Pregenerated sensors for PABPC1L2B (Homo sapiens)
Ensembl gene IDs: ENSG00000184388Ensembl transcript IDs: ENST00000373521.4
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCAACACACAGGAAAAGTCTTTAAAATGTCTATATGTGGATCTTaGAAGTCCGCAGTTAAGGAGACCACCGGGATGCTAGCAAAGATT | + |
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Preference number: 1 (lower is better) Translates to: WQHTGKVFKMSICGS*KSAVKETTGMLAKI Trigger: AATCTTTGCTAGCATCCCGGTGGTCTCCTTAACTGCGGACTTGCAAGATCCACATATAGACATTTTAAAGACTTTTCCTGTGTGTTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| 3UTR-3UTR CCA 90 bp | GGTAATAAACAGTGTTTGATTGCAGCAAAACCACTGAGGACAGGGAAACACCCTACACTGCTGGTGGGTTaGCGGGGGAGGGCTGGGGGT | + |
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Preference number: 2 (lower is better) Translates to: GNKQCLIAAKPLRTGKHPTLLVG*RGRAGG Trigger: ACCCCCAGCCCTCCCCCGCCAACCCACCAGCAGTGT...AGGGTGTTTCCCTGTCCTCAGTGGTTTTGCTGCAATCAAACACTGTTTATTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| 3UTR-3UTR CCA 90 bp | GGTAATAAACAGTGTTTGATTGCAGCAAAACCACTGAGGACAGGGAAACACCCTGGTCCACGGATACACTaGAGCACTCTGCAGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: GNKQCLIAAKPLRTGKHPGPRIH*STLQAL Trigger: CAGTGCCTGCAGAGTGCTCCAGTGTATCCGTGGACC...AGGGTGTTTCCCTGTCCTCAGTGGTTTTGCTGCAATCAAACACTGTTTATTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| 3UTR-3UTR CCA 90 bp | GGTAATAAACAGTGTTTGATTGCAGCAAAACCACTGAGGACAGGGAAACACCCTTGCAGCCCGCCAAGCTaGCCAAGACACACACACAAA | + |
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Preference number: 2 (lower is better) Translates to: GNKQCLIAAKPLRTGKHPCSPPS*PRHTHK Trigger: TTTGTGTGTGTGTCTTGGCCAGCTTGGCGGGCTGCA...AGGGTGTTTCCCTGTCCTCAGTGGTTTTGCTGCAATCAAACACTGTTTATTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| 3UTR-3UTR CCA 90 bp | GGTAATAAACAGTGTTTGATTGCAGCAAAACCACTGAGGACAGGGAAACACCCTAAAAGTGGTTCTCTCTaGGGAGTAGGACCAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GNKQCLIAAKPLRTGKHPKSGSL*GVGPGE Trigger: CTCCCCTGGTCCTACTCCCCAGAGAGAACCACTTTT...AGGGTGTTTCCCTGTCCTCAGTGGTTTTGCTGCAATCAAACACTGTTTATTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| 3UTR-3UTR TCA 90 bp | GGTAATAAACAGTGTTTGATTGCAGCAAAACCACTGAGGACAGGGAAACACCCTAGCAAAGATTTGGCTTaGCAAGGAAGGATTCACTCA | + |
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Preference number: 2 (lower is better) Translates to: GNKQCLIAAKPLRTGKHPSKDLA*QGRIHS Trigger: TGAGTGAATCCTTCCTTGTCAAGCCAAATCTTTGCT...AGGGTGTTTCCCTGTCCTCAGTGGTTTTGCTGCAATCAAACACTGTTTATTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| 3UTR-3UTR CCA 90 bp | ATGTTAAGGTCCACGGATACACTGGAGCACTCTGCAGGCACTGAAGATGACATTAGCCTGTTGATAACATaGAAAGAAGTTCAATGGGTT | + |
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Preference number: 2 (lower is better) Translates to: MLRSTDTLEHSAGTEDDISLLIT*KEVQWV Trigger: AACCCATTGAACTTCTTTCCATGTTATCAACAGGCT...AATGTCATCTTCAGTGCCTGCAGAGTGCTCCAGTGTATCCGTGGACCTTAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| 3UTR-3UTR CCA 90 bp | GGTAATAAACAGTGTTTGATTGCAGCAAAACCACTGAGGACAGGGAAACACCCTATGCTAGCAAAGATTTaGCTTGACAAGGAAGGATTC | + |
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Preference number: 2 (lower is better) Translates to: GNKQCLIAAKPLRTGKHPMLAKI*LDKEGF Trigger: GAATCCTTCCTTGTCAAGCCAAATCTTTGCTAGCAT...AGGGTGTTTCCCTGTCCTCAGTGGTTTTGCTGCAATCAAACACTGTTTATTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| 3UTR CCA 72 bp | GCAGTTAAGGAGACCACCGGGATGCTAGCAAAGATTTaGCTTGACAAGGAAGGATTCACTCATCAAAGCACA | + |
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Preference number: 3 (lower is better) Translates to: AVKETTGMLAKI*LDKEGFTHQST Trigger: TGTGCTTTGATGAGTGAATCCTTCCTTGTCAAGCCAAATCTTTGCTAGCATCCCGGTGGTCTCCTTAACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| 3UTR-3UTR CAA 90 bp | ATGTTAAGGTCCACGGATACACTGGAGCACTCTGCAGGCACTGAAGATGACATTGGAGCAATTACTCTCTaGTTTCTTCCCTCATCTGAT | + |
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Preference number: 3 (lower is better) Translates to: MLRSTDTLEHSAGTEDDIGAITL*FLPSSD Trigger: ATCAGATGAGGGAAGAAACAAGAGAGTAATTGCTCC...AATGTCATCTTCAGTGCCTGCAGAGTGCTCCAGTGTATCCGTGGACCTTAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| 3UTR-3UTR CAA 90 bp | GGTAATAAACAGTGTTTGATTGCAGCAAAACCACTGAGGACAGGGAAACACCCTTATGAAGGGGGCCTTTaGGCAACACACAGGAAAAGT | + |
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Preference number: 3 (lower is better) Translates to: GNKQCLIAAKPLRTGKHPYEGGL*ATHRKS Trigger: ACTTTTCCTGTGTGTTGCCAAAAGGCCCCCTTCATA...AGGGTGTTTCCCTGTCCTCAGTGGTTTTGCTGCAATCAAACACTGTTTATTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| 3UTR GCA 72 bp | ACAGGAAAAGTCTTTAAAATGTCTATATGTGGATCTTaGAAGTCCGCAGTTAAGGAGACCACCGGGATGCTA | + |
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Preference number: 3 (lower is better) Translates to: TGKVFKMSICGS*KSAVKETTGML Trigger: TAGCATCCCGGTGGTCTCCTTAACTGCGGACTTGCAAGATCCACATATAGACATTTTAAAGACTTTTCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| CDS-3UTR GCA 90 bp | ATGTTAAGGTCCACGGATACACTGGAGCACTCTGCAGGCACTGAAGATGACATTGCAGCCAGCTGCTGTTaGCGCCGCCGCTCGGTCGTG | + |
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Preference number: 4 (lower is better) Translates to: MLRSTDTLEHSAGTEDDIAASCC*RRRSVV Trigger: CACGACCGAGCGGCGGCGGCAACAGCAGCTGGCTGC...AATGTCATCTTCAGTGCCTGCAGAGTGCTCCAGTGTATCCGTGGACCTTAACAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| CDS-3UTR GCA 90 bp | ATGTTAAGGTCCACGGATACACTGGAGCACTCTGCAGGCACTGAAGATGACATTCAGCCTGCAGCCAGCTaGTGTTGCCGCCGCCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: MLRSTDTLEHSAGTEDDIQPAAS*CCRRRS Trigger: CGAGCGGCGGCGGCAACAGCAGCTGGCTGCAGGCTG...AATGTCATCTTCAGTGCCTGCAGAGTGCTCCAGTGTATCCGTGGACCTTAACAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| CDS-3UTR GCA 90 bp | ATGTTAAGGTCCACGGATACACTGGAGCACTCTGCAGGCACTGAAGATGACATTCGAGTCGCCGCAGCCTaGAGCCAGCTGCTGTTGCCG | + |
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Preference number: 4 (lower is better) Translates to: MLRSTDTLEHSAGTEDDIRVAAA*SQLLLP Trigger: CGGCAACAGCAGCTGGCTGCAGGCTGCGGCGACTCG...AATGTCATCTTCAGTGCCTGCAGAGTGCTCCAGTGTATCCGTGGACCTTAACAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| CDS-3UTR GCA 90 bp | GGTAATAAACAGTGTTTGATTGCAGCAAAACCACTGAGGACAGGGAAACACCCTCCAGGAGCGCGCCGGTaGGAGTCGCCGCAGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: GNKQCLIAAKPLRTGKHPPGARR*ESPQPA Trigger: TGCAGGCTGCGGCGACTCGCACCGGCGCGCTCCTGG...AGGGTGTTTCCCTGTCCTCAGTGGTTTTGCTGCAATCAAACACTGTTTATTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| CDS-3UTR GCA 90 bp | GGTAATAAACAGTGTTTGATTGCAGCAAAACCACTGAGGACAGGGAAACACCCTGGTCTCATCCGCATCTaGATCCGCGGCGGCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: GNKQCLIAAKPLRTGKHPGLIRI*IRGGRR Trigger: GCGGCGGCCGCCGCGGATGCAGATGCGGATGAGACC...AGGGTGTTTCCCTGTCCTCAGTGGTTTTGCTGCAATCAAACACTGTTTATTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| CDS-3UTR GCA 90 bp | GGTAATAAACAGTGTTTGATTGCAGCAAAACCACTGAGGACAGGGAAACACCCTAGGAGGGCGGGTGGGTaGGGGAACACAGACCCGATG | + |
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Preference number: 4 (lower is better) Translates to: GNKQCLIAAKPLRTGKHPRRAGG*GNTDPM Trigger: CATCGGGTCTGTGTTCCCGCACCCACCCGCCCTCCT...AGGGTGTTTCCCTGTCCTCAGTGGTTTTGCTGCAATCAAACACTGTTTATTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| CDS-3UTR CCA 90 bp | ATGTTAAGGTCCACGGATACACTGGAGCACTCTGCAGGCACTGAAGATGACATTGGTCCACGGATACACTaGAGCACTCTGCAGGCACTG | + |
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Preference number: 4 (lower is better) Translates to: MLRSTDTLEHSAGTEDDIGPRIH*STLQAL Trigger: CAGTGCCTGCAGAGTGCTCCAGTGTATCCGTGGACC...AATGTCATCTTCAGTGCCTGCAGAGTGCTCCAGTGTATCCGTGGACCTTAACAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| CDS-3UTR GCA 90 bp | ATGTTAAGGTCCACGGATACACTGGAGCACTCTGCAGGCACTGAAGATGACATTGTGACCAGGAGGCTATaGAGGGGAAACGGGCATACT | + |
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Preference number: 4 (lower is better) Translates to: MLRSTDTLEHSAGTEDDIVTRRL*RGNGHT Trigger: AGTATGCCCGTTTCCCCTGCATAGCCTCCTGGTCAC...AATGTCATCTTCAGTGCCTGCAGAGTGCTCCAGTGTATCCGTGGACCTTAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| CDS-3UTR CCA 90 bp | ATGTTAAGGTCCACGGATACACTGGAGCACTCTGCAGGCACTGAAGATGACATTTGCAGCCCGCCAAGCTaGCCAAGACACACACACAAA | + |
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Preference number: 4 (lower is better) Translates to: MLRSTDTLEHSAGTEDDICSPPS*PRHTHK Trigger: TTTGTGTGTGTGTCTTGGCCAGCTTGGCGGGCTGCA...AATGTCATCTTCAGTGCCTGCAGAGTGCTCCAGTGTATCCGTGGACCTTAACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| 3UTR CAA 72 bp | GAAGGATTCACTCATCAAAGCACAGAGCACGCAATGTaGGTCTTAAACACAGGGAAAGAACTAGGCACCACC | + |
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Preference number: 4 (lower is better) Translates to: EGFTHQSTEHAM*VLNTGKELGTT Trigger: GGTGGTGCCTAGTTCTTTCCCTGTGTTTAAGACCAACATTGCGTGCTCTGTGCTTTGATGAGTGAATCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| CDS-3UTR TCA 90 bp | GGTAATAAACAGTGTTTGATTGCAGCAAAACCACTGAGGACAGGGAAACACCCTAATGTTTGTGCACTGTaGTCTTGTTGGCAGCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: GNKQCLIAAKPLRTGKHPNVCAL*SCWQLW Trigger: CCAAAGCTGCCAACAAGATCACAGTGCACAAACATT...AGGGTGTTTCCCTGTCCTCAGTGGTTTTGCTGCAATCAAACACTGTTTATTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| CDS-3UTR CCA 90 bp | ATGTTAAGGTCCACGGATACACTGGAGCACTCTGCAGGCACTGAAGATGACATTATGCTAGCAAAGATTTaGCTTGACAAGGAAGGATTC | + |
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Preference number: 4 (lower is better) Translates to: MLRSTDTLEHSAGTEDDIMLAKI*LDKEGF Trigger: GAATCCTTCCTTGTCAAGCCAAATCTTTGCTAGCAT...AATGTCATCTTCAGTGCCTGCAGAGTGCTCCAGTGTATCCGTGGACCTTAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| CDS-3UTR TCA 90 bp | ATGTTAAGGTCCACGGATACACTGGAGCACTCTGCAGGCACTGAAGATGACATTCATAAGAAAACAAAATaGAACAACCCAGACGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: MLRSTDTLEHSAGTEDDIHKKTK*NNPDVQ Trigger: TTGGACGTCTGGGTTGTTTCATTTTGTTTTCTTATG...AATGTCATCTTCAGTGCCTGCAGAGTGCTCCAGTGTATCCGTGGACCTTAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| CDS-3UTR GCA 90 bp | ATGTTAAGGTCCACGGATACACTGGAGCACTCTGCAGGCACTGAAGATGACATTTTGGCAGCTTTGGCTTaGATAAGAAAACAAAATGAA | + |
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Preference number: 4 (lower is better) Translates to: MLRSTDTLEHSAGTEDDILAALA*IRKQNE Trigger: TTCATTTTGTTTTCTTATGCAAGCCAAAGCTGCCAA...AATGTCATCTTCAGTGCCTGCAGAGTGCTCCAGTGTATCCGTGGACCTTAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| CDS-3UTR GCA 90 bp | GGTAATAAACAGTGTTTGATTGCAGCAAAACCACTGAGGACAGGGAAACACCCTCTGAATGTCCAACAATaGGGGAATGATTACAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: GNKQCLIAAKPLRTGKHPLNVQQ*GNDYRN Trigger: ATTTCTGTAATCATTCCCGCATTGTTGGACATTCAG...AGGGTGTTTCCCTGTCCTCAGTGGTTTTGCTGCAATCAAACACTGTTTATTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| CDS-3UTR CCA 90 bp | GGTAATAAACAGTGTTTGATTGCAGCAAAACCACTGAGGACAGGGAAACACCCTAGCCTGTTGATAACATaGAAAGAAGTTCAATGGGTT | + |
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Preference number: 4 (lower is better) Translates to: GNKQCLIAAKPLRTGKHPSLLIT*KEVQWV Trigger: AACCCATTGAACTTCTTTCCATGTTATCAACAGGCT...AGGGTGTTTCCCTGTCCTCAGTGGTTTTGCTGCAATCAAACACTGTTTATTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| CDS-3UTR CAA 90 bp | GGTAATAAACAGTGTTTGATTGCAGCAAAACCACTGAGGACAGGGAAACACCCTTGCAGCCAGCTGCTGTaGCCGCCGCCGCTCGGTCGT | + |
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Preference number: 5 (lower is better) Translates to: GNKQCLIAAKPLRTGKHPCSQLL*PPPLGR Trigger: ACGACCGAGCGGCGGCGGCAACAGCAGCTGGCTGCA...AGGGTGTTTCCCTGTCCTCAGTGGTTTTGCTGCAATCAAACACTGTTTATTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| CDS-3UTR CAA 90 bp | ATGTTAAGGTCCACGGATACACTGGAGCACTCTGCAGGCACTGAAGATGACATTTATGAAGGGGGCCTTTaGGCAACACACAGGAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: MLRSTDTLEHSAGTEDDIYEGGL*ATHRKS Trigger: ACTTTTCCTGTGTGTTGCCAAAAGGCCCCCTTCATA...AATGTCATCTTCAGTGCCTGCAGAGTGCTCCAGTGTATCCGTGGACCTTAACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| CDS-3UTR CAA 90 bp | ATGTTAAGGTCCACGGATACACTGGAGCACTCTGCAGGCACTGAAGATGACATTTGCACTGTGATCTTGTaGGCAGCTTTGGCTTGCATA | + |
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Preference number: 5 (lower is better) Translates to: MLRSTDTLEHSAGTEDDICTVIL*AALACI Trigger: TATGCAAGCCAAAGCTGCCAACAAGATCACAGTGCA...AATGTCATCTTCAGTGCCTGCAGAGTGCTCCAGTGTATCCGTGGACCTTAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| CDS-3UTR CAA 90 bp | GGTAATAAACAGTGTTTGATTGCAGCAAAACCACTGAGGACAGGGAAACACCCTGGTAATAAACAGTGTTaGATTGCAGCAAAACCACTG | + |
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Preference number: 5 (lower is better) Translates to: GNKQCLIAAKPLRTGKHPGNKQC*IAAKPL Trigger: CAGTGGTTTTGCTGCAATCAAACACTGTTTATTACC...AGGGTGTTTCCCTGTCCTCAGTGGTTTTGCTGCAATCAAACACTGTTTATTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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| CDS-3UTR CAA 90 bp | GGTAATAAACAGTGTTTGATTGCAGCAAAACCACTGAGGACAGGGAAACACCCTATCTTGTTGGCAGCTTaGGCTTGCATAAGAAAACAA | + |
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Preference number: 5 (lower is better) Translates to: GNKQCLIAAKPLRTGKHPILLAA*ACIRKQ Trigger: TTGTTTTCTTATGCAAGCCAAAGCTGCCAACAAGAT...AGGGTGTTTCCCTGTCCTCAGTGGTTTTGCTGCAATCAAACACTGTTTATTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373521.4 |
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