RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PACSIN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000165912

Ensembl transcript IDs: ENST00000298838.11, ENST00000524509.1, ENST00000525725.5, ENST00000528201.1, ENST00000528462.5, ENST00000530405.5, ENST00000530513.5, ENST00000531226.5, ENST00000532457.5, ENST00000533686.5, ENST00000539589.5

Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCAGGCACCCCTGAACGCTTCTGTCACCTCTGACCTCCCATCTTaGCCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTA +
Preference number: 1 (lower is better)
Translates to: AQAPLNASVTSDLPS*PQPRLVPSLPVPSL
Trigger: TAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGGGCAAGATGGGAGGTCAGAGGTGACAGAAGCGTTCAGGGGTGCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
3UTR CCA 90 bp CTTCCTGGCCAGCGTAGTCATAGAGTGCCCTCACCCGAACCCCGGTaGCAGCCTTCCGGGGACTCTCTTCATCTGACCACTCCTCATCCT +
Preference number: 1 (lower is better)
Translates to: LPGQRSHRVPSPEPR*QPSGDSLHLTTPHP
Trigger: AGGATGAGGAGTGGTCAGATGAAGAGAGTCCCCGGAAGGCTGCCACCGGGGTTCGGGTGAGGGCACTCTATGACTACGCTGGCCAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532457.5
3UTR-3UTR TCA 90 bp GACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCGACGGTTCAGGGCCCTaGGGGTCCGGCTCTCCAGGA +
Preference number: 2 (lower is better)
Translates to: DRGAARERRFRALRVRLSDGSGP*GSGSPG
Trigger: TCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTC...GGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000533686.5
ENST00000539589.5
3UTR-3UTR GCA 90 bp AGCTTCCTGGCCAGCGTAGTCATAGAGTGCCCTCACCCGAACCCCGGTGGCAGCGGACTGGGGTGGGGGTaGGGTGCCATCTCTTGTAGG +
Preference number: 2 (lower is better)
Translates to: SFLASVVIECPHPNPGGSGLGWG*GAISCR
Trigger: CCTACAAGAGATGGCACCGCACCCCCACCCCAGTCC...GCTGCCACCGGGGTTCGGGTGAGGGCACTCTATGACTACGCTGGCCAGGAAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532457.5
3UTR-3UTR GCA 90 bp CTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGCAGGGTACAGGCCAATaGGGCCACTCTGCAACTGGC +
Preference number: 2 (lower is better)
Translates to: LKGQRSSQRATVQGPEGPQGTGQ*GHSATG
Trigger: GCCAGTTGCAGAGTGGCCGCATTGGCCTGTACCCTG...CGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532457.5
ENST00000533686.5
3UTR-3UTR TCA 90 bp CTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGGAGAAGCTGGGCTCTaGACCAGGGTGGGTAAACGT +
Preference number: 2 (lower is better)
Translates to: LKGQRSSQRATVQGPEGPGEAGL*TRVGKR
Trigger: ACGTTTACCCACCCTGGTTCAGAGCCCAGCTTCTCC...CGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000533686.5
ENST00000539589.5
3UTR-3UTR TCA 90 bp CCTGGGTCCCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGAGAAGCTGGGCTCTaGACCAGGGTGGGTAAACGT +
Preference number: 2 (lower is better)
Translates to: PGSQDFLPQGTEEQPESDGEAGL*TRVGKR
Trigger: ACGTTTACCCACCCTGGTTCAGAGCCCAGCTTCTCC...GTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGGGACCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
3UTR-3UTR TCA 90 bp CTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGGGAGAAGCTGGGCTCTaGACCAGGGTGGGTAAACGT +
Preference number: 2 (lower is better)
Translates to: LPPSRDRGAARERRFRALGEAGL*TRVGKR
Trigger: ACGTTTACCCACCCTGGTTCAGAGCCCAGCTTCTCC...CAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
3UTR-3UTR TCA 90 bp CTGGGTCCCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGGAGAAGCTGGGCTCTaGACCAGGGTGGGTAAACGT +
Preference number: 2 (lower is better)
Translates to: LGPRTSSLKGQRSSQRATGEAGL*TRVGKR
Trigger: ACGTTTACCCACCCTGGTTCAGAGCCCAGCTTCTCC...CGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGGGACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
3UTR-3UTR GCA 90 bp CTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGAGGGTGGGTAAACGTTaGAGAAGGGCTGTCAGGACA +
Preference number: 2 (lower is better)
Translates to: LKGQRSSQRATVQGPEGPRVGKR*RRAVRT
Trigger: TGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCT...CGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000533686.5
ENST00000539589.5
3UTR-3UTR GCA 90 bp CTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGTCTGACCTCCCATCTTaGCCTCAGCCTAGACTCGTC +
Preference number: 2 (lower is better)
Translates to: LPPSRDRGAARERRFRALSDLPS*PQPRLV
Trigger: GACGAGTCTAGGCTGAGGGCAAGATGGGAGGTCAGA...CAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
3UTR-3UTR TCA 90 bp AAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGCCCACCCCAGGAACCCGCTTCTGTCACCTCTaGCCTCCCATCTTGCCCTCA +
Preference number: 2 (lower is better)
Translates to: KRVLLGQNYTHPKPTPGTRFCHL*PPILPS
Trigger: TGAGGGCAAGATGGGAGGTCAGAGGTGACAGAAGCG...GGTTCCTGGGGTGGGCTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
3UTR-3UTR GCA 90 bp GTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCTCCCCTCCCTGGGTCAGGGTGGGTAAACGTTaGAGAAGGGCTGTCAGGACA +
Preference number: 2 (lower is better)
Translates to: VPSLPVPSLDKGPSPPWVRVGKR*RRAVRT
Trigger: TGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCT...GACCCAGGGAGGGGAGGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
3UTR-3UTR GCA 90 bp CTGGGTCCCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGAGGGTGGGTAAACGTTaGAGAAGGGCTGTCAGGACA +
Preference number: 2 (lower is better)
Translates to: LGPRTSSLKGQRSSQRATRVGKR*RRAVRT
Trigger: TGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCT...CGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGGGACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
3UTR-3UTR TCA 90 bp AAGCTGGGCTCTGAACCAGGGTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACCGCTTCTGTCACCTCTaGCCTCCCATCTTGCCCTCA +
Preference number: 2 (lower is better)
Translates to: KLGSEPGWVNVAEGLSGHRFCHL*PPILPS
Trigger: TGAGGGCAAGATGGGAGGTCAGAGGTGACAGAAGCG...GTGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCTGGTTCAGAGCCCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
3UTR-3UTR GCA 90 bp AAGCTGGGCTCTGAACCAGGGTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACAGGGTGGGTAAACGTTaGAGAAGGGCTGTCAGGACA +
Preference number: 2 (lower is better)
Translates to: KLGSEPGWVNVAEGLSGHRVGKR*RRAVRT
Trigger: TGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCT...GTGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCTGGTTCAGAGCCCAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000533686.5
ENST00000539589.5
3UTR GCA 72 bp CAGCTCATCAGCTTCCTGGCCAGCGTAGTCATAGAGTaGCCTCACCCGAACCCCGGTGGCAGCCTTCCGGGG +
Preference number: 3 (lower is better)
Translates to: QLISFLASVVIE*PHPNPGGSLPG
Trigger: CCCCGGAAGGCTGCCACCGGGGTTCGGGTGAGGGCACTCTATGACTACGCTGGCCAGGAAGCTGATGAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532457.5
3UTR CCA 72 bp CAGCGTAGTCATAGAGTGCCCTCACCCGAACCCCGGTaGCAGCCTTCCGGGGACTCTCTTCATCTGACCACT +
Preference number: 3 (lower is better)
Translates to: QRSHRVPSPEPR*QPSGDSLHLTT
Trigger: AGTGGTCAGATGAAGAGAGTCCCCGGAAGGCTGCCACCGGGGTTCGGGTGAGGGCACTCTATGACTACGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR CCA 90 bp GGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCGCCATGCCTGGCCCGTaGGTGCTGCGCCACCAGCGC +
Preference number: 4 (lower is better)
Translates to: GQRSSQRATVQGPEGPALAMPGP*VLRHQR
Trigger: GCGCTGGTGGCGCAGCACCCACGGGCCAGGCATGGC...GAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000533686.5
ENST00000539589.5
CDS-3UTR GCA 90 bp AGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGTCCCGCACCTCCAGGTaGAGCGCGCTCAGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: RSSQRATVQGPEGPALQESRTSR*SALSRS
Trigger: TGAGCGGCTGAGCGCGCTGCACCTGGAGGTGCGGGA...CTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp AGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGTGCCTGGCCCGTGGGTaGTGCGCCACCAGCGCAGAT +
Preference number: 4 (lower is better)
Translates to: RSSQRATVQGPEGPALQECLARG*CATSAD
Trigger: ATCTGCGCTGGTGGCGCAGCACCCACGGGCCAGGCA...CTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000533686.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CCTGGGTCCCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGCCATGCCTGGCCCGTaGGTGCTGCGCCACCAGCGC +
Preference number: 4 (lower is better)
Translates to: PGSQDFLPQGTEEQPESDAMPGP*VLRHQR
Trigger: GCGCTGGTGGCGCAGCACCCACGGGCCAGGCATGGC...GTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGGGACCCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp TCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGTCCCCGCACAGCCGGTaGCCGTCCTCCACCCGCTGT +
Preference number: 4 (lower is better)
Translates to: SSLKGQRSSQRATVQGPESPHSR*PSSTRC
Trigger: ACAGCGGGTGGAGGACGGGCACCGGCTGTGCGGGGA...CTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGCTGGCCCGTGGGTGCTaGGCCACCAGCGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: LKGQRSSQRATVQGPEGPLARGC*ATSADP
Trigger: AGGATCTGCGCTGGTGGCGCAGCACCCACGGGCCAG...CGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000533686.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCGCAGCACGGAATGGTaGCGGATTTGGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GQRSSQRATVQGPEGPALRSTEW*RIWGWG
Trigger: GCCCCAGCCCCAAATCCGCCACCATTCCGTGCTGCG...GAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCGTTCATGGCCATGCCTaGCCCGTGGGTGCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: GQRSSQRATVQGPEGPALVHGHA*PVGAAP
Trigger: TGGCGCAGCACCCACGGGCCAGGCATGGCCATGAAC...GAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000533686.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCCGGCCACTCTGCAACTaGCCTTGGCACCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: DRGAARERRFRALRVRLSRPLCN*PWHQPC
Trigger: GCAGGGCTGGTGCCAAGGCCAGTTGCAGAGTGGCCG...GGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000533686.5
ENST00000539589.5
CDS-3UTR CCA 90 bp AGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGATAACTCGGAGCCCGTaGAGCCACGCGGAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RSSQRATVQGPEGPALQEITRSP*SHAERQ
Trigger: CTGCCGCTCCGCGTGGCTCCACGGGCTCCGAGTTAT...CTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539589.5
CDS-3UTR TCA 90 bp GGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCTCAATGCTGCCACCGTaGCTCTGCCGCGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: GQRSSQRATVQGPEGPALSMLPP*LCRVLP
Trigger: AGGGAGGACGCGGCAGAGTCACGGTGGCAGCATTGA...GAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298838.11
ENST00000532457.5
CDS-3UTR TCA 90 bp CCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGCCGCTCAGCCGCCGTaGAAAAGGCATGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PPSRDRGAARERRFRALRAAQPP*KRHARP
Trigger: AGGCCTGGCATGCCTTTTTCACGGCGGCTGAGCGGC...CCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR TCA 90 bp TCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTGACGGTTCAGGGCCCTaGGGGTCCGGCTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SLKGQRSSQRATVQGPEGDGSGP*GSGSPG
Trigger: TCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTC...ACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000533686.5
ENST00000539589.5
CDS-3UTR TCA 90 bp AGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGGTGCCTGCTTCCAGATaGCGCACTCCGAACCCCAGC +
Preference number: 4 (lower is better)
Translates to: RSSQRATVQGPEGPALQEVPASR*RTPNPS
Trigger: GCTGGGGTTCGGAGTGCGTCATCTGGAAGCAGGCAC...CTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539589.5
CDS-3UTR GCA 90 bp GGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGACCACCCGCTGTACCGTaGGCCTGTAGTTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GAARERRFRALRVRLSRRPPAVP*ACSCQP
Trigger: AGGCTGGCAACTACAGGCGCACGGTACAGCGGGTGG...TCTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCTCCCCTCCCTGGGTCTCCCGCACCTCCAGGTaGAGCGCGCTCAGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: VPSLPVPSLDKGPSPPWVSRTSR*SALSRS
Trigger: TGAGCGGCTGAGCGCGCTGCACCTGGAGGTGCGGGA...GACCCAGGGAGGGGAGGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCACCCGCTCACTGTCCTaGCCTTGCAGCTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GQRSSQRATVQGPEGPALTRSLS*PCSFSR
Trigger: GCGGGAGAAGCTGCAAGGGCAGGACAGTGAGCGGGT...GAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp AGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGGGAGACGGCGCTGTCTaGCTTTGCGTGGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: RSSQRATVQGPEGPALQEGDGAV*LCVALP
Trigger: AGGGAGAGCCACGCAAAGGCAGACAGCGCCGTCTCC...CTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGACTCGACAGGACCCCTTaGCGCCCGGAGCTGCATAAC +
Preference number: 4 (lower is better)
Translates to: GAARERRFRALRVRLSRRLDRTP*RPELHN
Trigger: GTTATGCAGCTCCGGGCGGCAAGGGGTCCTGTCGAG...TCTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539589.5
CDS-3UTR CCA 90 bp AGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGAAGCTGCGCAGCACGGAATGGTaGCGGATTTGGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SQRATVQGPEGPALQEKLRSTEW*RIWGWG
Trigger: GCCCCAGCCCCAAATCCGCCACCATTCCGTGCTGCG...CAGCTTCTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCAAGAAAAGAAGCCGCTaGCGCTCGGCGGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GQRSSQRATVQGPEGPALKKRSR*RSAAWQ
Trigger: CTGCCAGGCCGCCGAGCGCCAGCGGCTTCTTTTCTT...GAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp AGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGCTCTGCAACTGGCCTTaGCACCAGCCCTGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: RSSQRATVQGPEGPALQELCNWP*HQPCSS
Trigger: GGACGAGCAGGGCTGGTGCCAAGGCCAGTTGCAGAG...CTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000533686.5
ENST00000539589.5
CDS-3UTR TCA 90 bp GGGCTGTCAGGACACTCAGGCGCCCACACACTCCACGTAGTTGGCAGGGTACAGGCTCCTGGAAGCAGCTaGCCAGGTCCCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: GLSGHSGAHTLHVVGRVQAPGSS*PGPRTA
Trigger: GGCTGTGCGGGGACCTGGTCAGCTGCTTCCAGGAGC...CTGTACCCTGCCAACTACGTGGAGTGTGTGGGCGCCTGAGTGTCCTGACAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR TCA 90 bp GTAGTCATAGAGTGCCCTCACCCGAACCCCGGTGGCAGCCTTCCGGGGACTCTCGCCGCTCAGCCGCCGTaGAAAAGGCATGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: VVIECPHPNPGGSLPGTLAAQPP*KRHARP
Trigger: AGGCCTGGCATGCCTTTTTCACGGCGGCTGAGCGGC...GAGAGTCCCCGGAAGGCTGCCACCGGGGTTCGGGTGAGGGCACTCTATGACTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR GCA 90 bp CAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCTCCTCCCCGCACAGCCGGTaGCCGTCCTCCACCCGCTGT +
Preference number: 4 (lower is better)
Translates to: QPRLVPSLPVPSLDKGPSSPHSR*PSSTRC
Trigger: ACAGCGGGTGGAGGACGGGCACCGGCTGTGCGGGGA...GGAGGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp AGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGAAGCTGACCCGCTCACTGTCCTaGCCTTGCAGCTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SQRATVQGPEGPALQEKLTRSLS*PCSFSR
Trigger: GCGGGAGAAGCTGCAAGGGCAGGACAGTGAGCGGGT...CAGCTTCTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGACGTTCCACCCGTTCCTaGAGTTTGCGCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GAARERRFRALRVRLSRRRSTRS*SLRSCS
Trigger: GGAGCAGCTGCGCAAACTGCAGGAACGGGTGGAACG...TCTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GCCCAGGCACCCCTGAACGCTTCTGTCACCTCTGACCTCCCATCTTGCCCTCAGTGCCTGGCCCGTGGGTaGTGCGCCACCAGCGCAGAT +
Preference number: 4 (lower is better)
Translates to: AQAPLNASVTSDLPSCPQCLARG*CATSAD
Trigger: ATCTGCGCTGGTGGCGCAGCACCCACGGGCCAGGCA...CTGAGGGCAAGATGGGAGGTCAGAGGTGACAGAAGCGTTCAGGGGTGCCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp AGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGAAGCTGGGACTGGGGTGGGGGTaGGGTGCCATCTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: SQRATVQGPEGPALQEKLGLGWG*GAISCR
Trigger: CCTACAAGAGATGGCACCGCACCCCCACCCCAGTCC...CAGCTTCTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000533686.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGACCAATGCGGCCACTCTaGAACTGGCCTTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: GAARERRFRALRVRLSRRPMRPL*NWPWHQ
Trigger: CTGGTGCCAAGGCCAGTTGCAGAGTGGCCGCATTGG...TCTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000533686.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGGTACAGGCCAATaGGGCCACTCTGCAACTGGC +
Preference number: 4 (lower is better)
Translates to: GQRSSQRATVQGPEGPALQGTGQ*GHSATG
Trigger: GCCAGTTGCAGAGTGGCCGCATTGGCCTGTACCCTG...GAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000533686.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CCTGGGTCCCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACCGCAGCACGGAATGGTaGCGGATTTGGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PGSQDFLPQGTEEQPESDRSTEW*RIWGWG
Trigger: GCCCCAGCCCCAAATCCGCCACCATTCCGTGCTGCG...GTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGGGACCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCTCCCCTCCCTGGGTCCCCCGCAGCACGGAATaGTGGCGGATTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VPSLPVPSLDKGPSPPWVPRSTE*WRIWGW
Trigger: CCAGCCCCAAATCCGCCACCATTCCGTGCTGCGGGG...GACCCAGGGAGGGGAGGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGAAGCTCCAGCGTCCTCTTCTaGAGCCATGGTGTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: AARERRFRALRVRLSRRSSSVLF*SHGVPA
Trigger: TGCGGGGACACCATGGCTCCAGAAGAGGACGCTGGA...GCTTCTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CCTGGGTCCCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACTGGCGCTCGGCGGCCTaGCAGGTCTCAAAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PGSQDFLPQGTEEQPESDWRSAA*QVSKAC
Trigger: ACAGGCCTTTGAGACCTGCCAGGCCGCCGAGCGCCA...GTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGGGACCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGGCGCTCGGCGGCCTaGCAGGTCTCAAAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: DFLPQGTEEQPESDGSGPWRSAA*QVSKAC
Trigger: ACAGGCCTTTGAGACCTGCCAGGCCGCCGAGCGCCA...GGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACTCAGGCGCCCACACACTCCAGCCATGCCTGGCCCGTaGGTGCTGCGCCACCAGCGC +
Preference number: 4 (lower is better)
Translates to: VGKRCRRAVRTLRRPHTPAMPGP*VLRHQR
Trigger: GCGCTGGTGGCGCAGCACCCACGGGCCAGGCATGGC...TGGAGTGTGTGGGCGCCTGAGTGTCCTGACAGCCCTTCTGCAACGTTTACCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532457.5
ENST00000533686.5
CDS-3UTR CCA 90 bp CTGGGTCCCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCATGGCCATGCCTaGCCCGTGGGTGCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: LGPRTSSLKGQRSSQRATVHGHA*PVGAAP
Trigger: TGGCGCAGCACCCACGGGCCAGGCATGGCCATGAAC...CGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGGGACCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CCTGGGTCCCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGTTCATGGCCATGCCTaGCCCGTGGGTGCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: PGSQDFLPQGTEEQPESDVHGHA*PVGAAP
Trigger: TGGCGCAGCACCCACGGGCCAGGCATGGCCATGAAC...GTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGGGACCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp TCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGTTCATGGCCATGCCTaGCCCGTGGGTGCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: SSLKGQRSSQRATVQGPEVHGHA*PVGAAP
Trigger: TGGCGCAGCACCCACGGGCCAGGCATGGCCATGAAC...CTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGCTCTGCAACTGGCCTTaGCACCAGCCCTGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: PPSRDRGAARERRFRALRLCNWP*HQPCSS
Trigger: GGACGAGCAGGGCTGGTGCCAAGGCCAGTTGCAGAG...CCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCCGGCCACTCTGCAACTaGCCTTGGCACCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: DFLPQGTEEQPESDGSGPRPLCN*PWHQPC
Trigger: GCAGGGCTGGTGCCAAGGCCAGTTGCAGAGTGGCCG...GGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp AGCTTCCTGGCCAGCGTAGTCATAGAGTGCCCTCACCCGAACCCCGGTGGCAGCCGGCCACTCTGCAACTaGCCTTGGCACCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SFLASVVIECPHPNPGGSRPLCN*PWHQPC
Trigger: GCAGGGCTGGTGCCAAGGCCAGTTGCAGAGTGGCCG...GCTGCCACCGGGGTTCGGGTGAGGGCACTCTATGACTACGCTGGCCAGGAAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR TCA 90 bp TGCAGAAGGGCTGTCAGGACACTCAGGCGCCCACACACTCCACGTAGTTGGCAGGACGGTTCAGGGCCCTaGGGGTCCGGCTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: CRRAVRTLRRPHTPRSWQDGSGP*GSGSPG
Trigger: TCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTC...CTGCCAACTACGTGGAGTGTGTGGGCGCCTGAGTGTCCTGACAGCCCTTCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532457.5
ENST00000533686.5
CDS-3UTR GCA 90 bp ACAGCTCCTGGGGAGGCCCAGGCACCCCTGAACGCTTCTGTCACCTCTGACCTCCAGCCTCCCAGAAACTaGCCCCTAAGGCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: TAPGEAQAPLNASVTSDLQPPRN*PLRPPL
Trigger: GAGGGGAGGCCTTAGGGGGCAGTTTCTGGGAGGCTG...GAGGTCAGAGGTGACAGAAGCGTTCAGGGGTGCCTGGGCCTCCCCAGGAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGCCGTGCGCCTGTAGTTaGCAGCCTCCCAGAAACTGC +
Preference number: 4 (lower is better)
Translates to: LKGQRSSQRATVQGPEGPPCACS*QPPRNC
Trigger: GCAGTTTCTGGGAGGCTGGCAACTACAGGCGCACGG...CGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CCCCGGTGGCAGCCTTCCGGGGACTCTCTTCATCTGACCACTCCTCATCCTGCCACCCGCTCACTGTCCTaGCCTTGCAGCTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: PRWQPSGDSLHLTTPHPATRSLS*PCSFSR
Trigger: GCGGGAGAAGCTGCAAGGGCAGGACAGTGAGCGGGT...GGCAGGATGAGGAGTGGTCAGATGAAGAGAGTCCCCGGAAGGCTGCCACCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR GCA 90 bp CCTGGGTCCCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGAGACGGCGCTGTCTaGCTTTGCGTGGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PGSQDFLPQGTEEQPESDGDGAV*LCVALP
Trigger: AGGGAGAGCCACGCAAAGGCAGACAGCGCCGTCTCC...GTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGGGACCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GGGTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACTCAGGCGCCCACACACTCCTGGCCCGTGGGTGCTaGGCCACCAGCGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: GWVNVAEGLSGHSGAHTLLARGC*ATSADP
Trigger: AGGATCTGCGCTGGTGGCGCAGCACCCACGGGCCAG...GAGTGTGTGGGCGCCTGAGTGTCCTGACAGCCCTTCTGCAACGTTTACCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532457.5
ENST00000533686.5
CDS-3UTR GCA 90 bp CCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCCTGGCCCGTGGGTGCTaGGCCACCAGCGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: PQPRLVPSLPVPSLDKGPLARGC*ATSADP
Trigger: AGGATCTGCGCTGGTGGCGCAGCACCCACGGGCCAG...GGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCTCCTGCCTGGCCCGTGGGTaGTGCGCCACCAGCGCAGAT +
Preference number: 4 (lower is better)
Translates to: QPRLVPSLPVPSLDKGPSCLARG*CATSAD
Trigger: ATCTGCGCTGGTGGCGCAGCACCCACGGGCCAGGCA...GGAGGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGAAGCGTAGTCATAGAGTaGCCTCACCCGAACCCCGGT +
Preference number: 4 (lower is better)
Translates to: GAARERRFRALRVRLSRRSVVIE*PHPNPG
Trigger: ACCGGGGTTCGGGTGAGGGCACTCTATGACTACGCT...TCTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp AGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGAGCGTAGTCATAGAGTaGCCTCACCCGAACCCCGGT +
Preference number: 4 (lower is better)
Translates to: RSSQRATVQGPEGPALQESVVIE*PHPNPG
Trigger: ACCGGGGTTCGGGTGAGGGCACTCTATGACTACGCT...CTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGCAGCAGCTCCTCCCCTaGTCGGAAGCTCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: PPSRDRGAARERRFRALRQQLLP*SEAQLI
Trigger: GATGAGCTGAGCTTCCGAGCAGGGGAGGAGCTGCTG...CCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGCCTTGGCACCAGCCCTaGTCGTCCTCCTCACTCATC +
Preference number: 4 (lower is better)
Translates to: LKGQRSSQRATVQGPEGPPWHQP*SSSSLI
Trigger: GATGAGTGAGGAGGACGAGCAGGGCTGGTGCCAAGG...CGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000533686.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCGCCGGCCGGGGTGCCTaGTTCCAGATGACGCACTCC +
Preference number: 4 (lower is better)
Translates to: PQPRLVPSLPVPSLDKGPAGRGA*FQMTHS
Trigger: GGAGTGCGTCATCTGGAAGCAGGCACCCCGGCCGGC...GGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539589.5
CDS-3UTR CCA 90 bp AGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGGAATGGTGGCGGATTTaGGGCTGGGGCCTAGAGATC +
Preference number: 4 (lower is better)
Translates to: RSSQRATVQGPEGPALQEEWWRI*GWGLEI
Trigger: GATCTCTAGGCCCCAGCCCCAAATCCGCCACCATTC...CTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGAAGCTGGCTCTCCCTCGTCTaGGCGGTCTTCTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: AARERRFRALRVRLSRRSWLSLV*AVFSSF
Trigger: GAAGGATGAGAAGACCGCCCAGACGAGGGAGAGCCA...GCTTCTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGATCTTCTCGGCCTCCTTaGCACAGCGTTCCACCCGTT +
Preference number: 4 (lower is better)
Translates to: GAARERRFRALRVRLSRRSSRPP*HSVPPV
Trigger: AACGGGTGGAACGCTGTGCCAAGGAGGCCGAGAAGA...TCTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp AACAAGCCACAAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGCCCACGCCATGCCTGGCCCGTaGGTGCTGCGCCACCAGCGC +
Preference number: 4 (lower is better)
Translates to: NKPQEGAARPELHSPQAHAMPGP*VLRHQR
Trigger: GCGCTGGTGGCGCAGCACCCACGGGCCAGGCATGGC...GTGGGCTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTTGTGGCTTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR TCA 90 bp CCATCTTGCCCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACGACGGTTCAGGGCCCTaGGGGTCCGGCTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PSCPQPRLVPSLPVPSLDDGSGP*GSGSPG
Trigger: TCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTC...GTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGGGCAAGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGAAGCGTGTCCAACTCTCAATaGTGCCACCGTGACTCTGCC +
Preference number: 4 (lower is better)
Translates to: AARERRFRALRVRLSRRSVSNSQ*CHRDSA
Trigger: GGCAGAGTCACGGTGGCAGCATTGAGAGTTGGACAC...GCTTCTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGCAGCCTCCCAGAAACTaGCCCCTAAGGCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PGLPPSRDRGAARERRFRQPPRN*PLRPPL
Trigger: GAGGGGAGGCCTTAGGGGGCAGTTTCTGGGAGGCTG...CCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp AAGCTGGGCTCTGAACCAGGGTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACTCCCCGCACAGCCGGTaGCCGTCCTCCACCCGCTGT +
Preference number: 4 (lower is better)
Translates to: KLGSEPGWVNVAEGLSGHSPHSR*PSSTRC
Trigger: ACAGCGGGTGGAGGACGGGCACCGGCTGTGCGGGGA...GTGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCTGGTTCAGAGCCCAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp AGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGAAGCTGAGGCCTTCTCCAGTGTaGCATACTGGGGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SQRATVQGPEGPALQEKLRPSPV*HTGGPS
Trigger: AGAAGGGCCCCCAGTATGGCACACTGGAGAAGGCCT...CAGCTTCTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GCTCATCAGCTTCCTGGCCAGCGTAGTCATAGAGTGCCCTCACCCGAACCCCGGGGAGACGGCGCTGTCTaGCTTTGCGTGGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: AHQLPGQRSHRVPSPEPRGDGAV*LCVALP
Trigger: AGGGAGAGCCACGCAAAGGCAGACAGCGCCGTCTCC...CCGGGGTTCGGGTGAGGGCACTCTATGACTACGCTGGCCAGGAAGCTGATGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR GCA 90 bp ACAGCTCCTGGGGAGGCCCAGGCACCCCTGAACGCTTCTGTCACCTCTGACCTCCGTTCCACCCGTTCCTaGAGTTTGCGCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TAPGEAQAPLNASVTSDLRSTRS*SLRSCS
Trigger: GGAGCAGCTGCGCAAACTGCAGGAACGGGTGGAACG...GAGGTCAGAGGTGACAGAAGCGTTCAGGGGTGCCTGGGCCTCCCCAGGAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGAGTAGCGATGCAGCTCTaGCAGCGTCTGCTCATACTG +
Preference number: 4 (lower is better)
Translates to: GAARERRFRALRVRLSRRVAMQL*QRLLIL
Trigger: CAGTATGAGCAGACGCTGGCAGAGCTGCATCGCTAC...TCTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGAAGCGCCTCAATGCCCTGGTaGAAGTCACGGTGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: AARERRFRALRVRLSRRSASMPW*KSRWSS
Trigger: TGAACTCCACCGTGACTTGCACCAGGGCATTGAGGC...GCTTCTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CTCCCATCTTGCCCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTACTGGCCCGTGGGTGCTaGGCCACCAGCGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: LPSCPQPRLVPSLPVPSLLARGC*ATSADP
Trigger: AGGATCTGCGCTGGTGGCGCAGCACCCACGGGCCAG...TAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGGGCAAGATGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGGACTGGGGTGGGGGTaGGGTGCCATCTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: PGLPPSRDRGAARERRFRGLGWG*GAISCR
Trigger: CCTACAAGAGATGGCACCGCACCCCCACCCCAGTCC...CCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CCTGGGTCCCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACCCTTGGCACCAGCCCTaGTCGTCCTCCTCACTCATC +
Preference number: 4 (lower is better)
Translates to: PGSQDFLPQGTEEQPESDPWHQP*SSSSLI
Trigger: GATGAGTGAGGAGGACGAGCAGGGCTGGTGCCAAGG...GTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGGGACCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CCTGGGTCCCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACCCAATGCGGCCACTCTaGAACTGGCCTTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: PGSQDFLPQGTEEQPESDPMRPL*NWPWHQ
Trigger: CTGGTGCCAAGGCCAGTTGCAGAGTGGCCGCATTGG...GTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGGGACCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp AGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGTCTGACCTCCCATCTTaGCCTCAGCCTAGACTCGTC +
Preference number: 4 (lower is better)
Translates to: RSSQRATVQGPEGPALQESDLPS*PQPRLV
Trigger: GACGAGTCTAGGCTGAGGGCAAGATGGGAGGTCAGA...CTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCTGGCGGATTTGGGGCTaGGGCCTAGAGATCACTTCA +
Preference number: 4 (lower is better)
Translates to: DRGAARERRFRALRVRLSWRIWG*GLEITS
Trigger: TGAAGTGATCTCTAGGCCCCAGCCCCAAATCCGCCA...GGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp ACAGCTCCTGGGGAGGCCCAGGCACCCCTGAACGCTTCTGTCACCTCTGACCTCCCTCTTCTGGAGCCATaGTGTCCCCGCAGCACGGAA +
Preference number: 4 (lower is better)
Translates to: TAPGEAQAPLNASVTSDLPLLEP*CPRSTE
Trigger: TTCCGTGCTGCGGGGACACCATGGCTCCAGAAGAGG...GAGGTCAGAGGTGACAGAAGCGTTCAGGGGTGCCTGGGCCTCCCCAGGAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGAGTCCTCCATGTAGCGTaGAGTGTAGCGATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GAARERRFRALRVRLSRRVLHVA*SVAMQL
Trigger: GAGCTGCATCGCTACACTCCACGCTACATGGAGGAC...TCTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCTGGCGCTCGGCGGCCTaGCAGGTCTCAAAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PQPRLVPSLPVPSLDKGPWRSAA*QVSKAC
Trigger: ACAGGCCTTTGAGACCTGCCAGGCCGCCGAGCGCCA...GGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CAGCCTTCCGGGGACTCTCTTCATCTGACCACTCCTCATCCTGCCCCGTGCCTGAAGAAAAGAAGCCGCTaGCGCTCGGCGGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: QPSGDSLHLTTPHPAPCLKKRSR*RSAAWQ
Trigger: CTGCCAGGCCGCCGAGCGCCAGCGGCTTCTTTTCTT...CAGGCACGGGGCAGGATGAGGAGTGGTCAGATGAAGAGAGTCCCCGGAAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR CCA 90 bp CTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTGCCTCAATGCCCTaGTGCAAGTCACGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: LKGQRSSQRATVQGPEGPAASMP*CKSRWS
Trigger: ACTCCACCGTGACTTGCACCAGGGCATTGAGGCAGC...CGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCTCCTCACCCGAACCCCGGTaGCAGCCTTCCGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: QPRLVPSLPVPSLDKGPSSPEPR*QPSGDS
Trigger: AGAGTCCCCGGAAGGCTGCCACCGGGGTTCGGGTGA...GGAGGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp TCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGAGGCTACGCGCCTCTaGCCTCAACCCTTATGGACC +
Preference number: 4 (lower is better)
Translates to: SSLKGQRSSQRATVQGPEEATRL*PQPLWT
Trigger: GGTCCATAAGGGTTGAGGCCAGAGGCGCGTAGCCTC...CTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539589.5
CDS-3UTR TCA 90 bp TGCAGAAGGGCTGTCAGGACACTCAGGCGCCCACACACTCCACGTAGTTGGCAGTCAATGCTGCCACCGTaGCTCTGCCGCGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: CRRAVRTLRRPHTPRSWQSMLPP*LCRVLP
Trigger: AGGGAGGACGCGGCAGAGTCACGGTGGCAGCATTGA...CTGCCAACTACGTGGAGTGTGTGGGCGCCTGAGTGTCCTGACAGCCCTTCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR TCA 90 bp AAGCTGGGCTCTGAACCAGGGTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACGCTCCTGGAAGCAGCTaGCCAGGTCCCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: KLGSEPGWVNVAEGLSGHAPGSS*PGPRTA
Trigger: GGCTGTGCGGGGACCTGGTCAGCTGCTTCCAGGAGC...GTGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCTGGTTCAGAGCCCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR TCA 90 bp CTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGGGGACTCTCTTCATCTaGCCACTCCTCATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LPPSRDRGAARERRFRALGTLFI*PLLILP
Trigger: GGGCAGGATGAGGAGTGGTCAGATGAAGAGAGTCCC...CAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR TCA 90 bp CTCCCTGGGTCCCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGGAGAAGCTGGGCTCTaGACCAGGGTGGGTAAACGT +
Preference number: 4 (lower is better)
Translates to: LPGSQDFLPQGTEEQPESGEAGL*TRVGKR
Trigger: ACGTTTACCCACCCTGGTTCAGAGCCCAGCTTCTCC...GCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGGGACCCAGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR TCA 90 bp TCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTGGAGAAGCTGGGCTCTaGACCAGGGTGGGTAAACGT +
Preference number: 4 (lower is better)
Translates to: SLKGQRSSQRATVQGPEGGEAGL*TRVGKR
Trigger: ACGTTTACCCACCCTGGTTCAGAGCCCAGCTTCTCC...ACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000533686.5
ENST00000539589.5
CDS-3UTR TCA 90 bp ACAGCTCCTGGGGAGGCCCAGGCACCCCTGAACGCTTCTGTCACCTCTGACCTCCGCTTCTGTCACCTCTaGCCTCCCATCTTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: TAPGEAQAPLNASVTSDLRFCHL*PPILPS
Trigger: TGAGGGCAAGATGGGAGGTCAGAGGTGACAGAAGCG...GAGGTCAGAGGTGACAGAAGCGTTCAGGGGTGCCTGGGCCTCCCCAGGAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR TCA 90 bp AAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGCCCACCCCAGGAACCAGGCCCAGGCACCCCTaGACGCTTCTGTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: KRVLLGQNYTHPKPTPGTRPRHP*TLLSPL
Trigger: CAGAGGTGACAGAAGCGTTCAGGGGTGCCTGGGCCT...GGTTCCTGGGGTGGGCTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR TCA 90 bp AAGCTGGGCTCTGAACCAGGGTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACTCAATGCTGCCACCGTaGCTCTGCCTGCCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: KLGSEPGWVNVAEGLSGHSMLPP*LCLPAG
Trigger: CCCGGCCGGCAGGCAGAGTCACGGTGGCAGCATTGA...GTGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCTGGTTCAGAGCCCAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539589.5
CDS-3UTR GCA 90 bp CAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCTCCCCACCCGCTGTACCGTaGGCCTGTAGTTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QPRLVPSLPVPSLDKGPSPPAVP*ACSCQP
Trigger: AGGCTGGCAACTACAGGCGCACGGTACAGCGGGTGG...GGAGGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCTCCTGCAGTTTGCGCAGCTaGTCCTGGGAGACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: QPRLVPSLPVPSLDKGPSCSLRS*SWETAL
Trigger: CAGCGCCGTCTCCCAGGAGCAGCTGCGCAAACTGCA...GGAGGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp TGCAGAAGGGCTGTCAGGACACTCAGGCGCCCACACACTCCACGTAGTTGGCAGTGCAGTTTGCGCAGCTaGTCCTGGGAGACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: CRRAVRTLRRPHTPRSWQCSLRS*SWETAL
Trigger: CAGCGCCGTCTCCCAGGAGCAGCTGCGCAAACTGCA...CTGCCAACTACGTGGAGTGTGTGGGCGCCTGAGTGTCCTGACAGCCCTTCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR GCA 90 bp CTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGCACTGGCTGCCTCAATaGCCTGGTGCAAGTCACGGT +
Preference number: 4 (lower is better)
Translates to: LPPSRDRGAARERRFRALHWLPQ*PGASHG
Trigger: ACCGTGACTTGCACCAGGGCATTGAGGCAGCCAGTG...CAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp TCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGCACTGGCTGCCTCAATaGCCTGGTGCAAGTCACGGT +
Preference number: 4 (lower is better)
Translates to: SSLKGQRSSQRATVQGPEHWLPQ*PGASHG
Trigger: ACCGTGACTTGCACCAGGGCATTGAGGCAGCCAGTG...CTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp AAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGCCCACCCCAGGAACCGGACTGGGGTGGGGGTaGGGTGCCATCTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: KRVLLGQNYTHPKPTPGTGLGWG*GAISCR
Trigger: CCTACAAGAGATGGCACCGCACCCCCACCCCAGTCC...GGTTCCTGGGGTGGGCTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GGGTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACTCAGGCGCCCACACACTCGGACTGGGGTGGGGGTaGGGTGCCATCTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: GWVNVAEGLSGHSGAHTLGLGWG*GAISCR
Trigger: CCTACAAGAGATGGCACCGCACCCCCACCCCAGTCC...GAGTGTGTGGGCGCCTGAGTGTCCTGACAGCCCTTCTGCAACGTTTACCCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532457.5
ENST00000533686.5
CDS-3UTR GCA 90 bp TCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTAGCGTAGTCATAGAGTaGCCTCACCCGAACCCCGGT +
Preference number: 4 (lower is better)
Translates to: SLKGQRSSQRATVQGPEGSVVIE*PHPNPG
Trigger: ACCGGGGTTCGGGTGAGGGCACTCTATGACTACGCT...ACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CCATCTTGCCCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACCTTGCCGCCCGGAGCTaGATAACTCGGAGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: PSCPQPRLVPSLPVPSLDLAARS*ITRSPW
Trigger: CCACGGGCTCCGAGTTATGCAGCTCCGGGCGGCAAG...GTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGGGCAAGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539589.5
CDS-3UTR GCA 90 bp AAGCTGGGCTCTGAACCAGGGTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACGCCTGCCGGCCGGGGTaGCTGCTTCCAGATGACGCA +
Preference number: 4 (lower is better)
Translates to: KLGSEPGWVNVAEGLSGHACRPG*LLPDDA
Trigger: TGCGTCATCTGGAAGCAGGCACCCCGGCCGGCAGGC...GTGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCTGGTTCAGAGCCCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539589.5
CDS-3UTR CCA 90 bp CCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGTCCAGCGTCCTCTTCTaGAGCCATGGTGTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: PGLPPSRDRGAARERRFRSSVLF*SHGVPA
Trigger: TGCGGGGACACCATGGCTCCAGAAGAGGACGCTGGA...CCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCTCCCCTCCCTGGGTCGCTGCCTCAATGCCCTaGTGCAAGTCACGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: VPSLPVPSLDKGPSPPWVAASMP*CKSRWS
Trigger: ACTCCACCGTGACTTGCACCAGGGCATTGAGGCAGC...GACCCAGGGAGGGGAGGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CCATCTTGCCCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACTCACCCGAACCCCGGTaGCAGCCTTCCGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: PSCPQPRLVPSLPVPSLDSPEPR*QPSGDS
Trigger: AGAGTCCCCGGAAGGCTGCCACCGGGGTTCGGGTGA...GTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGGGCAAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CTCCCATCTTGCCCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTATCACCCGAACCCCGGTaGCAGCCTTCCGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: LPSCPQPRLVPSLPVPSLSPEPR*QPSGDS
Trigger: AGAGTCCCCGGAAGGCTGCCACCGGGGTTCGGGTGA...TAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGGGCAAGATGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCTCCCTCTGCAACTGGCCTTaGCACCAGCCCTGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: QPRLVPSLPVPSLDKGPSLCNWP*HQPCSS
Trigger: GGACGAGCAGGGCTGGTGCCAAGGCCAGTTGCAGAG...GGAGGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp AGGGCTGTCAGGACACTCAGGCGCCCACACACTCCACGTAGTTGGCAGGGTACACTCTGCAACTGGCCTTaGCACCAGCCCTGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: RAVRTLRRPHTPRSWQGTLCNWP*HQPCSS
Trigger: GGACGAGCAGGGCTGGTGCCAAGGCCAGTTGCAGAG...TGTACCCTGCCAACTACGTGGAGTGTGTGGGCGCCTGAGTGTCCTGACAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532457.5
ENST00000533686.5
CDS-3UTR CCA 90 bp CAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCTCCTGGCCTCAACCCTTATaGACCGCGCCCCTCGACAGG +
Preference number: 4 (lower is better)
Translates to: QPRLVPSLPVPSLDKGPSWPQPL*TAPLDR
Trigger: CCTGTCGAGGGGCGCGGTCCATAAGGGTTGAGGCCA...GGAGGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539589.5
CDS-3UTR TCA 90 bp AGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCAGGAGAAGCTGAGCGTCTGCTCATACTaGGCTTTTGTCTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SQRATVQGPEGPALQEKLSVCSY*AFVFSA
Trigger: GGCCGAGAAGACAAAAGCTCAGTATGAGCAGACGCT...CAGCTTCTCCTGGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR TCA 90 bp CAGCCTTCCGGGGACTCTCTTCATCTGACCACTCCTCATCCTGCCCCGTGCCTGGGGACTCTCTTCATCTaGCCACTCCTCATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QPSGDSLHLTTPHPAPCLGTLFI*PLLILP
Trigger: GGGCAGGATGAGGAGTGGTCAGATGAAGAGAGTCCC...CAGGCACGGGGCAGGATGAGGAGTGGTCAGATGAAGAGAGTCCCCGGAAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR TCA 90 bp CCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGCGCTTCTGTCACCTCTaGCCTCCCATCTTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PGLPPSRDRGAARERRFRRFCHL*PPILPS
Trigger: TGAGGGCAAGATGGGAGGTCAGAGGTGACAGAAGCG...CCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR TCA 90 bp CTCCCATCTTGCCCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAAGGCCCAGGCACCCCTaGACGCTTCTGTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: LPSCPQPRLVPSLPVPSLRPRHP*TLLSPL
Trigger: CAGAGGTGACAGAAGCGTTCAGGGGTGCCTGGGCCT...TAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGGGCAAGATGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GCCCAGGCACCCCTGAACGCTTCTGTCACCTCTGACCTCCCATCTTGCCCTCAGTCCAACTCTCAATGCTaGCACCGTGACTCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: AQAPLNASVTSDLPSCPQSNSQC*HRDSAA
Trigger: CGCGGCAGAGTCACGGTGGCAGCATTGAGAGTTGGA...CTGAGGGCAAGATGGGAGGTCAGAGGTGACAGAAGCGTTCAGGGGTGCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298838.11
ENST00000532457.5
CDS-3UTR GCA 90 bp CTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGGTGTCCAACTCTCAATaGTGCCACCGTGACTCTGCC +
Preference number: 4 (lower is better)
Translates to: LPPSRDRGAARERRFRALVSNSQ*CHRDSA
Trigger: GGCAGAGTCACGGTGGCAGCATTGAGAGTTGGACAC...CAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCTCCCCTCCCTGGGTCGCCGTGAAAAAGGCATaGCAGGCCTTCTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: VPSLPVPSLDKGPSPPWVAVKKA*QAFSSV
Trigger: CACACTGGAGAAGGCCTGGCATGCCTTTTTCACGGC...GACCCAGGGAGGGGAGGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp TGCAGAAGGGCTGTCAGGACACTCAGGCGCCCACACACTCCACGTAGTTGGCAGCGTTCCACCCGTTCCTaGAGTTTGCGCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CRRAVRTLRRPHTPRSWQRSTRS*SLRSCS
Trigger: GGAGCAGCTGCGCAAACTGCAGGAACGGGTGGAACG...CTGCCAACTACGTGGAGTGTGTGGGCGCCTGAGTGTCCTGACAGCCCTTCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR GCA 90 bp GACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCCATGGAACTTCTCACTaGTGGAAAGGTCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: DRGAARERRFRALRVRLSHGTSH*WKGPGA
Trigger: AGCACCTGGACCTTTCCAGCAGTGAGAAGTTCCATG...GGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CTGGGTCCCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGCTCTTCGTCACTGGCTaGCTCAATGCCCTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: LGPRTSSLKGQRSSQRATLFVTG*LNALVQ
Trigger: TTGCACCAGGGCATTGAGGCAGCCAGTGACGAAGAG...CGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGGGACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GGGTGGGGGTGCGGTGCCATCTCTTGTAGGCACAATGCTGGTCAGGGTAACCTCCAGCAGCTCCTCCCCTaGTCGGAAGCTCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: GWGCGAISCRHNAGQGNLQQLLP*SEAQLI
Trigger: GATGAGCTGAGCTTCCGAGCAGGGGAGGAGCTGCTG...GAGGTTACCCTGACCAGCATTGTGCCTACAAGAGATGGCACCGCACCCCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR GCA 90 bp AGGGCTGTCAGGACACTCAGGCGCCCACACACTCCACGTAGTTGGCAGGGTACACCTTGGCACCAGCCCTaGTCGTCCTCCTCACTCATC +
Preference number: 4 (lower is better)
Translates to: RAVRTLRRPHTPRSWQGTPWHQP*SSSSLI
Trigger: GATGAGTGAGGAGGACGAGCAGGGCTGGTGCCAAGG...TGTACCCTGCCAACTACGTGGAGTGTGTGGGCGCCTGAGTGTCCTGACAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532457.5
ENST00000533686.5
CDS-3UTR GCA 90 bp GGGTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACTCAGGCGCCCACACACTCCAGGGTACAGGCCAATaGGGCCACTCTGCAACTGGC +
Preference number: 4 (lower is better)
Translates to: GWVNVAEGLSGHSGAHTLQGTGQ*GHSATG
Trigger: GCCAGTTGCAGAGTGGCCGCATTGGCCTGTACCCTG...GAGTGTGTGGGCGCCTGAGTGTCCTGACAGCCCTTCTGCAACGTTTACCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532457.5
ENST00000533686.5
CDS-3UTR GCA 90 bp ACAGCTCCTGGGGAGGCCCAGGCACCCCTGAACGCTTCTGTCACCTCTGACCTCTCTGACCTCCCATCTTaGCCTCAGCCTAGACTCGTC +
Preference number: 4 (lower is better)
Translates to: TAPGEAQAPLNASVTSDLSDLPS*PQPRLV
Trigger: GACGAGTCTAGGCTGAGGGCAAGATGGGAGGTCAGA...GAGGTCAGAGGTGACAGAAGCGTTCAGGGGTGCCTGGGCCTCCCCAGGAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTCCAACTCTCAATGCTaGCACCGTGACTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: DFLPQGTEEQPESDGSGPSNSQC*HRDSAC
Trigger: GCAGGCAGAGTCACGGTGGCAGCATTGAGAGTTGGA...GGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539589.5
CDS-3UTR CCA 90 bp TCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGTGGCGGATTTGGGGCTaGGGCCTAGAGATCACTTCA +
Preference number: 4 (lower is better)
Translates to: SSLKGQRSSQRATVQGPEWRIWG*GLEITS
Trigger: TGAAGTGATCTCTAGGCCCCAGCCCCAAATCCGCCA...CTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CCTGGGTCCCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACTGGCGGATTTGGGGCTaGGGCCTAGAGATCACTTCA +
Preference number: 4 (lower is better)
Translates to: PGSQDFLPQGTEEQPESDWRIWG*GLEITS
Trigger: TGAAGTGATCTCTAGGCCCCAGCCCCAAATCCGCCA...GTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGGGACCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CAGCCTTCCGGGGACTCTCTTCATCTGACCACTCCTCATCCTGCCCCGTGCCTGGAATGGTGGCGGATTTaGGGCTGGGGCCTAGAGATC +
Preference number: 4 (lower is better)
Translates to: QPSGDSLHLTTPHPAPCLEWWRI*GWGLEI
Trigger: GATCTCTAGGCCCCAGCCCCAAATCCGCCACCATTC...CAGGCACGGGGCAGGATGAGGAGTGGTCAGATGAAGAGAGTCCCCGGAAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR CCA 90 bp CTGGGCTCTGAACCAGGGTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACTCACCCCGCAGCACGGAATaGTGGCGGATTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGSEPGWVNVAEGLSGHSPRSTE*WRIWGW
Trigger: CCAGCCCCAAATCCGCCACCATTCCGTGCTGCGGGG...TGAGTGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCTGGTTCAGAGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR CCA 90 bp CCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCTCCAGTGTGCCATACTaGGGGCCCTTCTCCACGGTC +
Preference number: 4 (lower is better)
Translates to: PQPRLVPSLPVPSLDKGPSSVPY*GPFSTV
Trigger: GACCGTGGAGAAGGGCCCCCAGTATGGCACACTGGA...GGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp AGGGCTGTCAGGACACTCAGGCGCCCACACACTCCACGTAGTTGGCAGGGTACATCCAGTGTGCCATACTaGGGGCCCTTCTCCACGGTC +
Preference number: 4 (lower is better)
Translates to: RAVRTLRRPHTPRSWQGTSSVPY*GPFSTV
Trigger: GACCGTGGAGAAGGGCCCCCAGTATGGCACACTGGA...TGTACCCTGCCAACTACGTGGAGTGTGTGGGCGCCTGAGTGTCCTGACAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR CCA 90 bp GCCCAGGCACCCCTGAACGCTTCTGTCACCTCTGACCTCCCATCTTGCCCTCAGTCTTCTCGGCCTCCTTaGCACAGCGTTCCACCCGTT +
Preference number: 4 (lower is better)
Translates to: AQAPLNASVTSDLPSCPQSSRPP*HSVPPV
Trigger: AACGGGTGGAACGCTGTGCCAAGGAGGCCGAGAAGA...CTGAGGGCAAGATGGGAGGTCAGAGGTGACAGAAGCGTTCAGGGGTGCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCTCCCCTCCCTGGGTCGTCCTCCATGTAGCGTaGAGTGTAGCGATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VPSLPVPSLDKGPSPPWVVLHVA*SVAMQL
Trigger: GAGCTGCATCGCTACACTCCACGCTACATGGAGGAC...GACCCAGGGAGGGGAGGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CCCCGGTGGCAGCCTTCCGGGGACTCTCTTCATCTGACCACTCCTCATCCTGCCGATCCTCTTCGTCACTaGCTGCCTCAATGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: PRWQPSGDSLHLTTPHPADPLRH*LPQCPG
Trigger: ACCAGGGCATTGAGGCAGCCAGTGACGAAGAGGATC...GGCAGGATGAGGAGTGGTCAGATGAAGAGAGTCCCCGGAAGGCTGCCACCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR CCA 90 bp GACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCGATCCTCTTCGTCACTaGCTGCCTCAATGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: DFLPQGTEEQPESDGSGPDPLRH*LPQCPG
Trigger: ACCAGGGCATTGAGGCAGCCAGTGACGAAGAGGATC...GGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR TCA 90 bp AAGCTGGGCTCTGAACCAGGGTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACAGGCCCAGGCACCCCTaGACGCTTCTGTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: KLGSEPGWVNVAEGLSGHRPRHP*TLLSPL
Trigger: CAGAGGTGACAGAAGCGTTCAGGGGTGCCTGGGCCT...GTGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCTGGTTCAGAGCCCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CAGCTCATCAGCTTCCTGGCCAGCGTAGTCATAGAGTGCCCTCACCCGAACCCCTCCAACTCTCAATGCTaGCACCGTGACTCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: QLISFLASVVIECPHPNPSNSQC*HRDSAA
Trigger: CGCGGCAGAGTCACGGTGGCAGCATTGAGAGTTGGA...GGGGTTCGGGTGAGGGCACTCTATGACTACGCTGGCCAGGAAGCTGATGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR GCA 90 bp GCAGAAGGGCTGTCAGGACACTCAGGCGCCCACACACTCCACGTAGTTGGCAGGGTGTCCAACTCTCAATaGTGCCACCGTGACTCTGCC +
Preference number: 4 (lower is better)
Translates to: AEGLSGHSGAHTLHVVGRVSNSQ*CHRDSA
Trigger: GGCAGAGTCACGGTGGCAGCATTGAGAGTTGGACAC...CCTGCCAACTACGTGGAGTGTGTGGGCGCCTGAGTGTCCTGACAGCCCTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR GCA 90 bp AACAAGCCACAAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGCCCACCAGCCTCCCAGAAACTaGCCCCTAAGGCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: NKPQEGAARPELHSPQAHQPPRN*PLRPPL
Trigger: GAGGGGAGGCCTTAGGGGGCAGTTTCTGGGAGGCTG...GTGGGCTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTTGTGGCTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CCATCTTGCCCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACCCGTGCGCCTGTAGTTaGCAGCCTCCCAGAAACTGC +
Preference number: 4 (lower is better)
Translates to: PSCPQPRLVPSLPVPSLDPCACS*QPPRNC
Trigger: GCAGTTTCTGGGAGGCTGGCAACTACAGGCGCACGG...GTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGGGCAAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CTCCCATCTTGCCCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTACCGTGCGCCTGTAGTTaGCAGCCTCCCAGAAACTGC +
Preference number: 4 (lower is better)
Translates to: LPSCPQPRLVPSLPVPSLPCACS*QPPRNC
Trigger: GCAGTTTCTGGGAGGCTGGCAACTACAGGCGCACGG...TAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGGGCAAGATGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp AAGCTGGGCTCTGAACCAGGGTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACCCACCCGCTGTACCGTaGGCCTGTAGTTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: KLGSEPGWVNVAEGLSGHPPAVP*ACSCQP
Trigger: AGGCTGGCAACTACAGGCGCACGGTACAGCGGGTGG...GTGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCTGGTTCAGAGCCCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCTCCAGGCCTTCTCCAGTGTaGCATACTGGGGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: QPRLVPSLPVPSLDKGPSRPSPV*HTGGPS
Trigger: AGAAGGGCCCCCAGTATGGCACACTGGAGAAGGCCT...GGAGGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCAGGCCTTCTCCAGTGTaGCATACTGGGGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PQPRLVPSLPVPSLDKGPRPSPV*HTGGPS
Trigger: AGAAGGGCCCCCAGTATGGCACACTGGAGAAGGCCT...GGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GCCCAGGCACCCCTGAACGCTTCTGTCACCTCTGACCTCCCATCTTGCCCTCAGGCCGTGAAAAAGGCATaGCAGGCCTTCTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: AQAPLNASVTSDLPSCPQAVKKA*QAFSSV
Trigger: CACACTGGAGAAGGCCTGGCATGCCTTTTTCACGGC...CTGAGGGCAAGATGGGAGGTCAGAGGTGACAGAAGCGTTCAGGGGTGCCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CCATCTTGCCCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACTCACTGTCCTGCCCTTaGAGCTTCTCCCGCACCTCC +
Preference number: 4 (lower is better)
Translates to: PSCPQPRLVPSLPVPSLDSLSCP*SFSRTS
Trigger: GGAGGTGCGGGAGAAGCTGCAAGGGCAGGACAGTGA...GTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGGGCAAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp AGGGTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACTCAGGCGCCCACACACTTCACTGTCCTGCCCTTaGAGCTTCTCCCGCACCTCC +
Preference number: 4 (lower is better)
Translates to: RVGKRCRRAVRTLRRPHTSLSCP*SFSRTS
Trigger: GGAGGTGCGGGAGAAGCTGCAAGGGCAGGACAGTGA...AGTGTGTGGGCGCCTGAGTGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR GCA 90 bp ACCCGAACCCCGGTGGCAGCCTTCCGGGGACTCTCTTCATCTGACCACTCCTCAGTAGCGATGCAGCTCTaGCAGCGTCTGCTCATACTG +
Preference number: 4 (lower is better)
Translates to: TRTPVAAFRGLSSSDHSSVAMQL*QRLLIL
Trigger: CAGTATGAGCAGACGCTGGCAGAGCTGCATCGCTAC...TGAGGAGTGGTCAGATGAAGAGAGTCCCCGGAAGGCTGCCACCGGGGTTCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR GCA 90 bp GCCCAGGCACCCCTGAACGCTTCTGTCACCTCTGACCTCCCATCTTGCCCTCAGGCCTCAATGCCCTGGTaGAAGTCACGGTGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: AQAPLNASVTSDLPSCPQASMPW*KSRWSS
Trigger: TGAACTCCACCGTGACTTGCACCAGGGCATTGAGGC...CTGAGGGCAAGATGGGAGGTCAGAGGTGACAGAAGCGTTCAGGGGTGCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CAGCTCATCAGCTTCCTGGCCAGCGTAGTCATAGAGTGCCCTCACCCGAACCCCCACTGGCTGCCTCAATaGCCTGGTGCAAGTCACGGT +
Preference number: 4 (lower is better)
Translates to: QLISFLASVVIECPHPNPHWLPQ*PGASHG
Trigger: ACCGTGACTTGCACCAGGGCATTGAGGCAGCCAGTG...GGGGTTCGGGTGAGGGCACTCTATGACTACGCTGGCCAGGAAGCTGATGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR GCA 90 bp CCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGCTCTTCGTCACTGGCTaGCTCAATGCCCTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: PGLPPSRDRGAARERRFRLFVTG*LNALVQ
Trigger: TTGCACCAGGGCATTGAGGCAGCCAGTGACGAAGAG...CCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp AGGGTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACTCAGGCGCCCACACACTCCAATGCGGCCACTCTaGAACTGGCCTTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: RVGKRCRRAVRTLRRPHTPMRPL*NWPWHQ
Trigger: CTGGTGCCAAGGCCAGTTGCAGAGTGGCCGCATTGG...AGTGTGTGGGCGCCTGAGTGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532457.5
ENST00000533686.5
CDS-3UTR GCA 90 bp CTCCCATCTTGCCCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTACAGGGTACAGGCCAATaGGGCCACTCTGCAACTGGC +
Preference number: 4 (lower is better)
Translates to: LPSCPQPRLVPSLPVPSLQGTGQ*GHSATG
Trigger: GCCAGTTGCAGAGTGGCCGCATTGGCCTGTACCCTG...TAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGGGCAAGATGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGGTGTCCAAGGACCAATaGCTCGAACTGTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LPPSRDRGAARERRFRALVSKDQ*LELWPV
Trigger: AACTGGCCACAGTTCGAGGCATTGGTCCTTGGACAC...CAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR CCA 90 bp GCTAGAACAAGCCACAAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGCCCCGCAGCACGGAATaGTGGCGGATTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ARTSHKRVLLGQNYTHPKPRSTE*WRIWGW
Trigger: CCAGCCCCAAATCCGCCACCATTCCGTGCTGCGGGG...CTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTTGTGGCTTGTTCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp TCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTGGAACTTCTCACTGCTaGAAAGGTCCAGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SLKGQRSSQRATVQGPEGGTSHC*KGPGAG
Trigger: ACCAGCACCTGGACCTTTCCAGCAGTGAGAAGTTCC...ACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGGGAACTTCTCACTGCTaGAAAGGTCCAGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LPPSRDRGAARERRFRALGTSHC*KGPGAG
Trigger: ACCAGCACCTGGACCTTTCCAGCAGTGAGAAGTTCC...CAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp TGCAGAAGGGCTGTCAGGACACTCAGGCGCCCACACACTCCACGTAGTTGGCAGGCTGCCTCAATGCCCTaGTGCAAGTCACGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: CRRAVRTLRRPHTPRSWQAASMP*CKSRWS
Trigger: ACTCCACCGTGACTTGCACCAGGGCATTGAGGCAGC...CTGCCAACTACGTGGAGTGTGTGGGCGCCTGAGTGTCCTGACAGCCCTTCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR CCA 90 bp GCCCAGGCACCCCTGAACGCTTCTGTCACCTCTGACCTCCCATCTTGCCCTCAGGATCCTCTTCGTCACTaGCTGCCTCAATGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: AQAPLNASVTSDLPSCPQDPLRH*LPQCPG
Trigger: ACCAGGGCATTGAGGCAGCCAGTGACGAAGAGGATC...CTGAGGGCAAGATGGGAGGTCAGAGGTGACAGAAGCGTTCAGGGGTGCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GCTAGAACAAGCCACAAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGCGGCCACTCTGCAACTaGCCTTGGCACCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ARTSHKRVLLGQNYTHPKRPLCN*PWHQPC
Trigger: GCAGGGCTGGTGCCAAGGCCAGTTGCAGAGTGGCCG...CTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTTGTGGCTTGTTCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR TCA 90 bp GCAGAAGGGCTGTCAGGACACTCAGGCGCCCACACACTCCACGTAGTTGGCAGGAGCGTCTGCTCATACTaGGCTTTTGTCTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: AEGLSGHSGAHTLHVVGRSVCSY*AFVFSA
Trigger: GGCCGAGAAGACAAAAGCTCAGTATGAGCAGACGCT...CCTGCCAACTACGTGGAGTGTGTGGGCGCCTGAGTGTCCTGACAGCCCTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR TCA 90 bp GCCCAGGCACCCCTGAACGCTTCTGTCACCTCTGACCTCCCATCTTGCCCTCAGAGCGTCTGCTCATACTaGGCTTTTGTCTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: AQAPLNASVTSDLPSCPQSVCSY*AFVFSA
Trigger: GGCCGAGAAGACAAAAGCTCAGTATGAGCAGACGCT...CTGAGGGCAAGATGGGAGGTCAGAGGTGACAGAAGCGTTCAGGGGTGCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR TCA 90 bp CCATCTTGCCCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACCGCTTCTGTCACCTCTaGCCTCCCATCTTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PSCPQPRLVPSLPVPSLDRFCHL*PPILPS
Trigger: TGAGGGCAAGATGGGAGGTCAGAGGTGACAGAAGCG...GTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGGGCAAGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GCTAGAACAAGCCACAAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGTGCAGTTTGCGCAGCTaGTCCTGGGAGACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: ARTSHKRVLLGQNYTHPKCSLRS*SWETAL
Trigger: CAGCGCCGTCTCCCAGGAGCAGCTGCGCAAACTGCA...CTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTTGTGGCTTGTTCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp AGGGCTGTCAGGACACTCAGGCGCCCACACACTCCACGTAGTTGGCAGGGTACACTCTTCGTCACTGGCTaGCTCAATGCCCTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: RAVRTLRRPHTPRSWQGTLFVTG*LNALVQ
Trigger: TTGCACCAGGGCATTGAGGCAGCCAGTGACGAAGAG...TGTACCCTGCCAACTACGTGGAGTGTGTGGGCGCCTGAGTGTCCTGACAGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR GCA 90 bp AACAAGCCACAAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGCCCACCCAATGCGGCCACTCTaGAACTGGCCTTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: NKPQEGAARPELHSPQAHPMRPL*NWPWHQ
Trigger: CTGGTGCCAAGGCCAGTTGCAGAGTGGCCGCATTGG...GTGGGCTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTTGTGGCTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp AACAAGCCACAAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGCCCACCAGGGTACAGGCCAATaGGGCCACTCTGCAACTGGC +
Preference number: 4 (lower is better)
Translates to: NKPQEGAARPELHSPQAHQGTGQ*GHSATG
Trigger: GCCAGTTGCAGAGTGGCCGCATTGGCCTGTACCCTG...GTGGGCTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTTGTGGCTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGAGGGTGGGTAAACGTTaGAGAAGGGCTGTCAGGACA +
Preference number: 4 (lower is better)
Translates to: PGLPPSRDRGAARERRFRRVGKR*RRAVRT
Trigger: TGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCT...CCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCTCCTCTGACCTCCCATCTTaGCCTCAGCCTAGACTCGTC +
Preference number: 4 (lower is better)
Translates to: QPRLVPSLPVPSLDKGPSSDLPS*PQPRLV
Trigger: GACGAGTCTAGGCTGAGGGCAAGATGGGAGGTCAGA...GGAGGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CTGGGCTCTGAACCAGGGTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACTCACCTCTTCTGGAGCCATaGTGTCCCCGCAGCACGGAA +
Preference number: 4 (lower is better)
Translates to: LGSEPGWVNVAEGLSGHSPLLEP*CPRSTE
Trigger: TTCCGTGCTGCGGGGACACCATGGCTCCAGAAGAGG...TGAGTGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCTGGTTCAGAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR CCA 90 bp CTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGCGTGGTAGCTTTTCTTaGAAGCCTCAACCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LKGQRSSQRATVQGPEGPRGSFS*KPQPPS
Trigger: TGAAGGAGGTTGAGGCTTCCAAGAAAAGCTACCACG...CGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CTCCCATCTTGCCCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTATGGCTCTCCCTCGTCTaGGCGGTCTTCTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: LPSCPQPRLVPSLPVPSLWLSLV*AVFSSF
Trigger: GAAGGATGAGAAGACCGCCCAGACGAGGGAGAGCCA...TAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGGGCAAGATGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CCATCTTGCCCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACTCTTCTCGGCCTCCTTaGCACAGCGTTCCACCCGTT +
Preference number: 4 (lower is better)
Translates to: PSCPQPRLVPSLPVPSLDSSRPP*HSVPPV
Trigger: AACGGGTGGAACGCTGTGCCAAGGAGGCCGAGAAGA...GTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGGGCAAGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GCTAGAACAAGCCACAAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGAAGAAAAGAAGCCGCTaGCGCTCGGCGGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ARTSHKRVLLGQNYTHPKKKRSR*RSAAWQ
Trigger: CTGCCAGGCCGCCGAGCGCCAGCGGCTTCTTTTCTT...CTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTTGTGGCTTGTTCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGTGGTGCAAGTCACGGTaGAGTTCATGGAACTTCTCA +
Preference number: 4 (lower is better)
Translates to: PPSRDRGAARERRFRALRWCKSR*SSWNFS
Trigger: TGAGAAGTTCCATGAACTCCACCGTGACTTGCACCA...CCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GCTAGAACAAGCCACAAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGTCACTGTCCTGCCCTTaGAGCTTCTCCCGCACCTCC +
Preference number: 4 (lower is better)
Translates to: ARTSHKRVLLGQNYTHPKSLSCP*SFSRTS
Trigger: GGAGGTGCGGGAGAAGCTGCAAGGGCAGGACAGTGA...CTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTTGTGGCTTGTTCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GCTAGAACAAGCCACAAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGCAGCAGCTCCTCCCCTaGTCGGAAGCTCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: ARTSHKRVLLGQNYTHPKQQLLP*SEAQLI
Trigger: GATGAGCTGAGCTTCCGAGCAGGGGAGGAGCTGCTG...CTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTTGTGGCTTGTTCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GCTAGAACAAGCCACAAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGCCTCTTCTGGAGCCATaGTGTCCCCGCAGCACGGAA +
Preference number: 4 (lower is better)
Translates to: ARTSHKRVLLGQNYTHPKPLLEP*CPRSTE
Trigger: TTCCGTGCTGCGGGGACACCATGGCTCCAGAAGAGG...CTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTTGTGGCTTGTTCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp AGCTTCCTGGCCAGCGTAGTCATAGAGTGCCCTCACCCGAACCCCGGTGGCAGCCGTGGTAGCTTTTCTTaGAAGCCTCAACCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SFLASVVIECPHPNPGGSRGSFS*KPQPPS
Trigger: TGAAGGAGGTTGAGGCTTCCAAGAAAAGCTACCACG...GCTGCCACCGGGGTTCGGGTGAGGGCACTCTATGACTACGCTGGCCAGGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR CCA 90 bp CTCCCATCTTGCCCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGTCCTCCATGTAGCGTaGAGTGTAGCGATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPSCPQPRLVPSLPVPSLVLHVA*SVAMQL
Trigger: GAGCTGCATCGCTACACTCCACGCTACATGGAGGAC...TAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGGGCAAGATGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GCCCAGGCACCCCTGAACGCTTCTGTCACCTCTGACCTCCCATCTTGCCCTCAGGAAAGGTCCAGGTGCTaGTGTAAGGTGAGCAGCATA +
Preference number: 4 (lower is better)
Translates to: AQAPLNASVTSDLPSCPQERSRC*CKVSSI
Trigger: TATGCTGCTCACCTTACACCAGCACCTGGACCTTTC...CTGAGGGCAAGATGGGAGGTCAGAGGTGACAGAAGCGTTCAGGGGTGCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCTCCGGAACTTCTCACTGCTaGAAAGGTCCAGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QPRLVPSLPVPSLDKGPSGTSHC*KGPGAG
Trigger: ACCAGCACCTGGACCTTTCCAGCAGTGAGAAGTTCC...GGAGGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp TCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTTCACGGTGGAGTTCATaGAACTTCTCACTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: SLKGQRSSQRATVQGPEGSRWSS*NFSLLE
Trigger: TTCCAGCAGTGAGAAGTTCCATGAACTCCACCGTGA...ACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTCACGGTGGAGTTCATaGAACTTCTCACTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: DFLPQGTEEQPESDGSGPSRWSS*NFSLLE
Trigger: TTCCAGCAGTGAGAAGTTCCATGAACTCCACCGTGA...GGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp TCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGTGGTGCAAGTCACGGTaGAGTTCATGGAACTTCTCA +
Preference number: 4 (lower is better)
Translates to: SSLKGQRSSQRATVQGPEWCKSR*SSWNFS
Trigger: TGAGAAGTTCCATGAACTCCACCGTGACTTGCACCA...CTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR TCA 90 bp GCTAGAACAAGCCACAAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGGGGACTCTCTTCATCTaGCCACTCCTCATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ARTSHKRVLLGQNYTHPKGTLFI*PLLILP
Trigger: GGGCAGGATGAGGAGTGGTCAGATGAAGAGAGTCCC...CTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTTGTGGCTTGTTCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp AACAAGCCACAAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGCCCACGCCGTGAAAAAGGCATaGCAGGCCTTCTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: NKPQEGAARPELHSPQAHAVKKA*QAFSSV
Trigger: CACACTGGAGAAGGCCTGGCATGCCTTTTTCACGGC...GTGGGCTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTTGTGGCTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CTCCCATCTTGCCCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTACTCATCCTTCCGGGCTaGGTGGTAGCTTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: LPSCPQPRLVPSLPVPSLLILPG*VVAFLG
Trigger: TCCAAGAAAAGCTACCACGCAGCCCGGAAGGATGAG...TAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGGGCAAGATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp CCATCTTGCCCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACAGGGTGGGTAAACGTTaGAGAAGGGCTGTCAGGACA +
Preference number: 4 (lower is better)
Translates to: PSCPQPRLVPSLPVPSLDRVGKR*RRAVRT
Trigger: TGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCT...GTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGGGCAAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GCTAGAACAAGCCACAAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGTGGCTCTCCCTCGTCTaGGCGGTCTTCTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: ARTSHKRVLLGQNYTHPKWLSLV*AVFSSF
Trigger: GAAGGATGAGAAGACCGCCCAGACGAGGGAGAGCCA...CTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTTGTGGCTTGTTCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp CCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCGAAAGGTCCAGGTGCTaGTGTAAGGTGAGCAGCATA +
Preference number: 4 (lower is better)
Translates to: PQPRLVPSLPVPSLDKGPERSRC*CKVSSI
Trigger: TATGCTGCTCACCTTACACCAGCACCTGGACCTTTC...GGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp AAGCTGGGCTCTGAACCAGGGTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACCTCATCCTTCCGGGCTaGGTGGTAGCTTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: KLGSEPGWVNVAEGLSGHLILPG*VVAFLG
Trigger: TCCAAGAAAAGCTACCACGCAGCCCGGAAGGATGAG...GTGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCTGGTTCAGAGCCCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp GCTAGAACAAGCCACAAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGGTAGCGATGCAGCTCTaGCAGCGTCTGCTCATACTG +
Preference number: 4 (lower is better)
Translates to: ARTSHKRVLLGQNYTHPKVAMQL*QRLLIL
Trigger: CAGTATGAGCAGACGCTGGCAGAGCTGCATCGCTAC...CTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTTGTGGCTTGTTCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR GCA 90 bp AGGGTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACTCAGGCGCCCACACACTCATGGAACTTCTCACTaGTGGAAAGGTCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RVGKRCRRAVRTLRRPHTHGTSH*WKGPGA
Trigger: AGCACCTGGACCTTTCCAGCAGTGAGAAGTTCCATG...AGTGTGTGGGCGCCTGAGTGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR CCA 90 bp CAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCTCCCGTGGTAGCTTTTCTTaGAAGCCTCAACCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QPRLVPSLPVPSLDKGPSRGSFS*KPQPPS
Trigger: TGAAGGAGGTTGAGGCTTCCAAGAAAAGCTACCACG...GGAGGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CCA 90 bp GTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACTCAGGCGCCCACACACTCCAGAAAGGTCCAGGTGCTaGTGTAAGGTGAGCAGCATA +
Preference number: 4 (lower is better)
Translates to: VGKRCRRAVRTLRRPHTPERSRC*CKVSSI
Trigger: TATGCTGCTCACCTTACACCAGCACCTGGACCTTTC...TGGAGTGTGTGGGCGCCTGAGTGTCCTGACAGCCCTTCTGCAACGTTTACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR CCA 90 bp CAGCTCATCAGCTTCCTGGCCAGCGTAGTCATAGAGTGCCCTCACCCGAACCCCTGGTGCAAGTCACGGTaGAGTTCATGGAACTTCTCA +
Preference number: 4 (lower is better)
Translates to: QLISFLASVVIECPHPNPWCKSR*SSWNFS
Trigger: TGAGAAGTTCCATGAACTCCACCGTGACTTGCACCA...GGGGTTCGGGTGAGGGCACTCTATGACTACGCTGGCCAGGAAGCTGATGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR CCA 90 bp AAGCTGGGCTCTGAACCAGGGTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACTCACGGTGGAGTTCATaGAACTTCTCACTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: KLGSEPGWVNVAEGLSGHSRWSS*NFSLLE
Trigger: TTCCAGCAGTGAGAAGTTCCATGAACTCCACCGTGA...GTGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCTGGTTCAGAGCCCAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR TCA 90 bp TTTTTGTGTGTGGGTGTGTGTCAAGTTTTAATACACGCTAGAACAAGCCACAAGGCTCCTGGAAGCAGCTaGCCAGGTCCCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: FLCVGVCQVLIHARTSHKAPGSS*PGPRTA
Trigger: GGCTGTGCGGGGACCTGGTCAGCTGCTTCCAGGAGC...CTTGTGGCTTGTTCTAGCGTGTATTAAAACTTGACACACACCCACACACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298838.11
CDS-3UTR TCA 90 bp TTTTTGTGTGTGGGTGTGTGTCAAGTTTTAATACACGCTAGAACAAGCCACAAGGCCGCTCAGCCGCCGTaGAAAAGGCATGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: FLCVGVCQVLIHARTSHKAAQPP*KRHARP
Trigger: AGGCCTGGCATGCCTTTTTCACGGCGGCTGAGCGGC...CTTGTGGCTTGTTCTAGCGTGTATTAAAACTTGACACACACCCACACACAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298838.11
CDS-3UTR GCA 90 bp TTTTTGTGTGTGGGTGTGTGTCAAGTTTTAATACACGCTAGAACAAGCCACAAGCCTTGGCACCAGCCCTaGTCGTCCTCCTCACTCATC +
Preference number: 4 (lower is better)
Translates to: FLCVGVCQVLIHARTSHKPWHQP*SSSSLI
Trigger: GATGAGTGAGGAGGACGAGCAGGGCTGGTGCCAAGG...CTTGTGGCTTGTTCTAGCGTGTATTAAAACTTGACACACACCCACACACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298838.11
CDS-3UTR GCA 90 bp TTTTTGTGTGTGGGTGTGTGTCAAGTTTTAATACACGCTAGAACAAGCCACAAGCTCATCCTTCCGGGCTaGGTGGTAGCTTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: FLCVGVCQVLIHARTSHKLILPG*VVAFLG
Trigger: TCCAAGAAAAGCTACCACGCAGCCCGGAAGGATGAG...CTTGTGGCTTGTTCTAGCGTGTATTAAAACTTGACACACACCCACACACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298838.11
CDS-3UTR GCA 90 bp TTTTTGTGTGTGGGTGTGTGTCAAGTTTTAATACACGCTAGAACAAGCCACAAGAGGGTGGGTAAACGTTaGAGAAGGGCTGTCAGGACA +
Preference number: 4 (lower is better)
Translates to: FLCVGVCQVLIHARTSHKRVGKR*RRAVRT
Trigger: TGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCT...CTTGTGGCTTGTTCTAGCGTGTATTAAAACTTGACACACACCCACACACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298838.11
CDS-3UTR GCA 90 bp TTTTTGTGTGTGGGTGTGTGTCAAGTTTTAATACACGCTAGAACAAGCCACAAGCATGGAACTTCTCACTaGTGGAAAGGTCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: FLCVGVCQVLIHARTSHKHGTSH*WKGPGA
Trigger: AGCACCTGGACCTTTCCAGCAGTGAGAAGTTCCATG...CTTGTGGCTTGTTCTAGCGTGTATTAAAACTTGACACACACCCACACACAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298838.11
CDS GCA 90 bp CCTTATGGACCGCGCCCCTCGACAGGACCCCTTGCCGCCCGGAGCTaGATAACTCGGAGCCCGTGGAGCCACGCGGAGCGGCAGGGCCAG +
Preference number: 5 (lower is better)
Translates to: PYGPRPSTGPLAARS*ITRSPWSHAERQGQ
Trigger: CTGGCCCTGCCGCTCCGCGTGGCTCCACGGGCTCCGAGTTATGCAGCTCCGGGCGGCAAGGGGTCCTGTCGAGGGGCGCGGTCCATAAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528462.5
ENST00000539589.5
CDS CCA 90 bp AGAGCTCGGCGCCCAGAGGCTACGCGCCTCTGGCCTCAACCCTTATaGACCGCGCCCCTCGACAGGACCCCTTGCCGCCCGGAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: RARRPEATRLWPQPL*TAPLDRTPCRPELH
Trigger: ATGCAGCTCCGGGCGGCAAGGGGTCCTGTCGAGGGGCGCGGTCCATAAGGGTTGAGGCCAGAGGCGCGTAGCCTCTGGGCGCCGAGCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528462.5
ENST00000539589.5
CDS CCA 90 bp CCCAGCCTCCACTCCAGAGCTCGGCGCCCAGAGGCTACGCGCCTCTaGCCTCAACCCTTATGGACCGCGCCCCTCGACAGGACCCCTTGC +
Preference number: 5 (lower is better)
Translates to: PSLHSRARRPEATRL*PQPLWTAPLDRTPC
Trigger: GCAAGGGGTCCTGTCGAGGGGCGCGGTCCATAAGGGTTGAGGCCAGAGGCGCGTAGCCTCTGGGCGCCGAGCTCTGGAGTGGAGGCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528462.5
ENST00000539589.5
CDS GCA 90 bp CTCTGGCCTCAACCCTTATGGACCGCGCCCCTCGACAGGACCCCTTaGCGCCCGGAGCTGCATAACTCGGAGCCCGTGGAGCCACGCGGA +
Preference number: 5 (lower is better)
Translates to: LWPQPLWTAPLDRTP*RPELHNSEPVEPRG
Trigger: TCCGCGTGGCTCCACGGGCTCCGAGTTATGCAGCTCCGGGCGGCAAGGGGTCCTGTCGAGGGGCGCGGTCCATAAGGGTTGAGGCCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528462.5
ENST00000539589.5
CDS GCA 90 bp TTCCAGAAGCTGGGGGCTTGCCCCTGGGAGGGAGCTCAGCCATTCTaGCTGGCCCATCCCTGGAACCTGAGTCACAGGCTGCGCCCAAGG +
Preference number: 5 (lower is better)
Translates to: FQKLGACPWEGAQPF*LAHPWNLSHRLRPR
Trigger: CCTTGGGCGCAGCCTGTGACTCAGGTTCCAGGGATGGGCCAGGCAGAATGGCTGAGCTCCCTCCCAGGGGCAAGCCCCCAGCTTCTGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525725.5
CDS-3UTR CAA 90 bp CTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGTCTTCTCGGCCTCCTaGGCACAGCGTTCCACCCGT +
Preference number: 5 (lower is better)
Translates to: LKGQRSSQRATVQGPEGPVFSAS*AQRSTR
Trigger: ACGGGTGGAACGCTGTGCCAAGGAGGCCGAGAAGAC...CGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CAA 90 bp GACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCCTCACTGTCCTGCCCTaGCAGCTTCTCCCGCACCTC +
Preference number: 5 (lower is better)
Translates to: DFLPQGTEEQPESDGSGPLTVLP*QLLPHL
Trigger: GAGGTGCGGGAGAAGCTGCAAGGGCAGGACAGTGAG...GGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CAA 90 bp CCTGGGTCCCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACCTCACTGTCCTGCCCTaGCAGCTTCTCCCGCACCTC +
Preference number: 5 (lower is better)
Translates to: PGSQDFLPQGTEEQPESDLTVLP*QLLPHL
Trigger: GAGGTGCGGGAGAAGCTGCAAGGGCAGGACAGTGAG...GTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGGGACCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CAA 90 bp CTGGGTCCCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGACCCGTTCCTGCAGTTaGCGCAGCTGCTCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: LGPRTSSLKGQRSSQRATTRSCS*RSCSWE
Trigger: CTCCCAGGAGCAGCTGCGCAAACTGCAGGAACGGGT...CGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGGGACCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CAA 90 bp ACAGCTCCTGGGGAGGCCCAGGCACCCCTGAACGCTTCTGTCACCTCTGACCTCACTCTGCAACTGGCCTaGGCACCAGCCCTGCTCGTC +
Preference number: 5 (lower is better)
Translates to: TAPGEAQAPLNASVTSDLTLQLA*APALLV
Trigger: GACGAGCAGGGCTGGTGCCAAGGCCAGTTGCAGAGT...GAGGTCAGAGGTGACAGAAGCGTTCAGGGGTGCCTGGGCCTCCCCAGGAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS CCA 90 bp CTGGCCCGTGGGTGCTGCGCCACCAGCGCAGATCCTCTTCGTCACTaGCTGCCTCAATGCCCTGGTGCAAGTCACGGTGGAGTTCATGGA +
Preference number: 5 (lower is better)
Translates to: LARGCCATSADPLRH*LPQCPGASHGGVHG
Trigger: TCCATGAACTCCACCGTGACTTGCACCAGGGCATTGAGGCAGCCAGTGACGAAGAGGATCTGCGCTGGTGGCGCAGCACCCACGGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000528462.5
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CAA 90 bp CCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGCTCACTGTCCTGCCCTaGCAGCTTCTCCCGCACCTC +
Preference number: 5 (lower is better)
Translates to: PGLPPSRDRGAARERRFRLTVLP*QLLPHL
Trigger: GAGGTGCGGGAGAAGCTGCAAGGGCAGGACAGTGAG...CCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CAA 90 bp CCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGTCTTCTCGGCCTCCTaGGCACAGCGTTCCACCCGT +
Preference number: 5 (lower is better)
Translates to: PGLPPSRDRGAARERRFRVFSAS*AQRSTR
Trigger: ACGGGTGGAACGCTGTGCCAAGGAGGCCGAGAAGAC...CCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CAA 90 bp CAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGACAAAGGCCCCTCCACCCGTTCCTGCAGTTaGCGCAGCTGCTCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: QPRLVPSLPVPSLDKGPSTRSCS*RSCSWE
Trigger: CTCCCAGGAGCAGCTGCGCAAACTGCAGGAACGGGT...GGAGGGGCCTTTGTCTAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CAA 90 bp GACAGAGGAGCAGCCAGAGAGCGACGGTTCAGGGCCCTGAGGGTCCGGCTCTCCGCTCATACTGAGCTTTaGTCTTCTCGGCCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: DRGAARERRFRALRVRLSAHTEL*SSRPPW
Trigger: CCAAGGAGGCCGAGAAGACAAAAGCTCAGTATGAGC...GGAGAGCCGGACCCTCAGGGCCCTGAACCGTCGCTCTCTGGCTGCTCCTCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CAA 90 bp AGGGCTGTCAGGACACTCAGGCGCCCACACACTCCACGTAGTTGGCAGGGTACAACTCTGCAACTGGCCTaGGCACCAGCCCTGCTCGTC +
Preference number: 5 (lower is better)
Translates to: RAVRTLRRPHTPRSWQGTTLQLA*APALLV
Trigger: GACGAGCAGGGCTGGTGCCAAGGCCAGTTGCAGAGT...TGTACCCTGCCAACTACGTGGAGTGTGTGGGCGCCTGAGTGTCCTGACAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532457.5
ENST00000533686.5
CDS TCA 90 bp AGGACAGTGTCTATCTTCAGTCACCGACAGAGGCTTCCAGGATTCTaGTTTGTGTGTCCCCACGCGCGCGTCCTCCCTGGGCCCCTCGGC +
Preference number: 5 (lower is better)
Translates to: RTVSIFSHRQRLPGF*FVCPHARVLPGPLG
Trigger: GCCGAGGGGCCCAGGGAGGACGCGCGCGTGGGGACACACAAATCAGAATCCTGGAAGCCTCTGTCGGTGACTGAAGATAGACACTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524509.1
CDS TCA 90 bp GATCACTTCAAGGACCCGGGTGTCCAACTCTCAATGCTGCCACCGTaGCTCTGCCTTGAAGGAGAACAGAGCGGGGGTGAGGGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: DHFKDPGVQLSMLPP*LCLEGEQSGGEGGG
Trigger: GCCCCCACCCTCACCCCCGCTCTGTTCTCCTTCAAGGCAGAGTCACGGTGGCAGCATTGAGAGTTGGACACCCGGGTCCTTGAAGTGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000530405.5
CDS GCA 90 bp CCCGTGGGTGCTGCGCCACCAGCGCAGATCCTCTTCGTCACTGGCTaGCTCAATGCCCTGGTGCAAGTCACGGTGGAGTTCATGGAACTT +
Preference number: 5 (lower is better)
Translates to: PVGAAPPAQILFVTG*LNALVQVTVEFMEL
Trigger: AAGTTCCATGAACTCCACCGTGACTTGCACCAGGGCATTGAGGCAGCCAGTGACGAAGAGGATCTGCGCTGGTGGCGCAGCACCCACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000528462.5
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CAA 90 bp CCCCGGTGGCAGCCTTCCGGGGACTCTCTTCATCTGACCACTCCTCATCCTGCCGCTCATACTGAGCTTTaGTCTTCTCGGCCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: PRWQPSGDSLHLTTPHPAAHTEL*SSRPPW
Trigger: CCAAGGAGGCCGAGAAGACAAAAGCTCAGTATGAGC...GGCAGGATGAGGAGTGGTCAGATGAAGAGAGTCCCCGGAAGGCTGCCACCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS-3UTR CAA 90 bp CTGGGCTCTGAACCAGGGTGGGTAAACGTTGCAGAAGGGCTGTCAGGACACTCAACTCTGCAACTGGCCTaGGCACCAGCCCTGCTCGTC +
Preference number: 5 (lower is better)
Translates to: LGSEPGWVNVAEGLSGHSTLQLA*APALLV
Trigger: GACGAGCAGGGCTGGTGCCAAGGCCAGTTGCAGAGT...TGAGTGTCCTGACAGCCCTTCTGCAACGTTTACCCACCCTGGTTCAGAGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532457.5
ENST00000533686.5
CDS GCA 90 bp TGCTGCGCCACCAGCGCAGATCCTCTTCGTCACTGGCTGCCTCAATaGCCTGGTGCAAGTCACGGTGGAGTTCATGGAACTTCTCACTGC +
Preference number: 5 (lower is better)
Translates to: CCATSADPLRHWLPQ*PGASHGGVHGTSHC
Trigger: GCAGTGAGAAGTTCCATGAACTCCACCGTGACTTGCACCAGGGCATTGAGGCAGCCAGTGACGAAGAGGATCTGCGCTGGTGGCGCAGCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000528462.5
ENST00000532457.5
ENST00000539589.5
CDS GCA 90 bp GGCCTAGAGATCACTTCAAGGACCCGGGTGTCCAACTCTCAATGCTaGCACCGTGACTCTGCCTTGAAGGAGAACAGAGCGGGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: GLEITSRTRVSNSQC*HRDSALKENRAGVR
Trigger: CCTCACCCCCGCTCTGTTCTCCTTCAAGGCAGAGTCACGGTGGCAGCATTGAGAGTTGGACACCCGGGTCCTTGAAGTGATCTCTAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530405.5
CDS GCA 90 bp TGGGGCCTAGAGATCACTTCAAGGACCCGGGTGTCCAACTCTCAATaGTGCCACCGTGACTCTGCCTTGAAGGAGAACAGAGCGGGGGTG +
Preference number: 5 (lower is better)
Translates to: WGLEITSRTRVSNSQ*CHRDSALKENRAGV
Trigger: CACCCCCGCTCTGTTCTCCTTCAAGGCAGAGTCACGGTGGCAGCATTGAGAGTTGGACACCCGGGTCCTTGAAGTGATCTCTAGGCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530405.5
CDS-3UTR CAA 90 bp GCTAGAACAAGCCACAAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGGTCTTCTCGGCCTCCTaGGCACAGCGTTCCACCCGT +
Preference number: 5 (lower is better)
Translates to: ARTSHKRVLLGQNYTHPKVFSAS*AQRSTR
Trigger: ACGGGTGGAACGCTGTGCCAAGGAGGCCGAGAAGAC...CTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTTGTGGCTTGTTCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CAA 90 bp CCTGGGTCCCAGGACTTCCTCCCTCAAGGGACAGAGGAGCAGCCAGAGAGCGACGTGAGCAGCATATCCTaGAAGAAAAGAAGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: PGSQDFLPQGTEEQPESDVSSIS*KKRSRW
Trigger: CCAGCGGCTTCTTTTCTTCAAGGATATGCTGCTCAC...GTCGCTCTCTGGCTGCTCCTCTGTCCCTTGAGGGAGGAAGTCCTGGGACCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CAA 90 bp CCCCGGTGGCAGCCTTCCGGGGACTCTCTTCATCTGACCACTCCTCATCCTGCCGTGAGCAGCATATCCTaGAAGAAAAGAAGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: PRWQPSGDSLHLTTPHPAVSSIS*KKRSRW
Trigger: CCAGCGGCTTCTTTTCTTCAAGGATATGCTGCTCAC...GGCAGGATGAGGAGTGGTCAGATGAAGAGAGTCCCCGGAAGGCTGCCACCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532457.5
CDS TCA 90 bp CCGGGTGACCCTTCAGCCGGGGTGTATAACCCATGGAGTTGTGGCTaGCAGGACAGTGTCTATCTTCAGTCACCGACAGAGGCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: PGDPSAGVYNPWSCG*QDSVYLQSPTEASR
Trigger: CCTGGAAGCCTCTGTCGGTGACTGAAGATAGACACTGTCCTGTCAGCCACAACTCCATGGGTTATACACCCCGGCTGAAGGGTCACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524509.1
CDS CCA 90 bp CGCCACCAGCGCAGATCCTCTTCGTCACTGGCTGCCTCAATGCCCTaGTGCAAGTCACGGTGGAGTTCATGGAACTTCTCACTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: RHQRRSSSSLAASMP*CKSRWSSWNFSLLE
Trigger: TTCCAGCAGTGAGAAGTTCCATGAACTCCACCGTGACTTGCACCAGGGCATTGAGGCAGCCAGTGACGAAGAGGATCTGCGCTGGTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000528462.5
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CAA 90 bp CTCCCATCTTGCCCTCAGCCTAGACTCGTCCCTTCCCTACCAGTCCCTTCCCTAGCTCATACTGAGCTTTaGTCTTCTCGGCCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: LPSCPQPRLVPSLPVPSLAHTEL*SSRPPW
Trigger: CCAAGGAGGCCGAGAAGACAAAAGCTCAGTATGAGC...TAGGGAAGGGACTGGTAGGGAAGGGACGAGTCTAGGCTGAGGGCAAGATGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS GCA 90 bp AATATAGCAACTGCTGTCAGAAGCGCCGGATTCCAGGGAGGAGAATaGCAGGCAGGTCACACGATCCAGCCAGGGATTAAATGGCAGGCG +
Preference number: 5 (lower is better)
Translates to: NIATAVRSAGFQGGE*QAGHTIQPGIKWQA
Trigger: CGCCTGCCATTTAATCCCTGGCTGGATCGTGTGACCTGCCTGGCATTCTCCTCCCTGGAATCCGGCGCTTCTGACAGCAGTTGCTATATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530405.5
CDS GCA 90 bp CTGTTCCATGTCCTCCATGTAGCGTGGAGTGTAGCGATGCAGCTCTaGCAGCGTCTGCTCATACTGAGCTTTTGTCTTCTCGGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: LFHVLHVAWSVAMQL*QRLLILSFCLLGLL
Trigger: AAGGAGGCCGAGAAGACAAAAGCTCAGTATGAGCAGACGCTGGCAGAGCTGCATCGCTACACTCCACGCTACATGGAGGACATGGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298838.11
ENST00000528201.1
ENST00000528462.5
ENST00000530513.5
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CAA 90 bp GCTAGAACAAGCCACAAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGGTGAGCAGCATATCCTaGAAGAAAAGAAGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: ARTSHKRVLLGQNYTHPKVSSIS*KKRSRW
Trigger: CCAGCGGCTTCTTTTCTTCAAGGATATGCTGCTCAC...CTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTTGTGGCTTGTTCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298838.11
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CAA 90 bp AAGAGGGTGCTGCTAGGCCAGAACTACACTCACCCCAAGCCCACCCCAGGAACCGAAGCTCTAGACTTCTaGGCCAAACTTGTTGAACTT +
Preference number: 5 (lower is better)
Translates to: KRVLLGQNYTHPKPTPGTEALDF*AKLVEL
Trigger: AAGTTCAACAAGTTTGGCCAAGAAGTCTAGAGCTTC...GGTTCCTGGGGTGGGCTTGGGGTGAGTGTAGTTCTGGCCTAGCAGCACCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539589.5
CDS CCA 90 bp CGGTGGAGTTCATGGAACTTCTCACTGCTGGAAAGGTCCAGGTGCTaGTGTAAGGTGAGCAGCATATCCTTGAAGAAAAGAAGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: RWSSWNFSLLERSRC*CKVSSISLKKRSRW
Trigger: CCAGCGGCTTCTTTTCTTCAAGGATATGCTGCTCACCTTACACCAGCACCTGGACCTTTCCAGCAGTGAGAAGTTCCATGAACTCCACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298838.11
ENST00000528462.5
ENST00000530513.5
ENST00000532457.5
ENST00000539589.5
CDS GCA 90 bp TCACGGTGGAGTTCATGGAACTTCTCACTGCTGGAAAGGTCCAGGTaGTGGTGTAAGGTGAGCAGCATATCCTTGAAGAAAAGAAGCCGC +
Preference number: 5 (lower is better)
Translates to: SRWSSWNFSLLERSR*WCKVSSISLKKRSR
Trigger: GCGGCTTCTTTTCTTCAAGGATATGCTGCTCACCTTACACCAGCACCTGGACCTTTCCAGCAGTGAGAAGTTCCATGAACTCCACCGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298838.11
ENST00000528462.5
ENST00000530513.5
ENST00000532457.5
ENST00000539589.5
CDS-3UTR CAA 90 bp TTTTTGTGTGTGGGTGTGTGTCAAGTTTTAATACACGCTAGAACAAGCCACAAGACTCTGCAACTGGCCTaGGCACCAGCCCTGCTCGTC +
Preference number: 5 (lower is better)
Translates to: FLCVGVCQVLIHARTSHKTLQLA*APALLV
Trigger: GACGAGCAGGGCTGGTGCCAAGGCCAGTTGCAGAGT...CTTGTGGCTTGTTCTAGCGTGTATTAAAACTTGACACACACCCACACACAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298838.11
CDS GCA 72 bp CCGCGCCCCTCGACAGGACCCCTTGCCGCCCGGAGCTaGATAACTCGGAGCCCGTGGAGCCACGCGGAGCGG +
Preference number: 6 (lower is better)
Translates to: PRPSTGPLAARS*ITRSPWSHAER
Trigger: CCGCTCCGCGTGGCTCCACGGGCTCCGAGTTATGCAGCTCCGGGCGGCAAGGGGTCCTGTCGAGGGGCGCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528462.5
ENST00000539589.5
CDS GCA 72 bp CGCTGCCAGGCGCGCACCCGCTCACTGTCCTGCCCTTaGAGCTTCTCCCGCACCTCCAGGTGCAGCGCGCTC +
Preference number: 6 (lower is better)
Translates to: RCQARTRSLSCP*SFSRTSRCSAL
Trigger: GAGCGCGCTGCACCTGGAGGTGCGGGAGAAGCTGCAAGGGCAGGACAGTGAGCGGGTGCGCGCCTGGCAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298838.11
ENST00000525725.5
ENST00000528201.1
ENST00000528462.5
ENST00000530513.5
ENST00000531226.5
ENST00000532457.5
ENST00000539589.5
CDS CCA 72 bp CGCCCAGAGGCTACGCGCCTCTGGCCTCAACCCTTATaGACCGCGCCCCTCGACAGGACCCCTTGCCGCCCG +
Preference number: 6 (lower is better)
Translates to: RPEATRLWPQPL*TAPLDRTPCRP
Trigger: CGGGCGGCAAGGGGTCCTGTCGAGGGGCGCGGTCCATAAGGGTTGAGGCCAGAGGCGCGTAGCCTCTGGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528462.5
ENST00000539589.5
CDS GCA 72 bp CGCACAGCCGGTGCCCGTCCTCCACCCGCTGTACCGTaGGCCTGTAGTTGCCAGCCTCCCAGAAACTGCCCC +
Preference number: 6 (lower is better)
Translates to: RTAGARPPPAVP*ACSCQPPRNCP
Trigger: GGGGCAGTTTCTGGGAGGCTGGCAACTACAGGCGCACGGTACAGCGGGTGGAGGACGGGCACCGGCTGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298838.11
ENST00000524509.1
ENST00000525725.5
ENST00000528462.5
ENST00000530405.5
ENST00000531226.5
ENST00000532457.5
ENST00000539589.5
CDS GCA 72 bp GCTGCCACCGTGACTCTGCCTGCCGGCCGGGGTGCCTaGTTCCAGATGACGCACTCCGAACCCCAGCCTCCA +
Preference number: 6 (lower is better)
Translates to: AATVTLPAGRGA*FQMTHSEPQPP
Trigger: TGGAGGCTGGGGTTCGGAGTGCGTCATCTGGAAGCAGGCACCCCGGCCGGCAGGCAGAGTCACGGTGGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528462.5
ENST00000539589.5
CDS CCA 72 bp CACTCCAGAGCTCGGCGCCCAGAGGCTACGCGCCTCTaGCCTCAACCCTTATGGACCGCGCCCCTCGACAGG +
Preference number: 6 (lower is better)
Translates to: HSRARRPEATRL*PQPLWTAPLDR
Trigger: CCTGTCGAGGGGCGCGGTCCATAAGGGTTGAGGCCAGAGGCGCGTAGCCTCTGGGCGCCGAGCTCTGGAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528462.5
ENST00000539589.5
CDS GCA 72 bp CAACCCTTATGGACCGCGCCCCTCGACAGGACCCCTTaGCGCCCGGAGCTGCATAACTCGGAGCCCGTGGAG +
Preference number: 6 (lower is better)
Translates to: QPLWTAPLDRTP*RPELHNSEPVE
Trigger: CTCCACGGGCTCCGAGTTATGCAGCTCCGGGCGGCAAGGGGTCCTGTCGAGGGGCGCGGTCCATAAGGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528462.5
ENST00000539589.5
CDS GCA 72 bp GCACAGCGTTCCACCCGTTCCTGCAGTTTGCGCAGCTaGTCCTGGGAGACGGCGCTGTCTGCCTTTGCGTGG +
Preference number: 6 (lower is better)
Translates to: AQRSTRSCSLRS*SWETALSAFAW
Trigger: CCACGCAAAGGCAGACAGCGCCGTCTCCCAGGAGCAGCTGCGCAAACTGCAGGAACGGGTGGAACGCTGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298838.11
ENST00000528201.1
ENST00000528462.5
ENST00000530513.5
ENST00000532457.5
ENST00000539589.5
CDS GCA 72 bp TTCTCGGCCTCCTTGGCACAGCGTTCCACCCGTTCCTaGAGTTTGCGCAGCTGCTCCTGGGAGACGGCGCTG +
Preference number: 6 (lower is better)
Translates to: FSASLAQRSTRS*SLRSCSWETAL
Trigger: CAGCGCCGTCTCCCAGGAGCAGCTGCGCAAACTGCAGGAACGGGTGGAACGCTGTGCCAAGGAGGCCGAGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298838.11
ENST00000528201.1
ENST00000528462.5
ENST00000530513.5
ENST00000532457.5
ENST00000539589.5
CDS GCA 72 bp ATCACTTCAAGGACCCGGGTGTCCAACTCTCAATGCTaGCACCGTGACTCTGCCGCGTCCTCCCTGGGCCCC +
Preference number: 6 (lower is better)
Translates to: ITSRTRVSNSQC*HRDSAASSLGP
Trigger: GGGGCCCAGGGAGGACGCGGCAGAGTCACGGTGGCAGCATTGAGAGTTGGACACCCGGGTCCTTGAAGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000530513.5
ENST00000531226.5
ENST00000532457.5
CDS GCA 72 bp ATCACTTCAAGGACCCGGGTGTCCAACTCTCAATGCTaGCACCGTGACTCTGCCTGCCGGCCGGGGTGCCTG +
Preference number: 6 (lower is better)
Translates to: ITSRTRVSNSQC*HRDSACRPGCL
Trigger: CAGGCACCCCGGCCGGCAGGCAGAGTCACGGTGGCAGCATTGAGAGTTGGACACCCGGGTCCTTGAAGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528462.5
ENST00000539589.5
CDS GCA 72 bp GAGATCACTTCAAGGACCCGGGTGTCCAACTCTCAATaGTGCCACCGTGACTCTGCCTGCCGGCCGGGGTGC +
Preference number: 6 (lower is better)
Translates to: EITSRTRVSNSQ*CHRDSACRPGC
Trigger: GCACCCCGGCCGGCAGGCAGAGTCACGGTGGCAGCATTGAGAGTTGGACACCCGGGTCCTTGAAGTGATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528462.5
ENST00000539589.5
CDS CCA 72 bp CTAAGGCCTCCCCTCCAGCGTCCTCTTCTGGAGCCATaGTGTCCCCGCAGCACGGAATGGTGGCGGATTTGG +
Preference number: 6 (lower is better)
Translates to: LRPPLQRPLLEP*CPRSTEWWRIW
Trigger: CCAAATCCGCCACCATTCCGTGCTGCGGGGACACCATGGCTCCAGAAGAGGACGCTGGAGGGGAGGCCTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298838.11
ENST00000524509.1
ENST00000525725.5
ENST00000528462.5
ENST00000530405.5
ENST00000531226.5
ENST00000532457.5
ENST00000539589.5
CDS CCA 72 bp GGGTGCTGCGCCACCAGCGCAGATCCTCTTCGTCACTaGCTGCCTCAATGCCCTGGTGCAAGTCACGGTGGA +
Preference number: 6 (lower is better)
Translates to: GCCATSADPLRH*LPQCPGASHGG
Trigger: TCCACCGTGACTTGCACCAGGGCATTGAGGCAGCCAGTGACGAAGAGGATCTGCGCTGGTGGCGCAGCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000528462.5
ENST00000532457.5
ENST00000539589.5
CDS GCA 72 bp GAGATCACTTCAAGGACCCGGGTGTCCAACTCTCAATaGTGCCACCGTGACTCTGCCGCGTCCTCCCTGGGC +
Preference number: 6 (lower is better)
Translates to: EITSRTRVSNSQ*CHRDSAASSLG
Trigger: GCCCAGGGAGGACGCGGCAGAGTCACGGTGGCAGCATTGAGAGTTGGACACCCGGGTCCTTGAAGTGATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000530513.5
ENST00000531226.5
ENST00000532457.5
CDS GCA 72 bp GCTGCGCCACCAGCGCAGATCCTCTTCGTCACTGGCTaGCTCAATGCCCTGGTGCAAGTCACGGTGGAGTTC +
Preference number: 6 (lower is better)
Translates to: AAPPAQILFVTG*LNALVQVTVEF
Trigger: GAACTCCACCGTGACTTGCACCAGGGCATTGAGGCAGCCAGTGACGAAGAGGATCTGCGCTGGTGGCGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000528462.5
ENST00000532457.5
ENST00000539589.5
CDS GCA 72 bp GTCCAGGGCGGTGCCCGGCACCCCCAATATAGCAACTaGTGTCAGAAGCGCCGGATTCCAGGGAGGAGAATG +
Preference number: 6 (lower is better)
Translates to: VQGGARHPQYSN*CQKRRIPGRRM
Trigger: CATTCTCCTCCCTGGAATCCGGCGCTTCTGACAGCAGTTGCTATATTGGGGGTGCCGGGCACCGCCCTGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530405.5
CDS CAA 72 bp TCTTCAGTCACCGACAGAGGCTTCCAGGATTCTGATTaGTGTGTCCCCACGCGCGCGTCCTCCCTGGGCCCC +
Preference number: 6 (lower is better)
Translates to: SSVTDRGFQDSD*CVPTRASSLGP
Trigger: GGGGCCCAGGGAGGACGCGCGCGTGGGGACACACAAATCAGAATCCTGGAAGCCTCTGTCGGTGACTGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524509.1
CDS TCA 72 bp AAGGACCCGGGTGTCCAACTCTCAATGCTGCCACCGTaGCTCTGCCTTGAAGGAGAACAGAGCGGGGGTGAG +
Preference number: 6 (lower is better)
Translates to: KDPGVQLSMLPP*LCLEGEQSGGE
Trigger: CTCACCCCCGCTCTGTTCTCCTTCAAGGCAGAGTCACGGTGGCAGCATTGAGAGTTGGACACCCGGGTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530405.5
CDS CCA 72 bp TCCTTGAAGAAAAGAAGCCGCTGGCGCTCGGCGGCCTaGCAGGTCTCAAAGGCCTGTTCCATGTCCTCCATG +
Preference number: 6 (lower is better)
Translates to: SLKKRSRWRSAA*QVSKACSMSSM
Trigger: CATGGAGGACATGGAACAGGCCTTTGAGACCTGCCAGGCCGCCGAGCGCCAGCGGCTTCTTTTCTTCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298838.11
ENST00000528201.1
ENST00000528462.5
ENST00000530513.5
ENST00000532457.5
ENST00000539589.5
CDS CAA 72 bp AGGTCCAGGTGCTGGTGTAAGGTGAGCAGCATATCCTaGAAGAAAAGAAGCCGCTGGCGCTCGGCGGCCTGG +
Preference number: 6 (lower is better)
Translates to: RSRCWCKVSSIS*KKRSRWRSAAW
Trigger: CCAGGCCGCCGAGCGCCAGCGGCTTCTTTTCTTCAAGGATATGCTGCTCACCTTACACCAGCACCTGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298838.11
ENST00000528201.1
ENST00000528462.5
ENST00000530513.5
ENST00000532457.5
ENST00000539589.5
CDS CAA 90 bp CTGCTGGAAAGGTCCAGGTGCTGGTGTAAGGTGAGCAGCATATCCTaGAAGAAAAGAAGCCGCTGGCGCTCGGCGGCCTGGCAGGTCTCA +
Preference number: 6 (lower is better)
Translates to: LLERSRCWCKVSSIS*KKRSRWRSAAWQVS
Trigger: TGAGACCTGCCAGGCCGCCGAGCGCCAGCGGCTTCTTTTCTTCAAGGATATGCTGCTCACCTTACACCAGCACCTGGACCTTTCCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298838.11
ENST00000528462.5
ENST00000530513.5
ENST00000532457.5
ENST00000539589.5
CDS CCA 72 bp GGTCTCAAAGGCCTGTTCCATGTCCTCCATGTAGCGTaGAGTGTAGCGATGCAGCTCTGCCAGCGTCTGCTC +
Preference number: 6 (lower is better)
Translates to: GLKGLFHVLHVA*SVAMQLCQRLL
Trigger: GAGCAGACGCTGGCAGAGCTGCATCGCTACACTCCACGCTACATGGAGGACATGGAACAGGCCTTTGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298838.11
ENST00000528201.1
ENST00000528462.5
ENST00000530513.5
ENST00000532457.5
ENST00000539589.5
CDS CCA 72 bp AAGGTGAGCAGCATATCCTTGAAGAAAAGAAGCCGCTaGCGCTCGGCGGCCTGGCAGGTCTCAAAGGCCTGT +
Preference number: 6 (lower is better)
Translates to: KVSSISLKKRSR*RSAAWQVSKAC
Trigger: ACAGGCCTTTGAGACCTGCCAGGCCGCCGAGCGCCAGCGGCTTCTTTTCTTCAAGGATATGCTGCTCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298838.11
ENST00000528201.1
ENST00000528462.5
ENST00000530513.5
ENST00000532457.5
ENST00000539589.5
CDS GCA 72 bp ACTGCTGTCAGAAGCGCCGGATTCCAGGGAGGAGAATaGCAGGCAGGTCACACGATCCAGCCAGGGATTAAA +
Preference number: 6 (lower is better)
Translates to: TAVRSAGFQGGE*QAGHTIQPGIK
Trigger: TTTAATCCCTGGCTGGATCGTGTGACCTGCCTGGCATTCTCCTCCCTGGAATCCGGCGCTTCTGACAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530405.5
CDS GCA 72 bp ATCACTTCAAGGACCCGGGTGTCCAACTCTCAATGCTaGCACCGTGACTCTGCCTTGAAGGAGAACAGAGCG +
Preference number: 6 (lower is better)
Translates to: ITSRTRVSNSQC*HRDSALKENRA
Trigger: CGCTCTGTTCTCCTTCAAGGCAGAGTCACGGTGGCAGCATTGAGAGTTGGACACCCGGGTCCTTGAAGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530405.5
CDS CCA 72 bp TCTGCTCATACTGAGCTTTTGTCTTCTCGGCCTCCTTaGCACAGCGTTCCACCCGTTCCTGCAGTTTGCGCA +
Preference number: 6 (lower is better)
Translates to: SAHTELLSSRPP*HSVPPVPAVCA
Trigger: TGCGCAAACTGCAGGAACGGGTGGAACGCTGTGCCAAGGAGGCCGAGAAGACAAAAGCTCAGTATGAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298838.11
ENST00000528201.1
ENST00000528462.5
ENST00000530513.5
ENST00000532457.5
ENST00000539589.5
CDS TCA 72 bp CCTTCAGCCGGGGTGTATAACCCATGGAGTTGTGGCTaGCAGGACAGTGTCTATCTTCAGTCACCGACAGAG +
Preference number: 6 (lower is better)
Translates to: PSAGVYNPWSCG*QDSVYLQSPTE
Trigger: CTCTGTCGGTGACTGAAGATAGACACTGTCCTGTCAGCCACAACTCCATGGGTTATACACCCCGGCTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524509.1
CDS GCA 72 bp GTCCTCCATGTAGCGTGGAGTGTAGCGATGCAGCTCTaGCAGCGTCTGCTCATACTGAGCTTTTGTCTTCTC +
Preference number: 6 (lower is better)
Translates to: VLHVAWSVAMQL*QRLLILSFCLL
Trigger: GAGAAGACAAAAGCTCAGTATGAGCAGACGCTGGCAGAGCTGCATCGCTACACTCCACGCTACATGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298838.11
ENST00000528201.1
ENST00000528462.5
ENST00000530513.5
ENST00000532457.5
ENST00000539589.5
CDS GCA 72 bp AGATCCTCTTCGTCACTGGCTGCCTCAATGCCCTGGTaGAAGTCACGGTGGAGTTCATGGAACTTCTCACTG +
Preference number: 6 (lower is better)
Translates to: RSSSSLAASMPW*KSRWSSWNFSL
Trigger: CAGTGAGAAGTTCCATGAACTCCACCGTGACTTGCACCAGGGCATTGAGGCAGCCAGTGACGAAGAGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298838.11
ENST00000528462.5
ENST00000532457.5
ENST00000539589.5
CDS GCA 72 bp GAGATCACTTCAAGGACCCGGGTGTCCAACTCTCAATaGTGCCACCGTGACTCTGCCTTGAAGGAGAACAGA +
Preference number: 6 (lower is better)
Translates to: EITSRTRVSNSQ*CHRDSALKENR
Trigger: TCTGTTCTCCTTCAAGGCAGAGTCACGGTGGCAGCATTGAGAGTTGGACACCCGGGTCCTTGAAGTGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530405.5
CDS CCA 72 bp TCATGGAACTTCTCACTGCTGGAAAGGTCCAGGTGCTaGTGTAAGGTGAGCAGCATATCCTTGAAGAAAAGA +
Preference number: 6 (lower is better)
Translates to: SWNFSLLERSRC*CKVSSISLKKR
Trigger: TCTTTTCTTCAAGGATATGCTGCTCACCTTACACCAGCACCTGGACCTTTCCAGCAGTGAGAAGTTCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298838.11
ENST00000528462.5
ENST00000530513.5
ENST00000532457.5
ENST00000539589.5