RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PAF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000006712

Ensembl transcript IDs: ENST00000221265.8, ENST00000416728.3, ENST00000595564.5, ENST00000595797.5, ENST00000597365.1, ENST00000598127.1, ENST00000598594.1

Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCATGTCCCGATGTTTGACCACAAGCAGGGCGTTGGTGCCTGACTaGACCCCAGCCTTGGCCCGGCGCTTACTAAGGCGGACCCTAGGC +
Preference number: 1 (lower is better)
Translates to: FMSRCLTTSRALVPD*TPALARRLLRRTLG
Trigger: GCCTAGGGTCCGCCTTAGTAAGCGCCGGGCCAAGGCTGGGGTTCAGTCAGGCACCAACGCCCTGCTTGTGGTCAAACATCGGGACATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
3UTR TCA 90 bp CTCATTCATGTCCCGATGTTTGACCACAAGCAGGGCGTTGGTGCCTaGCTGAACCCCAGCCTTGGCCCGGCGCTTACTAAGGCGGACCCT +
Preference number: 1 (lower is better)
Translates to: LIHVPMFDHKQGVGA*LNPSLGPALTKADP
Trigger: AGGGTCCGCCTTAGTAAGCGCCGGGCCAAGGCTGGGGTTCAGTCAGGCACCAACGCCCTGCTTGTGGTCAAACATCGGGACATGAATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
3UTR TCA 90 bp GTGCCTCCTGAGCTTCCAGTTCCTTCTCATTCATGTCCCGATGTTTaGCCACAAGCAGGGCGTTGGTGCCTGACTGAACCCCAGCCTTGG +
Preference number: 1 (lower is better)
Translates to: VPPELPVPSHSCPDV*PQAGRWCLTEPQPW
Trigger: CCAAGGCTGGGGTTCAGTCAGGCACCAACGCCCTGCTTGTGGTCAAACATCGGGACATGAATGAGAAGGAACTGGAAGCTCAGGAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
3UTR CCA 90 bp CTCTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTaGGGGTTGCGGGAGGTATGTGCTGGGCTGAATGACATCATAGGG +
Preference number: 1 (lower is better)
Translates to: LWPVFLSLKPRSLST*GLREVCAGLNDIIG
Trigger: CCCTATGATGTCATTCAGCCCAGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221265.8
3UTR GCA 90 bp ATTCTGACCTTCGTTGTGCTACATTTTGTGGGAAACCATTGGCCCTaGCTCTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGC +
Preference number: 1 (lower is better)
Translates to: ILTFVVLHFVGNHWP*LWPVFLSLKPRSLS
Trigger: GCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAGAGGCAGGGCCAATGGTTTCCCACAAAATGTAGCACAACGAAGGTCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221265.8
3UTR-3UTR TCA 90 bp CTTCCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGCGTTGGTGCCTGACTaGACCCCAGCCTTGGCCCGG +
Preference number: 2 (lower is better)
Translates to: LPLPPPVRGFLAGPSVPPALVPD*TPALAR
Trigger: CCGGGCCAAGGCTGGGGTTCAGTCAGGCACCAACGC...AGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416728.3
3UTR-3UTR TCA 90 bp CCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGCTTCCAGTTCAGGGCGTTGGTGCCTaGCTGAACCCCAGCCTTGGC +
Preference number: 2 (lower is better)
Translates to: PPVRGFLAGPSVPPELPVQGVGA*LNPSLG
Trigger: GCCAAGGCTGGGGTTCAGTCAGGCACCAACGCCCTG...AACTGGAAGCTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416728.3
3UTR-3UTR CCA 90 bp CCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGCCACAAGCAGGGCGTTaGTGCCTGACTGAACCCCAG +
Preference number: 2 (lower is better)
Translates to: PLPPPVRGFLAGPSVPPEPQAGR*CLTEPQ
Trigger: CTGGGGTTCAGTCAGGCACCAACGCCCTGCTTGTGG...CTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416728.3
3UTR CAA 90 bp CCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTaGCGGGAGGTATGTGCTGGGCTGAATGACATCATAGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: PVFLSLKPRSLSTWG*REVCAGLNDIIGAG
Trigger: CCCAGCCCCTATGATGTCATTCAGCCCAGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221265.8
3UTR-3UTR TCA 90 bp CTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGCACAATAATGGTGTCTaGACCAGCCCTGAATGCCCT +
Preference number: 2 (lower is better)
Translates to: LACVSKPQAKILEHLGVAHNNGV*TSPECP
Trigger: AGGGCATTCAGGGCTGGTTCAGACACCATTATTGTG...CGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
3UTR-3UTR GCA 90 bp CAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGGGAGGTATGTGCTGGGCTGAAAGACCACTAGAAAAGTaGTTTGCTGCTCACAATAAT +
Preference number: 2 (lower is better)
Translates to: QAKILEHLGVAGGMCWAERPLEK*FAAHNN
Trigger: ATTATTGTGAGCAGCAAAGCACTTTTCTAGTGGTCT...TTCAGCCCAGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221265.8
3UTR TCA 72 bp CGATGTTTGACCACAAGCAGGGCGTTGGTGCCTGACTaGACCCCAGCCTTGGCCCGGCGCTTACTAAGGCGG +
Preference number: 3 (lower is better)
Translates to: RCLTTSRALVPD*TPALARRLLRR
Trigger: CCGCCTTAGTAAGCGCCGGGCCAAGGCTGGGGTTCAGTCAGGCACCAACGCCCTGCTTGTGGTCAAACATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
3UTR TCA 72 bp GTCCCGATGTTTGACCACAAGCAGGGCGTTGGTGCCTaGCTGAACCCCAGCCTTGGCCCGGCGCTTACTAAG +
Preference number: 3 (lower is better)
Translates to: VPMFDHKQGVGA*LNPSLGPALTK
Trigger: CTTAGTAAGCGCCGGGCCAAGGCTGGGGTTCAGTCAGGCACCAACGCCCTGCTTGTGGTCAAACATCGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
3UTR-3UTR CAA 90 bp CCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGCTTCCAGTTTTCATGTCCCGATGTTaGACCACAAGCAGGGCGTTG +
Preference number: 3 (lower is better)
Translates to: PPVRGFLAGPSVPPELPVFMSRC*TTSRAL
Trigger: CAACGCCCTGCTTGTGGTCAAACATCGGGACATGAA...AACTGGAAGCTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416728.3
3UTR CCA 72 bp GTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTaGGGGTTGCGGGAGGTATGTGCTGGGCTGAATGAC +
Preference number: 3 (lower is better)
Translates to: VFLSLKPRSLST*GLREVCAGLND
Trigger: GTCATTCAGCCCAGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221265.8
3UTR TCA 72 bp GAGCTTCCAGTTCCTTCTCATTCATGTCCCGATGTTTaGCCACAAGCAGGGCGTTGGTGCCTGACTGAACCC +
Preference number: 3 (lower is better)
Translates to: ELPVPSHSCPDV*PQAGRWCLTEP
Trigger: GGGTTCAGTCAGGCACCAACGCCCTGCTTGTGGTCAAACATCGGGACATGAATGAGAAGGAACTGGAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416728.3
3UTR-3UTR CAA 90 bp CTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGATTAACAGCAAAGGTTaGGGGGTGGGGAACAAACAA +
Preference number: 3 (lower is better)
Translates to: LACVSKPQAKILEHLGVAINSKG*GVGNKQ
Trigger: TTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAAT...CGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR TCA 90 bp CCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGCCAGCGAGACTCAGGTaGACGCGCAGGCAGCACCGG +
Preference number: 4 (lower is better)
Translates to: PLPPPVRGFLAGPSVPPEPARLR*TRRQHR
Trigger: CCGGTGCTGCCTGCGCGTTCACCTGAGTCTCGCTGG...CTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR TCA 90 bp CCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGCAGGGCGTTGGTGCCTaGCTGAACCCCAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PLPPPVRGFLAGPSVPPEQGVGA*LNPSLG
Trigger: GCCAAGGCTGGGGTTCAGTCAGGCACCAACGCCCTG...CTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR GCA 90 bp CCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGCTTCCAGTTGGACGCAGAGGGGCGTaGCGACTTCAGGGGACGCCT +
Preference number: 4 (lower is better)
Translates to: PPVRGFLAGPSVPPELPVGRRGA*RLQGTP
Trigger: AGGCGTCCCCTGAAGTCGGCACGCCCCTCTGCGTCC...AACTGGAAGCTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CCA 90 bp CCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGCTTCCAGTTCGCTGGGCCTGGGTCTaGATGGTGGGCGCCATAGCG +
Preference number: 4 (lower is better)
Translates to: PPVRGFLAGPSVPPELPVRWAWV*MVGAIA
Trigger: CGCTATGGCGCCCACCATCCAGACCCAGGCCCAGCG...AACTGGAAGCTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CCA 90 bp CCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGTGGCCATCCTCCCGCTaGGCCTGGGTCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: PLPPPVRGFLAGPSVPPEWPSSR*AWVWMV
Trigger: CACCATCCAGACCCAGGCCCAGCGGGAGGATGGCCA...CTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR TCA 90 bp CTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGCCAGCGAGACTCAGGTaGACGCGCAGGCAGCACCGG +
Preference number: 4 (lower is better)
Translates to: LACVSKPQAKILEHLGVAPARLR*TRRQHR
Trigger: CCGGTGCTGCCTGCGCGTTCACCTGAGTCTCGCTGG...CGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR TCA 90 bp CTTCCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTCCGCGGAAAGTGGGTTaGGATGAGGTGGGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: LPLPPPVRGFLAGPSVPPPRKVG*DEVGGR
Trigger: TCGCCCGCCCACCTCATCTCAACCCACTTTCCGCGG...AGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR TCA 90 bp CTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGGGAGGTATGTGCTGCGTTGGTGCCTGACTaGACCCCAGCCTTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LSLKPRSLSTWGLREVCAALVPD*TPALAR
Trigger: CCGGGCCAAGGCTGGGGTTCAGTCAGGCACCAACGC...AGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp CCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGGCTCCCCGCGGAAAGTaGGTTGAGATGAGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: PLPPPVRGFLAGPSVPPEAPRGK*VEMRWA
Trigger: CGCCCACCTCATCTCAACCCACTTTCCGCGGGGAGC...CTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CCA 90 bp CTCTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGTCCTCCCGCTGGGCCTaGGTCTGGATGGTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: LWPVFLSLKPRSLSTWGLSSRWA*VWMVGA
Trigger: GGCGCCCACCATCCAGACCCAGGCCCAGCGGGAGGA...CAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp CCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGGAGTCCGGTGGGAATTaGGCCTGTGGCCATCCTCCC +
Preference number: 4 (lower is better)
Translates to: PLPPPVRGFLAGPSVPPEESGGN*ACGHPP
Trigger: GGGAGGATGGCCACAGGCCCAATTCCCACCGGACTC...CTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR TCA 90 bp CTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGCCGCGGAAAGTGGGTTaGGATGAGGTGGGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: LACVSKPQAKILEHLGVAPRKVG*DEVGGR
Trigger: TCGCCCGCCCACCTCATCTCAACCCACTTTCCGCGG...CGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR TCA 90 bp TCTTCCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCACTTCAGGGGACGCCTaGTCCGAGGAAGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSSSSSGSWFSSWAFRASTSGDA*SEEGPA
Trigger: AGCTGGGCCTTCCTCGGATCAGGCGTCCCCTGAAGT...GGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR GCA 90 bp TCCTTGAGCACCTGGGGGTTGCGGGAGGTATGTGCTGGGCTGAATGACATCATAGGACGCAGAGGGGCGTaGCGACTTCAGGGGACGCCT +
Preference number: 4 (lower is better)
Translates to: SLSTWGLREVCAGLNDIIGRRGA*RLQGTP
Trigger: AGGCGTCCCCTGAAGTCGGCACGCCCCTCTGCGTCC...TATGATGTCATTCAGCCCAGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR GCA 90 bp CCAGCCTTGGCCCGGCGCTTACTAAGGCGGACCCTAGGCTGTAATGGTGTAGCCCATCTCCAACGCAGCTaGACCACTCGTGTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PALARRLLRRTLGCNGVAHLQRS*TTRVLG
Trigger: CCCAAGGACACGAGTGGTGCAGCTGCGTTGGAGATG...GGCTACACCATTACAGCCTAGGGTCCGCCTTAGTAAGCGCCGGGCCAAGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR GCA 90 bp TCTGACCTTCGTTGTGCTACATTTTGTGGGAAACCATTGGCCCTGCCTCTGGCCGGAAGGGACTGGCGCTaGGGCTGTGGCTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: SDLRCATFCGKPLALPLAGRDWR*GCGSGS
Trigger: GGAGCCGGAGCCACAGCCGCAGCGCCAGTCCCTTCC...GGCCAGAGGCAGGGCCAATGGTTTCCCACAAAATGTAGCACAACGAAGGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp CCAGCCTTGGCCCGGCGCTTACTAAGGCGGACCCTAGGCTGTAATGGTGTAGCCCACCACTCGTGTCCTTaGGGGCTGGGTCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: PALARRLLRRTLGCNGVAHHSCP*GLGLSQ
Trigger: TTGACTCAGACCCAGCCCCCAAGGACACGAGTGGTG...GGCTACACCATTACAGCCTAGGGTCCGCCTTAGTAAGCGCCGGGCCAAGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR TCA 90 bp CCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGGAAAGTGGGTTGAGATaGGGTGGGCGGGCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PLPPPVRGFLAGPSVPPEESGLR*GGRARR
Trigger: TCTTCTCGCCCGCCCACCTCATCTCAACCCACTTTC...CTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR TCA 90 bp CCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGGGAGGTATGTGCTGGGCTCTTGGGGGCTGGGTCTaGGTCAAAGATCACCTGAGC +
Preference number: 4 (lower is better)
Translates to: PQAKILEHLGVAGGMCWALGGWV*VKDHLS
Trigger: GCTCAGGTGATCTTTGACTCAGACCCAGCCCCCAAG...AGCCCAGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR GCA 90 bp CCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGCTTCCAGTTCAAGCAGGGCGTTGGTaGCTGACTGAACCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PPVRGFLAGPSVPPELPVQAGRW*LTEPQP
Trigger: AGGCTGGGGTTCAGTCAGGCACCAACGCCCTGCTTG...AACTGGAAGCTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR GCA 90 bp CCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGCTTCCAGTTTCCGGTTCCACCAACTaGCGCCAAGACGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: PPVRGFLAGPSVPPELPVSGSTN*RQDAED
Trigger: GTCCTCAGCGTCTTGGCGGCAGTTGGTGGAACCGGA...AACTGGAAGCTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CCA 90 bp CCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGGGGATCTCTTGGAGCTaGTGGGGGCCTGAATCTCCT +
Preference number: 4 (lower is better)
Translates to: PLPPPVRGFLAGPSVPPEGISWS*WGPESP
Trigger: AGGAGATTCAGGCCCCCACCAGCTCCAAGAGATCCC...CTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CCA 90 bp CCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGACCTTCGCGTGCTGCTaGGATCTCTTGGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PLPPPVRGFLAGPSVPPETFACC*DLLELV
Trigger: CACCAGCTCCAAGAGATCCCAGCAGCACGCGAAGGT...CTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CCA 90 bp CCAGCCTTGGCCCGGCGCTTACTAAGGCGGACCCTAGGCTGTAATGGTGTAGCCTCCTCCTCCGGTTCGTaGTTTTCTAGCTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: PALARRLLRRTLGCNGVASSSGS*FSSWAF
Trigger: GAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGA...GGCTACACCATTACAGCCTAGGGTCCGCCTTAGTAAGCGCCGGGCCAAGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR TCA 90 bp CCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGGAGCTGGTGGGGGCCTaGATCTCCTCTTCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: PLPPPVRGFLAGPSVPPEELVGA*ISSSKS
Trigger: ACTTTTGGAAGAGGAGATTCAGGCCCCCACCAGCTC...CTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR TCA 90 bp CTTCCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTCTTGGGGGCTGGGTCTaGGTCAAAGATCACCTGAGC +
Preference number: 4 (lower is better)
Translates to: LPLPPPVRGFLAGPSVPPLGGWV*VKDHLS
Trigger: GCTCAGGTGATCTTTGACTCAGACCCAGCCCCCAAG...AGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR TCA 90 bp CCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGCTTCCAGTTGCCTTCCGTGCCTCCTaGGCTTCCAGTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PPVRGFLAGPSVPPELPVAFRAS*ASSSFS
Trigger: TGAGAAGGAACTGGAAGCTCAGGAGGCACGGAAGGC...AACTGGAAGCTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR TCA 90 bp CTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGTCAAGCCAAGATCCTTaGGCACCTGGGGGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: LACVSKPQAKILEHLGVASSQDP*APGGCG
Trigger: CCCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGA...CGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp AGTGCTTTGCTGCTCACAATAATGGTGTCTGAACCAGCCCTGAATGCCCTGGGACGCTGGGCCTGGGTCTaGATGGTGGGCGCCATAGCG +
Preference number: 4 (lower is better)
Translates to: SALLLTIMVSEPALNALGRWAWV*MVGAIA
Trigger: CGCTATGGCGCCCACCATCCAGACCCAGGCCCAGCG...TCCCAGGGCATTCAGGGCTGGTTCAGACACCATTATTGTGAGCAGCAAAGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp TGCCTCCTGAGCTTCCAGTTCCTTCTCATTCATGTCCCGATGTTTGACCACAAGTCCTCCCGCTGGGCCTaGGTCTGGATGGTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: CLLSFQFLLIHVPMFDHKSSRWA*VWMVGA
Trigger: GGCGCCCACCATCCAGACCCAGGCCCAGCGGGAGGA...CTTGTGGTCAAACATCGGGACATGAATGAGAAGGAACTGGAAGCTCAGGAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CCA 90 bp ACGAATTCTGACCTTCGTTGTGCTACATTTTGTGGGAAACCATTGGCCCTGCCTCTGGCGCTGCGGCTGTaGCTCCGGCTCCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TNSDLRCATFCGKPLALPLALRL*LRLRWP
Trigger: TGGCCAGCGGAGCCGGAGCCACAGCCGCAGCGCCAG...AGGCAGGGCCAATGGTTTCCCACAAAATGTAGCACAACGAAGGTCAGAATTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR TCA 90 bp CCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGGGAGGTATGTGCTGGGCTCCCCTAATCATGGCCTaGGACATCATCTCCAACGCA +
Preference number: 4 (lower is better)
Translates to: PQAKILEHLGVAGGMCWAPLIMA*DIISNA
Trigger: TGCGTTGGAGATGATGTCTCAGGCCATGATTAGGGG...AGCCCAGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR TCA 90 bp CCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGCCCCTAATCATGGCCTaGGACATCATCTCCAACGCA +
Preference number: 4 (lower is better)
Translates to: PLPPPVRGFLAGPSVPPEPLIMA*DIISNA
Trigger: TGCGTTGGAGATGATGTCTCAGGCCATGATTAGGGG...CTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR TCA 90 bp TGCCTCCTGAGCTTCCAGTTCCTTCTCATTCATGTCCCGATGTTTGACCACAAGGCGTTGGTGCCTGACTaGACCCCAGCCTTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: CLLSFQFLLIHVPMFDHKALVPD*TPALAR
Trigger: CCGGGCCAAGGCTGGGGTTCAGTCAGGCACCAACGC...CTTGTGGTCAAACATCGGGACATGAATGAGAAGGAACTGGAAGCTCAGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR TCA 90 bp TCTTCCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTCATGTCCCGATGTTTaGCCACAAGCAGGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: SSSSSSGSWFSSWAFRASSCPDV*PQAGRW
Trigger: CCAACGCCCTGCTTGTGGTCAAACATCGGGACATGA...GGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR TCA 90 bp CTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGGCCTTCCGTGCCTCCTaGGCTTCCAGTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LACVSKPQAKILEHLGVAAFRAS*ASSSFS
Trigger: TGAGAAGGAACTGGAAGCTCAGGAGGCACGGAAGGC...CGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR TCA 90 bp CCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGGGAGGTATGTGCTGGGCTATTGCTGCCGCTGTCTaGATCATTGTCACTGCCACC +
Preference number: 4 (lower is better)
Translates to: PQAKILEHLGVAGGMCWAIAAAV*IIVTAT
Trigger: GGTGGCAGTGACAATGATTCAGACAGCGGCAGCAAT...AGCCCAGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR GCA 90 bp CTCTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCTGCTGCCCTTCTCCTaGTCCTCATCTGAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LWPVFLSLKPRSLSTWGLLLPFS*SSSEPP
Trigger: TGGGGGCTCAGATGAGGAGCAGGAGAAGGGCAGCAG...CAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR GCA 90 bp CTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGGGAGGTATGTGCTCCTCCTTCTCACTGCTaGTGCCCTTCTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSLKPRSLSTWGLREVCAPPSHC*CPSPAP
Trigger: AGGAGCAGGAGAAGGGCAGCAGCAGTGAGAAGGAGG...AGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR GCA 90 bp TCTGACCTTCGTTGTGCTACATTTTGTGGGAAACCATTGGCCCTGCCTCTGGCCGGGCCTCATCCTCGCTaGTCTCGTCCTCACCACTGC +
Preference number: 4 (lower is better)
Translates to: SDLRCATFCGKPLALPLAGPHPR*SRPHHC
Trigger: GCAGTGGTGAGGACGAGAGCAGCGAGGATGAGGCCC...GGCCAGAGGCAGGGCCAATGGTTTCCCACAAAATGTAGCACAACGAAGGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp TCCTTGAGCACCTGGGGGTTGCGGGAGGTATGTGCTGGGCTGAATGACATCATATGGGTTGAGATGAGGTaGGCGGGCGAGAAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLSTWGLREVCAGLNDIIWVEMR*AGEKSS
Trigger: GGAGCTCTTCTCGCCCGCCCACCTCATCTCAACCCA...TATGATGTCATTCAGCCCAGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp TGCCTCCTGAGCTTCCAGTTCCTTCTCATTCATGTCCCGATGTTTGACCACAAGGAGGAAGGCCCAGCTTaGCGCCGCTCCCCGCGGAAA +
Preference number: 4 (lower is better)
Translates to: CLLSFQFLLIHVPMFDHKEEGPA*RRSPRK
Trigger: TTTCCGCGGGGAGCGGCGCCAAGCTGGGCCTTCCTC...CTTGTGGTCAAACATCGGGACATGAATGAGAAGGAACTGGAAGCTCAGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CCA 90 bp CTCTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCCACAAGCAGGGCGTTaGTGCCTGACTGAACCCCAG +
Preference number: 4 (lower is better)
Translates to: LWPVFLSLKPRSLSTWGLPQAGR*CLTEPQ
Trigger: CTGGGGTTCAGTCAGGCACCAACGCCCTGCTTGTGG...CAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221265.8
3UTR CAA 72 bp CTCTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTaGAGCACCTGGGGGTTGCGGGAGGTATGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LWPVFLSLKPRS*STWGLREVCAG
Trigger: CCCAGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR TCA 90 bp CTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGGGCTATTGCAGTACTTaGCTCGGCAGACCACTCCAG +
Preference number: 4 (lower is better)
Translates to: LACVSKPQAKILEHLGVAGYCST*LGRPLQ
Trigger: CTGGAGTGGTCTGCCGAGTCAAGTACTGCAATAGCC...CGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR TCA 90 bp CGGGAGGTATGTGCTGGGCTGAATGACATCATAGGGGCTGGGAGGGGAAGTAAATGTCTGAACCAGCCCTaGATGCCCTGGGACTCAGTC +
Preference number: 4 (lower is better)
Translates to: REVCAGLNDIIGAGRGSKCLNQP*MPWDSV
Trigger: GACTGAGTCCCAGGGCATTCAGGGCTGGTTCAGACA...TTTACTTCCCCTCCCAGCCCCTATGATGTCATTCAGCCCAGCACATACCTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR GCA 90 bp CCAGCCTTGGCCCGGCGCTTACTAAGGCGGACCCTAGGCTGTAATGGTGTAGCCTCCTCGGTAAACTGCTaGTTCACAGAAACCCCAATC +
Preference number: 4 (lower is better)
Translates to: PALARRLLRRTLGCNGVASSVNC*FTETPI
Trigger: GATTGGGGTTTCTGTGAAGCAGCAGTTTACCGAGGA...GGCTACACCATTACAGCCTAGGGTCCGCCTTAGTAAGCGCCGGGCCAAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR GCA 90 bp TCCTTGAGCACCTGGGGGTTGCGGGAGGTATGTGCTGGGCTGAATGACATCATACCCGTTCACTCTCGCTaGCCGAGTGCTCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: SLSTWGLREVCAGLNDIIPVHSR*PSAHLH
Trigger: GTGAAGATGAGCACTCGGGCAGCGAGAGTGAACGGG...TATGATGTCATTCAGCCCAGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp TGCCTCCTGAGCTTCCAGTTCCTTCTCATTCATGTCCCGATGTTTGACCACAAGTGGGAATTGGGCCTGTaGCCATCCTCCCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: CLLSFQFLLIHVPMFDHKWELGL*PSSRWA
Trigger: GGCCCAGCGGGAGGATGGCCACAGGCCCAATTCCCA...CTTGTGGTCAAACATCGGGACATGAATGAGAAGGAACTGGAAGCTCAGGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CCA 90 bp TCTGACCTTCGTTGTGCTACATTTTGTGGGAAACCATTGGCCCTGCCTCTGGCCGGTGACCCCCAGGTCTaGCTCAGTCAGGAGGTCATG +
Preference number: 4 (lower is better)
Translates to: SDLRCATFCGKPLALPLAGDPQV*LSQEVM
Trigger: CATGACCTCCTGACTGAGCCAGACCTGGGGGTCACC...GGCCAGAGGCAGGGCCAATGGTTTCCCACAAAATGTAGCACAACGAAGGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp CCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGCTTCCAGTTATCTCTTGGAGCTGGTaGGGGCCTGAATCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: PPVRGFLAGPSVPPELPVISWSW*GPESPL
Trigger: AAGAGGAGATTCAGGCCCCCACCAGCTCCAAGAGAT...AACTGGAAGCTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CCA 90 bp CTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGGGAGGTATGTGCTTGTCTTTCGCATCCATaGCACCACCTTCGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: LSLKPRSLSTWGLREVCACLSHP*HHLRVL
Trigger: CAGCACGCGAAGGTGGTGCCATGGATGCGAAAGACA...AGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR GCA 90 bp CCAGCCTTGGCCCGGCGCTTACTAAGGCGGACCCTAGGCTGTAATGGTGTAGCCATACACATCATCTGGTaGATAGTCCATCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PALARRLLRRTLGCNGVAIHIIW*IVHLLL
Trigger: GAGGAGGAGATGGACTATGCACCAGATGATGTGTAT...GGCTACACCATTACAGCCTAGGGTCCGCCTTAGTAAGCGCCGGGCCAAGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR GCA 90 bp AGTGCTTTGCTGCTCACAATAATGGTGTCTGAACCAGCCCTGAATGCCCTGGGACTCTCGCTGCCCGAGTaGTCATCTTCACTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SALLLTIMVSEPALNALGLSLPE*SSSLPS
Trigger: GGAGGGCAGTGAAGATGAGCACTCGGGCAGCGAGAG...TCCCAGGGCATTCAGGGCTGGTTCAGACACCATTATTGTGAGCAGCAAAGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR GCA 90 bp CTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGGGAGGTATGTGCTCTGAATCATTGTCACTaGCACCTTGGGCCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: LSLKPRSLSTWGLREVCALNHCH*HLGPVL
Trigger: GAGGACAGGCCCAAGGTGGCAGTGACAATGATTCAG...AGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR GCA 90 bp CTCTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGGGCCACCCCCATTGCTaGCGCTGTCTGAATCATTGT +
Preference number: 4 (lower is better)
Translates to: LWPVFLSLKPRSLSTWGLGHPHC*RCLNHC
Trigger: ACAATGATTCAGACAGCGGCAGCAATGGGGGTGGCC...CAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp CTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGATCTCTTGGAGCTGGTaGGGGCCTGAATCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LACVSKPQAKILEHLGVAISWSW*GPESPL
Trigger: AAGAGGAGATTCAGGCCCCCACCAGCTCCAAGAGAT...CGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp TCCTTGAGCACCTGGGGGTTGCGGGAGGTATGTGCTGGGCTGAATGACATCATATCCTCCTCCGGTTCGTaGTTTTCTAGCTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SLSTWGLREVCAGLNDIISSSGS*FSSWAF
Trigger: GAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGA...TATGATGTCATTCAGCCCAGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp CGGGAGGTATGTGCTGGGCTGAATGACATCATAGGGGCTGGGAGGGGAAGTAAATGCCACTCTTGTCACTaGCCTCGTCCCTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: REVCAGLNDIIGAGRGSKCHSCH*PRPCHL
Trigger: AAGGTGACAGGGACGAGGCCAGTGACAAGAGTGGCA...TTTACTTCCCCTCCCAGCCCCTATGATGTCATTCAGCCCAGCACATACCTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp CTCTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGTTGTCACTGCCACCTTaGGCCTGTCCTCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LWPVFLSLKPRSLSTWGLLSLPP*ACPLSS
Trigger: TGAGGACAGAGGACAGGCCCAAGGTGGCAGTGACAA...CAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR TCA 90 bp CCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGCTTCCAGTTTCTTCTCAATGGCTGTaGTCTGGCTATCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: PPVRGFLAGPSVPPELPVSSQWL*SGYPCL
Trigger: AAGACAGGGATAGCCAGATCACAGCCATTGAGAAGA...AACTGGAAGCTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR GCA 90 bp TGCCTCCTGAGCTTCCAGTTCCTTCTCATTCATGTCCCGATGTTTGACCACAAGGGCACCACCTTCGCGTaGTGCTGGGATCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: CLLSFQFLLIHVPMFDHKGTTFA*CWDLLE
Trigger: CTCCAAGAGATCCCAGCAGCACGCGAAGGTGGTGCC...CTTGTGGTCAAACATCGGGACATGAATGAGAAGGAACTGGAAGCTCAGGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR GCA 90 bp TCTTCCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTCTTCCTCGGTAAACTaGTGCTTCACAGAAACCCCA +
Preference number: 4 (lower is better)
Translates to: SSSSSSGSWFSSWAFRASSSSVN*CFTETP
Trigger: TGGGGTTTCTGTGAAGCAGCAGTTTACCGAGGAAGA...GGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR GCA 90 bp CTCTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGAGTGCTCATCTTCACTaGCCTCCTTCTCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: LWPVFLSLKPRSLSTWGLSAHLH*PPSHCC
Trigger: GCAGCAGTGAGAAGGAGGGCAGTGAAGATGAGCACT...CAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR GCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGGGAAGGGACTGGCGCTaGGGCTGTGGCTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVGRDWR*GCGSGS
Trigger: GGAGCCGGAGCCACAGCCGCAGCGCCAGTCCCTTCC...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR GCA 90 bp CGGGAGGTATGTGCTGGGCTGAATGACATCATAGGGGCTGGGAGGGGAAGTAAAGGAAACCATTGGCCCTaGCTCTGGCCTGTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: REVCAGLNDIIGAGRGSKGNHWP*LWPVFL
Trigger: TAGAAACACAGGCCAGAGGCAGGGCCAATGGTTTCC...TTTACTTCCCCTCCCAGCCCCTATGATGTCATTCAGCCCAGCACATACCTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp TGCCTCCTGAGCTTCCAGTTCCTTCTCATTCATGTCCCGATGTTTGACCACAAGTGGGTTGAGATGAGGTaGGCGGGCGAGAAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: CLLSFQFLLIHVPMFDHKWVEMR*AGEKSS
Trigger: GGAGCTCTTCTCGCCCGCCCACCTCATCTCAACCCA...CTTGTGGTCAAACATCGGGACATGAATGAGAAGGAACTGGAAGCTCAGGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CCA 90 bp ACGAATTCTGACCTTCGTTGTGCTACATTTTGTGGGAAACCATTGGCCCTGCCTGAGTCCGGTGGGAATTaGGCCTGTGGCCATCCTCCC +
Preference number: 4 (lower is better)
Translates to: TNSDLRCATFCGKPLALPESGGN*ACGHPP
Trigger: GGGAGGATGGCCACAGGCCCAATTCCCACCGGACTC...AGGCAGGGCCAATGGTTTCCCACAAAATGTAGCACAACGAAGGTCAGAATTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp TGCCTCCTGAGCTTCCAGTTCCTTCTCATTCATGTCCCGATGTTTGACCACAAGGCTGCTGGGATCTCTTaGAGCTGGTGGGGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: CLLSFQFLLIHVPMFDHKAAGIS*SWWGPE
Trigger: TTCAGGCCCCCACCAGCTCCAAGAGATCCCAGCAGC...CTTGTGGTCAAACATCGGGACATGAATGAGAAGGAACTGGAAGCTCAGGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CCA 90 bp CTTCCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTCCACATCTTAAAGTCTaGGAAGACAGGCATGACCTC +
Preference number: 4 (lower is better)
Translates to: LPLPPPVRGFLAGPSVPPPHLKV*EDRHDL
Trigger: GAGGTCATGCCTGTCTTCCCAGACTTTAAGATGTGG...AGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CCA 90 bp TGCCTCCTGAGCTTCCAGTTCCTTCTCATTCATGTCCCGATGTTTGACCACAAGCCACAAGCAGGGCGTTaGTGCCTGACTGAACCCCAG +
Preference number: 4 (lower is better)
Translates to: CLLSFQFLLIHVPMFDHKPQAGR*CLTEPQ
Trigger: CTGGGGTTCAGTCAGGCACCAACGCCCTGCTTGTGG...CTTGTGGTCAAACATCGGGACATGAATGAGAAGGAACTGGAAGCTCAGGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGCTGGCGCTGCGGCTGTaGCTCCGGCTCCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKLALRL*LRLRWP
Trigger: TGGCCAGCGGAGCCGGAGCCACAGCCGCAGCGCCAG...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
3UTR CAA 72 bp CTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTaGCGGGAGGTATGTGCTGGGCTGAATGACATCATA +
Preference number: 4 (lower is better)
Translates to: LSLKPRSLSTWG*REVCAGLNDII
Trigger: TATGATGTCATTCAGCCCAGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR TCA 90 bp AGTGCTTTGCTGCTCACAATAATGGTGTCTGAACCAGCCCTGAATGCCCTGGGAGAGCTGGTGGGGGCCTaGATCTCCTCTTCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: SALLLTIMVSEPALNALGELVGA*ISSSKS
Trigger: ACTTTTGGAAGAGGAGATTCAGGCCCCCACCAGCTC...TCCCAGGGCATTCAGGGCTGGTTCAGACACCATTATTGTGAGCAGCAAAGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR TCA 90 bp TCTTCCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCAGATGCCATAACGGTTaGACTCAGTGGAGATGTACT +
Preference number: 4 (lower is better)
Translates to: SSSSSSGSWFSSWAFRASRCHNG*TQWRCT
Trigger: AGTACATCTCCACTGAGTTCAACCGTTATGGCATCT...GGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR TCA 90 bp CTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGGGAGGTATGTGCTGAGTCAAAGATCACCTaGGCACATGGATTGATCCAC +
Preference number: 4 (lower is better)
Translates to: LSLKPRSLSTWGLREVCAESKIT*AHGLIH
Trigger: GTGGATCAATCCATGTGCTCAGGTGATCTTTGACTC...AGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR TCA 90 bp CCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGCTTCCAGTTCACCCTCTCGGAAGATaGAGAAGTAGTTTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PPVRGFLAGPSVPPELPVHPLGR*RSSFPH
Trigger: ATGAGGAAAACTACTTCTTCATCTTCCGAGAGGGTG...AACTGGAAGCTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR TCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGGCGTTGGTGCCTGACTaGACCCCAGCCTTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVALVPD*TPALAR
Trigger: CCGGGCCAAGGCTGGGGTTCAGTCAGGCACCAACGC...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR GCA 90 bp TGCCTCCTGAGCTTCCAGTTCCTTCTCATTCATGTCCCGATGTTTGACCACAAGACCACCTTCGCGTGCTaGTGGGATCTCTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: CLLSFQFLLIHVPMFDHKTTFAC*WDLLEL
Trigger: CAGCTCCAAGAGATCCCAGCAGCACGCGAAGGTGGT...CTTGTGGTCAAACATCGGGACATGAATGAGAAGGAACTGGAAGCTCAGGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR GCA 90 bp ACGAATTCTGACCTTCGTTGTGCTACATTTTGTGGGAAACCATTGGCCCTGCCTCAAGCAGGGCGTTGGTaGCTGACTGAACCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TNSDLRCATFCGKPLALPQAGRW*LTEPQP
Trigger: AGGCTGGGGTTCAGTCAGGCACCAACGCCCTGCTTG...AGGCAGGGCCAATGGTTTCCCACAAAATGTAGCACAACGAAGGTCAGAATTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR GCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGGGGCCGAGTGCTCGCTaGCACTGGGGAAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVGPSAR*HWGRDW
Trigger: CCAGTCCCTTCCCCAGTGGCAGCGAGCACTCGGCCC...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AAACGAATTCTGACCTTCGTTGTGCTACATTTTGTGGGAAACCATTGGCCCTGCGCTCCCCGCGGAAAGTaGGTTGAGATGAGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: KRILTFVVLHFVGNHWPCAPRGK*VEMRWA
Trigger: CGCCCACCTCATCTCAACCCACTTTCCGCGGGGAGC...GCAGGGCCAATGGTTTCCCACAAAATGTAGCACAACGAAGGTCAGAATTCGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGGAGGAAGGCCCAGCTTaGCGCCGCTCCCCGCGGAAA +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVEEGPA*RRSPRK
Trigger: TTTCCGCGGGGAGCGGCGCCAAGCTGGGCCTTCCTC...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGCGCTGGGCCTGGGTCTaGATGGTGGGCGCCATAGCG +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVRWAWV*MVGAIA
Trigger: CGCTATGGCGCCCACCATCCAGACCCAGGCCCAGCG...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTCCTCCCGCTGGGCCTaGGTCTGGATGGTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKSSRWA*VWMVGA
Trigger: GGCGCCCACCATCCAGACCCAGGCCCAGCGGGAGGA...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp CGGGAGGTATGTGCTGGGCTGAATGACATCATAGGGGCTGGGAGGGGAAGTAAAGAAGTGGCTTTGTACTaGACGAACCTGTTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: REVCAGLNDIIGAGRGSKEVALY*TNLFWS
Trigger: CGACCAGAACAGGTTCGTCCAGTACAAAGCCACTTC...TTTACTTCCCCTCCCAGCCCCTATGATGTCATTCAGCCCAGCACATACCTCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp CTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGCCACATCTTAAAGTCTaGGAAGACAGGCATGACCTC +
Preference number: 4 (lower is better)
Translates to: LACVSKPQAKILEHLGVAPHLKV*EDRHDL
Trigger: GAGGTCATGCCTGTCTTCCCAGACTTTAAGATGTGG...CGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp CCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGAGCTTCCAGTTGTCATACACATCATCTaGTGCATAGTCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: PPVRGFLAGPSVPPELPVVIHII*CIVHLL
Trigger: GAGGAGATGGACTATGCACCAGATGATGTGTATGAC...AACTGGAAGCTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CCA 90 bp AGTGCTTTGCTGCTCACAATAATGGTGTCTGAACCAGCCCTGAATGCCCTGGGATTTGTGGGAAACCATTaGCCCTGCCTCTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SALLLTIMVSEPALNALGFVGNH*PCLWPV
Trigger: CACAGGCCAGAGGCAGGGCCAATGGTTTCCCACAAA...TCCCAGGGCATTCAGGGCTGGTTCAGACACCATTATTGTGAGCAGCAAAGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR TCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGCCAGCGAGACTCAGGTaGACGCGCAGGCAGCACCGG +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKPARLR*TRRQHR
Trigger: CCGGTGCTGCCTGCGCGTTCACCTGAGTCTCGCTGG...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR TCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGCCGCGGAAAGTGGGTTaGGATGAGGTGGGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVPRKVG*DEVGGR
Trigger: TCGCCCGCCCACCTCATCTCAACCCACTTTCCGCGG...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR TCA 90 bp TGCCTCCTGAGCTTCCAGTTCCTTCTCATTCATGTCCCGATGTTTGACCACAAGGGCTATTGCAGTACTTaGCTCGGCAGACCACTCCAG +
Preference number: 4 (lower is better)
Translates to: CLLSFQFLLIHVPMFDHKGYCST*LGRPLQ
Trigger: CTGGAGTGGTCTGCCGAGTCAAGTACTGCAATAGCC...CTTGTGGTCAAACATCGGGACATGAATGAGAAGGAACTGGAAGCTCAGGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR TCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGCAGGGCGTTGGTGCCTaGCTGAACCCCAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVQGVGA*LNPSLG
Trigger: GCCAAGGCTGGGGTTCAGTCAGGCACCAACGCCCTG...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR GCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGGGACGCAGAGGGGCGTaGCGACTTCAGGGGACGCCT +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKGRRGA*RLQGTP
Trigger: AGGCGTCCCCTGAAGTCGGCACGCCCCTCTGCGTCC...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR GCA 90 bp CTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGGGAGGTATGTGCTATACACATCATCTGGTaGATAGTCCATCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LSLKPRSLSTWGLREVCAIHIIW*IVHLLL
Trigger: GAGGAGGAGATGGACTATGCACCAGATGATGTGTAT...AGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR GCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGGGGCCGAGTGCTCGCTaGCACTGGGGAAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKGPSAR*HWGRDW
Trigger: CCAGTCCCTTCCCCAGTGGCAGCGAGCACTCGGCCC...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGGAGGAAGGCCCAGCTTaGCGCCGCTCCCCGCGGAAA +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKEEGPA*RRSPRK
Trigger: TTTCCGCGGGGAGCGGCGCCAAGCTGGGCCTTCCTC...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp CTCTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGGATCTAGAAGAACATTaGGGTCGATGCGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: LWPVFLSLKPRSLSTWGLDLEEH*GRCGRC
Trigger: ACACCTACCGCATCGACCCCAATGTTCTTCTAGATC...CAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp AAACGAATTCTGACCTTCGTTGTGCTACATTTTGTGGGAAACCATTGGCCCTGCGCTGCTGGGATCTCTTaGAGCTGGTGGGGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: KRILTFVVLHFVGNHWPCAAGIS*SWWGPE
Trigger: TTCAGGCCCCCACCAGCTCCAAGAGATCCCAGCAGC...GCAGGGCCAATGGTTTCCCACAAAATGTAGCACAACGAAGGTCAGAATTCGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp TGCCTCCTGAGCTTCCAGTTCCTTCTCATTCATGTCCCGATGTTTGACCACAAGTGTCTTTCGCATCCATaGCACCACCTTCGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: CLLSFQFLLIHVPMFDHKCLSHP*HHLRVL
Trigger: CAGCACGCGAAGGTGGTGCCATGGATGCGAAAGACA...CTTGTGGTCAAACATCGGGACATGAATGAGAAGGAACTGGAAGCTCAGGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CCA 90 bp TCTTCCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTCAATGGCTGTGATCTaGCTATCCCTGTCTTTGTAT +
Preference number: 4 (lower is better)
Translates to: SSSSSSGSWFSSWAFRASSMAVI*LSLSLY
Trigger: ATACAAAGACAGGGATAGCCAGATCACAGCCATTGA...GGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CCA 90 bp ACGAATTCTGACCTTCGTTGTGCTACATTTTGTGGGAAACCATTGGCCCTGCCTCACCACTCGTGTCCTTaGGGGCTGGGTCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: TNSDLRCATFCGKPLALPHHSCP*GLGLSQ
Trigger: TTGACTCAGACCCAGCCCCCAAGGACACGAGTGGTG...AGGCAGGGCCAATGGTTTCCCACAAAATGTAGCACAACGAAGGTCAGAATTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGAGTGCTCGCTGCCACTaGGGAAGGGACTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVSARCH*GRDWRC
Trigger: GCAGCGCCAGTCCCTTCCCCAGTGGCAGCGAGCACT...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGACCACTCCAGACCTGTaGCCATCCTCCCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVTTPDL*PSSRWA
Trigger: GGCCCAGCGGGAGGATGGCCACAGGTCTGGAGTGGT...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595564.5
CDS-3UTR TCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGACTTCAGGGGACGCCTaGTCCGAGGAAGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVTSGDA*SEEGPA
Trigger: AGCTGGGCCTTCCTCGGATCAGGCGTCCCCTGAAGT...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR TCA 90 bp TCTGACCTTCGTTGTGCTACATTTTGTGGGAAACCATTGGCCCTGCCTCTGGCCTCTTCTCAATGGCTGTaGTCTGGCTATCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: SDLRCATFCGKPLALPLASSQWL*SGYPCL
Trigger: AAGACAGGGATAGCCAGATCACAGCCATTGAGAAGA...GGCCAGAGGCAGGGCCAATGGTTTCCCACAAAATGTAGCACAACGAAGGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR TCA 90 bp CGGGAGGTATGTGCTGGGCTGAATGACATCATAGGGGCTGGGAGGGGAAGTAAACACCCTCTCGGAAGATaGAGAAGTAGTTTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: REVCAGLNDIIGAGRGSKHPLGR*RSSFPH
Trigger: ATGAGGAAAACTACTTCTTCATCTTCCGAGAGGGTG...TTTACTTCCCCTCCCAGCCCCTATGATGTCATTCAGCCCAGCACATACCTCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR TCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGCAGGGCGTTGGTGCCTaGCTGAACCCCAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKQGVGA*LNPSLG
Trigger: GCCAAGGCTGGGGTTCAGTCAGGCACCAACGCCCTG...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR TCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGCTGCCGCCAAGACGCTaGGGACCCAACGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKLPPRR*GPNGSP
Trigger: AGGAGACCCGTTGGGTCCTCAGCGTCTTGGCGGCAG...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595564.5
CDS-3UTR GCA 90 bp TCCTTGAGCACCTGGGGGTTGCGGGAGGTATGTGCTGGGCTGAATGACATCATAAGGAGGTCATGTTTGTaGTGTTTCTCCAAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: SLSTWGLREVCAGLNDIIRRSCL*CFSKEV
Trigger: CACTTCCTTGGAGAAACAGCACAAACATGACCTCCT...TATGATGTCATTCAGCCCAGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGGCCATCCTCCCGCTaGGCCTGGGTCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKWPSSR*AWVWMV
Trigger: CACCATCCAGACCCAGGCCCAGCGGGAGGATGGCCA...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGGGAATTGGGCCTGTaGCCATCCTCCCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKWELGL*PSSRWA
Trigger: GGCCCAGCGGGAGGATGGCCACAGGCCCAATTCCCA...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp AAACGAATTCTGACCTTCGTTGTGCTACATTTTGTGGGAAACCATTGGCCCTGCACCTTCGCGTGCTGCTaGGATCTCTTGGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: KRILTFVVLHFVGNHWPCTFACC*DLLELV
Trigger: CACCAGCTCCAAGAGATCCCAGCAGCACGCGAAGGT...GCAGGGCCAATGGTTTCCCACAAAATGTAGCACAACGAAGGTCAGAATTCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp CTTCCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGATCACCTGAGCACATaGATTGATCCACATCTTAAA +
Preference number: 4 (lower is better)
Translates to: LPLPPPVRGFLAGPSVPPDHLST*IDPHLK
Trigger: TTTAAGATGTGGATCAATCCATGTGCTCAGGTGATC...AGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGAGTGCTCGCTGCCACTaGGGAAGGGACTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKSARCH*GRDWRC
Trigger: GCAGCGCCAGTCCCTTCCCCAGTGGCAGCGAGCACT...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGTCACTGCCATCCTCCTaGGCCGAGTGCTCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVSLPSS*AECSLP
Trigger: TGGCAGCGAGCACTCGGCCCAGGAGGATGGCAGTGA...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR TCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGACTTCAGGGGACGCCTaGTCCGAGGAAGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKTSGDA*SEEGPA
Trigger: AGCTGGGCCTTCCTCGGATCAGGCGTCCCCTGAAGT...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR TCA 90 bp TCTGACCTTCGTTGTGCTACATTTTGTGGGAAACCATTGGCCCTGCCTCTGGCCAGATGCCATAACGGTTaGACTCAGTGGAGATGTACT +
Preference number: 4 (lower is better)
Translates to: SDLRCATFCGKPLALPLARCHNG*TQWRCT
Trigger: AGTACATCTCCACTGAGTTCAACCGTTATGGCATCT...GGCCAGAGGCAGGGCCAATGGTTTCCCACAAAATGTAGCACAACGAAGGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR GCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGGGCACCACCTTCGCGTaGTGCTGGGATCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVGTTFA*CWDLLE
Trigger: CTCCAAGAGATCCCAGCAGCACGCGAAGGTGGTGCC...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR GCA 90 bp AGTGCTTTGCTGCTCACAATAATGGTGTCTGAACCAGCCCTGAATGCCCTGGGATCCTCGGTAAACTGCTaGTTCACAGAAACCCCAATC +
Preference number: 4 (lower is better)
Translates to: SALLLTIMVSEPALNALGSSVNC*FTETPI
Trigger: GATTGGGGTTTCTGTGAAGCAGCAGTTTACCGAGGA...TCCCAGGGCATTCAGGGCTGGTTCAGACACCATTATTGTGAGCAGCAAAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR GCA 90 bp AGTGCTTTGCTGCTCACAATAATGGTGTCTGAACCAGCCCTGAATGCCCTGGGATCTTCCTCGGTAAACTaGTGCTTCACAGAAACCCCA +
Preference number: 4 (lower is better)
Translates to: SALLLTIMVSEPALNALGSSSVN*CFTETP
Trigger: TGGGGTTTCTGTGAAGCAGCAGTTTACCGAGGAAGA...TCCCAGGGCATTCAGGGCTGGTTCAGACACCATTATTGTGAGCAGCAAAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR GCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGCAAGCAGGGCGTTGGTaGCTGACTGAACCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVQAGRW*LTEPQP
Trigger: AGGCTGGGGTTCAGTCAGGCACCAACGCCCTGCTTG...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AGTAAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACTCACTGCCATCCTCCTaGGCCGAGTGCTCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SKEKLTLLTAKVWGWGTNSLPSS*AECSLP
Trigger: TGGCAGCGAGCACTCGGCCCAGGAGGATGGCAGTGA...GTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp TCTGACCTTCGTTGTGCTACATTTTGTGGGAAACCATTGGCCCTGCCTCTGGCCCACTATCAGCTTCACTaGAATCAGAAGCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SDLRCATFCGKPLALPLAHYQLH*NQKLQL
Trigger: AAGCTGCAGCTTCTGATTCCAGTGAAGCTGATAGTG...GGCCAGAGGCAGGGCCAATGGTTTCCCACAAAATGTAGCACAACGAAGGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp CTTCCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTGACTGTACTGAATACTaGTTTCCAACTCATTGTAGT +
Preference number: 4 (lower is better)
Translates to: LPLPPPVRGFLAGPSVPPDCTEY*FPTHCS
Trigger: ACTACAATGAGTTGGAAACCAGTATTCAGTACAGTC...AGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR TCA 90 bp TGCCTCCTGAGCTTCCAGTTCCTTCTCATTCATGTCCCGATGTTTGACCACAAGGAGTCAAAGATCACCTaGGCACATGGATTGATCCAC +
Preference number: 4 (lower is better)
Translates to: CLLSFQFLLIHVPMFDHKESKIT*AHGLIH
Trigger: GTGGATCAATCCATGTGCTCAGGTGATCTTTGACTC...CTTGTGGTCAAACATCGGGACATGAATGAGAAGGAACTGGAAGCTCAGGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR GCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGACCACCTTCGCGTGCTaGTGGGATCTCTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVTTFAC*WDLLEL
Trigger: CAGCTCCAAGAGATCCCAGCAGCACGCGAAGGTGGT...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR GCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTCCGGTTCCACCAACTaGCGCCAAGACGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKSGSTN*RQDAED
Trigger: GTCCTCAGCGTCTTGGCGGCAGTTGGTGGAACCGGA...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595564.5
CDS-3UTR CCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGGGTTGAGATGAGGTaGGCGGGCGAGAAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKWVEMR*AGEKSS
Trigger: GGAGCTCTTCTCGCCCGCCCACCTCATCTCAACCCA...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGGGTGACCCCCAGGTCTaGCTCAGTCAGGAGGTCATG +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKGDPQV*LSQEVM
Trigger: CATGACCTCCTGACTGAGCCAGACCTGGGGGTCACC...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGGGGATCTCTTGGAGCTaGTGGGGGCCTGAATCTCCT +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVGISWS*WGPESP
Trigger: AGGAGATTCAGGCCCCCACCAGCTCCAAGAGATCCC...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGGCTGCTGGGATCTCTTaGAGCTGGTGGGGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKAAGIS*SWWGPE
Trigger: TTCAGGCCCCCACCAGCTCCAAGAGATCCCAGCAGC...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGACCTTCGCGTGCTGCTaGGATCTCTTGGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVTFACC*DLLELV
Trigger: CACCAGCTCCAAGAGATCCCAGCAGCACGCGAAGGT...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp CTCTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGGATCACCTGAGCACATaGATTGATCCACATCTTAAA +
Preference number: 4 (lower is better)
Translates to: LWPVFLSLKPRSLSTWGLDHLST*IDPHLK
Trigger: TTTAAGATGTGGATCAATCCATGTGCTCAGGTGATC...CAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGCACCACTCGTGTCCTTaGGGGCTGGGTCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVHHSCP*GLGLSQ
Trigger: TTGACTCAGACCCAGCCCCCAAGGACACGAGTGGTG...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGCCACAAGCAGGGCGTTaGTGCCTGACTGAACCCCAG +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKPQAGR*CLTEPQ
Trigger: CTGGGGTTCAGTCAGGCACCAACGCCCTGCTTGTGG...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AGTGCTTTGCTGCTCACAATAATGGTGTCTGAACCAGCCCTGAATGCCCTGGGATTAACAGCAAAGGTTTaGGGGTGGGGAACAAACAAG +
Preference number: 4 (lower is better)
Translates to: SALLLTIMVSEPALNALGLTAKV*GWGTNK
Trigger: CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAA...TCCCAGGGCATTCAGGGCTGGTTCAGACACCATTATTGTGAGCAGCAAAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR TCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGGAAAGTGGGTTGAGATaGGGTGGGCGGGCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKESGLR*GGRARR
Trigger: TCTTCTCGCCCGCCCACCTCATCTCAACCCACTTTC...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR TCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGGGCTATTGCAGTACTTaGCTCGGCAGACCACTCCAG +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVGYCST*LGRPLQ
Trigger: CTGGAGTGGTCTGCCGAGTCAAGTACTGCAATAGCC...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR TCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGCTTGGGGGCTGGGTCTaGGTCAAAGATCACCTGAGC +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKLGGWV*VKDHLS
Trigger: GCTCAGGTGATCTTTGACTCAGACCCAGCCCCCAAG...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR TCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGGCCTTCCGTGCCTCCTaGGCTTCCAGTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKAFRAS*ASSSFS
Trigger: TGAGAAGGAACTGGAAGCTCAGGAGGCACGGAAGGC...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR TCA 90 bp AGTAAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACCTCCTGCTCCTCATCTaGGCCCCCAGCTTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SKEKLTLLTAKVWGWGTNLLLLI*APSFFL
Trigger: GAGAAAGAAGCTGGGGGCTCAGATGAGGAGCAGGAG...GTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR TCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGTCTGAACCAGCCCTaGATGCCCTGGGACTCAGTC +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKCLNQP*MPWDSV
Trigger: GACTGAGTCCCAGGGCATTCAGGGCTGGTTCAGACA...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR GCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGCATCTCCAACGCAGCTaGACCACTCGTGTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKHLQRS*TTRVLG
Trigger: CCCAAGGACACGAGTGGTGCAGCTGCGTTGGAGATG...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR GCA 90 bp AGTAAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACGCTGGCCACCCCCATTaGTGCCGCTGTCTGAATCAT +
Preference number: 4 (lower is better)
Translates to: SKEKLTLLTAKVWGWGTNAGHPH*CRCLNH
Trigger: ATGATTCAGACAGCGGCAGCAATGGGGGTGGCCAGC...GTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR GCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGGCTGGCCACCCCCATTaGTGCCGCTGTCTGAATCAT +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKAGHPH*CRCLNH
Trigger: ATGATTCAGACAGCGGCAGCAATGGGGGTGGCCAGC...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGTGTCTTTCGCATCCATaGCACCACCTTCGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVCLSHP*HHLRVL
Trigger: CAGCACGCGAAGGTGGTGCCATGGATGCGAAAGACA...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGTCCTCCTCCGGTTCGTaGTTTTCTAGCTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVSSSGS*FSSWAF
Trigger: GAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGA...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGTTGTCACTGCCACCTTaGGCCTGTCCTCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVLSLPP*ACPLSS
Trigger: TGAGGACAGAGGACAGGCCCAAGGTGGCAGTGACAA...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR TCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGGAGCTGGTGGGGGCCTaGATCTCCTCTTCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKELVGA*ISSSKS
Trigger: ACTTTTGGAAGAGGAGATTCAGGCCCCCACCAGCTC...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR TCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGCCCCTAATCATGGCCTaGGACATCATCTCCAACGCA +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVPLIMA*DIISNA
Trigger: TGCGTTGGAGATGATGTCTCAGGCCATGATTAGGGG...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR TCA 90 bp AGTAAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACTCATGTCCCGATGTTTaGCCACAAGCAGGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: SKEKLTLLTAKVWGWGTNSCPDV*PQAGRW
Trigger: CCAACGCCCTGCTTGTGGTCAAACATCGGGACATGA...GTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR TCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTCATGTCCCGATGTTTaGCCACAAGCAGGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKSCPDV*PQAGRW
Trigger: CCAACGCCCTGCTTGTGGTCAAACATCGGGACATGA...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR TCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGATTGCTGCCGCTGTCTaGATCATTGTCACTGCCACC +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVIAAAV*IIVTAT
Trigger: GGTGGCAGTGACAATGATTCAGACAGCGGCAGCAAT...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR GCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTCTCGTCCTCACCACTaGCACTCTTGTCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKSRPHH*HSCHWP
Trigger: AGGCCAGTGACAAGAGTGGCAGTGGTGAGGACGAGA...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR GCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGCTGAATCATTGTCACTaGCACCTTGGGCCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVLNHCH*HLGPVL
Trigger: GAGGACAGGCCCAAGGTGGCAGTGACAATGATTCAG...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR GCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGGGCCACCCCCATTGCTaGCGCTGTCTGAATCATTGT +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKGHPHC*RCLNHC
Trigger: ACAATGATTCAGACAGCGGCAGCAATGGGGGTGGCC...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AGTGCTTTGCTGCTCACAATAATGGTGTCTGAACCAGCCCTGAATGCCCTGGGATGTGAGATTGATTTCTaGGCATCCTCAAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: SALLLTIMVSEPALNALGCEIDF*ASSKVF
Trigger: GAAGACTTTTGAGGATGCCCAGAAATCAATCTCACA...TCCCAGGGCATTCAGGGCTGGTTCAGACACCATTATTGTGAGCAGCAAAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CCA 90 bp AGTAAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAGATCCTTGAGCACCTaGGGGTTGCGGGAGGTATGT +
Preference number: 4 (lower is better)
Translates to: SKEKLTLLTAKVWGWGTNRSLST*GLREVC
Trigger: ACATACCTCCCGCAACCCCCAGGTGCTCAAGGATCT...GTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR TCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGCACAATAATGGTGTCTaGACCAGCCCTGAATGCCCT +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVHNNGV*TSPECP
Trigger: AGGGCATTCAGGGCTGGTTCAGACACCATTATTGTG...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR TCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGCAGAATCAGCATCACTaGGCCCCCAGCTTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKQNQHH*APSFFL
Trigger: GAGAAAGAAGCTGGGGGCTCAGTGATGCTGATTCTG...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000595564.5
CDS-3UTR CCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGGAAGTGGCTTTGTACTaGACGAACCTGTTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVEVALY*TNLFWS
Trigger: CGACCAGAACAGGTTCGTCCAGTACAAAGCCACTTC...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGATCTCTTGGAGCTGGTaGGGGCCTGAATCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKISWSW*GPESPL
Trigger: AAGAGGAGATTCAGGCCCCCACCAGCTCCAAGAGAT...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp TGCCTCCTGAGCTTCCAGTTCCTTCTCATTCATGTCCCGATGTTTGACCACAAGTGTGAGATTGATTTCTaGGCATCCTCAAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: CLLSFQFLLIHVPMFDHKCEIDF*ASSKVF
Trigger: GAAGACTTTTGAGGATGCCCAGAAATCAATCTCACA...CTTGTGGTCAAACATCGGGACATGAATGAGAAGGAACTGGAAGCTCAGGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR TCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGTCTTCTCAATGGCTGTaGTCTGGCTATCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVSSQWL*SGYPCL
Trigger: AAGACAGGGATAGCCAGATCACAGCCATTGAGAAGA...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR TCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGCACAATAATGGTGTCTaGACCAGCCCTGAATGCCCT +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKHNNGV*TSPECP
Trigger: AGGGCATTCAGGGCTGGTTCAGACACCATTATTGTG...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR GCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGTCCTCGGTAAACTGCTaGTTCACAGAAACCCCAATC +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVSSVNC*FTETPI
Trigger: GATTGGGGTTTCTGTGAAGCAGCAGTTTACCGAGGA...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR GCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGACTGGAATCAGAAGCTaGAGCTTCACTGCCATCCTC +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKTGIRS*SFTAIL
Trigger: GAGGATGGCAGTGAAGCTGCAGCTTCTGATTCCAGT...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGCCACATCTTAAAGTCTaGGAAGACAGGCATGACCTC +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVPHLKV*EDRHDL
Trigger: GAGGTCATGCCTGTCTTCCCAGACTTTAAGATGTGG...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR TCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGAGATGCCATAACGGTTaGACTCAGTGGAGATGTACT +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVRCHNG*TQWRCT
Trigger: AGTACATCTCCACTGAGTTCAACCGTTATGGCATCT...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR TCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGGAGTCAAAGATCACCTaGGCACATGGATTGATCCAC +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKESKIT*AHGLIH
Trigger: GTGGATCAATCCATGTGCTCAGGTGATCTTTGACTC...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR GCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGAGGAGGTCATGTTTGTaGTGTTTCTCCAAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVRRSCL*CFSKEV
Trigger: CACTTCCTTGGAGAAACAGCACAAACATGACCTCCT...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR GCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTCTTCCTCGGTAAACTaGTGCTTCACAGAAACCCCA +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKSSSVN*CFTETP
Trigger: TGGGGTTTCTGTGAAGCAGCAGTTTACCGAGGAAGA...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGGTTTCTCCAAGGAAGTaGCTTTGTACTGGACGAACC +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKVSPRK*LCTGRT
Trigger: GGTTCGTCCAGTACAAAGCCACTTCCTTGGAGAAAC...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGGATCTAGAAGAACATTaGGGTCGATGCGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKDLEEH*GRCGRC
Trigger: ACACCTACCGCATCGACCCCAATGTTCTTCTAGATC...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTTGTGCTACATTTTGTaGGAAACCATTGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKLCYIL*ETIGPA
Trigger: GGCAGGGCCAATGGTTTCCCACAAAATGTAGCACAA...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR TCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGCACCCTCTCGGAAGATaGAGAAGTAGTTTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKHPLGR*RSSFPH
Trigger: ATGAGGAAAACTACTTCTTCATCTTCCGAGAGGGTG...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR GCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGATACACATCATCTGGTaGATAGTCCATCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKIHIIW*IVHLLL
Trigger: GAGGAGGAGATGGACTATGCACCAGATGATGTGTAT...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGTCAATGGCTGTGATCTaGCTATCCCTGTCTTTGTAT +
Preference number: 4 (lower is better)
Translates to: REVDFINSKGLGVGNKQVSMAVI*LSLSLY
Trigger: ATACAAAGACAGGGATAGCCAGATCACAGCCATTGA...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGGTCATACACATCATCTaGTGCATAGTCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKVIHII*CIVHLL
Trigger: GAGGAGATGGACTATGCACCAGATGATGTGTATGAC...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGCACTATCAGCTTCACTaGAATCAGAAGCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKHYQLH*NQKLQL
Trigger: AAGCTGCAGCTTCTGATTCCAGTGAAGCTGATAGTG...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTTAACAGCAAAGGTTTaGGGGTGGGGAACAAACAAG +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKLTAKV*GWGTNK
Trigger: CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAA...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGTGAGATTGATTTCTaGGCATCCTCAAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKCEIDF*ASSKVF
Trigger: GAAGACTTTTGAGGATGCCCAGAAATCAATCTCACA...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGGATCACCTGAGCACATaGATTGATCCACATCTTAAA +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKDHLST*IDPHLK
Trigger: TTTAAGATGTGGATCAATCCATGTGCTCAGGTGATC...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR GCA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGAGACCACTAGAAAAGTaGTTTGCTGCTCACAATAAT +
Preference number: 4 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKRPLEK*FAAHNN
Trigger: ATTATTGTGAGCAGCAAAGCACTTTTCTAGTGGTCT...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS CCA 90 bp CTGCAGCTTCACTGCCATCCTCCTGGGCCGAGTGCTCGCTGCCACTaGGGAAGGGACTGGCGCTGCGGCTGTGGCTCCGGCTCCGCTGGC +
Preference number: 5 (lower is better)
Translates to: LQLHCHPPGPSARCH*GRDWRCGCGSGSAG
Trigger: GCCAGCGGAGCCGGAGCCACAGCCGCAGCGCCAGTCCCTTCCCCAGTGGCAGCGAGCACTCGGCCCAGGAGGATGGCAGTGAAGCTGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS CCA 90 bp ACTCGGCAGACCACTCCAGACCTGTGGCCATCCTCCCGCTGGGCCTaGGTCTGGATGGTGGGCGCCATAGCGACGAGGCGACGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: TRQTTPDLWPSSRWA*VWMVGAIATRRRQP
Trigger: GGGCTGCCGTCGCCTCGTCGCTATGGCGCCCACCATCCAGACCCAGGCCCAGCGGGAGGATGGCCACAGGTCTGGAGTGGTCTGCCGAGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595564.5
CDS GCA 90 bp CAGAAGCTGCAGCTTCACTGCCATCCTCCTGGGCCGAGTGCTCGCTaGCACTGGGGAAGGGACTGGCGCTGCGGCTGTGGCTCCGGCTCC +
Preference number: 5 (lower is better)
Translates to: QKLQLHCHPPGPSAR*HWGRDWRCGCGSGS
Trigger: GGAGCCGGAGCCACAGCCGCAGCGCCAGTCCCTTCCCCAGTGGCAGCGAGCACTCGGCCCAGGAGGATGGCAGTGAAGCTGCAGCTTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS GCA 90 bp CGCAGGCAGCACCGGGGACGGACTCGAAGCTCCGGTTCCACCAACTaGCGCCAAGACGCTGAGGACCCAACGGGTCTCCTCAGGCCGCGA +
Preference number: 5 (lower is better)
Translates to: RRQHRGRTRSSGSTN*RQDAEDPTGLLRPR
Trigger: TCGCGGCCTGAGGAGACCCGTTGGGTCCTCAGCGTCTTGGCGGCAGTTGGTGGAACCGGAGCTTCGAGTCCGTCCCCGGTGCTGCCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595564.5
ENST00000598127.1
CDS TCA 90 bp GGGACGGACTCGAAGCTCCGGTTCCACCAACTGCCGCCAAGACGCTaGGGACCCAACGGGTCTCCTCAGGCCGCGACGCCTTCGGGGAAA +
Preference number: 5 (lower is better)
Translates to: GTDSKLRFHQLPPRR*GPNGSPQAATPSGK
Trigger: TTTCCCCGAAGGCGTCGCGGCCTGAGGAGACCCGTTGGGTCCTCAGCGTCTTGGCGGCAGTTGGTGGAACCGGAGCTTCGAGTCCGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595564.5
ENST00000598127.1
CDS GCA 90 bp CACGGGCAGCCCGGGCCTCATCCTCGCTGCTCTCGTCCTCACCACTaGCACTCTTGTCACTGGCCTCGTCCCTGTCACCTTCCTCCCGTT +
Preference number: 5 (lower is better)
Translates to: HGQPGPHPRCSRPHH*HSCHWPRPCHLPPV
Trigger: AACGGGAGGAAGGTGACAGGGACGAGGCCAGTGACAAGAGTGGCAGTGGTGAGGACGAGAGCAGCGAGGATGAGGCCCGGGCTGCCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS CCA 90 bp CCTCATCCTCGCTGCTCTCGTCCTCACCACTGCCACTCTTGTCACTaGCCTCGTCCCTGTCACCTTCCTCCCGTTCACTCTCGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: PHPRCSRPHHCHSCH*PRPCHLPPVHSRCP
Trigger: CGGGCAGCGAGAGTGAACGGGAGGAAGGTGACAGGGACGAGGCCAGTGACAAGAGTGGCAGTGGTGAGGACGAGAGCAGCGAGGATGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS CCA 90 bp TCAGCTTCACTGGAATCAGAAGCTGCAGCTTCACTGCCATCCTCCTaGGCCGAGTGCTCGCTGCCACTGGGGAAGGGACTGGCGCTGCGG +
Preference number: 5 (lower is better)
Translates to: SASLESEAAASLPSS*AECSLPLGKGLALR
Trigger: CCGCAGCGCCAGTCCCTTCCCCAGTGGCAGCGAGCACTCGGCCCAGGAGGATGGCAGTGAAGCTGCAGCTTCTGATTCCAGTGAAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CAA 90 bp CCAGCCTTGGCCCGGCGCTTACTAAGGCGGACCCTAGGCTGTAATGGTGTAGCCGCACCACTCGTGTCCTaGGGGGCTGGGTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: PALARRLLRRTLGCNGVAAPLVS*GAGSES
Trigger: TGACTCAGACCCAGCCCCCAAGGACACGAGTGGTGC...GGCTACACCATTACAGCCTAGGGTCCGCCTTAGTAAGCGCCGGGCCAAGGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS GCA 90 bp CAAAGATCTCCTCTTTGTCACGGGCAGCCCGGGCCTCATCCTCGCTaGTCTCGTCCTCACCACTGCCACTCTTGTCACTGGCCTCGTCCC +
Preference number: 5 (lower is better)
Translates to: QRSPLCHGQPGPHPR*SRPHHCHSCHWPRP
Trigger: GGGACGAGGCCAGTGACAAGAGTGGCAGTGGTGAGGACGAGAGCAGCGAGGATGAGGCCCGGGCTGCCCGTGACAAAGAGGAGATCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CAA 90 bp CCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGGGAGGTATGTGCTGGGCTGCACCACTCGTGTCCTaGGGGGCTGGGTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: PQAKILEHLGVAGGMCWAAPLVS*GAGSES
Trigger: TGACTCAGACCCAGCCCCCAAGGACACGAGTGGTGC...AGCCCAGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CAA 90 bp TCTTCCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCAGAGTCCGGTGGGAATaGGGCCTGTGGCCATCCTCC +
Preference number: 5 (lower is better)
Translates to: SSSSSSGSWFSSWAFRASRVRWE*GLWPSS
Trigger: GGAGGATGGCCACAGGCCCAATTCCCACCGGACTCT...GGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CAA 90 bp CAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGGGAGGTATGTGCTGGGCTGAACGCTGGCCACCCCCATaGCTGCCGCTGTCTGAATCA +
Preference number: 5 (lower is better)
Translates to: QAKILEHLGVAGGMCWAERWPPP*LPLSES
Trigger: TGATTCAGACAGCGGCAGCAATGGGGGTGGCCAGCG...TTCAGCCCAGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CAA 90 bp CAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGGGAGGTATGTGCTGGGCTGAATTGAGCACCTGGGGGTaGCGGGAGGTATGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: QAKILEHLGVAGGMCWAELSTWG*REVCAG
Trigger: CCCAGCACATACCTCCCGCAACCCCCAGGTGCTCAA...TTCAGCCCAGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS TCA 90 bp TTCATGTCCCGATGTTTGACCACAAGCAGGGCGTTGGTGCCTGACTaGACCCCAGCCTTGGCCCGGCGCTTACTAAGGCGGACCCTGGTT +
Preference number: 5 (lower is better)
Translates to: FMSRCLTTSRALVPD*TPALARRLLRRTLV
Trigger: AACCAGGGTCCGCCTTAGTAAGCGCCGGGCCAAGGCTGGGGTTCAGTCAGGCACCAACGCCCTGCTTGTGGTCAAACATCGGGACATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS GCA 90 bp CACTCTCGCTGCCCGAGTGCTCATCTTCACTGCCCTCCTTCTCACTaGTGCTGCCCTTCTCCTGCTCCTCATCTGAGCCCCCAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: HSRCPSAHLHCPPSH*CCPSPAPHLSPQLL
Trigger: AAGAAGCTGGGGGCTCAGATGAGGAGCAGGAGAAGGGCAGCAGCAGTGAGAAGGAGGGCAGTGAAGATGAGCACTCGGGCAGCGAGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CAA 90 bp CTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGCCAAAGATCTCCTCTTaGTCACGGGCAGCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: LACVSKPQAKILEHLGVAPKISS*SRAARA
Trigger: GGCCCGGGCTGCCCGTGACAAAGAGGAGATCTTTGG...CGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS GCA 90 bp CACTGTCACTATCAGCTTCACTGGAATCAGAAGCTGCAGCTTCACTaGCATCCTCCTGGGCCGAGTGCTCGCTGCCACTGGGGAAGGGAC +
Preference number: 5 (lower is better)
Translates to: HCHYQLHWNQKLQLH*HPPGPSARCHWGRD
Trigger: GTCCCTTCCCCAGTGGCAGCGAGCACTCGGCCCAGGAGGATGGCAGTGAAGCTGCAGCTTCTGATTCCAGTGAAGCTGATAGTGACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CAA 90 bp CGGGAGGTATGTGCTGGGCTGAATGACATCATAGGGGCTGGGAGGGGAAGTAAAAGAGTCCGGTGGGAATaGGGCCTGTGGCCATCCTCC +
Preference number: 5 (lower is better)
Translates to: REVCAGLNDIIGAGRGSKRVRWE*GLWPSS
Trigger: GGAGGATGGCCACAGGCCCAATTCCCACCGGACTCT...TTTACTTCCCCTCCCAGCCCCTATGATGTCATTCAGCCCAGCACATACCTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CAA 90 bp CCAGCCTTGGCCCGGCGCTTACTAAGGCGGACCCTAGGCTGTAATGGTGTAGCCAGGCTATTGCAGTACTaGACTCGGCAGACCACTCCA +
Preference number: 5 (lower is better)
Translates to: PALARRLLRRTLGCNGVARLLQY*TRQTTP
Trigger: TGGAGTGGTCTGCCGAGTCAAGTACTGCAATAGCCT...GGCTACACCATTACAGCCTAGGGTCCGCCTTAGTAAGCGCCGGGCCAAGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CAA 90 bp CCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGCGGGAGGTATGTGCTGGGCTAGGCTATTGCAGTACTaGACTCGGCAGACCACTCCA +
Preference number: 5 (lower is better)
Translates to: PQAKILEHLGVAGGMCWARLLQY*TRQTTP
Trigger: TGGAGTGGTCTGCCGAGTCAAGTACTGCAATAGCCT...AGCCCAGCACATACCTCCCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CAA 90 bp CGGGAGGTATGTGCTGGGCTGAATGACATCATAGGGGCTGGGAGGGGAAGTAAACTCAAGCCAAGATCCTaGAGCACCTGGGGGTTGCGG +
Preference number: 5 (lower is better)
Translates to: REVCAGLNDIIGAGRGSKLKPRS*STWGLR
Trigger: CCGCAACCCCCAGGTGCTCAAGGATCTTGGCTTGAG...TTTACTTCCCCTCCCAGCCCCTATGATGTCATTCAGCCCAGCACATACCTCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS GCA 90 bp TGGGACTCAGTCACTGTCACTATCAGCTTCACTGGAATCAGAAGCTaGAGCTTCACTGCCATCCTCCTGGGCCGAGTGCTCGCTGCCACT +
Preference number: 5 (lower is better)
Translates to: WDSVTVTISFTGIRS*SFTAILLGRVLAAT
Trigger: AGTGGCAGCGAGCACTCGGCCCAGGAGGATGGCAGTGAAGCTGCAGCTTCTGATTCCAGTGAAGCTGATAGTGACAGTGACTGAGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CAA 90 bp CTCTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGATTGTCACTGCCACCTaGGGCCTGTCCTCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: LWPVFLSLKPRSLSTWGLIVTAT*GLSSVL
Trigger: GAGGACAGAGGACAGGCCCAAGGTGGCAGTGACAAT...CAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS GCA 90 bp TGTCCTCATCATCAGAGTCGGCATCGTCCTCAGAATCAGCATCACTaGCAAAGATCTCCTCTTTGTCACGGGCAGCCCGGGCCTCATCCT +
Preference number: 5 (lower is better)
Translates to: CPHHQSRHRPQNQHH*QRSPLCHGQPGPHP
Trigger: AGGATGAGGCCCGGGCTGCCCGTGACAAAGAGGAGATCTTTGGCAGTGATGCTGATTCTGAGGACGATGCCGACTCTGATGATGAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS CCA 90 bp ATAACGGTTGAACTCAGTGGAGATGTACTCTGTCTTTCGCATCCATaGCACCACCTTCGCGTGCTGCTGGGATCTCTTGGAGCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: ITVELSGDVLCLSHP*HHLRVLLGSLGAGG
Trigger: CCCACCAGCTCCAAGAGATCCCAGCAGCACGCGAAGGTGGTGCCATGGATGCGAAAGACAGAGTACATCTCCACTGAGTTCAACCGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221265.8
ENST00000416728.3
ENST00000595564.5
ENST00000595797.5
CDS-3UTR CAA 90 bp TCTTCCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCACAGAAACCCCAATCTaGACCTCAGGCTTCTCATTG +
Preference number: 5 (lower is better)
Translates to: SSSSSSGSWFSSWAFRASTETPI*TSGFSL
Trigger: CAATGAGAAGCCTGAGGTCAAGATTGGGGTTTCTGT...GGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS TCA 90 bp GCACCACTCGTGTCCTTGGGGGCTGGGTCTGAGTCAAAGATCACCTaGGCACATGGATTGATCCACATCTTAAAGTCTGGGAAGACAGGC +
Preference number: 5 (lower is better)
Translates to: APLVSLGAGSESKIT*AHGLIHILKSGKTG
Trigger: GCCTGTCTTCCCAGACTTTAAGATGTGGATCAATCCATGTGCTCAGGTGATCTTTGACTCAGACCCAGCCCCCAAGGACACGAGTGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221265.8
ENST00000416728.3
ENST00000595564.5
CDS GCA 90 bp TCGATGGTGACCCCCAGGTCTGGCTCAGTCAGGAGGTCATGTTTGTaGTGTTTCTCCAAGGAAGTGGCTTTGTACTGGACGAACCTGTTC +
Preference number: 5 (lower is better)
Translates to: SMVTPRSGSVRRSCL*CFSKEVALYWTNLF
Trigger: GAACAGGTTCGTCCAGTACAAAGCCACTTCCTTGGAGAAACAGCACAAACATGACCTCCTGACTGAGCCAGACCTGGGGGTCACCATCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221265.8
ENST00000595564.5
ENST00000595797.5
CDS CCA 90 bp GCGGTAGGTGTCAGGATTGATGAGATCGATGGTGACCCCCAGGTCTaGCTCAGTCAGGAGGTCATGTTTGTGCTGTTTCTCCAAGGAAGT +
Preference number: 5 (lower is better)
Translates to: AVGVRIDEIDGDPQV*LSQEVMFVLFLQGS
Trigger: ACTTCCTTGGAGAAACAGCACAAACATGACCTCCTGACTGAGCCAGACCTGGGGGTCACCATCGATCTCATCAATCCTGACACCTACCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221265.8
ENST00000595564.5
ENST00000595797.5
CDS-3UTR CAA 90 bp CGGGAGGTATGTGCTGGGCTGAATGACATCATAGGGGCTGGGAGGGGAAGTAAATCCAAGGAAGTGGCTTaGTACTGGACGAACCTGTTC +
Preference number: 5 (lower is better)
Translates to: REVCAGLNDIIGAGRGSKSKEVA*YWTNLF
Trigger: GAACAGGTTCGTCCAGTACAAAGCCACTTCCTTGGA...TTTACTTCCCCTCCCAGCCCCTATGATGTCATTCAGCCCAGCACATACCTCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CAA 90 bp TCTTCCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTTCTTCACGTTCCAGTaGTACTCCCGAGCAATTTTG +
Preference number: 5 (lower is better)
Translates to: SSSSSSGSWFSSWAFRASFFTFQ*YSRAIL
Trigger: CAAAATTGCTCGGGAGTACAACTGGAACGTGAAGAA...GGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS TCA 90 bp CATCTCCAACGCAGCTGCACCACTCGTGTCCTTGGGGGCTGGGTCTaGGTCAAAGATCACCTGAGCACATGGATTGATCCACATCTTAAA +
Preference number: 5 (lower is better)
Translates to: HLQRSCTTRVLGGWV*VKDHLSTWIDPHLK
Trigger: TTTAAGATGTGGATCAATCCATGTGCTCAGGTGATCTTTGACTCAGACCCAGCCCCCAAGGACACGAGTGGTGCAGCTGCGTTGGAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221265.8
ENST00000416728.3
ENST00000595564.5
CDS-3UTR CAA 90 bp CGGGAGGTATGTGCTGGGCTGAATGACATCATAGGGGCTGGGAGGGGAAGTAAAGTCAGGAGGTCATGTTaGTGCTGTTTCTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: REVCAGLNDIIGAGRGSKVRRSC*CCFSKE
Trigger: TTCCTTGGAGAAACAGCACAAACATGACCTCCTGAC...TTTACTTCCCCTCCCAGCCCCTATGATGTCATTCAGCCCAGCACATACCTCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CAA 90 bp CTTCCTCTTCCTCCTCCGGTTCGTGGTTTTCTAGCTGGGCCTTCCGTGCCTCCTTGGCTATCCCTGTCTTaGTATATTTCTTCCTCGGTA +
Preference number: 5 (lower is better)
Translates to: LPLPPPVRGFLAGPSVPPWLSLS*YISSSV
Trigger: TACCGAGGAAGAAATATACAAAGACAGGGATAGCCA...AGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CAA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGGCACCACTCGTGTCCTaGGGGGCTGGGTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: REVDFINSKGLGVGNKQVAPLVS*GAGSES
Trigger: TGACTCAGACCCAGCCCCCAAGGACACGAGTGGTGC...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CAA 90 bp CTCTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGTTCTTCACGTTCCAGTaGTACTCCCGAGCAATTTTG +
Preference number: 5 (lower is better)
Translates to: LWPVFLSLKPRSLSTWGLFFTFQ*YSRAIL
Trigger: CAAAATTGCTCGGGAGTACAACTGGAACGTGAAGAA...CAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CAA 90 bp TGCCTCCTGAGCTTCCAGTTCCTTCTCATTCATGTCCCGATGTTTGACCACAAGTTCATGTCCCGATGTTaGACCACAAGCAGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: CLLSFQFLLIHVPMFDHKFMSRC*TTSRAL
Trigger: CAACGCCCTGCTTGTGGTCAAACATCGGGACATGAA...CTTGTGGTCAAACATCGGGACATGAATGAGAAGGAACTGGAAGCTCAGGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CAA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGCGCTGGCCACCCCCATaGCTGCCGCTGTCTGAATCA +
Preference number: 5 (lower is better)
Translates to: REVDFINSKGLGVGNKQVRWPPP*LPLSES
Trigger: TGATTCAGACAGCGGCAGCAATGGGGGTGGCCAGCG...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CAA 90 bp CTCTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGATTAACAGCAAAGGTTaGGGGGTGGGGAACAAACAA +
Preference number: 5 (lower is better)
Translates to: LWPVFLSLKPRSLSTWGLINSKG*GVGNKQ
Trigger: TTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAAT...CAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CAA 90 bp AGTGCTTTGCTGCTCACAATAATGGTGTCTGAACCAGCCCTGAATGCCCTGGGAACAGAAACCCCAATCTaGACCTCAGGCTTCTCATTG +
Preference number: 5 (lower is better)
Translates to: SALLLTIMVSEPALNALGTETPI*TSGFSL
Trigger: CAATGAGAAGCCTGAGGTCAAGATTGGGGTTTCTGT...TCCCAGGGCATTCAGGGCTGGTTCAGACACCATTATTGTGAGCAGCAAAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CAA 90 bp CTCTGGCCTGTGTTTCTAAGCCTCAAGCCAAGATCCTTGAGCACCTGGGGGTTGTGGCTATCCCTGTCTTaGTATATTTCTTCCTCGGTA +
Preference number: 5 (lower is better)
Translates to: LWPVFLSLKPRSLSTWGLWLSLS*YISSSV
Trigger: TACCGAGGAAGAAATATACAAAGACAGGGATAGCCA...CAACCCCCAGGTGCTCAAGGATCTTGGCTTGAGGCTTAGAAACACAGGCCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CAA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGTCACCACTGCCACTCTaGTCACTGGCCTCGTCCCTG +
Preference number: 5 (lower is better)
Translates to: REVDFINSKGLGVGNKQVSPLPL*SLASSL
Trigger: CAGGGACGAGGCCAGTGACAAGAGTGGCAGTGGTGA...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CAA 90 bp AGTGCTTTGCTGCTCACAATAATGGTGTCTGAACCAGCCCTGAATGCCCTGGGATCGTTGTGCTACATTTaGTGGGAAACCATTGGCCCT +
Preference number: 5 (lower is better)
Translates to: SALLLTIMVSEPALNALGSLCYI*WETIGP
Trigger: AGGGCCAATGGTTTCCCACAAAATGTAGCACAACGA...TCCCAGGGCATTCAGGGCTGGTTCAGACACCATTATTGTGAGCAGCAAAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS TCA 90 bp AACAGACCACTAGAAAAGTGCTTTGCTGCTCACAATAATGGTGTCTaGACCAGCCCTGAATGCCCTGGGACTCAGTCACTGTCACTATCA +
Preference number: 5 (lower is better)
Translates to: NRPLEKCFAAHNNGV*TSPECPGTQSLSLS
Trigger: TGATAGTGACAGTGACTGAGTCCCAGGGCATTCAGGGCTGGTTCAGACACCATTATTGTGAGCAGCAAAGCACTTTTCTAGTGGTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS CCA 90 bp GCTCCTAGGCTACAAGGTTGTACAGCATGTGACTGTACTGAATACTaGTTTCCAACTCATTGTAGTAAACCCCGTCACCCTCTCGGAAGA +
Preference number: 5 (lower is better)
Translates to: APRLQGCTACDCTEY*FPTHCSKPRHPLGR
Trigger: TCTTCCGAGAGGGTGACGGGGTTTACTACAATGAGTTGGAAACCAGTATTCAGTACAGTCACATGCTGTACAACCTTGTAGCCTAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CAA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGATTGTCACTGCCACCTaGGGCCTGTCCTCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKIVTAT*GLSSVL
Trigger: GAGGACAGAGGACAGGCCCAAGGTGGCAGTGACAAT...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CAA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGAGGCTATTGCAGTACTaGACTCGGCAGACCACTCCA +
Preference number: 5 (lower is better)
Translates to: REVDFINSKGLGVGNKQVRLLQY*TRQTTP
Trigger: TGGAGTGGTCTGCCGAGTCAAGTACTGCAATAGCCT...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CAA 90 bp TGCCTCCTGAGCTTCCAGTTCCTTCTCATTCATGTCCCGATGTTTGACCACAAGTGTAATGCTGTGAGATaGATTTCTGGGCATCCTCAA +
Preference number: 5 (lower is better)
Translates to: CLLSFQFLLIHVPMFDHKCNAVR*ISGHPQ
Trigger: TTGAGGATGCCCAGAAATCAATCTCACAGCATTACA...CTTGTGGTCAAACATCGGGACATGAATGAGAAGGAACTGGAAGCTCAGGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS-3UTR CAA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGTTCATGTCCCGATGTTaGACCACAAGCAGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: REVDFINSKGLGVGNKQVFMSRC*TTSRAL
Trigger: CAACGCCCTGCTTGTGGTCAAACATCGGGACATGAA...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS GCA 90 bp GTGATCTGGCTATCCCTGTCTTTGTATATTTCTTCCTCGGTAAACTaGTGCTTCACAGAAACCCCAATCTTGACCTCAGGCTTCTCATTG +
Preference number: 5 (lower is better)
Translates to: VIWLSLSLYISSSVN*CFTETPILTSGFSL
Trigger: CAATGAGAAGCCTGAGGTCAAGATTGGGGTTTCTGTGAAGCAGCAGTTTACCGAGGAAGAAATATACAAAGACAGGGATAGCCAGATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221265.8
ENST00000416728.3
ENST00000595564.5
CDS-3UTR CAA 90 bp AGTAAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACTTCATGTCCCGATGTTaGACCACAAGCAGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: SKEKLTLLTAKVWGWGTNFMSRC*TTSRAL
Trigger: CAACGCCCTGCTTGTGGTCAAACATCGGGACATGAA...GTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS-3UTR CAA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTCCAAGGAAGTGGCTTaGTACTGGACGAACCTGTTC +
Preference number: 5 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKSKEVA*YWTNLF
Trigger: GAACAGGTTCGTCCAGTACAAAGCCACTTCCTTGGA...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CAA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGGTCAGGAGGTCATGTTaGTGCTGTTTCTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: REVDFINSKGLGVGNKQVVRRSC*CCFSKE
Trigger: TTCCTTGGAGAAACAGCACAAACATGACCTCCTGAC...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CAA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGACAGAAACCCCAATCTaGACCTCAGGCTTCTCATTG +
Preference number: 5 (lower is better)
Translates to: REVDFINSKGLGVGNKQVTETPI*TSGFSL
Trigger: CAATGAGAAGCCTGAGGTCAAGATTGGGGTTTCTGT...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS CCA 90 bp ATTGATTTCTGGGCATCCTCAAAAGTCTTCTCAATGGCTGTGATCTaGCTATCCCTGTCTTTGTATATTTCTTCCTCGGTAAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: IDFWASSKVFSMAVI*LSLSLYISSSVNCC
Trigger: GCAGCAGTTTACCGAGGAAGAAATATACAAAGACAGGGATAGCCAGATCACAGCCATTGAGAAGACTTTTGAGGATGCCCAGAAATCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221265.8
ENST00000416728.3
ENST00000595564.5
ENST00000598594.1
CDS-3UTR CAA 90 bp AGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGTGTAATGCTGTGAGATaGATTTCTGGGCATCCTCAA +
Preference number: 5 (lower is better)
Translates to: REVDFINSKGLGVGNKQVCNAVR*ISGHPQ
Trigger: TTGAGGATGCCCAGAAATCAATCTCACAGCATTACA...CACTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CAA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTTCTTCACGTTCCAGTaGTACTCCCGAGCAATTTTG +
Preference number: 5 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKFFTFQ*YSRAIL
Trigger: CAAAATTGCTCGGGAGTACAACTGGAACGTGAAGAA...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CAA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGATTAACAGCAAAGGTTaGGGGGTGGGGAACAAACAA +
Preference number: 5 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKINSKG*GVGNKQ
Trigger: TTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAAT...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CAA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGGCTATCCCTGTCTTaGTATATTTCTTCCTCGGTA +
Preference number: 5 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKWLSLS*YISSSV
Trigger: TACCGAGGAAGAAATATACAAAGACAGGGATAGCCA...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS-3UTR CAA 90 bp AAAGAGAAGTTGACTTTATTAACAGCAAAGGTTTGGGGGTGGGGAACAAACAAGTGTAATGCTGTGAGATaGATTTCTGGGCATCCTCAA +
Preference number: 5 (lower is better)
Translates to: KEKLTLLTAKVWGWGTNKCNAVR*ISGHPQ
Trigger: TTGAGGATGCCCAGAAATCAATCTCACAGCATTACA...CTTGTTTGTTCCCCACCCCCAAACCTTTGCTGTTAATAAAGTCAACTTCTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS CCA 72 bp TTGGGCCTGTGGCCATCCTCCCGCTGGGCCTGGGTCTaGATGGTGGGCGCCATAGCGACGAGGCGACGGCAG +
Preference number: 6 (lower is better)
Translates to: LGLWPSSRWAWV*MVGAIATRRRQ
Trigger: CTGCCGTCGCCTCGTCGCTATGGCGCCCACCATCCAGACCCAGGCCCAGCGGGAGGATGGCCACAGGCCCAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221265.8
ENST00000416728.3
ENST00000595797.5
ENST00000597365.1
ENST00000598127.1
CDS CCA 72 bp CCAGACCTGTGGCCATCCTCCCGCTGGGCCTGGGTCTaGATGGTGGGCGCCATAGCGACGAGGCGACGGCAG +
Preference number: 6 (lower is better)
Translates to: PDLWPSSRWAWV*MVGAIATRRRQ
Trigger: CTGCCGTCGCCTCGTCGCTATGGCGCCCACCATCCAGACCCAGGCCCAGCGGGAGGATGGCCACAGGTCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595564.5
CDS TCA 72 bp GGTGGGCGGGCGAGAAGAGCTCCAGCGAGACTCAGGTaGACGCGCAGGCAGCACCGGGGACGGACTCGAAGC +
Preference number: 6 (lower is better)
Translates to: GGRARRAPARLR*TRRQHRGRTRS
Trigger: GCTTCGAGTCCGTCCCCGGTGCTGCCTGCGCGTTCACCTGAGTCTCGCTGGAGCTCTTCTCGCCCGCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221265.8
ENST00000416728.3
ENST00000595564.5
ENST00000595797.5
ENST00000597365.1
ENST00000598127.1
CDS GCA 72 bp GAAGCTGCAGCTTCACTGCCATCCTCCTGGGCCGAGTaGTCGCTGCCACTGGGGAAGGGACTGGCGCTGCGG +
Preference number: 6 (lower is better)
Translates to: EAAASLPSSWAE*SLPLGKGLALR
Trigger: CCGCAGCGCCAGTCCCTTCCCCAGTGGCAGCGAGCACTCGGCCCAGGAGGATGGCAGTGAAGCTGCAGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS CCA 72 bp GGCGCCGCTCCCCGCGGAAAGTGGGTTGAGATGAGGTaGGCGGGCGAGAAGAGCTCCAGCGAGACTCAGGTG +
Preference number: 6 (lower is better)
Translates to: GAAPRGKWVEMR*AGEKSSSETQV
Trigger: CACCTGAGTCTCGCTGGAGCTCTTCTCGCCCGCCCACCTCATCTCAACCCACTTTCCGCGGGGAGCGGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221265.8
ENST00000416728.3
ENST00000595564.5
ENST00000595797.5
ENST00000597365.1
ENST00000598127.1
CDS CCA 72 bp AGGAAGGCCCAGCTTGGCGCCGCTCCCCGCGGAAAGTaGGTTGAGATGAGGTGGGCGGGCGAGAAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: RKAQLGAAPRGK*VEMRWAGEKSS
Trigger: GGAGCTCTTCTCGCCCGCCCACCTCATCTCAACCCACTTTCCGCGGGGAGCGGCGCCAAGCTGGGCCTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221265.8
ENST00000416728.3
ENST00000595564.5
ENST00000595797.5
ENST00000597365.1
ENST00000598127.1
CDS CCA 72 bp ACCACTCCAGACCTGTGGCCATCCTCCCGCTGGGCCTaGGTCTGGATGGTGGGCGCCATAGCGACGAGGCGA +
Preference number: 6 (lower is better)
Translates to: TTPDLWPSSRWA*VWMVGAIATRR
Trigger: TCGCCTCGTCGCTATGGCGCCCACCATCCAGACCCAGGCCCAGCGGGAGGATGGCCACAGGTCTGGAGTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595564.5
CDS TCA 72 bp AGCTTGGCGCCGCTCCCCGCGGAAAGTGGGTTGAGATaGGGTGGGCGGGCGAGAAGAGCTCCAGCGAGACTC +
Preference number: 6 (lower is better)
Translates to: SLAPLPAESGLR*GGRARRAPARL
Trigger: GAGTCTCGCTGGAGCTCTTCTCGCCCGCCCACCTCATCTCAACCCACTTTCCGCGGGGAGCGGCGCCAAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221265.8
ENST00000416728.3
ENST00000595564.5
ENST00000595797.5
ENST00000597365.1
ENST00000598127.1
CDS TCA 72 bp TCGAAGCTCCGGTTCCACCAACTGCCGCCAAGACGCTaGGGACCCAACGGGTCTCCTCAGGCCGCGACGCCT +
Preference number: 6 (lower is better)
Translates to: SKLRFHQLPPRR*GPNGSPQAATP
Trigger: AGGCGTCGCGGCCTGAGGAGACCCGTTGGGTCCTCAGCGTCTTGGCGGCAGTTGGTGGAACCGGAGCTTCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595564.5
ENST00000598127.1
CDS GCA 72 bp CACCGGGGACGGACTCGAAGCTCCGGTTCCACCAACTaGCGCCAAGACGCTGAGGACCCAACGGGTCTCCTC +
Preference number: 6 (lower is better)
Translates to: HRGRTRSSGSTN*RQDAEDPTGLL
Trigger: GAGGAGACCCGTTGGGTCCTCAGCGTCTTGGCGGCAGTTGGTGGAACCGGAGCTTCGAGTCCGTCCCCGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595564.5
ENST00000598127.1
CDS CCA 72 bp CAGCCCCACTGCCCCACCGCTCCTGGGAAAGCACAGTaGGGCTCACCTCTCAGGCAGAGTCCGGTGGGAATT +
Preference number: 6 (lower is better)
Translates to: QPHCPTAPGKAQ*GSPLRQSPVGI
Trigger: AATTCCCACCGGACTCTGCCTGAGAGGTGAGCCCCACTGTGCTTTCCCAGGAGCGGTGGGGCAGTGGGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598127.1
CDS CAA 90 bp GCCCGGGCCTCATCCTCGCTGCTCTCGTCCTCACCACTGCCACTCTaGTCACTGGCCTCGTCCCTGTCACCTTCCTCCCGTTCACTCTCG +
Preference number: 6 (lower is better)
Translates to: ARASSSLLSSSPLPL*SLASSLSPSSRSLS
Trigger: CGAGAGTGAACGGGAGGAAGGTGACAGGGACGAGGCCAGTGACAAGAGTGGCAGTGGTGAGGACGAGAGCAGCGAGGATGAGGCCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS GCA 72 bp CCCGGGCCTCATCCTCGCTGCTCTCGTCCTCACCACTaGCACTCTTGTCACTGGCCTCGTCCCTGTCACCTT +
Preference number: 6 (lower is better)
Translates to: PGPHPRCSRPHH*HSCHWPRPCHL
Trigger: AAGGTGACAGGGACGAGGCCAGTGACAAGAGTGGCAGTGGTGAGGACGAGAGCAGCGAGGATGAGGCCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS GCA 72 bp CCTCTTTGTCACGGGCAGCCCGGGCCTCATCCTCGCTaGTCTCGTCCTCACCACTGCCACTCTTGTCACTGG +
Preference number: 6 (lower is better)
Translates to: PLCHGQPGPHPR*SRPHHCHSCHW
Trigger: CCAGTGACAAGAGTGGCAGTGGTGAGGACGAGAGCAGCGAGGATGAGGCCCGGGCTGCCCGTGACAAAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS CCA 72 bp CTGGAATCAGAAGCTGCAGCTTCACTGCCATCCTCCTaGGCCGAGTGCTCGCTGCCACTGGGGAAGGGACTG +
Preference number: 6 (lower is better)
Translates to: LESEAAASLPSS*AECSLPLGKGL
Trigger: CAGTCCCTTCCCCAGTGGCAGCGAGCACTCGGCCCAGGAGGATGGCAGTGAAGCTGCAGCTTCTGATTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS GCA 72 bp CCTCGTCCCTGTCACCTTCCTCCCGTTCACTCTCGCTaGCCGAGTGCTCATCTTCACTGCCCTCCTTCTCAC +
Preference number: 6 (lower is better)
Translates to: PRPCHLPPVHSR*PSAHLHCPPSH
Trigger: GTGAGAAGGAGGGCAGTGAAGATGAGCACTCGGGCAGCGAGAGTGAACGGGAGGAAGGTGACAGGGACGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221265.8
CDS CAA 90 bp ATGAACTTGGGGTCGAAGGGGATATCAGGGAGGCTATTGCAGTACTaGACTCGGCAGACCACTCCAGACCTGTGGCCATCCTCCCGCTGG +
Preference number: 6 (lower is better)
Translates to: MNLGSKGISGRLLQY*TRQTTPDLWPSSRW
Trigger: CCAGCGGGAGGATGGCCACAGGTCTGGAGTGGTCTGCCGAGTCAAGTACTGCAATAGCCTCCCTGATATCCCCTTCGACCCCAAGTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595564.5
CDS CAA 72 bp GGGTCGAAGGGGATATCAGGGAGGCTATTGCAGTACTaGACTCGGCAGACCACTCCAGACCTGTGGCCATCC +
Preference number: 6 (lower is better)
Translates to: GSKGISGRLLQY*TRQTTPDLWPS
Trigger: GGATGGCCACAGGTCTGGAGTGGTCTGCCGAGTCAAGTACTGCAATAGCCTCCCTGATATCCCCTTCGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595564.5
CDS CAA 90 bp ATGAACTTGGGGTCGAAGGGGATATCAGGGAGGCTATTGCAGTACTaGACTCGGCAGACCACTCCAGACCTCTCAGGCAGAGTCCGGTGG +
Preference number: 6 (lower is better)
Translates to: MNLGSKGISGRLLQY*TRQTTPDLSGRVRW
Trigger: CCACCGGACTCTGCCTGAGAGGTCTGGAGTGGTCTGCCGAGTCAAGTACTGCAATAGCCTCCCTGATATCCCCTTCGACCCCAAGTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221265.8
ENST00000416728.3
ENST00000595797.5
ENST00000597365.1
CDS TCA 72 bp CGCAGCTGCACCACTCGTGTCCTTGGGGGCTGGGTCTaGGTCAAAGATCACCTGAGCACATGGATTGATCCA +
Preference number: 6 (lower is better)
Translates to: RSCTTRVLGGWV*VKDHLSTWIDP
Trigger: TGGATCAATCCATGTGCTCAGGTGATCTTTGACTCAGACCCAGCCCCCAAGGACACGAGTGGTGCAGCTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221265.8
ENST00000416728.3
ENST00000595564.5
CDS TCA 72 bp GGTCGAAGGGGATATCAGGGAGGCTATTGCAGTACTTaGCTCGGCAGACCACTCCAGACCTGTGGCCATCCT +
Preference number: 6 (lower is better)
Translates to: GRRGYQGGYCST*LGRPLQTCGHP
Trigger: AGGATGGCCACAGGTCTGGAGTGGTCTGCCGAGTCAAGTACTGCAATAGCCTCCCTGATATCCCCTTCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595564.5
CDS CCA 72 bp ACATCATCTCCAACGCAGCTGCACCACTCGTGTCCTTaGGGGCTGGGTCTGAGTCAAAGATCACCTGAGCAC +
Preference number: 6 (lower is better)
Translates to: TSSPTQLHHSCP*GLGLSQRSPEH
Trigger: GTGCTCAGGTGATCTTTGACTCAGACCCAGCCCCCAAGGACACGAGTGGTGCAGCTGCGTTGGAGATGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221265.8
ENST00000416728.3
ENST00000595564.5
CDS CCA 72 bp CTTTCTACCTCCCACCTTGGGCCTGACCTTAAAGTCTaGGAAGACAGGCATGACCTCCACCGGTGTGACTCG +
Preference number: 6 (lower is better)
Translates to: LSTSHLGPDLKV*EDRHDLHRCDS
Trigger: CGAGTCACACCGGTGGAGGTCATGCCTGTCTTCCCAGACTTTAAGGTCAGGCCCAAGGTGGGAGGTAGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598594.1
CDS CAA 72 bp GGGTCGAAGGGGATATCAGGGAGGCTATTGCAGTACTaGACTCGGCAGACCACTCCAGACCTCTCAGGCAGA +
Preference number: 6 (lower is better)
Translates to: GSKGISGRLLQY*TRQTTPDLSGR
Trigger: TCTGCCTGAGAGGTCTGGAGTGGTCTGCCGAGTCAAGTACTGCAATAGCCTCCCTGATATCCCCTTCGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221265.8
ENST00000416728.3
ENST00000595797.5
ENST00000597365.1
CDS GCA 72 bp GTCACTGTCACTATCAGCTTCACTGGAATCAGAAGCTaGAGCTTCACTGCCATCCTCCTGGGCCGAGTGCTC +
Preference number: 6 (lower is better)
Translates to: VTVTISFTGIRS*SFTAILLGRVL
Trigger: GAGCACTCGGCCCAGGAGGATGGCAGTGAAGCTGCAGCTTCTGATTCCAGTGAAGCTGATAGTGACAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS CAA 90 bp AGATGGGAACAGGCACAAATAGGCTGTCCCTTTCTACCTCCCACCTaGGGCCTGACCTTAAAGTCTGGGAAGACAGGCATGACCTCCACC +
Preference number: 6 (lower is better)
Translates to: RWEQAQIGCPFLPPT*GLTLKSGKTGMTST
Trigger: GGTGGAGGTCATGCCTGTCTTCCCAGACTTTAAGGTCAGGCCCAAGGTGGGAGGTAGAAAGGGACAGCCTATTTGTGCCTGTTCCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598594.1
CDS GCA 72 bp ACCCCCAGGTCTGGCTCAGTCAGGAGGTCATGTTTGTaGTGTTTCTCCAAGGAAGTGGCTTTGTACTGGACG +
Preference number: 6 (lower is better)
Translates to: TPRSGSVRRSCL*CFSKEVALYWT
Trigger: CGTCCAGTACAAAGCCACTTCCTTGGAGAAACAGCACAAACATGACCTCCTGACTGAGCCAGACCTGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221265.8
ENST00000595564.5
ENST00000595797.5
CDS CCA 72 bp GAACTCAGTGGAGATGTACTCTGTCTTTCGCATCCATaGCACCACCTTCGCGTGCTGCTGGGATCTCTTGGA +
Preference number: 6 (lower is better)
Translates to: ELSGDVLCLSHP*HHLRVLLGSLG
Trigger: TCCAAGAGATCCCAGCAGCACGCGAAGGTGGTGCCATGGATGCGAAAGACAGAGTACATCTCCACTGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221265.8
ENST00000416728.3
ENST00000595564.5
ENST00000595797.5
CDS CCA 72 bp GCCCTGGGACTCAGTCACTGTCACTATCAGCTTCACTaGAATCAGAAGCTGCAGCTTCACTGCCATCCTCCT +
Preference number: 6 (lower is better)
Translates to: ALGLSHCHYQLH*NQKLQLHCHPP
Trigger: AGGAGGATGGCAGTGAAGCTGCAGCTTCTGATTCCAGTGAAGCTGATAGTGACAGTGACTGAGTCCCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS CAA 72 bp GTGACCCCCAGGTCTGGCTCAGTCAGGAGGTCATGTTaGTGCTGTTTCTCCAAGGAAGTGGCTTTGTACTGG +
Preference number: 6 (lower is better)
Translates to: VTPRSGSVRRSC*CCFSKEVALYW
Trigger: CCAGTACAAAGCCACTTCCTTGGAGAAACAGCACAAACATGACCTCCTGACTGAGCCAGACCTGGGGGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221265.8
ENST00000595564.5
ENST00000595797.5
CDS CAA 72 bp CAGGCACAAATAGGCTGTCCCTTTCTACCTCCCACCTaGGGCCTGACCTTAAAGTCTGGGAAGACAGGCATG +
Preference number: 6 (lower is better)
Translates to: QAQIGCPFLPPT*GLTLKSGKTGM
Trigger: CATGCCTGTCTTCCCAGACTTTAAGGTCAGGCCCAAGGTGGGAGGTAGAAAGGGACAGCCTATTTGTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598594.1
CDS CAA 90 bp AGATCGATGGTGACCCCCAGGTCTGGCTCAGTCAGGAGGTCATGTTaGTGCTGTTTCTCCAAGGAAGTGGCTTTGTACTGGACGAACCTG +
Preference number: 6 (lower is better)
Translates to: RSMVTPRSGSVRRSC*CCFSKEVALYWTNL
Trigger: CAGGTTCGTCCAGTACAAAGCCACTTCCTTGGAGAAACAGCACAAACATGACCTCCTGACTGAGCCAGACCTGGGGGTCACCATCGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221265.8
ENST00000595564.5
ENST00000595797.5
CDS CCA 72 bp GTCAGGATTGATGAGATCGATGGTGACCCCCAGGTCTaGCTCAGTCAGGAGGTCATGTTTGTGCTGTTTCTC +
Preference number: 6 (lower is better)
Translates to: VRIDEIDGDPQV*LSQEVMFVLFL
Trigger: GAGAAACAGCACAAACATGACCTCCTGACTGAGCCAGACCTGGGGGTCACCATCGATCTCATCAATCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221265.8
ENST00000595564.5
ENST00000595797.5
CDS CAA 72 bp GGGTCGAAGGGGATATCAGGGAGGCTATTGCAGTACTaGACTCGGCAGACCACTCCAGACCTAGGAACATTA +
Preference number: 6 (lower is better)
Translates to: GSKGISGRLLQY*TRQTTPDLGTL
Trigger: TAATGTTCCTAGGTCTGGAGTGGTCTGCCGAGTCAAGTACTGCAATAGCCTCCCTGATATCCCCTTCGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598127.1
CDS CAA 90 bp ATGAACTTGGGGTCGAAGGGGATATCAGGGAGGCTATTGCAGTACTaGACTCGGCAGACCACTCCAGACCTAGGAACATTAGTGGCTCAA +
Preference number: 6 (lower is better)
Translates to: MNLGSKGISGRLLQY*TRQTTPDLGTLVAQ
Trigger: TTGAGCCACTAATGTTCCTAGGTCTGGAGTGGTCTGCCGAGTCAAGTACTGCAATAGCCTCCCTGATATCCCCTTCGACCCCAAGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598127.1
CDS TCA 72 bp GTGTCCTTGGGGGCTGGGTCTGAGTCAAAGATCACCTaGGCACATGGATTGATCCACATCTTAAAGTCTGGG +
Preference number: 6 (lower is better)
Translates to: VSLGAGSESKIT*AHGLIHILKSG
Trigger: CCCAGACTTTAAGATGTGGATCAATCCATGTGCTCAGGTGATCTTTGACTCAGACCCAGCCCCCAAGGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221265.8
ENST00000416728.3
ENST00000595564.5
CDS TCA 72 bp CTAGAAAAGTGCTTTGCTGCTCACAATAATGGTGTCTaGACCAGCCCTGAATGCCCTGGGACTCAGTCACTG +
Preference number: 6 (lower is better)
Translates to: LEKCFAAHNNGV*TSPECPGTQSL
Trigger: CAGTGACTGAGTCCCAGGGCATTCAGGGCTGGTTCAGACACCATTATTGTGAGCAGCAAAGCACTTTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221265.8
ENST00000595564.5
CDS GCA 72 bp TCCCTGTCTTTGTATATTTCTTCCTCGGTAAACTGCTaGTTCACAGAAACCCCAATCTTGACCTCAGGCTTC +
Preference number: 6 (lower is better)
Translates to: SLSLYISSSVNC*FTETPILTSGF
Trigger: GAAGCCTGAGGTCAAGATTGGGGTTTCTGTGAAGCAGCAGTTTACCGAGGAAGAAATATACAAAGACAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221265.8
ENST00000416728.3
ENST00000595564.5
CDS CAA 90 bp TCCTCAAAAGTCTTCTCAATGGCTGTGATCTGGCTATCCCTGTCTTaGTATATTTCTTCCTCGGTAAACTGCTGCTTCACAGAAACCCCA +
Preference number: 6 (lower is better)
Translates to: SSKVFSMAVIWLSLS*YISSSVNCCFTETP
Trigger: TGGGGTTTCTGTGAAGCAGCAGTTTACCGAGGAAGAAATATACAAAGACAGGGATAGCCAGATCACAGCCATTGAGAAGACTTTTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221265.8
ENST00000416728.3
ENST00000595564.5
ENST00000598594.1
CDS CCA 72 bp TGGGCATCCTCAAAAGTCTTCTCAATGGCTGTGATCTaGCTATCCCTGTCTTTGTATATTTCTTCCTCGGTA +
Preference number: 6 (lower is better)
Translates to: WASSKVFSMAVI*LSLSLYISSSV
Trigger: TACCGAGGAAGAAATATACAAAGACAGGGATAGCCAGATCACAGCCATTGAGAAGACTTTTGAGGATGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221265.8
ENST00000416728.3
ENST00000595564.5
ENST00000598594.1
CDS CCA 72 bp CTACAAGGTTGTACAGCATGTGACTGTACTGAATACTaGTTTCCAACTCATTGTAGTAAACCCCGTCACCCT +
Preference number: 6 (lower is better)
Translates to: LQGCTACDCTEY*FPTHCSKPRHP
Trigger: AGGGTGACGGGGTTTACTACAATGAGTTGGAAACCAGTATTCAGTACAGTCACATGCTGTACAACCTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416728.3
CDS CAA 72 bp GTCTTCTCAATGGCTGTGATCTGGCTATCCCTGTCTTaGTATATTTCTTCCTCGGTAAACTGCTGCTTCACA +
Preference number: 6 (lower is better)
Translates to: VFSMAVIWLSLS*YISSSVNCCFT
Trigger: TGTGAAGCAGCAGTTTACCGAGGAAGAAATATACAAAGACAGGGATAGCCAGATCACAGCCATTGAGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221265.8
ENST00000416728.3
ENST00000595564.5
ENST00000598594.1