Pregenerated sensors for PABPN1L (Homo sapiens)
Ensembl gene IDs: ENSG00000205022Ensembl transcript IDs: ENST00000411789.6, ENST00000419291.6, ENST00000547152.1
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGGGCCCATGCCAGGCTCACCACCGGGCCGTGGCTGTGACTCGTaGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACTGGG | + |
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Preference number: 1 (lower is better) Translates to: VGPMPGSPPGRGCDS*LWPWVWTTIQGPTG Trigger: CCCAGTAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACGAGTCACAGCCACGGCCCGGTGGTGAGCCTGGCATGGGCCCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| 3UTR CCA 90 bp | CCCATGCCAGGCTCACCACCGGGCCGTGGCTGTGACTCGTGGCTGTaGCCTTGGGTCTGGACCACCATACAAGGCCCTACTGGGCCATCC | + |
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Preference number: 1 (lower is better) Translates to: PMPGSPPGRGCDSWL*PWVWTTIQGPTGPS Trigger: GGATGGCCCAGTAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACGAGTCACAGCCACGGCCCGGTGGTGAGCCTGGCATGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| 3UTR-3UTR CCA 90 bp | GTGGCTGTGACTCGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACCAAGAGGGGGCCAGTaGCTGCTCTGGACACCCCTC | + |
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Preference number: 2 (lower is better) Translates to: VAVTRGCGLGSGPPYKALPRGGQ*LLWTPL Trigger: GAGGGGTGTCCAGAGCAGCCACTGGCCCCCTCTTGG...TAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACGAGTCACAGCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| 3UTR-3UTR CCA 90 bp | CTCGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACTGGGCCATCGCCCCAGCCCCAGGATaGAGCACAAGTGGTTTACTC | + |
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Preference number: 2 (lower is better) Translates to: LVAVALGLDHHTRPYWAIAPAPG*STSGLL Trigger: GAGTAAACCACTTGTGCTCCATCCTGGGGCTGGGGC...GATGGCCCAGTAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| 3UTR-3UTR CCA 90 bp | GTGGCTGTGACTCGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTAAGGATGGAGCACAAGTaGTTTACTCCTGATCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: VAVTRGCGLGSGPPYKALRMEHK*FTPDPG Trigger: GCCTGGATCAGGAGTAAACCACTTGTGCTCCATCCT...TAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACGAGTCACAGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| 3UTR CCA 72 bp | GGCCGTGGCTGTGACTCGTGGCTGTGGCCTTGGGTCTaGACCACCATACAAGGCCCTACTGGGCCATCCCCC | + |
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Preference number: 3 (lower is better) Translates to: GRGCDSWLWPWV*TTIQGPTGPSP Trigger: GGGGGATGGCCCAGTAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACGAGTCACAGCCACGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR GCA 90 bp | CCAGTGGCTGCTCTGGACACCCCTCTCCTCTGGCCTCGCCCCCGCGCCACTCCCTCAGGGCTCAGCAGCTaGCCGGCCGCGGTGCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PVAALDTPLLWPRPRATPSGLSS*PAAVPS Trigger: GGAGGGCACCGCGGCCGGGCAGCTGCTGAGCCCTGA...GGGAGTGGCGCGGGGGCGAGGCCAGAGGAGAGGGGTGTCCAGAGCAGCCACTGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR GCA 90 bp | CCAAGAGGGGGCCAGTGGCTGCTCTGGACACCCCTCTCCTCTGGCCTCGCCCCCGCTGCCCGGCCGCGGTaGCCTCCTCTTCCTCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PRGGQWLLWTPLSSGLAPAARPR*PPLPRP Trigger: AGGCCGAGGAAGAGGAGGGCACCGCGGCCGGGCAGC...GGGGGCGAGGCCAGAGGAGAGGGGTGTCCAGAGCAGCCACTGGCCCCCTCTTGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR CCA 90 bp | CCAGTGGCTGCTCTGGACACCCCTCTCCTCTGGCCTCGCCCCCGCGCCACTCCCGACACCCCTCTCCTCTaGCCTCGCCCCCGCGCCACT | + |
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Preference number: 4 (lower is better) Translates to: PVAALDTPLLWPRPRATPDTPLL*PRPRAT Trigger: AGTGGCGCGGGGGCGAGGCCAGAGGAGAGGGGTGTC...GGGAGTGGCGCGGGGGCGAGGCCAGAGGAGAGGGGTGTCCAGAGCAGCCACTGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR CCA 90 bp | CCAGTGGCTGCTCTGGACACCCCTCTCCTCTGGCCTCGCCCCCGCGCCACTCCCCCGGTTCTGCCCTTGTaGTCTGAGCCGGGGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: PVAALDTPLLWPRPRATPPVLPL*SEPGPA Trigger: GGCAGGCCCCGGCTCAGACCACAAGGGCAGAACCGG...GGGAGTGGCGCGGGGGCGAGGCCAGAGGAGAGGGGTGTCCAGAGCAGCCACTGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR TCA 90 bp | CCAAGAGGGGGCCAGTGGCTGCTCTGGACACCCCTCTCCTCTGGCCTCGCCCCCTCTGCCCTTGTGGTCTaGGCCGGGGCCTGCCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PRGGQWLLWTPLSSGLAPSALVV*AGACPG Trigger: TCCAGGGCAGGCCCCGGCTCAGACCACAAGGGCAGA...GGGGGCGAGGCCAGAGGAGAGGGGTGTCCAGAGCAGCCACTGGCCCCCTCTTGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR GCA 90 bp | CCAAGAGGGGGCCAGTGGCTGCTCTGGACACCCCTCTCCTCTGGCCTCGCCCCCAGCTCCACGGCGGCCTaGACGGAGCCCTTGGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: PRGGQWLLWTPLSSGLAPSSTAA*TEPLVA Trigger: TGCCACCAAGGGCTCCGTGCAGGCCGCCGTGGAGCT...GGGGGCGAGGCCAGAGGAGAGGGGTGTCCAGAGCAGCCACTGGCCCCCTCTTGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR CCA 90 bp | CCAAGAGGGGGCCAGTGGCTGCTCTGGACACCCCTCTCCTCTGGCCTCGCCCCCGGCCTGAGTCGGGGGTaGGAAGAGAGAGCGGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: PRGGQWLLWTPLSSGLAPGLSRG*EERAAR Trigger: CCGAGCCGCTCTCTCTTCCCACCCCCGACTCAGGCC...GGGGGCGAGGCCAGAGGAGAGGGGTGTCCAGAGCAGCCACTGGCCCCCTCTTGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR CCA 90 bp | CCAGTGGCTGCTCTGGACACCCCTCTCCTCTGGCCTCGCCCCCGCGCCACTCCCCCAAGAGGGGGCCAGTaGCTGCTCTGGACACCCCTC | + |
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Preference number: 4 (lower is better) Translates to: PVAALDTPLLWPRPRATPPRGGQ*LLWTPL Trigger: GAGGGGTGTCCAGAGCAGCCACTGGCCCCCTCTTGG...GGGAGTGGCGCGGGGGCGAGGCCAGAGGAGAGGGGTGTCCAGAGCAGCCACTGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR TCA 90 bp | CCAAGAGGGGGCCAGTGGCTGCTCTGGACACCCCTCTCCTCTGGCCTCGCCCCCCTGGGCCTCAGGGTCTaGGGAGACCGTCTGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: PRGGQWLLWTPLSSGLAPLGLRV*GDRLEP Trigger: TGGCTCCAGACGGTCTCCTCAGACCCTGAGGCCCAG...GGGGGCGAGGCCAGAGGAGAGGGGTGTCCAGAGCAGCCACTGGCCCCCTCTTGG 70% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR TCA 90 bp | CCAGTGGCTGCTCTGGACACCCCTCTCCTCTGGCCTCGCCCCCGCGCCACTCCCTGTCACACAGGATCGTaGCTCGGTGGACCTCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: PVAALDTPLLWPRPRATPCHTGS*LGGPPH Trigger: GTGGGGAGGTCCACCGAGTCACGATCCTGTGTGACA...GGGAGTGGCGCGGGGGCGAGGCCAGAGGAGAGGGGTGTCCAGAGCAGCCACTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR GCA 90 bp | CCAAGAGGGGGCCAGTGGCTGCTCTGGACACCCCTCTCCTCTGGCCTCGCCCCCAAGCTGGCCTGGCACTaGCTGGGACTCTGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PRGGQWLLWTPLSSGLAPKLAWH*LGLCSS Trigger: GGAGGAGCAGAGTCCCAGGCAGTGCCAGGCCAGCTT...GGGGGCGAGGCCAGAGGAGAGGGGTGTCCAGAGCAGCCACTGGCCCCCTCTTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR CCA 90 bp | CCAAGAGGGGGCCAGTGGCTGCTCTGGACACCCCTCTCCTCTGGCCTCGCCCCCCGTGGCTGTGACTCGTaGCTGTGGCCTTGGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PRGGQWLLWTPLSSGLAPRGCDS*LWPWVW Trigger: CCAGACCCAAGGCCACAGCCACGAGTCACAGCCACG...GGGGGCGAGGCCAGAGGAGAGGGGTGTCCAGAGCAGCCACTGGCCCCCTCTTGG 69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR CCA 90 bp | CGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACTGGGCCATCCCCCACAGCGGCTGAAGTaGGCCTCCAGCTCCTCGGCG | + |
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Preference number: 4 (lower is better) Translates to: RGCGLGSGPPYKALLGHPPQRLK*ASSSSA Trigger: CGCCGAGGAGCTGGAGGCCCACTTCAGCCGCTGTGG...GGGATGGCCCAGTAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR TCA 90 bp | CCAAGAGGGGGCCAGTGGCTGCTCTGGACACCCCTCTCCTCTGGCCTCGCCCCCCACACACCTTCATCTTaGTGGCCTCCAGCTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: PRGGQWLLWTPLSSGLAPHTPSS*WPPAPG Trigger: ACCAGGAGCTGGAGGCCATCAAGATGAAGGTGTGTG...GGGGGCGAGGCCAGAGGAGAGGGGTGTCCAGAGCAGCCACTGGCCCCCTCTTGG 66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR GCA 90 bp | CGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACTGGGCCATCCCGAGGGGGCCAGTGGCTaGTCTGGACACCCCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RGCGLGSGPPYKALLGHPEGASG*SGHPSP Trigger: AGGAGAGGGGTGTCCAGAGCAGCCACTGGCCCCCTC...GGGATGGCCCAGTAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR CCA 90 bp | CCAAGAGGGGGCCAGTGGCTGCTCTGGACACCCCTCTCCTCTGGCCTCGCCCCCCCTGCATCCCCATCCTaGTCTTCCTCTGCATCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PRGGQWLLWTPLSSGLAPPASPS*SSSASS Trigger: AGAGGATGCAGAGGAAGACCAGGATGGGGATGCAGG...GGGGGCGAGGCCAGAGGAGAGGGGTGTCCAGAGCAGCCACTGGCCCCCTCTTGG 66% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR TCA 90 bp | GTGGCTGTGACTCGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACCTCCCCACAGCGGCTaGAGTGGGCCTCCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: VAVTRGCGLGSGPPYKALPPHSG*SGPPAP Trigger: AGGAGCTGGAGGCCCACTTCAGCCGCTGTGGGGAGG...TAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACGAGTCACAGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR GCA 90 bp | CTCGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACTGGGCCATCGGCGTCCCCTCGGCCTaGTCCATGGCACACACCTTC | + |
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Preference number: 4 (lower is better) Translates to: LVAVALGLDHHTRPYWAIGVPSA*SMAHTF Trigger: GAAGGTGTGTGCCATGGAGCAGGCCGAGGGGACGCC...GATGGCCCAGTAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR GCA 90 bp | CTCGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACTGGGCCATCTCCTCGGCCTGTTGCTaGACTCCTGGAGGCCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LVAVALGLDHHTRPYWAISSACC*TPGGRG Trigger: GCCACGGCCTCCAGGAGTGCAGCAACAGGCCGAGGA...GATGGCCCAGTAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR GCA 90 bp | GTGGCTGTGACTCGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACCACGGGCCCGGTTCTaGCCTTGTGGTCTGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: VAVTRGCGLGSGPPYKALPRARF*PCGLSR Trigger: CCGGCTCAGACCACAAGGGCAGAACCGGGCCCGTGG...TAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACGAGTCACAGCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR GCA 90 bp | GGATGGAGCACAAGTGGTTTACTCCTGATCCAGGCCCCAGCCCCTCTCTCAAAATCCCCGTGGGGCCCATaGCAGGCTCACCACCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GWSTSGLLLIQAPAPLSKSPWGP*QAHHRA Trigger: GGCCCGGTGGTGAGCCTGGCATGGGCCCCACGGGGA...TTTTGAGAGAGGGGCTGGGGCCTGGATCAGGAGTAAACCACTTGTGCTCCATCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR CCA 90 bp | GTGGCTGTGACTCGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACTGTTGCTGCACTCCTaGAGGCCGTGGCGTCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: VAVTRGCGLGSGPPYKALLLLHS*RPWRPL Trigger: GAGGGGACGCCACGGCCTCCAGGAGTGCAGCAACAG...TAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACGAGTCACAGCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR GCA 90 bp | CGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACTGGGCCATCCCCCCCGTAGTCCACGTTaGCCACGTAGACGGATCTGT | + |
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Preference number: 4 (lower is better) Translates to: RGCGLGSGPPYKALLGHPPRSPR*PRRRIC Trigger: ACAGATCCGTCTACGTGGGCAACGTGGACTACGGGG...GGGATGGCCCAGTAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACG 62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR CCA 90 bp | CGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACTGGGCCATCCCCTCCTGGTCAGGCAATaGGCACTCAGCCAGGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: RGCGLGSGPPYKALLGHPLLVRQ*ALSQVL Trigger: GAGAACCTGGCTGAGTGCCCATTGCCTGACCAGGAG...GGGATGGCCCAGTAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR CCA 90 bp | CGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACTGGGCCATCCCATGGCCTCCAGCTCCTaGTCAGGCAATGGGCACTCA | + |
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Preference number: 4 (lower is better) Translates to: RGCGLGSGPPYKALLGHPMASSS*SGNGHS Trigger: TGAGTGCCCATTGCCTGACCAGGAGCTGGAGGCCAT...GGGATGGCCCAGTAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR CCA 90 bp | GGATGGAGCACAAGTGGTTTACTCCTGATCCAGGCCCCAGCCCCTCTCTCAAAACACTCCTGGAGGCCGTaGCGTCCCCTCGGCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: GWSTSGLLLIQAPAPLSKHSWRP*RPLGLL Trigger: GAGCAGGCCGAGGGGACGCCACGGCCTCCAGGAGTG...TTTTGAGAGAGGGGCTGGGGCCTGGATCAGGAGTAAACCACTTGTGCTCCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR CCA 90 bp | GGATGGAGCACAAGTGGTTTACTCCTGATCCAGGCCCCAGCCCCTCTCTCAAAACCCCGGAAGAGGCTCTaGTCCAGCTCCACGGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: GWSTSGLLLIQAPAPLSKPRKRL*SSSTAA Trigger: GGCCGCCGTGGAGCTGGACCAGAGCCTCTTCCGGGG...TTTTGAGAGAGGGGCTGGGGCCTGGATCAGGAGTAAACCACTTGTGCTCCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR CCA 90 bp | GTGGCTGTGACTCGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTAAACCCCAAGCTGGCCTaGCACTGCCTGGGACTCTGC | + |
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Preference number: 4 (lower is better) Translates to: VAVTRGCGLGSGPPYKALNPKLA*HCLGLC Trigger: GCAGAGTCCCAGGCAGTGCCAGGCCAGCTTGGGGTT...TAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACGAGTCACAGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR TCA 90 bp | GTGGCTGTGACTCGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACGCGGTCTGTGGAGCTaGTCCCAGGGAAGTTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: VAVTRGCGLGSGPPYKALRGLWS*SQGSWF Trigger: GAACCAACTTCCCTGGGATCAGCTCCACAGACCGCG...TAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACGAGTCACAGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR TCA 90 bp | GTGGCTGTGACTCGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACAAGTGGTTTACTCCTaGTCCAGGCCCCAGCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: VAVTRGCGLGSGPPYKALQVVYS*SRPQPL Trigger: GAGGGGCTGGGGCCTGGATCAGGAGTAAACCACTTG...TAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACGAGTCACAGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR CCA 90 bp | GGATGGAGCACAAGTGGTTTACTCCTGATCCAGGCCCCAGCCCCTCTCTCAAAAAGGATCGTGACTCGGTaGACCTCCCCACAGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GWSTSGLLLIQAPAPLSKRIVTR*TSPQRL Trigger: CAGCCGCTGTGGGGAGGTCCACCGAGTCACGATCCT...TTTTGAGAGAGGGGCTGGGGCCTGGATCAGGAGTAAACCACTTGTGCTCCATCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR CCA 90 bp | CGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACTGGGCCATCCCAGGATGGAGCACAAGTaGTTTACTCCTGATCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RGCGLGSGPPYKALLGHPRMEHK*FTPDPG Trigger: GCCTGGATCAGGAGTAAACCACTTGTGCTCCATCCT...GGGATGGCCCAGTAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR CCA 90 bp | CTCGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACTGGGCCATCGCACGGAGCCCTTGGTaGCAAACTCTATGTAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: LVAVALGLDHHTRPYWAIARSPW*QTLCRH Trigger: ATGCCTACATAGAGTTTGCCACCAAGGGCTCCGTGC...GATGGCCCAGTAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR CCA 90 bp | GTGGCTGTGACTCGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACCTGCACGGAGCCCTTaGTGGCAAACTCTATGTAGG | + |
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Preference number: 4 (lower is better) Translates to: VAVTRGCGLGSGPPYKALPARSP*WQTLCR Trigger: CCTACATAGAGTTTGCCACCAAGGGCTCCGTGCAGG...TAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACGAGTCACAGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR GCA 90 bp | GTGGCTGTGACTCGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTAAGACAGCAGAAAGCCTaGATCCCCATCCTGGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: VAVTRGCGLGSGPPYKALRQQKA*IPILVF Trigger: GAAGACCAGGATGGGGATGCAGGCTTTCTGCTGTCT...TAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACGAGTCACAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR CCA 90 bp | CTCGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACTGGGCCATCTGTAGGCATAACCCTTaGGGTGTCCAGAGAACTTGT | + |
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Preference number: 4 (lower is better) Translates to: LVAVALGLDHHTRPYWAICRHNP*GVQRTC Trigger: ACAAGTTCTCTGGACACCCCAAGGGTTATGCCTACA...GATGGCCCAGTAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR CAA 90 bp | CCAGTGGCTGCTCTGGACACCCCTCTCCTCTGGCCTCGCCCCCGCGCCACTCCCGGCCCGGTTCTGCCCTaGTGGTCTGAGCCGGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: PVAALDTPLLWPRPRATPGPVLP*WSEPGP Trigger: AGGCCCCGGCTCAGACCACAAGGGCAGAACCGGGCC...GGGAGTGGCGCGGGGGCGAGGCCAGAGGAGAGGGGTGTCCAGAGCAGCCACTGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS CCA 90 bp | CCCGGCCGCGGTGCCCTCCTCTTCCTCGGCCTGTTGCTGCACTCCTaGAGGCCGTGGCGTCCCCTCGGCCTGCTCCATGGCACACACCTT | + |
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Preference number: 5 (lower is better) Translates to: PGRGALLFLGLLLHS*RPWRPLGLLHGTHL Trigger: AAGGTGTGTGCCATGGAGCAGGCCGAGGGGACGCCACGGCCTCCAGGAGTGCAGCAACAGGCCGAGGAAGAGGAGGGCACCGCGGCCGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000411789.6 ENST00000419291.6 ENST00000547152.1 |
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| CDS-3UTR CAA 90 bp | CCAGTGGCTGCTCTGGACACCCCTCTCCTCTGGCCTCGCCCCCGCGCCACTCCCGGCCCCAGAATCTCCTaGGTCTCGTTCCAGGCCCCC | + |
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Preference number: 5 (lower is better) Translates to: PVAALDTPLLWPRPRATPGPRIS*VSFQAP Trigger: GGGGGCCTGGAACGAGACCAAGGAGATTCTGGGGCC...GGGAGTGGCGCGGGGGCGAGGCCAGAGGAGAGGGGTGTCCAGAGCAGCCACTGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS GCA 90 bp | TCGGCCTGTTGCTGCACTCCTGGAGGCCGTGGCGTCCCCTCGGCCTaGTCCATGGCACACACCTTCATCTTGATGGCCTCCAGCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SACCCTPGGRGVPSA*SMAHTFILMASSSW Trigger: CCAGGAGCTGGAGGCCATCAAGATGAAGGTGTGTGCCATGGAGCAGGCCGAGGGGACGCCACGGCCTCCAGGAGTGCAGCAACAGGCCGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000411789.6 ENST00000419291.6 ENST00000547152.1 |
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| CDS CCA 90 bp | GGTGCCCTCCTCTTCCTCGGCCTGTTGCTGCACTCCTGGAGGCCGTaGCGTCCCCTCGGCCTGCTCCATGGCACACACCTTCATCTTGAT | + |
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Preference number: 5 (lower is better) Translates to: GALLFLGLLLHSWRP*RPLGLLHGTHLHLD Trigger: ATCAAGATGAAGGTGTGTGCCATGGAGCAGGCCGAGGGGACGCCACGGCCTCCAGGAGTGCAGCAACAGGCCGAGGAAGAGGAGGGCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000411789.6 ENST00000419291.6 ENST00000547152.1 |
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| CDS-3UTR CAA 90 bp | CGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACTGGGCCATCCCGCACACACCTTCATCTaGATGGCCTCCAGCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: RGCGLGSGPPYKALLGHPAHTFI*MASSSW Trigger: CCAGGAGCTGGAGGCCATCAAGATGAAGGTGTGTGC...GGGATGGCCCAGTAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS GCA 90 bp | GCCTCCAGCTCCTGGTCAGGCAATGGGCACTCAGCCAGGTTCTCTTaGTCCAGCAGAGACAGCAGAAAGCCTGCATCCCCATCCTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: ASSSWSGNGHSARFS*SSRDSRKPASPSWS Trigger: AGACCAGGATGGGGATGCAGGCTTTCTGCTGTCTCTGCTGGAGCAAGAGAACCTGGCTGAGTGCCCATTGCCTGACCAGGAGCTGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000411789.6 ENST00000419291.6 ENST00000547152.1 |
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| CDS-3UTR CAA 90 bp | CTCGTGGCTGTGGCCTTGGGTCTGGACCACCATACAAGGCCCTACTGGGCCATCCTGATCCCAGGGAAGTaGGTTCTTTTCGGCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: LVAVALGLDHHTRPYWAILIPGK*VLFGST Trigger: GGTGCTGCCGAAAAGAACCAACTTCCCTGGGATCAG...GATGGCCCAGTAGGGCCTTGTATGGTGGTCCAGACCCAAGGCCACAGCCACGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS-3UTR CAA 90 bp | GGATGGAGCACAAGTGGTTTACTCCTGATCCAGGCCCCAGCCCCTCTCTCAAAACTTTTCGGCAGCACCTaGATGACCCGGCCCCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: GWSTSGLLLIQAPAPLSKLFGST*MTRPRK Trigger: CTTCCGGGGCCGGGTCATCAAGGTGCTGCCGAAAAG...TTTTGAGAGAGGGGCTGGGGCCTGGATCAGGAGTAAACCACTTGTGCTCCATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000419291.6 |
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| CDS GCA 90 bp | CAGCAGAGACAGCAGAAAGCCTGCATCCCCATCCTGGTCTTCCTCTaGATCCTCTTCCTCCTCTTTCTCCTCCTTCCCTTCCCCACCCTC | + |
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Preference number: 5 (lower is better) Translates to: QQRQQKACIPILVFL*ILFLLFLLLPFPTL Trigger: GAGGGTGGGGAAGGGAAGGAGGAGAAAGAGGAGGAAGAGGATGCAGAGGAAGACCAGGATGGGGATGCAGGCTTTCTGCTGTCTCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000411789.6 ENST00000419291.6 ENST00000547152.1 |
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| CDS CCA 90 bp | TTCTCTTGCTCCAGCAGAGACAGCAGAAAGCCTGCATCCCCATCCTaGTCTTCCTCTGCATCCTCTTCCTCCTCTTTCTCCTCCTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: FSCSSRDSRKPASPS*SSSASSSSSFSSFP Trigger: AGGGAAGGAGGAGAAAGAGGAGGAAGAGGATGCAGAGGAAGACCAGGATGGGGATGCAGGCTTTCTGCTGTCTCTGCTGGAGCAAGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000411789.6 ENST00000419291.6 ENST00000547152.1 |
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| CDS GCA 72 bp | CCGGCCGCGGTGCCCTCCTCTTCCTCGGCCTGTTGCTaGACTCCTGGAGGCCGTGGCGTCCCCTCGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PAAVPSSSSACC*TPGGRGVPSAC Trigger: GCAGGCCGAGGGGACGCCACGGCCTCCAGGAGTGCAGCAACAGGCCGAGGAAGAGGAGGGCACCGCGGCCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000411789.6 ENST00000419291.6 ENST00000547152.1 |
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| CDS GCA 72 bp | TGCCCGGCCGCGGTGCCCTCCTCTTCCTCGGCCTGTTaGTGCACTCCTGGAGGCCGTGGCGTCCCCTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: CPAAVPSSSSAC*CTPGGRGVPSA Trigger: GGCCGAGGGGACGCCACGGCCTCCAGGAGTGCAGCAACAGGCCGAGGAAGAGGAGGGCACCGCGGCCGGGCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000411789.6 ENST00000419291.6 ENST00000547152.1 |
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| CDS GCA 72 bp | CCACGGTCTCAGGGCTCAGCAGCTGCCCGGCCGCGGTaGCCTCCTCTTCCTCGGCCTGTTGCTGCACTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PRSQGSAAARPR*PPLPRPVAALL Trigger: CAGGAGTGCAGCAACAGGCCGAGGAAGAGGAGGGCACCGCGGCCGGGCAGCTGCTGAGCCCTGAGACCGTGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000411789.6 ENST00000419291.6 ENST00000547152.1 |
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| CDS CCA 72 bp | GGTGCCCTCCTCTTCCTCGGCCTGTTGCTGCACTCCTaGAGGCCGTGGCGTCCCCTCGGCCTGCTCCATGGC | + |
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Preference number: 6 (lower is better) Translates to: GALLFLGLLLHS*RPWRPLGLLHG Trigger: GCCATGGAGCAGGCCGAGGGGACGCCACGGCCTCCAGGAGTGCAGCAACAGGCCGAGGAAGAGGAGGGCACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000411789.6 ENST00000419291.6 ENST00000547152.1 |
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| CDS CCA 72 bp | CTCTTCCTCGGCCTGTTGCTGCACTCCTGGAGGCCGTaGCGTCCCCTCGGCCTGCTCCATGGCACACACCTT | + |
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Preference number: 6 (lower is better) Translates to: LFLGLLLHSWRP*RPLGLLHGTHL Trigger: AAGGTGTGTGCCATGGAGCAGGCCGAGGGGACGCCACGGCCTCCAGGAGTGCAGCAACAGGCCGAGGAAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000411789.6 ENST00000419291.6 ENST00000547152.1 |
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| CDS GCA 72 bp | TGCTGCACTCCTGGAGGCCGTGGCGTCCCCTCGGCCTaGTCCATGGCACACACCTTCATCTTGATGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: CCTPGGRGVPSA*SMAHTFILMAS Trigger: GGAGGCCATCAAGATGAAGGTGTGTGCCATGGAGCAGGCCGAGGGGACGCCACGGCCTCCAGGAGTGCAGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000411789.6 ENST00000419291.6 ENST00000547152.1 |
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| CDS TCA 72 bp | CTGGGTGTCCTCGAAGGCCCCCGCGGTCTGTGGAGCTaGTCCCAGGGAAGTTGGTTCTTTTCGGCAGCACCC | + |
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Preference number: 6 (lower is better) Translates to: LGVLEGPRGLWS*SQGSWFFSAAP Trigger: GGGTGCTGCCGAAAAGAACCAACTTCCCTGGGATCAGCTCCACAGACCGCGGGGGCCTTCGAGGACACCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000411789.6 |
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| CDS CAA 72 bp | AGGCCCCCGCGGTCTGTGGAGCTGATCCCAGGGAAGTaGGTTCTTTTCGGCAGCACCTTGATGACCCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: RPPRSVELIPGK*VLFGSTLMTRP Trigger: GGGCCGGGTCATCAAGGTGCTGCCGAAAAGAACCAACTTCCCTGGGATCAGCTCCACAGACCGCGGGGGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000419291.6 ENST00000547152.1 |
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| CDS TCA 72 bp | CTGGGTGTCCTCGAAGGCCCCCGCGGTCTGTGGAGCTaGTCCCAGGGAAGTTGGTTCTTTTCGGCAGCACCT | + |
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Preference number: 6 (lower is better) Translates to: LGVLEGPRGLWS*SQGSWFFSAAP Trigger: AGGTGCTGCCGAAAAGAACCAACTTCCCTGGGATCAGCTCCACAGACCGCGGGGGCCTTCGAGGACACCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000419291.6 ENST00000547152.1 |
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| CDS GCA 72 bp | CAGCAGAAAGCCTGCATCCCCATCCTGGTCTTCCTCTaGATCCTCTTCCTCCTCTTTCTCCTCCTTCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: QQKACIPILVFL*ILFLLFLLLPF Trigger: GAAGGGAAGGAGGAGAAAGAGGAGGAAGAGGATGCAGAGGAAGACCAGGATGGGGATGCAGGCTTTCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000411789.6 ENST00000419291.6 ENST00000547152.1 |
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