RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PADI2 (Homo sapiens)

Ensembl gene IDs: ENSG00000117115

Ensembl transcript IDs: ENST00000375481.1, ENST00000375486.9, ENST00000466151.1, ENST00000479534.5

Found 338 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGCGGGGCTGTCCAGTCCATGTCAGCAGAAGGCTCTGGGCGTGTaGGGGAGGGTCTGGAGAACTAAGCGAAGGAGGCAAACGCCAGGG +
Preference number: 1 (lower is better)
Translates to: PAGLSSPCQQKALGV*GRVWRTKRRRQTPG
Trigger: CCCTGGCGTTTGCCTCCTTCGCTTAGTTCTCCAGACCCTCCCTCACACGCCCAGAGCCTTCTGCTGACATGGACTGGACAGCCCCGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CCA 90 bp GACACTGGCCCAGCTATTTTCAGCAGGGACAGAGTCGAGGCTCACTaGGGATGGCTTCAGAGGACACTGAGGCCCCTCTCAGGGAGGGCA +
Preference number: 1 (lower is better)
Translates to: DTGPAIFSRDRVEAH*GWLQRTLRPLSGRA
Trigger: TGCCCTCCCTGAGAGGGGCCTCAGTGTCCTCTGAAGCCATCCCCAGTGAGCCTCGACTCTGTCCCTGCTGAAAATAGCTGGGCCAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CCA 90 bp AAGGTCTCCCAGCGGGGCTGTCCAGTCCATGTCAGCAGAAGGCTCTaGGCGTGTGAGGGAGGGTCTGGAGAACTAAGCGAAGGAGGCAAA +
Preference number: 1 (lower is better)
Translates to: KVSQRGCPVHVSRRL*ACEGGSGELSEGGK
Trigger: TTTGCCTCCTTCGCTTAGTTCTCCAGACCCTCCCTCACACGCCCAGAGCCTTCTGCTGACATGGACTGGACAGCCCCGCTGGGAGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR GCA 90 bp AGGGGCTGGTCACTTATTATGCCCCTGGGAAGGCCTGAATCTGGCTaGTGGCGAACAAGTTCTTGTCTAGCTGCCTGGACAGATGGCACC +
Preference number: 1 (lower is better)
Translates to: RGWSLIMPLGRPESG*WRTSSCLAAWTDGT
Trigger: GGTGCCATCTGTCCAGGCAGCTAGACAAGAACTTGTTCGCCAGCAGCCAGATTCAGGCCTTCCCAGGGGCATAATAAGTGACCAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CCA 90 bp GGCTGGTCACTTATTATGCCCCTGGGAAGGCCTGAATCTGGCTGCTaGCGAACAAGTTCTTGTCTAGCTGCCTGGACAGATGGCACCAGG +
Preference number: 1 (lower is better)
Translates to: GWSLIMPLGRPESGC*RTSSCLAAWTDGTR
Trigger: CCTGGTGCCATCTGTCCAGGCAGCTAGACAAGAACTTGTTCGCCAGCAGCCAGATTCAGGCCTTCCCAGGGGCATAATAAGTGACCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CCA 90 bp AAACCACCCCTAAGTTGGCAGCTGACCCAGAACTGGCTGTTGGGCTaGAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCCGGA +
Preference number: 1 (lower is better)
Translates to: KPPLSWQLTQNWLLG*RVGQGPYVLDLMSG
Trigger: TCCGGACATCAGATCCAACACATAAGGACCCTGGCCTACCCTCCAGCCCAACAGCCAGTTCTGGGTCAGCTGCCAACTTAGGGGTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR TCA 90 bp ATTGGGGGTGGCCACCTGGAAACCCTGAGGGAGATGTATTTGAAATaGCGATGGCAGTTCAAGATACGTCTAGGGTCCCGGGGTCCTGGG +
Preference number: 1 (lower is better)
Translates to: IGGGHLETLREMYLK*RWQFKIRLGSRGPG
Trigger: CCCAGGACCCCGGGACCCTAGACGTATCTTGAACTGCCATCGTCATTTCAAATACATCTCCCTCAGGGTTTCCAGGTGGCCACCCCCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CCA 90 bp GGGCATCTTTACGCATTGAACTCTCAGGTCACAAGTATGCTGGTCTaGGGAGAAATCCCCATGCATGCGGGGGAGCCTGCATCCCTGAGA +
Preference number: 1 (lower is better)
Translates to: GHLYALNSQVTSMLV*GEIPMHAGEPASLR
Trigger: TCTCAGGGATGCAGGCTCCCCCGCATGCATGGGGATTTCTCCCCAGACCAGCATACTTGTGACCTGAGAGTTCAATGCGTAAAGATGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR GCA 90 bp TGTGTTGGATCTGATGTCCGGAGAGGAGGGGCTGGTCACTTATTATaGCCCTGGGAAGGCCTGAATCTGGCTGCTGGCGAACAAGTTCTT +
Preference number: 1 (lower is better)
Translates to: CVGSDVRRGGAGHLL*PWEGLNLAAGEQVL
Trigger: AAGAACTTGTTCGCCAGCAGCCAGATTCAGGCCTTCCCAGGGGCATAATAAGTGACCAGCCCCTCCTCTCCGGACATCAGATCCAACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CCA 90 bp GTGTTTTGTTGTGTTCTGTTCCTTATGTCAGGGCTACAGAGACACTaGCCCAGCTATTTTCAGCAGGGACAGAGTCGAGGCTCACTGGGG +
Preference number: 1 (lower is better)
Translates to: VFCCVLFLMSGLQRH*PSYFQQGQSRGSLG
Trigger: CCCCAGTGAGCCTCGACTCTGTCCCTGCTGAAAATAGCTGGGCCAGTGTCTCTGTAGCCCTGACATAAGGAACAGAACACAACAAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CCA 90 bp TGTTTCCAGGAAGGTTCTAAGCTAACTTACTGGACCCTCAGGGAGTaGGGAGGACTAGCCAACAGTGTCCACACTGCAGAGAGAAAGCCA +
Preference number: 1 (lower is better)
Translates to: CFQEGSKLTYWTLRE*GGLANSVHTAERKP
Trigger: TGGCTTTCTCTCTGCAGTGTGGACACTGTTGGCTAGTCCTCCCCACTCCCTGAGGGTCCAGTAAGTTAGCTTAGAACCTTCCTGGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CCA 90 bp CCTGCTCAGATGAAATGTTTCCAGGAAGGTTCTAAGCTAACTTACTaGACCCTCAGGGAGTGGGGAGGACTAGCCAACAGTGTCCACACT +
Preference number: 1 (lower is better)
Translates to: PAQMKCFQEGSKLTY*TLREWGGLANSVHT
Trigger: AGTGTGGACACTGTTGGCTAGTCCTCCCCACTCCCTGAGGGTCCAGTAAGTTAGCTTAGAACCTTCCTGGAAACATTTCATCTGAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR TCA 90 bp AGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTaGCCAGGGGCATCTTTACGCATTGAACTCTCAGGTCACAAGTAT +
Preference number: 1 (lower is better)
Translates to: SGQRIKDQAREDGYG*PGASLRIELSGHKY
Trigger: ATACTTGTGACCTGAGAGTTCAATGCGTAAAGATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CCA 90 bp TGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATTTCAATaGGATAATCAAACCACCCCTAAGTTGGCAGCTGACCCAGAACTG +
Preference number: 1 (lower is better)
Translates to: CPNERVFGKGTGEFQ*DNQTTPKLAADPEL
Trigger: CAGTTCTGGGTCAGCTGCCAACTTAGGGGTGGTTTGATTATCCCATTGAAATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR TCA 90 bp GAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCCGGAGAGGAGGGGCTGGCTTCAGAGGACACTaGGGCCCCTCTCAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: EGRPGSLCVGSDVRRGGAGFRGH*GPSQGG
Trigger: CCCTCCCTGAGAGGGGCCTCAGTGTCCTCTGAAGCC...AGCCCCTCCTCTCCGGACATCAGATCCAACACATAAGGACCCTGGCCTACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR TCA 90 bp AAGGAGGAAGGTCAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGAAGGCTCTGGGCGTGTaGGGGAGGGTCTGGAGAACT +
Preference number: 2 (lower is better)
Translates to: KEEGQGAARESRTRQEKMKALGV*GRVWRT
Trigger: AGTTCTCCAGACCCTCCCTCACACGCCCAGAGCCTT...CATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTGACCTTCCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CAA 90 bp CAGAACTGGCTGTTGGGCTGGAGGGTAGGCCAGGGTCCTTATGTGTaGGATCTGATGTCCGGAGAGGAGGGGCTGGTCACTTATTATGCC +
Preference number: 2 (lower is better)
Translates to: QNWLLGWRVGQGPYV*DLMSGEEGLVTYYA
Trigger: GGCATAATAAGTGACCAGCCCCTCCTCTCCGGACATCAGATCCAACACATAAGGACCCTGGCCTACCCTCCAGCCCAACAGCCAGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR GCA 90 bp GATGGGTTCCATGCCAGTAGGGACCAGGTCCAGACTGCTACTAACCACTGTGTTGCATGCGGGGGAGCCTaGATCCCTGAGACAGATGAG +
Preference number: 2 (lower is better)
Translates to: DGFHASRDQVQTATNHCVACGGA*IPETDE
Trigger: CTCATCTGTCTCAGGGATGCAGGCTCCCCCGCATGC...AACACAGTGGTTAGTAGCAGTCTGGACCTGGTCCCTACTGGCATGGAACCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CCA 90 bp CAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACAGAGTCGAGGCTCACTaGGGATGGCTTCAGAGGACA +
Preference number: 2 (lower is better)
Translates to: QGAARESRTRQEKMDMADRVEAH*GWLQRT
Trigger: TGTCCTCTGAAGCCATCCCCAGTGAGCCTCGACTCT...GTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CCA 90 bp CATGAGTCCACGGGGGTATATCCACACCGAGGGTTGTCACACTGGGTGGGCAAGCTTTGGGGAGCAGTTTaGGCACATGGTTTGCTGTGT +
Preference number: 2 (lower is better)
Translates to: HESTGVYPHRGLSHWVGKLWGAV*AHGLLC
Trigger: ACACAGCAAACCATGTGCCCAAACTGCTCCCCAAAG...CTTGCCCACCCAGTGTGACAACCCTCGGTGTGGATATACCCCCGTGGACTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR TCA 90 bp GAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGCCACTCCAAAAGAGAAACAGTaGCTTCCCCACTCCCACAGC +
Preference number: 2 (lower is better)
Translates to: ECRPLNRKSWEGIIPPATPKEKQ*LPHSHS
Trigger: GCTGTGGGAGTGGGGAAGTCACTGTTTCTCTTTTGG...AGTGGCTGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375481.1
3UTR-3UTR GCA 90 bp CTGGCTGTTGGGCTGGAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCAGGCCTGAATCTGGCTaGTGGCGAACAAGTTCTTGT +
Preference number: 2 (lower is better)
Translates to: LAVGLEGRPGSLCVGSDVRPESG*WRTSSC
Trigger: ACAAGAACTTGTTCGCCAGCAGCCAGATTCAGGCCT...GACATCAGATCCAACACATAAGGACCCTGGCCTACCCTCCAGCCCAACAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CCA 90 bp CCAGGGAATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGAGGGTCCCGGGGTCCTaGGGTCCCTTTCCATGGATT +
Preference number: 2 (lower is better)
Translates to: PGNESGYVQMRGSLAKALRVPGS*GPFPWI
Trigger: AATCCATGGAAAGGGACCCCAGGACCCCGGGACCCT...CAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CCA 90 bp GATGGGTTCCATGCCAGTAGGGACCAGGTCCAGACTGCTACTAACCACTGTGTTCCAGGCAAGAGAAGATaGATATGGCTGACCAGGGGC +
Preference number: 2 (lower is better)
Translates to: DGFHASRDQVQTATNHCVPGKRR*IWLTRG
Trigger: GCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGG...AACACAGTGGTTAGTAGCAGTCTGGACCTGGTCCCTACTGGCATGGAACCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR TCA 90 bp CAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACGAGGTTGGTAAGGAATaGATAATTGGGGGTGGCCAC +
Preference number: 2 (lower is better)
Translates to: QGAARESRTRQEKMDMADEVGKE*IIGGGH
Trigger: GTGGCCACCCCCAATTATTCATTCCTTACCAACCTC...GTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CAA 90 bp AAAGGCACTGGTGAATTTCAATGGGATAATCAAACCACCCCTAAGTaGGCAGCTGACCCAGAACTGGCTGTTGGGCTGGAGGGTAGGCCA +
Preference number: 2 (lower is better)
Translates to: KGTGEFQWDNQTTPK*AADPELAVGLEGRP
Trigger: TGGCCTACCCTCCAGCCCAACAGCCAGTTCTGGGTCAGCTGCCAACTTAGGGGTGGTTTGATTATCCCATTGAAATTCACCAGTGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR TCA 90 bp CCAGGGAATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGCTTATGTGTTGGATCTaGTGTCCGGAGAGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: PGNESGYVQMRGSLAKALLMCWI*CPERRG
Trigger: GCCCCTCCTCTCCGGACATCAGATCCAACACATAAG...CAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATTCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CCA 90 bp CATGAGTCCACGGGGGTATATCCACACCGAGGGTTGTCACACTGGGTGGGCAAGAGCAGTTTGGGCACATaGTTTGCTGTGTTTTGTTGT +
Preference number: 2 (lower is better)
Translates to: HESTGVYPHRGLSHWVGKSSLGT*FAVFCC
Trigger: ACAACAAAACACAGCAAACCATGTGCCCAAACTGCT...CTTGCCCACCCAGTGTGACAACCCTCGGTGTGGATATACCCCCGTGGACTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CCA 90 bp CCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCATGAATAATTGGGGGTaGCCACCTGGAAACCCTGAG +
Preference number: 2 (lower is better)
Translates to: PENQGPGKRRWIWLTRGIMNNWG*PPGNPE
Trigger: CTCAGGGTTTCCAGGTGGCCACCCCCAATTATTCAT...GATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CCA 90 bp GATGGGTTCCATGCCAGTAGGGACCAGGTCCAGACTGCTACTAACCACTGTGTTAGGTCACAAGTATGCTaGTCTGGGGAGAAATCCCCA +
Preference number: 2 (lower is better)
Translates to: DGFHASRDQVQTATNHCVRSQVC*SGEKSP
Trigger: TGGGGATTTCTCCCCAGACCAGCATACTTGTGACCT...AACACAGTGGTTAGTAGCAGTCTGGACCTGGTCCCTACTGGCATGGAACCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CAA 90 bp AGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCTTTACGCATaGAACTCTCAGGTCACAAGTATGCTGGTCTGGGGAGAAATCCCC +
Preference number: 2 (lower is better)
Translates to: RQEKMDMADQGHLYA*NSQVTSMLVWGEIP
Trigger: GGGGATTTCTCCCCAGACCAGCATACTTGTGACCTGAGAGTTCAATGCGTAAAGATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR TCA 90 bp GATGGGTTCCATGCCAGTAGGGACCAGGTCCAGACTGCTACTAACCACTGTGTTGTTGGAGCCAGGGAATaGATCTGGGTATGTCCAAAT +
Preference number: 2 (lower is better)
Translates to: DGFHASRDQVQTATNHCVVGARE*IWVCPN
Trigger: ATTTGGACATACCCAGATTCATTCCCTGGCTCCAAC...AACACAGTGGTTAGTAGCAGTCTGGACCTGGTCCCTACTGGCATGGAACCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR GCA 90 bp CCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCTTTTCAGAGCATGGCTaGTGGAAGAACTGGCAATCC +
Preference number: 2 (lower is better)
Translates to: PENQGPGKRRWIWLTRGIFSEHG*WKNWQS
Trigger: GGATTGCCAGTTCTTCCAGCAGCCATGCTCTGAAAA...GATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR GCA 90 bp CAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACACACGTGGGGAAACCTaGTCAGATGAAATGTTTCCA +
Preference number: 2 (lower is better)
Translates to: QGAARESRTRQEKMDMADTRGET*SDEMFP
Trigger: TGGAAACATTTCATCTGAGCAGGTTTCCCCACGTGT...GTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CCA 90 bp GTGAATTTCAATGGGATAATCAAACCACCCCTAAGTTGGCAGCTGACCCAGAACGAGGCTCACTGGGGATaGCTTCAGAGGACACTGAGG +
Preference number: 2 (lower is better)
Translates to: VNFNGIIKPPLSWQLTQNEAHWG*LQRTLR
Trigger: CCTCAGTGTCCTCTGAAGCCATCCCCAGTGAGCCTC...GTTCTGGGTCAGCTGCCAACTTAGGGGTGGTTTGATTATCCCATTGAAATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CCA 90 bp CCAGGGAATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGTCAGAGCATGGCTGCTaGAAGAACTGGCAATCCCAG +
Preference number: 2 (lower is better)
Translates to: PGNESGYVQMRGSLAKALSEHGC*KNWQSQ
Trigger: CTGGGATTGCCAGTTCTTCCAGCAGCCATGCTCTGA...CAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATTCCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CCA 90 bp AAATGTGGGCTTTGCATGTTGGGGAGTGATGGGTTCCATGCCAGTAGGGACCAGACAAGTATGCTGGTCTaGGGAGAAATCCCCATGCAT +
Preference number: 2 (lower is better)
Translates to: KCGLCMLGSDGFHASRDQTSMLV*GEIPMH
Trigger: ATGCATGGGGATTTCTCCCCAGACCAGCATACTTGT...CTGGTCCCTACTGGCATGGAACCCATCACTCCCCAACATGCAAAGCCCACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR TCA 90 bp AAATGTGGGCTTTGCATGTTGGGGAGTGATGGGTTCCATGCCAGTAGGGACCAGGGCATCTTTACGCATTaGACTCTCAGGTCACAAGTA +
Preference number: 2 (lower is better)
Translates to: KCGLCMLGSDGFHASRDQGIFTH*TLRSQV
Trigger: TACTTGTGACCTGAGAGTTCAATGCGTAAAGATGCC...CTGGTCCCTACTGGCATGGAACCCATCACTCCCCAACATGCAAAGCCCACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CCA 90 bp AATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATTGGACCCTCAGGGAGTaGGGAGGACTAGCCAACAGT +
Preference number: 2 (lower is better)
Translates to: NESGYVQMRGSLAKALVNWTLRE*GGLANS
Trigger: ACTGTTGGCTAGTCCTCCCCACTCCCTGAGGGTCCA...ATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CCA 90 bp CCAGGGAATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGTCTAAGCTAACTTACTaGACCCTCAGGGAGTGGGGA +
Preference number: 2 (lower is better)
Translates to: PGNESGYVQMRGSLAKALSKLTY*TLREWG
Trigger: TCCCCACTCCCTGAGGGTCCAGTAAGTTAGCTTAGA...CAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATTCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CCA 90 bp AATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATCCGGAGAGGAGGGGCTaGTCACTTATTATGCCCCTG +
Preference number: 2 (lower is better)
Translates to: NESGYVQMRGSLAKALVNPERRG*SLIMPL
Trigger: CAGGGGCATAATAAGTGACCAGCCCCTCCTCTCCGG...ATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CCA 90 bp AAATGTGGGCTTTGCATGTTGGGGAGTGATGGGTTCCATGCCAGTAGGGACCAGCTGAGTCTTTTCAGTTaGAGCCAGGGAATGAATCTG +
Preference number: 2 (lower is better)
Translates to: KCGLCMLGSDGFHASRDQLSLFS*SQGMNL
Trigger: CAGATTCATTCCCTGGCTCCAACTGAAAAGACTCAG...CTGGTCCCTACTGGCATGGAACCCATCACTCCCCAACATGCAAAGCCCACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CAA 90 bp AAATTCTTTGGGGAGCAGTTTGGGCACATGGTTTGCTGTGTTTTGTaGTGTTCTGTTCCTTATGTCAGGGCTACAGAGACACTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: KFFGEQFGHMVCCVL*CSVPYVRATETLAQ
Trigger: CTGGGCCAGTGTCTCTGTAGCCCTGACATAAGGAACAGAACACAACAAAACACAGCAAACCATGTGCCCAAACTGCTCCCCAAAGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR TCA 90 bp GAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGAGATGTATTTGAAATaGCGATGGCAGTTCAAGATA +
Preference number: 2 (lower is better)
Translates to: ERPENQGPGKRRWIWLTREMYLK*RWQFKI
Trigger: TATCTTGAACTGCCATCGTCATTTCAAATACATCTC...CCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR GCA 90 bp CCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCTTTGGGCACATGGTTTaGTGTGTTTTGTTGTGTTCT +
Preference number: 2 (lower is better)
Translates to: PENQGPGKRRWIWLTRGIFGHMV*CVLLCS
Trigger: AGAACACAACAAAACACAGCAAACCATGTGCCCAAA...GATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CCA 90 bp AATTTGAAACTGTGTTCTTCTTGCCATCTTCACGACATCCCCTGCCCTCTTACAGGGCTACAGAGACACTaGCCCAGCTATTTTCAGCAG +
Preference number: 2 (lower is better)
Translates to: NLKLCSSCHLHDIPCPLTGLQRH*PSYFQQ
Trigger: CTGCTGAAAATAGCTGGGCCAGTGTCTCTGTAGCCC...TGTAAGAGGGCAGGGGATGTCGTGAAGATGGCAAGAAGAACACAGTTTCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CCA 90 bp GTGAATTTCAATGGGATAATCAAACCACCCCTAAGTTGGCAGCTGACCCAGAACGGCTGCTGGAAGAACTaGCAATCCCAGAATCTCCTT +
Preference number: 2 (lower is better)
Translates to: VNFNGIIKPPLSWQLTQNGCWKN*QSQNLL
Trigger: AAGGAGATTCTGGGATTGCCAGTTCTTCCAGCAGCC...GTTCTGGGTCAGCTGCCAACTTAGGGGTGGTTTGATTATCCCATTGAAATTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CCA 90 bp AATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCTTTACGTTGATTTTCAGAGCATaGCTGCTGGAAGAACTGGCA +
Preference number: 2 (lower is better)
Translates to: NQGPGKRRWIWLTRGIFTLIFRA*LLEELA
Trigger: TGCCAGTTCTTCCAGCAGCCATGCTCTGAAAATCAA...CGTAAAGATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CCA 90 bp AATTTGAAACTGTGTTCTTCTTGCCATCTTCACGACATCCCCTGCCCTCTTACAGTGGGCTTTGCATGTTaGGGAGTGATGGGTTCCATG +
Preference number: 2 (lower is better)
Translates to: NLKLCSSCHLHDIPCPLTVGFAC*GVMGSM
Trigger: CATGGAACCCATCACTCCCCAACATGCAAAGCCCAC...TGTAAGAGGGCAGGGGATGTCGTGAAGATGGCAAGAAGAACACAGTTTCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CAA 90 bp TCAAAATTCTTTGGGGAGCAGTTTGGGCACATGGTTTGCTGTGTTTaGTTGTGTTCTGTTCCTTATGTCAGGGCTACAGAGACACTGGCC +
Preference number: 2 (lower is better)
Translates to: SKFFGEQFGHMVCCV*LCSVPYVRATETLA
Trigger: GGCCAGTGTCTCTGTAGCCCTGACATAAGGAACAGAACACAACAAAACACAGCAAACCATGTGCCCAAACTGCTCCCCAAAGAATTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CAA 90 bp TTGGAGCCAGGGAATGAATCTGGGTATGTCCAAATGAGAGGGTCTTaGGCAAAGGCACTGGTGAATTTCAATGGGATAATCAAACCACCC +
Preference number: 2 (lower is better)
Translates to: LEPGNESGYVQMRGS*AKALVNFNGIIKPP
Trigger: GGGTGGTTTGATTATCCCATTGAAATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATTCCCTGGCTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR GCA 90 bp AATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATCTCAGGTCACAAGTATaGTGGTCTGGGGAGAAATCC +
Preference number: 2 (lower is better)
Translates to: NESGYVQMRGSLAKALVNLRSQV*WSGEKS
Trigger: GGATTTCTCCCCAGACCAGCATACTTGTGACCTGAG...ATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR GCA 90 bp AATTTGAAACTGTGTTCTTCTTGCCATCTTCACGACATCCCCTGCCCTCTTACAGCTGGTCACTTATTATaGCCCTGGGAAGGCCTGAAT +
Preference number: 2 (lower is better)
Translates to: NLKLCSSCHLHDIPCPLTAGHLL*PWEGLN
Trigger: ATTCAGGCCTTCCCAGGGGCATAATAAGTGACCAGC...TGTAAGAGGGCAGGGGATGTCGTGAAGATGGCAAGAAGAACACAGTTTCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CCA 90 bp GTGAATTTCAATGGGATAATCAAACCACCCCTAAGTTGGCAGCTGACCCAGAACCCTGAATCTGGCTGCTaGCGAACAAGTTCTTGTCTA +
Preference number: 2 (lower is better)
Translates to: VNFNGIIKPPLSWQLTQNPESGC*RTSSCL
Trigger: TAGACAAGAACTTGTTCGCCAGCAGCCAGATTCAGG...GTTCTGGGTCAGCTGCCAACTTAGGGGTGGTTTGATTATCCCATTGAAATTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR TCA 90 bp AATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATGGAAACCTGCTCAGATaGAATGTTTCCAGGAAGGTT +
Preference number: 2 (lower is better)
Translates to: NESGYVQMRGSLAKALVNGNLLR*NVSRKV
Trigger: AACCTTCCTGGAAACATTTCATCTGAGCAGGTTTCC...ATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR TCA 90 bp AATTTGAAACTGTGTTCTTCTTGCCATCTTCACGACATCCCCTGCCCTCTTACAACACACACACACACATaGCAAACTCTAAGTCTCCAG +
Preference number: 2 (lower is better)
Translates to: NLKLCSSCHLHDIPCPLTTHTHT*QTLSLQ
Trigger: CTGGAGACTTAGAGTTTGTCATGTGTGTGTGTGTGT...TGTAAGAGGGCAGGGGATGTCGTGAAGATGGCAAGAAGAACACAGTTTCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR TCA 90 bp AATTTGAAACTGTGTTCTTCTTGCCATCTTCACGACATCCCCTGCCCTCTTACAATTTCACCACAACAGTaGCTTGCTGGAAGTTTTGTG +
Preference number: 2 (lower is better)
Translates to: NLKLCSSCHLHDIPCPLTISPQQ*LAGSFV
Trigger: CACAAAACTTCCAGCAAGTCACTGTTGTGGTGAAAT...TGTAAGAGGGCAGGGGATGTCGTGAAGATGGCAAGAAGAACACAGTTTCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CCA 90 bp AATTTGAAACTGTGTTCTTCTTGCCATCTTCACGACATCCCCTGCCCTCTTACAAGACTCAAAATTCTTTaGGGAGCAGTTTGGGCACAT +
Preference number: 2 (lower is better)
Translates to: NLKLCSSCHLHDIPCPLTRLKIL*GAVWAH
Trigger: ATGTGCCCAAACTGCTCCCCAAAGAATTTTGAGTCT...TGTAAGAGGGCAGGGGATGTCGTGAAGATGGCAAGAAGAACACAGTTTCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR TCA 72 bp GAGTCGAGGCTCACTGGGGATGGCTTCAGAGGACACTaGGGCCCCTCTCAGGGAGGGCAAGGCACAGATACC +
Preference number: 3 (lower is better)
Translates to: ESRLTGDGFRGH*GPSQGGQGTDT
Trigger: GGTATCTGTGCCTTGCCCTCCCTGAGAGGGGCCTCAGTGTCCTCTGAAGCCATCCCCAGTGAGCCTCGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR TCA 72 bp CTGTCCAGTCCATGTCAGCAGAAGGCTCTGGGCGTGTaGGGGAGGGTCTGGAGAACTAAGCGAAGGAGGCAA +
Preference number: 3 (lower is better)
Translates to: LSSPCQQKALGV*GRVWRTKRRRQ
Trigger: TTGCCTCCTTCGCTTAGTTCTCCAGACCCTCCCTCACACGCCCAGAGCCTTCTGCTGACATGGACTGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR GCA 72 bp TCTGATGTCCGGAGAGGAGGGGCTGGTCACTTATTATaGCCCTGGGAAGGCCTGAATCTGGCTGCTGGCGAA +
Preference number: 3 (lower is better)
Translates to: SDVRRGGAGHLL*PWEGLNLAAGE
Trigger: TTCGCCAGCAGCCAGATTCAGGCCTTCCCAGGGGCATAATAAGTGACCAGCCCCTCCTCTCCGGACATCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CCA 72 bp CCAGCTATTTTCAGCAGGGACAGAGTCGAGGCTCACTaGGGATGGCTTCAGAGGACACTGAGGCCCCTCTCA +
Preference number: 3 (lower is better)
Translates to: PAIFSRDRVEAH*GWLQRTLRPLS
Trigger: TGAGAGGGGCCTCAGTGTCCTCTGAAGCCATCCCCAGTGAGCCTCGACTCTGTCCCTGCTGAAAATAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CCA 72 bp GTCCGGAGAGGAGGGGCTGGTCACTTATTATGCCCCTaGGAAGGCCTGAATCTGGCTGCTGGCGAACAAGTT +
Preference number: 3 (lower is better)
Translates to: VRRGGAGHLLCP*EGLNLAAGEQV
Trigger: AACTTGTTCGCCAGCAGCCAGATTCAGGCCTTCCCAGGGGCATAATAAGTGACCAGCCCCTCCTCTCCGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CCA 72 bp GAAGGTTCTAAGCTAACTTACTGGACCCTCAGGGAGTaGGGAGGACTAGCCAACAGTGTCCACACTGCAGAG +
Preference number: 3 (lower is better)
Translates to: EGSKLTYWTLRE*GGLANSVHTAE
Trigger: CTCTGCAGTGTGGACACTGTTGGCTAGTCCTCCCCACTCCCTGAGGGTCCAGTAAGTTAGCTTAGAACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CCA 72 bp GCTTCTGGAGGCTCTGGGGACTCATTGGATGGGTACTaGCTAGGTAGATGGGAAGGGGGCCTGTTTAAAGAA +
Preference number: 3 (lower is better)
Translates to: ASGGSGDSLDGY*LGRWEGGLFKE
Trigger: TTCTTTAAACAGGCCCCCTTCCCATCTACCTAGCCAGTACCCATCCAATGAGTCCCCAGAGCCTCCAGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR GCA 72 bp TCACTTATTATGCCCCTGGGAAGGCCTGAATCTGGCTaGTGGCGAACAAGTTCTTGTCTAGCTGCCTGGACA +
Preference number: 3 (lower is better)
Translates to: SLIMPLGRPESG*WRTSSCLAAWT
Trigger: TGTCCAGGCAGCTAGACAAGAACTTGTTCGCCAGCAGCCAGATTCAGGCCTTCCCAGGGGCATAATAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CCA 72 bp TGTGTTCTGTTCCTTATGTCAGGGCTACAGAGACACTaGCCCAGCTATTTTCAGCAGGGACAGAGTCGAGGC +
Preference number: 3 (lower is better)
Translates to: CVLFLMSGLQRH*PSYFQQGQSRG
Trigger: GCCTCGACTCTGTCCCTGCTGAAAATAGCTGGGCCAGTGTCTCTGTAGCCCTGACATAAGGAACAGAACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CCA 72 bp CTTATTATGCCCCTGGGAAGGCCTGAATCTGGCTGCTaGCGAACAAGTTCTTGTCTAGCTGCCTGGACAGAT +
Preference number: 3 (lower is better)
Translates to: LIMPLGRPESGC*RTSSCLAAWTD
Trigger: ATCTGTCCAGGCAGCTAGACAAGAACTTGTTCGCCAGCAGCCAGATTCAGGCCTTCCCAGGGGCATAATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CCA 72 bp TCTTTCCAAGAGTGTCGGCCTCTTAACAGGAAGTCGTaGGAGGGAATAATTCCCCCAGCCACTTGCTCCATG +
Preference number: 3 (lower is better)
Translates to: SFQECRPLNRKS*EGIIPPATCSM
Trigger: CATGGAGCAAGTGGCTGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTGGAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375481.1
3UTR-3UTR CAA 90 bp AATTGGGGGTGGCCACCTGGAAACCCTGAGGGAGATGTATTTGAAATGACGATGTCTTTGGGGAGCAGTTaGGGCACATGGTTTGCTGTG +
Preference number: 3 (lower is better)
Translates to: NWGWPPGNPEGDVFEMTMSLGSS*GTWFAV
Trigger: CACAGCAAACCATGTGCCCAAACTGCTCCCCAAAGA...CATCGTCATTTCAAATACATCTCCCTCAGGGTTTCCAGGTGGCCACCCCCAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR TCA 72 bp AGATGGATATGGCTGACCAGGGGCATCTTTACGCATTaGACTCTCAGGTCACAAGTATGCTGGTCTGGGGAG +
Preference number: 3 (lower is better)
Translates to: RWIWLTRGIFTH*TLRSQVCWSGE
Trigger: CTCCCCAGACCAGCATACTTGTGACCTGAGAGTTCAATGCGTAAAGATGCCCCTGGTCAGCCATATCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CAA 90 bp AATTTGAAACTGTGTTCTTCTTGCCATCTTCACGACATCCCCTGCCCTCTTACATATCCACACCGAGGGTaGTCACACTGGGTGGGCAAG +
Preference number: 3 (lower is better)
Translates to: NLKLCSSCHLHDIPCPLTYPHRG*SHWVGK
Trigger: CTTGCCCACCCAGTGTGACAACCCTCGGTGTGGATA...TGTAAGAGGGCAGGGGATGTCGTGAAGATGGCAAGAAGAACACAGTTTCAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR TCA 72 bp AGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTaGCCAGGGGCATCTTTACGCATTGAACTCTCAGGT +
Preference number: 3 (lower is better)
Translates to: RIKDQAREDGYG*PGASLRIELSG
Trigger: ACCTGAGAGTTCAATGCGTAAAGATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CCA 72 bp TCTGGCTGCTGGCGAACAAGTTCTTGTCTAGCTGCCTaGACAGATGGCACCAGGAATAAAAAGGAAGAAAGT +
Preference number: 3 (lower is better)
Translates to: SGCWRTSSCLAA*TDGTRNKKEES
Trigger: ACTTTCTTCCTTTTTATTCCTGGTGCCATCTGTCCAGGCAGCTAGACAAGAACTTGTTCGCCAGCAGCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CCA 72 bp GAGAGGGTCTTTGGCAAAGGCACTGGTGAATTTCAATaGGATAATCAAACCACCCCTAAGTTGGCAGCTGAC +
Preference number: 3 (lower is better)
Translates to: ERVFGKGTGEFQ*DNQTTPKLAAD
Trigger: GTCAGCTGCCAACTTAGGGGTGGTTTGATTATCCCATTGAAATTCACCAGTGCCTTTGCCAAAGACCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CCA 72 bp ACTAACCACTGTGTTTGCAGAGCCCAACGCCGTGCCTaGCGCTTAGTGGCATACAACAAATGTTTGTTGAAT +
Preference number: 3 (lower is better)
Translates to: TNHCVCRAQRRA*RLVAYNKCLLN
Trigger: ATTCAACAAACATTTGTTGTATGCCACTAAGCGCCAGGCACGGCGTTGGGCTCTGCAAACACAGTGGTTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CAA 90 bp CCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCGTTTGCTGTGTTTTGTaGTGTTCTGTTCCTTATGTC +
Preference number: 3 (lower is better)
Translates to: PENQGPGKRRWIWLTRGIVCCVL*CSVPYV
Trigger: GACATAAGGAACAGAACACAACAAAACACAGCAAAC...GATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CAA 90 bp GTGAATTTCAATGGGATAATCAAACCACCCCTAAGTTGGCAGCTGACCCAGAACTCCATGGATTCTACCTaGATTTTCAGAGCATGGCTG +
Preference number: 3 (lower is better)
Translates to: VNFNGIIKPPLSWQLTQNSMDST*IFRAWL
Trigger: CAGCCATGCTCTGAAAATCAAGGTAGAATCCATGGA...GTTCTGGGTCAGCTGCCAACTTAGGGGTGGTTTGATTATCCCATTGAAATTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CAA 90 bp AATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATGTTTGGGCACATGGTTaGCTGTGTTTTGTTGTGTTC +
Preference number: 3 (lower is better)
Translates to: NESGYVQMRGSLAKALVNVWAHG*LCFVVF
Trigger: GAACACAACAAAACACAGCAAACCATGTGCCCAAAC...ATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR-3UTR CAA 90 bp AATTTGAAACTGTGTTCTTCTTGCCATCTTCACGACATCCCCTGCCCTCTTACAATGGTTTGCTGTGTTTaGTTGTGTTCTGTTCCTTAT +
Preference number: 3 (lower is better)
Translates to: NLKLCSSCHLHDIPCPLTMVCCV*LCSVPY
Trigger: ATAAGGAACAGAACACAACAAAACACAGCAAACCAT...TGTAAGAGGGCAGGGGATGTCGTGAAGATGGCAAGAAGAACACAGTTTCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp GAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCCGGAGAGGAGGGGCTGGTTTGGGCCCCGGCTaGGGCCGCGCTGTAGACATC +
Preference number: 4 (lower is better)
Translates to: EGRPGSLCVGSDVRRGGAGLGPG*GRAVDI
Trigger: GATGTCTACAGCGCGGCCCCAGCCGGGGCCCAAACC...AGCCCCTCCTCTCCGGACATCAGATCCAACACATAAGGACCCTGGCCTACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp GAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCCGGAGAGGAGGGGCTCCCGCAGGGTGGTGCTaGGCGAGAGAAGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: EGRPGSLCVGSDVRRGGAPAGWC*AREASA
Trigger: AGCGCTGGCTTCTCTCGCCCAGCACCACCCTGCGGG...AGCCCCTCCTCTCCGGACATCAGATCCAACACATAAGGACCCTGGCCTACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp CAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACTCGCCTGGCTCATGGTaGCCCGCAGGGTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QGAARESRTRQEKMDMADSPGSW*PAGWCW
Trigger: CCAGCACCACCCTGCGGGTCACCATGAGCCAGGCGA...GTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp CCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCACGCGGCTCCCGTACTaGAGCCGCACGGTCCGCTCG +
Preference number: 4 (lower is better)
Translates to: PENQGPGKRRWIWLTRGITRLPY*SRTVRS
Trigger: CGAGCGGACCGTGCGGCTGCAGTACGGGAGCCGCGT...GATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp GAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGCCACTGGTTTGGGCCCCGGCTaGGGCCGCGCTGTAGACATC +
Preference number: 4 (lower is better)
Translates to: ECRPLNRKSWEGIIPPATGLGPG*GRAVDI
Trigger: GATGTCTACAGCGCGGCCCCAGCCGGGGCCCAAACC...AGTGGCTGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp CAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACGCCTCGGTGCTCGCCTaGCTCATGGTGACCCGCAGG +
Preference number: 4 (lower is better)
Translates to: QGAARESRTRQEKMDMADASVLA*LMVTRR
Trigger: CCTGCGGGTCACCATGAGCCAGGCGAGCACCGAGGC...GTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp GAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCCGGAGAGGAGGGGCTTCCTGCGGACGTTGGTaGCACAGTGGACTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: EGRPGSLCVGSDVRRGGASCGRW*HSGLPP
Trigger: TGGGGGAAGTCCACTGTGGCACCAACGTCCGCAGGA...AGCCCCTCCTCTCCGGACATCAGATCCAACACATAAGGACCCTGGCCTACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp GAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCCGGAGAGGAGGGGCTGCATGCGGGGGAGCCTaGATCCCTGAGACAGATGAG +
Preference number: 4 (lower is better)
Translates to: EGRPGSLCVGSDVRRGGAACGGA*IPETDE
Trigger: CTCATCTGTCTCAGGGATGCAGGCTCCCCCGCATGC...AGCCCCTCCTCTCCGGACATCAGATCCAACACATAAGGACCCTGGCCTACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CAA 72 bp CTGTTGGGCTGGAGGGTAGGCCAGGGTCCTTATGTGTaGGATCTGATGTCCGGAGAGGAGGGGCTGGTCACT +
Preference number: 4 (lower is better)
Translates to: LLGWRVGQGPYV*DLMSGEEGLVT
Trigger: AGTGACCAGCCCCTCCTCTCCGGACATCAGATCCAACACATAAGGACCCTGGCCTACCCTCCAGCCCAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp GATGGGTTCCATGCCAGTAGGGACCAGGTCCAGACTGCTACTAACCACTGTGTTCCGAGTGCTTCAGGCTaGAGGTTTGGGCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: DGFHASRDQVQTATNHCVPSASG*RFGPRL
Trigger: CAGCCGGGGCCCAAACCTTCAGCCTGAAGCACTCGG...AACACAGTGGTTAGTAGCAGTCTGGACCTGGTCCCTACTGGCATGGAACCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp TTCCAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCATCGCCTGGCTCATGGTaGCCCGCAGGGTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FQECRPLNRKSWEGIIPPSPGSW*PAGWCW
Trigger: CCAGCACCACCCTGCGGGTCACCATGAGCCAGGCGA...TGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR TCA 90 bp GAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGCCACTGATGGAGACCAGGCCTaGGAAGCCCTCGTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: ECRPLNRKSWEGIIPPATDGDQA*EALVGE
Trigger: TTCCCCGACGAGGGCTTCTCAGGCCTGGTCTCCATC...AGTGGCTGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR GCA 90 bp CAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGCCCGGTCCAGAGGTAGGTaGCCAGCACGTACACCGCCT +
Preference number: 4 (lower is better)
Translates to: QECRPLNRKSWEGIIPPARSRGR*PARTPP
Trigger: AGGCGGTGTACGTGCTGGGCACCTACCTCTGGACCG...GGCTGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR GCA 90 bp CTGGCTGTTGGGCTGGAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCAGGAGGCCACGCACGTaGATCTCCAGGCAGCATTCC +
Preference number: 4 (lower is better)
Translates to: LAVGLEGRPGSLCVGSDVRRPRT*ISRQHS
Trigger: GGAATGCTGCCTGGAGATGCACGTGCGTGGCCTCCT...GACATCAGATCCAACACATAAGGACCCTGGCCTACCCTCCAGCCCAACAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp TTCCAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCACCCGCAGGGTGGTGCTaGGCGAGAGAAGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: FQECRPLNRKSWEGIIPPPAGWC*AREASA
Trigger: AGCGCTGGCTTCTCTCGCCCAGCACCACCCTGCGGG...TGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp AAGGAGGAAGGTCAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGAAACGCCAGGGCCCCTaGCAGGTCAGGGCACCATGT +
Preference number: 4 (lower is better)
Translates to: KEEGQGAARESRTRQEKMKRQGP*QVRAPC
Trigger: ACATGGTGCCCTGACCTGCCAGGGGCCCTGGCGTTT...CATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTGACCTTCCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp GAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCCGGAGAGGAGGGGCTGGTGGGCAAGTGAGATaGGAACGGGTGTGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: EGRPGSLCVGSDVRRGGAGGQVR*ERVCES
Trigger: GGACTCACACACCCGTTCCCATCTCACTTGCCCACC...AGCCCCTCCTCTCCGGACATCAGATCCAACACATAAGGACCCTGGCCTACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp TTCCAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCACCGAGTGCTTCAGGCTaGAGGTTTGGGCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: FQECRPLNRKSWEGIIPPPSASG*RFGPRL
Trigger: CAGCCGGGGCCCAAACCTTCAGCCTGAAGCACTCGG...TGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR TCA 90 bp CCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCGATGGAGACCAGGCCTaGGAAGCCCTCGTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: PENQGPGKRRWIWLTRGIDGDQA*EALVGE
Trigger: TTCCCCGACGAGGGCTTCTCAGGCCTGGTCTCCATC...GATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp CATGAGTCCACGGGGGTATATCCACACCGAGGGTTGTCACACTGGGTGGGCAAGCTTATGTGTTGGATCTaGTGTCCGGAGAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: HESTGVYPHRGLSHWVGKLMCWI*CPERRG
Trigger: GCCCCTCCTCTCCGGACATCAGATCCAACACATAAG...CTTGCCCACCCAGTGTGACAACCCTCGGTGTGGATATACCCCCGTGGACTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp CTTGATTTTCTTTCCAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAAACGCGGCTCCCGTACTaGAGCCGCACGGTCCGCTCG +
Preference number: 4 (lower is better)
Translates to: LDFLSKSVGLLTGSRGRETRLPY*SRTVRS
Trigger: CGAGCGGACCGTGCGGCTGCAGTACGGGAGCCGCGT...TTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTGGAAAGAAAATCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR GCA 90 bp CAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACGAAGCCAGCGCTGCTTaGCATTGGTGGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: QGAARESRTRQEKMDMADEASAA*HWWPPP
Trigger: AGGAGGTGGCCACCAATGGCAAGCAGCGCTGGCTTC...GTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp AAATGTGGGCTTTGCATGTTGGGGAGTGATGGGTTCCATGCCAGTAGGGACCAGGCCCCGCCTGGTCGATaGGAATGCTCCCTTCCTCGT +
Preference number: 4 (lower is better)
Translates to: KCGLCMLGSDGFHASRDQAPPGR*ECSLPR
Trigger: ACGAGGAAGGGAGCATTCCCATCGACCAGGCGGGGC...CTGGTCCCTACTGGCATGGAACCCATCACTCCCCAACATGCAAAGCCCACATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp GAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGCCACTCACGGCAGTCCTCCTTaGGCAACCAGGGTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: ECRPLNRKSWEGIIPPATHGSPP*ATRVSL
Trigger: GAGAGACACCCTGGTTGCCCAAGGAGGACTGCCGTG...AGTGGCTGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp CATGAGTCCACGGGGGTATATCCACACCGAGGGTTGTCACACTGGGTGGGCAAGCAGTCTAGGCAGCGCTaGAAGTACAGGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HESTGVYPHRGLSHWVGKQSRQR*KYRFSC
Trigger: GCAGGAGAACCTGTACTTCCAGCGCTGCCTAGACTG...CTTGCCCACCCAGTGTGACAACCCTCGGTGTGGATATACCCCCGTGGACTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp CATGAGTCCACGGGGGTATATCCACACCGAGGGTTGTCACACTGGGTGGGCAAGAGAGTCGAGGCTCACTaGGGATGGCTTCAGAGGACA +
Preference number: 4 (lower is better)
Translates to: HESTGVYPHRGLSHWVGKRVEAH*GWLQRT
Trigger: TGTCCTCTGAAGCCATCCCCAGTGAGCCTCGACTCT...CTTGCCCACCCAGTGTGACAACCCTCGGTGTGGATATACCCCCGTGGACTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp GAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGGGCTGGAGAGATCTaGGGCTTTGGCCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: ERPENQGPGKRRWIWLTRGAGEI*GFGLQR
Trigger: CCTTTGGAGGCCAAAGCCCCAGATCTCTCCAGCCCC...CCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp CAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGCCAGATCTCAATGGCTGTaGGGAAGAGCCCCGCCTGGT +
Preference number: 4 (lower is better)
Translates to: QECRPLNRKSWEGIIPPARSQWL*GRAPPG
Trigger: ACCAGGCGGGGCTCTTCCTCACAGCCATTGAGATCT...GGCTGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR TCA 90 bp CAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGCCTGTACTCCAGCAGGCTaGCATGGATGGAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: QECRPLNRKSWEGIIPPACTPAG*HGWRPG
Trigger: GCCTGGTCTCCATCCATGTCAGCCTGCTGGAGTACA...GGCTGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR TCA 90 bp GAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGAGCGGGCAGGTCAATaGTGTCCTGCTCTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: ERPENQGPGKRRWIWLTRERAGQ*CPALSV
Trigger: GACTGACAGAGCAGGACATCATTGACCTGCCCGCTC...CCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp CCAGGGAATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGGCTTCAGAGGACACTaGGGCCCCTCTCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PGNESGYVQMRGSLAKALGFRGH*GPSQGG
Trigger: CCCTCCCTGAGAGGGGCCTCAGTGTCCTCTGAAGCC...CAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp CATGAGTCCACGGGGGTATATCCACACCGAGGGTTGTCACACTGGGTGGGCAAGGAAGATGGATATGGCTaGCCAGGGGCATCTTTACGC +
Preference number: 4 (lower is better)
Translates to: HESTGVYPHRGLSHWVGKEDGYG*PGASLR
Trigger: GCGTAAAGATGCCCCTGGTCAGCCATATCCATCTTC...CTTGCCCACCCAGTGTGACAACCCTCGGTGTGGATATACCCCCGTGGACTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp GATGGGTTCCATGCCAGTAGGGACCAGGTCCAGACTGCTACTAACCACTGTGTTGAGAGAAGCCAGCGCTaGTTGCCATTGGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: DGFHASRDQVQTATNHCVERSQR*LPLVAT
Trigger: GGTGGCCACCAATGGCAAGCAGCGCTGGCTTCTCTC...AACACAGTGGTTAGTAGCAGTCTGGACCTGGTCCCTACTGGCATGGAACCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp AATTGGGGGTGGCCACCTGGAAACCCTGAGGGAGATGTATTTGAAATGACGATGGGCGGTCGGGGCCTTTaGTCCGCAGGATCATCTGGG +
Preference number: 4 (lower is better)
Translates to: NWGWPPGNPEGDVFEMTMGGRGL*SAGSSG
Trigger: CCCAGATGATCCTGCGGACCAAAGGCCCCGACCGCC...CATCGTCATTTCAAATACATCTCCCTCAGGGTTTCCAGGTGGCCACCCCCAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp AAGGAGGAAGGTCAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGTCCAGCAGGCTGACATaGATGGAGACCAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: KEEGQGAARESRTRQEKMSSRLT*METRPE
Trigger: CTCAGGCCTGGTCTCCATCCATGTCAGCCTGCTGGA...CATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTGACCTTCCTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp AAGGAGGAAGGTCAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGTTGGGAAGAAGGCTCTaGCACGGTGGTCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: KEEGQGAARESRTRQEKMLGRRL*HGGPRP
Trigger: TGGACGAGGACCACCGTGCCAGAGCCTTCTTCCCAA...CATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTGACCTTCCTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp CAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACGAGGCTCACTGGGGATaGCTTCAGAGGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: QGAARESRTRQEKMDMADEAHWG*LQRTLR
Trigger: CCTCAGTGTCCTCTGAAGCCATCCCCAGTGAGCCTC...GTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp GAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCCGGAGAGGAGGGGCTGTGGGCTTTGCATGTTaGGGAGTGATGGGTTCCATG +
Preference number: 4 (lower is better)
Translates to: EGRPGSLCVGSDVRRGGAVGFAC*GVMGSM
Trigger: CATGGAACCCATCACTCCCCAACATGCAAAGCCCAC...AGCCCCTCCTCTCCGGACATCAGATCCAACACATAAGGACCCTGGCCTACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp GAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGCCACTAGCCACCCGTGTACTTaGCCACATGGTAGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: ECRPLNRKSWEGIIPPATSHPCT*PHGRAS
Trigger: GGAAGCTCTACCATGTGGTCAAGTACACGGGTGGCT...AGTGGCTGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR TCA 90 bp GATGGGTTCCATGCCAGTAGGGACCAGGTCCAGACTGCTACTAACCACTGTGTTGGTCCTCGTCCATCTTaGACAGAGCGGGCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: DGFHASRDQVQTATNHCVGPRPS*TERAGQ
Trigger: TTGACCTGCCCGCTCTGTTCAAGATGGACGAGGACC...AACACAGTGGTTAGTAGCAGTCTGGACCTGGTCCCTACTGGCATGGAACCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp AATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCTTTACGCGGTCCAGAGGTAGGTaGCCAGCACGTACACCGCCT +
Preference number: 4 (lower is better)
Translates to: NQGPGKRRWIWLTRGIFTRSRGR*PARTPP
Trigger: AGGCGGTGTACGTGCTGGGCACCTACCTCTGGACCG...CGTAAAGATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp TTCCAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGAAGCCAGCGCTGCTTaGCATTGGTGGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: FQECRPLNRKSWEGIIPPEASAA*HWWPPP
Trigger: AGGAGGTGGCCACCAATGGCAAGCAGCGCTGGCTTC...TGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR GCA 90 bp TTCCAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGAGAGAAGCCAGCGCTaGTTGCCATTGGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: FQECRPLNRKSWEGIIPPERSQR*LPLVAT
Trigger: GGTGGCCACCAATGGCAAGCAGCGCTGGCTTCTCTC...TGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR GCA 90 bp CAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGCCATTCCCCCAGCCACTTaGTCCATGTGTGAGCAACCC +
Preference number: 4 (lower is better)
Translates to: QECRPLNRKSWEGIIPPAIPPAT*SMCEQP
Trigger: GGGTTGCTCACACATGGAGCAAGTGGCTGGGGGAAT...GGCTGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp TTCCAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAAGGAAGAGCCCCGCCTaGTCGATGGGAATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: FQECRPLNRKSWEGIIPPRKSPA*SMGMLP
Trigger: AGGGAGCATTCCCATCGACCAGGCGGGGCTCTTCCT...TGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp CTTGATTTTCTTTCCAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAAGGCGGTCGGGGCCTTTaGTCCGCAGGATCATCTGGG +
Preference number: 4 (lower is better)
Translates to: LDFLSKSVGLLTGSRGREGGRGL*SAGSSG
Trigger: CCCAGATGATCCTGCGGACCAAAGGCCCCGACCGCC...TTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTGGAAAGAAAATCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp CCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCGTCAGGGGAATGTCCTaGGCCATGTACTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PENQGPGKRRWIWLTRGIVRGMS*AMYSSR
Trigger: CCTGCTGGAGTACATGGCCCAGGACATTCCCCTGAC...GATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp CAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGCCCACGTAGCCAAAATCTaGGCCCAGGAGCTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: QECRPLNRKSWEGIIPPAHVAKI*AQELLH
Trigger: GTGAAGGAGCTCCTGGGCCCAGATTTTGGCTACGTG...GGCTGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp GAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCCGGAGAGGAGGGGCTACGTTGGTGCCACAGTaGACTTCCCCCAGAAATTTG +
Preference number: 4 (lower is better)
Translates to: EGRPGSLCVGSDVRRGGATLVPQ*TSPRNL
Trigger: CAAATTTCTGGGGGAAGTCCACTGTGGCACCAACGT...AGCCCCTCCTCTCCGGACATCAGATCCAACACATAAGGACCCTGGCCTACCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp GATGGGTTCCATGCCAGTAGGGACCAGGTCCAGACTGCTACTAACCACTGTGTTCCGGAGAGGAGGGGCTaGTCACTTATTATGCCCCTG +
Preference number: 4 (lower is better)
Translates to: DGFHASRDQVQTATNHCVPERRG*SLIMPL
Trigger: CAGGGGCATAATAAGTGACCAGCCCCTCCTCTCCGG...AACACAGTGGTTAGTAGCAGTCTGGACCTGGTCCCTACTGGCATGGAACCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp CAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACAGAGATCTGGGGCTTTaGCCTCCAAAGGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: QGAARESRTRQEKMDMADRDLGL*PPKAGA
Trigger: AGCTCCTGCCTTTGGAGGCCAAAGCCCCAGATCTCT...GTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp GAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCCGGAGAGGAGGGGCTTCTGGGACATGTCCTTaGGATCTTCCTTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: EGRPGSLCVGSDVRRGGASGTCP*DLPCCR
Trigger: TCTACAGCAAGGAAGATCTCAAGGACATGTCCCAGA...AGCCCCTCCTCTCCGGACATCAGATCCAACACATAAGGACCCTGGCCTACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp CAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGCCATATCACGGTGTCCGTaGAGATGGGAGTCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: QECRPLNRKSWEGIIPPAISRCP*RWESGE
Trigger: TTCCCCTGACTCCCATCTTCACGGACACCGTGATAT...GGCTGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR TCA 90 bp GAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGCCACTATGAGTCAAGGCTGGTaGCAGACTCAAAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: ECRPLNRKSWEGIIPPATMSQGW*QTQRGA
Trigger: AGCCCCTCTTTGAGTCTGTCACCAGCCTTGACTCAT...AGTGGCTGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR TCA 90 bp CCAGGGAATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGAAGGCTCTGGGCGTGTaGGGGAGGGTCTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: PGNESGYVQMRGSLAKALKALGV*GRVWRT
Trigger: AGTTCTCCAGACCCTCCCTCACACGCCCAGAGCCTT...CAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp CAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGCCCACACGTGTTCCGAGTaGTTCAGGCTGAAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: QECRPLNRKSWEGIIPPAHTCSE*FRLKVW
Trigger: CCAAACCTTCAGCCTGAAGCACTCGGAACACGTGTG...GGCTGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR GCA 90 bp CAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACGCAGGAATTTCTTTGTaGCGGGGATGGGGACAAAGG +
Preference number: 4 (lower is better)
Translates to: QGAARESRTRQEKMDMADAGISL*RGWGQR
Trigger: CCTTTGTCCCCATCCCCGGCACAAAGAAATTCCTGC...GTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp GAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCCGGAGAGGAGGGGCTACCACAACAGTGACTTaGTGGAAGTTTTGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: EGRPGSLCVGSDVRRGGATTTVT*WKFCAL
Trigger: CAGGGCACAAAACTTCCAGCAAGTCACTGTTGTGGT...AGCCCCTCCTCTCCGGACATCAGATCCAACACATAAGGACCCTGGCCTACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp AATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATTTCAGGCTGAAGGTTTaGGCCCCGGCTGGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: NESGYVQMRGSLAKALVNFRLKV*APAGAA
Trigger: CGCGGCCCCAGCCGGGGCCCAAACCTTCAGCCTGAA...ATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp AATTGGGGGTGGCCACCTGGAAACCCTGAGGGAGATGTATTTGAAATGACGATGAGGAAGAGCCCCGCCTaGTCGATGGGAATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: NWGWPPGNPEGDVFEMTMRKSPA*SMGMLP
Trigger: AGGGAGCATTCCCATCGACCAGGCGGGGCTCTTCCT...CATCGTCATTTCAAATACATCTCCCTCAGGGTTTCCAGGTGGCCACCCCCAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp TTCCAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGTCAGGGGAATGTCCTaGGCCATGTACTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FQECRPLNRKSWEGIIPPVRGMS*AMYSSR
Trigger: CCTGCTGGAGTACATGGCCCAGGACATTCCCCTGAC...TGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp CAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACTCAGAGCATGGCTGCTaGAAGAACTGGCAATCCCAG +
Preference number: 4 (lower is better)
Translates to: QGAARESRTRQEKMDMADSEHGC*KNWQSQ
Trigger: CTGGGATTGCCAGTTCTTCCAGCAGCCATGCTCTGA...GTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp AATTGGGGGTGGCCACCTGGAAACCCTGAGGGAGATGTATTTGAAATGACGATGAGGGTCCCGGGGTCCTaGGGTCCCTTTCCATGGATT +
Preference number: 4 (lower is better)
Translates to: NWGWPPGNPEGDVFEMTMRVPGS*GPFPWI
Trigger: AATCCATGGAAAGGGACCCCAGGACCCCGGGACCCT...CATCGTCATTTCAAATACATCTCCCTCAGGGTTTCCAGGTGGCCACCCCCAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp CTGGCTGTTGGGCTGGAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCATGAATAATTGGGGGTaGCCACCTGGAAACCCTGAG +
Preference number: 4 (lower is better)
Translates to: LAVGLEGRPGSLCVGSDVMNNWG*PPGNPE
Trigger: CTCAGGGTTTCCAGGTGGCCACCCCCAATTATTCAT...GACATCAGATCCAACACATAAGGACCCTGGCCTACCCTCCAGCCCAACAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp AATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCTTTACGGGATGTTGGGGGTCATaGTCCACGGAGCAATCCGGA +
Preference number: 4 (lower is better)
Translates to: NQGPGKRRWIWLTRGIFTGCWGS*STEQSG
Trigger: TCCGGATTGCTCCGTGGATCATGACCCCCAACATCC...CGTAAAGATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp CCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCATGAGTCAAGGCTGGTaGCAGACTCAAAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PENQGPGKRRWIWLTRGIMSQGW*QTQRGA
Trigger: AGCCCCTCTTTGAGTCTGTCACCAGCCTTGACTCAT...GATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp CCAGGGAATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGCGGTCACTGGGGGACTaGCCTCCAGGTTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: PGNESGYVQMRGSLAKALRSLGD*PPGFQM
Trigger: CATTTGGAAACCTGGAGGTCAGTCCCCCAGTGACCG...CAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATTCCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp CATGAGTCCACGGGGGTATATCCACACCGAGGGTTGTCACACTGGGTGGGCAAGGGAAACCTGCTCAGATaGAATGTTTCCAGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: HESTGVYPHRGLSHWVGKGNLLR*NVSRKV
Trigger: AACCTTCCTGGAAACATTTCATCTGAGCAGGTTTCC...CTTGCCCACCCAGTGTGACAACCCTCGGTGTGGATATACCCCCGTGGACTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp GAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCCGGAGAGGAGGGGCTGGCATCTTTACGCATTaGACTCTCAGGTCACAAGTA +
Preference number: 4 (lower is better)
Translates to: EGRPGSLCVGSDVRRGGAGIFTH*TLRSQV
Trigger: TACTTGTGACCTGAGAGTTCAATGCGTAAAGATGCC...AGCCCCTCCTCTCCGGACATCAGATCCAACACATAAGGACCCTGGCCTACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp AATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCTTTACGCACACCATCCCGGTCTaGGTCCACATCCAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: NQGPGKRRWIWLTRGIFTHTIPV*VHIQGD
Trigger: ATCTCCCTGGATGTGGACGCAGACCGGGATGGTGTG...CGTAAAGATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp GATGGGTTCCATGCCAGTAGGGACCAGGTCCAGACTGCTACTAACCACTGTGTTGCCCCAGGTCCAGGATaGCTTCTTTGGGTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: DGFHASRDQVQTATNHCVAPGPG*LLWVVL
Trigger: AAGAACAACCCAAAGAAGGCATCCTGGACCTGGGGC...AACACAGTGGTTAGTAGCAGTCTGGACCTGGTCCCTACTGGCATGGAACCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp AATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCTTTACGCAAGCGGGTATGTCTTaGCGTTCACGGTCACTGGGG +
Preference number: 4 (lower is better)
Translates to: NQGPGKRRWIWLTRGIFTQAGMS*RSRSLG
Trigger: CCCCAGTGACCGTGAACGGCAAGACATACCCGCTTG...CGTAAAGATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp GAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGCCACTCCTCGGTTTAGGTACTaGAAGCAGACCTTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ECRPLNRKSWEGIIPPATPRFRY*KQTFSS
Trigger: TGAGCTGAAGGTCTGCTTCCAGTACCTAAACCGAGG...AGTGGCTGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp AAGGAGGAAGGTCAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGAACTCAATTTCATCCTaGATCCAGCGATCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: KEEGQGAARESRTRQEKMNSISS*IQRSPR
Trigger: CCGAGGCGATCGCTGGATCCAGGATGAAATTGAGTT...CATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTGACCTTCCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp CCAGGGAATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGAGTCACGCACCACCTTaGTCATCCTCCGACCACCAG +
Preference number: 4 (lower is better)
Translates to: PGNESGYVQMRGSLAKALSHAPP*SSSDHQ
Trigger: CTGGTGGTCGGAGGATGACCAAGGTGGTGCGTGACT...CAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp CCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCATGATGGCCTCTCCATaGCCGTCCTTCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PENQGPGKRRWIWLTRGIMMASP*PSFCFS
Trigger: AGAGAAGCAGAAGGACGGCCATGGAGAGGCCATCAT...GATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp CAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCTTTGGGGAGCAGTTTaGGCACATGGTTTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: QGAARESRTRQEKMDMADLWGAV*AHGLLC
Trigger: ACACAGCAAACCATGTGCCCAAACTGCTCCCCAAAG...GTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp CTGGCTGTTGGGCTGGAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCCCTGAATCTGGCTGCTaGCGAACAAGTTCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: LAVGLEGRPGSLCVGSDVPESGC*RTSSCL
Trigger: TAGACAAGAACTTGTTCGCCAGCAGCCAGATTCAGG...GACATCAGATCCAACACATAAGGACCCTGGCCTACCCTCCAGCCCAACAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp CAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGCCTCTGGGACATGTCCTTaGGATCTTCCTTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: QECRPLNRKSWEGIIPPASGTCP*DLPCCR
Trigger: TCTACAGCAAGGAAGATCTCAAGGACATGTCCCAGA...GGCTGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR TCA 90 bp AATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCTTTACGAGCCACCCGTGTACTTaGCCACATGGTAGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: NQGPGKRRWIWLTRGIFTSHPCT*PHGRAS
Trigger: GGAAGCTCTACCATGTGGTCAAGTACACGGGTGGCT...CGTAAAGATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp GTGAATTTCAATGGGATAATCAAACCACCCCTAAGTTGGCAGCTGACCCAGAACGGTGGGGAAGAGCCATaGGTCCACGGGGGTATATCC +
Preference number: 4 (lower is better)
Translates to: VNFNGIIKPPLSWQLTQNGGEEP*VHGGIS
Trigger: GGATATACCCCCGTGGACTCATGGCTCTTCCCCACC...GTTCTGGGTCAGCTGCCAACTTAGGGGTGGTTTGATTATCCCATTGAAATTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp TTCCAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCACCTGGTCGATGGGAATaGTCCCTTCCTCGTCATAGT +
Preference number: 4 (lower is better)
Translates to: FQECRPLNRKSWEGIIPPPGRWE*SLPRHS
Trigger: ACTATGACGAGGAAGGGAGCATTCCCATCGACCAGG...TGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp CCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCGTCCGCAGGATCATCTaGGACATGTCCTTGAGATCT +
Preference number: 4 (lower is better)
Translates to: PENQGPGKRRWIWLTRGIVRRII*DMSLRS
Trigger: AGATCTCAAGGACATGTCCCAGATGATCCTGCGGAC...GATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp AATTGGGGGTGGCCACCTGGAAACCCTGAGGGAGATGTATTTGAAATGACGATGCACGTAGCCAAAATCTaGGCCCAGGAGCTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: NWGWPPGNPEGDVFEMTMHVAKI*AQELLH
Trigger: GTGAAGGAGCTCCTGGGCCCAGATTTTGGCTACGTG...CATCGTCATTTCAAATACATCTCCCTCAGGGTTTCCAGGTGGCCACCCCCAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp GTGAATTTCAATGGGATAATCAAACCACCCCTAAGTTGGCAGCTGACCCAGAACGCCGTTCACGGTCACTaGGGGACTGACCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: VNFNGIIKPPLSWQLTQNAVHGH*GTDLQV
Trigger: AACCTGGAGGTCAGTCCCCCAGTGACCGTGAACGGC...GTTCTGGGTCAGCTGCCAACTTAGGGGTGGTTTGATTATCCCATTGAAATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp AATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCTTTACGAAGGCTCTGGCACGGTaGTCCTCGTCCATCTTGAAC +
Preference number: 4 (lower is better)
Translates to: NQGPGKRRWIWLTRGIFTKALAR*SSSILN
Trigger: GTTCAAGATGGACGAGGACCACCGTGCCAGAGCCTT...CGTAAAGATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp AATTGGGGGTGGCCACCTGGAAACCCTGAGGGAGATGTATTTGAAATGACGATGTTCCTCCTCAACCTGTaGCCCGAATGGCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: NWGWPPGNPEGDVFEMTMFLLNL*PEWLGD
Trigger: ATCCCCAAGCCATTCGGGCCACAGGTTGAGGAGGAA...CATCGTCATTTCAAATACATCTCCCTCAGGGTTTCCAGGTGGCCACCCCCAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp CAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACACAAGTATGCTGGTCTaGGGAGAAATCCCCATGCAT +
Preference number: 4 (lower is better)
Translates to: QGAARESRTRQEKMDMADTSMLV*GEIPMH
Trigger: ATGCATGGGGATTTCTCCCCAGACCAGCATACTTGT...GTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp CTGGCTGTTGGGCTGGAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCCTGAGTCTTTTCAGTTaGAGCCAGGGAATGAATCTG +
Preference number: 4 (lower is better)
Translates to: LAVGLEGRPGSLCVGSDVLSLFS*SQGMNL
Trigger: CAGATTCATTCCCTGGCTCCAACTGAAAAGACTCAG...GACATCAGATCCAACACATAAGGACCCTGGCCTACCCTCCAGCCCAACAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp GATGGGTTCCATGCCAGTAGGGACCAGGTCCAGACTGCTACTAACCACTGTGTTTATAGAAAGTGGGGGTaGGGAAGAGCCATGAGTCCA +
Preference number: 4 (lower is better)
Translates to: DGFHASRDQVQTATNHCVYRKWG*GRAMSP
Trigger: TGGACTCATGGCTCTTCCCCACCCCCACTTTCTATA...AACACAGTGGTTAGTAGCAGTCTGGACCTGGTCCCTACTGGCATGGAACCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp AATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATCACTGGGTGGGCAAGTaGGATGGGAACGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: NESGYVQMRGSLAKALVNHWVGK*DGNGCV
Trigger: CACACACCCGTTCCCATCTCACTTGCCCACCCAGTG...ATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp CATGAGTCCACGGGGGTATATCCACACCGAGGGTTGTCACACTGGGTGGGCAAGTTTGGGCACATGGTTTaGTGTGTTTTGTTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: HESTGVYPHRGLSHWVGKFGHMV*CVLLCS
Trigger: AGAACACAACAAAACACAGCAAACCATGTGCCCAAA...CTTGCCCACCCAGTGTGACAACCCTCGGTGTGGATATACCCCCGTGGACTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp AAGGAGGAAGGTCAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGACACGTGGGGAAACCTaGTCAGATGAAATGTTTCCA +
Preference number: 4 (lower is better)
Translates to: KEEGQGAARESRTRQEKMTRGET*SDEMFP
Trigger: TGGAAACATTTCATCTGAGCAGGTTTCCCCACGTGT...CATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTGACCTTCCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp AAATCACACAAAGATATAAAGGCTAGCTTGATTTTCTTTCCAAGAGTGTCGGCCTTCAGGCTGAAGGTTTaGGCCCCGGCTGGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: KSHKDIKASLIFFPRVSAFRLKV*APAGAA
Trigger: CGCGGCCCCAGCCGGGGCCCAAACCTTCAGCCTGAA...GGCCGACACTCTTGGAAAGAAAATCAAGCTAGCCTTTATATCTTTGTGTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp AATTTGAAACTGTGTTCTTCTTGCCATCTTCACGACATCCCCTGCCCTCTTACACACGGCAGTCCTCCTTaGGCAACCAGGGTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: NLKLCSSCHLHDIPCPLTHGSPP*ATRVSL
Trigger: GAGAGACACCCTGGTTGCCCAAGGAGGACTGCCGTG...TGTAAGAGGGCAGGGGATGTCGTGAAGATGGCAAGAAGAACACAGTTTCAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp TTCCAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGTCCGCAGGATCATCTaGGACATGTCCTTGAGATCT +
Preference number: 4 (lower is better)
Translates to: FQECRPLNRKSWEGIIPPVRRII*DMSLRS
Trigger: AGATCTCAAGGACATGTCCCAGATGATCCTGCGGAC...TGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp GAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGCCTTCAGCTCACAGTTaGTTTTCTCCACAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: ERPENQGPGKRRWIWLTRPSAHS*FSPQGS
Trigger: AGAACCTTGTGGAGAAAACCAACTGTGAGCTGAAGG...CCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp CCAGGGAATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGGGCTACAGAGACACTaGCCCAGCTATTTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PGNESGYVQMRGSLAKALGLQRH*PSYFQQ
Trigger: CTGCTGAAAATAGCTGGGCCAGTGTCTCTGTAGCCC...CAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp GTGAATTTCAATGGGATAATCAAACCACCCCTAAGTTGGCAGCTGACCCAGAACTGGACCCTCAGGGAGTaGGGAGGACTAGCCAACAGT +
Preference number: 4 (lower is better)
Translates to: VNFNGIIKPPLSWQLTQNWTLRE*GGLANS
Trigger: ACTGTTGGCTAGTCCTCCCCACTCCCTGAGGGTCCA...GTTCTGGGTCAGCTGCCAACTTAGGGGTGGTTTGATTATCCCATTGAAATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp AATTTGAAACTGTGTTCTTCTTGCCATCTTCACGACATCCCCTGCCCTCTTACATGTACTCCAGCAGGCTaGCATGGATGGAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: NLKLCSSCHLHDIPCPLTCTPAG*HGWRPG
Trigger: GCCTGGTCTCCATCCATGTCAGCCTGCTGGAGTACA...TGTAAGAGGGCAGGGGATGTCGTGAAGATGGCAAGAAGAACACAGTTTCAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp CCAGGGAATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGAGGTTGGTAAGGAATaGATAATTGGGGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: PGNESGYVQMRGSLAKALEVGKE*IIGGGH
Trigger: GTGGCCACCCCCAATTATTCATTCCTTACCAACCTC...CAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATTCCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp AAATGTGGGCTTTGCATGTTGGGGAGTGATGGGTTCCATGCCAGTAGGGACCAGACACACACACACACATaGCAAACTCTAAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KCGLCMLGSDGFHASRDQTHTHT*QTLSLQ
Trigger: CTGGAGACTTAGAGTTTGTCATGTGTGTGTGTGTGT...CTGGTCCCTACTGGCATGGAACCCATCACTCCCCAACATGCAAAGCCCACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp AATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCTTTACGAAGTACAGGTTCTCCTaGACAAGGCTCTCGTTGGAC +
Preference number: 4 (lower is better)
Translates to: NQGPGKRRWIWLTRGIFTKYRFS*TRLSLD
Trigger: GTCCAACGAGAGCCTTGTGCAGGAGAACCTGTACTT...CGTAAAGATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp AATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCTTTACGGCTGGTCACTTATTATaGCCCTGGGAAGGCCTGAAT +
Preference number: 4 (lower is better)
Translates to: NQGPGKRRWIWLTRGIFTAGHLL*PWEGLN
Trigger: ATTCAGGCCTTCCCAGGGGCATAATAAGTGACCAGC...CGTAAAGATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp CCTAAATCACACAAAGATATAAAGGCTAGCTTGATTTTCTTTCCAAGAGTGTCGGCCTCGGTGCTCGCCTaGCTCATGGTGACCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PKSHKDIKASLIFFPRVSASVLA*LMVTRR
Trigger: CCTGCGGGTCACCATGAGCCAGGCGAGCACCGAGGC...CGACACTCTTGGAAAGAAAATCAAGCTAGCCTTTATATCTTTGTGTGATTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp GAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCCGGAGAGGAGGGGCTTGTCTGAGTCTGACATaGAAATGTACAGAACTATCT +
Preference number: 4 (lower is better)
Translates to: EGRPGSLCVGSDVRRGGACLSLT*KCTELS
Trigger: AGATAGTTCTGTACATTTCCATGTCAGACTCAGACA...AGCCCCTCCTCTCCGGACATCAGATCCAACACATAAGGACCCTGGCCTACCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp AATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCTTTACGGGCTGCTGGAAGAACTaGCAATCCCAGAATCTCCTT +
Preference number: 4 (lower is better)
Translates to: NQGPGKRRWIWLTRGIFTGCWKN*QSQNLL
Trigger: AAGGAGATTCTGGGATTGCCAGTTCTTCCAGCAGCC...CGTAAAGATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp AATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCTTTACGAGGTCACAAGTATGCTaGTCTGGGGAGAAATCCCCA +
Preference number: 4 (lower is better)
Translates to: NQGPGKRRWIWLTRGIFTRSQVC*SGEKSP
Trigger: TGGGGATTTCTCCCCAGACCAGCATACTTGTGACCT...CGTAAAGATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp GTGAATTTCAATGGGATAATCAAACCACCCCTAAGTTGGCAGCTGACCCAGAACCCAGGCAAGAGAAGATaGATATGGCTGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VNFNGIIKPPLSWQLTQNPGKRR*IWLTRG
Trigger: GCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGG...GTTCTGGGTCAGCTGCCAACTTAGGGGTGGTTTGATTATCCCATTGAAATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp CCAGGGAATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGACAACAGTGACTTGCTaGAAGTTTTGTGCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: PGNESGYVQMRGSLAKALTTVTC*KFCALR
Trigger: CCGCAGGGCACAAAACTTCCAGCAAGTCACTGTTGT...CAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATTCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp AATTGGGGGTGGCCACCTGGAAACCCTGAGGGAGATGTATTTGAAATGACGATGTCATTGGATGGGTACTaGCTAGGTAGATGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: NWGWPPGNPEGDVFEMTMSLDGY*LGRWEG
Trigger: CCCTTCCCATCTACCTAGCCAGTACCCATCCAATGA...CATCGTCATTTCAAATACATCTCCCTCAGGGTTTCCAGGTGGCCACCCCCAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CAA 72 bp AAGATGGATATGGCTGACCAGGGGCATCTTTACGCATaGAACTCTCAGGTCACAAGTATGCTGGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KMDMADQGHLYA*NSQVTSMLVWG
Trigger: TCCCCAGACCAGCATACTTGTGACCTGAGAGTTCAATGCGTAAAGATGCCCCTGGTCAGCCATATCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp GTGAATTTCAATGGGATAATCAAACCACCCCTAAGTTGGCAGCTGACCCAGAACCCGAGGTGCTGGCCATaGGTAGCAGGAATTTCTTTG +
Preference number: 4 (lower is better)
Translates to: VNFNGIIKPPLSWQLTQNPRCWP*VAGISL
Trigger: CAAAGAAATTCCTGCTACTCATGGCCAGCACCTCGG...GTTCTGGGTCAGCTGCCAACTTAGGGGTGGTTTGATTATCCCATTGAAATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp AAATGTGGGCTTTGCATGTTGGGGAGTGATGGGTTCCATGCCAGTAGGGACCAGATTTCACCACAACAGTaGCTTGCTGGAAGTTTTGTG +
Preference number: 4 (lower is better)
Translates to: KCGLCMLGSDGFHASRDQISPQQ*LAGSFV
Trigger: CACAAAACTTCCAGCAAGTCACTGTTGTGGTGAAAT...CTGGTCCCTACTGGCATGGAACCCATCACTCCCCAACATGCAAAGCCCACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp GTGAATTTCAATGGGATAATCAAACCACCCCTAAGTTGGCAGCTGACCCAGAACCCTGGTCGATGGGAATaGTCCCTTCCTCGTCATAGT +
Preference number: 4 (lower is better)
Translates to: VNFNGIIKPPLSWQLTQNPGRWE*SLPRHS
Trigger: ACTATGACGAGGAAGGGAGCATTCCCATCGACCAGG...GTTCTGGGTCAGCTGCCAACTTAGGGGTGGTTTGATTATCCCATTGAAATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp AATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCTTTACGTTTTCAGAGCATGGCTaGTGGAAGAACTGGCAATCC +
Preference number: 4 (lower is better)
Translates to: NQGPGKRRWIWLTRGIFTFSEHG*WKNWQS
Trigger: GGATTGCCAGTTCTTCCAGCAGCCATGCTCTGAAAA...CGTAAAGATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp CTTGATTTTCTTTCCAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAACCAGGATGCCTTCTTTaGGTTGTTCTTCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: LDFLSKSVGLLTGSRGREPGCLL*VVLLHH
Trigger: GTGGTGGAGAAGAACAACCCAAAGAAGGCATCCTGG...TTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTGGAAAGAAAATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp TTCCAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCACCTTCAGCTCACAGTTaGTTTTCTCCACAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: FQECRPLNRKSWEGIIPPPSAHS*FSPQGS
Trigger: AGAACCTTGTGGAGAAAACCAACTGTGAGCTGAAGG...TGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp GATGGGTTCCATGCCAGTAGGGACCAGGTCCAGACTGCTACTAACCACTGTGTTAGCAGTTTGGGCACATaGTTTGCTGTGTTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: DGFHASRDQVQTATNHCVSSLGT*FAVFCC
Trigger: ACAACAAAACACAGCAAACCATGTGCCCAAACTGCT...AACACAGTGGTTAGTAGCAGTCTGGACCTGGTCCCTACTGGCATGGAACCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp CCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCAGACTCAAAATTCTTTaGGGAGCAGTTTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: PENQGPGKRRWIWLTRGIRLKIL*GAVWAH
Trigger: ATGTGCCCAAACTGCTCCCCAAAGAATTTTGAGTCT...GATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp AATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATATATCACGGTGTCCGTaGAGATGGGAGTCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: NESGYVQMRGSLAKALVNISRCP*RWESGE
Trigger: TTCCCCTGACTCCCATCTTCACGGACACCGTGATAT...ATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp AATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATCAGAAATGTCGTCGATaGAGGTGCATTCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: NESGYVQMRGSLAKALVNQKCRR*RCIRGP
Trigger: TGGGCCTCGAATGCACCTTCATCGACGACATTTCTG...ATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp CCAGGGAATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGTTTAAATGTGGGCTTTaGATGTTGGGGAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: PGNESGYVQMRGSLAKALFKCGL*MLGSDG
Trigger: CCCATCACTCCCCAACATGCAAAGCCCACATTTAAA...CAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATTCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp AAATCACACAAAGATATAAAGGCTAGCTTGATTTTCTTTCCAAGAGTGTCGGCCAGCGCTGCTTGCCATTaGTGGCCACCTCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: KSHKDIKASLIFFPRVSASAACH*WPPPQP
Trigger: AGGCTGAGGAGGTGGCCACCAATGGCAAGCAGCGCT...GGCCGACACTCTTGGAAAGAAAATCAAGCTAGCCTTTATATCTTTGTGTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp CCTAAATCACACAAAGATATAAAGGCTAGCTTGATTTTCTTTCCAAGAGTGTCGGCCCCGCCTGGTCGATaGGAATGCTCCCTTCCTCGT +
Preference number: 4 (lower is better)
Translates to: PKSHKDIKASLIFFPRVSAPPGR*ECSLPR
Trigger: ACGAGGAAGGGAGCATTCCCATCGACCAGGCGGGGC...CGACACTCTTGGAAAGAAAATCAAGCTAGCCTTTATATCTTTGTGTGATTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp GTGAATTTCAATGGGATAATCAAACCACCCCTAAGTTGGCAGCTGACCCAGAACCCAGGATGCCTTCTTTaGGTTGTTCTTCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: VNFNGIIKPPLSWQLTQNPGCLL*VVLLHH
Trigger: GTGGTGGAGAAGAACAACCCAAAGAAGGCATCCTGG...GTTCTGGGTCAGCTGCCAACTTAGGGGTGGTTTGATTATCCCATTGAAATTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp GTGAATTTCAATGGGATAATCAAACCACCCCTAAGTTGGCAGCTGACCCAGAACCCTCGGTTTAGGTACTaGAAGCAGACCTTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VNFNGIIKPPLSWQLTQNPRFRY*KQTFSS
Trigger: TGAGCTGAAGGTCTGCTTCCAGTACCTAAACCGAGG...GTTCTGGGTCAGCTGCCAACTTAGGGGTGGTTTGATTATCCCATTGAAATTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp AATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATAAACCACCCCTAAGTTaGCAGCTGACCCAGAACTGG +
Preference number: 4 (lower is better)
Translates to: NESGYVQMRGSLAKALVNKPPLS*QLTQNW
Trigger: CCAGTTCTGGGTCAGCTGCCAACTTAGGGGTGGTTT...ATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp CTTGATTTTCTTTCCAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAACTTAACAGGAAGTCGTaGGAGGGAATAATTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LDFLSKSVGLLTGSRGRELNRKS*EGIIPP
Trigger: TGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAG...TTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTGGAAAGAAAATCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR TCA 90 bp GATGGGTTCCATGCCAGTAGGGACCAGGTCCAGACTGCTACTAACCACTGTGTTGAGATGTATTTGAAATaGCGATGGCAGTTCAAGATA +
Preference number: 4 (lower is better)
Translates to: DGFHASRDQVQTATNHCVEMYLK*RWQFKI
Trigger: TATCTTGAACTGCCATCGTCATTTCAAATACATCTC...AACACAGTGGTTAGTAGCAGTCTGGACCTGGTCCCTACTGGCATGGAACCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp AATTTGAAACTGTGTTCTTCTTGCCATCTTCACGACATCCCCTGCCCTCTTACACTGGGTATGTCCAAATaGGAGGGTCTTTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: NLKLCSSCHLHDIPCPLTLGMSK*EGLWQR
Trigger: CCTTTGCCAAAGACCCTCTCATTTGGACATACCCAG...TGTAAGAGGGCAGGGGATGTCGTGAAGATGGCAAGAAGAACACAGTTTCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp GATGGGTTCCATGCCAGTAGGGACCAGGTCCAGACTGCTACTAACCACTGTGTTGGAAATAATCCCAAATaGAAATCTTGTTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: DGFHASRDQVQTATNHCVGNNPK*KSCSSK
Trigger: CTTGGAGGAACAAGATTTTCATTTGGGATTATTTCC...AACACAGTGGTTAGTAGCAGTCTGGACCTGGTCCCTACTGGCATGGAACCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp CCTAAATCACACAAAGATATAAAGGCTAGCTTGATTTTCTTTCCAAGAGTGTCGCACTTGCTCCATGTGTaGGCAACCCAGGCCACCCCA +
Preference number: 4 (lower is better)
Translates to: PKSHKDIKASLIFFPRVSHLLHV*ATQATP
Trigger: TGGGGTGGCCTGGGTTGCTCACACATGGAGCAAGTG...CGACACTCTTGGAAAGAAAATCAAGCTAGCCTTTATATCTTTGTGTGATTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR GCA 90 bp AAATCACACAAAGATATAAAGGCTAGCTTGATTTTCTTTCCAAGAGTGTCGGCCCACACCATCCCGGTCTaGGTCCACATCCAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: KSHKDIKASLIFFPRVSAHTIPV*VHIQGD
Trigger: ATCTCCCTGGATGTGGACGCAGACCGGGATGGTGTG...GGCCGACACTCTTGGAAAGAAAATCAAGCTAGCCTTTATATCTTTGTGTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR GCA 90 bp AATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCTTTACGGGTAATTATCCTTCATaGAGCACACAAACACCGACA +
Preference number: 4 (lower is better)
Translates to: NQGPGKRRWIWLTRGIFTGNYPS*STQTPT
Trigger: TGTCGGTGTTTGTGTGCTGCATGAAGGATAATTACC...CGTAAAGATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp AATTTGAAACTGTGTTCTTCTTGCCATCTTCACGACATCCCCTGCCCTCTTACACTCAGGTCACAAGTATaGTGGTCTGGGGAGAAATCC +
Preference number: 4 (lower is better)
Translates to: NLKLCSSCHLHDIPCPLTLRSQV*WSGEKS
Trigger: GGATTTCTCCCCAGACCAGCATACTTGTGACCTGAG...TGTAAGAGGGCAGGGGATGTCGTGAAGATGGCAAGAAGAACACAGTTTCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp AATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATAGGCCTGAATCTGGCTaGTGGCGAACAAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: NESGYVQMRGSLAKALVNRPESG*WRTSSC
Trigger: ACAAGAACTTGTTCGCCAGCAGCCAGATTCAGGCCT...ATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp CCTAAATCACACAAAGATATAAAGGCTAGCTTGATTTTCTTTCCAAGAGTGTCGGCCGTTCACGGTCACTaGGGGACTGACCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: PKSHKDIKASLIFFPRVSAVHGH*GTDLQV
Trigger: AACCTGGAGGTCAGTCCCCCAGTGACCGTGAACGGC...CGACACTCTTGGAAAGAAAATCAAGCTAGCCTTTATATCTTTGTGTGATTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp AATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATTCTAAGCTAACTTACTaGACCCTCAGGGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: NESGYVQMRGSLAKALVNSKLTY*TLREWG
Trigger: TCCCCACTCCCTGAGGGTCCAGTAAGTTAGCTTAGA...ATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp AATTTGAAACTGTGTTCTTCTTGCCATCTTCACGACATCCCCTGCCCTCTTACATCTTGTCTAGCTGCCTaGACAGATGGCACCAGGAAT +
Preference number: 4 (lower is better)
Translates to: NLKLCSSCHLHDIPCPLTSCLAA*TDGTRN
Trigger: ATTCCTGGTGCCATCTGTCCAGGCAGCTAGACAAGA...TGTAAGAGGGCAGGGGATGTCGTGAAGATGGCAAGAAGAACACAGTTTCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CAA 72 bp TTTGGGGAGCAGTTTGGGCACATGGTTTGCTGTGTTTaGTTGTGTTCTGTTCCTTATGTCAGGGCTACAGAG +
Preference number: 4 (lower is better)
Translates to: FGEQFGHMVCCV*LCSVPYVRATE
Trigger: CTCTGTAGCCCTGACATAAGGAACAGAACACAACAAAACACAGCAAACCATGTGCCCAAACTGCTCCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp CCTAAATCACACAAAGATATAAAGGCTAGCTTGATTTTCTTTCCAAGAGTGTCGGGATGTTGGGGGTCATaGTCCACGGAGCAATCCGGA +
Preference number: 4 (lower is better)
Translates to: PKSHKDIKASLIFFPRVSGCWGS*STEQSG
Trigger: TCCGGATTGCTCCGTGGATCATGACCCCCAACATCC...CGACACTCTTGGAAAGAAAATCAAGCTAGCCTTTATATCTTTGTGTGATTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR TCA 90 bp CCTAAATCACACAAAGATATAAAGGCTAGCTTGATTTTCTTTCCAAGAGTGTCGCGGTCACTGGGGGACTaGCCTCCAGGTTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: PKSHKDIKASLIFFPRVSRSLGD*PPGFQM
Trigger: CATTTGGAAACCTGGAGGTCAGTCCCCCAGTGACCG...CGACACTCTTGGAAAGAAAATCAAGCTAGCCTTTATATCTTTGTGTGATTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR TCA 90 bp AATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATGTTGGAGCCAGGGAATaGATCTGGGTATGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: NESGYVQMRGSLAKALVNVGARE*IWVCPN
Trigger: ATTTGGACATACCCAGATTCATTCCCTGGCTCCAAC...ATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp GTGAATTTCAATGGGATAATCAAACCACCCCTAAGTTGGCAGCTGACCCAGAACAAGCAGGAACTTAGCTaGGTTTTGCAACAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: VNFNGIIKPPLSWQLTQNKQELS*VLQQRS
Trigger: GCTTCTCTGTTGCAAAACTCAGCTAAGTTCCTGCTT...GTTCTGGGTCAGCTGCCAACTTAGGGGTGGTTTGATTATCCCATTGAAATTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR GCA 90 bp CTTGATTTTCTTTCCAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAAGGTAATTATCCTTCATaGAGCACACAAACACCGACA +
Preference number: 4 (lower is better)
Translates to: LDFLSKSVGLLTGSRGREGNYPS*STQTPT
Trigger: TGTCGGTGTTTGTGTGCTGCATGAAGGATAATTACC...TTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTGGAAAGAAAATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR GCA 90 bp CCTAAATCACACAAAGATATAAAGGCTAGCTTGATTTTCTTTCCAAGAGTGTCGCAAGCGGGTATGTCTTaGCGTTCACGGTCACTGGGG +
Preference number: 4 (lower is better)
Translates to: PKSHKDIKASLIFFPRVSQAGMS*RSRSLG
Trigger: CCCCAGTGACCGTGAACGGCAAGACATACCCGCTTG...CGACACTCTTGGAAAGAAAATCAAGCTAGCCTTTATATCTTTGTGTGATTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp CCTAAATCACACAAAGATATAAAGGCTAGCTTGATTTTCTTTCCAAGAGTGTCGTCCAGCAGGCTGACATaGATGGAGACCAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PKSHKDIKASLIFFPRVSSSRLT*METRPE
Trigger: CTCAGGCCTGGTCTCCATCCATGTCAGCCTGCTGGA...CGACACTCTTGGAAAGAAAATCAAGCTAGCCTTTATATCTTTGTGTGATTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp AATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATTACTGGCTAGGTAGATaGGAAGGGGGCCTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: NESGYVQMRGSLAKALVNYWLGR*EGGLFK
Trigger: TTTAAACAGGCCCCCTTCCCATCTACCTAGCCAGTA...ATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp AATTTGAAACTGTGTTCTTCTTGCCATCTTCACGACATCCCCTGCCCTCTTACAAAGAGAAGATGGATATaGCTGACCAGGGGCATCTTT +
Preference number: 4 (lower is better)
Translates to: NLKLCSSCHLHDIPCPLTKRRWI*LTRGIF
Trigger: AAAGATGCCCCTGGTCAGCCATATCCATCTTCTCTT...TGTAAGAGGGCAGGGGATGTCGTGAAGATGGCAAGAAGAACACAGTTTCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR TCA 90 bp CCTAAATCACACAAAGATATAAAGGCTAGCTTGATTTTCTTTCCAAGAGTGTCGCCAAAAGAGAAACAGTaGCTTCCCCACTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: PKSHKDIKASLIFFPRVSPKEKQ*LPHSHS
Trigger: GCTGTGGGAGTGGGGAAGTCACTGTTTCTCTTTTGG...CGACACTCTTGGAAAGAAAATCAAGCTAGCCTTTATATCTTTGTGTGATTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR GCA 90 bp CCTAAATCACACAAAGATATAAAGGCTAGCTTGATTTTCTTTCCAAGAGTGTCGGCCCCAGGTCCAGGATaGCTTCTTTGGGTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: PKSHKDIKASLIFFPRVSAPGPG*LLWVVL
Trigger: AAGAACAACCCAAAGAAGGCATCCTGGACCTGGGGC...CGACACTCTTGGAAAGAAAATCAAGCTAGCCTTTATATCTTTGTGTGATTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR GCA 90 bp AATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATGGAAGTTTTGTGCCCTaGGGATTTCTGAATATAGTG +
Preference number: 4 (lower is better)
Translates to: NESGYVQMRGSLAKALVNGSFVP*GFLNIV
Trigger: CACTATATTCAGAAATCCGCAGGGCACAAAACTTCC...ATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp AAATCACACAAAGATATAAAGGCTAGCTTGATTTTCTTTCCAAGAGTGTCGGCCAACTCAATTTCATCCTaGATCCAGCGATCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: KSHKDIKASLIFFPRVSANSISS*IQRSPR
Trigger: CCGAGGCGATCGCTGGATCCAGGATGAAATTGAGTT...GGCCGACACTCTTGGAAAGAAAATCAAGCTAGCCTTTATATCTTTGTGTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CCA 90 bp GTGAATTTCAATGGGATAATCAAACCACCCCTAAGTTGGCAGCTGACCCAGAACACTGGTGAATTTCAATaGGATAATCAAACCACCCCT +
Preference number: 4 (lower is better)
Translates to: VNFNGIIKPPLSWQLTQNTGEFQ*DNQTTP
Trigger: AGGGGTGGTTTGATTATCCCATTGAAATTCACCAGT...GTTCTGGGTCAGCTGCCAACTTAGGGGTGGTTTGATTATCCCATTGAAATTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
3UTR CAA 72 bp TCTTTAGATCTCCACCACAGGCTCTTTTCCAGAAATTaGAAACTGTGTTCTTCTTGCCATCTTCACGACATC +
Preference number: 4 (lower is better)
Translates to: SLDLHHRLFSRN*KLCSSCHLHDI
Trigger: GATGTCGTGAAGATGGCAAGAAGAACACAGTTTCAAATTTCTGGAAAAGAGCCTGTGGTGGAGATCTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CCA 90 bp AAATCACACAAAGATATAAAGGCTAGCTTGATTTTCTTTCCAAGAGTGTCGGCCTGTCTGAGTCTGACATaGAAATGTACAGAACTATCT +
Preference number: 4 (lower is better)
Translates to: KSHKDIKASLIFFPRVSACLSLT*KCTELS
Trigger: AGATAGTTCTGTACATTTCCATGTCAGACTCAGACA...GGCCGACACTCTTGGAAAGAAAATCAAGCTAGCCTTTATATCTTTGTGTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS GCA 90 bp ACTGCAGCCGCACGGTCCGCTCGCGCAGCATCCTCCCCGCCGCAGTaGCCGCGCTCGCTGGTCCGGGGCGGCCGGGAGCACCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: TAAARSARAASSPPQ*PRSLVRGGREHLQQ
Trigger: CTGCTGCAGGTGCTCCCGGCCGCCCCGGACCAGCGAGCGCGGGCACTGCGGCGGGGAGGATGCTGCGCGAGCGGACCGTGCGGCTGCAGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS CCA 90 bp GGTCCGCTCGCGCAGCATCCTCCCCGCCGCAGTGCCCGCGCTCGCTaGTCCGGGGCGGCCGGGAGCACCTGCAGCAGGTGCGCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GPLAQHPPRRSARAR*SGAAGSTCSRCAFS
Trigger: GGAGAAGGCGCACCTGCTGCAGGTGCTCCCGGCCGCCCCGGACCAGCGAGCGCGGGCACTGCGGCGGGGAGGATGCTGCGCGAGCGGACC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS GCA 90 bp GGGCCCCGGCTGGGGCCGCGCTGTAGACATCGGTCCAGAGGTAGGTaGCCAGCACGTACACCGCCTCCACGCGGCTCCCGTACTGCAGCC +
Preference number: 5 (lower is better)
Translates to: GPRLGPRCRHRSRGR*PARTPPPRGSRTAA
Trigger: GGCTGCAGTACGGGAGCCGCGTGGAGGCGGTGTACGTGCTGGGCACCTACCTCTGGACCGATGTCTACAGCGCGGCCCCAGCCGGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS TCA 90 bp GTCAGCAGTGGGAAGGCACCCAAGGAGCACGGGGAGGCCCTGCGCTaGGGACCCAGTGCCTTGCCTGCTCATTGCCTCAGGCCTCCCATG +
Preference number: 5 (lower is better)
Translates to: VSSGKAPKEHGEALR*GPSALPAHCLRPPM
Trigger: CATGGGAGGCCTGAGGCAATGAGCAGGCAAGGCACTGGGTCCTCAGCGCAGGGCCTCCCCGTGCTCCTTGGGTGCCTTCCCACTGCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466151.1
ENST00000479534.5
CDS GCA 90 bp CAAGGAGCACGGGGAGGCCCTGCGCTGAGGACCCAGTGCCTTGCCTaGTCATTGCCTCAGGCCTCCCATGCCGAGTGGCAAAGGCTGACG +
Preference number: 5 (lower is better)
Translates to: QGARGGPALRTQCLA*SLPQASHAEWQRLT
Trigger: CGTCAGCCTTTGCCACTCGGCATGGGAGGCCTGAGGCAATGAGCAGGCAAGGCACTGGGTCCTCAGCGCAGGGCCTCCCCGTGCTCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466151.1
ENST00000479534.5
CDS GCA 90 bp CACCCAAGGAGCACGGGGAGGCCCTGCGCTGAGGACCCAGTGCCTTaGCTGCTCATTGCCTCAGGCCTCCCATGCCGAGTGGCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: HPRSTGRPCAEDPVP*LLIASGLPCRVAKA
Trigger: AGCCTTTGCCACTCGGCATGGGAGGCCTGAGGCAATGAGCAGGCAAGGCACTGGGTCCTCAGCGCAGGGCCTCCCCGTGCTCCTTGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466151.1
ENST00000479534.5
CDS GCA 90 bp GAAGGCACCCAAGGAGCACGGGGAGGCCCTGCGCTGAGGACCCAGTaGCTTGCCTGCTCATTGCCTCAGGCCTCCCATGCCGAGTGGCAA +
Preference number: 5 (lower is better)
Translates to: EGTQGARGGPALRTQ*LACSLPQASHAEWQ
Trigger: TTGCCACTCGGCATGGGAGGCCTGAGGCAATGAGCAGGCAAGGCACTGGGTCCTCAGCGCAGGGCCTCCCCGTGCTCCTTGGGTGCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466151.1
ENST00000479534.5
CDS TCA 90 bp CATCACGCACCACCTCCACCCACACGTGTTCCGAGTGCTTCAGGCTaGAGGTTTGGGCCCCGGCTGGGGCCGCGCTGTAGACATCGGTCC +
Preference number: 5 (lower is better)
Translates to: HHAPPPPTRVPSASG*RFGPRLGPRCRHRS
Trigger: GGACCGATGTCTACAGCGCGGCCCCAGCCGGGGCCCAAACCTTCAGCCTGAAGCACTCGGAACACGTGTGGGTGGAGGTGGTGCGTGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS GCA 90 bp GCTGAGGACCCAGTGCCTTGCCTGCTCATTGCCTCAGGCCTCCCATaGCGAGTGGCAAAGGCTGACGGGGAGGGTGTTCTCTGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: AEDPVPCLLIASGLP*RVAKADGEGVLCFR
Trigger: TCTGAAGCAGAGAACACCCTCCCCGTCAGCCTTTGCCACTCGGCATGGGAGGCCTGAGGCAATGAGCAGGCAAGGCACTGGGTCCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466151.1
ENST00000479534.5
CDS TCA 90 bp GGCCTTCCACGAAGAACAGCAGCTCCGCGGAGCCACCCGTGTACTTaGCCACATGGTAGAGCTTCCGCCGGCCCAGGATGTGGATATAGC +
Preference number: 5 (lower is better)
Translates to: GLPRRTAAPRSHPCT*PHGRASAGPGCGYS
Trigger: GCTATATCCACATCCTGGGCCGGCGGAAGCTCTACCATGTGGTCAAGTACACGGGTGGCTCCGCGGAGCTGCTGTTCTTCGTGGAAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS CCA 90 bp GGAGTCAGGGGAATGTCCTGGGCCATGTACTCCAGCAGGCTGACATaGATGGAGACCAGGCCTGAGAAGCCCTCGTCGGGGAAACAGAGG +
Preference number: 5 (lower is better)
Translates to: GVRGMSWAMYSSRLT*METRPEKPSSGKQR
Trigger: CCTCTGTTTCCCCGACGAGGGCTTCTCAGGCCTGGTCTCCATCCATGTCAGCCTGCTGGAGTACATGGCCCAGGACATTCCCCTGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS-3UTR CAA 90 bp GAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGCAGCGCTGCTTGCCATaGGTGGCCACCTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: ERPENQGPGKRRWIWLTRQRCLP*VATSSA
Trigger: GGCTGAGGAGGTGGCCACCAATGGCAAGCAGCGCTG...CCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp GAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCCGGAGAGGAGGGGCTCCAAGCGGGTATGTCTaGCCGTTCACGGTCACTGGG +
Preference number: 5 (lower is better)
Translates to: EGRPGSLCVGSDVRRGGAPSGYV*PFTVTG
Trigger: CCCAGTGACCGTGAACGGCAAGACATACCCGCTTGG...AGCCCCTCCTCTCCGGACATCAGATCCAACACATAAGGACCCTGGCCTACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS CCA 90 bp ACCCAGTGCCTTGCCTGCTCATTGCCTCAGGCCTCCCATGCCGAGTaGCAAAGGCTGACGGGGAGGGTGTTCTCTGCTTCAGAGGAATAT +
Preference number: 5 (lower is better)
Translates to: TQCLACSLPQASHAE*QRLTGRVFSASEEY
Trigger: ATATTCCTCTGAAGCAGAGAACACCCTCCCCGTCAGCCTTTGCCACTCGGCATGGGAGGCCTGAGGCAATGAGCAGGCAAGGCACTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466151.1
ENST00000479534.5
CDS-3UTR CAA 90 bp CAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGCCAGAAGCCAGCGCTGCTaGCCATTGGTGGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: QECRPLNRKSWEGIIPPARSQRC*PLVATS
Trigger: GGAGGTGGCCACCAATGGCAAGCAGCGCTGGCTTCT...GGCTGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CAA 90 bp GATGGGTTCCATGCCAGTAGGGACCAGGTCCAGACTGCTACTAACCACTGTGTTAGGCGGTCGGGGCCTTaGGTCCGCAGGATCATCTGG +
Preference number: 5 (lower is better)
Translates to: DGFHASRDQVQTATNHCVRRSGP*VRRIIW
Trigger: CCAGATGATCCTGCGGACCAAAGGCCCCGACCGCCT...AACACAGTGGTTAGTAGCAGTCTGGACCTGGTCCCTACTGGCATGGAACCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp CTTGATTTTCTTTCCAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAACTTCAGGCTGAAGGTTaGGGCCCCGGCTGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: LDFLSKSVGLLTGSRGRELQAEG*GPGWGR
Trigger: GCGGCCCCAGCCGGGGCCCAAACCTTCAGCCTGAAG...TTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTGGAAAGAAAATCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CAA 90 bp CTGGCTGTTGGGCTGGAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCTGGTCCTCGTCCATCTaGAACAGAGCGGGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: LAVGLEGRPGSLCVGSDVWSSSI*NRAGRS
Trigger: TGACCTGCCCGCTCTGTTCAAGATGGACGAGGACCA...GACATCAGATCCAACACATAAGGACCCTGGCCTACCCTCCAGCCCAACAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS GCA 90 bp GGATGCCTTCTTTGGGTTGTTCTTCTCCACCACACCATCCCGGTCTaGGTCCACATCCAGGGAGATCTCAATGGCTGTGAGGAAGAGCCC +
Preference number: 5 (lower is better)
Translates to: GCLLWVVLLHHTIPV*VHIQGDLNGCEEEP
Trigger: GGGCTCTTCCTCACAGCCATTGAGATCTCCCTGGATGTGGACGCAGACCGGGATGGTGTGGTGGAGAAGAACAACCCAAAGAAGGCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS-3UTR CAA 90 bp AAATGTGGGCTTTGCATGTTGGGGAGTGATGGGTTCCATGCCAGTAGGGACCAGGAGAGATCTGGGGCTTaGGCCTCCAAAGGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: KCGLCMLGSDGFHASRDQERSGA*ASKGRS
Trigger: GCTCCTGCCTTTGGAGGCCAAAGCCCCAGATCTCTC...CTGGTCCCTACTGGCATGGAACCCATCACTCCCCAACATGCAAAGCCCACATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS TCA 90 bp TTGCCTGCTCATTGCCTCAGGCCTCCCATGCCGAGTGGCAAAGGCTaGCGGGGAGGGTGTTCTCTGCTTCAGAGGAATATTTCTCACCTT +
Preference number: 5 (lower is better)
Translates to: LPAHCLRPPMPSGKG*RGGCSLLQRNISHL
Trigger: AAGGTGAGAAATATTCCTCTGAAGCAGAGAACACCCTCCCCGTCAGCCTTTGCCACTCGGCATGGGAGGCCTGAGGCAATGAGCAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466151.1
ENST00000479534.5
CDS GCA 90 bp AGCTCTTGCCCTCTGCTGGCAGGGGCGGGTAATATATTGGTTTGCTaGTACCCCATTCACTCCAGCCTCGGGAGGCTAGCTTACCTTTGT +
Preference number: 5 (lower is better)
Translates to: SSCPLLAGAGNILVC*YPIHSSLGRLAYLC
Trigger: ACAAAGGTAAGCTAGCCTCCCGAGGCTGGAGTGAATGGGGTAGCAGCAAACCAATATATTACCCGCCCCTGCCAGCAGAGGGCAAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466151.1
CDS GCA 90 bp TCTAGCTCTTGCCCTCTGCTGGCAGGGGCGGGTAATATATTGGTTTaGTGCTACCCCATTCACTCCAGCCTCGGGAGGCTAGCTTACCTT +
Preference number: 5 (lower is better)
Translates to: SSSCPLLAGAGNILV*CYPIHSSLGRLAYL
Trigger: AAGGTAAGCTAGCCTCCCGAGGCTGGAGTGAATGGGGTAGCAGCAAACCAATATATTACCCGCCCCTGCCAGCAGAGGGCAAGAGCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466151.1
CDS CCA 90 bp ACGGGTTCTCCACGTAGAACACGCCCACTTTGTCTGAGTCTGACATaGAAATGTACAGAACTATCTCGTATCCGGCGGGGAGGCGGTCGG +
Preference number: 5 (lower is better)
Translates to: TGSPRRTRPLCLSLT*KCTELSRIRRGGGR
Trigger: CCGACCGCCTCCCCGCCGGATACGAGATAGTTCTGTACATTTCCATGTCAGACTCAGACAAAGTGGGCGTGTTCTACGTGGAGAACCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS-3UTR CAA 90 bp AATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATCTTCAGGCTGAAGGTTaGGGCCCCGGCTGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: NESGYVQMRGSLAKALVNLQAEG*GPGWGR
Trigger: GCGGCCCCAGCCGGGGCCCAAACCTTCAGCCTGAAG...ATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp CTGGCTGTTGGGCTGGAGGGTAGGCCAGGGTCCTTATGTGTTGGATCTGATGTCATCCCACCCAAGCCTTaGAACATGATGGCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LAVGLEGRPGSLCVGSDVIPPKP*NMMASP
Trigger: TGGAGAGGCCATCATGTTCAAAGGCTTGGGTGGGAT...GACATCAGATCCAACACATAAGGACCCTGGCCTACCCTCCAGCCCAACAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp GAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGCAAACCACCCCTAAGTaGGCAGCTGACCCAGAACTG +
Preference number: 5 (lower is better)
Translates to: ERPENQGPGKRRWIWLTRQTTPK*AADPEL
Trigger: CAGTTCTGGGTCAGCTGCCAACTTAGGGGTGGTTTG...CCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS CCA 90 bp AGCACGATCATGTTCACCATGTTTGGGAAGAAGGCTCTGGCACGGTaGTCCTCGTCCATCTTGAACAGAGCGGGCAGGTCAATGATGTCC +
Preference number: 5 (lower is better)
Translates to: STIMFTMFGKKALAR*SSSILNRAGRSMMS
Trigger: GGACATCATTGACCTGCCCGCTCTGTTCAAGATGGACGAGGACCACCGTGCCAGAGCCTTCTTCCCAAACATGGTGAACATGATCGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375486.9
ENST00000466151.1
ENST00000479534.5
CDS-3UTR CAA 90 bp AAGGAGGAAGGTCAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGTAGCAGGAATTTCTTaGTGCCGGGGATGGGGACAA +
Preference number: 5 (lower is better)
Translates to: KEEGQGAARESRTRQEKMVAGIS*CRGWGQ
Trigger: TTGTCCCCATCCCCGGCACAAAGAAATTCCTGCTAC...CATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTGACCTTCCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp CAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACTTGATGGTGATTCGCTaGCTGCTCATCCCACCCAAG +
Preference number: 5 (lower is better)
Translates to: QGAARESRTRQEKMDMADLMVIR*LLIPPK
Trigger: CTTGGGTGGGATGAGCAGCAAGCGAATCACCATCAA...GTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp GATGGGTTCCATGCCAGTAGGGACCAGGTCCAGACTGCTACTAACCACTGTGTTGATGTGGATATAGCGTaGGCCGAAGAACGGGTTCTC +
Preference number: 5 (lower is better)
Translates to: DGFHASRDQVQTATNHCVDVDIA*AEERVL
Trigger: GAGAACCCGTTCTTCGGCCAACGCTATATCCACATC...AACACAGTGGTTAGTAGCAGTCTGGACCTGGTCCCTACTGGCATGGAACCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp AAATGTGGGCTTTGCATGTTGGGGAGTGATGGGTTCCATGCCAGTAGGGACCAGTCTTTGGGGAGCAGTTaGGGCACATGGTTTGCTGTG +
Preference number: 5 (lower is better)
Translates to: KCGLCMLGSDGFHASRDQSLGSS*GTWFAV
Trigger: CACAGCAAACCATGTGCCCAAACTGCTCCCCAAAGA...CTGGTCCCTACTGGCATGGAACCCATCACTCCCCAACATGCAAAGCCCACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS GCA 90 bp TTCCTCCTTCCTTTATGCTGTCGAGTTCCTCTAGCTCTTGCCCTCTaGTGGCAGGGGCGGGTAATATATTGGTTTGCTGCTACCCCATTC +
Preference number: 5 (lower is better)
Translates to: FLLPLCCRVPLALAL*WQGRVIYWFAATPF
Trigger: GAATGGGGTAGCAGCAAACCAATATATTACCCGCCCCTGCCAGCAGAGGGCAAGAGCTAGAGGAACTCGACAGCATAAAGGAAGGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466151.1
CDS GCA 90 bp AGCCTACTTCCTCCTTCCTTTATGCTGTCGAGTTCCTCTAGCTCTTaGCCTCTGCTGGCAGGGGCGGGTAATATATTGGTTTGCTGCTAC +
Preference number: 5 (lower is better)
Translates to: SLLPPSFMLSSSSSS*PLLAGAGNILVCCY
Trigger: GTAGCAGCAAACCAATATATTACCCGCCCCTGCCAGCAGAGGGCAAGAGCTAGAGGAACTCGACAGCATAAAGGAAGGAGGAAGTAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466151.1
CDS CCA 90 bp CTCCTTCCTTTATGCTGTCGAGTTCCTCTAGCTCTTGCCCTCTGCTaGCAGGGGCGGGTAATATATTGGTTTGCTGCTACCCCATTCACT +
Preference number: 5 (lower is better)
Translates to: LLPLCCRVPLALALC*QGRVIYWFAATPFT
Trigger: AGTGAATGGGGTAGCAGCAAACCAATATATTACCCGCCCCTGCCAGCAGAGGGCAAGAGCTAGAGGAACTCGACAGCATAAAGGAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466151.1
CDS CCA 90 bp CCTCAGCAATGTCACCAGATCAAGGCTCAGAGTCAAAGGTGGACTTaGACAGGACATCTCCAAGTTGCCAAGCAGCCACACAATTTGCAG +
Preference number: 5 (lower is better)
Translates to: PQQCHQIKAQSQRWT*TGHLQVAKQPHNLQ
Trigger: CTGCAAATTGTGTGGCTGCTTGGCAACTTGGAGATGTCCTGTCCAAGTCCACCTTTGACTCTGAGCCTTGATCTGGTGACATTGCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466151.1
ENST00000479534.5
CDS CCA 90 bp CCTCTACCTCAGCAATGTCACCAGATCAAGGCTCAGAGTCAAAGGTaGACTTGGACAGGACATCTCCAAGTTGCCAAGCAGCCACACAAT +
Preference number: 5 (lower is better)
Translates to: PLPQQCHQIKAQSQR*TWTGHLQVAKQPHN
Trigger: ATTGTGTGGCTGCTTGGCAACTTGGAGATGTCCTGTCCAAGTCCACCTTTGACTCTGAGCCTTGATCTGGTGACATTGCTGAGGTAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466151.1
ENST00000479534.5
CDS-3UTR CAA 90 bp GATGGGTTCCATGCCAGTAGGGACCAGGTCCAGACTGCTACTAACCACTGTGTTTGCACAAGGCTCTCGTaGGACAGAATCTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: DGFHASRDQVQTATNHCVCTRLS*DRILLM
Trigger: CATCAACAAGATTCTGTCCAACGAGAGCCTTGTGCA...AACACAGTGGTTAGTAGCAGTCTGGACCTGGTCCCTACTGGCATGGAACCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp CAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACTCCATGGATTCTACCTaGATTTTCAGAGCATGGCTG +
Preference number: 5 (lower is better)
Translates to: QGAARESRTRQEKMDMADSMDST*IFRAWL
Trigger: CAGCCATGCTCTGAAAATCAAGGTAGAATCCATGGA...GTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp AAATGTGGGCTTTGCATGTTGGGGAGTGATGGGTTCCATGCCAGTAGGGACCAGGGGCATCTTTACGCATaGAACTCTCAGGTCACAAGT +
Preference number: 5 (lower is better)
Translates to: KCGLCMLGSDGFHASRDQGHLYA*NSQVTS
Trigger: ACTTGTGACCTGAGAGTTCAATGCGTAAAGATGCCC...CTGGTCCCTACTGGCATGGAACCCATCACTCCCCAACATGCAAAGCCCACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp GAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGACTGAGTCTTTTCAGTaGGAGCCAGGGAATGAATCT +
Preference number: 5 (lower is better)
Translates to: ERPENQGPGKRRWIWLTRTESFQ*EPGNES
Trigger: AGATTCATTCCCTGGCTCCAACTGAAAAGACTCAGT...CCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp AATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCTTTACGTGTGGGCTTTGCATGTaGGGGAGTGATGGGTTCCAT +
Preference number: 5 (lower is better)
Translates to: NQGPGKRRWIWLTRGIFTCGLCM*GSDGFH
Trigger: ATGGAACCCATCACTCCCCAACATGCAAAGCCCACA...CGTAAAGATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp AAATCACACAAAGATATAAAGGCTAGCTTGATTTTCTTTCCAAGAGTGTCGGCCCAGCGCTGCTTGCCATaGGTGGCCACCTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: KSHKDIKASLIFFPRVSAQRCLP*VATSSA
Trigger: GGCTGAGGAGGTGGCCACCAATGGCAAGCAGCGCTG...GGCCGACACTCTTGGAAAGAAAATCAAGCTAGCCTTTATATCTTTGTGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CAA 90 bp AAATCACACAAAGATATAAAGGCTAGCTTGATTTTCTTTCCAAGAGTGTCGGCCAGGCGGTCGGGGCCTTaGGTCCGCAGGATCATCTGG +
Preference number: 5 (lower is better)
Translates to: KSHKDIKASLIFFPRVSARRSGP*VRRIIW
Trigger: CCAGATGATCCTGCGGACCAAAGGCCCCGACCGCCT...GGCCGACACTCTTGGAAAGAAAATCAAGCTAGCCTTTATATCTTTGTGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CAA 90 bp CTTGATTTTCTTTCCAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAAGATGTGGATATAGCGTaGGCCGAAGAACGGGTTCTC +
Preference number: 5 (lower is better)
Translates to: LDFLSKSVGLLTGSRGREDVDIA*AEERVL
Trigger: GAGAACCCGTTCTTCGGCCAACGCTATATCCACATC...TTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTGGAAAGAAAATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CAA 90 bp TTCCAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAACCTTCAGCTCACAGTaGGTTTTCTCCACAAGGTTC +
Preference number: 5 (lower is better)
Translates to: FQECRPLNRKSWEGIIPPTFSSQ*VFSTRF
Trigger: GAACCTTGTGGAGAAAACCAACTGTGAGCTGAAGGT...TGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CAA 90 bp AATTTGAAACTGTGTTCTTCTTGCCATCTTCACGACATCCCCTGCCCTCTTACAAAGTCACGCACCACCTaGGTCATCCTCCGACCACCA +
Preference number: 5 (lower is better)
Translates to: NLKLCSSCHLHDIPCPLTKSRTT*VILRPP
Trigger: TGGTGGTCGGAGGATGACCAAGGTGGTGCGTGACTT...TGTAAGAGGGCAGGGGATGTCGTGAAGATGGCAAGAAGAACACAGTTTCAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp AAATGTGGGCTTTGCATGTTGGGGAGTGATGGGTTCCATGCCAGTAGGGACCAGTTGGACAGAATCTTGTaGATGGTGATTCGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: KCGLCMLGSDGFHASRDQLDRIL*MVIRLL
Trigger: CAGCAAGCGAATCACCATCAACAAGATTCTGTCCAA...CTGGTCCCTACTGGCATGGAACCCATCACTCCCCAACATGCAAAGCCCACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp CCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCTCGTTGGACAGAATCTaGTTGATGGTGATTCGCTTG +
Preference number: 5 (lower is better)
Translates to: PENQGPGKRRWIWLTRGISLDRI*LMVIRL
Trigger: CAAGCGAATCACCATCAACAAGATTCTGTCCAACGA...GATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp AATTGGGGGTGGCCACCTGGAAACCCTGAGGGAGATGTATTTGAAATGACGATGTCATGTTCACCATGTTaGGGAAGAAGGCTCTGGCAC +
Preference number: 5 (lower is better)
Translates to: NWGWPPGNPEGDVFEMTMSCSPC*GRRLWH
Trigger: GTGCCAGAGCCTTCTTCCCAAACATGGTGAACATGA...CATCGTCATTTCAAATACATCTCCCTCAGGGTTTCCAGGTGGCCACCCCCAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp GATGGGTTCCATGCCAGTAGGGACCAGGTCCAGACTGCTACTAACCACTGTGTTGTTTGGGCACATGGTTaGCTGTGTTTTGTTGTGTTC +
Preference number: 5 (lower is better)
Translates to: DGFHASRDQVQTATNHCVVWAHG*LCFVVF
Trigger: GAACACAACAAAACACAGCAAACCATGTGCCCAAAC...AACACAGTGGTTAGTAGCAGTCTGGACCTGGTCCCTACTGGCATGGAACCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp AATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATTATCCACACCGAGGGTaGTCACACTGGGTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: NESGYVQMRGSLAKALVNYPHRG*SHWVGK
Trigger: CTTGCCCACCCAGTGTGACAACCCTCGGTGTGGATA...ATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS CCA 90 bp AACTCAATTTCATCCTGGATCCAGCGATCGCCTCGGTTTAGGTACTaGAAGCAGACCTTCAGCTCACAGTTGGTTTTCTCCACAAGGTTC +
Preference number: 5 (lower is better)
Translates to: NSISSWIQRSPRFRY*KQTFSSQLVFSTRF
Trigger: GAACCTTGTGGAGAAAACCAACTGTGAGCTGAAGGTCTGCTTCCAGTACCTAAACCGAGGCGATCGCTGGATCCAGGATGAAATTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS-3UTR CAA 90 bp GAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGTTTGCTGTGTTTTGTaGTGTTCTGTTCCTTATGTC +
Preference number: 5 (lower is better)
Translates to: ERPENQGPGKRRWIWLTRVCCVL*CSVPYV
Trigger: GACATAAGGAACAGAACACAACAAAACACAGCAAAC...CCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp AATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATCTGGCGAACAAGTTCTaGTCTAGCTGCCTGGACAGA +
Preference number: 5 (lower is better)
Translates to: NESGYVQMRGSLAKALVNLANKF*SSCLDR
Trigger: TCTGTCCAGGCAGCTAGACAAGAACTTGTTCGCCAG...ATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp AATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATCAGGGTCCTTATGTGTaGGATCTGATGTCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: NESGYVQMRGSLAKALVNQGPYV*DLMSGE
Trigger: CTCTCCGGACATCAGATCCAACACATAAGGACCCTG...ATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp CAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCTCTTTTCCAGAAATTaGAAACTGTGTTCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: QGAARESRTRQEKMDMADLFSRN*KLCSSC
Trigger: GCAAGAAGAACACAGTTTCAAATTTCTGGAAAAGAG...GTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp CAGGGAGCGGCCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACGGACCATTTATTTCATaGTTCTTTAGTCGAGCTCTT +
Preference number: 5 (lower is better)
Translates to: QGAARESRTRQEKMDMADGPFIS*FFSRAL
Trigger: AAGAGCTCGACTAAAGAACAATGAAATAAATGGTCC...GTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGGCCGCTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp AATGAATCTGGGTATGTCCAAATGAGAGGGTCTTTGGCAAAGGCACTGGTGAATTCCAGGATGCCTTCTTaGGGTTGTTCTTCTCCACCA +
Preference number: 5 (lower is better)
Translates to: NESGYVQMRGSLAKALVNSRMPS*GCSSPP
Trigger: TGGTGGAGAAGAACAACCCAAAGAAGGCATCCTGGA...ATTCACCAGTGCCTTTGCCAAAGACCCTCTCATTTGGACATACCCAGATTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp CCTAAATCACACAAAGATATAAAGGCTAGCTTGATTTTCTTTCCAAGAGTGTCGCCAAGCGGGTATGTCTaGCCGTTCACGGTCACTGGG +
Preference number: 5 (lower is better)
Translates to: PKSHKDIKASLIFFPRVSPSGYV*PFTVTG
Trigger: CCCAGTGACCGTGAACGGCAAGACATACCCGCTTGG...CGACACTCTTGGAAAGAAAATCAAGCTAGCCTTTATATCTTTGTGTGATTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CAA 90 bp GATGGGTTCCATGCCAGTAGGGACCAGGTCCAGACTGCTACTAACCACTGTGTTATGGTTTGCTGTGTTTaGTTGTGTTCTGTTCCTTAT +
Preference number: 5 (lower is better)
Translates to: DGFHASRDQVQTATNHCVMVCCV*LCSVPY
Trigger: ATAAGGAACAGAACACAACAAAACACAGCAAACCAT...AACACAGTGGTTAGTAGCAGTCTGGACCTGGTCCCTACTGGCATGGAACCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp CCAGAGAATCAAGGACCAGGCAAGAGAAGATGGATATGGCTGACCAGGGGCATCAAATTACCGACATCATaGGGGAAAGCCTTAGAAAAA +
Preference number: 5 (lower is better)
Translates to: PENQGPGKRRWIWLTRGIKLPTS*GKALEK
Trigger: TTTTTCTAAGGCTTTCCCCAATGATGTCGGTAATTT...GATGCCCCTGGTCAGCCATATCCATCTTCTCTTGCCTGGTCCTTGATTCTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp AATTTGAAACTGTGTTCTTCTTGCCATCTTCACGACATCCCCTGCCCTCTTACAACCTTCAGCTCACAGTaGGTTTTCTCCACAAGGTTC +
Preference number: 5 (lower is better)
Translates to: NLKLCSSCHLHDIPCPLTTFSSQ*VFSTRF
Trigger: GAACCTTGTGGAGAAAACCAACTGTGAGCTGAAGGT...TGTAAGAGGGCAGGGGATGTCGTGAAGATGGCAAGAAGAACACAGTTTCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375486.9
CDS-3UTR CAA 90 bp TTCCAAGAGTGTCGGCCTCTTAACAGGAAGTCGTGGGAGGGAATAATTCCCCCAGATATAAAGGCTAGCTaGATTTTCTTTCCAAGAGTG +
Preference number: 5 (lower is better)
Translates to: FQECRPLNRKSWEGIIPPDIKAS*IFFPRV
Trigger: CACTCTTGGAAAGAAAATCAAGCTAGCCTTTATATC...TGGGGGAATTATTCCCTCCCACGACTTCCTGTTAAGAGGCCGACACTCTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS-3UTR CAA 90 bp CCTAAATCACACAAAGATATAAAGGCTAGCTTGATTTTCTTTCCAAGAGTGTCGTCCAGGATGCCTTCTTaGGGTTGTTCTTCTCCACCA +
Preference number: 5 (lower is better)
Translates to: PKSHKDIKASLIFFPRVSSRMPS*GCSSPP
Trigger: TGGTGGAGAAGAACAACCCAAAGAAGGCATCCTGGA...CGACACTCTTGGAAAGAAAATCAAGCTAGCCTTTATATCTTTGTGTGATTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375481.1
CDS TCA 90 bp ATTTGCAGAGAATTTCCAGGGTATGAAGTTGTACCCATAAGAAAATaGAAGAACCTCTTTCCAGTGCCACAGGTGCATAACCTATTTCTC +
Preference number: 5 (lower is better)
Translates to: ICREFPGYEVVPIRK*KNLFPVPQVHNLFL
Trigger: GAGAAATAGGTTATGCACCTGTGGCACTGGAAAGAGGTTCTTTCATTTTCTTATGGGTACAACTTCATACCCTGGAAATTCTCTGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466151.1
ENST00000479534.5
CDS CCA 72 bp GCGCAGCATCCTCCCCGCCGCAGTGCCCGCGCTCGCTaGTCCGGGGCGGCCGGGAGCACCTGCAGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: AQHPPRRSARAR*SGAAGSTCSRC
Trigger: GCACCTGCTGCAGGTGCTCCCGGCCGCCCCGGACCAGCGAGCGCGGGCACTGCGGCGGGGAGGATGCTGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS GCA 72 bp CCCAGCACGTACACCGCCTCCACGCGGCTCCCGTACTaGAGCCGCACGGTCCGCTCGCGCAGCATCCTCCCC +
Preference number: 6 (lower is better)
Translates to: PSTYTASTRLPY*SRTVRSRSILP
Trigger: GGGGAGGATGCTGCGCGAGCGGACCGTGCGGCTGCAGTACGGGAGCCGCGTGGAGGCGGTGTACGTGCTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS CAA 90 bp GCACGGGGAGGCCCTGCGCTGAGGACCCAGTGCCTTGCCTGCTCATaGCCTCAGGCCTCCCATGCCGAGTGGCAAAGGCTGACGGGGAGG +
Preference number: 6 (lower is better)
Translates to: ARGGPALRTQCLACS*PQASHAEWQRLTGR
Trigger: CCTCCCCGTCAGCCTTTGCCACTCGGCATGGGAGGCCTGAGGCAATGAGCAGGCAAGGCACTGGGTCCTCAGCGCAGGGCCTCCCCGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466151.1
ENST00000479534.5
CDS GCA 72 bp CTGGGGCCGCGCTGTAGACATCGGTCCAGAGGTAGGTaGCCAGCACGTACACCGCCTCCACGCGGCTCCCGT +
Preference number: 6 (lower is better)
Translates to: LGPRCRHRSRGR*PARTPPPRGSR
Trigger: ACGGGAGCCGCGTGGAGGCGGTGTACGTGCTGGGCACCTACCTCTGGACCGATGTCTACAGCGCGGCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS GCA 72 bp CGGGGAGGCCCTGCGCTGAGGACCCAGTGCCTTGCCTaGTCATTGCCTCAGGCCTCCCATGCCGAGTGGCAA +
Preference number: 6 (lower is better)
Translates to: RGGPALRTQCLA*SLPQASHAEWQ
Trigger: TTGCCACTCGGCATGGGAGGCCTGAGGCAATGAGCAGGCAAGGCACTGGGTCCTCAGCGCAGGGCCTCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466151.1
ENST00000479534.5
CDS GCA 72 bp AGCACGGGGAGGCCCTGCGCTGAGGACCCAGTGCCTTaGCTGCTCATTGCCTCAGGCCTCCCATGCCGAGTG +
Preference number: 6 (lower is better)
Translates to: STGRPCAEDPVP*LLIASGLPCRV
Trigger: CACTCGGCATGGGAGGCCTGAGGCAATGAGCAGGCAAGGCACTGGGTCCTCAGCGCAGGGCCTCCCCGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466151.1
ENST00000479534.5
CDS GCA 72 bp CAAGGAGCACGGGGAGGCCCTGCGCTGAGGACCCAGTaGCTTGCCTGCTCATTGCCTCAGGCCTCCCATGCC +
Preference number: 6 (lower is better)
Translates to: QGARGGPALRTQ*LACSLPQASHA
Trigger: GGCATGGGAGGCCTGAGGCAATGAGCAGGCAAGGCACTGGGTCCTCAGCGCAGGGCCTCCCCGTGCTCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466151.1
ENST00000479534.5
CDS TCA 72 bp CCACCTCCACCCACACGTGTTCCGAGTGCTTCAGGCTaGAGGTTTGGGCCCCGGCTGGGGCCGCGCTGTAGA +
Preference number: 6 (lower is better)
Translates to: PPPPTRVPSASG*RFGPRLGPRCR
Trigger: TCTACAGCGCGGCCCCAGCCGGGGCCCAAACCTTCAGCCTGAAGCACTCGGAACACGTGTGGGTGGAGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS CAA 72 bp CACCCACACGTGTTCCGAGTGCTTCAGGCTGAAGGTTaGGGCCCCGGCTGGGGCCGCGCTGTAGACATCGGT +
Preference number: 6 (lower is better)
Translates to: HPHVFRVLQAEG*GPGWGRAVDIG
Trigger: ACCGATGTCTACAGCGCGGCCCCAGCCGGGGCCCAAACCTTCAGCCTGAAGCACTCGGAACACGTGTGGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS CAA 90 bp CACCACCTCCACCCACACGTGTTCCGAGTGCTTCAGGCTGAAGGTTaGGGCCCCGGCTGGGGCCGCGCTGTAGACATCGGTCCAGAGGTA +
Preference number: 6 (lower is better)
Translates to: HHLHPHVFRVLQAEG*GPGWGRAVDIGPEV
Trigger: TACCTCTGGACCGATGTCTACAGCGCGGCCCCAGCCGGGGCCCAAACCTTCAGCCTGAAGCACTCGGAACACGTGTGGGTGGAGGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS GCA 72 bp CCAGTGCCTTGCCTGCTCATTGCCTCAGGCCTCCCATaGCGAGTGGCAAAGGCTGACGGGGAGGGTGTTCTC +
Preference number: 6 (lower is better)
Translates to: PVPCLLIASGLP*RVAKADGEGVL
Trigger: GAGAACACCCTCCCCGTCAGCCTTTGCCACTCGGCATGGGAGGCCTGAGGCAATGAGCAGGCAAGGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466151.1
ENST00000479534.5
CDS TCA 72 bp CGAAGAACAGCAGCTCCGCGGAGCCACCCGTGTACTTaGCCACATGGTAGAGCTTCCGCCGGCCCAGGATGT +
Preference number: 6 (lower is better)
Translates to: RRTAAPRSHPCT*PHGRASAGPGC
Trigger: ACATCCTGGGCCGGCGGAAGCTCTACCATGTGGTCAAGTACACGGGTGGCTCCGCGGAGCTGCTGTTCTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS CCA 72 bp GGAATGTCCTGGGCCATGTACTCCAGCAGGCTGACATaGATGGAGACCAGGCCTGAGAAGCCCTCGTCGGGG +
Preference number: 6 (lower is better)
Translates to: GMSWAMYSSRLT*METRPEKPSSG
Trigger: CCCCGACGAGGGCTTCTCAGGCCTGGTCTCCATCCATGTCAGCCTGCTGGAGTACATGGCCCAGGACATTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS CAA 72 bp ACTATCTCGTATCCGGCGGGGAGGCGGTCGGGGCCTTaGGTCCGCAGGATCATCTGGGACATGTCCTTGAGA +
Preference number: 6 (lower is better)
Translates to: TISYPAGRRSGP*VRRIIWDMSLR
Trigger: TCTCAAGGACATGTCCCAGATGATCCTGCGGACCAAAGGCCCCGACCGCCTCCCCGCCGGATACGAGATAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS CAA 72 bp GTAGAGCTTCCGCCGGCCCAGGATGTGGATATAGCGTaGGCCGAAGAACGGGTTCTCCACGTAGAACACGCC +
Preference number: 6 (lower is better)
Translates to: VELPPAQDVDIA*AEERVLHVEHA
Trigger: GGCGTGTTCTACGTGGAGAACCCGTTCTTCGGCCAACGCTATATCCACATCCTGGGCCGGCGGAAGCTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS CCA 72 bp GCTCTTGCCCTCTGCTGGCAGGGGCGGGTAATATATTaGTTTGCTGCTACCCCATTCACTCCAGCCTCGGGA +
Preference number: 6 (lower is better)
Translates to: ALALCWQGRVIY*FAATPFTPASG
Trigger: TCCCGAGGCTGGAGTGAATGGGGTAGCAGCAAACCAATATATTACCCGCCCCTGCCAGCAGAGGGCAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466151.1
CDS CAA 72 bp GGGAAGAAGGCTCTGGCACGGTGGTCCTCGTCCATCTaGAACAGAGCGGGCAGGTCAATGATGTCCTGCTCT +
Preference number: 6 (lower is better)
Translates to: GKKALARWSSSI*NRAGRSMMSCS
Trigger: AGAGCAGGACATCATTGACCTGCCCGCTCTGTTCAAGATGGACGAGGACCACCGTGCCAGAGCCTTCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375486.9
ENST00000466151.1
ENST00000479534.5
CDS CAA 72 bp AGCTCTTGCCCTCTGCTGGCAGGGGCGGGTAATATATaGGTTTGCTGCTACCCCATTCACTCCAGCCTCGGG +
Preference number: 6 (lower is better)
Translates to: SSCPLLAGAGNI*VCCYPIHSSLG
Trigger: CCCGAGGCTGGAGTGAATGGGGTAGCAGCAAACCAATATATTACCCGCCCCTGCCAGCAGAGGGCAAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466151.1
CDS CAA 90 bp ATGTACAGAACTATCTCGTATCCGGCGGGGAGGCGGTCGGGGCCTTaGGTCCGCAGGATCATCTGGGACATGTCCTTGAGATCTTCCTTG +
Preference number: 6 (lower is better)
Translates to: MYRTISYPAGRRSGP*VRRIIWDMSLRSSL
Trigger: CAAGGAAGATCTCAAGGACATGTCCCAGATGATCCTGCGGACCAAAGGCCCCGACCGCCTCCCCGCCGGATACGAGATAGTTCTGTACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS CAA 90 bp ACCATGTTTGGGAAGAAGGCTCTGGCACGGTGGTCCTCGTCCATCTaGAACAGAGCGGGCAGGTCAATGATGTCCTGCTCTGTCAGTCCC +
Preference number: 6 (lower is better)
Translates to: TMFGKKALARWSSSI*NRAGRSMMSCSVSP
Trigger: GGGACTGACAGAGCAGGACATCATTGACCTGCCCGCTCTGTTCAAGATGGACGAGGACCACCGTGCCAGAGCCTTCTTCCCAAACATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375486.9
ENST00000466151.1
ENST00000479534.5
CDS TCA 72 bp CATTGCCTCAGGCCTCCCATGCCGAGTGGCAAAGGCTaGCGGGGAGGGTGTTCTCTGCTTCAGAGGAATATT +
Preference number: 6 (lower is better)
Translates to: HCLRPPMPSGKG*RGGCSLLQRNI
Trigger: AATATTCCTCTGAAGCAGAGAACACCCTCCCCGTCAGCCTTTGCCACTCGGCATGGGAGGCCTGAGGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466151.1
ENST00000479534.5
CDS GCA 72 bp CTTTGGGTTGTTCTTCTCCACCACACCATCCCGGTCTaGGTCCACATCCAGGGAGATCTCAATGGCTGTGAG +
Preference number: 6 (lower is better)
Translates to: LWVVLLHHTIPV*VHIQGDLNGCE
Trigger: CTCACAGCCATTGAGATCTCCCTGGATGTGGACGCAGACCGGGATGGTGTGGTGGAGAAGAACAACCCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS GCA 72 bp CCTTTATGCTGTCGAGTTCCTCTAGCTCTTGCCCTCTaGTGGCAGGGGCGGGTAATATATTGGTTTGCTGCT +
Preference number: 6 (lower is better)
Translates to: PLCCRVPLALAL*WQGRVIYWFAA
Trigger: AGCAGCAAACCAATATATTACCCGCCCCTGCCAGCAGAGGGCAAGAGCTAGAGGAACTCGACAGCATAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466151.1
CDS GCA 72 bp CCTCCTTCCTTTATGCTGTCGAGTTCCTCTAGCTCTTaGCCTCTGCTGGCAGGGGCGGGTAATATATTGGTT +
Preference number: 6 (lower is better)
Translates to: PPSFMLSSSSSS*PLLAGAGNILV
Trigger: AACCAATATATTACCCGCCCCTGCCAGCAGAGGGCAAGAGCTAGAGGAACTCGACAGCATAAAGGAAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466151.1
CDS CCA 72 bp TCATCCTGGATCCAGCGATCGCCTCGGTTTAGGTACTaGAAGCAGACCTTCAGCTCACAGTTGGTTTTCTCC +
Preference number: 6 (lower is better)
Translates to: SSWIQRSPRFRY*KQTFSSQLVFS
Trigger: GGAGAAAACCAACTGTGAGCTGAAGGTCTGCTTCCAGTACCTAAACCGAGGCGATCGCTGGATCCAGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS CAA 90 bp TCTAGGCAGCGCTGGAAGTACAGGTTCTCCTGCACAAGGCTCTCGTaGGACAGAATCTTGTTGATGGTGATTCGCTTGCTGCTCATCCCA +
Preference number: 6 (lower is better)
Translates to: SRQRWKYRFSCTRLS*DRILLMVIRLLLIP
Trigger: TGGGATGAGCAGCAAGCGAATCACCATCAACAAGATTCTGTCCAACGAGAGCCTTGTGCAGGAGAACCTGTACTTCCAGCGCTGCCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375486.9
ENST00000466151.1
ENST00000479534.5
CDS CAA 90 bp TGGAAGTACAGGTTCTCCTGCACAAGGCTCTCGTTGGACAGAATCTaGTTGATGGTGATTCGCTTGCTGCTCATCCCACCCAAGCCTTTG +
Preference number: 6 (lower is better)
Translates to: WKYRFSCTRLSLDRI*LMVIRLLLIPPKPL
Trigger: CAAAGGCTTGGGTGGGATGAGCAGCAAGCGAATCACCATCAACAAGATTCTGTCCAACGAGAGCCTTGTGCAGGAGAACCTGTACTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375486.9
ENST00000466151.1
ENST00000479534.5
CDS GCA 72 bp TTCCAGTCTAGGCAGCGCTGGAAGTACAGGTTCTCCTaGACAAGGCTCTCGTTGGACAGAATCTTGTTGATG +
Preference number: 6 (lower is better)
Translates to: FQSRQRWKYRFS*TRLSLDRILLM
Trigger: CATCAACAAGATTCTGTCCAACGAGAGCCTTGTGCAGGAGAACCTGTACTTCCAGCGCTGCCTAGACTGGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375486.9
ENST00000466151.1
ENST00000479534.5
CDS CCA 72 bp CCACGTAGAACACGCCCACTTTGTCTGAGTCTGACATaGAAATGTACAGAACTATCTCGTATCCGGCGGGGA +
Preference number: 6 (lower is better)
Translates to: PRRTRPLCLSLT*KCTELSRIRRG
Trigger: TCCCCGCCGGATACGAGATAGTTCTGTACATTTCCATGTCAGACTCAGACAAAGTGGGCGTGTTCTACGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9
CDS CAA 72 bp TTCTCCTGCACAAGGCTCTCGTTGGACAGAATCTTGTaGATGGTGATTCGCTTGCTGCTCATCCCACCCAAG +
Preference number: 6 (lower is better)
Translates to: FSCTRLSLDRIL*MVIRLLLIPPK
Trigger: CTTGGGTGGGATGAGCAGCAAGCGAATCACCATCAACAAGATTCTGTCCAACGAGAGCCTTGTGCAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375486.9
ENST00000466151.1
ENST00000479534.5
CDS CAA 72 bp CGCTGGAAGTACAGGTTCTCCTGCACAAGGCTCTCGTaGGACAGAATCTTGTTGATGGTGATTCGCTTGCTG +
Preference number: 6 (lower is better)
Translates to: RWKYRFSCTRLS*DRILLMVIRLL
Trigger: CAGCAAGCGAATCACCATCAACAAGATTCTGTCCAACGAGAGCCTTGTGCAGGAGAACCTGTACTTCCAGCG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375486.9
ENST00000466151.1
ENST00000479534.5
CDS CAA 90 bp AAGTACAGGTTCTCCTGCACAAGGCTCTCGTTGGACAGAATCTTGTaGATGGTGATTCGCTTGCTGCTCATCCCACCCAAGCCTTTGAAC +
Preference number: 6 (lower is better)
Translates to: KYRFSCTRLSLDRIL*MVIRLLLIPPKPLN
Trigger: GTTCAAAGGCTTGGGTGGGATGAGCAGCAAGCGAATCACCATCAACAAGATTCTGTCCAACGAGAGCCTTGTGCAGGAGAACCTGTACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375486.9
ENST00000466151.1
ENST00000479534.5
CDS CAA 90 bp ACCTCAGCAATGTCACCAGATCAAGGCTCAGAGTCAAAGGTGGACTaGGACAGGACATCTCCAAGTTGCCAAGCAGCCACACAATTTGCA +
Preference number: 6 (lower is better)
Translates to: TSAMSPDQGSESKVD*DRTSPSCQAATQFA
Trigger: TGCAAATTGTGTGGCTGCTTGGCAACTTGGAGATGTCCTGTCCAAGTCCACCTTTGACTCTGAGCCTTGATCTGGTGACATTGCTGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466151.1
ENST00000479534.5
CDS GCA 72 bp GAGTCAAAGGTGGACTTGGACAGGACATCTCCAAGTTaGCAAGCAGCCACACAATTTGCAGAGAATTTCCAG +
Preference number: 6 (lower is better)
Translates to: ESKVDLDRTSPS*QAATQFAENFQ
Trigger: CTGGAAATTCTCTGCAAATTGTGTGGCTGCTTGGCAACTTGGAGATGTCCTGTCCAAGTCCACCTTTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466151.1
ENST00000479534.5
CDS CAA 72 bp CGGTTTAGGTACTGGAAGCAGACCTTCAGCTCACAGTaGGTTTTCTCCACAAGGTTCTTCACCTCTTTCAGG +
Preference number: 6 (lower is better)
Translates to: RFRYWKQTFSSQ*VFSTRFFTSFR
Trigger: CCTGAAAGAGGTGAAGAACCTTGTGGAGAAAACCAACTGTGAGCTGAAGGTCTGCTTCCAGTACCTAAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375481.1
ENST00000375486.9