Pregenerated sensors for PABPC4L (Homo sapiens)
Ensembl gene IDs: ENSG00000254535Ensembl transcript IDs: ENST00000421491.4
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTGCTGAGGAATATAGATaGAAGGCAGGAGAGCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPAEEYR*KAGEQG Trigger: TCCTTGCTCTCCTGCCTTTCATCTATATTCCTCAGC...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| 3UTR-3UTR TCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTGGCATTCTCCTACAATaGCAATGGAAATGTAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPGILLQ*QWKCKC Trigger: GCACTTACATTTCCATTGTCATTGTAGGAGAATGCC...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| 3UTR-3UTR CCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTGCTGCAGATACTAGCTaGAAAGGTACGTTTTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPAADTS*KGTFFF Trigger: AAAGAAAAACGTACCTTTCCAGCTAGTATCTGCAGC...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| 3UTR-3UTR TCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTGAATATGAAATTTACTaGGGTCAATTCAGGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPEYEIY*GQFRQR Trigger: TCTCTGCCTGAATTGACCTCAGTAAATTTCATATTC...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| 3UTR-3UTR TCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTTGTGCCTCTGTAAAATaGACTAAGCTCCATCTATTT | + |
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Preference number: 2 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPCASVK*TKLHLF Trigger: AAATAGATGGAGCTTAGTTCATTTTACAGAGGCACA...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| 3UTR-3UTR GCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTAATGGGTTCCATAGCTaGCACATTCTAATAAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPNGFHS*HILIKG Trigger: TCCTTTTATTAGAATGTGGCAGCTATGGAACCCATT...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| 3UTR-3UTR CCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTCCAACTCTAATTCATTaGCTCTCTGAATCAAGTATT | + |
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Preference number: 2 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPPTLIH*LSESSI Trigger: AATACTTGATTCAGAGAGCCAATGAATTAGAGTTGG...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| 3UTR-3UTR CAA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTAACAAAAGCACTTGCTaGCTAGATACCTTTGGTATG | + |
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Preference number: 3 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPNKSTC*LDTFGM Trigger: CATACCAAAGGTATCTAGCAAGCAAGTGCTTTTGTT...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| 3UTR-3UTR CAA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTAAAAACCCTTGTTTCTaGGAGCATATGGAAATAGGC | + |
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Preference number: 3 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPKNPCF*EHMEIG Trigger: GCCTATTTCCATATGCTCCAAGAAACAAGGGTTTTT...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR TCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTCCGGAACTCGCGCGCTaGACTTCCCGCGCACTCGCT | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPPELAR*TSRALA Trigger: AGCGAGTGCGCGGGAAGTTCAGCGCGCGAGTTCCGG...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR TCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTCCAGAGAGCGGCGGGTaGCCTGGTCCCTGCAAATGC | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPPESGG*PGPCKC Trigger: GCATTTGCAGGGACCAGGTCACCCGCCGCTCTCTGG...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTGGCCCGGTTCAAGTGTaGAGGCCTCGGGATCACCAC | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPGPVQV*RPRDHH Trigger: GTGGTGATCCCGAGGCCTCCACACTTGAACCGGGCC...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTCCCTGCAAATGCGGATaGACAGCACAGGCCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPPCKCG*TAQAPQ Trigger: CTGTGGGGCCTGTGCTGTCCATCCGCATTTGCAGGG...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTGTGTCCAGCGCCTTCTaGGCATCAGCCAGCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPVSSAF*ASASCK Trigger: CTTGCAGCTGGCTGATGCCCAGAAGGCGCTGGACAC...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR TCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTTTGTCCTTGCCACTGTaGGTTTGTCCCCTGGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPLSLPL*VCPLEF Trigger: GAACTCCAGGGGACAAACTCACAGTGGCAAGGACAA...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR TCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTACAGCAGGTCCTCGGTaGCATCTGCATGTAAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPTAGPR*HLHVSH Trigger: GTGACTTACATGCAGATGTCACCGAGGACCTGCTGT...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR GCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTCATACAGGGAGGCCATaGGGTACTTGGCTGCTACAT | + |
|
Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPHTGRP*GTWLLH Trigger: ATGTAGCAGCCAAGTACCGCATGGCCTCCCTGTATG...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR GCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTCCAAACCCTTTGCTCTaGCCCTCTTCCTGCATTACC | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPPNPLL*PSSCIT Trigger: GGTAATGCAGGAAGAGGGGCAGAGCAAAGGGTTTGG...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR GCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTTCAAGCCAAACCCTTTaGTCTGCCCCTCTTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPSSQTL*SAPLPA Trigger: TGCAGGAAGAGGGGCAGAGCAAAGGGTTTGGCTTGA...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTACTAGGTCACAGCTTTaGCCCGGTTCAAGTGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPTRSQL*PGSSVE Trigger: CTCCACACTTGAACCGGGCCAAAGCTGTGACCTAGT...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR GCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTTCATCTCCTTGTCCTTaGCACTGTGAGTTTGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPSSPCP*HCEFVP Trigger: GGGGACAAACTCACAGTGGCAAGGACAAGGAGATGA...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR GCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTCTCAATGGCCCTGTCTaGAGCACTCTGGTTCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPLNGPV*STLVLK Trigger: TTTCAGAACCAGAGTGCTGCAGACAGGGCCATTGAG...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTACAAAGGCCAAGCAATaGAGTTCAGACACGACTCCC | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPTKAKQ*SSDTTP Trigger: GGGAGTCGTGTCTGAACTCCATTGCTTGGCCTTTGT...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTTTTGAGCAATCCCTGTaGGGGGATACTAGGTCACAG | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPFEQSL*GDTRSQ Trigger: CTGTGACCTAGTATCCCCCCACAGGGATTGCTCAAA...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTAGGCCATGCGGTACTTaGCTGCTACATTCATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPRPCGT*LLHSSP Trigger: AGGAGATGAATGTAGCAGCCAAGTACCGCATGGCCT...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR TCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTCACTGGCTTTGCTTCTaGGTTCAGCTTCACGATCTT | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPHWLCF*VQLHDL Trigger: AAGATCGTGAAGCTGAACTCAGAAGCAAAGCCAGTG...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR GCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTCATGCGGTACTTGGCTaGTACATTCATCTCCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPHAVLG*YIHLLV Trigger: GACAAGGAGATGAATGTAGCAGCCAAGTACCGCATG...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR GCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTCTCTGCCCCTCTTCCTaGATTACCTTAACTCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPLCPSS*ITLTLL Trigger: TAGCAGAGTTAAGGTAATGCAGGAAGAGGGGCAGAG...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTTGTGAGTTTGTCCCCTaGAGTTCTTTGAGCAATCCC | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPCEFVP*SSLSNP Trigger: GGGATTGCTCAAAGAACTCCAGGGGACAAACTCACA...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR GCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTAGCTGCTCAAACATTTaGTTTAACTCAGCCTGTCGC | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPSCSNI*FNSACR Trigger: GCGACAGGCTGAGTTAAAGCAAATGTTTGAGCAGCT...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTCTTCAACAGCTTTCTTaGCAGCCTCATGGCTATCAA | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPLQQLS*QPHGYQ Trigger: TTGATAGCCATGAGGCTGCCAAGAAAGCTGTTGAAG...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTACTACACAGCAGACGTaGCAATATGTGTGGAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPTTQQT*QYVWRE Trigger: TTCTCTCCACACATATTGCCACGTCTGCTGTGTAGT...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR GCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTCCTACAAAAATCAGCTaGCCATTTATGTCCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPPTKIS*PFMSLP Trigger: TGGAAGGGACATAAATGGGCAGCTGATTTTTGTAGG...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTCATCACTCATCACCTTaGAGGAAAGGATCTTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPHHSSP*RKGSFQ Trigger: TTGGAAAGATCCTTTCCTCCAAGGTGATGAGTGATG...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTTTCTTGGCAGCCTCATaGCTATCAAAACTCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPFLAAS*LSKLTK Trigger: CTTTGTGAGTTTTGATAGCCATGAGGCTGCCAAGAA...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR TCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTGATCTTTTCGGTTTTTaGATCTGCCAACAAACACCT | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPDLFGF*ICQQTP Trigger: AGGTGTTTGTTGGCAGATTCAAAAACCGAAAAGATC...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR TCA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTTTTTGCCATATTTGCTaGAAACGTCCTTCAATCTCT | + |
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Preference number: 4 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPFCHIC*KRPSIS Trigger: AGAGATTGAAGGACGTTTTCAGCAAATATGGCAAAA...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS CCA 90 bp | GTTCAAGTGTGGAGGCCTCGGGATCACCACACAAAGGCCAAGCAATaGAGTTCAGACACGACTCCCCCAGCTCAGGCAACACCCTCATCC | + |
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Preference number: 5 (lower is better) Translates to: VQVWRPRDHHTKAKQ*SSDTTPPAQATPSS Trigger: GGATGAGGGTGTTGCCTGAGCTGGGGGAGTCGTGTCTGAACTCCATTGCTTGGCCTTTGTGTGGTGATCCCGAGGCCTCCACACTTGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS GCA 90 bp | GGGAGGCCATGCGGTACTTGGCTGCTACATTCATCTCCTTGTCCTTaGCACTGTGAGTTTGTCCCCTGGAGTTCTTTGAGCAATCCCTGT | + |
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Preference number: 5 (lower is better) Translates to: GRPCGTWLLHSSPCP*HCEFVPWSSLSNPC Trigger: ACAGGGATTGCTCAAAGAACTCCAGGGGACAAACTCACAGTGGCAAGGACAAGGAGATGAATGTAGCAGCCAAGTACCGCATGGCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CAA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTGAGGCCATGCGGTACTaGGCTGCTACATTCATCTCC | + |
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Preference number: 5 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPEAMRY*AATFIS Trigger: GGAGATGAATGTAGCAGCCAAGTACCGCATGGCCTC...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CAA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTATCAAGCCAAACCCTTaGCTCTGCCCCTCTTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPIKPNP*LCPSSC Trigger: GCAGGAAGAGGGGCAGAGCAAAGGGTTTGGCTTGAT...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CAA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTGCAATGCTAAGAGGTTaGGAGCCCAAGATGCGGCCA | + |
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Preference number: 5 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPAMLRG*EPKMRP Trigger: TGGCCGCATCTTGGGCTCCAAACCTCTTAGCATTGC...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CAA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTATAGCCCTTGGAGCCTaGATCATCACTCATCACCTT | + |
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Preference number: 5 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPIALGA*IITHHL Trigger: AAGGTGATGAGTGATGATCAAGGCTCCAAGGGCTAT...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CAA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTCTGCCAACAAACACCTaGCAGCCCTTGAGTAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPLPTNT*QPLSSF Trigger: AAAACTACTCAAGGGCTGCAAGGTGTTTGTTGGCAG...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CAA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTTCTTCAACAGCTTTCTaGGCAGCCTCATGGCTATCA | + |
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Preference number: 5 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPSSTAF*AASWLS Trigger: TGATAGCCATGAGGCTGCCAAGAAAGCTGTTGAAGA...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CAA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTTCATCACTCATCACCTaGGAGGAAAGGATCTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPSSLIT*EERIFP Trigger: TGGAAAGATCCTTTCCTCCAAGGTGATGAGTGATGA...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CAA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTAACACCTTGCAGCCCTaGAGTAGTTTTCCATTCATC | + |
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Preference number: 5 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPNTLQP*SSFPFI Trigger: GATGAATGGAAAACTACTCAAGGGCTGCAAGGTGTT...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CAA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTGTGAATTCACTGGCTTaGCTTCTGAGTTCAGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPVNSLA*LLSSAS Trigger: TGAAGCTGAACTCAGAAGCAAAGCCAGTGAATTCAC...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CAA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTATGAGACGGATGGATTaGCCTTTTATGATGTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPMRRMD*PFMMSK Trigger: CTTTGACATCATAAAAGGCAAATCCATCCGTCTCAT...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS-3UTR CAA 90 bp | TGTCAAGGCCAGGCACACTTAATACACTTTCCAGTCTTGTTGTCTGGTAAACCTATACACTTTCCAGTCTaGTTGTCTGGTAAACCTTTT | + |
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Preference number: 5 (lower is better) Translates to: CQGQAHLIHFPVLLSGKPIHFPV*LSGKPF Trigger: AAAAGGTTTACCAGACAACAAGACTGGAAAGTGTAT...AGGTTTACCAGACAACAAGACTGGAAAGTGTATTAAGTGTGCCTGGCCTTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS CCA 72 bp | TGGAGGCCTCGGGATCACCACACAAAGGCCAAGCAATaGAGTTCAGACACGACTCCCCCAGCTCAGGCAACA | + |
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Preference number: 6 (lower is better) Translates to: WRPRDHHTKAKQ*SSDTTPPAQAT Trigger: TGTTGCCTGAGCTGGGGGAGTCGTGTCTGAACTCCATTGCTTGGCCTTTGTGTGGTGATCCCGAGGCCTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS CCA 72 bp | GGGATACTAGGTCACAGCTTTGGCCCGGTTCAAGTGTaGAGGCCTCGGGATCACCACACAAAGGCCAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: GILGHSFGPVQV*RPRDHHTKAKQ Trigger: TTGCTTGGCCTTTGTGTGGTGATCCCGAGGCCTCCACACTTGAACCGGGCCAAAGCTGTGACCTAGTATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS GCA 72 bp | TGCGGTACTTGGCTGCTACATTCATCTCCTTGTCCTTaGCACTGTGAGTTTGTCCCCTGGAGTTCTTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: CGTWLLHSSPCP*HCEFVPWSSLS Trigger: GCTCAAAGAACTCCAGGGGACAAACTCACAGTGGCAAGGACAAGGAGATGAATGTAGCAGCCAAGTACCGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS TCA 72 bp | TTGGCTGCTACATTCATCTCCTTGTCCTTGCCACTGTaGGTTTGTCCCCTGGAGTTCTTTGAGCAATCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LAATFISLSLPL*VCPLEFFEQSL Trigger: CAGGGATTGCTCAAAGAACTCCAGGGGACAAACTCACAGTGGCAAGGACAAGGAGATGAATGTAGCAGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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| CDS CAA 72 bp | CGGTTTTTGAATCTGCCAACAAACACCTTGCAGCCCTaGAGTAGTTTTCCATTCATCTCCTCAATGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: RFLNLPTNTLQP*SSFPFISSMAL Trigger: CAGGGCCATTGAGGAGATGAATGGAAAACTACTCAAGGGCTGCAAGGTGTTTGTTGGCAGATTCAAAAACCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000421491.4 |
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