Pregenerated sensors for PABPC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000151846

Ensembl transcript IDs: ENST00000281589.5

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR CCA 90 bp	AAGGAGAATGCTCAAATGGGCTGTCCTTTTATACAATTCACTAGGTGTAACATTGAGGAGGAGGGATGGTaGGAAGAGGTAGATGAAACA	+
Preference number: 2 (lower is better) Translates to: KENAQMGCPFIQFTRCNIEEEGW*EEVDET Trigger: TGTTTCATCTACCTCTTCCCACCATCCCTCCTCCTC...AATGTTACACCTAGTGAATTGTATAAAAGGACAGCCCATTTGAGCATTCTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281589.5
CDS-3UTR CCA 90 bp	GGAGCTACAAGTAGTGATAAATTATATTGGGAGGAGGAGGAGGGATGGTGGGAAGAGGTGCTCGCTGGTTaGGCACAGCTCGTACACTTG	+
Preference number: 4 (lower is better) Translates to: GATSSDKLYWEEEEGWWEEVLAG*AQLVHL Trigger: CAAGTGTACGAGCTGTGCCCAACCAGCGAGCACCTC...TTCCCACCATCCCTCCTCCTCCTCCCAATATAATTTATCACTACTTGTAGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281589.5
CDS-3UTR GCA 90 bp	GGAGCTACAAGTAGTGATAAATTATATTGGGAGGAGGAGGAGGGATGGTGGGAAATGGTGTCCAGAGCATaGTCCGCGTCCTTCGTATGC	+
Preference number: 4 (lower is better) Translates to: GATSSDKLYWEEEEGWWEMVSRA*SASFVC Trigger: GCATACGAAGGACGCGGAGCATGCTCTGGACACCAT...TTCCCACCATCCCTCCTCCTCCTCCCAATATAATTTATCACTACTTGTAGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281589.5
CDS-3UTR TCA 90 bp	AAGGAGAATGCTCAAATGGGCTGTCCTTTTATACAATTCACTAGGTGTAACATTTGGAGGAGCCGCTGGTaGTCAAGTCCCTGCAGATCC	+
Preference number: 4 (lower is better) Translates to: KENAQMGCPFIQFTRCNIWRSRW*SSPCRS Trigger: GGATCTGCAGGGACTTGATCACCAGCGGCTCCTCCA...AATGTTACACCTAGTGAATTGTATAAAAGGACAGCCCATTTGAGCATTCTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281589.5
CDS-3UTR CCA 90 bp	AAGGAGAATGCTCAAATGGGCTGTCCTTTTATACAATTCACTAGGTGTAACATTGAAGGAGGTGCTCGCTaGTTGGGCACAGCTCGTACA	+
Preference number: 4 (lower is better) Translates to: KENAQMGCPFIQFTRCNIEGGAR*LGTART Trigger: TGTACGAGCTGTGCCCAACCAGCGAGCACCTCCTTC...AATGTTACACCTAGTGAATTGTATAAAAGGACAGCCCATTTGAGCATTCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281589.5
CDS-3UTR GCA 90 bp	GGAGCTACAAGTAGTGATAAATTATATTGGGAGGAGGAGGAGGGATGGTGGGAACATCTTAAAGGAGAATaGTCAAATGGGCTGTCCTTT	+
Preference number: 4 (lower is better) Translates to: GATSSDKLYWEEEEGWWEHLKGE*SNGLSF Trigger: AAAGGACAGCCCATTTGAGCATTCTCCTTTAAGATG...TTCCCACCATCCCTCCTCCTCCTCCCAATATAATTTATCACTACTTGTAGCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281589.5
CDS-3UTR TCA 90 bp	GGAGCTACAAGTAGTGATAAATTATATTGGGAGGAGGAGGAGGGATGGTGGGAAGTGGGAAGAGGTAGATaGAACATATCCTTATTTGTT	+
Preference number: 4 (lower is better) Translates to: GATSSDKLYWEEEEGWWEVGRGR*NISLFV Trigger: AACAAATAAGGATATGTTTCATCTACCTCTTCCCAC...TTCCCACCATCCCTCCTCCTCCTCCCAATATAATTTATCACTACTTGTAGCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281589.5
CDS-3UTR CCA 90 bp	GGAGCTACAAGTAGTGATAAATTATATTGGGAGGAGGAGGAGGGATGGTGGGAAAGGAGAATGCTCAAATaGGCTGTCCTTTTATACAAT	+
Preference number: 4 (lower is better) Translates to: GATSSDKLYWEEEEGWWERRMLK*AVLLYN Trigger: ATTGTATAAAAGGACAGCCCATTTGAGCATTCTCCT...TTCCCACCATCCCTCCTCCTCCTCCCAATATAATTTATCACTACTTGTAGCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281589.5
CDS-3UTR CAA 90 bp	AAGGAGAATGCTCAAATGGGCTGTCCTTTTATACAATTCACTAGGTGTAACATTGGAGGTGCTCGCTGGTaGGGCACAGCTCGTACACTT	+
Preference number: 5 (lower is better) Translates to: KENAQMGCPFIQFTRCNIGGARW*GTARTL Trigger: AAGTGTACGAGCTGTGCCCAACCAGCGAGCACCTCC...AATGTTACACCTAGTGAATTGTATAAAAGGACAGCCCATTTGAGCATTCTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281589.5