RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PADI6 (Homo sapiens)

Ensembl gene IDs: ENSG00000276747

Ensembl transcript IDs: ENST00000619609.1, ENST00000625380.1

Found 249 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGTaGCAGTGGGCCATCCACGCTGGGGCAGAGCTGGCAGCTCCAGGG +
Preference number: 1 (lower is better)
Translates to: LSSLLYWAKNHAVAW*QWAIHAGAELAAPG
Trigger: CCCTGGAGCTGCCAGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
3UTR GCA 90 bp GCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTaGATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCTGGCAGC +
Preference number: 1 (lower is better)
Translates to: AWTLQPPLLGKESCC*MVTVGHPRWGRAGS
Trigger: GCTGCCAGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
3UTR GCA 90 bp GGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTaGCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTG +
Preference number: 1 (lower is better)
Translates to: GSEGRSGQTGKKGFC*LDSPASSTGQRIML
Trigger: CAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
3UTR GCA 90 bp TCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATaGTGTTGCATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCT +
Preference number: 1 (lower is better)
Translates to: SVAWTLQPPLLGKES*CCMVTVGHPRWGRA
Trigger: AGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
3UTR-3UTR CCA 90 bp ACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGACGCTGGGGCAGAGCTaGCAGCTCCAGGGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: TGSEGRSGQTGKKGFCCLTLGQS*QLQGLG
Trigger: ACCCAGGCCCTGGAGCTGCCAGCTCTGCCCCAGCGT...CAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
3UTR CAA 90 bp TGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTaGCATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCTGGCAG +
Preference number: 2 (lower is better)
Translates to: CLDSPASSTGQRIML*HGDSGPSTLGQSWQ
Trigger: CTGCCAGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
3UTR-3UTR CCA 90 bp TGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGTACGCTGGGGCAGAGCTaGCAGCTCCAGGGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: CLDSPASSTGQRIMLLHGTLGQS*QLQGLG
Trigger: ACCCAGGCCCTGGAGCTGCCAGCTCTGCCCCAGCGT...ACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
3UTR-3UTR GCA 90 bp CCCATAGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGCTGGGCAAAGAATCATaGTGTTGCATGGTGACAGTG +
Preference number: 2 (lower is better)
Translates to: PIGVQAGGICHPTGSEGRLGKES*CCMVTV
Trigger: CACTGTCACCATGCAACAGCATGATTCTTTGCCCAG...CCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
3UTR-3UTR CCA 90 bp CACCCACCAGCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTGTGGGCCATCCACGCTaGGGCAGAGCTGGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: HPPALYWLFSKRHLAEHFVGHPR*GRAGSS
Trigger: GGAGCTGCCAGCTCTGCCCCAGCGTGGATGGCCCAC...AAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
3UTR-3UTR CCA 90 bp CATTCACACCCACCAGCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAAGTGGGCCATCCACGCTaGGGCAGAGCTGGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: HSHPPALYWLFSKRHLAEVGHPR*GRAGSS
Trigger: GGAGCTGCCAGCTCTGCCCCAGCGTGGATGGCCCAC...TTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTGTGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
3UTR-3UTR TCA 90 bp GCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTTGCATCTTTCATGCTGTTGCATGGTaGCAGTGGGCCATCCACGCT +
Preference number: 2 (lower is better)
Translates to: ALYWLFSKRHLAEHFCIFHAVAW*QWAIHA
Trigger: AGCGTGGATGGCCCACTGTCACCATGCAACAGCATG...AAAGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
3UTR-3UTR GCA 90 bp CATTCACACCCACCAGCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACTGGGCAAAGAATCATaGTGTTGCATGGTGACAGTG +
Preference number: 2 (lower is better)
Translates to: HSHPPALYWLFSKRHLAELGKES*CCMVTV
Trigger: CACTGTCACCATGCAACAGCATGATTCTTTGCCCAG...TTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTGTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
3UTR CCA 72 bp CATAGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTaGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAA +
Preference number: 3 (lower is better)
Translates to: HRGSSWRHLPSY*VRGSVGADREE
Trigger: TTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
3UTR GCA 72 bp GGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTaGCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGA +
Preference number: 3 (lower is better)
Translates to: GRSGQTGKKGFC*LDSPASSTGQR
Trigger: TCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
3UTR TCA 72 bp CTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGTaGCAGTGGGCCATCCACGCTGGGGCAGAGCTGGCA +
Preference number: 3 (lower is better)
Translates to: LLYWAKNHAVAW*QWAIHAGAELA
Trigger: TGCCAGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
3UTR GCA 72 bp TGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATaGTGTTGCATGGTGACAGTGGGCCATCCACGCTGG +
Preference number: 3 (lower is better)
Translates to: WTLQPPLLGKES*CCMVTVGHPRW
Trigger: CCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
3UTR-3UTR CAA 90 bp TTCCCCATAGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCAAAGAATCATGCTGTaGCATGGTGACAGTGGGCCA +
Preference number: 3 (lower is better)
Translates to: FPIGVQAGGICHPTGSEGQRIML*HGDSGP
Trigger: TGGCCCACTGTCACCATGCAACAGCATGATTCTTTG...ACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCTATGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp TGTTGCATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCTGGCAGCTCCAGGCATCCTGGAGCCACCTaGCCAGGCGGTTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: CCMVTVGHPRWGRAGSSRHPGAT*PGGWGP
Trigger: AGGACCCCAACCGCCTGGGCAGGTGGCTCCAGGATG...CCTGGAGCTGCCAGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp TCATGCTGTTGCATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCTGGCAGCACGCTGGGGCAGAGCTaGCAGCTCCAGGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SCCCMVTVGHPRWGRAGSTLGQS*QLQGLG
Trigger: ACCCAGGCCCTGGAGCTGCCAGCTCTGCCCCAGCGT...GCTGCCAGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CCCATAGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGGGAGGGTCTTACTCATaGCCCGGCCCTCTGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PIGVQAGGICHPTGSEGRGGSYS*PGPLRW
Trigger: CCAGCGCAGAGGGCCGGGCCATGAGTAAGACCCTCC...CCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCTATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CATCCTACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTGTGGGCCATCCACGCTaGGGCAGAGCTGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HPTGSEGRSGQTGKKGFCVGHPR*GRAGSS
Trigger: GGAGCTGCCAGCTCTGCCCCAGCGTGGATGGCCCAC...ACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp CTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGTCGAGATCGGCGGCCTaGGGTGTGTCGAGGATCAAG +
Preference number: 4 (lower is better)
Translates to: LGPRVGRGRQGRKGSVAWSRSAA*GVSRIK
Trigger: CTTGATCCTCGACACACCTCAGGCCGCCGATCTCGA...CCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp AGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGTGTCCACAAAACCCTaGAGCTGCAGCTCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: SWRHLPSYWVRGSVGADRVSTKP*SCSSLH
Trigger: GTGCAGGGAGCTGCAGCTGCAGGGTTTTGTGGACAC...CCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp TGTTGCATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCTGGCAGCTCCAGGCATGCTGTTGCATGGTaGCAGTGGGCCATCCACGCT +
Preference number: 4 (lower is better)
Translates to: CCMVTVGHPRWGRAGSSRHAVAW*QWAIHA
Trigger: AGCGTGGATGGCCCACTGTCACCATGCAACAGCATG...CCTGGAGCTGCCAGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CCTACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCTCACTGTGGCGTACGTaGGATCAGACAGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: PTGSEGRSGQTGKKGFCCSLWRT*DQTGAT
Trigger: GGTGGCCCCTGTCTGATCCCACGTACGCCACAGTGA...GCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CCCATAGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCACTGTGGCGTACGTaGGATCAGACAGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: PIGVQAGGICHPTGSEGRSLWRT*DQTGAT
Trigger: GGTGGCCCCTGTCTGATCCCACGTACGCCACAGTGA...CCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCTATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp AGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGACCTCTTGGGCTGCTaGTCAGAGGGGATGTTAGTC +
Preference number: 4 (lower is better)
Translates to: SWRHLPSYWVRGSVGADRDLLGC*SEGMLV
Trigger: GACTAACATCCCCTCTGACCAGCAGCCCAAGAGGTC...CCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGCAGGTCCCCTTGATTTaGGGCCCAAAAGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LGPRVGRGRQGRKGSVAWQVPLI*GPKGLG
Trigger: CCCCAAGCCTTTTGGGCCCCAAATCAAGGGGACCTG...CCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp ACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGCATTTGCCATCCTACTaGGTCCGAGGGTCGGTCGGG +
Preference number: 4 (lower is better)
Translates to: TGSEGRSGQTGKKGFCCLHLPSY*VRGSVG
Trigger: CCCGACCGACCCTCGGACCCAGTAGGATGGCAAATG...CAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp ACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGCAGAGCCATGGATGGTaGAGCACTGGCACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TGSEGRSGQTGKKGFCCLQSHGW*STGTSG
Trigger: CCCAGAAGTGCCAGTGCTTCACCATCCATGGCTCTG...CAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp TCATGCTGTTGCATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCTGGCAGCCAGAGCCATGGATGGTaGAGCACTGGCACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SCCCMVTVGHPRWGRAGSQSHGW*STGTSG
Trigger: CCCAGAAGTGCCAGTGCTTCACCATCCATGGCTCTG...GCTGCCAGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp CCATCCTACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGGCTGGGGAATCTCGATaGTGTCCTGTTCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: PSYWVRGSVGADREERVLAGESR*CPVPPG
Trigger: GCCTGGTGGAACAGGACATCATCGAGATTCCCCAGC...CAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp GGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCGGGGCAAGGACCTCTTGGGCTaGTGGTCAGAGGGGATGTTA +
Preference number: 4 (lower is better)
Translates to: GFKLAAFAILLGPRVGRGKDLLG*WSEGML
Trigger: TAACATCCCCTCTGACCAGCAGCCCAAGAGGTCCTT...GCCCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp TCATGCTGTTGCATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCTGGCAGCGGGGCCACCAGATGGTaGCGTCCTCCTTCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: SCCCMVTVGHPRWGRAGSGATRW*RPPSQK
Trigger: TTTCTGAGAAGGAGGACGCCACCATCTGGTGGCCCC...GCTGCCAGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp TCATGCTGTTGCATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCTGGCAGCCCAGGGACAGGTGGATaGTACTCTGGAAGGACATGG +
Preference number: 4 (lower is better)
Translates to: SCCCMVTVGHPRWGRAGSPGTGG*YSGRTW
Trigger: CCATGTCCTTCCAGAGTATCATCCACCTGTCCCTGG...GCTGCCAGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp AGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCGGGTGGGCCCATAGTATGTaGCCGAGACCTTATCCGCAT +
Preference number: 4 (lower is better)
Translates to: RGSSWRHLPSYWVRGSVGWAHSM*PRPYPH
Trigger: ATGCGGATAAGGTCTCGGTCACATACTATGGGCCCA...CCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp CCCATAGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGAGACCTCAATGCCAGTaGGGTACAGCACAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PIGVQAGGICHPTGSEGRRPQCQ*GTAQLC
Trigger: GCACAGCTGTGCTGTACCTCACTGGCATTGAGGTCT...CCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCTATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp CGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTATCGAGATCGGCGGCCTaGGGTGTGTCGAGGATCAAG +
Preference number: 4 (lower is better)
Translates to: RGRQGRKGSVAWTLQPPLSRSAA*GVSRIK
Trigger: CTTGATCCTCGACACACCTCAGGCCGCCGATCTCGA...TAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp CCCATAGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGCTTTCCCTTGGACCTTaGCAGGTGGGGACACCATCA +
Preference number: 4 (lower is better)
Translates to: PIGVQAGGICHPTGSEGRLSLGP*QVGTPS
Trigger: TGATGGTGTCCCCACCTGTCAAGGTCCAAGGGAAAG...CCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCTATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp CTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGAAGGACCTCTTGGGCTaGTGGTCAGAGGGGATGTTA +
Preference number: 4 (lower is better)
Translates to: LGPRVGRGRQGRKGSVAWKDLLG*WSEGML
Trigger: TAACATCCCCTCTGACCAGCAGCCCAAGAGGTCCTT...CCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp TACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTCAAGCTGGCGGCATTTaGCATCCTACTGGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: YWVRGSVGADREERVLLPQAGGI*HPTGSE
Trigger: CTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTG...AGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp GGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCAGGTGGATGATACTCTaGAAGGACATGGCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: GSVGADREERVLLPGLSSRWMIL*KDMARP
Trigger: GGGCCGAGCCATGTCCTTCCAGAGTATCATCCACCT...GCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CCCATAGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGAGGTGGATGATACTCTaGAAGGACATGGCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: PIGVQAGGICHPTGSEGRRWMIL*KDMARP
Trigger: GGGCCGAGCCATGTCCTTCCAGAGTATCATCCACCT...CCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCTATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp ACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGAACACACAAACGGCATaGACAGGGCTGTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: TGSEGRSGQTGKKGFCCLNTQTA*TGLSRD
Trigger: GTCCCTGGACAGCCCTGTCCATGCCGTTTGTGTGTT...CAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp GGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCCATCCACGGAAGGGCTaGGCGATGTCATCTTCACTG +
Preference number: 4 (lower is better)
Translates to: GRSGQTGKKGFCCLDSPAHPRKG*AMSSSL
Trigger: CAGTGAAGATGACATCGCCCAGCCCTTCCGTGGATG...GGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCCATCCACGGAAGGGCTaGGCGATGTCATCTTCACTG +
Preference number: 4 (lower is better)
Translates to: RGSVGADREERVLLPGLSHPRKG*AMSSSL
Trigger: CAGTGAAGATGACATCGCCCAGCCCTTCCGTGGATG...GGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp GGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCGGGGCATACAGCTGGGGCCTTaGACATTCAGAGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: GFKLAAFAILLGPRVGRGIQLGP*TFRVIW
Trigger: CCAGATGACTCTGAATGTCCAAGGCCCCAGCTGTAT...GCCCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CCTACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCGGGTACTCTTTCCCTTaGACCTTGACAGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PTGSEGRSGQTGKKGFCCGYSFP*TLTGGD
Trigger: GTCCCCACCTGTCAAGGTCCAAGGGAAAGAGTACCC...GCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CCTACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCGACCTCTTGGGCTGCTaGTCAGAGGGGATGTTAGTC +
Preference number: 4 (lower is better)
Translates to: PTGSEGRSGQTGKKGFCCDLLGC*SEGMLV
Trigger: GACTAACATCCCCTCTGACCAGCAGCCCAAGAGGTC...GCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp AGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCGGGCAGGTCAGGGAAGTATaGCCTCGCAAAGGACCTCTT +
Preference number: 4 (lower is better)
Translates to: RGSSWRHLPSYWVRGSVGQVREV*PRKGPL
Trigger: AAGAGGTCCTTTGCGAGGCCATACTTCCCTGACCTG...CCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp CTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGAATACCAGGGCTCAGTaGGTACTTCATGGGGAACTC +
Preference number: 4 (lower is better)
Translates to: LGPRVGRGRQGRKGSVAWNTRAQ*VLHGEL
Trigger: GAGTTCCCCATGAAGTACTCACTGAGCCCTGGTATT...CCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp GGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCGGGGCCCATTAGACAGGAGCTaGTCTGCTCTAAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: GFKLAAFAILLGPRVGRGPLDRS*SALSSS
Trigger: TGATGAGCTTAGAGCAGATCAGCTCCTGTCTAATGG...GCCCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp CAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGACCATCCTCAGGCCTaGACCGCAGCCCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: QGRKGSVAWTLQPPLLGKDHPQA*TAALTQ
Trigger: CTGAGTGAGGGCTGCGGTGCAGGCCTGAGGATGGTC...TTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp CCTACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCATGCCACCTGGCTGTTaGTCTTCTCACTCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: PTGSEGRSGQTGKKGFCCMPPGC*SSHSAS
Trigger: CGAAGCTGAGTGAGAAGAGCAACAGCCAGGTGGCAT...GCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp CCATCCTACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGATGCCACCTGGCTGTTaGTCTTCTCACTCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: PSYWVRGSVGADREERVLMPPGC*SSHSAS
Trigger: CGAAGCTGAGTGAGAAGAGCAACAGCCAGGTGGCAT...CAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp AGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGTCCCAATGGAATCCATaGTGGCCACTTTATGGTCCT +
Preference number: 4 (lower is better)
Translates to: SWRHLPSYWVRGSVGADRSQWNP*WPLYGP
Trigger: AGGACCATAAAGTGGCCAGCATGGATTCCATTGGGA...CCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAAAGTCTCCTTCAAGTaGTTCCCGAGGAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: RGSVGADREERVLLPGLSKVSFK*FPRRAK
Trigger: CTTGGCCCTCCTCGGGAACCACTTGAAGGAGACTTT...GGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp ACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGAAAGTCTCCTTCAAGTaGTTCCCGAGGAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TGSEGRSGQTGKKGFCCLKVSFK*FPRRAK
Trigger: CTTGGCCCTCCTCGGGAACCACTTGAAGGAGACTTT...CAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp GGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCACCTCCAGAGGCACCTaGGTACAGGGAATGAAGACA +
Preference number: 4 (lower is better)
Translates to: GSVGADREERVLLPGLSSTSRGT*VQGMKT
Trigger: TGTCTTCATTCCCTGTACCCAGGTGCCTCTGGAGGT...GCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGTCCAAGCAGAACAGCTaGGGAATCTCGATGATGTCC +
Preference number: 4 (lower is better)
Translates to: LGPRVGRGRQGRKGSVAWSKQNS*GISMMS
Trigger: GGACATCATCGAGATTCCCCAGCTGTTCTGCTTGGA...CCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp GGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCCAGGTCAGGGAAGTATaGCCTCGCAAAGGACCTCTT +
Preference number: 4 (lower is better)
Translates to: GRSGQTGKKGFCCLDSPAQVREV*PRKGPL
Trigger: AAGAGGTCCTTTGCGAGGCCATACTTCCCTGACCTG...GGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp GGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCCATAGGGGTTCAAGCTaGCGGCATTTGCCATCCTAC +
Preference number: 4 (lower is better)
Translates to: GRSGQTGKKGFCCLDSPAHRGSS*RHLPSY
Trigger: GTAGGATGGCAAATGCCGCCAGCTTGAACCCCTATG...GGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp CAAAGAATCATGCTGTTGCATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCGGAATTGACGGGTCTTaGGACTCCTCCACCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QRIMLLHGDSGPSTLGQSGIDGS*DSSTRD
Trigger: GTCCCTGGTGGAGGAGTCTCAAGACCCGTCAATTCC...GCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGATTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp CCTACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCCACATCAGCAGGGTTaGAATTCACAAGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: PTGSEGRSGQTGKKGFCCPHQQG*NSQAGW
Trigger: CCATCCTGCTTGTGAATTGCAACCCTGCTGATGTGG...GCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTAAACACACAAACGGCATaGACAGGGCTGTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RGRQGRKGSVAWTLQPPLNTQTA*TGLSRD
Trigger: GTCCCTGGACAGCCCTGTCCATGCCGTTTGTGTGTT...TAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp GCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGTGAAGCACTGGCACTTCTaGGGGGCACACCCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: AWTLQPPLLGKESCCCMVKHWHF*GAHPLR
Trigger: TCTCAGCGGGTGTGCCCCCCAGAAGTGCCAGTGCTT...CACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp GCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGTGACAGGGGCCACCAGATaGTGGCGTCCTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: AWTLQPPLLGKESCCCMVTGATR*WRPPSQ
Trigger: CTGAGAAGGAGGACGCCACCATCTGGTGGCCCCTGT...CACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp GGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCTCTTCGACTCTTCCTTaGAGGTATGGAGGACTAGCC +
Preference number: 4 (lower is better)
Translates to: GRSGQTGKKGFCCLDSPASSTLP*RYGGLA
Trigger: GGCTAGTCCTCCATACCTCCAAGGAAGAGTCGAAGA...GGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGCAATGGAATCCATGCTaGCCACTTTATGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LGPRVGRGRQGRKGSVAWQWNPC*PLYGPQ
Trigger: CTGAGGACCATAAAGTGGCCAGCATGGATTCCATTG...CCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CCATCCTACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGCCATCAGGTTCCCAATaGAATCCATGCTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: PSYWVRGSVGADREERVLPSGSQ*NPCWPL
Trigger: AAGTGGCCAGCATGGATTCCATTGGGAACCTGATGG...CAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp AGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCGGGCCAGAAGTTGGTCGATaGTTTTGGCTTCCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: RGSSWRHLPSYWVRGSVGPEVGR*FWLPFH
Trigger: ATGGAAGGGAAGCCAAAACCATCGACCAACTTCTGG...CCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp AGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCGGGTCATCAGCCAGAAGTTaGTCGATGGTTTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RGSSWRHLPSYWVRGSVGSSARS*SMVLAS
Trigger: GGAAGCCAAAACCATCGACCAACTTCTGGCTGATGA...CCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
3UTR CAA 72 bp TCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTaGCATGGTGACAGTGGGCCATCCACGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SPASSTGQRIML*HGDSGPSTLGQ
Trigger: CTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp TTCCCCATAGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTGTAGGAGATGAGGCCTaGGAATTCGGCAGATGGGAA +
Preference number: 4 (lower is better)
Translates to: FPIGVQAGGICHPTGSEGVGDEA*EFGRWE
Trigger: TTCCCATCTGCCGAATTCTCAGGCCTCATCTCCTAC...ACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCTATGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp CCTACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCATGTCACGGTTCAGGTaGATGCACTTCTCCACGTAT +
Preference number: 4 (lower is better)
Translates to: PTGSEGRSGQTGKKGFCCMSRFR*MHFSTY
Trigger: ATACGTGGAGAAGTGCATTCACCTGAACCGTGACAT...GCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp GGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCATGTCACGGTTCAGGTaGATGCACTTCTCCACGTAT +
Preference number: 4 (lower is better)
Translates to: GRSGQTGKKGFCCLDSPAMSRFR*MHFSTY
Trigger: ATACGTGGAGAAGTGCATTCACCTGAACCGTGACAT...GGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp CAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGCTGGGGAATCTCGATaGTGTCCTGTTCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: QGRKGSVAWTLQPPLLGKAGESR*CPVPPG
Trigger: GCCTGGTGGAACAGGACATCATCGAGATTCCCCAGC...TTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp TGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGACCATCCTCAGGCCTaGACCGCAGCCCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: CCLDSPASSTGQRIMLLHDHPQA*TAALTQ
Trigger: CTGAGTGAGGGCTGCGGTGCAGGCCTGAGGATGGTC...ATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp CCATCCTACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTCCCAATGGAATCCATaGTGGCCACTTTATGGTCCT +
Preference number: 4 (lower is better)
Translates to: PSYWVRGSVGADREERVLSQWNP*WPLYGP
Trigger: AGGACCATAAAGTGGCCAGCATGGATTCCATTGGGA...CAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp GGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCGCAGGAAGCCCTTTTTaGCCTCATTCTTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: GRSGQTGKKGFCCLDSPAAGSPF*PHSCHL
Trigger: CAGATGACAAGAATGAGGGCAAAAAGGGCTTCCTGC...GGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp AGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCGGGAGACAGGAGCTGATCTaGTCTAAGCTCATCAAACAG +
Preference number: 4 (lower is better)
Translates to: RGSSWRHLPSYWVRGSVGRQELI*SKLIKQ
Trigger: CTGTTTGATGAGCTTAGAGCAGATCAGCTCCTGTCT...CCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp AGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCGGGAAAGAATCATGCTGTTaGATGGTGACAGTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: RGSSWRHLPSYWVRGSVGKESCC*MVTVGH
Trigger: ATGGCCCACTGTCACCATGCAACAGCATGATTCTTT...CCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp TTCCCCATAGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTAAGAAAGGGTTCTGTTaGCTGGACTCTCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: FPIGVQAGGICHPTGSEGKKGFC*LDSPAS
Trigger: GGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTT...ACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCTATGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp TACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTCAGAAATCACCGTGTTaGCCACATCGATCAAGACCC +
Preference number: 4 (lower is better)
Translates to: YWVRGSVGADREERVLLPQKSPC*PHRSRP
Trigger: GGGTCTTGATCGATGTGGCCAACACGGTGATTTCTG...AGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp TCATGCTGTTGCATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCTGGCAGCCCAACTCAAAGGTACTaGAGTTGTCTTTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SCCCMVTVGHPRWGRAGSPTQRY*SCLFGA
Trigger: GGCCCCAAAAAGACAACTCCAGTACCTTTGAGTTGG...GCTGCCAGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp GAAAGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATCCCGGCCCTCTGCGCTaGGGTAAAAGCTGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: ERVLLPGLSSLLYWAKNHPGPLR*GKSCCQ
Trigger: TTGGCAGCAGCTTTTACCCCAGCGCAGAGGGCCGGG...ATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp GCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGTGAGACCTCAATGCCAGTaGGGTACAGCACAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: AWTLQPPLLGKESCCCMVRPQCQ*GTAQLC
Trigger: GCACAGCTGTGCTGTACCTCACTGGCATTGAGGTCT...CACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp TGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGTGGAATTGACGGGTCTTaGGACTCCTCCACCAGGGAC +
Preference number: 4 (lower is better)
Translates to: CLDSPASSTGQRIMLLHGGIDGS*DSSTRD
Trigger: GTCCCTGGTGGAGGAGTCTCAAGACCCGTCAATTCC...ACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp AAAGAATCATGCTGTTGCATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCTCTTTCCCTTGGACCTTaGCAGGTGGGGACACCATCA +
Preference number: 4 (lower is better)
Translates to: KESCCCMVTVGHPRWGRALSLGP*QVGTPS
Trigger: TGATGGTGTCCCCACCTGTCAAGGTCCAAGGGAAAG...AGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGATTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp CATCCTACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTCCATTAGACAGGAGCTaGTCTGCTCTAAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: HPTGSEGRSGQTGKKGFCPLDRS*SALSSS
Trigger: TGATGAGCTTAGAGCAGATCAGCTCCTGTCTAATGG...ACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp GGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCGGGGCTCCACGTATTCATTCTaGTTCTTCAGGCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: GFKLAAFAILLGPRVGRGSTYSF*FFRLSS
Trigger: TGATGAAAGCCTGAAGAAGCAGAATGAATACGTGGA...GCCCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp CAAAGAATCATGCTGTTGCATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCAAGAAAGGGTTCTGTTaGCTGGACTCTCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: QRIMLLHGDSGPSTLGQSKKGFC*LDSPAS
Trigger: GGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTT...GCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGATTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp AGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTCAAGCTGGCGGCATTTaGCATCCTACTGGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: RVLLPGLSSLLYWAKNHAQAGGI*HPTGSE
Trigger: CTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTG...AGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTAATACAGCTGGGGCCTTaGACATTCAGAGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: RGRQGRKGSVAWTLQPPLIQLGP*TFRVIW
Trigger: CCAGATGACTCTGAATGTCCAAGGCCCCAGCTGTAT...TAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CCTACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCTCTTTAAGATACAGCTaGGGCCTTGGACATTCAGAG +
Preference number: 4 (lower is better)
Translates to: PTGSEGRSGQTGKKGFCCSLRYS*GLGHSE
Trigger: CTCTGAATGTCCAAGGCCCCAGCTGTATCTTAAAGA...GCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp ACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGTCTTCCTTGGAGGTATaGAGGACTAGCCGATATTTC +
Preference number: 4 (lower is better)
Translates to: TGSEGRSGQTGKKGFCCLSSLEV*RTSRYF
Trigger: GAAATATCGGCTAGTCCTCCATACCTCCAAGGAAGA...CAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp TGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGTACCTGCCCAGGCGGTTaGGGTCCTCATAGACAGATG +
Preference number: 4 (lower is better)
Translates to: CLDSPASSTGQRIMLLHGTCPGG*GPHRQM
Trigger: CATCTGTCTATGAGGACCCCAACCGCCTGGGCAGGT...ACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CATCCTACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTCAGTGAGTACTTCATaGGGAACTCATCGAGATCGG +
Preference number: 4 (lower is better)
Translates to: HPTGSEGRSGQTGKKGFCSVSTS*GTHRDR
Trigger: CCGATCTCGATGAGTTCCCCATGAAGTACTCACTGA...ACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp AGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTCAGGTCCCCTTGATTTaGGGCCCAAAAGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RVLLPGLSSLLYWAKNHAQVPLI*GPKGLG
Trigger: CCCCAAGCCTTTTGGGCCCCAAATCAAGGGGACCTG...AGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp GTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCACCCGGCGGATGTTaGCACAGGCACAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: VLLPGLSSLLYWAKNHAVAPGGC*HRHRCL
Trigger: GAGACATCTGTGCCTGTGCCAACATCCGCCGGGTGC...AACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp TACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTTCCAGCCTCCTCTACTaGGCAAAGAATCATGCTGTT +
Preference number: 4 (lower is better)
Translates to: YWVRGSVGADREERVLLPSSLLY*AKNHAV
Trigger: AACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGA...AGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp AGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTCCAGGGACAGGTGGATaGTACTCTGGAAGGACATGG +
Preference number: 4 (lower is better)
Translates to: RVLLPGLSSLLYWAKNHAPGTGG*YSGRTW
Trigger: CCATGTCCTTCCAGAGTATCATCCACCTGTCCCTGG...AGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp TTCCCCATAGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCCAAGCAGATTTCTGTaGCCAACACACAAACGGCAT +
Preference number: 4 (lower is better)
Translates to: FPIGVQAGGICHPTGSEGPSRFL*PTHKRH
Trigger: ATGCCGTTTGTGTGTTGGGCACAGAAATCTGCTTGG...ACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCTATGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp GTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGTGTCCACAAAACCCTaGAGCTGCAGCTCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: VLLPGLSSLLYWAKNHAVVSTKP*SCSSLH
Trigger: GTGCAGGGAGCTGCAGCTGCAGGGTTTTGTGGACAC...AACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp TACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTCACGGTTCAGGTGAATaGACTTCTCCACGTATTCAT +
Preference number: 4 (lower is better)
Translates to: YWVRGSVGADREERVLLPHGSGE*TSPRIH
Trigger: ATGAATACGTGGAGAAGTGCATTCACCTGAACCGTG...AGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp CAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGGATCCCCAGGTTCTTaGCCATCACAATCATCCGCA +
Preference number: 4 (lower is better)
Translates to: QGRKGSVAWTLQPPLLGKGSPGS*PSQSSA
Trigger: TGCGGATGATTGTGATGGGCAAGAACCTGGGGATCC...TTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp GCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGTGGGATCCCCAGGTTCTTaGCCATCACAATCATCCGCA +
Preference number: 4 (lower is better)
Translates to: AWTLQPPLLGKESCCCMVGSPGS*PSQSSA
Trigger: TGCGGATGATTGTGATGGGCAAGAACCTGGGGATCC...CACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp AGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTAATTCACAAGCAGGATaGCACCCCAACCGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: RVLLPGLSSLLYWAKNHANSQAG*HPNRWD
Trigger: GTCCCAGCGGTTGGGGTGCCATCCTGCTTGTGAATT...AGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAATTGTCCTCAAGTTGCTaGCCCACATCAGCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: QGRKGSVAWTLQPPLLGKLSSSC*PTSAGL
Trigger: CAACCCTGCTGATGTGGGCCAGCAACTTGAGGACAA...TTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp AGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGTTAGTAAACGTCACTTaGCTGAACACTTTTGCATCT +
Preference number: 4 (lower is better)
Translates to: SWRHLPSYWVRGSVGADRLVNVT*LNTFAS
Trigger: AGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAA...CCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp CAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGTCCTCATAGACAGATaGCACCTGGCTGTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: QGRKGSVAWTLQPPLLGKVLIDR*HLAVAL
Trigger: AAGAGCAACAGCCAGGTGGCATCTGTCTATGAGGAC...TTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp CACCCACCAGCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTCATCCTGGAGCCACCTaGCCAGGCGGTTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: HPPALYWLFSKRHLAEHFHPGAT*PGGWGP
Trigger: AGGACCCCAACCGCCTGGGCAGGTGGCTCCAGGATG...AAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp ATTCACACCCACCAGCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACGGAGGGTCTTACTCATaGCCCGGCCCTCTGCGCTGG +
Preference number: 4 (lower is better)
Translates to: IHTHQPFIGYLVNVTWLNGGSYS*PGPLRW
Trigger: CCAGCGCAGAGGGCCGGGCCATGAGTAAGACCCTCC...GTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTGTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CAAAGAATCATGCTGTTGCATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCTCATCAGCCAGAAGTTaGTCGATGGTTTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: QRIMLLHGDSGPSTLGQSSSARS*SMVLAS
Trigger: GGAAGCCAAAACCATCGACCAACTTCTGGCTGATGA...GCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGATTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp GAAAGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATACACAGAGTAGGAGATaGGGCCTGAGAATTCGGCAG +
Preference number: 4 (lower is better)
Translates to: ERVLLPGLSSLLYWAKNHTQSRR*GLRIRQ
Trigger: CTGCCGAATTCTCAGGCCTCATCTCCTACTCTGTGT...ATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp AGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTAATACCAGGGCTCAGTaGGTACTTCATGGGGAACTC +
Preference number: 4 (lower is better)
Translates to: RVLLPGLSSLLYWAKNHANTRAQ*VLHGEL
Trigger: GAGTTCCCCATGAAGTACTCACTGAGCCCTGGTATT...AGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp CGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTATTCGGCAGATGGGAATaGTATAGCTTCAACGTAGAA +
Preference number: 4 (lower is better)
Translates to: RGRQGRKGSVAWTLQPPLFGRWE*YSFNVE
Trigger: TTCTACGTTGAAGCTATAGCATTCCCATCTGCCGAA...TAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp AAAGAATCATGCTGTTGCATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCTCTGGGCAAAGAATCATaGTGTTGCATGGTGACAGTG +
Preference number: 4 (lower is better)
Translates to: KESCCCMVTVGHPRWGRALGKES*CCMVTV
Trigger: CACTGTCACCATGCAACAGCATGATTCTTTGCCCAG...AGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGATTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAATGTCATCTTCACTGTaGCGTACGTGGGATCAGACA +
Preference number: 4 (lower is better)
Translates to: QGRKGSVAWTLQPPLLGKMSSSL*RTWDQT
Trigger: TGTCTGATCCCACGTACGCCACAGTGAAGATGACAT...TTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp AAGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCCCAAGCAGATTTCTGTaGCCAACACACAAACGGCAT +
Preference number: 4 (lower is better)
Translates to: KGSVAWTLQPPLLGKESCPSRFL*PTHKRH
Trigger: ATGCCGTTTGTGTGTTGGGCACAGAAATCTGCTTGG...GCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp GCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGTGTCTCAACTTGCCCATTaGGGTAGATGTCTACCTCTA +
Preference number: 4 (lower is better)
Translates to: AWTLQPPLLGKESCCCMVSQLAH*GRCLPL
Trigger: TAGAGGTAGACATCTACCGCAATGGGCAAGTTGAGA...CACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp GTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGCAGGAAGCCCTTTTTaGCCTCATTCTTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: VAWTLQPPLLGKESCCCMAGSPF*PHSCHL
Trigger: CAGATGACAAGAATGAGGGCAAAAAGGGCTTCCTGC...CATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp GCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGTGAAAGAATCATGCTGTTaGATGGTGACAGTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: AWTLQPPLLGKESCCCMVKESCC*MVTVGH
Trigger: ATGGCCCACTGTCACCATGCAACAGCATGATTCTTT...CACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp AGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTCTGGGCAAAGAATCATaGTGTTGCATGGTGACAGTG +
Preference number: 4 (lower is better)
Translates to: RVLLPGLSSLLYWAKNHALGKES*CCMVTV
Trigger: CACTGTCACCATGCAACAGCATGATTCTTTGCCCAG...AGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp GAAAGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATTCTTCGACTCTTCCTTaGAGGTATGGAGGACTAGCC +
Preference number: 4 (lower is better)
Translates to: ERVLLPGLSSLLYWAKNHSSTLP*RYGGLA
Trigger: GGCTAGTCCTCCATACCTCCAAGGAAGAGTCGAAGA...ATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp AGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTTCAGTGAGTACTTCATaGGGAACTCATCGAGATCGG +
Preference number: 4 (lower is better)
Translates to: RVLLPGLSSLLYWAKNHASVSTS*GTHRDR
Trigger: CCGATCTCGATGAGTTCCCCATGAAGTACTCACTGA...AGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp TGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATCCATCAGGTTCCCAATaGAATCCATGCTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: CCLDSPASSTGQRIMLLHPSGSQ*NPCWPL
Trigger: AAGTGGCCAGCATGGATTCCATTGGGAACCTGATGG...ATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp TGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGTCCAGAAGTTGGTCGATaGTTTTGGCTTCCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: CLDSPASSTGQRIMLLHGPEVGR*FWLPFH
Trigger: ATGGAAGGGAAGCCAAAACCATCGACCAACTTCTGG...ACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp TGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGTTCCAGCCTCCTCTACTaGGCAAAGAATCATGCTGTT +
Preference number: 4 (lower is better)
Translates to: CLDSPASSTGQRIMLLHGSSLLY*AKNHAV
Trigger: AACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGA...ACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp CATTCACACCCACCAGCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACATGCTGTTGCATGGTaGCAGTGGGCCATCCACGCT +
Preference number: 4 (lower is better)
Translates to: HSHPPALYWLFSKRHLAEHAVAW*QWAIHA
Trigger: AGCGTGGATGGCCCACTGTCACCATGCAACAGCATG...TTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTGTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CACCCACCAGCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTGGGGCCACCAGATGGTaGCGTCCTCCTTCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: HPPALYWLFSKRHLAEHFGATRW*RPPSQK
Trigger: TTTCTGAGAAGGAGGACGCCACCATCTGGTGGCCCC...AAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp GTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTCCAACTCAAAGGTACTaGAGTTGTCTTTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: VLLPGLSSLLYWAKNHAVPTQRY*SCLFGA
Trigger: GGCCCCAAAAAGACAACTCCAGTACCTTTGAGTTGG...AACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp ATTCACACCCACCAGCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACCTGCCCAGGCGGTTaGGGTCCTCATAGACAGATG +
Preference number: 4 (lower is better)
Translates to: IHTHQPFIGYLVNVTWLNTCPGG*GPHRQM
Trigger: CATCTGTCTATGAGGACCCCAACCGCCTGGGCAGGT...GTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTGTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTTGCATCTTTTCCACGCTGGGGCAGAGCTaGCAGCTCCAGGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LYWLFSKRHLAEHFCIFSTLGQS*QLQGLG
Trigger: ACCCAGGCCCTGGAGCTGCCAGCTCTGCCCCAGCGT...GGAAAAGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTATTAGTAAACGTCACTTaGCTGAACACTTTTGCATCT +
Preference number: 4 (lower is better)
Translates to: RGRQGRKGSVAWTLQPPLLVNVT*LNTFAS
Trigger: AGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAA...TAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAACATTCAGAGTCATCTaGGACAGATTCGTTATTTCC +
Preference number: 4 (lower is better)
Translates to: QGRKGSVAWTLQPPLLGKTFRVI*DRFVIS
Trigger: GGAAATAACGAATCTGTCCCAGATGACTCTGAATGT...TTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp TGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATTCTTTAAGATACAGCTaGGGCCTTGGACATTCAGAG +
Preference number: 4 (lower is better)
Translates to: CCLDSPASSTGQRIMLLHSLRYS*GLGHSE
Trigger: CTCTGAATGTCCAAGGCCCCAGCTGTATCTTAAAGA...ATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CACCCACCAGCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTTTGGACCTTGACAGGTaGGGACACCATCAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: HPPALYWLFSKRHLAEHFLDLDR*GHHQVP
Trigger: GGGAACCTGATGGTGTCCCCACCTGTCAAGGTCCAA...AAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CACCCACCAGCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTGGGTACTCTTTCCCTTaGACCTTGACAGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: HPPALYWLFSKRHLAEHFGYSFP*TLTGGD
Trigger: GTCCCCACCTGTCAAGGTCCAAGGGAAAGAGTACCC...AAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp GCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTTGCATCTTTCCCGGCCCTCTGCGCTaGGGTAAAAGCTGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: ALYWLFSKRHLAEHFCIFPGPLR*GKSCCQ
Trigger: TTGGCAGCAGCTTTTACCCCAGCGCAGAGGGCCGGG...AAAGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp AAGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCACATTCAGAGTCATCTaGGACAGATTCGTTATTTCC +
Preference number: 4 (lower is better)
Translates to: KGSVAWTLQPPLLGKESCTFRVI*DRFVIS
Trigger: GGAAATAACGAATCTGTCCCAGATGACTCTGAATGT...GCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp GCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTTGCATCTTTCATTTGCCATCCTACTaGGTCCGAGGGTCGGTCGGG +
Preference number: 4 (lower is better)
Translates to: ALYWLFSKRHLAEHFCIFHLPSY*VRGSVG
Trigger: CCCGACCGACCCTCGGACCCAGTAGGATGGCAAATG...AAAGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CACCCACCAGCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTCATAGGGGTTCAAGCTaGCGGCATTTGCCATCCTAC +
Preference number: 4 (lower is better)
Translates to: HPPALYWLFSKRHLAEHFHRGSS*RHLPSY
Trigger: GTAGGATGGCAAATGCCGCCAGCTTGAACCCCTATG...AAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp CATTCACACCCACCAGCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAAGTCCTCATAGACAGATaGCACCTGGCTGTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: HSHPPALYWLFSKRHLAEVLIDR*HLAVAL
Trigger: AAGAGCAACAGCCAGGTGGCATCTGTCTATGAGGAC...TTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTGTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CACCCACCAGCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTCAGAAATCACCGTGTTaGCCACATCGATCAAGACCC +
Preference number: 4 (lower is better)
Translates to: HPPALYWLFSKRHLAEHFQKSPC*PHRSRP
Trigger: GGGTCTTGATCGATGTGGCCAACACGGTGATTTCTG...AAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTTGCATCTTTTACAGGGGCCACCAGATaGTGGCGTCCTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PFIGYLVNVTWLNTFASFTGATR*WRPPSQ
Trigger: CTGAGAAGGAGGACGCCACCATCTGGTGGCCCCTGT...AAAAGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CATTCACACCCACCAGCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAATCCAAGCAGAACAGCTaGGGAATCTCGATGATGTCC +
Preference number: 4 (lower is better)
Translates to: HSHPPALYWLFSKRHLAESKQNS*GISMMS
Trigger: GGACATCATCGAGATTCCCCAGCTGTTCTGCTTGGA...TTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTGTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTTGCATCTTTTGCACCCGGCGGATGTTaGCACAGGCACAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: PFIGYLVNVTWLNTFASFAPGGC*HRHRCL
Trigger: GAGACATCTGTGCCTGTGCCAACATCCGCCGGGTGC...AAAAGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp GCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTTGCATCTTTAATTCACAAGCAGGATaGCACCCCAACCGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ALYWLFSKRHLAEHFCIFNSQAG*HPNRWD
Trigger: GTCCCAGCGGTTGGGGTGCCATCCTGCTTGTGAATT...AAAGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp ATTCACACCCACCAGCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACCAATGGAATCCATGCTaGCCACTTTATGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: IHTHQPFIGYLVNVTWLNQWNPC*PLYGPQ
Trigger: CTGAGGACCATAAAGTGGCCAGCATGGATTCCATTG...GTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTGTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp CATTCACACCCACCAGCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAAAGACAGGAGCTGATCTaGTCTAAGCTCATCAAACAG +
Preference number: 4 (lower is better)
Translates to: HSHPPALYWLFSKRHLAERQELI*SKLIKQ
Trigger: CTGTTTGATGAGCTTAGAGCAGATCAGCTCCTGTCT...TTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTGTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp CATTCACACCCACCAGCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACGGTTCAGGTGAATaGACTTCTCCACGTATTCAT +
Preference number: 4 (lower is better)
Translates to: HSHPPALYWLFSKRHLAEHGSGE*TSPRIH
Trigger: ATGAATACGTGGAGAAGTGCATTCACCTGAACCGTG...TTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTGTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CACCCACCAGCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTTCTTCCTTGGAGGTATaGAGGACTAGCCGATATTTC +
Preference number: 4 (lower is better)
Translates to: HPPALYWLFSKRHLAEHFSSLEV*RTSRYF
Trigger: GAAATATCGGCTAGTCCTCCATACCTCCAAGGAAGA...AAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTTGCATCTTTTCCTTGGACCTTGACAGGTaGGGACACCATCAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LYWLFSKRHLAEHFCIFSLDLDR*GHHQVP
Trigger: GGGAACCTGATGGTGTCCCCACCTGTCAAGGTCCAA...GGAAAAGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR TCA 90 bp CTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTTGCATCTTTTCCACACAGAGTAGGAGATaGGGCCTGAGAATTCGGCAG +
Preference number: 4 (lower is better)
Translates to: LYWLFSKRHLAEHFCIFSTQSRR*GLRIRQ
Trigger: CTGCCGAATTCTCAGGCCTCATCTCCTACTCTGTGT...GGAAAAGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp GCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTTGCATCTTTCCACATCAGCAGGGTTaGAATTCACAAGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: ALYWLFSKRHLAEHFCIFPHQQG*NSQAGW
Trigger: CCATCCTGCTTGTGAATTGCAACCCTGCTGATGTGG...AAAGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp CTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTTGCATCTTTTCCTTGTCCTCAAGTTGCTaGCCCACATCAGCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LYWLFSKRHLAEHFCIFSLSSSC*PTSAGL
Trigger: CAACCCTGCTGATGTGGGCCAGCAACTTGAGGACAA...GGAAAAGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp TTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTTGCATCTTTTCCCACCTCCAGAGGCACCTaGGTACAGGGAATGAAGACA +
Preference number: 4 (lower is better)
Translates to: FIGYLVNVTWLNTFASFPTSRGT*VQGMKT
Trigger: TGTCTTCATTCCCTGTACCCAGGTGCCTCTGGAGGT...GGGAAAAGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CCA 90 bp TTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTTGCATCTTTTCCCATGTCATCTTCACTGTaGCGTACGTGGGATCAGACA +
Preference number: 4 (lower is better)
Translates to: FIGYLVNVTWLNTFASFPMSSSL*RTWDQT
Trigger: TGTCTGATCCCACGTACGCCACAGTGAAGATGACAT...GGGAAAAGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp CTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTTGCATCTTTTCCTTCGGCAGATGGGAATaGTATAGCTTCAACGTAGAA +
Preference number: 4 (lower is better)
Translates to: LYWLFSKRHLAEHFCIFSFGRWE*YSFNVE
Trigger: TTCTACGTTGAAGCTATAGCATTCCCATCTGCCGAA...GGAAAAGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR GCA 90 bp CCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTTGCATCTTTTTCCACGTATTCATTCTaGTTCTTCAGGCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: PFIGYLVNVTWLNTFASFSTYSF*FFRLSS
Trigger: TGATGAAAGCCTGAAGAAGCAGAATGAATACGTGGA...AAAAGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 90 bp CATCCACGGAAGGGCTGGGCGATGTCATCTTCACTGTGGCGTACGTaGGATCAGACAGGGGCCACCAGATGGTGGCGTCCTCCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: HPRKGWAMSSSLWRT*DQTGATRWWRPPSQ
Trigger: CTGAGAAGGAGGACGCCACCATCTGGTGGCCCCTGTCTGATCCCACGTACGCCACAGTGAAGATGACATCGCCCAGCCCTTCCGTGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 90 bp CCTTATCCGCATCCACGGAAGGGCTGGGCGATGTCATCTTCACTGTaGCGTACGTGGGATCAGACAGGGGCCACCAGATGGTGGCGTCCT +
Preference number: 5 (lower is better)
Translates to: PYPHPRKGWAMSSSL*RTWDQTGATRWWRP
Trigger: AGGACGCCACCATCTGGTGGCCCCTGTCTGATCCCACGTACGCCACAGTGAAGATGACATCGCCCAGCCCTTCCGTGGATGCGGATAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp AGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCGGGGATGCCACCTGGCTGTaGCTCTTCTCACTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RGSSWRHLPSYWVRGSVGDATWL*LFSLSF
Trigger: GAAGCTGAGTGAGAAGAGCAACAGCCAGGTGGCATC...CCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp TGTTGCATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCTGGCAGCTCCAGGTCTTTCCCTTGGACCTaGACAGGTGGGGACACCATC +
Preference number: 5 (lower is better)
Translates to: CCMVTVGHPRWGRAGSSRSFPWT*TGGDTI
Trigger: GATGGTGTCCCCACCTGTCAAGGTCCAAGGGAAAGA...CCTGGAGCTGCCAGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp GGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCTCAAGCTGGCGGCATTaGCCATCCTACTGGGTCCGA +
Preference number: 5 (lower is better)
Translates to: GRSGQTGKKGFCCLDSPASSWRH*PSYWVR
Trigger: TCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGA...GGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp CTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGACTGGAGTTGTCTTTTaGGGGCCAGTAGACTCTCGC +
Preference number: 5 (lower is better)
Translates to: LGPRVGRGRQGRKGSVAWTGVVF*GPVDSR
Trigger: GCGAGAGTCTACTGGCCCCAAAAAGACAACTCCAGT...CCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp GGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCGGGGCAACACCACCGTGTCTTaGTACAGCACAGTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: GFKLAAFAILLGPRVGRGNTTVS*YSTVSG
Trigger: TCCAGAGACTGTGCTGTACAAAGACACGGTGGTGTT...GCCCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS TCA 90 bp GGGCTCAGTGAGTACTTCATGGGGAACTCATCGAGATCGGCGGCCTaGGGTGTGTCGAGGATCAAGGACGTTGTCTTGTGGGGAGCCTGG +
Preference number: 5 (lower is better)
Translates to: GLSEYFMGNSSRSAA*GVSRIKDVVLWGAW
Trigger: CCAGGCTCCCCACAAGACAACGTCCTTGATCCTCGACACACCTCAGGCCGCCGATCTCGATGAGTTCCCCATGAAGTACTCACTGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 90 bp ATGCTGTTGCATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCTaGCAGCTCCAGGGCCTGGGTCTAAGGTACCATCTTCCACCATTT +
Preference number: 5 (lower is better)
Translates to: MLLHGDSGPSTLGQS*QLQGLGLRYHLPPF
Trigger: AAATGGTGGAAGATGGTACCTTAGACCCAGGCCCTGGAGCTGCCAGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp AGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCGGGTCAGAAATCACCGTGTaGGCCACATCGATCAAGACC +
Preference number: 5 (lower is better)
Translates to: RGSSWRHLPSYWVRGSVGSEITV*ATSIKT
Trigger: GGTCTTGATCGATGTGGCCAACACGGTGATTTCTGA...CCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp TCATGCTGTTGCATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCTGGCAGCCCCACATCAGCAGGGTaGCAATTCACAAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: SCCCMVTVGHPRWGRAGSPTSAG*QFTSRM
Trigger: CATCCTGCTTGTGAATTGCAACCCTGCTGATGTGGG...GCTGCCAGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp AGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGACTTTCTTGGTTTTCTaGTCCTCAAGTTGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: SWRHLPSYWVRGSVGADRTFLVF*SSSCWP
Trigger: GGGCCAGCAACTTGAGGACAAGAAAACCAAGAAAGT...CCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp TACTGGGTCCGAGGGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGATGCCACCTGGCTGTaGCTCTTCTCACTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: YWVRGSVGADREERVLLPDATWL*LFSLSF
Trigger: GAAGCTGAGTGAGAAGAGCAACAGCCAGGTGGCATC...AGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp GGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCGGGGCAGCAGGAAGCCCTTTTaGCCCTCATTCTTGTCATCT +
Preference number: 5 (lower is better)
Translates to: GFKLAAFAILLGPRVGRGSRKPF*PSFLSS
Trigger: AGATGACAAGAATGAGGGCAAAAAGGGCTTCCTGCT...GCCCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp GGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGTCGGGGCTTCATCAGCCAGAAGTaGGTCGATGGTTTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: GFKLAAFAILLGPRVGRGFISQK*VDGFGF
Trigger: GAAGCCAAAACCATCGACCAACTTCTGGCTGATGAA...GCCCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp TGTTGCATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCTGGCAGCTCCAGGAGTTGGTCGATGGTTTaGGCTTCCCTTCCATTAGAC +
Preference number: 5 (lower is better)
Translates to: CCMVTVGHPRWGRAGSSRSWSMV*ASLPLD
Trigger: GTCTAATGGAAGGGAAGCCAAAACCATCGACCAACT...CCTGGAGCTGCCAGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp TGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGTGGCACCCGGCGGATGTaGGCACAGGCACAGATGTCT +
Preference number: 5 (lower is better)
Translates to: CLDSPASSTGQRIMLLHGGTRRM*AQAQMS
Trigger: AGACATCTGTGCCTGTGCCAACATCCGCCGGGTGCC...ACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp CCCATAGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGCAAAGAATCATGCTGTaGCATGGTGACAGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: PIGVQAGGICHPTGSEGRQRIML*HGDSGP
Trigger: TGGCCCACTGTCACCATGCAACAGCATGATTCTTTG...CCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS GCA 90 bp TGCCCAGGCGGTTGGGGTCCTCATAGACAGATGCCACCTGGCTGTTaGTCTTCTCACTCAGCTTCGTCACTGTGTCCACAAAACCCTGCA +
Preference number: 5 (lower is better)
Translates to: CPGGWGPHRQMPPGC*SSHSASSLCPQNPA
Trigger: TGCAGGGTTTTGTGGACACAGTGACGAAGCTGAGTGAGAAGAGCAACAGCCAGGTGGCATCTGTCTATGAGGACCCCAACCGCCTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS GCA 90 bp CGCAACAGGTCAGGGAAGTATGGCCTCGCAAAGGACCTCTTGGGCTaGTGGTCAGAGGGGATGTTAGTCAGCTTCTCCAAGCAGAACAGC +
Preference number: 5 (lower is better)
Translates to: RNRSGKYGLAKDLLG*WSEGMLVSFSKQNS
Trigger: GCTGTTCTGCTTGGAGAAGCTGACTAACATCCCCTCTGACCAGCAGCCCAAGAGGTCCTTTGCGAGGCCATACTTCCCTGACCTGTTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 90 bp TCTTCACTGTGGCGTACGTGGGATCAGACAGGGGCCACCAGATGGTaGCGTCCTCCTTCTCAGAAATCACCGTGTTGGCCACATCGATCA +
Preference number: 5 (lower is better)
Translates to: SSLWRTWDQTGATRW*RPPSQKSPCWPHRS
Trigger: TGATCGATGTGGCCAACACGGTGATTTCTGAGAAGGAGGACGCCACCATCTGGTGGCCCCTGTCTGATCCCACGTACGCCACAGTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 90 bp TCATCTTCACTGTGGCGTACGTGGGATCAGACAGGGGCCACCAGATaGTGGCGTCCTCCTTCTCAGAAATCACCGTGTTGGCCACATCGA +
Preference number: 5 (lower is better)
Translates to: SSSLWRTWDQTGATR*WRPPSQKSPCWPHR
Trigger: TCGATGTGGCCAACACGGTGATTTCTGAGAAGGAGGACGCCACCATCTGGTGGCCCCTGTCTGATCCCACGTACGCCACAGTGAAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp TTCCCCATAGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCCCACATCAGCAGGGTaGCAATTCACAAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: FPIGVQAGGICHPTGSEGPTSAG*QFTSRM
Trigger: CATCCTGCTTGTGAATTGCAACCCTGCTGATGTGGG...ACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCTATGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp GGTCGGTCGGGGCAGACAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCACTTTCTTGGTTTTCTaGTCCTCAAGTTGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: GRSGQTGKKGFCCLDSPATFLVF*SSSCWP
Trigger: GGGCCAGCAACTTGAGGACAAGAAAACCAAGAAAGT...GGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp AAAGAATCATGCTGTTGCATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCTCGGGTACTCTTTCCCTaGGACCTTGACAGGTGGGGA +
Preference number: 5 (lower is better)
Translates to: KESCCCMVTVGHPRWGRARVLFP*DLDRWG
Trigger: TCCCCACCTGTCAAGGTCCAAGGGAAAGAGTACCCG...AGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGATTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp CCCATAGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTCGGAGCAGGAAGCCCTTTTaGCCCTCATTCTTGTCATCT +
Preference number: 5 (lower is better)
Translates to: PIGVQAGGICHPTGSEGRSRKPF*PSFLSS
Trigger: AGATGACAAGAATGAGGGCAAAAAGGGCTTCCTGCT...CCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp GCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGTGTCAAGCTGGCGGCATTaGCCATCCTACTGGGTCCGA +
Preference number: 5 (lower is better)
Translates to: AWTLQPPLLGKESCCCMVSSWRH*PSYWVR
Trigger: TCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGA...CACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 90 bp CCGCTGAGATCCAAGCAGATTTCTGTGCCCAACACACAAACGGCATaGACAGGGCTGTCCAGGGACAGGTGGATGATACTCTGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: PLRSKQISVPNTQTA*TGLSRDRWMILWKD
Trigger: GTCCTTCCAGAGTATCATCCACCTGTCCCTGGACAGCCCTGTCCATGCCGTTTGTGTGTTGGGCACAGAAATCTGCTTGGATCTCAGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 90 bp AACAGGTCAGGGAAGTATGGCCTCGCAAAGGACCTCTTGGGCTGCTaGTCAGAGGGGATGTTAGTCAGCTTCTCCAAGCAGAACAGCTGG +
Preference number: 5 (lower is better)
Translates to: NRSGKYGLAKDLLGC*SEGMLVSFSKQNSW
Trigger: CCAGCTGTTCTGCTTGGAGAAGCTGACTAACATCCCCTCTGACCAGCAGCCCAAGAGGTCCTTTGCGAGGCCATACTTCCCTGACCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp AAGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCCGGGTACTCTTTCCCTaGGACCTTGACAGGTGGGGA +
Preference number: 5 (lower is better)
Translates to: KGSVAWTLQPPLLGKESCRVLFP*DLDRWG
Trigger: TCCCCACCTGTCAAGGTCCAAGGGAAAGAGTACCCG...GCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp AAAGAATCATGCTGTTGCATGGTGACAGTGGGCCATCCACGCTGGGGCAGAGCTGATACAGCTGGGGCCTaGGACATTCAGAGTCATCTG +
Preference number: 5 (lower is better)
Translates to: KESCCCMVTVGHPRWGRADTAGA*DIQSHL
Trigger: CAGATGACTCTGAATGTCCAAGGCCCCAGCTGTATC...AGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGATTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp CAGGGAAGAAAGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGATACAGCTGGGGCCTaGGACATTCAGAGTCATCTG +
Preference number: 5 (lower is better)
Translates to: QGRKGSVAWTLQPPLLGKDTAGA*DIQSHL
Trigger: CAGATGACTCTGAATGTCCAAGGCCCCAGCTGTATC...TTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp TGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGTTCTTTCCCTTGGACCTaGACAGGTGGGGACACCATC +
Preference number: 5 (lower is better)
Translates to: CLDSPASSTGQRIMLLHGSFPWT*TGGDTI
Trigger: GATGGTGTCCCCACCTGTCAAGGTCCAAGGGAAAGA...ACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp TTCCCCATAGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTAGTTGGTCGATGGTTTaGGCTTCCCTTCCATTAGAC +
Preference number: 5 (lower is better)
Translates to: FPIGVQAGGICHPTGSEGSWSMV*ASLPLD
Trigger: GTCTAATGGAAGGGAAGCCAAAACCATCGACCAACT...ACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCTATGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp AAGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCACCATCTTCCACCATTaGAAGGCAAAGGGCACCCGG +
Preference number: 5 (lower is better)
Translates to: KGSVAWTLQPPLLGKESCTIFHH*KAKGTR
Trigger: CCGGGTGCCCTTTGCCTTCAAATGGTGGAAGATGGT...GCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp GTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGAAGAAAGGGTTCTGTaGCCTGGACTCTCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: VAWTLQPPLLGKESCCCMEERVL*PGLSSL
Trigger: GAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTC...CATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp TGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGTGAAGAAAGGGTTCTGTaGCCTGGACTCTCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: CLDSPASSTGQRIMLLHGEERVL*PGLSSL
Trigger: GAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTC...ACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp GCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGTGCAAAGAATCATGCTGTaGCATGGTGACAGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: AWTLQPPLLGKESCCCMVQRIML*HGDSGP
Trigger: TGGCCCACTGTCACCATGCAACAGCATGATTCTTTG...CACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp GTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGTCAGAAATCACCGTGTaGGCCACATCGATCAAGACC +
Preference number: 5 (lower is better)
Translates to: VAWTLQPPLLGKESCCCMSEITV*ATSIKT
Trigger: GGTCTTGATCGATGTGGCCAACACGGTGATTTCTGA...CATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp TGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGTTTCTTCGACTCTTCCTaGGAGGTATGGAGGACTAGC +
Preference number: 5 (lower is better)
Translates to: CLDSPASSTGQRIMLLHGFFDSS*EVWRTS
Trigger: GCTAGTCCTCCATACCTCCAAGGAAGAGTCGAAGAA...ACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp TGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATACTGGAGTTGTCTTTTaGGGGCCAGTAGACTCTCGC +
Preference number: 5 (lower is better)
Translates to: CCLDSPASSTGQRIMLLHTGVVF*GPVDSR
Trigger: GCGAGAGTCTACTGGCCCCAAAAAGACAACTCCAGT...ATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp AGGGTTCTGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTAACACCACCGTGTCTTaGTACAGCACAGTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: RVLLPGLSSLLYWAKNHANTTVS*YSTVSG
Trigger: TCCAGAGACTGTGCTGTACAAAGACACGGTGGTGTT...AGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp CACCCACCAGCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTCTCGCAAAGGACCTCTaGGGCTGCTGGTCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: HPPALYWLFSKRHLAEHFLAKDL*GCWSEG
Trigger: CCCCTCTGACCAGCAGCCCAAGAGGTCCTTTGCGAG...AAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp TGTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATTTCTTCGACTCTTCCTaGGAGGTATGGAGGACTAGC +
Preference number: 5 (lower is better)
Translates to: CCLDSPASSTGQRIMLLHFFDSS*EVWRTS
Trigger: GCTAGTCCTCCATACCTCCAAGGAAGAGTCGAAGAA...ATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp GTTGCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGTTCATCAGCCAGAAGTaGGTCGATGGTTTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: VAWTLQPPLLGKESCCCMFISQK*VDGFGF
Trigger: GAAGCCAAAACCATCGACCAACTTCTGGCTGATGAA...CATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp TTCCCCATAGGGGTTCAAGCTGGCGGCATTTGCCATCCTACTGGGTCCGAGGGTTTTAGTAAACGTCACTaGGCTGAACACTTTTGCATC +
Preference number: 5 (lower is better)
Translates to: FPIGVQAGGICHPTGSEGFSKRH*AEHFCI
Trigger: GATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAA...ACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCTATGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS TCA 90 bp GTCTTGAGACTCCTCCACCAGGGACACAGAGTAGGAGATGAGGCCTaGGAATTCGGCAGATGGGAATGCTATAGCTTCAACGTAGAAAGT +
Preference number: 5 (lower is better)
Translates to: VLRLLHQGHRVGDEA*EFGRWECYSFNVES
Trigger: ACTTTCTACGTTGAAGCTATAGCATTCCCATCTGCCGAATTCTCAGGCCTCATCTCCTACTCTGTGTCCCTGGTGGAGGAGTCTCAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 90 bp TCCTCTGAAAAGATCACTTTCTTGGTTTTCTTGTCCTCAAGTTGCTaGCCCACATCAGCAGGGTTGCAATTCACAAGCAGGATGGCACCC +
Preference number: 5 (lower is better)
Translates to: SSEKITFLVFLSSSC*PTSAGLQFTSRMAP
Trigger: GGGTGCCATCCTGCTTGTGAATTGCAACCCTGCTGATGTGGGCCAGCAACTTGAGGACAAGAAAACCAAGAAAGTGATCTTTTCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp GCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTTGCATCTTTCTCGCAAAGGACCTCTaGGGCTGCTGGTCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: ALYWLFSKRHLAEHFCIFLAKDL*GCWSEG
Trigger: CCCCTCTGACCAGCAGCCCAAGAGGTCCTTTGCGAG...AAAGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp GCCTGGACTCTCCAGCCTCCTCTACTGGGCAAAGAATCATGCTGTTGCATGGTGTTTAGTAAACGTCACTaGGCTGAACACTTTTGCATC +
Preference number: 5 (lower is better)
Translates to: AWTLQPPLLGKESCCCMVFSKRH*AEHFCI
Trigger: GATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAA...CACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 90 bp TGTCTTTTTGGGGCCAGTAGACTCTCGCCTTCTTCGACTCTTCCTTaGAGGTATGGAGGACTAGCCGATATTTCTTTAAGATACAGCTGG +
Preference number: 5 (lower is better)
Translates to: CLFGASRLSPSSTLP*RYGGLADISLRYSW
Trigger: CCAGCTGTATCTTAAAGAAATATCGGCTAGTCCTCCATACCTCCAAGGAAGAGTCGAAGAAGGCGAGAGTCTACTGGCCCCAAAAAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp ATTCACACCCACCAGCCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACTTTCTTGTCCTCAAGTaGCTGGCCCACATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: IHTHQPFIGYLVNVTWLNFLVLK*LAHISR
Trigger: CCTGCTGATGTGGGCCAGCAACTTGAGGACAAGAAA...GTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTGTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp CCCTTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTTGCATCTTTTGGCACCCGGCGGATGTaGGCACAGGCACAGATGTCT +
Preference number: 5 (lower is better)
Translates to: PFIGYLVNVTWLNTFASFGTRRM*AQAQMS
Trigger: AGACATCTGTGCCTGTGCCAACATCCGCCGGGTGCC...AAAAGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS GCA 90 bp ATTTCCTCTGAAAAGATCACTTTCTTGGTTTTCTTGTCCTCAAGTTaGTGGCCCACATCAGCAGGGTTGCAATTCACAAGCAGGATGGCA +
Preference number: 5 (lower is better)
Translates to: ISSEKITFLVFLSSS*WPTSAGLQFTSRMA
Trigger: TGCCATCCTGCTTGTGAATTGCAACCCTGCTGATGTGGGCCAGCAACTTGAGGACAAGAAAACCAAGAAAGTGATCTTTTCAGAGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 90 bp CCTTGGAGGTATGGAGGACTAGCCGATATTTCTTTAAGATACAGCTaGGGCCTTGGACATTCAGAGTCATCTGGGACAGATTCGTTATTT +
Preference number: 5 (lower is better)
Translates to: PWRYGGLADISLRYS*GLGHSESSGTDSLF
Trigger: AAATAACGAATCTGTCCCAGATGACTCTGAATGTCCAAGGCCCCAGCTGTATCTTAAAGAAATATCGGCTAGTCCTCCATACCTCCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS-3UTR CAA 90 bp TTTATTGGCTATTTAGTAAACGTCACTTGGCTGAACACTTTTGCATCTTTTCCCACCATCTTCCACCATTaGAAGGCAAAGGGCACCCGG +
Preference number: 5 (lower is better)
Translates to: FIGYLVNVTWLNTFASFPTIFHH*KAKGTR
Trigger: CCGGGTGCCCTTTGCCTTCAAATGGTGGAAGATGGT...GGGAAAAGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 72 bp GCTGGGCATAGAGGAAGTCTCGGAGGGTCTTACTCATaGCCCGGCCCTCTGCGCTGGGGTAAAAGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: AGHRGSLGGSYS*PGPLRWGKSCC
Trigger: GCAGCAGCTTTTACCCCAGCGCAGAGGGCCGGGCCATGAGTAAGACCCTCCGAGACTTCCTCTATGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 72 bp TGGACAGGGCTGTCCAGGGACAGGTGGATGATACTCTaGAAGGACATGGCTCGGCCCTCCACGCTGACCATC +
Preference number: 6 (lower is better)
Translates to: WTGLSRDRWMIL*KDMARPSTLTI
Trigger: GATGGTCAGCGTGGAGGGCCGAGCCATGTCCTTCCAGAGTATCATCCACCTGTCCCTGGACAGCCCTGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 72 bp AAGGGCTGGGCGATGTCATCTTCACTGTGGCGTACGTaGGATCAGACAGGGGCCACCAGATGGTGGCGTCCT +
Preference number: 6 (lower is better)
Translates to: KGWAMSSSLWRT*DQTGATRWWRP
Trigger: AGGACGCCACCATCTGGTGGCCCCTGTCTGATCCCACGTACGCCACAGTGAAGATGACATCGCCCAGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 72 bp CATCCACGGAAGGGCTGGGCGATGTCATCTTCACTGTaGCGTACGTGGGATCAGACAGGGGCCACCAGATGG +
Preference number: 6 (lower is better)
Translates to: HPRKGWAMSSSL*RTWDQTGATRW
Trigger: CCATCTGGTGGCCCCTGTCTGATCCCACGTACGCCACAGTGAAGATGACATCGCCCAGCCCTTCCGTGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 72 bp TGGCGTACGTGGGATCAGACAGGGGCCACCAGATGGTaGCGTCCTCCTTCTCAGAAATCACCGTGTTGGCCA +
Preference number: 6 (lower is better)
Translates to: WRTWDQTGATRW*RPPSQKSPCWP
Trigger: TGGCCAACACGGTGATTTCTGAGAAGGAGGACGCCACCATCTGGTGGCCCCTGTCTGATCCCACGTACGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 72 bp CTGTGGCGTACGTGGGATCAGACAGGGGCCACCAGATaGTGGCGTCCTCCTTCTCAGAAATCACCGTGTTGG +
Preference number: 6 (lower is better)
Translates to: LWRTWDQTGATR*WRPPSQKSPCW
Trigger: CCAACACGGTGATTTCTGAGAAGGAGGACGCCACCATCTGGTGGCCCCTGTCTGATCCCACGTACGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CAA 90 bp AGGGGCCACCAGATGGTGGCGTCCTCCTTCTCAGAAATCACCGTGTaGGCCACATCGATCAAGACCCTCCCAGAGCCATGGATGGTGAAG +
Preference number: 6 (lower is better)
Translates to: RGHQMVASSFSEITV*ATSIKTLPEPWMVK
Trigger: CTTCACCATCCATGGCTCTGGGAGGGTCTTGATCGATGTGGCCAACACGGTGATTTCTGAGAAGGAGGACGCCACCATCTGGTGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CAA 90 bp ACTCATCGAGATCGGCGGCCTGAGGTGTGTCGAGGATCAAGGACGTaGTCTTGTGGGGAGCCTGGGTGTAGCAGAAGGCCATCTCATCCT +
Preference number: 6 (lower is better)
Translates to: THRDRRPEVCRGSRT*SCGEPGCSRRPSHP
Trigger: AGGATGAGATGGCCTTCTGCTACACCCAGGCTCCCCACAAGACAACGTCCTTGATCCTCGACACACCTCAGGCCGCCGATCTCGATGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS GCA 72 bp TCTTGTCCTCAAGTTGCTGGCCCACATCAGCAGGGTTaGAATTCACAAGCAGGATGGCACCCCAACCGCTGG +
Preference number: 6 (lower is better)
Translates to: SCPQVAGPHQQG*NSQAGWHPNRW
Trigger: CCAGCGGTTGGGGTGCCATCCTGCTTGTGAATTGCAACCCTGCTGATGTGGGCCAGCAACTTGAGGACAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 72 bp GGGAAGTATGGCCTCGCAAAGGACCTCTTGGGCTGCTaGTCAGAGGGGATGTTAGTCAGCTTCTCCAAGCAG +
Preference number: 6 (lower is better)
Translates to: GKYGLAKDLLGC*SEGMLVSFSKQ
Trigger: CTGCTTGGAGAAGCTGACTAACATCCCCTCTGACCAGCAGCCCAAGAGGTCCTTTGCGAGGCCATACTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 72 bp GCCCATCACAATCATCCGCAACAGGTCAGGGAAGTATaGCCTCGCAAAGGACCTCTTGGGCTGCTGGTCAGA +
Preference number: 6 (lower is better)
Translates to: AHHNHPQQVREV*PRKGPLGLLVR
Trigger: TCTGACCAGCAGCCCAAGAGGTCCTTTGCGAGGCCATACTTCCCTGACCTGTTGCGGATGATTGTGATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CAA 72 bp CAGATGGTGGCGTCCTCCTTCTCAGAAATCACCGTGTaGGCCACATCGATCAAGACCCTCCCAGAGCCATGG +
Preference number: 6 (lower is better)
Translates to: QMVASSFSEITV*ATSIKTLPEPW
Trigger: CCATGGCTCTGGGAGGGTCTTGATCGATGTGGCCAACACGGTGATTTCTGAGAAGGAGGACGCCACCATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CAA 90 bp ATCATCCGCAACAGGTCAGGGAAGTATGGCCTCGCAAAGGACCTCTaGGGCTGCTGGTCAGAGGGGATGTTAGTCAGCTTCTCCAAGCAG +
Preference number: 6 (lower is better)
Translates to: IIRNRSGKYGLAKDL*GCWSEGMLVSFSKQ
Trigger: CTGCTTGGAGAAGCTGACTAACATCCCCTCTGACCAGCAGCCCAAGAGGTCCTTTGCGAGGCCATACTTCCCTGACCTGTTGCGGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS TCA 72 bp GAGTACTTCATGGGGAACTCATCGAGATCGGCGGCCTaGGGTGTGTCGAGGATCAAGGACGTTGTCTTGTGG +
Preference number: 6 (lower is better)
Translates to: EYFMGNSSRSAA*GVSRIKDVVLW
Trigger: CCACAAGACAACGTCCTTGATCCTCGACACACCTCAGGCCGCCGATCTCGATGAGTTCCCCATGAAGTACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS GCA 72 bp TCAGGGAAGTATGGCCTCGCAAAGGACCTCTTGGGCTaGTGGTCAGAGGGGATGTTAGTCAGCTTCTCCAAG +
Preference number: 6 (lower is better)
Translates to: SGKYGLAKDLLG*WSEGMLVSFSK
Trigger: CTTGGAGAAGCTGACTAACATCCCCTCTGACCAGCAGCCCAAGAGGTCCTTTGCGAGGCCATACTTCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 72 bp AGATGGTGGCGTCCTCCTTCTCAGAAATCACCGTGTTaGCCACATCGATCAAGACCCTCCCAGAGCCATGGA +
Preference number: 6 (lower is better)
Translates to: RWWRPPSQKSPC*PHRSRPSQSHG
Trigger: TCCATGGCTCTGGGAGGGTCTTGATCGATGTGGCCAACACGGTGATTTCTGAGAAGGAGGACGCCACCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 72 bp GAGGGGATGTTAGTCAGCTTCTCCAAGCAGAACAGCTaGGGAATCTCGATGATGTCCTGTTCCACCAGGCCC +
Preference number: 6 (lower is better)
Translates to: EGMLVSFSKQNS*GISMMSCSTRP
Trigger: GGGCCTGGTGGAACAGGACATCATCGAGATTCCCCAGCTGTTCTGCTTGGAGAAGCTGACTAACATCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CAA 72 bp TTCTTGTCCTCAAGTTGCTGGCCCACATCAGCAGGGTaGCAATTCACAAGCAGGATGGCACCCCAACCGCTG +
Preference number: 6 (lower is better)
Translates to: FLSSSCWPTSAG*QFTSRMAPQPL
Trigger: CAGCGGTTGGGGTGCCATCCTGCTTGTGAATTGCAACCCTGCTGATGTGGGCCAGCAACTTGAGGACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CAA 72 bp AACAGGTCAGGGAAGTATGGCCTCGCAAAGGACCTCTaGGGCTGCTGGTCAGAGGGGATGTTAGTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: NRSGKYGLAKDL*GCWSEGMLVSF
Trigger: GAAGCTGACTAACATCCCCTCTGACCAGCAGCCCAAGAGGTCCTTTGCGAGGCCATACTTCCCTGACCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS GCA 72 bp GGTTGGGGTCCTCATAGACAGATGCCACCTGGCTGTTaGTCTTCTCACTCAGCTTCGTCACTGTGTCCACAA +
Preference number: 6 (lower is better)
Translates to: GWGPHRQMPPGC*SSHSASSLCPQ
Trigger: TTGTGGACACAGTGACGAAGCTGAGTGAGAAGAGCAACAGCCAGGTGGCATCTGTCTATGAGGACCCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS GCA 72 bp CAGGTGGGGACACCATCAGGTTCCCAATGGAATCCATaGTGGCCACTTTATGGTCCTCAGTGTCCTGGATCA +
Preference number: 6 (lower is better)
Translates to: QVGTPSGSQWNP*WPLYGPQCPGS
Trigger: TGATCCAGGACACTGAGGACCATAAAGTGGCCAGCATGGATTCCATTGGGAACCTGATGGTGTCCCCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 72 bp TCCAAGCAGATTTCTGTGCCCAACACACAAACGGCATaGACAGGGCTGTCCAGGGACAGGTGGATGATACTC +
Preference number: 6 (lower is better)
Translates to: SKQISVPNTQTA*TGLSRDRWMIL
Trigger: GAGTATCATCCACCTGTCCCTGGACAGCCCTGTCCATGCCGTTTGTGTGTTGGGCACAGAAATCTGCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 72 bp TCATGTAGCCAATACCAGGGCTCAGTGAGTACTTCATaGGGAACTCATCGAGATCGGCGGCCTGAGGTGTGT +
Preference number: 6 (lower is better)
Translates to: SCSQYQGSVSTS*GTHRDRRPEVC
Trigger: ACACACCTCAGGCCGCCGATCTCGATGAGTTCCCCATGAAGTACTCACTGAGCCCTGGTATTGGCTACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS TCA 72 bp CTCCTCCACCAGGGACACAGAGTAGGAGATGAGGCCTaGGAATTCGGCAGATGGGAATGCTATAGCTTCAAC +
Preference number: 6 (lower is better)
Translates to: LLHQGHRVGDEA*EFGRWECYSFN
Trigger: GTTGAAGCTATAGCATTCCCATCTGCCGAATTCTCAGGCCTCATCTCCTACTCTGTGTCCCTGGTGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 72 bp GTGGGGACACCATCAGGTTCCCAATGGAATCCATGCTaGCCACTTTATGGTCCTCAGTGTCCTGGATCATGT +
Preference number: 6 (lower is better)
Translates to: VGTPSGSQWNPC*PLYGPQCPGSC
Trigger: ACATGATCCAGGACACTGAGGACCATAAAGTGGCCAGCATGGATTCCATTGGGAACCTGATGGTGTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 72 bp GGGGCCAGTAGACTCTCGCCTTCTTCGACTCTTCCTTaGAGGTATGGAGGACTAGCCGATATTTCTTTAAGA +
Preference number: 6 (lower is better)
Translates to: GASRLSPSSTLP*RYGGLADISLR
Trigger: TCTTAAAGAAATATCGGCTAGTCCTCCATACCTCCAAGGAAGAGTCGAAGAAGGCGAGAGTCTACTGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS GCA 72 bp GGTTTTGGCTTCCCTTCCATTAGACAGGAGCTGATCTaGTCTAAGCTCATCAAACAGAAGAGCGTCGCCATA +
Preference number: 6 (lower is better)
Translates to: GFGFPSIRQELI*SKLIKQKSVAI
Trigger: TATGGCGACGCTCTTCTGTTTGATGAGCTTAGAGCAGATCAGCTCCTGTCTAATGGAAGGGAAGCCAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 72 bp AAGATCACTTTCTTGGTTTTCTTGTCCTCAAGTTGCTaGCCCACATCAGCAGGGTTGCAATTCACAAGCAGG +
Preference number: 6 (lower is better)
Translates to: KITFLVFLSSSC*PTSAGLQFTSR
Trigger: CCTGCTTGTGAATTGCAACCCTGCTGATGTGGGCCAGCAACTTGAGGACAAGAAAACCAAGAAAGTGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 72 bp TCATTCTGCTTCTTCAGGCTTTCATCAGCCAGAAGTTaGTCGATGGTTTTGGCTTCCCTTCCATTAGACAGG +
Preference number: 6 (lower is better)
Translates to: SFCFFRLSSARS*SMVLASLPLDR
Trigger: CCTGTCTAATGGAAGGGAAGCCAAAACCATCGACCAACTTCTGGCTGATGAAAGCCTGAAGAAGCAGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CCA 72 bp TATGGAGGACTAGCCGATATTTCTTTAAGATACAGCTaGGGCCTTGGACATTCAGAGTCATCTGGGACAGAT +
Preference number: 6 (lower is better)
Translates to: YGGLADISLRYS*GLGHSESSGTD
Trigger: ATCTGTCCCAGATGACTCTGAATGTCCAAGGCCCCAGCTGTATCTTAAAGAAATATCGGCTAGTCCTCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CAA 72 bp TTCATTCTGCTTCTTCAGGCTTTCATCAGCCAGAAGTaGGTCGATGGTTTTGGCTTCCCTTCCATTAGACAG +
Preference number: 6 (lower is better)
Translates to: FILLLQAFISQK*VDGFGFPSIRQ
Trigger: CTGTCTAATGGAAGGGAAGCCAAAACCATCGACCAACTTCTGGCTGATGAAAGCCTGAAGAAGCAGAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1
CDS CAA 90 bp GACAGATTCGTTATTTCCTCTGAAAAGATCACTTTCTTGGTTTTCTaGTCCTCAAGTTGCTGGCCCACATCAGCAGGGTTGCAATTCACA +
Preference number: 6 (lower is better)
Translates to: DRFVISSEKITFLVF*SSSCWPTSAGLQFT
Trigger: TGTGAATTGCAACCCTGCTGATGTGGGCCAGCAACTTGAGGACAAGAAAACCAAGAAAGTGATCTTTTCAGAGGAAATAACGAATCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619609.1
ENST00000625380.1