Pregenerated sensors for PABPC5 (Homo sapiens)
Ensembl gene IDs: ENSG00000174740Ensembl transcript IDs: ENST00000312600.4, ENST00000373105.1
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAACCATATTGGTTTCACAGTTCTCATATAATGGCTGGAGGCATATaGCTTAATCCAAGAGACAACCTATTCCTTACCTTTGAAACACCT | + |
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Preference number: 1 (lower is better) Translates to: KPYWFHSSHIMAGGI*LNPRDNLFLTFETP Trigger: AGGTGTTTCAAAGGTAAGGAATAGGTTGTCTCTTGGATTAAGTCATATGCCTCCAGCCATTATATGAGAACTGTGAAACCAATATGGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| 3UTR TCA 90 bp | AATATGAATGGAAGGCAGGCAATGAGGAGAACAGGAAACTGCAAGTaGAATGTAGAGAATCTCCAATTTAGAAATTACAGGCTAATAAAT | + |
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Preference number: 1 (lower is better) Translates to: NMNGRQAMRRTGNCK*NVENLQFRNYRLIN Trigger: ATTTATTAGCCTGTAATTTCTAAATTGGAGATTCTCTACATTTCACTTGCAGTTTCCTGTTCTCCTCATTGCCTGCCTTCCATTCATATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| 3UTR-3UTR GCA 90 bp | TTGGGCAAGAAGTTAATACGACCACTCCCAACATTTAGTCAAAAGTACTATCAAACATATGTTTTCCCCTaGTGTACTGACTTCTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: LGKKLIRPLPTFSQKYYQTYVFP*CTDFSK Trigger: TTTTGAGAAGTCAGTACAGCAGGGGAAAACATATGT...TTGATAGTACTTTTGACTAAATGTTGGGAGTGGTCGTATTAACTTCTTGCCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| 3UTR TCA 72 bp | GGAAGGCAGGCAATGAGGAGAACAGGAAACTGCAAGTaGAATGTAGAGAATCTCCAATTTAGAAATTACAGG | + |
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Preference number: 3 (lower is better) Translates to: GRQAMRRTGNCK*NVENLQFRNYR Trigger: CCTGTAATTTCTAAATTGGAGATTCTCTACATTTCACTTGCAGTTTCCTGTTCTCCTCATTGCCTGCCTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| 3UTR TCA 72 bp | TGGTTTCACAGTTCTCATATAATGGCTGGAGGCATATaGCTTAATCCAAGAGACAACCTATTCCTTACCTTT | + |
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Preference number: 3 (lower is better) Translates to: WFHSSHIMAGGI*LNPRDNLFLTF Trigger: AAAGGTAAGGAATAGGTTGTCTCTTGGATTAAGTCATATGCCTCCAGCCATTATATGAGAACTGTGAAACCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| 3UTR-3UTR CAA 90 bp | AAGGAATTTAGAAAAATGAATGGTAGGAGTGGTACTGAAAGTATCCTCACATACAATATACTCAATCAATaGCCTCACCTTGACTGTTCA | + |
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Preference number: 3 (lower is better) Translates to: KEFRKMNGRSGTESILTYNILNQ*PHLDCS Trigger: TGAACAGTCAAGGTGAGGCAATTGATTGAGTATATT...GTATGTGAGGATACTTTCAGTACCACTCCTACCATTCATTTTTCTAAATTCCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| CDS-3UTR CCA 90 bp | ACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTGAGCATGACGCGAGGCGGGTCTaGCCAGATGCGGGGCGGAGT | + |
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Preference number: 4 (lower is better) Translates to: TKEPKLRRHQLRLKQTEHDARRV*PDAGRS Trigger: ACTCCGCCCCGCATCTGGCCAGACCCGCCTCGCGTC...ATGCTCAGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373105.1 |
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| CDS-3UTR GCA 90 bp | CTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTGCGAAGAAGGGCAGATaGGCGGCGGGCGGTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LITKEPKLRRHQLRLKQTAKKGR*AAGGPS Trigger: GCTGGGACCGCCCGCCGCGCATCTGCCCTTCTTCGC...AGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373105.1 |
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| CDS-3UTR CCA 90 bp | ATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAACACCTGCGCCTGGCCTaGCCCAGGGTGACATGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ITPYHKGAQTKEAPTKAEHLRLA*PRVTCR Trigger: CCTGCATGTCACCCTGGGCCAGGCCAGGCGCAGGTG...TTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR CCA 90 bp | CTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTCACCTGCGCCTGGCCTaGCCCAGGGTGACATGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LITKEPKLRRHQLRLKQTHLRLA*PRVTCR Trigger: CCTGCATGTCACCCTGGGCCAGGCCAGGCGCAGGTG...AGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR CCA 90 bp | ACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTGAGCATCCCAGCGCAGACCGATaGGCTGGGGTTTCTCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: TKEPKLRRHQLRLKQTEHPSADR*AGVSLR Trigger: GCGGAGAGAAACCCCAGCCCATCGGTCTGCGCTGGG...ATGCTCAGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373105.1 |
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| CDS-3UTR TCA 90 bp | ACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTGAGCATGTGATTTCAGCAGCCTaGGGCTCGAGGCAGGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: TKEPKLRRHQLRLKQTEHVISAA*GSRQVR Trigger: CCGGACCTGCCTCGAGCCTCAGGCTGCTGAAATCAC...ATGCTCAGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR GCA 90 bp | CATAAAATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCGGGTCTGGCCAGATaGGGGGCGGAGTCAGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: HKITPYHKGAQTKEAPTKAGLAR*GAESAK Trigger: CTTCGCTGACTCCGCCCCGCATCTGGCCAGACCCGC...CTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTATTTTATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373105.1 |
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| CDS-3UTR CCA 90 bp | ATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAACGCAGACCGATGGGCTaGGGTTTCTCTCCGCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: ITPYHKGAQTKEAPTKAERRPMG*GFSPQD Trigger: GTCCTGCGGAGAGAAACCCCAGCCCATCGGTCTGCG...TTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373105.1 |
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| CDS-3UTR TCA 90 bp | CTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTGTGATTTCAGCAGCCTaGGGCTCGAGGCAGGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: LITKEPKLRRHQLRLKQTVISAA*GSRQVR Trigger: CCGGACCTGCCTCGAGCCTCAGGCTGCTGAAATCAC...AGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR TCA 90 bp | CTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTCACGGCAGATTCGGGTaGATCGCAGAGGGCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LITKEPKLRRHQLRLKQTHGRFG*IAEGQQ Trigger: CTGCTGGCCCTCTGCGATTCACCCGAATCTGCCGTG...AGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| CDS-3UTR TCA 90 bp | ATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAACTCTATCCCTGGTTCTaGCCTCAGCCGCCCGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: ITPYHKGAQTKEAPTKAELYPWF*PQPPAL Trigger: AAGAGCGGGCGGCTGAGGTCAGAACCAGGGATAGAG...TTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR TCA 90 bp | CATAAAATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGCAGCGGCCAGGCGAGTaGGGCGCGGTGATTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: HKITPYHKGAQTKEAPTKQRPGE*GAVISA Trigger: TGCTGAAATCACCGCGCCTCACTCGCCTGGCCGCTG...CTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTATTTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373105.1 |
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| CDS-3UTR CCA 90 bp | ATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAACAAACGCGCAGTGAGTaGGTCAGCTCTGACGCGAGG | + |
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Preference number: 4 (lower is better) Translates to: ITPYHKGAQTKEAPTKAEQTRSE*VSSDAR Trigger: CCTCGCGTCAGAGCTGACCCACTCACTGCGCGTTTG...TTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373105.1 |
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| CDS-3UTR TCA 90 bp | CATAAAATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCGAGTGAGGCGCGGTaGTTTCAGCAGCCTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: HKITPYHKGAQTKEAPTKASEAR*FQQPEA Trigger: AGCCTCAGGCTGCTGAAATCACCGCGCCTCACTCGC...CTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTATTTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR CCA 90 bp | ATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAGCCAGATGGCTCTATTaGCAGCGGCCAGGCTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: ITPYHKGAQTKEAPTKAEARWLY*QRPGCQ Trigger: TTGACAGCCTGGCCGCTGCCAATAGAGCCATCTGGC...TTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| CDS-3UTR TCA 90 bp | CATAAAATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGCTCTATCCCTGGTTCTaGCCTCAGCCGCCCGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: HKITPYHKGAQTKEAPTKLYPWF*PQPPAL Trigger: AAGAGCGGGCGGCTGAGGTCAGAACCAGGGATAGAG...CTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTATTTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR GCA 90 bp | CTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTGTTCAAGGCCCACTCTaGATCCGCGGGAAAGCGGAA | + |
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Preference number: 4 (lower is better) Translates to: LITKEPKLRRHQLRLKQTVQGPL*IRGKAE Trigger: TTCCGCTTTCCCGCGGATGCAGAGTGGGCCTTGAAC...AGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| CDS-3UTR CCA 90 bp | ACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTGAGCATCTGCCAACATACACCTaGCGGTTGTTGAGCCGCACT | + |
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Preference number: 4 (lower is better) Translates to: TKEPKLRRHQLRLKQTEHLPTYT*RLLSRT Trigger: AGTGCGGCTCAACAACCGCCAGGTGTATGTTGGCAG...ATGCTCAGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR TCA 90 bp | ATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAGAGGGCCAGCAGGCCTaGACTTCTTATAGAGCATGT | + |
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Preference number: 4 (lower is better) Translates to: ITPYHKGAQTKEAPTKAEEGQQA*TSYRAC Trigger: ACATGCTCTATAAGAAGTTCAGGCCTGCTGGCCCTC...TTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| CDS-3UTR TCA 90 bp | ATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAAAGCGGTCATCTGGCTaGGACCACATAAGGCGGAAT | + |
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Preference number: 4 (lower is better) Translates to: ITPYHKGAQTKEAPTKAEKRSSG*DHIRRN Trigger: ATTCCGCCTTATGTGGTCTCAGCCAGATGACCGCTT...TTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| CDS-3UTR TCA 90 bp | CTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTACACCTGGCGGTTGTTaGGCCGCACTCCATTCATGT | + |
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Preference number: 4 (lower is better) Translates to: LITKEPKLRRHQLRLKQTTPGGC*AALHSC Trigger: ACATGAATGGAGTGCGGCTCAACAACCGCCAGGTGT...AGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR GCA 90 bp | AAGGAATTTAGAAAAATGAATGGTAGGAGTGGTACTGAAAGTATCCTCACATACCATAGCCCAGGGGGCTaGGGGTCACCGGATCACGGC | + |
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Preference number: 4 (lower is better) Translates to: KEFRKMNGRSGTESILTYHSPGG*GSPDHG Trigger: GCCGTGATCCGGTGACCCGCAGCCCCCTGGGCTATG...GTATGTGAGGATACTTTCAGTACCACTCCTACCATTCATTTTTCTAAATTCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| CDS-3UTR CCA 90 bp | ATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAACATTCATGTGCCAGATaGCTCTATTGGCAGCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: ITPYHKGAQTKEAPTKAEHSCAR*LYWQRP Trigger: TGGCCGCTGCCAATAGAGCCATCTGGCACATGAATG...TTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR CCA 90 bp | ACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTGAGCATAGCCGCCCGCTCTTCTaGGAATTTGAATCTGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: TKEPKLRRHQLRLKQTEHSRPLF*EFESAN Trigger: GTTGGCAGATTCAAATTCCCAGAAGAGCGGGCGGCT...ATGCTCAGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR CCA 90 bp | ACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTGAGCATTCTAGCACAGCCTTTTaGGCAGCCTCGTGTGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: TKEPKLRRHQLRLKQTEHSSTAF*AASCVS Trigger: TGAGACACACGAGGCTGCCCAAAAGGCTGTGCTAGA...ATGCTCAGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR CCA 90 bp | CATAAAATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGTCCGGAGAGACTGACTaGCAAACGCGCAGTGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: HKITPYHKGAQTKEAPTKSGETD*QTRSEW Trigger: CCACTCACTGCGCGTTTGCCAGTCAGTCTCTCCGGA...CTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTATTTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373105.1 |
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| CDS-3UTR GCA 90 bp | ATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAACGCACTCCATTCATGTaGCAGATGGCTCTATTGGCA | + |
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Preference number: 4 (lower is better) Translates to: ITPYHKGAQTKEAPTKAERTPFM*QMALLA Trigger: TGCCAATAGAGCCATCTGGCACATGAATGGAGTGCG...TTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR GCA 90 bp | ACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTGAGCATCCACACCAAATCCTTTaGCTTGCCCCACTTCCATCA | + |
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Preference number: 4 (lower is better) Translates to: TKEPKLRRHQLRLKQTEHPHQIL*LAPLPS Trigger: TGATGGAAGTGGGGCAAGGCAAAGGATTTGGTGTGG...ATGCTCAGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR CCA 90 bp | CATAAAATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGCTGCCAACATACACCTaGCGGTTGTTGAGCCGCACT | + |
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Preference number: 4 (lower is better) Translates to: HKITPYHKGAQTKEAPTKLPTYT*RLLSRT Trigger: AGTGCGGCTCAACAACCGCCAGGTGTATGTTGGCAG...CTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTATTTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR TCA 90 bp | AAGGAATTTAGAAAAATGAATGGTAGGAGTGGTACTGAAAGTATCCTCACATACGCGAGTGAGGCGCGGTaGTTTCAGCAGCCTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KEFRKMNGRSGTESILTYASEAR*FQQPEA Trigger: AGCCTCAGGCTGCTGAAATCACCGCGCCTCACTCGC...GTATGTGAGGATACTTTCAGTACCACTCCTACCATTCATTTTTCTAAATTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| CDS-3UTR CCA 90 bp | CATAAAATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGAGCCGCCCGCTCTTCTaGGAATTTGAATCTGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: HKITPYHKGAQTKEAPTKSRPLF*EFESAN Trigger: GTTGGCAGATTCAAATTCCCAGAAGAGCGGGCGGCT...CTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTATTTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR TCA 90 bp | AAGGAATTTAGAAAAATGAATGGTAGGAGTGGTACTGAAAGTATCCTCACATACCACTGTCGAGGCGAGTaGGGCGCGGTGATTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: KEFRKMNGRSGTESILTYHCRGE*GAVISA Trigger: TGCTGAAATCACCGCGCCTCACTCGCCTCGACAGTG...GTATGTGAGGATACTTTCAGTACCACTCCTACCATTCATTTTTCTAAATTCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| CDS-3UTR TCA 90 bp | ACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTGAGCATGCTCTTCTGGGAATTTaGATCTGCCAACATACACCT | + |
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Preference number: 4 (lower is better) Translates to: TKEPKLRRHQLRLKQTEHALLGI*ICQHTP Trigger: AGGTGTATGTTGGCAGATTCAAATTCCCAGAAGAGC...ATGCTCAGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR TCA 90 bp | CATAAAATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGATGGAAGGCAGGCAATaGGGAGAACAGGAAACTGCA | + |
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Preference number: 4 (lower is better) Translates to: HKITPYHKGAQTKEAPTKMEGRQ*GEQETA Trigger: TGCAGTTTCCTGTTCTCCTCATTGCCTGCCTTCCAT...CTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTATTTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| CDS-3UTR CCA 90 bp | CTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTCATCTCTCTGAGCACTaGGAGGAGGTTCTCTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: LITKEPKLRRHQLRLKQTHLSEH*EEVLFE Trigger: TTCAAAGAGAACCTCCTCCCAGTGCTCAGAGAGATG...AGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| CDS-3UTR TCA 90 bp | TTGGGCAAGAAGTTAATACGACCACTCCCAACATTTAGTCAAAAGTACTATCAAAGAGCATGTCCTCGGTaGCATCTGGGTCCAAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: LGKKLIRPLPTFSQKYYQRACPR*HLGPSH Trigger: GTGACTTGGACCCAGATGTCACCGAGGACATGCTCT...TTGATAGTACTTTTGACTAAATGTTGGGAGTGGTCGTATTAACTTCTTGCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| CDS-3UTR TCA 90 bp | TTGGGCAAGAAGTTAATACGACCACTCCCAACATTTAGTCAAAAGTACTATCAAACACCTGGCGGTTGTTaGGCCGCACTCCATTCATGT | + |
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Preference number: 4 (lower is better) Translates to: LGKKLIRPLPTFSQKYYQTPGGC*AALHSC Trigger: ACATGAATGGAGTGCGGCTCAACAACCGCCAGGTGT...TTGATAGTACTTTTGACTAAATGTTGGGAGTGGTCGTATTAACTTCTTGCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| CDS-3UTR TCA 90 bp | CTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTGCTCTTCTGGGAATTTaGATCTGCCAACATACACCT | + |
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Preference number: 4 (lower is better) Translates to: LITKEPKLRRHQLRLKQTALLGI*ICQHTP Trigger: AGGTGTATGTTGGCAGATTCAAATTCCCAGAAGAGC...AGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR TCA 90 bp | ACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTGAGCATTTTGGCCCGACTAATTaGCCCAAAGGAAGAAAATTC | + |
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Preference number: 4 (lower is better) Translates to: TKEPKLRRHQLRLKQTEHFGPTN*PKGRKF Trigger: GAATTTTCTTCCTTTGGGTCAATTAGTCGGGCCAAA...ATGCTCAGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR GCA 90 bp | ATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAAACATTGGTGAAAGTTaGTCTATCCCTGGTTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: ITPYHKGAQTKEAPTKAENIGES*SIPGSD Trigger: GTCAGAACCAGGGATAGAGCAACTTTCACCAATGTT...TTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
||
| CDS-3UTR GCA 90 bp | CTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTTCGATGGACTTTCCATaGAAGTCTAGCACAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LITKEPKLRRHQLRLKQTSMDFP*KSSTAF Trigger: AAAGGCTGTGCTAGACTTGCATGGAAAGTCCATCGA...AGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
||
| CDS-3UTR GCA 90 bp | ATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAATTCAATTTTCTTCTGTaGTCGCCCTACATAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ITPYHKGAQTKEAPTKAEFNFLL*SPYIED Trigger: GTCCTCTATGTAGGGCGAGCACAGAAGAAAATTGAA...TTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
||
| CDS-3UTR GCA 90 bp | ACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTGAGCATTTCAATTTTCTTCTGTaGTCGCCCTACATAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TKEPKLRRHQLRLKQTEHFNFLL*SPYIED Trigger: GTCCTCTATGTAGGGCGAGCACAGAAGAAAATTGAA...ATGCTCAGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
||
| CDS-3UTR TCA 90 bp | CTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTTTTGGCCCGACTAATTaGCCCAAAGGAAGAAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: LITKEPKLRRHQLRLKQTFGPTN*PKGRKF Trigger: GAATTTTCTTCCTTTGGGTCAATTAGTCGGGCCAAA...AGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
||
| CDS-3UTR GCA 90 bp | CATAAAATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGCATCGCATACGACTTTaGAGGACAGAATGTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HKITPYHKGAQTKEAPTKHRIRL*RTECSQ Trigger: TTGGGAACATTCTGTCCTGCAAAGTCGTATGCGATG...CTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTATTTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312600.4 |
||
| CDS-3UTR GCA 90 bp | CTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTATTCATCTCATCCACTaGTTTGGTAGCCTCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LITKEPKLRRHQLRLKQTIHLIH*FGSLFK Trigger: TTTGAAGAGGCTACCAAAGCAGTGGATGAGATGAAT...AGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
||
| CDS-3UTR CCA 90 bp | ATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAACCACATAAGGCGGAATaGTTTTCCATTAATCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: ITPYHKGAQTKEAPTKAEPHKAE*FSINQI Trigger: GATTTGATTAATGGAAAACCATTCCGCCTTATGTGG...TTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312600.4 |
||
| CDS-3UTR CCA 90 bp | AAGGAATTTAGAAAAATGAATGGTAGGAGTGGTACTGAAAGTATCCTCACATACTCTAGCACAGCCTTTTaGGCAGCCTCGTGTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KEFRKMNGRSGTESILTYSSTAF*AASCVS Trigger: TGAGACACACGAGGCTGCCCAAAAGGCTGTGCTAGA...GTATGTGAGGATACTTTCAGTACCACTCCTACCATTCATTTTTCTAAATTCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312600.4 |
||
| CDS-3UTR TCA 90 bp | TTGGGCAAGAAGTTAATACGACCACTCCCAACATTTAGTCAAAAGTACTATCAACGTACAGAGCGGCCTTaGGATACTTCTTTTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGKKLIRPLPTFSQKYYQRTERP*DTSFSC Trigger: GCAAGAAAAAGAAGTATCTCAAGGCCGCTCTGTACG...TTGATAGTACTTTTGACTAAATGTTGGGAGTGGTCGTATTAACTTCTTGCCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312600.4 |
||
| CDS-3UTR TCA 90 bp | CATAAAATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGTTTCCCCTGCTGTACTaGCTTCTCAAAAACAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: HKITPYHKGAQTKEAPTKFPLLY*LLKNKL Trigger: TAACTTGTTTTTGAGAAGTCAGTACAGCAGGGGAAA...CTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTATTTTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000312600.4 |
||
| CDS-3UTR TCA 90 bp | CTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTCCTTTGAAACACCTGTaGATATTATCAAAAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: LITKEPKLRRHQLRLKQTPLKHL*ILSKGH Trigger: GTGTCCTTTTGATAATATTCACAGGTGTTTCAAAGG...AGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312600.4 |
||
| CDS-3UTR GCA 90 bp | AAGGAATTTAGAAAAATGAATGGTAGGAGTGGTACTGAAAGTATCCTCACATACCGCACTCCATTCATGTaGCAGATGGCTCTATTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KEFRKMNGRSGTESILTYRTPFM*QMALLA Trigger: TGCCAATAGAGCCATCTGGCACATGAATGGAGTGCG...GTATGTGAGGATACTTTCAGTACCACTCCTACCATTCATTTTTCTAAATTCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312600.4 |
||
| CDS-3UTR GCA 90 bp | CTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTATATACTCAATCAATTaGCTCACCTTGACTGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LITKEPKLRRHQLRLKQTIYSIN*LTLTVQ Trigger: CTGAACAGTCAAGGTGAGGCAATTGATTGAGTATAT...AGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312600.4 |
||
| CDS-3UTR CCA 90 bp | CTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTTTTAACACTCTCAGTTaGCCCATATTCACAGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LITKEPKLRRHQLRLKQTFNTLS*PIFTEK Trigger: CTTTTCTGTGAATATGGGCCAACTGAGAGTGTTAAA...AGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
||
| CDS-3UTR CCA 90 bp | ATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAGGTATTTCTGAACTGTaGAAATTTTACTTCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ITPYHKGAQTKEAPTKAEGISEL*KFYFLL Trigger: CAGAAGGAAGTAAAATTTCCACAGTTCAGAAATACC...TTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312600.4 |
||
| CDS-3UTR GCA 90 bp | TTGGGCAAGAAGTTAATACGACCACTCCCAACATTTAGTCAAAAGTACTATCAATCGATGGACTTTCCATaGAAGTCTAGCACAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGKKLIRPLPTFSQKYYQSMDFP*KSSTAF Trigger: AAAGGCTGTGCTAGACTTGCATGGAAAGTCCATCGA...TTGATAGTACTTTTGACTAAATGTTGGGAGTGGTCGTATTAACTTCTTGCCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312600.4 |
||
| CDS-3UTR CCA 90 bp | AAGGAATTTAGAAAAATGAATGGTAGGAGTGGTACTGAAAGTATCCTCACATACGCTTTCTCTAAGCTATaGGCCAAACAGCTGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: KEFRKMNGRSGTESILTYAFSKL*AKQLFT Trigger: CGTGAACAGCTGTTTGGCCCATAGCTTAGAGAAAGC...GTATGTGAGGATACTTTCAGTACCACTCCTACCATTCATTTTTCTAAATTCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312600.4 |
||
| CDS-3UTR CCA 90 bp | TTGGGCAAGAAGTTAATACGACCACTCCCAACATTTAGTCAAAAGTACTATCAATTTAACACTCTCAGTTaGCCCATATTCACAGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGKKLIRPLPTFSQKYYQFNTLS*PIFTEK Trigger: CTTTTCTGTGAATATGGGCCAACTGAGAGTGTTAAA...TTGATAGTACTTTTGACTAAATGTTGGGAGTGGTCGTATTAACTTCTTGCCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312600.4 |
||
| CDS GCA 90 bp | GCGGGTCTGGCCAGATGCGGGGCGGAGTCAGCGAAGAAGGGCAGATaGGCGGCGGGCGGTCCCAGCGCAGACCGATGGGCTGGGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGLARCGAESAKKGR*AAGGPSADRWAGVS Trigger: AGAAACCCCAGCCCATCGGTCTGCGCTGGGACCGCCCGCCGCGCATCTGCCCTTCTTCGCTGACTCCGCCCCGCATCTGGCCAGACCCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373105.1 |
||
| CDS CCA 90 bp | GAAGGGCAGATGCGCGGCGGGCGGTCCCAGCGCAGACCGATGGGCTaGGGTTTCTCTCCGCAGGACAGTCCAACGGAGGGACCAAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EGQMRGGRSQRRPMG*GFSPQDSPTEGPRA Trigger: GGCTCTTGGTCCCTCCGTTGGACTGTCCTGCGGAGAGAAACCCCAGCCCATCGGTCTGCGCTGGGACCGCCCGCCGCGCATCTGCCCTTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373105.1 |
||
| CDS CCA 90 bp | GCTCGAGGCAGGTCCGGAGAGACTGACTGGCAAACGCGCAGTGAGTaGGTCAGCTCTGACGCGAGGCGGGTCTGGCCAGATGCGGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ARGRSGETDWQTRSE*VSSDARRVWPDAGR Trigger: CCGCCCCGCATCTGGCCAGACCCGCCTCGCGTCAGAGCTGACCCACTCACTGCGCGTTTGCCAGTCAGTCTCTCCGGACCTGCCTCGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373105.1 |
||
| CDS CCA 90 bp | GCGAAGAAGGGCAGATGCGCGGCGGGCGGTCCCAGCGCAGACCGATaGGCTGGGGTTTCTCTCCGCAGGACAGTCCAACGGAGGGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: AKKGRCAAGGPSADR*AGVSLRRTVQRRDQ Trigger: TTGGTCCCTCCGTTGGACTGTCCTGCGGAGAGAAACCCCAGCCCATCGGTCTGCGCTGGGACCGCCCGCCGCGCATCTGCCCTTCTTCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373105.1 |
||
| CDS CCA 90 bp | TGGCAAACGCGCAGTGAGTGGGTCAGCTCTGACGCGAGGCGGGTCTaGCCAGATGCGGGGCGGAGTCAGCGAAGAAGGGCAGATGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: WQTRSEWVSSDARRV*PDAGRSQRRRADAR Trigger: CCGCGCATCTGCCCTTCTTCGCTGACTCCGCCCCGCATCTGGCCAGACCCGCCTCGCGTCAGAGCTGACCCACTCACTGCGCGTTTGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373105.1 |
||
| CDS GCA 90 bp | CTGCCAACATACACCTGGCGGTTGTTGAGCCGCACTCCATTCATGTaGCAGATGGCTCTATTGGCAGCGGCCAGGCGAGTGAGGCGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LPTYTWRLLSRTPFM*QMALLAAARRVRRG Trigger: ACCGCGCCTCACTCGCCTGGCCGCTGCCAATAGAGCCATCTGGCACATGAATGGAGTGCGGCTCAACAACCGCCAGGTGTATGTTGGCAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373105.1 |
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| CDS-3UTR CAA 90 bp | CATAAAATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGTGACATGCAGGGGCTaGGAGCCCACTATGCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HKITPYHKGAQTKEAPTKVTCRG*EPTMRP Trigger: TGGCCGCATAGTGGGCTCCAAGCCCCTGCATGTCAC...CTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTATTTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR CAA 90 bp | CATAAAATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGTGCCAGATGGCTCTATaGGCAGCGGCCAGGCGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HKITPYHKGAQTKEAPTKCQMAL*AAARRV Trigger: CACTCGCCTGGCCGCTGCCAATAGAGCCATCTGGCA...CTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTATTTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373105.1 |
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| CDS GCA 90 bp | GCCTCTTCAAAAGAGGAAAAGCAGACCACACCAAATCCTTTGCCTTaGCCCACTTCCATCATCACTTTGGCCCGACTAATTGACCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ASSKEEKQTTPNPLP*PTSIITLARLIDPK Trigger: CTTTGGGTCAATTAGTCGGGCCAAAGTGATGATGGAAGTGGGGCAAGGCAAAGGATTTGGTGTGGTCTGCTTTTCCTCTTTTGAAGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR CAA 90 bp | CTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTTACACCTGGCGGTTGTaGAGCCGCACTCCATTCATG | + |
|
Preference number: 5 (lower is better) Translates to: LITKEPKLRRHQLRLKQTYTWRL*SRTPFM Trigger: CATGAATGGAGTGCGGCTCAACAACCGCCAGGTGTA...AGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS-3UTR CAA 90 bp | ACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTGAGCATACCACACCAAATCCTTaGCCTTGCCCCACTTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: TKEPKLRRHQLRLKQTEHTTPNP*PCPTSI Trigger: GATGGAAGTGGGGCAAGGCAAAGGATTTGGTGTGGT...ATGCTCAGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
||
| CDS GCA 90 bp | TTCAAATCTCCGCCTCAACTCAGCCAGGCGTTCAATTTTCTTCTGTaGTCGCCCTACATAGAGGACTTTTCCATCGATGGACTTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: FKSPPQLSQAFNFLL*SPYIEDFSIDGLSM Trigger: CATGGAAAGTCCATCGATGGAAAAGTCCTCTATGTAGGGCGAGCACAGAAGAAAATTGAACGCCTGGCTGAGTTGAGGCGGAGATTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
||
| CDS-3UTR CAA 90 bp | TTGGGCAAGAAGTTAATACGACCACTCCCAACATTTAGTCAAAAGTACTATCAATGCCAGATGGCTCTATaGGCAGCGGCCAGGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGKKLIRPLPTFSQKYYQCQMAL*AAARLS Trigger: TGACAGCCTGGCCGCTGCCAATAGAGCCATCTGGCA...TTGATAGTACTTTTGACTAAATGTTGGGAGTGGTCGTATTAACTTCTTGCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312600.4 |
||
| CDS-3UTR CAA 90 bp | ACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTGAGCATCGCTCTTCTGGGAATTaGAATCTGCCAACATACACC | + |
|
Preference number: 5 (lower is better) Translates to: TKEPKLRRHQLRLKQTEHRSSGN*NLPTYT Trigger: GGTGTATGTTGGCAGATTCAAATTCCCAGAAGAGCG...ATGCTCAGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
||
| CDS-3UTR CAA 90 bp | ACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTGAGCATACTTCCATCATCACTTaGGCCCGACTAATTGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: TKEPKLRRHQLRLKQTEHTSIIT*ARLIDP Trigger: TGGGTCAATTAGTCGGGCCAAAGTGATGATGGAAGT...ATGCTCAGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
||
| CDS-3UTR CAA 90 bp | ATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACTTCCATCATCACTTaGGCCCGACTAATTGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: ITPYHKGAQTKEAPTKAETSIIT*ARLIDP Trigger: TGGGTCAATTAGTCGGGCCAAAGTGATGATGGAAGT...TTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
||
| CDS-3UTR CAA 90 bp | CTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTACCAAATCCTTTGCCTaGCCCCACTTCCATCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: LITKEPKLRRHQLRLKQTTKSFA*PHFHHH Trigger: GTGATGATGGAAGTGGGGCAAGGCAAAGGATTTGGT...AGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
||
| CDS-3UTR CAA 90 bp | AAGGAATTTAGAAAAATGAATGGTAGGAGTGGTACTGAAAGTATCCTCACATACGTGACATGCAGGGGCTaGGAGCCCACTATGCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KEFRKMNGRSGTESILTYVTCRG*EPTMRP Trigger: TGGCCGCATAGTGGGCTCCAAGCCCCTGCATGTCAC...GTATGTGAGGATACTTTCAGTACCACTCCTACCATTCATTTTTCTAAATTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312600.4 |
||
| CDS-3UTR CAA 90 bp | CATAAAATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGACCAAATCCTTTGCCTaGCCCCACTTCCATCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: HKITPYHKGAQTKEAPTKTKSFA*PHFHHH Trigger: GTGATGATGGAAGTGGGGCAAGGCAAAGGATTTGGT...CTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTATTTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
||
| CDS-3UTR CAA 90 bp | CATAAAATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGTCATCGCATACGACTTaGCAGGACAGAATGTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HKITPYHKGAQTKEAPTKSSHTT*QDRMFP Trigger: TGGGAACATTCTGTCCTGCAAAGTCGTATGCGATGA...CTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTATTTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312600.4 |
||
| CDS-3UTR CAA 90 bp | TTGGGCAAGAAGTTAATACGACCACTCCCAACATTTAGTCAAAAGTACTATCAATACACCTGGCGGTTGTaGAGCCGCACTCCATTCATG | + |
|
Preference number: 5 (lower is better) Translates to: LGKKLIRPLPTFSQKYYQYTWRL*SRTPFM Trigger: CATGAATGGAGTGCGGCTCAACAACCGCCAGGTGTA...TTGATAGTACTTTTGACTAAATGTTGGGAGTGGTCGTATTAACTTCTTGCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312600.4 |
||
| CDS-3UTR CAA 90 bp | CATAAAATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGCGCTCTTCTGGGAATTaGAATCTGCCAACATACACC | + |
|
Preference number: 5 (lower is better) Translates to: HKITPYHKGAQTKEAPTKRSSGN*NLPTYT Trigger: GGTGTATGTTGGCAGATTCAAATTCCCAGAAGAGCG...CTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTATTTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
||
| CDS-3UTR CAA 90 bp | CTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGGCTGAAACAAACTATCTCATCCACTGCTTaGGTAGCCTCTTCAAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LITKEPKLRRHQLRLKQTISSTA*VASSKE Trigger: CTCTTTTGAAGAGGCTACCAAAGCAGTGGATGAGAT...AGTTTGTTTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
||
| CDS-3UTR CAA 90 bp | AAGGAATTTAGAAAAATGAATGGTAGGAGTGGTACTGAAAGTATCCTCACATACACATACACCTGGCGGTaGTTGAGCCGCACTCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: KEFRKMNGRSGTESILTYTYTWR*LSRTPF Trigger: GAATGGAGTGCGGCTCAACAACCGCCAGGTGTATGT...GTATGTGAGGATACTTTCAGTACCACTCCTACCATTCATTTTTCTAAATTCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312600.4 |
||
| CDS-3UTR CAA 90 bp | CATAAAATAACCCCTTATCACAAAGGAGCCCAAACTAAGGAGGCACCAACTAAGATCTCATCCACTGCTTaGGTAGCCTCTTCAAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HKITPYHKGAQTKEAPTKISSTA*VASSKE Trigger: CTCTTTTGAAGAGGCTACCAAAGCAGTGGATGAGAT...CTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGGTTATTTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
||
| CDS TCA 90 bp | ATGAATATATTTCCCACTCCAGACTTTCTTAAGCGGTCATCTGGCTaGGACCACATAAGGCGGAATGGTTTTCCATTAATCAAATCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: MNIFPTPDFLKRSSG*DHIRRNGFPLIKSK Trigger: TTTTGATTTGATTAATGGAAAACCATTCCGCCTTATGTGGTCTCAGCCAGATGACCGCTTAAGAAAGTCTGGAGTGGGAAATATATTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312600.4 |
||
| CDS-3UTR CAA 90 bp | AAGGAATTTAGAAAAATGAATGGTAGGAGTGGTACTGAAAGTATCCTCACATACGTACTGCCTTTTATATaGACAGTTGATAAAACCCGA | + |
|
Preference number: 5 (lower is better) Translates to: KEFRKMNGRSGTESILTYVLPFI*TVDKTR Trigger: TCGGGTTTTATCAACTGTCAATATAAAAGGCAGTAC...GTATGTGAGGATACTTTCAGTACCACTCCTACCATTCATTTTTCTAAATTCCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| CDS GCA 72 bp | GCCAGATGCGGGGCGGAGTCAGCGAAGAAGGGCAGATaGGCGGCGGGCGGTCCCAGCGCAGACCGATGGGCT | + |
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Preference number: 6 (lower is better) Translates to: ARCGAESAKKGR*AAGGPSADRWA Trigger: AGCCCATCGGTCTGCGCTGGGACCGCCCGCCGCGCATCTGCCCTTCTTCGCTGACTCCGCCCCGCATCTGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373105.1 |
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| CDS CCA 72 bp | ATGCGCGGCGGGCGGTCCCAGCGCAGACCGATGGGCTaGGGTTTCTCTCCGCAGGACAGTCCAACGGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: MRGGRSQRRPMG*GFSPQDSPTEG Trigger: TCCCTCCGTTGGACTGTCCTGCGGAGAGAAACCCCAGCCCATCGGTCTGCGCTGGGACCGCCCGCCGCGCAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373105.1 |
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| CDS CCA 72 bp | CGCAGTGAGTGGGTCAGCTCTGACGCGAGGCGGGTCTaGCCAGATGCGGGGCGGAGTCAGCGAAGAAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: RSEWVSSDARRV*PDAGRSQRRRA Trigger: TGCCCTTCTTCGCTGACTCCGCCCCGCATCTGGCCAGACCCGCCTCGCGTCAGAGCTGACCCACTCACTGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373105.1 |
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| CDS TCA 72 bp | GGCTCTATTGGCAGCGGCCAGGCGAGTGAGGCGCGGTaGTTTCAGCAGCCTGAGGCTCGAGGCAGGTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: GSIGSGQASEAR*FQQPEARGRSG Trigger: TCCGGACCTGCCTCGAGCCTCAGGCTGCTGAAATCACCGCGCCTCACTCGCCTGGCCGCTGCCAATAGAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373105.1 |
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| CDS CCA 72 bp | CAGCCTGAGGCTCGAGGCAGGTCCGGAGAGACTGACTaGCAAACGCGCAGTGAGTGGGTCAGCTCTGACGCG | + |
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Preference number: 6 (lower is better) Translates to: QPEARGRSGETD*QTRSEWVSSDA Trigger: CGCGTCAGAGCTGACCCACTCACTGCGCGTTTGCCAGTCAGTCTCTCCGGACCTGCCTCGAGCCTCAGGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373105.1 |
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| CDS CCA 72 bp | AGGTCCGGAGAGACTGACTGGCAAACGCGCAGTGAGTaGGTCAGCTCTGACGCGAGGCGGGTCTGGCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: RSGETDWQTRSE*VSSDARRVWPD Trigger: ATCTGGCCAGACCCGCCTCGCGTCAGAGCTGACCCACTCACTGCGCGTTTGCCAGTCAGTCTCTCCGGACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373105.1 |
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| CDS TCA 72 bp | AGACTCAGAATCACTGTCGAGGCGAGTGAGGCGCGGTaGTTTCAGCAGCCTGAGGCTCGAGGCAGGTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: RLRITVEASEAR*FQQPEARGRSG Trigger: TCCGGACCTGCCTCGAGCCTCAGGCTGCTGAAATCACCGCGCCTCACTCGCCTCGACAGTGATTCTGAGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| CDS CCA 72 bp | ACTGAGCATTCTTATTCTCAGCACCTGCGCCTGGCCTaGCCCAGGGTGACATGCAGGGGCTTGGAGCCCACT | + |
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Preference number: 6 (lower is better) Translates to: TEHSYSQHLRLA*PRVTCRGLEPT Trigger: AGTGGGCTCCAAGCCCCTGCATGTCACCCTGGGCCAGGCCAGGCGCAGGTGCTGAGAATAAGAATGCTCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS GCA 72 bp | TACACCTGGCGGTTGTTGAGCCGCACTCCATTCATGTaGCAGATGGCTCTATTGGCAGCGGCCAGGCGAGTG | + |
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Preference number: 6 (lower is better) Translates to: YTWRLLSRTPFM*QMALLAAARRV Trigger: CACTCGCCTGGCCGCTGCCAATAGAGCCATCTGGCACATGAATGGAGTGCGGCTCAACAACCGCCAGGTGTA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373105.1 |
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| CDS CAA 72 bp | TTGAGCCGCACTCCATTCATGTGCCAGATGGCTCTATaGGCAGCGGCCAGGCGAGTGAGGCGCGGTGATTTC | + |
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Preference number: 6 (lower is better) Translates to: LSRTPFMCQMAL*AAARRVRRGDF Trigger: GAAATCACCGCGCCTCACTCGCCTGGCCGCTGCCAATAGAGCCATCTGGCACATGAATGGAGTGCGGCTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373105.1 |
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| CDS GCA 72 bp | TACACCTGGCGGTTGTTGAGCCGCACTCCATTCATGTaGCAGATGGCTCTATTGGCAGCGGCCAGGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: YTWRLLSRTPFM*QMALLAAARLS Trigger: TGACAGCCTGGCCGCTGCCAATAGAGCCATCTGGCACATGAATGGAGTGCGGCTCAACAACCGCCAGGTGTA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| CDS GCA 72 bp | CCGCCTCAACTCAGCCAGGCGTTCAATTTTCTTCTGTaGTCGCCCTACATAGAGGACTTTTCCATCGATGGA | + |
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Preference number: 6 (lower is better) Translates to: PPQLSQAFNFLL*SPYIEDFSIDG Trigger: TCCATCGATGGAAAAGTCCTCTATGTAGGGCGAGCACAGAAGAAAATTGAACGCCTGGCTGAGTTGAGGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS CCA 72 bp | TCGATGGACTTTCCATGCAAGTCTAGCACAGCCTTTTaGGCAGCCTCGTGTGTCTCATATCTCACAAATCCA | + |
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Preference number: 6 (lower is better) Translates to: SMDFPCKSSTAF*AASCVSYLTNP Trigger: TGGATTTGTGAGATATGAGACACACGAGGCTGCCCAAAAGGCTGTGCTAGACTTGCATGGAAAGTCCATCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS GCA 72 bp | AAAGAGGAAAAGCAGACCACACCAAATCCTTTGCCTTaGCCCACTTCCATCATCACTTTGGCCCGACTAATT | + |
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Preference number: 6 (lower is better) Translates to: KEEKQTTPNPLP*PTSIITLARLI Trigger: AATTAGTCGGGCCAAAGTGATGATGGAAGTGGGGCAAGGCAAAGGATTTGGTGTGGTCTGCTTTTCCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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| CDS TCA 72 bp | TTTCCCACTCCAGACTTTCTTAAGCGGTCATCTGGCTaGGACCACATAAGGCGGAATGGTTTTCCATTAATC | + |
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Preference number: 6 (lower is better) Translates to: FPTPDFLKRSSG*DHIRRNGFPLI Trigger: GATTAATGGAAAACCATTCCGCCTTATGTGGTCTCAGCCAGATGACCGCTTAAGAAAGTCTGGAGTGGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312600.4 |
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| CDS CAA 72 bp | TCATCTATGTCGTCTCCAATGTTTTTAACGAAAACATaGGTGAAAGTTGCTCTATCCCTGGTTCTGACCTCA | + |
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Preference number: 6 (lower is better) Translates to: SSMSSPMFLTKT*VKVALSLVLTS Trigger: TGAGGTCAGAACCAGGGATAGAGCAACTTTCACCAATGTTTTCGTTAAAAACATTGGAGACGACATAGATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000312600.4 ENST00000373105.1 |
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