGGCTTTCCTGGGCCTTCAGCCTGCAGAAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR TCA 90 bp TCTGCCTTCTGCAGGCTGAAGGCCCAGGAAAGCCAGTGTAGTTCCAAACCCGAGCCTCAATGGATTAGATaGCGCTCACCCACATGGGTG +
Preference number: 2 (lower is better)
Translates to: SAFCRLKAQESQCSSKPEPQWIR*RSPTWV
Trigger: CACCCATGTGGGTGAGCGTCATCTAATCCATTGAGG...CTCGGGTTTGGAACTACACTGGCTTTCCTGGGCCTTCAGCCTGCAGAAGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR GCA 90 bp TCTGCCTTCTGCAGGCTGAAGGCCCAGGAAAGCCAGTGTAGTTCCAAACCCGAGATGGCAGGTTGTGGATaGTCCGTGGCACATCACACT +
Preference number: 2 (lower is better)
Translates to: SAFCRLKAQESQCSSKPEMAGCG*SVAHHT
Trigger: AGTGTGATGTGCCACGGAGCATCCACAACCTGCCAT...CTCGGGTTTGGAACTACACTGGCTTTCCTGGGCCTTCAGCCTGCAGAAGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR TCA 90 bp TGGACAAGGGCTTTGCTCAGTCCTATTTTCCTAGGCCCTAGAATCAAACCAGTAGGTGGGAGAACTGCTTaGGCCCAGGAGGGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: WTRALLSPIFLGPRIKPVGGRTA*AQEGKQ
Trigger: CTGCTTTCCCTCCTGGGCTCAAGCAGTTCTCCCACC...TACTGGTTTGATTCTAGGGCCTAGGAAAATAGGACTGAGCAAAGCCCTTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR TCA 90 bp CATGCACCCAGCTACTCGAGAGGCTGCAGCTTGAGTCCAGGAGTTCAAGGCTGCTACAGGCTTGGAAGATaGATAAAGTTGGGAGCATTC +
Preference number: 2 (lower is better)
Translates to: HAPSYSRGCSLSPGVQGCYRLGR*IKLGAF
Trigger: GAATGCTCCCAACTTTATTCATCTTCCAAGCCTGTA...GCAGCCTTGAACTCCTGGACTCAAGCTGCAGCCTCTCGAGTAGCTGGGTGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR GCA 90 bp GTATGTCAAGCCTCTGCTCAAACTGAGTTTTTCCTGTCACACTTCAGTGTGGCCGGGTGTGGTAGCACATaGACCCAGCTACTCGAGAGG +
Preference number: 2 (lower is better)
Translates to: VCQASAQTEFFLSHFSVAGCGST*TQLLER
Trigger: CCTCTCGAGTAGCTGGGTGCATGTGCTACCACACCC...GGCCACACTGAAGTGTGACAGGAAAAACTCAGTTTGAGCAGAGGCTTGACATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR TCA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTGGTGGGAGAACTGCTTaGGCCCAGGAGGGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSGGRTA*AQEGKQ
Trigger: CTGCTTTCCCTCCTGGGCTCAAGCAGTTCTCCCACC...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR GCA 90 bp TCTGCCTTCTGCAGGCTGAAGGCCCAGGAAAGCCAGTGTAGTTCCAAACCCGAGCCTATCTGTGTGTCTTaGTTTTACATCATTGCTCTG +
Preference number: 2 (lower is better)
Translates to: SAFCRLKAQESQCSSKPEPICVS*FYIIAL
Trigger: CAGAGCAATGATGTAAAAGCAAGACACACAGATAGG...CTCGGGTTTGGAACTACACTGGCTTTCCTGGGCCTTCAGCCTGCAGAAGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR CCA 90 bp TCTGCCTTCTGCAGGCTGAAGGCCCAGGAAAGCCAGTGTAGTTCCAAACCCGAGAAAATTAGCTCGGCATaGTGCTGCAAGATTATAGTC +
Preference number: 2 (lower is better)
Translates to: SAFCRLKAQESQCSSKPEKISSA*CCKIIV
Trigger: GACTATAATCTTGCAGCACCATGCCGAGCTAATTTT...CTCGGGTTTGGAACTACACTGGCTTTCCTGGGCCTTCAGCCTGCAGAAGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR TCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGGGTGGGAGAACTGCTTaGGCCCAGGAGGGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGGGRTA*AQEGKQ
Trigger: CTGCTTTCCCTCCTGGGCTCAAGCAGTTCTCCCACC...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR GCA 90 bp TCTGCCTTCTGCAGGCTGAAGGCCCAGGAAAGCCAGTGTAGTTCCAAACCCGAGCAAAGAAGTCTGTGGTaGAAAAGAGAGTTTATTGTT +
Preference number: 2 (lower is better)
Translates to: SAFCRLKAQESQCSSKPEQRSLW*KREFIV
Trigger: AACAATAAACTCTCTTTTGCACCACAGACTTCTTTG...CTCGGGTTTGGAACTACACTGGCTTTCCTGGGCCTTCAGCCTGCAGAAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR CCA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAAGTCGAGAGGCTGAGGTaGGAGAACTGCTTGAGCCCA +
Preference number: 2 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQEVERLR*ENCLSP
Trigger: TGGGCTCAAGCAGTTCTCCCACCTCAGCCTCTCGAC...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR CCA 90 bp GTATGTCAAGCCTCTGCTCAAACTGAGTTTTTCCTGTCACACTTCAGTGTGGCCGTAACCCTAGCACTTTaGGAGGCTGAGATAGGAGAA +
Preference number: 2 (lower is better)
Translates to: VCQASAQTEFFLSHFSVAVTLAL*EAEIGE
Trigger: TTCTCCTATCTCAGCCTCCCAAAGTGCTAGGGTTAC...GGCCACACTGAAGTGTGACAGGAAAAACTCAGTTTGAGCAGAGGCTTGACATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR CCA 90 bp ATTCAAGTGCTAGTCTCTTCCAGAAACACCATCACAGATGTACCTAGAAATGTTCAGGCTGGAGTACAATaGCGCAACCTCGGCTCACCA +
Preference number: 2 (lower is better)
Translates to: IQVLVSSRNTITDVPRNVQAGVQ*RNLGSP
Trigger: TGGTGAGCCGAGGTTGCGCCATTGTACTCCAGCCTG...AACATTTCTAGGTACATCTGTGATGGTGTTTCTGGAAGAGACTAGCACTTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR TCA 90 bp CAGATTATGAGAAATTGGCTCTGCAAAATGGAGGTGAAGTCCCACAGTCTGCCTAGCCTCTGCTCAAACTaGGTTTTTCCTGTCACACTT +
Preference number: 2 (lower is better)
Translates to: QIMRNWLCKMEVKSHSLPSLCSN*VFPVTL
Trigger: AAGTGTGACAGGAAAAACTCAGTTTGAGCAGAGGCT...AGGCAGACTGTGGGACTTCACCTCCATTTTGCAGAGCCAATTTCTCATAATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR GCA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTAGCTCGGCATGGTGCTaGAAGATTATAGTCCCTGTT +
Preference number: 2 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSSSAWC*KIIVPV
Trigger: AACAGGGACTATAATCTTGCAGCACCATGCCGAGCT...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR CCA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAGTAACCCTAGCACTTTaGGAGGCTGAGATAGGAGAA +
Preference number: 2 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRVTLAL*EAEIGE
Trigger: TTCTCCTATCTCAGCCTCCCAAAGTGCTAGGGTTAC...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR CCA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGATTTCATGAGTGCCCATaGGACAGACAGGGAGAAATG +
Preference number: 2 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRFHECP*DRQGEM
Trigger: CATTTCTCCCTGTCTGTCCCATGGGCACTCATGAAA...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR CCA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTTTTCATGAGTGCCCATaGGACAGACAGGGAGAAATG +
Preference number: 2 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSFHECP*DRQGEM
Trigger: CATTTCTCCCTGTCTGTCCCATGGGCACTCATGAAA...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR TCA 90 bp CAGATTATGAGAAATTGGCTCTGCAAAATGGAGGTGAAGTCCCACAGTCTGCCTGGAGAAATGGACAGTTaGAAGTACAAGTCTAGACAG +
Preference number: 2 (lower is better)
Translates to: QIMRNWLCKMEVKSHSLPGEMDS*KYKSRQ
Trigger: CTGTCTAGACTTGTACTTTCAACTGTCCATTTCTCC...AGGCAGACTGTGGGACTTCACCTCCATTTTGCAGAGCCAATTTCTCATAATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR TCA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGATCTGACTTGCAACAGTaGGTATACCAAGAGCTACAG +
Preference number: 2 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRSDLQQ*VYQELQ
Trigger: CTGTAGCTCTTGGTATACTCACTGTTGCAAGTCAGA...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR TCA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTTCTGACTTGCAACAGTaGGTATACCAAGAGCTACAG +
Preference number: 2 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSSDLQQ*VYQELQ
Trigger: CTGTAGCTCTTGGTATACTCACTGTTGCAAGTCAGA...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR GCA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAATTAGCTCGGCATGGTaGTGCAAGATTATAGTCCCT +
Preference number: 2 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRISSAW*CKIIVP
Trigger: AGGGACTATAATCTTGCAGCACCATGCCGAGCTAAT...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR GCA 90 bp TGGACAAGGGCTTTGCTCAGTCCTATTTTCCTAGGCCCTAGAATCAAACCAGTAGGTAAGTTTTATGTGTaGGGTTTTCTACAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: WTRALLSPIFLGPRIKPVGKFYV*GFLQRG
Trigger: CCCTCTCTGTAGAAAACCGCACACATAAAACTTACC...TACTGGTTTGATTCTAGGGCCTAGGAAAATAGGACTGAGCAAAGCCCTTGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR CCA 90 bp GTATGTCAAGCCTCTGCTCAAACTGAGTTTTTCCTGTCACACTTCAGTGTGGCCTTAATCTATAAACCATaGATAGGCTTCGGGAGAACC +
Preference number: 2 (lower is better)
Translates to: VCQASAQTEFFLSHFSVALIYKP*IGFGRT
Trigger: GGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAA...GGCCACACTGAAGTGTGACAGGAAAAACTCAGTTTGAGCAGAGGCTTGACATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR CCA 90 bp CAGATTATGAGAAATTGGCTCTGCAAAATGGAGGTGAAGTCCCACAGTCTGCCTAACATAAGTTCCATCTaGACAAGGGCTTTGCTCAGT +
Preference number: 2 (lower is better)
Translates to: QIMRNWLCKMEVKSHSLPNISSI*TRALLS
Trigger: ACTGAGCAAAGCCCTTGTCCAGATGGAACTTATGTT...AGGCAGACTGTGGGACTTCACCTCCATTTTGCAGAGCCAATTTCTCATAATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR TCA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTTACAGGCTTGGAAGATaGATAAAGTTGGGAGCATTC +
Preference number: 2 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSYRLGR*IKLGAF
Trigger: GAATGCTCCCAACTTTATTCATCTTCCAAGCCTGTA...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR TCA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAAATTTGACCCTCACTTaGGGCTTTTGTACAGAGGAT +
Preference number: 2 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRNLTLT*GFCTED
Trigger: ATCCTCTGTACAAAAGCCTCAAGTGAGGGTCAAATT...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR GCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGAGCTCGGCATGGTGCTaGAAGATTATAGTCCCTGTT +
Preference number: 2 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGSSAWC*KIIVPV
Trigger: AACAGGGACTATAATCTTGCAGCACCATGCCGAGCT...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR GCA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAGGTAAGTTTTATGTGTaGGGTTTTCTACAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRGKFYV*GFLQRG
Trigger: CCCTCTCTGTAGAAAACCGCACACATAAAACTTACC...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR GCA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTGGTAAGTTTTATGTGTaGGGTTTTCTACAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSGKFYV*GFLQRG
Trigger: CCCTCTCTGTAGAAAACCGCACACATAAAACTTACC...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR GCA 90 bp TTTGCTTATATTGTCTTCCACTCTCATCCTTGTTCACAGAGCTCTAGCAATTCTTTCAAGCAATTCTCATaGCTCAGCCTCCCGAGTAGC +
Preference number: 2 (lower is better)
Translates to: FAYIVFHSHPCSQSSSNSFKQFS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCATGAGAATTGCTTGAA...AGAATTGCTAGAGCTCTGTGAACAAGGATGAGAGTGGAAGACAATATAAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR CCA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTCTGGAGAAATATAGCTaGGAGTCAGTAATGCCAGTT +
Preference number: 2 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSLEKYS*ESVMPV
Trigger: AACTGGCATTACTGACTCCCAGCTATATTTCTCCAG...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR CCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGGTAACCCTAGCACTTTaGGAGGCTGAGATAGGAGAA +
Preference number: 2 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGVTLAL*EAEIGE
Trigger: TTCTCCTATCTCAGCCTCCCAAAGTGCTAGGGTTAC...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR CCA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTCAAGAGCTACAGGCTTaGAAGATGAATAAAGTTGGG +
Preference number: 2 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSQELQA*KMNKVG
Trigger: CCCAACTTTATTCATCTTCCAAGCCTGTAGCTCTTG...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR CAA 90 bp GCTTTGCTCAGTCCTATTTTCCTAGGCCCTAGAATCAAACCAGTATaGGGTGAATGGATACTGAATGAAGCTTTACCTAAGTGCTTTGTC +
Preference number: 2 (lower is better)
Translates to: ALLSPIFLGPRIKPV*GEWILNEALPKCFV
Trigger: GACAAAGCACTTAGGTAAAGCTTCATTCAGTATCCATTCACCCAATACTGGTTTGATTCTAGGGCCTAGGAAAATAGGACTGAGCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR TCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGTCTGACTTGCAACAGTaGGTATACCAAGAGCTACAG +
Preference number: 2 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGSDLQQ*VYQELQ
Trigger: CTGTAGCTCTTGGTATACTCACTGTTGCAAGTCAGA...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR TCA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTCTTTTGTACAGAGGATaGGAAGACGGTAAATTCAAG +
Preference number: 2 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSLLYRG*EDGKFK
Trigger: CTTGAATTTACCGTCTTCTCATCCTCTGTACAAAAG...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR GCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGATTAGCTCGGCATGGTaGTGCAAGATTATAGTCCCT +
Preference number: 2 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGISSAW*CKIIVP
Trigger: AGGGACTATAATCTTGCAGCACCATGCCGAGCTAAT...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR GCA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAAATTAGCTCGGCATGGTaGTGCAAGATTATAGTCCCT +
Preference number: 2 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQEISSAW*CKIIVP
Trigger: AGGGACTATAATCTTGCAGCACCATGCCGAGCTAAT...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR GCA 90 bp TCTTCCACTCTCATCCTTGTTCACAGAGCTCTAGCAATTCTCATGTTTGGAGGTATCAAGCTTCTGACTTaGAACAGTGAGTATACCAAG +
Preference number: 2 (lower is better)
Translates to: SSTLILVHRALAILMFGGIKLLT*NSEYTK
Trigger: CTTGGTATACTCACTGTTGCAAGTCAGAAGCTTGAT...ACCTCCAAACATGAGAATTGCTAGAGCTCTGTGAACAAGGATGAGAGTGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR CCA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAAAAATTAGCTCGGCATaGTGCTGCAAGATTATAGTC +
Preference number: 2 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRKISSA*CCKIIV
Trigger: GACTATAATCTTGCAGCACCATGCCGAGCTAATTTT...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR CCA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTAAAATTAGCTCGGCATaGTGCTGCAAGATTATAGTC +
Preference number: 2 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSKISSA*CCKIIV
Trigger: GACTATAATCTTGCAGCACCATGCCGAGCTAATTTT...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR TCA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTTCTGACTTGCAACAGTaGGTATACCAAGAGCTACAG +
Preference number: 2 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSSDLQQ*VYQELQ
Trigger: CTGTAGCTCTTGGTATACTCACTGTTGCAAGTCAGA...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR TCA 90 bp TCTTCCACTCTCATCCTTGTTCACAGAGCTCTAGCAATTCTCATGTTTGGAGGTATGAAATCAAGCTTCTaGCTTGCAACAGTGAGTATA +
Preference number: 2 (lower is better)
Translates to: SSTLILVHRALAILMFGGMKSSF*LATVSI
Trigger: TATACTCACTGTTGCAAGTCAGAAGCTTGATTTCAT...ACCTCCAAACATGAGAATTGCTAGAGCTCTGTGAACAAGGATGAGAGTGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR TCA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTATGAAATCAAGCTTCTaGCTTGCAACAGTGAGTATA +
Preference number: 2 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSMKSSF*LATVSI
Trigger: TATACTCACTGTTGCAAGTCAGAAGCTTGATTTCAT...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR TCA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAAAATTTGACCCTCACTTaGGGCTTTTGTACAGAGGAT +
Preference number: 2 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQENLTLT*GFCTED
Trigger: ATCCTCTGTACAAAAGCCTCAAGTGAGGGTCAAATT...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR TCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGAATTTGACCCTCACTTaGGGCTTTTGTACAGAGGAT +
Preference number: 2 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGNLTLT*GFCTED
Trigger: ATCCTCTGTACAAAAGCCTCAAGTGAGGGTCAAATT...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR CCA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAACTGGAGAAATATAGCTaGGAGTCAGTAATGCCAGTT +
Preference number: 2 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQELEKYS*ESVMPV
Trigger: AACTGGCATTACTGACTCCCAGCTATATTTCTCCAG...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR TCA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTGGAGAAATGGACAGTTaGAAGTACAAGTCTAGACAG +
Preference number: 2 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSGEMDS*KYKSRQ
Trigger: CTGTCTAGACTTGTACTTTCAACTGTCCATTTCTCC...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR TCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGCTTTTGTACAGAGGATaGGAAGACGGTAAATTCAAG +
Preference number: 2 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGLLYRG*EDGKFK
Trigger: CTTGAATTTACCGTCTTCTCATCCTCTGTACAAAAG...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR GCA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAAATCAAGCTTCTGACTTaGAACAGTGAGTATACCAAG +
Preference number: 2 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQEIKLLT*NSEYTK
Trigger: CTTGGTATACTCACTGTTGCAAGTCAGAAGCTTGAT...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR GCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGATCAAGCTTCTGACTTaGAACAGTGAGTATACCAAG +
Preference number: 2 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGIKLLT*NSEYTK
Trigger: CTTGGTATACTCACTGTTGCAAGTCAGAAGCTTGAT...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR CCA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTCTGGAGAAATATAGCTaGGAGTCAGTAATGCCAGTT +
Preference number: 2 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSLEKYS*ESVMPV
Trigger: AACTGGCATTACTGACTCCCAGCTATATTTCTCCAG...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR CCA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGACTGGAGAAATATAGCTaGGAGTCAGTAATGCCAGTT +
Preference number: 2 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRLEKYS*ESVMPV
Trigger: AACTGGCATTACTGACTCCCAGCTATATTTCTCCAG...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR CCA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAAAAAATTAGCTCGGCATaGTGCTGCAAGATTATAGTC +
Preference number: 2 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQEKISSA*CCKIIV
Trigger: GACTATAATCTTGCAGCACCATGCCGAGCTAATTTT...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR CCA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTCAAGAGCTACAGGCTTaGAAGATGAATAAAGTTGGG +
Preference number: 2 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSQELQA*KMNKVG
Trigger: CCCAACTTTATTCATCTTCCAAGCCTGTAGCTCTTG...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR CAA 90 bp TGCCTCTGGAGACTTCCAAGATTCATTGAGAGCAGAAGGTTAATTTaGTTCATCTTTGCATTCCCAGGGTCTTATATATACATAATAGGC +
Preference number: 2 (lower is better)
Translates to: CLWRLPRFIESRRLI*FIFAFPGSYIYIIG
Trigger: GCCTATTATGTATATATAAGACCCTGGGAATGCAAAGATGAACAAAATTAACCTTCTGCTCTCAATGAATCTTGGAAGTCTCCAGAGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR TCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGATGAAATCAAGCTTCTaGCTTGCAACAGTGAGTATA +
Preference number: 2 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGMKSSF*LATVSI
Trigger: TATACTCACTGTTGCAAGTCAGAAGCTTGATTTCAT...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR TCA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTCTTTTGTACAGAGGATaGGAAGACGGTAAATTCAAG +
Preference number: 2 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSLLYRG*EDGKFK
Trigger: CTTGAATTTACCGTCTTCTCATCCTCTGTACAAAAG...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR GCA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTATCAAGCTTCTGACTTaGAACAGTGAGTATACCAAG +
Preference number: 2 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSIKLLT*NSEYTK
Trigger: CTTGGTATACTCACTGTTGCAAGTCAGAAGCTTGAT...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR CCA 90 bp TTTGCTTATATTGTCTTCCACTCTCATCCTTGTTCACAGAGCTCTAGCAATTCTCCCATTCCCTTAGTATaGAAAGCTATTTCCCTATCT +
Preference number: 2 (lower is better)
Translates to: FAYIVFHSHPCSQSSSNSPIPLV*KAISLS
Trigger: AGATAGGGAAATAGCTTTCCATACTAAGGGAATGGG...AGAATTGCTAGAGCTCTGTGAACAAGGATGAGAGTGGAAGACAATATAAGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR TCA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTATGAAATCAAGCTTCTaGCTTGCAACAGTGAGTATA +
Preference number: 2 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSMKSSF*LATVSI
Trigger: TATACTCACTGTTGCAAGTCAGAAGCTTGATTTCAT...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR CAA 90 bp ATACTGTTGTTCTTCAGTCTGCCAAATGGATATTACATAACACATTaGTGTGCCATGATGGGCCTTACATATATTGACTCATGTAATTCT +
Preference number: 2 (lower is better)
Translates to: ILLFFSLPNGYYITH*CAMMGLTYIDSCNS
Trigger: AGAATTACATGAGTCAATATATGTAAGGCCCATCATGGCACACAAATGTGTTATGTAATATCCATTTGGCAGACTGAAGAACAACAGTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR GCA 72 bp CTGCAAAATGGAGGTGAAGTCCCACAGTCTGCCTTCTaGAGGCTGAAGGCCCAGGAAAGCCAGTGTAGTTCC +
Preference number: 3 (lower is better)
Translates to: LQNGGEVPQSAF*RLKAQESQCSS
Trigger: GGAACTACACTGGCTTTCCTGGGCCTTCAGCCTGCAGAAGGCAGACTGTGGGACTTCACCTCCATTTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR CAA 90 bp CATGCACCCAGCTACTCGAGAGGCTGCAGCTTGAGTCCAGGAGTTCAAGGCTGCGCAAAAGAGAGTTTATaGTTAGAAGTCCTTGGGCAA +
Preference number: 3 (lower is better)
Translates to: HAPSYSRGCSLSPGVQGCAKESL*LEVLGQ
Trigger: TTGCCCAAGGACTTCTAACAATAAACTCTCTTTTGC...GCAGCCTTGAACTCCTGGACTCAAGCTGCAGCCTCTCGAGTAGCTGGGTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR TCA 72 bp CCCAGGAAAGCCAGTGTAGTTCCAAACCCGAGGGCTTaGGAATCAGGGGAGGCAATAACGTTAAGTCCTAGT +
Preference number: 3 (lower is better)
Translates to: PRKASVVPNPRA*ESGEAITLSPS
Trigger: ACTAGGACTTAACGTTATTGCCTCCCCTGATTCTCAAGCCCTCGGGTTTGGAACTACACTGGCTTTCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR CCA 72 bp CTTTTCAATGGCTTTCTAAGGTTGGCTGGGCTGAAATaGCAGGTTGTGGATGCTCCGTGGCACATCACACTG +
Preference number: 3 (lower is better)
Translates to: LFNGFLRLAGLK*QVVDAPWHITL
Trigger: CAGTGTGATGTGCCACGGAGCATCCACAACCTGCCATTTCAGCCCAGCCAACCTTAGAAAGCCATTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR GCA 72 bp CCTCACCTGGGCTACAATAGCCTCTTAACTAATCTCTaGTTCTCCTCTTGTCCACACAACAGCCAGAGAACC +
Preference number: 3 (lower is better)
Translates to: PHLGYNSLLTNL*FSSCPHNSQRT
Trigger: GGTTCTCTGGCTGTTGTGTGGACAAGAGGAGAAGCAGAGATTAGTTAAGAGGCTATTGTAGCCCAGGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR GCA 72 bp CTAATGATGAAATTCATAATTGGGTGTGGTAGCACATaGACCCAGCTACTCGAGAGGCTGCAGCTTGAGTCC +
Preference number: 3 (lower is better)
Translates to: LMMKFIIGCGST*TQLLERLQLES
Trigger: GGACTCAAGCTGCAGCCTCTCGAGTAGCTGGGTGCATGTGCTACCACACCCAATTATGAATTTCATCATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR CCA 72 bp AAAAACAACTCTTTTCAATGGCTTTCTAAGGTTGGCTaGGCTGAAATGGCAGGTTGTGGATGCTCCGTGGCA +
Preference number: 3 (lower is better)
Translates to: KNNSFQWLSKVG*AEMAGCGCSVA
Trigger: TGCCACGGAGCATCCACAACCTGCCATTTCAGCCCAGCCAACCTTAGAAAGCCATTGAAAAGAGTTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR TCA 72 bp TCCTGTCACACTTCAGTGTGGCCTATAGGCCCTAAGTaGTGTAGCCTTTGCTTATATTGTCTTCCACTCTCA +
Preference number: 3 (lower is better)
Translates to: SCHTSVWPIGPK*CSLCLYCLPLS
Trigger: TGAGAGTGGAAGACAATATAAGCAAAGGCTACATCACTTAGGGCCTATAGGCCACACTGAAGTGTGACAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR TCA 72 bp AGAAACACCATCACAGATGTACCTAGAAATGTTGTTTaGCCAGCTATCAAGGCATCCCGTAGCCTAGTCAAG +
Preference number: 3 (lower is better)
Translates to: RNTITDVPRNVV*PAIKASRSLVK
Trigger: CTTGACTAGGCTACGGGATGCCTTGATAGCTGGTCAAACAACATTTCTAGGTACATCTGTGATGGTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR CCA 72 bp CATCCTTGTTCACAGAGCTCTAGCAATTCTCATGTTTaGAGGTCCTCAAGGCAAAACTCAGCTTTATTTCCC +
Preference number: 3 (lower is better)
Translates to: HPCSQSSSNSHV*RSSRQNSALFP
Trigger: GGGAAATAAAGCTGAGTTTTGCCTTGAGGACCTCCAAACATGAGAATTGCTAGAGCTCTGTGAACAAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR CAA 90 bp ATTCAAGTGCTAGTCTCTTCCAGAAACACCATCACAGATGTACCTAGAAATGTTAATGGCTTTCTAAGGTaGGCTGGGCTGAAATGGCAG +
Preference number: 3 (lower is better)
Translates to: IQVLVSSRNTITDVPRNVNGFLR*AGLKWQ
Trigger: CTGCCATTTCAGCCCAGCCAACCTTAGAAAGCCATT...AACATTTCTAGGTACATCTGTGATGGTGTTTCTGGAAGAGACTAGCACTTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR CCA 72 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATaGATAGGCTTCGGGAGAACCCAAGAACCAATGAAA +
Preference number: 3 (lower is better)
Translates to: AQLPHQFLIYKP*IGFGRTQEPMK
Trigger: TTTCATTGGTTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR CAA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAGCAAAAGAGAGTTTATaGTTAGAAGTCCTTGGGCAA +
Preference number: 3 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRAKESL*LEVLGQ
Trigger: TTGCCCAAGGACTTCTAACAATAAACTCTCTTTTGC...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR-3UTR CAA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAAGCAAAAGAGAGTTTATaGTTAGAAGTCCTTGGGCAA +
Preference number: 3 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQEAKESL*LEVLGQ
Trigger: TTGCCCAAGGACTTCTAACAATAAACTCTCTTTTGC...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR GCA 72 bp CTTAGTATGGAAAGCTATTTCCCTATCTGTGTGTCTTaGTTTTACATCATTGCTCTGCTCTCCTCAAAAACC +
Preference number: 3 (lower is better)
Translates to: LSMESYFPICVS*FYIIALLSSKT
Trigger: GGTTTTTGAGGAGAGCAGAGCAATGATGTAAAAGCAAGACACACAGATAGGGAAATAGCTTTCCATACTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR-3UTR CAA 90 bp TTTGCTTATATTGTCTTCCACTCTCATCCTTGTTCACAGAGCTCTAGCAATTCTCTTGCTTTTACATCATaGCTCTGCTCTCCTCAAAAA +
Preference number: 3 (lower is better)
Translates to: FAYIVFHSHPCSQSSSNSLAFTS*LCSPQK
Trigger: TTTTTGAGGAGAGCAGAGCAATGATGTAAAAGCAAG...AGAATTGCTAGAGCTCTGTGAACAAGGATGAGAGTGGAAGACAATATAAGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR TCA 72 bp GCCCTAGAATCAAACCAGTATTGGGTGAATGGATACTaGATGAAGCTTTACCTAAGTGCTTTGTCTTTTACT +
Preference number: 3 (lower is better)
Translates to: ALESNQYWVNGY*MKLYLSALSFT
Trigger: AGTAAAAGACAAAGCACTTAGGTAAAGCTTCATTCAGTATCCATTCACCCAATACTGGTTTGATTCTAGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CCA 90 bp TCTGCCTTCTGCAGGCTGAAGGCCCAGGAAAGCCAGTGTAGTTCCAAACCCGAGGTTGTGGATGCTCCGTaGCACATCACACTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: SAFCRLKAQESQCSSKPEVVDAP*HITLPL
Trigger: AAGGGGCAGTGTGATGTGCCACGGAGCATCCACAAC...CTCGGGTTTGGAACTACACTGGCTTTCCTGGGCCTTCAGCCTGCAGAAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CCA 90 bp CATGCACCCAGCTACTCGAGAGGCTGCAGCTTGAGTCCAGGAGTTCAAGGCTGCGTAACCCTAGCACTTTaGGAGGCTGAGATAGGAGAA +
Preference number: 4 (lower is better)
Translates to: HAPSYSRGCSLSPGVQGCVTLAL*EAEIGE
Trigger: TTCTCCTATCTCAGCCTCCCAAAGTGCTAGGGTTAC...GCAGCCTTGAACTCCTGGACTCAAGCTGCAGCCTCTCGAGTAGCTGGGTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CCA 90 bp TCTGCCTTCTGCAGGCTGAAGGCCCAGGAAAGCCAGTGTAGTTCCAAACCCGAGTTTCATGAGTGCCCATaGGACAGACAGGGAGAAATG +
Preference number: 4 (lower is better)
Translates to: SAFCRLKAQESQCSSKPEFHECP*DRQGEM
Trigger: CATTTCTCCCTGTCTGTCCCATGGGCACTCATGAAA...CTCGGGTTTGGAACTACACTGGCTTTCCTGGGCCTTCAGCCTGCAGAAGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR TCA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAGGTGGGAGAACTGCTTaGGCCCAGGAGGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRGGRTA*AQEGKQ
Trigger: CTGCTTTCCCTCCTGGGCTCAAGCAGTTCTCCCACC...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR TCA 90 bp TCTGCCTTCTGCAGGCTGAAGGCCCAGGAAAGCCAGTGTAGTTCCAAACCCGAGAATTTGACCCTCACTTaGGGCTTTTGTACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: SAFCRLKAQESQCSSKPENLTLT*GFCTED
Trigger: ATCCTCTGTACAAAAGCCTCAAGTGAGGGTCAAATT...CTCGGGTTTGGAACTACACTGGCTTTCCTGGGCCTTCAGCCTGCAGAAGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR TCA 90 bp CAGATTATGAGAAATTGGCTCTGCAAAATGGAGGTGAAGTCCCACAGTCTGCCTAGAAGAAATAAGACGTaGGCCACCGCGCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QIMRNWLCKMEVKSHSLPRRNKT*ATAPSL
Trigger: GAGGCTGGGCGCGGTGGCTCACGTCTTATTTCTTCT...AGGCAGACTGTGGGACTTCACCTCCATTTTGCAGAGCCAATTTCTCATAATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR GCA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGAGGGGCCGCGCGACCCTaGGCCACTCTTTTCGAGCTC +
Preference number: 4 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRGAARP*ATLFEL
Trigger: GAGCTCGAAAAGAGTGGCGCAGGGTCGCGCGGCCCC...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000399688.7
CDS-3UTR CCA 90 bp TCTGCCTTCTGCAGGCTGAAGGCCCAGGAAAGCCAGTGTAGTTCCAAACCCGAGCAAGAGCTACAGGCTTaGAAGATGAATAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: SAFCRLKAQESQCSSKPEQELQA*KMNKVG
Trigger: CCCAACTTTATTCATCTTCCAAGCCTGTAGCTCTTG...CTCGGGTTTGGAACTACACTGGCTTTCCTGGGCCTTCAGCCTGCAGAAGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CCA 90 bp CATGCACCCAGCTACTCGAGAGGCTGCAGCTTGAGTCCAGGAGTTCAAGGCTGCGCCTGTCATCACGGCTaGCTACTTTTTGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: HAPSYSRGCSLSPGVQGCACHHG*LLFVFL
Trigger: TAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGC...GCAGCCTTGAACTCCTGGACTCAAGCTGCAGCCTCTCGAGTAGCTGGGTGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR TCA 90 bp GTATGTCAAGCCTCTGCTCAAACTGAGTTTTTCCTGTCACACTTCAGTGTGGCCGCTCACCCACATGGGTaGAGGCAGTCTTCTTTACTC +
Preference number: 4 (lower is better)
Translates to: VCQASAQTEFFLSHFSVAAHPHG*RQSSLL
Trigger: GAGTAAAGAAGACTGCCTTCACCCATGTGGGTGAGC...GGCCACACTGAAGTGTGACAGGAAAAACTCAGTTTGAGCAGAGGCTTGACATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CCA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTCAAGTCTTGACGGCCTaGGGGAAGCATGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSQVLTA*GKHAGK
Trigger: CTTCCCTGCATGCTTCCCCCAGGCCGTCAAGACTTG...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264221.6
ENST00000514888.5
CDS-3UTR TCA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAAGGTGGGAGAACTGCTTaGGCCCAGGAGGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQEGGRTA*AQEGKQ
Trigger: CTGCTTTCCCTCCTGGGCTCAAGCAGTTCTCCCACC...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR TCA 90 bp TCTGCCTTCTGCAGGCTGAAGGCCCAGGAAAGCCAGTGTAGTTCCAAACCCGAGATTCTCACAACTTTATaGGGTGGTATTAGTCGCATT +
Preference number: 4 (lower is better)
Translates to: SAFCRLKAQESQCSSKPEILTTL*GGISRI
Trigger: AATGCGACTAATACCACCTCATAAAGTTGTGAGAAT...CTCGGGTTTGGAACTACACTGGCTTTCCTGGGCCTTCAGCCTGCAGAAGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR TCA 90 bp CAGATTATGAGAAATTGGCTCTGCAAAATGGAGGTGAAGTCCCACAGTCTGCCTTCCACCCCAAGTATTTaGGGTGTGGGAAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: QIMRNWLCKMEVKSHSLPSTPSI*GVGSWM
Trigger: CATCCAGCTTCCCACACCTCAAATACTTGGGGTGGA...AGGCAGACTGTGGGACTTCACCTCCATTTTGCAGAGCCAATTTCTCATAATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR TCA 90 bp TGGACAAGGGCTTTGCTCAGTCCTATTTTCCTAGGCCCTAGAATCAAACCAGTACCTCAATGGATTAGATaGCGCTCACCCACATGGGTG +
Preference number: 4 (lower is better)
Translates to: WTRALLSPIFLGPRIKPVPQWIR*RSPTWV
Trigger: CACCCATGTGGGTGAGCGTCATCTAATCCATTGAGG...TACTGGTTTGATTCTAGGGCCTAGGAAAATAGGACTGAGCAAAGCCCTTGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR TCA 90 bp TTTGCTTATATTGTCTTCCACTCTCATCCTTGTTCACAGAGCTCTAGCAATTCTCTGCCTTCTGCAGGCTaGAGGCCCAGGAAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: FAYIVFHSHPCSQSSSNSLPSAG*RPRKAS
Trigger: ACTGGCTTTCCTGGGCCTTCAGCCTGCAGAAGGCAG...AGAATTGCTAGAGCTCTGTGAACAAGGATGAGAGTGGAAGACAATATAAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR TCA 90 bp TGGACAAGGGCTTTGCTCAGTCCTATTTTCCTAGGCCCTAGAATCAAACCAGTATCTGCAAAATGGAGGTaGAGTCCCACAGTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: WTRALLSPIFLGPRIKPVSAKWR*SPTVCL
Trigger: AAGGCAGACTGTGGGACTTCACCTCCATTTTGCAGA...TACTGGTTTGATTCTAGGGCCTAGGAAAATAGGACTGAGCAAAGCCCTTGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR GCA 90 bp TGGACAAGGGCTTTGCTCAGTCCTATTTTCCTAGGCCCTAGAATCAAACCAGTATTCAAGCAATTCTCATaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: WTRALLSPIFLGPRIKPVFKQFS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCATGAGAATTGCTTGAA...TACTGGTTTGATTCTAGGGCCTAGGAAAATAGGACTGAGCAAAGCCCTTGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CCA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAAGCCTCCTGAGTCGCTaGGATTACAGGAATGTGCCA +
Preference number: 4 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRSLLSR*DYRNVP
Trigger: TGGCACATTCCTGTAATCCCAGCGACTCAGGAGGCT...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CCA 90 bp GTATGTCAAGCCTCTGCTCAAACTGAGTTTTTCCTGTCACACTTCAGTGTGGCCAGCCTCCCGAGTAGTTaGAATTATAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: VCQASAQTEFFLSHFSVASLPSS*NYRHAP
Trigger: TGGTGCATGCCTATAATTCCAACTACTCGGGAGGCT...GGCCACACTGAAGTGTGACAGGAAAAACTCAGTTTGAGCAGAGGCTTGACATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR TCA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTGCAGAACTCAAGTCTTaGCGGCCTGGGGGAAGCATG +
Preference number: 4 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSAELKS*RPGGSM
Trigger: CATGCTTCCCCCAGGCCGTCAAGACTTGAGTTCTGC...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264221.6
ENST00000514888.5
CDS-3UTR TCA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGAGCAGAACTCAAGTCTTaGCGGCCTGGGGGAAGCATG +
Preference number: 4 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRAELKS*RPGGSM
Trigger: CATGCTTCCCCCAGGCCGTCAAGACTTGAGTTCTGC...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264221.6
ENST00000514888.5
CDS-3UTR GCA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAAGGTGTGAGCCACTGTaGCCAGCTACCTCATCAATT +
Preference number: 4 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRRCEPL*PATSSI
Trigger: AATTGATGAGGTAGCTGGGCACAGTGGCTCACACCT...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR GCA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTAGGTGTGAGCCACTGTaGCCAGCTACCTCATCAATT +
Preference number: 4 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSRCEPL*PATSSI
Trigger: AATTGATGAGGTAGCTGGGCACAGTGGCTCACACCT...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR GCA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTTTCAAGCAATTCTCATaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSFKQFS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCATGAGAATTGCTTGAA...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR GCA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGAGGGTGTGGTAGCACATaGACCCAGCTACTCGAGAGG +
Preference number: 4 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRGCGST*TQLLER
Trigger: CCTCTCGAGTAGCTGGGTGCATGTGCTACCACACCC...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CCA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTGTCGAGAGGCTGAGGTaGGAGAACTGCTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSVERLR*ENCLSP
Trigger: TGGGCTCAAGCAGTTCTCCCACCTCAGCCTCTCGAC...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CCA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGAGTCGAGAGGCTGAGGTaGGAGAACTGCTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRVERLR*ENCLSP
Trigger: TGGGCTCAAGCAGTTCTCCCACCTCAGCCTCTCGAC...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CCA 90 bp TTTGCTTATATTGTCTTCCACTCTCATCCTTGTTCACAGAGCTCTAGCAATTCTCAGGCTGGAGTACAATaGCGCAACCTCGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: FAYIVFHSHPCSQSSSNSQAGVQ*RNLGSP
Trigger: TGGTGAGCCGAGGTTGCGCCATTGTACTCCAGCCTG...AGAATTGCTAGAGCTCTGTGAACAAGGATGAGAGTGGAAGACAATATAAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CCA 90 bp TGGACAAGGGCTTTGCTCAGTCCTATTTTCCTAGGCCCTAGAATCAAACCAGTACTTTCTAAGGTTGGCTaGGCTGAAATGGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: WTRALLSPIFLGPRIKPVLSKVG*AEMAGC
Trigger: ACAACCTGCCATTTCAGCCCAGCCAACCTTAGAAAG...TACTGGTTTGATTCTAGGGCCTAGGAAAATAGGACTGAGCAAAGCCCTTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR TCA 90 bp TGGACAAGGGCTTTGCTCAGTCCTATTTTCCTAGGCCCTAGAATCAAACCAGTATCTGACTTGCAACAGTaGGTATACCAAGAGCTACAG +
Preference number: 4 (lower is better)
Translates to: WTRALLSPIFLGPRIKPVSDLQQ*VYQELQ
Trigger: CTGTAGCTCTTGGTATACTCACTGTTGCAAGTCAGA...TACTGGTTTGATTCTAGGGCCTAGGAAAATAGGACTGAGCAAAGCCCTTGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR TCA 90 bp TGGACAAGGGCTTTGCTCAGTCCTATTTTCCTAGGCCCTAGAATCAAACCAGTAAGCCTCTGCTCAAACTaGGTTTTTCCTGTCACACTT +
Preference number: 4 (lower is better)
Translates to: WTRALLSPIFLGPRIKPVSLCSN*VFPVTL
Trigger: AAGTGTGACAGGAAAAACTCAGTTTGAGCAGAGGCT...TACTGGTTTGATTCTAGGGCCTAGGAAAATAGGACTGAGCAAAGCCCTTGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR TCA 90 bp GTATGTCAAGCCTCTGCTCAAACTGAGTTTTTCCTGTCACACTTCAGTGTGGCCCACATTTGTGTGCCATaGTGGGCCTTACATATATTG +
Preference number: 4 (lower is better)
Translates to: VCQASAQTEFFLSHFSVAHICVP*WALHIL
Trigger: CAATATATGTAAGGCCCATCATGGCACACAAATGTG...GGCCACACTGAAGTGTGACAGGAAAAACTCAGTTTGAGCAGAGGCTTGACATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR GCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGTTCAGCCTCCCGAAGTaGTGTGATCGTAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGFSLPK*CDRRCE
Trigger: CTCACACCTACGATCACAGCACTTCGGGAGGCTGAA...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR GCA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAAAGCTACTCGAGAGGCTaGAGCTTGAGTCCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQESYSRG*SLSPGV
Trigger: AACTCCTGGACTCAAGCTGCAGCCTCTCGAGTAGCT...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR GCA 90 bp GTATGTCAAGCCTCTGCTCAAACTGAGTTTTTCCTGTCACACTTCAGTGTGGCCCTCTTAACTAATCTCTaGTTCTCCTCTTGTCCACAC +
Preference number: 4 (lower is better)
Translates to: VCQASAQTEFFLSHFSVALLTNL*FSSCPH
Trigger: GTGTGGACAAGAGGAGAAGCAGAGATTAGTTAAGAG...GGCCACACTGAAGTGTGACAGGAAAAACTCAGTTTGAGCAGAGGCTTGACATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR GCA 90 bp TTTGCTTATATTGTCTTCCACTCTCATCCTTGTTCACAGAGCTCTAGCAATTCTTTCAAGCGATTCTCCTaGCTCAGCCTCCTGAGTCGC +
Preference number: 4 (lower is better)
Translates to: FAYIVFHSHPCSQSSSNSFKRFS*LSLLSR
Trigger: GCGACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAA...AGAATTGCTAGAGCTCTGTGAACAAGGATGAGAGTGGAAGACAATATAAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR GCA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAATTGCCCAGGCTGGAGTaGAATGGTTCGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQELPRLE*NGSISA
Trigger: AGCTGAGATCGAACCATTGCACTCCAGCCTGGGCAA...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CCA 90 bp TTTGCTTATATTGTCTTCCACTCTCATCCTTGTTCACAGAGCTCTAGCAATTCTTTGGCTGGGCTGAAATaGCAGGTTGTGGATGCTCCG +
Preference number: 4 (lower is better)
Translates to: FAYIVFHSHPCSQSSSNSLAGLK*QVVDAP
Trigger: CGGAGCATCCACAACCTGCCATTTCAGCCCAGCCAA...AGAATTGCTAGAGCTCTGTGAACAAGGATGAGAGTGGAAGACAATATAAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR GCA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACGGAGATTTCCACGTaGAGCAAATACAGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRTEIST*SKYSFP
Trigger: TGGAAAGCTGTATTTGCTGCACGTGGAAATCTCCGT...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264221.6
ENST00000514888.5
CDS-3UTR GCA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTATTAGCTCGGCATGGTaGTGCAAGATTATAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSISSAW*CKIIVP
Trigger: AGGGACTATAATCTTGCAGCACCATGCCGAGCTAAT...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR GCA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAAAGGTGTGAGCCACTGTaGCCAGCTACCTCATCAATT +
Preference number: 4 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQERCEPL*PATSSI
Trigger: AATTGATGAGGTAGCTGGGCACAGTGGCTCACACCT...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR GCA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGATTCAGCCTCCCGAAGTaGTGTGATCGTAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRFSLPK*CDRRCE
Trigger: CTCACACCTACGATCACAGCACTTCGGGAGGCTGAA...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR GCA 90 bp TTTGCTTATATTGTCTTCCACTCTCATCCTTGTTCACAGAGCTCTAGCAATTCTTTCAGCCTCCCGAAGTaGTGTGATCGTAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: FAYIVFHSHPCSQSSSNSFSLPK*CDRRCE
Trigger: CTCACACCTACGATCACAGCACTTCGGGAGGCTGAA...AGAATTGCTAGAGCTCTGTGAACAAGGATGAGAGTGGAAGACAATATAAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR GCA 90 bp GTATGTCAAGCCTCTGCTCAAACTGAGTTTTTCCTGTCACACTTCAGTGTGGCCCATAACACATTTGTGTaGCATGATGGGCCTTACATA +
Preference number: 4 (lower is better)
Translates to: VCQASAQTEFFLSHFSVAHNTFV*HDGPYI
Trigger: TATGTAAGGCCCATCATGGCACACAAATGTGTTATG...GGCCACACTGAAGTGTGACAGGAAAAACTCAGTTTGAGCAGAGGCTTGACATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR GCA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGAGCTCACCACAACCTCTaGCTTCCAGGTTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRAHHNL*LPGSSD
Trigger: ATCGCTTGAACCTGGAAGGCAGAGGTTGTGGTGAGC...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CCA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGACCATTACGCTACTGTTaGGTGCTGGAAAATAACGGA +
Preference number: 4 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRPLRYC*VLENNG
Trigger: TCCGTTATTTTCCAGCACCCAACAGTAGCGTAATGG...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264221.6
ENST00000514888.5
CDS-3UTR CCA 90 bp GTATGTCAAGCCTCTGCTCAAACTGAGTTTTTCCTGTCACACTTCAGTGTGGCCGAAATTGTCTGCCTCTaGAGACTTCCAAGATTCATT +
Preference number: 4 (lower is better)
Translates to: VCQASAQTEFFLSHFSVAEIVCL*RLPRFI
Trigger: AATGAATCTTGGAAGTCTCCAGAGGCAGACAATTTC...GGCCACACTGAAGTGTGACAGGAAAAACTCAGTTTGAGCAGAGGCTTGACATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR TCA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGATACAGGCTTGGAAGATaGATAAAGTTGGGAGCATTC +
Preference number: 4 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRYRLGR*IKLGAF
Trigger: GAATGCTCCCAACTTTATTCATCTTCCAAGCCTGTA...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR TCA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGACCTATAGGCCCTAAGTaGTGTAGCCTTTGCTTATAT +
Preference number: 4 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRPIGPK*CSLCLY
Trigger: ATATAAGCAAAGGCTACATCACTTAGGGCCTATAGG...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR TCA 90 bp CAGATTATGAGAAATTGGCTCTGCAAAATGGAGGTGAAGTCCCACAGTCTGCCTTTAATGGATTTAGCCTaGGAAGCTTCCATGTACAGT +
Preference number: 4 (lower is better)
Translates to: QIMRNWLCKMEVKSHSLPLMDLA*EASMYS
Trigger: ACTGTACATGGAAGCTTCTCAGGCTAAATCCATTAA...AGGCAGACTGTGGGACTTCACCTCCATTTTGCAGAGCCAATTTCTCATAATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR GCA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGAAGGTGTGAGCCACTGTaGCCAGCTACCTCATCAATT +
Preference number: 4 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRRCEPL*PATSSI
Trigger: AATTGATGAGGTAGCTGGGCACAGTGGCTCACACCT...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR GCA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTTTCAAGCAATTCTCATaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSFKQFS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCATGAGAATTGCTTGAA...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR GCA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTATGAGAAATTGGCTCTaGAAAATGGAGGTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSMRNWL*KMEVKS
Trigger: GGACTTCACCTCCATTTTGCAGAGCCAATTTCTCAT...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CCA 90 bp TCTTCCACTCTCATCCTTGTTCACAGAGCTCTAGCAATTCTCATGTTTGGAGGTCTGGAGAAATATAGCTaGGAGTCAGTAATGCCAGTT +
Preference number: 4 (lower is better)
Translates to: SSTLILVHRALAILMFGGLEKYS*ESVMPV
Trigger: AACTGGCATTACTGACTCCCAGCTATATTTCTCCAG...ACCTCCAAACATGAGAATTGCTAGAGCTCTGTGAACAAGGATGAGAGTGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CCA 90 bp TGGACAAGGGCTTTGCTCAGTCCTATTTTCCTAGGCCCTAGAATCAAACCAGTAAAAATTAGCTCGGCATaGTGCTGCAAGATTATAGTC +
Preference number: 4 (lower is better)
Translates to: WTRALLSPIFLGPRIKPVKISSA*CCKIIV
Trigger: GACTATAATCTTGCAGCACCATGCCGAGCTAATTTT...TACTGGTTTGATTCTAGGGCCTAGGAAAATAGGACTGAGCAAAGCCCTTGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CCA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAAGTAACCCTAGCACTTTaGGAGGCTGAGATAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQEVTLAL*EAEIGE
Trigger: TTCTCCTATCTCAGCCTCCCAAAGTGCTAGGGTTAC...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR TCA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTGCAGGGAAGGGCATATaGAGGCTAAATGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSAGKGI*RLNALK
Trigger: TTTCAGAGCATTTAGCCTTCATATGCCCTTCCCTGC...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264221.6
ENST00000514888.5
CDS-3UTR TCA 90 bp TGGACAAGGGCTTTGCTCAGTCCTATTTTCCTAGGCCCTAGAATCAAACCAGTAATGAAATCAAGCTTCTaGCTTGCAACAGTGAGTATA +
Preference number: 4 (lower is better)
Translates to: WTRALLSPIFLGPRIKPVMKSSF*LATVSI
Trigger: TATACTCACTGTTGCAAGTCAGAAGCTTGATTTCAT...TACTGGTTTGATTCTAGGGCCTAGGAAAATAGGACTGAGCAAAGCCCTTGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR TCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGCCTAGAAATGTTGTTTaGCCAGCTATCAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGPRNVV*PAIKAS
Trigger: GGATGCCTTGATAGCTGGTCAAACAACATTTCTAGG...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR GCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGACGGAGATTTCCACGTaGAGCAAATACAGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGTEIST*SKYSFP
Trigger: TGGAAAGCTGTATTTGCTGCACGTGGAAATCTCCGT...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264221.6
ENST00000514888.5
CDS-3UTR GCA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAATCAAGCTTCTGACTTaGAACAGTGAGTATACCAAG +
Preference number: 4 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRIKLLT*NSEYTK
Trigger: CTTGGTATACTCACTGTTGCAAGTCAGAAGCTTGAT...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGGCTACTGTTGGGTGCTaGAAAATAACGGAGATTTCC +
Preference number: 4 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGATVGC*KITEIS
Trigger: GGAAATCTCCGTTATTTTCCAGCACCCAACAGTAGC...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264221.6
ENST00000514888.5
CDS-3UTR CCA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTGTAACCCTAGCACTTTaGGAGGCTGAGATAGGAGAA +
Preference number: 4 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSVTLAL*EAEIGE
Trigger: TTCTCCTATCTCAGCCTCCCAAAGTGCTAGGGTTAC...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CCA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGAGTAACCCTAGCACTTTaGGAGGCTGAGATAGGAGAA +
Preference number: 4 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRVTLAL*EAEIGE
Trigger: TTCTCCTATCTCAGCCTCCCAAAGTGCTAGGGTTAC...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CCA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGATTTCATGAGTGCCCATaGGACAGACAGGGAGAAATG +
Preference number: 4 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRFHECP*DRQGEM
Trigger: CATTTCTCCCTGTCTGTCCCATGGGCACTCATGAAA...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CCA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTTTAATCTATAAACCATaGATAGGCTTCGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSLIYKP*IGFGRT
Trigger: GGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAA...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CCA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAGCCTGTCATCACGGCTaGCTACTTTTTGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRACHHG*LLFVFL
Trigger: TAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGC...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CCA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTGCCTGTCATCACGGCTaGCTACTTTTTGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSACHHG*LLFVFL
Trigger: TAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGC...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CCA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGATTACAGAAGGTTTCATaGACAGCGAACATAAAGCTC +
Preference number: 4 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRLQKVS*TANIKL
Trigger: GAGCTTTATGTTCGCTGTCCATGAAACCTTCTGTAA...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR TCA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAAGGAGAAATGGACAGTTaGAAGTACAAGTCTAGACAG +
Preference number: 4 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQEGEMDS*KYKSRQ
Trigger: CTGTCTAGACTTGTACTTTCAACTGTCCATTTCTCC...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR TCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGGGAGAAATGGACAGTTaGAAGTACAAGTCTAGACAG +
Preference number: 4 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGGEMDS*KYKSRQ
Trigger: CTGTCTAGACTTGTACTTTCAACTGTCCATTTCTCC...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR TCA 90 bp CCTATTTTCCTAGGCCCTAGAATCAAACCAGTATTGGGTGAATGGATACTGAATGGAGAAATGGACAGTTaGAAGTACAAGTCTAGACAG +
Preference number: 4 (lower is better)
Translates to: PIFLGPRIKPVLGEWILNGEMDS*KYKSRQ
Trigger: CTGTCTAGACTTGTACTTTCAACTGTCCATTTCTCC...ATTCAGTATCCATTCACCCAATACTGGTTTGATTCTAGGGCCTAGGAAAATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR GCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGTACGCTACTGTTGGGTaGTGGAAAATAACGGAGATT +
Preference number: 4 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGYATVG*WKITEI
Trigger: AATCTCCGTTATTTTCCAGCACCCAACAGTAGCGTA...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264221.6
ENST00000514888.5
CDS-3UTR GCA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGAATTAGCTCGGCATGGTaGTGCAAGATTATAGTCCCT +
Preference number: 4 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRISSAW*CKIIVP
Trigger: AGGGACTATAATCTTGCAGCACCATGCCGAGCTAAT...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR GCA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAAGGTAAGTTTTATGTGTaGGGTTTTCTACAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQEGKFYV*GFLQRG
Trigger: CCCTCTCTGTAGAAAACCGCACACATAAAACTTACC...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR GCA 90 bp CCTATTTTCCTAGGCCCTAGAATCAAACCAGTATTGGGTGAATGGATACTGAATGGTAAGTTTTATGTGTaGGGTTTTCTACAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PIFLGPRIKPVLGEWILNGKFYV*GFLQRG
Trigger: CCCTCTCTGTAGAAAACCGCACACATAAAACTTACC...ATTCAGTATCCATTCACCCAATACTGGTTTGATTCTAGGGCCTAGGAAAATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR GCA 90 bp ATTCAAGTGCTAGTCTCTTCCAGAAACACCATCACAGATGTACCTAGAAATGTTCGTGGCACATCACACTaGCCCTTTCTTCATATTAGA +
Preference number: 4 (lower is better)
Translates to: IQVLVSSRNTITDVPRNVRGTSH*PFLHIR
Trigger: TCTAATATGAAGAAAGGGGCAGTGTGATGTGCCACG...AACATTTCTAGGTACATCTGTGATGGTGTTTCTGGAAGAGACTAGCACTTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CCA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGAGCTACTGTTGGGTGCTaGAAAATAACGGAGATTTCC +
Preference number: 4 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRATVGC*KITEIS
Trigger: GGAAATCTCCGTTATTTTCCAGCACCCAACAGTAGC...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264221.6
ENST00000514888.5
CDS-3UTR CCA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTCCATTACGCTACTGTTaGGTGCTGGAAAATAACGGA +
Preference number: 4 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSPLRYC*VLENNG
Trigger: TCCGTTATTTTCCAGCACCCAACAGTAGCGTAATGG...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264221.6
ENST00000514888.5
CDS-3UTR CCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGCTGGAGAAATATAGCTaGGAGTCAGTAATGCCAGTT +
Preference number: 4 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGLEKYS*ESVMPV
Trigger: AACTGGCATTACTGACTCCCAGCTATATTTCTCCAG...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR TCA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTTACAGGCTTGGAAGATaGATAAAGTTGGGAGCATTC +
Preference number: 4 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSYRLGR*IKLGAF
Trigger: GAATGCTCCCAACTTTATTCATCTTCCAAGCCTGTA...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR TCA 90 bp ATTCAAGTGCTAGTCTCTTCCAGAAACACCATCACAGATGTACCTAGAAATGTTTACAGGCTTGGAAGATaGATAAAGTTGGGAGCATTC +
Preference number: 4 (lower is better)
Translates to: IQVLVSSRNTITDVPRNVYRLGR*IKLGAF
Trigger: GAATGCTCCCAACTTTATTCATCTTCCAAGCCTGTA...AACATTTCTAGGTACATCTGTGATGGTGTTTCTGGAAGAGACTAGCACTTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR TCA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAACTTTTGTACAGAGGATaGGAAGACGGTAAATTCAAG +
Preference number: 4 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQELLYRG*EDGKFK
Trigger: CTTGAATTTACCGTCTTCTCATCCTCTGTACAAAAG...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR GCA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGACAAAGAAGTCTGTGGTaGAAAAGAGAGTTTATTGTT +
Preference number: 4 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRQRSLW*KREFIV
Trigger: AACAATAAACTCTCTTTTGCACCACAGACTTCTTTG...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR GCA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGAGGTAAGTTTTATGTGTaGGGTTTTCTACAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRGKFYV*GFLQRG
Trigger: CCCTCTCTGTAGAAAACCGCACACATAAAACTTACC...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR GCA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAACCTATCTGTGTGTCTTaGTTTTACATCATTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQEPICVS*FYIIAL
Trigger: CAGAGCAATGATGTAAAAGCAAGACACACAGATAGG...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CCA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGACAAGAGCTACAGGCTTaGAAGATGAATAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRQELQA*KMNKVG
Trigger: CCCAACTTTATTCATCTTCCAAGCCTGTAGCTCTTG...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CCA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAATTAATCTATAAACCATaGATAGGCTTCGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQELIYKP*IGFGRT
Trigger: GGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAA...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGGCCTGTCATCACGGCTaGCTACTTTTTGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGACHHG*LLFVFL
Trigger: TAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGC...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CCA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGATTAATGATAAAAACGTaGGCCTTCAGAGAACTAAAG +
Preference number: 4 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRLMIKT*AFRELK
Trigger: CTTTAGTTCTCTGAAGGCCCACGTTTTTATCATTAA...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGTTACAGAAGGTTTCATaGACAGCGAACATAAAGCTC +
Preference number: 4 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGLQKVS*TANIKL
Trigger: GAGCTTTATGTTCGCTGTCCATGAAACCTTCTGTAA...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CCA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTAACATAAGTTCCATCTaGACAAGGGCTTTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSNISSI*TRALLS
Trigger: ACTGAGCAAAGCCCTTGTCCAGATGGAACTTATGTT...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGCCCATTCCCTTAGTATaGAAAGCTATTTCCCTATCT +
Preference number: 4 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGPIPLV*KAISLS
Trigger: AGATAGGGAAATAGCTTTCCATACTAAGGGAATGGG...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512576.3
3UTR CAA 72 bp TACAGAACCAATAGGATATGTACAGATTATGAGAAATaGGCTCTGCAAAATGGAGGTGAAGTCCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: YRTNRICTDYEK*ALQNGGEVPQS
Trigger: AGACTGTGGGACTTCACCTCCATTTTGCAGAGCCAATTTCTCATAATCTGTACATATCCTATTGGTTCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR TCA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAAATGAAATCAAGCTTCTaGCTTGCAACAGTGAGTATA +
Preference number: 4 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQEMKSSF*LATVSI
Trigger: TATACTCACTGTTGCAAGTCAGAAGCTTGATTTCAT...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR TCA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAAAGCCGATGGCAATATTaGATTCCAGGTAATTTTCTT +
Preference number: 4 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQESRWQY*IPGNFL
Trigger: AAGAAAATTACCTGGAATTCAATATTGCCATCGGCT...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR GCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGCATATGAAGGCTAAATaGTCTGAAAGAGAAATGAGG +
Preference number: 4 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGHMKAK*SEREMR
Trigger: CCTCATTTCTCTTTCAGAGCATTTAGCCTTCATATG...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264221.6
ENST00000514888.5
CDS-3UTR GCA 90 bp TTTGCTTATATTGTCTTCCACTCTCATCCTTGTTCACAGAGCTCTAGCAATTCTTTTACATCATTGCTCTaGTCTCCTCAAAAACCTTCC +
Preference number: 4 (lower is better)
Translates to: FAYIVFHSHPCSQSSSNSFTSLL*SPQKPS
Trigger: GGAAGGTTTTTGAGGAGAGCAGAGCAATGATGTAAA...AGAATTGCTAGAGCTCTGTGAACAAGGATGAGAGTGGAAGACAATATAAGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR GCA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGATGTTTTGAAATTGTCTaGCTCTGGAGACTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRCFEIV*LWRLPR
Trigger: TCTTGGAAGTCTCCAGAGGCAGACAATTTCAAAACA...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CCA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGAAAAATTAGCTCGGCATaGTGCTGCAAGATTATAGTC +
Preference number: 4 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRKISSA*CCKIIV
Trigger: GACTATAATCTTGCAGCACCATGCCGAGCTAATTTT...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CCA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTAAAATTAGCTCGGCATaGTGCTGCAAGATTATAGTC +
Preference number: 4 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSKISSA*CCKIIV
Trigger: GACTATAATCTTGCAGCACCATGCCGAGCTAATTTT...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CCA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGATTAATCTATAAACCATaGATAGGCTTCGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRLIYKP*IGFGRT
Trigger: GGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAA...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CCA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTTTAATCTATAAACCATaGATAGGCTTCGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSLIYKP*IGFGRT
Trigger: GGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAA...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CCA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGATTACAGAAGGTTTCATaGACAGCGAACATAAAGCTC +
Preference number: 4 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRLQKVS*TANIKL
Trigger: GAGCTTTATGTTCGCTGTCCATGAAACCTTCTGTAA...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR GCA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGCAAAGAAGTCTGTGGTaGAAAAGAGAGTTTATTGTT +
Preference number: 4 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGQRSLW*KREFIV
Trigger: AACAATAAACTCTCTTTTGCACCACAGACTTCTTTG...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR CAA 72 bp TTCTTCAGTCTGCCAAATGGATATTACATAACACATTaGTGTGCCATGATGGGCCTTACATATATTGACTCA +
Preference number: 4 (lower is better)
Translates to: FFSLPNGYYITH*CAMMGLTYIDS
Trigger: TGAGTCAATATATGTAAGGCCCATCATGGCACACAAATGTGTTATGTAATATCCATTTGGCAGACTGAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR GCA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGACAAAGAAGTCTGTGGTaGAAAAGAGAGTTTATTGTT +
Preference number: 4 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRQRSLW*KREFIV
Trigger: AACAATAAACTCTCTTTTGCACCACAGACTTCTTTG...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR GCA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTCAAAGAAGTCTGTGGTaGAAAAGAGAGTTTATTGTT +
Preference number: 4 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSQRSLW*KREFIV
Trigger: AACAATAAACTCTCTTTTGCACCACAGACTTCTTTG...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CCA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGATTAATGATAAAAACGTaGGCCTTCAGAGAACTAAAG +
Preference number: 4 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRLMIKT*AFRELK
Trigger: CTTTAGTTCTCTGAAGGCCCACGTTTTTATCATTAA...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CCA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTTTAATGATAAAAACGTaGGCCTTCAGAGAACTAAAG +
Preference number: 4 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSLMIKT*AFRELK
Trigger: CTTTAGTTCTCTGAAGGCCCACGTTTTTATCATTAA...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
3UTR CAA 72 bp AGACTTCCAAGATTCATTGAGAGCAGAAGGTTAATTTaGTTCATCTTTGCATTCCCAGGGTCTTATATATAC +
Preference number: 4 (lower is better)
Translates to: RLPRFIESRRLI*FIFAFPGSYIY
Trigger: GTATATATAAGACCCTGGGAATGCAAAGATGAACAAAATTAACCTTCTGCTCTCAATGAATCTTGGAAGTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS CCA 90 bp GCAGAACTCCCGGCCCCTTCTCGGCTGCGGGAGCGACTCAGAAGTTaGAGCGTACCAAGTCTTGACGGCCTGGGGGAAGCATGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: AELPAPSRLRERLRS*SVPSLDGLGEACRE
Trigger: TTCCCTGCATGCTTCCCCCAGGCCGTCAAGACTTGGTACGCTCCAACTTCTGAGTCGCTCCCGCAGCCGAGAAGGGGCCGGGAGTTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505164.5
CDS-3UTR CAA 90 bp CATGCACCCAGCTACTCGAGAGGCTGCAGCTTGAGTCCAGGAGTTCAAGGCTGCAATGGCTTTCTAAGGTaGGCTGGGCTGAAATGGCAG +
Preference number: 5 (lower is better)
Translates to: HAPSYSRGCSLSPGVQGCNGFLR*AGLKWQ
Trigger: CTGCCATTTCAGCCCAGCCAACCTTAGAAAGCCATT...GCAGCCTTGAACTCCTGGACTCAAGCTGCAGCCTCTCGAGTAGCTGGGTGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS GCA 90 bp CGGGAAGCGAGGCAGAACTCAAGTCTTGACGGCCTGGGGGAAGCATaGAGGGAAGGGCATATGAAGGCTAAATGCTCTGAAAGAGAAATG +
Preference number: 5 (lower is better)
Translates to: REARQNSSLDGLGEA*REGHMKAKCSEREM
Trigger: CATTTCTCTTTCAGAGCATTTAGCCTTCATATGCCCTTCCCTGCATGCTTCCCCCAGGCCGTCAAGACTTGAGTTCTGCCTCGCTTCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264221.6
ENST00000514888.5
CDS-3UTR CAA 90 bp CATGCACCCAGCTACTCGAGAGGCTGCAGCTTGAGTCCAGGAGTTCAAGGCTGCCCCTATCTGTGTGTCTaGCTTTTACATCATTGCTCT +
Preference number: 5 (lower is better)
Translates to: HAPSYSRGCSLSPGVQGCPYLCV*LLHHCS
Trigger: AGAGCAATGATGTAAAAGCAAGACACACAGATAGGG...GCAGCCTTGAACTCCTGGACTCAAGCTGCAGCCTCTCGAGTAGCTGGGTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS GCA 90 bp CTCAGAAGTTGGAGCGTACCAAGTCTTGACGGCCTGGGGGAAGCATaGAGGGAAGGGCATATGAAGGCTAAATGCTCTGAAAGAGAAATG +
Preference number: 5 (lower is better)
Translates to: LRSWSVPSLDGLGEA*REGHMKAKCSEREM
Trigger: CATTTCTCTTTCAGAGCATTTAGCCTTCATATGCCCTTCCCTGCATGCTTCCCCCAGGCCGTCAAGACTTGGTACGCTCCAACTTCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505164.5
CDS-3UTR CAA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTGGCAGAACTCAAGTCTaGACGGCCTGGGGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSGRTQV*TAWGKH
Trigger: ATGCTTCCCCCAGGCCGTCAAGACTTGAGTTCTGCC...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000264221.6
ENST00000514888.5
CDS-3UTR CAA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTGGCAGAACTCAAGTCTaGACGGCCTGGGGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSGRTQV*TAWGKH
Trigger: ATGCTTCCCCCAGGCCGTCAAGACTTGAGTTCTGCC...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264221.6
ENST00000514888.5
CDS-3UTR CAA 90 bp ATGTGTGCGGTTTTCTACAGAGAGGGTCAACAGCATGTATATTTTCAAAGAAGTTCGAGAGGCTGCAGCTaGAGTCCAGGAGTTCAAGGC +
Preference number: 5 (lower is better)
Translates to: MCAVFYREGQQHVYFQRSSRGCS*SPGVQG
Trigger: GCCTTGAACTCCTGGACTCAAGCTGCAGCCTCTCGA...ACTTCTTTGAAAATATACATGCTGTTGACCCTCTCTGTAGAAAACCGCACACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CAA 90 bp GTATGTCAAGCCTCTGCTCAAACTGAGTTTTTCCTGTCACACTTCAGTGTGGCCCGTAGCCTAGTCAAGTaGACAGAATTAGCCATCTCA +
Preference number: 5 (lower is better)
Translates to: VCQASAQTEFFLSHFSVARSLVK*TELAIS
Trigger: TGAGATGGCTAATTCTGTCAACTTGACTAGGCTACG...GGCCACACTGAAGTGTGACAGGAAAAACTCAGTTTGAGCAGAGGCTTGACATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS CCA 90 bp GAAAGAGAAATGAGGTTAAGTCCGTTACTCCCATTACGCTACTGTTaGGTGCTGGAAAATAACGGAGATTTCCACGTGCAGCAAATACAG +
Preference number: 5 (lower is better)
Translates to: EREMRLSPLLPLRYC*VLENNGDFHVQQIQ
Trigger: CTGTATTTGCTGCACGTGGAAATCTCCGTTATTTTCCAGCACCCAACAGTAGCGTAATGGGAGTAACGGACTTAACCTCATTTCTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264221.6
ENST00000505164.5
ENST00000514888.5
CDS-3UTR CAA 90 bp TGGACAAGGGCTTTGCTCAGTCCTATTTTCCTAGGCCCTAGAATCAAACCAGTAGCAAAAGAGAGTTTATaGTTAGAAGTCCTTGGGCAA +
Preference number: 5 (lower is better)
Translates to: WTRALLSPIFLGPRIKPVAKESL*LEVLGQ
Trigger: TTGCCCAAGGACTTCTAACAATAAACTCTCTTTTGC...TACTGGTTTGATTCTAGGGCCTAGGAAAATAGGACTGAGCAAAGCCCTTGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CAA 90 bp AAAAATAAAATTAGCTCGGCATGGTGCTGCAAGATTATAGTCCCTGTTAGTCGATTCCACCCCAAGTATTaGAGGTGTGGGAAGCTGGAT +
Preference number: 5 (lower is better)
Translates to: KNKISSAWCCKIIVPVSRFHPKY*RCGKLD
Trigger: ATCCAGCTTCCCACACCTCAAATACTTGGGGTGGAA...TCGACTAACAGGGACTATAATCTTGCAGCACCATGCCGAGCTAATTTTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CAA 90 bp CAGATTATGAGAAATTGGCTCTGCAAAATGGAGGTGAAGTCCCACAGTCTGCCTGAGTCCTTCCTACTTTaGTGTATTCACAATACCCTA +
Preference number: 5 (lower is better)
Translates to: QIMRNWLCKMEVKSHSLPESFLL*CIHNTL
Trigger: TAGGGTATTGTGAATACACAAAAGTAGGAAGGACTC...AGGCAGACTGTGGGACTTCACCTCCATTTTGCAGAGCCAATTTCTCATAATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CAA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTGCAAAAGAGAGTTTATaGTTAGAAGTCCTTGGGCAA +
Preference number: 5 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSAKESL*LEVLGQ
Trigger: TTGCCCAAGGACTTCTAACAATAAACTCTCTTTTGC...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CAA 90 bp TCTTCCACTCTCATCCTTGTTCACAGAGCTCTAGCAATTCTCATGTTTGGAGGTCTTGCTTTTACATCATaGCTCTGCTCTCCTCAAAAA +
Preference number: 5 (lower is better)
Translates to: SSTLILVHRALAILMFGGLAFTS*LCSPQK
Trigger: TTTTTGAGGAGAGCAGAGCAATGATGTAAAAGCAAG...ACCTCCAAACATGAGAATTGCTAGAGCTCTGTGAACAAGGATGAGAGTGGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CAA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAACCTTCTTCCCCTTTTTaGTTCTATTCAGGCCCTCAA +
Preference number: 5 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQEPSSPF*FYSGPQ
Trigger: TTGAGGGCCTGAATAGAACAAAAAAGGGGAAGAAGG...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CAA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAAGAATCAAACCAGTATaGGGTGAATGGATACTGAAT +
Preference number: 5 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRRIKPV*GEWILN
Trigger: ATTCAGTATCCATTCACCCAATACTGGTTTGATTCT...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CAA 90 bp GCCCAGCTACCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGATGGGCCTTACATATATaGACTCATGTAATTCTCACA +
Preference number: 5 (lower is better)
Translates to: AQLPHQFLIYKPWIGFGRWALHI*THVILT
Trigger: TGTGAGAATTACATGAGTCAATATATGTAAGGCCCA...TCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGGTAGCTGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CAA 90 bp AGCTGGGATTACAGGTGCCTGTCATCACGGCTGGCTACTTTTTGTATTTTTAGTAGCAGAAGGTTAATTTaGTTCATCTTTGCATTCCCA +
Preference number: 5 (lower is better)
Translates to: SWDYRCLSSRLATFCIFSSRRLI*FIFAFP
Trigger: TGGGAATGCAAAGATGAACAAAATTAACCTTCTGCT...ACTAAAAATACAAAAAGTAGCCAGCCGTGATGACAGGCACCTGTAATCCCAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CAA 90 bp TTTGCTTATATTGTCTTCCACTCTCATCCTTGTTCACAGAGCTCTAGCAATTCTTACGGTGTTTTGAAATaGTCTGCCTCTGGAGACTTC +
Preference number: 5 (lower is better)
Translates to: FAYIVFHSHPCSQSSSNSYGVLK*SASGDF
Trigger: GAAGTCTCCAGAGGCAGACAATTTCAAAACACCGTA...AGAATTGCTAGAGCTCTGTGAACAAGGATGAGAGTGGAAGACAATATAAGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CAA 90 bp GAACCAATGAAATCTGTTGGTAAGTTTTATGTGTGCGGTTTTCTACAGAGAGGGGCAAAAGAGAGTTTATaGTTAGAAGTCCTTGGGCAA +
Preference number: 5 (lower is better)
Translates to: EPMKSVGKFYVCGFLQRGAKESL*LEVLGQ
Trigger: TTGCCCAAGGACTTCTAACAATAAACTCTCTTTTGC...CCCTCTCTGTAGAAAACCGCACACATAAAACTTACCAACAGATTTCATTGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000264221.6
ENST00000399688.7
ENST00000512576.3
ENST00000514888.5
CDS-3UTR CAA 90 bp CCTATTTTCCTAGGCCCTAGAATCAAACCAGTATTGGGTGAATGGATACTGAATATGTACCTAGAAATGTaGTTTGACCAGCTATCAAGG +
Preference number: 5 (lower is better)
Translates to: PIFLGPRIKPVLGEWILNMYLEM*FDQLSR
Trigger: CCTTGATAGCTGGTCAAACAACATTTCTAGGTACAT...ATTCAGTATCCATTCACCCAATACTGGTTTGATTCTAGGGCCTAGGAAAATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CAA 90 bp CCTCATCAATTCTTAATCTATAAACCATGGATAGGCTTCGGGAGAACCCAAGAAACTATATACGGTGTTTaGAAATTGTCTGCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: PHQFLIYKPWIGFGRTQETIYGV*KLSASG
Trigger: TCCAGAGGCAGACAATTTCAAAACACCGTATATAGT...TTCTTGGGTTCTCCCGAAGCCTATCCATGGTTTATAGATTAAGAATTGATGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CAA 90 bp TTTGCTTATATTGTCTTCCACTCTCATCCTTGTTCACAGAGCTCTAGCAATTCTACAGATTATGAGAAATaGGCTCTGCAAAATGGAGGT +
Preference number: 5 (lower is better)
Translates to: FAYIVFHSHPCSQSSSNSTDYEK*ALQNGG
Trigger: ACCTCCATTTTGCAGAGCCAATTTCTCATAATCTGT...AGAATTGCTAGAGCTCTGTGAACAAGGATGAGAGTGGAAGACAATATAAGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS-3UTR CAA 90 bp ATTCAAGTGCTAGTCTCTTCCAGAAACACCATCACAGATGTACCTAGAAATGTTATTCCATTCATACTGTaGTTCTTCAGTCTGCCAAAT +
Preference number: 5 (lower is better)
Translates to: IQVLVSSRNTITDVPRNVIPFIL*FFSLPN
Trigger: ATTTGGCAGACTGAAGAACAACAGTATGAATGGAAT...AACATTTCTAGGTACATCTGTGATGGTGTTTCTGGAAGAGACTAGCACTTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512576.3
CDS GCA 72 bp CGGGAAGCGAGGCAGAACTCCCGGCCCCTTCTCGGCTaGGGGAGCGACTCAGAAGTTGGAGCGTACCAAGTC +
Preference number: 6 (lower is better)
Translates to: REARQNSRPLLG*GSDSEVGAYQV
Trigger: GACTTGGTACGCTCCAACTTCTGAGTCGCTCCCGCAGCCGAGAAGGGGCCGGGAGTTCTGCCTCGCTTCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505164.5
CDS CCA 72 bp CCGGCCCCTTCTCGGCTGCGGGAGCGACTCAGAAGTTaGAGCGTACCAAGTCTTGACGGCCTGGGGGAAGCA +
Preference number: 6 (lower is better)
Translates to: PAPSRLRERLRS*SVPSLDGLGEA
Trigger: TGCTTCCCCCAGGCCGTCAAGACTTGGTACGCTCCAACTTCTGAGTCGCTCCCGCAGCCGAGAAGGGGCCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505164.5
CDS TCA 72 bp GCGGGAGCGACTCAGAAGTTGGAGCGTACCAAGTCTTaGCGGCCTGGGGGAAGCATGCAGGGAAGGGCATAT +
Preference number: 6 (lower is better)
Translates to: AGATQKLERTKS*RPGGSMQGRAY
Trigger: ATATGCCCTTCCCTGCATGCTTCCCCCAGGCCGTCAAGACTTGGTACGCTCCAACTTCTGAGTCGCTCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505164.5
CDS GCA 72 bp TGGAGCGTACCAAGTCTTGACGGCCTGGGGGAAGCATaGAGGGAAGGGCATATGAAGGCTAAATGCTCTGAA +
Preference number: 6 (lower is better)
Translates to: WSVPSLDGLGEA*REGHMKAKCSE
Trigger: TTCAGAGCATTTAGCCTTCATATGCCCTTCCCTGCATGCTTCCCCCAGGCCGTCAAGACTTGGTACGCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505164.5
CDS GCA 72 bp AGGCAGAACTCAAGTCTTGACGGCCTGGGGGAAGCATaGAGGGAAGGGCATATGAAGGCTAAATGCTCTGAA +
Preference number: 6 (lower is better)
Translates to: RQNSSLDGLGEA*REGHMKAKCSE
Trigger: TTCAGAGCATTTAGCCTTCATATGCCCTTCCCTGCATGCTTCCCCCAGGCCGTCAAGACTTGAGTTCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264221.6
ENST00000514888.5
CDS CCA 72 bp ATGAGGTTAAGTCCGTTACTCCCATTACGCTACTGTTaGGTGCTGGAAAATAACGGAGATTTCCACGTGCAG +
Preference number: 6 (lower is better)
Translates to: MRLSPLLPLRYC*VLENNGDFHVQ
Trigger: CTGCACGTGGAAATCTCCGTTATTTTCCAGCACCCAACAGTAGCGTAATGGGAGTAACGGACTTAACCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264221.6
ENST00000505164.5
ENST00000514888.5
CDS TCA 72 bp TGCAAACAAGTTGTTCATATTAATGCCAACTTCACATaGAAGACATCGACATGCTTACCAGAGAAGGTGAGA +
Preference number: 6 (lower is better)
Translates to: CKQVVHINANFT*KTSTCLPEKVR
Trigger: TCTCACCTTCTCTGGTAAGCATGTCGATGTCTTTCATGTGAAGTTGGCATTAATATGAACAACTTGTTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510584.1