RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PABPC1L (Homo sapiens)

Ensembl gene IDs: ENSG00000101104

Ensembl transcript IDs: ENST00000217073.7, ENST00000217074.9, ENST00000217075.7, ENST00000255136.8, ENST00000372819.5, ENST00000372822.2, ENST00000372824.5, ENST00000372826.6, ENST00000465761.1, ENST00000476056.6, ENST00000479873.5, ENST00000482486.1, ENST00000490798.6, ENST00000537323.5, ENST00000674244.1, ENST00000674318.1

Found 793 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGCCCAGGAGGGGGTTGCTCAGGGTCCGCATGGTGGAGAGGCGCTaGATGTACTGGTTGGTCAAGATGGCCTTCCGCTCCTCTTTGCGC +
Preference number: 1 (lower is better)
Translates to: EPRRGLLRVRMVERR*MYWLVKMAFRSSLR
Trigger: GCGCAAAGAGGAGCGGAAGGCCATCTTGACCAACCAGTACATGCAGCGCCTCTCCACCATGCGGACCCTGAGCAACCCCCTCCTGGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
3UTR GCA 90 bp GCAGGAAGTAGCTGGAGGGCTGCTGAAAGGAGCCCAGGAGGGGGTTaGTCAGGGTCCGCATGGTGGAGAGGCGCTGCATGTACTGGTTGG +
Preference number: 1 (lower is better)
Translates to: AGSSWRAAERSPGGG*SGSAWWRGAACTGW
Trigger: CCAACCAGTACATGCAGCGCCTCTCCACCATGCGGACCCTGAGCAACCCCCTCCTGGGCTCCTTTCAGCAGCCCTCCAGCTACTTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
3UTR GCA 90 bp CCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTaGACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCAC +
Preference number: 1 (lower is better)
Translates to: PAPGPDRCYVLLRNI*TAGAAGLVYSILPH
Trigger: GTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
3UTR TCA 90 bp GCACAGCCGGCTCCTGGACCTTACCCGATAGGTGCTATGTGCTGCTaGGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCA +
Preference number: 1 (lower is better)
Translates to: AQPAPGPYPIGAMCC*GTFARQERPAWCTA
Trigger: TGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTAAGGTCCAGGAGCCGGCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476056.6
3UTR GCA 90 bp CTTTGCGCTGGGCCAGTGCCACGTAGAGTGGCTTGGTGCCCACGATaGGCCCGTTCATCTCTGTCACGGCCTTTGTCGCCTCTTCTTCGC +
Preference number: 1 (lower is better)
Translates to: LCAGPVPRRVAWCPR*ARSSLSRPLSPLLR
Trigger: GCGAAGAAGAGGCGACAAAGGCCGTGACAGAGATGAACGGGCGCATCGTGGGCACCAAGCCACTCTACGTGGCACTGGCCCAGCGCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217074.9
3UTR CCA 90 bp GCTGCTGAAAGGAGCCCAGGAGGGGGTTGCTCAGGGTCCGCATGGTaGAGAGGCGCTGCATGTACTGGTTGGTCAAGATGGCCTTCCGCT +
Preference number: 1 (lower is better)
Translates to: AAERSPGGGCSGSAW*RGAACTGWSRWPSA
Trigger: AGCGGAAGGCCATCTTGACCAACCAGTACATGCAGCGCCTCTCCACCATGCGGACCCTGAGCAACCCCCTCCTGGGCTCCTTTCAGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
3UTR CCA 90 bp AGGGCTGCTGAAAGGAGCCCAGGAGGGGGTTGCTCAGGGTCCGCATaGTGGAGAGGCGCTGCATGTACTGGTTGGTCAAGATGGCCTTCC +
Preference number: 1 (lower is better)
Translates to: RAAERSPGGGCSGSA*WRGAACTGWSRWPS
Trigger: GGAAGGCCATCTTGACCAACCAGTACATGCAGCGCCTCTCCACCATGCGGACCCTGAGCAACCCCCTCCTGGGCTCCTTTCAGCAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
3UTR GCA 90 bp ACTTTCCGTCTCTGGGCCTGGTTTCAGTGCATGTACGCCTTCGGCTaGTCCATAGCCTGGTGTGCCTGCAGCACGGCCACTGCCTCGTCT +
Preference number: 1 (lower is better)
Translates to: TFRLWAWFQCMYAFG*SIAWCACSTATASS
Trigger: AGACGAGGCAGTGGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGGCCCAGAGACGGAAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674318.1
3UTR CCA 90 bp TGGGCCTGGTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTaGTGTGCCTGCAGCACGGCCACTGCCTCGTCTATCTTGGCATGG +
Preference number: 1 (lower is better)
Translates to: WAWFQCMYAFGCSIA*CACSTATASSILAW
Trigger: CCATGCCAAGATAGACGAGGCAGTGGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674318.1
3UTR GCA 90 bp CTGGTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTaGCTGCAGCACGGCCACTGCCTCGTCTATCTTGGCATGGAGGGA +
Preference number: 1 (lower is better)
Translates to: LVSVHVRLRLLHSLV*LQHGHCLVYLGMEG
Trigger: TCCCTCCATGCCAAGATAGACGAGGCAGTGGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674318.1
3UTR GCA 90 bp TCCTGGACCTTACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTaGACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCAC +
Preference number: 1 (lower is better)
Translates to: SWTLPDRCYVLLRNI*TAGAAGLVYSILPH
Trigger: GTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTAAGGTCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476056.6
3UTR CCA 90 bp TGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTaGGTCCTGTGGTCTGAGTACCAATGTTGGATGAGGTACCAAGCA +
Preference number: 1 (lower is better)
Translates to: CTAGAAGLVYSILPH*VLWSEYQCWMRYQA
Trigger: TGCTTGGTACCTCATCCAACATTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000674244.1
ENST00000674318.1
3UTR CCA 90 bp TGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTaGGTCCTGTGGTCTGAGTACCAATGTTGGCTACTCTCTGGGTAT +
Preference number: 1 (lower is better)
Translates to: CTAGAAGLVYSILPH*VLWSEYQCWLLSGY
Trigger: ATACCCAGAGAGTAGCCAACATTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537323.5
3UTR GCA 90 bp TTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCTaGAGCACGGCCACTGCCTCGTCTATCTTGGCATGGAGGGATTCT +
Preference number: 1 (lower is better)
Translates to: FQCMYAFGCSIAWCA*STATASSILAWRDS
Trigger: AGAATCCCTCCATGCCAAGATAGACGAGGCAGTGGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674318.1
3UTR GCA 90 bp AGCGAGGATTTCCTTTTCTGGTTTCAGTGCATGTACGCCTTCGGCTaGTCCATAGCCTGGTGTGCCTGCAGCACGGCCACTGCCTCGTCT +
Preference number: 1 (lower is better)
Translates to: SEDFLFWFQCMYAFG*SIAWCACSTATASS
Trigger: AGACGAGGCAGTGGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGAAAAGGAAATCCTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
3UTR CCA 90 bp GGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTaGTCTGAGTACCAATGTTGGATGAGGTACCAAGCAAGAACAGTC +
Preference number: 1 (lower is better)
Translates to: GAAGLVYSILPHWVL*SEYQCWMRYQARTV
Trigger: GACTGTTCTTGCTTGGTACCTCATCCAACATTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000674244.1
ENST00000674318.1
3UTR CCA 90 bp CTTTTCTGGTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTaGTGTGCCTGCAGCACGGCCACTGCCTCGTCTATCTTGGCATGG +
Preference number: 1 (lower is better)
Translates to: LFWFQCMYAFGCSIA*CACSTATASSILAW
Trigger: CCATGCCAAGATAGACGAGGCAGTGGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
3UTR TCA 90 bp ATATCCTCATGTGGTAGGTGGGCACGCATGATCAGAGGGATGGAGTaGCTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCAC +
Preference number: 1 (lower is better)
Translates to: ISSCGRWARMIRGME*LVRIAGLMPFPPHH
Trigger: GTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCTCTGATCATGCGTGCCCACCTACCACATGAGGATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
3UTR TCA 90 bp GGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTaGGTACCAATGTTGGATGAGGTACCAAGCAAGAACAGTCAAATT +
Preference number: 1 (lower is better)
Translates to: GRPGVQHPTPLGPVV*VPMLDEVPSKNSQI
Trigger: AATTTGACTGTTCTTGCTTGGTACCTCATCCAACATTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000674244.1
3UTR GCA 90 bp TATTTTACTAGTCTTTGTACTTTCCGTCTCTGGGCCTGGTTTCAGTaGATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCTGCAGC +
Preference number: 1 (lower is better)
Translates to: YFTSLCTFRLWAWFQ*MYAFGCSIAWCACS
Trigger: GCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGGCCCAGAGACGGAAAGTACAAAGACTAGTAAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674318.1
3UTR CCA 90 bp GCAAGGATGTATTTTACTAGTCTTTGTACTTTCCGTCTCTGGGCCTaGTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGT +
Preference number: 1 (lower is better)
Translates to: ARMYFTSLCTFRLWA*FQCMYAFGCSIAWC
Trigger: ACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGGCCCAGAGACGGAAAGTACAAAGACTAGTAAAATACATCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674318.1
3UTR CCA 90 bp TTAAGGGCAAGGATGTATTTTACTAGTCTTTGTACTTTCCGTCTCTaGGCCTGGTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCC +
Preference number: 1 (lower is better)
Translates to: LRARMYFTSLCTFRL*AWFQCMYAFGCSIA
Trigger: GGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGGCCCAGAGACGGAAAGTACAAAGACTAGTAAAATACATCCTTGCCCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674318.1
3UTR CCA 90 bp TGTACATTTGTATGGGTTAATTCTGGGTCCATAGAAAAGCTAGCCTaGTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGC +
Preference number: 1 (lower is better)
Translates to: CTFVWVNSGSIEKLA*YLDLARTGVWFCCC
Trigger: GCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATACCAGGCTAGCTTTTCTATGGACCCAGAATTAACCCATACAAATGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
3UTR-3UTR TCA 90 bp GGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTTGGTGGCCGGACCATTaGGGCACCTGGAGGGTAGGC +
Preference number: 2 (lower is better)
Translates to: GTFARQERPAWCTASYPTWWPDH*GTWRVG
Trigger: GCCTACCCTCCAGGTGCCTCAATGGTCCGGCCACCA...AGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000674244.1
3UTR-3UTR TCA 90 bp GTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCTGCAGCACGGCCACGCTACTCTCTGGGTATaGGGCACCGTGCGTGGCACC +
Preference number: 2 (lower is better)
Translates to: VHVRLRLLHSLVCLQHGHATLWV*GTVRGT
Trigger: GGTGCCACGCACGGTGCCTCATACCCAGAGAGTAGC...GTGGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
3UTR-3UTR CCA 90 bp GCTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCAGGAGCGGCCGGCCTaGTGTACAGCATCCTACCCC +
Preference number: 2 (lower is better)
Translates to: APVLGCAQPAPGPDRCYVQERPA*CTASYP
Trigger: GGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTG...CACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
3UTR-3UTR TCA 90 bp GGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGCTACTCTCTGGGTATaGGGCACCGTGCGTGGCACC +
Preference number: 2 (lower is better)
Translates to: GTFARQERPAWCTASYPTATLWV*GTVRGT
Trigger: GGTGCCACGCACGGTGCCTCATACCCAGAGAGTAGC...AGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000537323.5
ENST00000674244.1
3UTR-3UTR CCA 90 bp GCTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCCACGTAGAGTGGCTTaGTGCCCACGATGCGCCCGT +
Preference number: 2 (lower is better)
Translates to: APVLGCAQPAPGPDRCYVPRRVA*CPRCAR
Trigger: ACGGGCGCATCGTGGGCACCAAGCCACTCTACGTGG...CACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
3UTR-3UTR CCA 90 bp TGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACACCGTGCGTGGCACCTaGGTGGAGGCCTGCCTGACA +
Preference number: 2 (lower is better)
Translates to: CYVLLRNICTAGAAGLVYTVRGT*VEACLT
Trigger: TGTCAGGCAGGCCTCCACCCAGGTGCCACGCACGGT...GTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000537323.5
ENST00000674244.1
3UTR-3UTR CCA 90 bp GCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTCAGTGCCACGTAGAGTaGCTTGGTGCCCACGATGCG +
Preference number: 2 (lower is better)
Translates to: AAEEHLHGRSGRPGVQHPQCHVE*LGAHDA
Trigger: CGCATCGTGGGCACCAAGCCACTCTACGTGGCACTG...AGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
3UTR-3UTR CCA 90 bp GAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGTGCACAGCCGGCTCCTaGACCTTACCCGATAGGTGC +
Preference number: 2 (lower is better)
Translates to: EHLHGRSGRPGVQHPTPLCTAGS*TLPDRC
Trigger: GCACCTATCGGGTAAGGTCCAGGAGCCGGCTGTGCA...CAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476056.6
3UTR-3UTR GCA 90 bp GCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTTTTGCGCTGGGCCAGTaGCACGTAGAGTGGCTTGGT +
Preference number: 2 (lower is better)
Translates to: AAEEHLHGRSGRPGVQHPFALGQ*HVEWLG
Trigger: ACCAAGCCACTCTACGTGGCACTGGCCCAGCGCAAA...AGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
3UTR-3UTR GCA 90 bp AGCATGCCCGTGATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGCTGCTGAGGAACATTTaGACGGCAGGAGCGGCCGGC +
Preference number: 2 (lower is better)
Translates to: SMPVILPASWVWTSWIRGLLRNI*TAGAAG
Trigger: GCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAG...CCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATCACGGGCATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
3UTR-3UTR TCA 90 bp CTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGATCAGAGGGATGGAGTaGCTTGTCCGGATCGCAGGG +
Preference number: 2 (lower is better)
Translates to: LCAAEEHLHGRSGRPGVQIRGME*LVRIAG
Trigger: CCCTGCGATCCGGACAAGTCACTCCATCCCTCTGAT...CTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490798.6
ENST00000674318.1
3UTR-3UTR GCA 90 bp GCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTCGCTTCAGTTCATTCTaGCGCTCCACGCGCTTTTGG +
Preference number: 2 (lower is better)
Translates to: AAEEHLHGRSGRPGVQHPRFSSF*RSTRFW
Trigger: CCAAAAGCGCGTGGAGCGGCAGAATGAACTGAAGCG...AGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217074.9
3UTR-3UTR GCA 90 bp GCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGAGTACCAACGCCTCAGCCGGTCCTaGTTCATCTGCTCAAACCTG +
Preference number: 2 (lower is better)
Translates to: AGLVYSILPHWVLWSEYQRLSRS*FICSNL
Trigger: CAGGTTTGAGCAGATGAAGCAGGACCGGCTGAGGCG...TTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217074.9
3UTR-3UTR CCA 90 bp AGCATGCCCGTGATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTGCTCAGGGTCCGCATaGTGGAGAGGCGCTGCATGT +
Preference number: 2 (lower is better)
Translates to: SMPVILPASWVWTSWIRGCSGSA*WRGAAC
Trigger: ACATGCAGCGCCTCTCCACCATGCGGACCCTGAGCA...CCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATCACGGGCATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
3UTR-3UTR CCA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCCAGGAGCGGCCGGCCTaGTGTACAGCATCCTACCCC +
Preference number: 2 (lower is better)
Translates to: RVCRALGLRARNTVLLAAQERPA*CTASYP
Trigger: GGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTG...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
3UTR-3UTR TCA 90 bp AGGGTTGATGCCCTTTCCACCGCACCACTGCTGTTTCTGAGCAACCGTACTCTGTCCGGATCGCAGGGTTaGTGCCCTTTCCACCGCACC +
Preference number: 2 (lower is better)
Translates to: RVDALSTAPLLFLSNRTLSGSQG*CPFHRT
Trigger: GGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGA...CAGAGTACGGTTGCTCAGAAACAGCAGTGGTGCGGTGGAAAGGGCATCAACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
3UTR-3UTR TCA 90 bp AGGGATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCAATCAGAGGGATGGAGTaGCTTGTCCGGATCGCAGGG +
Preference number: 2 (lower is better)
Translates to: RDGVTCPDRRVDALSTAPIRGME*LVRIAG
Trigger: CCCTGCGATCCGGACAAGTCACTCCATCCCTCTGAT...TGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
3UTR-3UTR CCA 90 bp CACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCAGTGCCGCTCCACGCGCTTTTaGGCCCGGCCCGCGTACAGC +
Preference number: 2 (lower is better)
Translates to: HCPFGSHGSEDFLFWFQCRSTRF*ARPAYS
Trigger: GCTGTACGCGGGCCGGGCCCAAAAGCGCGTGGAGCG...GCACTGAAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000217074.9
3UTR-3UTR CCA 90 bp TATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCCCCCACTGGGTCCTGTaGTCTGAGTACCAATGTTGG +
Preference number: 2 (lower is better)
Translates to: YVLLRNICTAGAAGLVYSPHWVL*SEYQCW
Trigger: CCAACATTGGTACTCAGACCACAGGACCCAGTGGGG...GCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
3UTR-3UTR TCA 90 bp GATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGCTCGGTGCTATGTGCTGCTaGGGAACATTTGCACGGCAG +
Preference number: 2 (lower is better)
Translates to: DLASQLGVDIMDKGVETLGAMCC*GTFARQ
Trigger: CTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACC...GAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
3UTR-3UTR GCA 90 bp GTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCTGCAGCACTCAATCATCTGCTTTTaGTCATGCAGGGGCGCCGCA +
Preference number: 2 (lower is better)
Translates to: VSVHVRLRLLHSLVCLQHSIICF*SCRGAA
Trigger: TGCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGA...GTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476056.6
3UTR-3UTR GCA 90 bp GCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACACCTTCAATCATCTaGTTTTGCTCATGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: AAEEHLHGRSGRPGVQHPTPSII*FCSCRG
Trigger: GCCCCTGCATGAGCAAAAGCAGATGATTGAAGGTGT...AGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476056.6
3UTR-3UTR GCA 90 bp CCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCATCTGGGCCAATCATCTaGTTTTGCTCATGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: PAPGPDRCYVLLRNICTASGPII*FCSCRG
Trigger: GCCCCTGCATGAGCAAAAGCAGATGATTGGCCCAGA...TGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490798.6
3UTR-3UTR CCA 90 bp CCTTTTCTGGTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCAGGCAGGAAGTAGCTaGAGGGCTGCTGAAAGGAGC +
Preference number: 2 (lower is better)
Translates to: PFLVSVHVRLRLLHSLVCQAGSS*RAAERS
Trigger: GCTCCTTTCAGCAGCCCTCCAGCTACTTCCTGCCTG...GCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
3UTR-3UTR TCA 90 bp GCTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGAACAGGCTAACACAATaGACCCTTCCAGCAAGTCTA +
Preference number: 2 (lower is better)
Translates to: APVLGCAQPAPGPDRCYVNRLTQ*TLPASL
Trigger: TAGACTTGCTGGAAGGGTTCATTGTGTTAGCCTGTT...CACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490798.6
ENST00000674318.1
3UTR-3UTR TCA 90 bp CCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCAGCAACCGTACTCTGGTaGCTCAAGATGGATTACAGG +
Preference number: 2 (lower is better)
Translates to: PAPGPDRCYVLLRNICTAATVLW*LKMDYR
Trigger: CCTGTAATCCATCTTGAGTCACCAGAGTACGGTTGC...TGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490798.6
ENST00000674318.1
3UTR-3UTR TCA 90 bp CTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGCTACAGATTTCCTAGGTCCGGATCGCAGGGTTaGTGCCCTTTCCACCGCACC +
Preference number: 2 (lower is better)
Translates to: LDLARTGVWFCCCYRFPRSGSQG*CPFHRT
Trigger: GGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGA...CCTAGGAAATCTGTAGCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
3UTR-3UTR TCA 90 bp GCCCGTGATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGTCTGATCAGTCTTCTTaGTCACGAAGAGAGCTCAGG +
Preference number: 2 (lower is better)
Translates to: ARDLASQLGVDIMDKGVESDQSS*SRRELR
Trigger: CCTGAGCTCTCTTCGTGATCAAGAAGACTGATCAGA...CTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATCACGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674318.1
3UTR-3UTR TCA 90 bp TGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACGTGGCCTTTAATGGGTaGCATCTTTCTACTTCCTGT +
Preference number: 2 (lower is better)
Translates to: CYVLLRNICTAGAAGLVYVAFNG*HLSTSC
Trigger: ACAGGAAGTAGAAAGATGTCACCCATTAAAGGCCAC...GTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674244.1
3UTR-3UTR GCA 90 bp AGGGATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCAACCGGAGTTTGGTTCTaGTGCTGCTACAGATTTCCT +
Preference number: 2 (lower is better)
Translates to: RDGVTCPDRRVDALSTAPTGVWF*CCYRFP
Trigger: AGGAAATCTGTAGCAGCAGCAGAACCAAACTCCGGT...TGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
3UTR-3UTR CCA 90 bp CAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTACCGTGCGTGGCACCTaGGTGGAGGCCTGCCTGACA +
Preference number: 2 (lower is better)
Translates to: QKHCPFGSHGSEDFLFWFTVRGT*VEACLT
Trigger: TGTCAGGCAGGCCTCCACCCAGGTGCCACGCACGGT...AAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
3UTR-3UTR TCA 90 bp TGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGCTGTTTCTGAGCCTTCCAGCAAGTCTATaGAGTGATATCCTCATGTGG +
Preference number: 2 (lower is better)
Translates to: CPDRRVDALSTAPLLFLSLPASL*SDILMW
Trigger: CCACATGAGGATATCACTTCATAGACTTGCTGGAAG...GCTCAGAAACAGCAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
3UTR-3UTR GCA 90 bp CAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCCTTCCGCTCCTCTTTaGGCTGGGCCAGTGCCACGT +
Preference number: 2 (lower is better)
Translates to: QKHCPFGSHGSEDFLFWFPSAPL*AGPVPR
Trigger: ACGTGGCACTGGCCCAGCGCAAAGAGGAGCGGAAGG...AAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
3UTR-3UTR CCA 90 bp AGCAAGAACAGTCAAATTCACAGAGACAAAGTAGAATGGCAGTTGCCAAGGGCTATGAGGCACCGTGCGTaGCACCTGGGTGGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: SKNSQIHRDKVEWQLPRAMRHRA*HLGGGL
Trigger: CAGGCCTCCACCCAGGTGCCACGCACGGTGCCTCAT...AGCCCTTGGCAACTGCCATTCTACTTTGTCTCTGTGAATTTGACTGTTCTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000674244.1
3UTR-3UTR TCA 90 bp TGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGCTGTTTCTGAGCAGCAAGTCTATGAAGTaGTATCCTCATGTGGTAGGT +
Preference number: 2 (lower is better)
Translates to: CPDRRVDALSTAPLLFLSSKSMK*YPHVVG
Trigger: ACCTACCACATGAGGATATCACTTCATAGACTTGCT...GCTCAGAAACAGCAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
3UTR-3UTR CCA 90 bp CCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCAGTTTGTCGTCATCAATaGAGTCGTCCAGATTCTTCA +
Preference number: 2 (lower is better)
Translates to: PAPGPDRCYVLLRNICTAVCRHQ*SRPDSS
Trigger: TGAAGAATCTGGACGACTCCATTGATGACGACAAAC...TGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217074.9
3UTR CAA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTaGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCAGTGCA +
Preference number: 2 (lower is better)
Translates to: RVCRALGLRARNTVL*AAMEARISFSGFSA
Trigger: TGCACTGAAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
3UTR-3UTR GCA 90 bp TTCCTTTTCTGGTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTACCTTACCCGATAGGTaGTATGTGCTGCTGAGGAAC +
Preference number: 2 (lower is better)
Translates to: FLFWFQCMYAFGCSIAWCTLPDR*YVLLRN
Trigger: GTTCCTCAGCAGCACATAGCACCTATCGGGTAAGGT...ACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGAAAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476056.6
3UTR-3UTR CCA 90 bp TGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTCAGGGGCTCCTGTCCTaGGATGTGCACAGCCGGCTC +
Preference number: 2 (lower is better)
Translates to: WVTNLHSHTEPKYRYRLIQGLLS*DVHSRL
Trigger: GAGCCGGCTGTGCACATCCCAGGACAGGAGCCCCTG...AATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
3UTR-3UTR CCA 90 bp TGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGCTGTTTCTGAGCATGGATTACAGGTTTTaGGTACTTAGCTCCTTAAGG +
Preference number: 2 (lower is better)
Translates to: CPDRRVDALSTAPLLFLSMDYRF*VLSSLR
Trigger: CCTTAAGGAGCTAAGTACCCAAAACCTGTAATCCAT...GCTCAGAAACAGCAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490798.6
ENST00000674318.1
3UTR-3UTR CCA 90 bp GTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGCTGTTTTCTGGTGACTCAAGATaGATTACAGGTTTTGGGTAC +
Preference number: 2 (lower is better)
Translates to: VTCPDRRVDALSTAPLLFSGDSR*ITGFGY
Trigger: GTACCCAAAACCTGTAATCCATCTTGAGTCACCAGA...AAACAGCAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490798.6
ENST00000674318.1
3UTR-3UTR CCA 90 bp CACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCAGTGCATCTTGCCAGCCAGCTaGGTGTGGACATCATGGATA +
Preference number: 2 (lower is better)
Translates to: HCPFGSHGSEDFLFWFQCILPAS*VWTSWI
Trigger: TATCCATGATGTCCACACCCAGCTGGCTGGCAAGAT...GCACTGAAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
3UTR-3UTR TCA 90 bp AAGCTAGCCTGGTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGCTCTGATCAGTCTTCTTaGTCACGAAGAGAGCTCAGG +
Preference number: 2 (lower is better)
Translates to: KLAWYLDLARTGVWFCCCSDQSS*SRRELR
Trigger: CCTGAGCTCTCTTCGTGATCAAGAAGACTGATCAGA...GCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATACCAGGCTAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
3UTR-3UTR CCA 90 bp GAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCAAGGCGCTGCATGTACTaGTTGGTCAAGATGGCCTTC +
Preference number: 2 (lower is better)
Translates to: ETLSFWQPWKRGFPFLVSRRCMY*LVKMAF
Trigger: GAAGGCCATCTTGACCAACCAGTACATGCAGCGCCT...TGAAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
3UTR-3UTR CCA 90 bp GTCTTTGTACTTTCCGTCTCTGGGCCTGGTTTCAGTGCATGTACGCCTTCGGCTATGGATTACAGGTTTTaGGTACTTAGCTCCTTAAGG +
Preference number: 2 (lower is better)
Translates to: VFVLSVSGPGFSACTPSAMDYRF*VLSSLR
Trigger: CCTTAAGGAGCTAAGTACCCAAAACCTGTAATCCAT...AGCCGAAGGCGTACATGCACTGAAACCAGGCCCAGAGACGGAAAGTACAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674318.1
3UTR-3UTR GCA 90 bp AGAAAAGCTAGCCTGGTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGACCGGAGTTTGGTTCTaGTGCTGCTACAGATTTCCT +
Preference number: 2 (lower is better)
Translates to: RKASLVSRFSKDRSLVLLTGVWF*CCYRFP
Trigger: AGGAAATCTGTAGCAGCAGCAGAACCAAACTCCGGT...CAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATACCAGGCTAGCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
3UTR-3UTR CCA 90 bp AAAGCTAGCCTGGTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGTCTGGTGACTCAAGATaGATTACAGGTTTTGGGTAC +
Preference number: 2 (lower is better)
Translates to: KASLVSRFSKDRSLVLLLSGDSR*ITGFGY
Trigger: GTACCCAAAACCTGTAATCCATCTTGAGTCACCAGA...CAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATACCAGGCTAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674318.1
3UTR-3UTR TCA 90 bp TGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTAATAGGCTGGATGGGTaGCCAACCTTCATTCACATA +
Preference number: 2 (lower is better)
Translates to: WVTNLHSHTEPKYRYRLINRLDG*PTFIHI
Trigger: TATGTGAATGAAGGTTGGTCACCCATCCAGCCTATT...AATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000372822.2
ENST00000476056.6
ENST00000537323.5
3UTR CCA 72 bp CTGCGCTTCAGTTCATTCTGCCGCTCCACGCGCTTTTaGGCCCGGCCCGCGTACAGCAGCCGCCCGCTCACC +
Preference number: 3 (lower is better)
Translates to: LRFSSFCRSTRF*ARPAYSSRPLT
Trigger: GGTGAGCGGGCGGCTGCTGTACGCGGGCCGGGCCCAAAAGCGCGTGGAGCGGCAGAATGAACTGAAGCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217074.9
3UTR-3UTR CAA 90 bp CCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCACCGCTCCACGCGCTTTaGGGCCCGGCCCGCGTACAG +
Preference number: 3 (lower is better)
Translates to: PAPGPDRCYVLLRNICTAPLHAL*GPARVQ
Trigger: CTGTACGCGGGCCGGGCCCAAAAGCGCGTGGAGCGG...TGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217074.9
3UTR TCA 72 bp AGCCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTaGGGAACATTTGCACGGCAGGAGCGGCCGGCCTGG +
Preference number: 3 (lower is better)
Translates to: SRLLDPIGAMCC*GTFARQERPAW
Trigger: CCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
3UTR-3UTR CAA 90 bp TATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCGAGCCCAGGAGGGGGTaGCTCAGGGTCCGCATGGTG +
Preference number: 3 (lower is better)
Translates to: YVLLRNICTAGAAGLVYSEPRRG*LRVRMV
Trigger: CACCATGCGGACCCTGAGCAACCCCCTCCTGGGCTC...GCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
3UTR GCA 72 bp GGGCCAGTGCCACGTAGAGTGGCTTGGTGCCCACGATaGGCCCGTTCATCTCTGTCACGGCCTTTGTCGCCT +
Preference number: 3 (lower is better)
Translates to: GPVPRRVAWCPR*ARSSLSRPLSP
Trigger: AGGCGACAAAGGCCGTGACAGAGATGAACGGGCGCATCGTGGGCACCAAGCCACTCTACGTGGCACTGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217074.9
3UTR GCA 72 bp CTTTGCGCTGGGCCAGTGCCACGTAGAGTGGCTTGGTaGCCACGATGCGCCCGTTCATCTCTGTCACGGCCT +
Preference number: 3 (lower is better)
Translates to: LCAGPVPRRVAW*PRCARSSLSRP
Trigger: AGGCCGTGACAGAGATGAACGGGCGCATCGTGGGCACCAAGCCACTCTACGTGGCACTGGCCCAGCGCAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217074.9
3UTR CCA 72 bp GCCAAGGGCTACTCTCTGGGTATGAGGCACCGTGCGTaGCACCTGGGTGGAGGCCTGCCTGACACTGCTGAT +
Preference number: 3 (lower is better)
Translates to: AKGYSLGMRHRA*HLGGGLPDTAD
Trigger: ATCAGCAGTGTCAGGCAGGCCTCCACCCAGGTGCCACGCACGGTGCCTCATACCCAGAGAGTAGCCCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000674244.1
3UTR TCA 72 bp GTAGAATGGCAGTTGCCAAGGGCTACTCTCTGGGTATaGGGCACCGTGCGTGGCACCTGGGTGGAGGCCTGC +
Preference number: 3 (lower is better)
Translates to: VEWQLPRATLWV*GTVRGTWVEAC
Trigger: GCAGGCCTCCACCCAGGTGCCACGCACGGTGCCTCATACCCAGAGAGTAGCCCTTGGCAACTGCCATTCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000674244.1
3UTR TCA 72 bp GCTCCTGGACCTTACCCGATAGGTGCTATGTGCTGCTaGGGAACATTTGCACGGCAGGAGCGGCCGGCCTGG +
Preference number: 3 (lower is better)
Translates to: APGPYPIGAMCC*GTFARQERPAW
Trigger: CCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTAAGGTCCAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476056.6
3UTR GCA 72 bp AGGGGGTTGCTCAGGGTCCGCATGGTGGAGAGGCGCTaGATGTACTGGTTGGTCAAGATGGCCTTCCGCTCC +
Preference number: 3 (lower is better)
Translates to: RGLLRVRMVERR*MYWLVKMAFRS
Trigger: GGAGCGGAAGGCCATCTTGACCAACCAGTACATGCAGCGCCTCTCCACCATGCGGACCCTGAGCAACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
3UTR GCA 72 bp GTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTaGCTGCAGCACGGCCACTGCCTCGTCTATCTTGGC +
Preference number: 3 (lower is better)
Translates to: VHVRLRLLHSLV*LQHGHCLVYLG
Trigger: GCCAAGATAGACGAGGCAGTGGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674318.1
3UTR GCA 72 bp CTCTGGGCCTGGTTTCAGTGCATGTACGCCTTCGGCTaGTCCATAGCCTGGTGTGCCTGCAGCACGGCCACT +
Preference number: 3 (lower is better)
Translates to: LWAWFQCMYAFG*SIAWCACSTAT
Trigger: AGTGGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGGCCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674318.1
3UTR-3UTR CAA 90 bp GAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGAGTTTCAATCATCTGCTTTaGCTCATGCAGGGGCGCCGC +
Preference number: 3 (lower is better)
Translates to: ERPAWCTASYPTGSCGLSFNHLL*LMQGRR
Trigger: GCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGAA...ACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476056.6
3UTR GCA 72 bp GGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTaGACGGCAGGAGCGGCCGGCCTGGTGTACAGCATC +
Preference number: 3 (lower is better)
Translates to: GPDRCYVLLRNI*TAGAAGLVYSI
Trigger: GATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
3UTR CCA 72 bp CTCAGGGTCCGCATGGTGGAGAGGCGCTGCATGTACTaGTTGGTCAAGATGGCCTTCCGCTCCTCTTTGCGC +
Preference number: 3 (lower is better)
Translates to: LRVRMVERRCMY*LVKMAFRSSLR
Trigger: GCGCAAAGAGGAGCGGAAGGCCATCTTGACCAACCAGTACATGCAGCGCCTCTCCACCATGCGGACCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
3UTR CCA 72 bp GGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTaGGTCCTGTGGTCTGAGTACCAATGTTGGCTACTC +
Preference number: 3 (lower is better)
Translates to: GAAGLVYSILPH*VLWSEYQCWLL
Trigger: GAGTAGCCAACATTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537323.5
3UTR CCA 72 bp TTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTaGTGTGCCTGCAGCACGGCCACTGCCTCGTCTATC +
Preference number: 3 (lower is better)
Translates to: FQCMYAFGCSIA*CACSTATASSI
Trigger: GATAGACGAGGCAGTGGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674318.1
3UTR GCA 72 bp TTACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTaGACGGCAGGAGCGGCCGGCCTGGTGTACAGCATC +
Preference number: 3 (lower is better)
Translates to: LPDRCYVLLRNI*TAGAAGLVYSI
Trigger: GATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476056.6
3UTR TCA 72 bp TCAGAGGGATGGAGTGACTTGTCCGGATCGCAGGGTTaGTGCCCTTTCCACCGCACCACTGCTGTTTCTGAG +
Preference number: 3 (lower is better)
Translates to: SEGWSDLSGSQG*CPFHRTTAVSE
Trigger: CTCAGAAACAGCAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
3UTR TCA 72 bp TGTGGTAGGTGGGCACGCATGATCAGAGGGATGGAGTaGCTTGTCCGGATCGCAGGGTTGATGCCCTTTCCA +
Preference number: 3 (lower is better)
Translates to: CGRWARMIRGME*LVRIAGLMPFP
Trigger: TGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCTCTGATCATGCGTGCCCACCTACCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
3UTR GCA 72 bp TTCCTTTTCTGGTTTCAGTGCATGTACGCCTTCGGCTaGTCCATAGCCTGGTGTGCCTGCAGCACGGCCACT +
Preference number: 3 (lower is better)
Translates to: FLFWFQCMYAFG*SIAWCACSTAT
Trigger: AGTGGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGAAAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
3UTR GCA 72 bp CTAGTCTTTGTACTTTCCGTCTCTGGGCCAATCATCTaGTTTTGCTCATGCAGGGGCGCCGCAGCCAGCATG +
Preference number: 3 (lower is better)
Translates to: LVFVLSVSGPII*FCSCRGAAASM
Trigger: CATGCTGGCTGCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGGCCCAGAGACGGAAAGTACAAAGACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490798.6
3UTR CCA 72 bp GGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTaGTCTGAGTACCAATGTTGGATGAGGTACCAAGCA +
Preference number: 3 (lower is better)
Translates to: GLVYSILPHWVL*SEYQCWMRYQA
Trigger: TGCTTGGTACCTCATCCAACATTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000674244.1
ENST00000674318.1
3UTR CCA 72 bp GGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTaGTCTGAGTACCAATGTTGGCTACTCTCTGGGTAT +
Preference number: 3 (lower is better)
Translates to: GLVYSILPHWVL*SEYQCWLLSGY
Trigger: ATACCCAGAGAGTAGCCAACATTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537323.5
3UTR-3UTR CAA 90 bp CTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGCTACAGATTTCCTAGGGTCCGGATCGCAGGGTaGATGCCCTTTCCACCGCAC +
Preference number: 3 (lower is better)
Translates to: LDLARTGVWFCCCYRFPRVRIAG*MPFPPH
Trigger: GTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGAC...CCTAGGAAATCTGTAGCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
3UTR TCA 72 bp ACCTGGAGGGTAGGCAGCGTGGTGGCCTTTAATGGGTaGCATCTTTCTACTTCCTGTAAGTCCCACGAGGTC +
Preference number: 3 (lower is better)
Translates to: TWRVGSVVAFNG*HLSTSCKSHEV
Trigger: GACCTCGTGGGACTTACAGGAAGTAGAAAGATGTCACCCATTAAAGGCCACCACGCTGCCTACCCTCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674244.1
3UTR GCA 72 bp AGTCTTTGTACTTTCCGTCTCTGGGCCTGGTTTCAGTaGATGTACGCCTTCGGCTGCTCCATAGCCTGGTGT +
Preference number: 3 (lower is better)
Translates to: SLCTFRLWAWFQ*MYAFGCSIAWC
Trigger: ACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGGCCCAGAGACGGAAAGTACAAAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674318.1
3UTR-3UTR CAA 90 bp CACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCAGTGCCGCTGCATGTACTGGTaGGTCAAGATGGCCTTCCGC +
Preference number: 3 (lower is better)
Translates to: HCPFGSHGSEDFLFWFQCRCMYW*VKMAFR
Trigger: GCGGAAGGCCATCTTGACCAACCAGTACATGCAGCG...GCACTGAAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
3UTR TCA 72 bp GGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTaGGTACCAATGTTGGATGAGGTACCAAGCAAGAAC +
Preference number: 3 (lower is better)
Translates to: GVQHPTPLGPVV*VPMLDEVPSKN
Trigger: GTTCTTGCTTGGTACCTCATCCAACATTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000674244.1
ENST00000674318.1
3UTR-3UTR CAA 90 bp TGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTCCCAATCATCTGCTTTaGCTCATGCAGGGGCGCCGC +
Preference number: 3 (lower is better)
Translates to: WVTNLHSHTEPKYRYRLIPNHLL*LMQGRR
Trigger: GCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGGG...AATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
3UTR CCA 72 bp CTACCCCACTGGGTCCTGTGGTCTGAGTACCAATGTTaGATGAGGTACCAAGCAAGAACAGTCAAATTCACA +
Preference number: 3 (lower is better)
Translates to: LPHWVLWSEYQC*MRYQARTVKFT
Trigger: TGTGAATTTGACTGTTCTTGCTTGGTACCTCATCCAACATTGGTACTCAGACCACAGGACCCAGTGGGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000674244.1
3UTR CCA 72 bp TATTTTACTAGTCTTTGTACTTTCCGTCTCTGGGCCTaGTTTCAGTGCATGTACGCCTTCGGCTGCTCCATA +
Preference number: 3 (lower is better)
Translates to: YFTSLCTFRLWA*FQCMYAFGCSI
Trigger: TATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGGCCCAGAGACGGAAAGTACAAAGACTAGTAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674318.1
3UTR CCA 72 bp AGGGAGAGAACTCTTTCCTCAGTTTGTCGTCATCAATaGAGTCGTCCAGATTCTTCACATACAAGTTCACAC +
Preference number: 3 (lower is better)
Translates to: RERTLSSVCRHQ*SRPDSSHTSSH
Trigger: GTGTGAACTTGTATGTGAAGAATCTGGACGACTCCATTGATGACGACAAACTGAGGAAAGAGTTCTCTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217074.9
3UTR TCA 72 bp TTAATACACAAAGCAAAAGGTAATAGGCTGGATGGGTaGCCAACCTTCATTCACATACAGAGCCCAAGTATA +
Preference number: 3 (lower is better)
Translates to: LIHKAKGNRLDG*PTFIHIQSPSI
Trigger: TATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTTTTGCTTTGTGTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217075.7
ENST00000255136.8
ENST00000372822.2
ENST00000476056.6
ENST00000537323.5
3UTR CAA 72 bp CCTGCGCTTCAGTTCATTCTGCCGCTCCACGCGCTTTaGGGCCCGGCCCGCGTACAGCAGCCGCCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: PALQFILPLHAL*GPARVQQPPAH
Trigger: GTGAGCGGGCGGCTGCTGTACGCGGGCCGGGCCCAAAAGCGCGTGGAGCGGCAGAATGAACTGAAGCGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217074.9
CDS-3UTR CCA 90 bp GTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCTGCAGCACGGCCACCGCTCCACGCGCTTTTaGGCCCGGCCCGCGTACAGC +
Preference number: 4 (lower is better)
Translates to: VHVRLRLLHSLVCLQHGHRSTRF*ARPAYS
Trigger: GCTGTACGCGGGCCGGGCCCAAAAGCGCGTGGAGCG...GTGGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp TGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGGGCTGCTCCATAGCCTaGTGTGCCTGCAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: CTAGAAGLVYSILPHWVLGCSIA*CACSTA
Trigger: GGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCC...CAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674318.1
CDS-3UTR TCA 90 bp GCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGCTACTCTCTGGGTATaGGGCACCGTGCGTGGCACC +
Preference number: 4 (lower is better)
Translates to: ARQERPAWCTASYPTGSCATLWV*GTVRGT
Trigger: GGTGCCACGCACGGTGCCTCATACCCAGAGAGTAGC...ACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR GCA 90 bp CAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGGTTCATTGTGTCCAGTaGCCGCTCCGCGTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: QERPAWCTASYPTGSCGLVHCVQ*PLRVRG
Trigger: CCCGCGGACGCGGAGCGGGCACTGGACACAATGAAC...CAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR GCA 90 bp GGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCCCTTCCGCTCCTCTTTaGGCTGGGCCAGTGCCACGT +
Preference number: 4 (lower is better)
Translates to: GRSGRPGVQHPTPLGPVVPSAPL*AGPVPR
Trigger: ACGTGGCACTGGCCCAGCGCAAAGAGGAGCGGAAGG...GACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR GCA 90 bp CAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGGGGTATGAGGCACCGTaGGTGGCACCTGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QERPAWCTASYPTGSCGLGYEAP*VAPGWR
Trigger: CCTCCACCCAGGTGCCACGCACGGTGCCTCATACCC...CAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR GCA 90 bp GCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTCTGCTGAGGAACATTTaGACGGCAGGAGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: ARQERPAWCTASYPTGSCLLRNI*TAGAAG
Trigger: GCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAG...ACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CCA 90 bp CTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACGCGGCACACGCGGATaGACAGGATGGGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: LLRNICTAGAAGLVYSILRGTRG*TGWGRR
Trigger: CCGCCGGCCCCATCCTGTCCATCCGCGTGTGCCGCG...TAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CCA 90 bp CAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGACCGTGCGTGGCACCTaGGTGGAGGCCTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: QERPAWCTASYPTGSCGLTVRGT*VEACLT
Trigger: TGTCAGGCAGGCCTCCACCCAGGTGCCACGCACGGT...CAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CCA 90 bp GCCGAGGCACAACTGGTGGCCGGACCATTGAGGCACCTGGAGGGTAGGCAGCGTCAGGGGCTCCTGTCCTaGGATGTGCACAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: AEAQLVAGPLRHLEGRQRQGLLS*DVHSRL
Trigger: GAGCCGGCTGTGCACATCCCAGGACAGGAGCCCCTG...ACGCTGCCTACCCTCCAGGTGCCTCAATGGTCCGGCCACCAGTTGTGCCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674244.1
CDS-3UTR GCA 90 bp GCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTCGTAGAGTGGCTTGGTaGCCACGATGCGCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: ARQERPAWCTASYPTGSCRRVAW*PRCARS
Trigger: TGAACGGGCGCATCGTGGGCACCAAGCCACTCTACG...ACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGAGATAGCCTGGTGTGCCTaGAGCACGGCCACTGCCTCG +
Preference number: 4 (lower is better)
Translates to: GAAGLVYSILPHWVLWSEIAWCA*STATAS
Trigger: CGAGGCAGTGGCCGTGCTGCAGGCACACCAGGCTAT...CTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674318.1
CDS-3UTR CCA 90 bp TGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCGCTCCACGCGCTTTTaGGCCCGGCCCGCGTACAGC +
Preference number: 4 (lower is better)
Translates to: CAAEEHLHGRSGRPGVQHRSTRF*ARPAYS
Trigger: GCTGTACGCGGGCCGGGCCCAAAAGCGCGTGGAGCG...ATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000490798.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTTGCTCAGGGTCCGCATaGTGGAGAGGCGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: ARQERPAWCTASYPTGSCCSGSA*WRGAAC
Trigger: ACATGCAGCGCCTCTCCACCATGCGGACCCTGAGCA...ACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR CCA 90 bp GAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGAGTCAGGGGCTCCTGTCCTaGGATGTGCACAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: ERPAWCTASYPTGSCGLSQGLLS*DVHSRL
Trigger: GAGCCGGCTGTGCACATCCCAGGACAGGAGCCCCTG...ACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR TCA 90 bp TGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGGATGTTGCCCACACCTaGCTTGCGAAGTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: CTAGAAGLVYSILPHWVLDVAHT*LAKSWV
Trigger: GACCCAGGACTTCGCAAGTCAGGTGTGGGCAACATC...CAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR GCA 90 bp GGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCCGCCTCAGCCGGTCCTaGTTCATCTGCTCAAACCTG +
Preference number: 4 (lower is better)
Translates to: GRSGRPGVQHPTPLGPVVRLSRS*FICSNL
Trigger: CAGGTTTGAGCAGATGAAGCAGGACCGGCTGAGGCG...GACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp TTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTCGTAGAGTGGCTTGGTaGCCACGATGCGCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: LHGRSGRPGVQHPTPLGPRRVAW*PRCARS
Trigger: TGAACGGGCGCATCGTGGGCACCAAGCCACTCTACG...AGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTTTGCGCTGGGCCAGTaGCACGTAGAGTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: GRSGRPGVQHPTPLGPVVFALGQ*HVEWLG
Trigger: ACCAAGCCACTCTACGTGGCACTGGCCCAGCGCAAA...GACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTAGCCCAGGAGGGGGTTaGTCAGGGTCCGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: GTFARQERPAWCTASYPTSPGGG*SGSAWW
Trigger: CCACCATGCGGACCCTGAGCAACCCCCTCCTGGGCT...AGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR GCA 90 bp GCTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGAGCCCAGGAGGGGGTTaGTCAGGGTCCGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: APVLGCAQPAPGPDRCYVSPGGG*SGSAWW
Trigger: CCACCATGCGGACCCTGAGCAACCCCCTCCTGGGCT...CACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR GCA 90 bp GCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCGGGTATGAGGCACCGTaGGTGGCACCTGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: AEEHLHGRSGRPGVQHPTGYEAP*VAPGWR
Trigger: CCTCCACCCAGGTGCCACGCACGGTGCCTCATACCC...GGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR GCA 90 bp GGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCCTGCAGCACGGCCACTaGCTCGTCTATCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: GRSGRPGVQHPTPLGPVVLQHGH*LVYLGM
Trigger: CATGCCAAGATAGACGAGGCAGTGGCCGTGCTGCAG...GACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674318.1
CDS-3UTR GCA 90 bp GGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCATGTACGCCTTCGGCTaGTCCATAGCCTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: GRSGRPGVQHPTPLGPVVMYAFG*SIAWCA
Trigger: GGCACACCAGGCTATGGAGCAGCCGAAGGCGTACAT...GACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674318.1
CDS-3UTR CCA 90 bp GCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGACGCGGCACACGCGGATaGACAGGATGGGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: APGPDRCYVLLRNICTAGRGTRG*TGWGRR
Trigger: CCGCCGGCCCCATCCTGTCCATCCGCGTGTGCCGCG...TCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CCA 90 bp CAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCCGCGGCACACGCGGATaGACAGGATGGGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: QGLRAESQKHCPFGSHGSRGTRG*TGWGRR
Trigger: CCGCCGGCCCCATCCTGTCCATCCGCGTGTGCCGCG...GCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp GCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCCGCTCCACGCGCTTTTaGGCCCGGCCCGCGTACAGC +
Preference number: 4 (lower is better)
Translates to: AQPAPGPDRCYVLLRNICRSTRF*ARPAYS
Trigger: GCTGTACGCGGGCCGGGCCCAAAAGCGCGTGGAGCG...GCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCACCGTGCGTGGCACCTaGGTGGAGGCCTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: AEEHLHGRSGRPGVQHPTTVRGT*VEACLT
Trigger: TGTCAGGCAGGCCTCCACCCAGGTGCCACGCACGGT...GGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CCA 90 bp GCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCATGAGGCACCGTGCGTaGCACCTGGGTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: AEEHLHGRSGRPGVQHPTMRHRA*HLGGGL
Trigger: CAGGCCTCCACCCAGGTGCCACGCACGGTGCCTCAT...GGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CCA 90 bp GCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTCAGGAGCGGCCGGCCTaGTGTACAGCATCCTACCCC +
Preference number: 4 (lower is better)
Translates to: AAEEHLHGRSGRPGVQHPQERPA*CTASYP
Trigger: GGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTG...AGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CCA 90 bp CTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCCAGGAGCGGCCGGCCTaGTGTACAGCATCCTACCCC +
Preference number: 4 (lower is better)
Translates to: LLSWDVHSRLLDPIGAMCQERPA*CTASYP
Trigger: GGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTG...GCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CCA 90 bp GCTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCAGGGGCTCCTGTCCTaGGATGTGCACAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: APVLGCAQPAPGPDRCYVQGLLS*DVHSRL
Trigger: GAGCCGGCTGTGCACATCCCAGGACAGGAGCCCCTG...CACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR TCA 90 bp GCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGAGTACCAACCAGCAGCATGCCCGTaGTCTTGCCAGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AGLVYSILPHWVLWSEYQPAACP*SCQPAG
Trigger: CCCAGCTGGCTGGCAAGATCACGGGCATGCTGCTGG...TTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR TCA 90 bp TTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTATCAGAGGGATGGAGTaGCTTGTCCGGATCGCAGGG +
Preference number: 4 (lower is better)
Translates to: LHGRSGRPGVQHPTPLGPIRGME*LVRIAG
Trigger: CCCTGCGATCCGGACAAGTCACTCCATCCCTCTGAT...AGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674318.1
CDS-3UTR GCA 90 bp CCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCCTTCCGCTCCTCTTTaGGCTGGGCCAGTGCCACGT +
Preference number: 4 (lower is better)
Translates to: PVLGCAQPAPGPDRCYVLPSAPL*AGPVPR
Trigger: ACGTGGCACTGGCCCAGCGCAAAGAGGAGCGGAAGG...CAGCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR GCA 90 bp GGGGTTGCTCAGGGTCCGCATGGTGGAGAGGCGCTGCATGTACTGGTTGGTCAAAGCCCAGGAGGGGGTTaGTCAGGGTCCGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: GVAQGPHGGEALHVLVGQSPGGG*SGSAWW
Trigger: CCACCATGCGGACCCTGAGCAACCCCCTCCTGGGCT...TTGACCAACCAGTACATGCAGCGCCTCTCCACCATGCGGACCCTGAGCAACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR GCA 90 bp GCTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTaGACGGCAGGAGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: APVLGCAQPAPGPDRCYVLLRNI*TAGAAG
Trigger: GCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAG...CACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR GCA 90 bp CCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTCCATAGCCTGGTGTaGCTGCAGCACGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: PVLGCAQPAPGPDRCYVLLHSLV*LQHGHC
Trigger: GCAGTGGCCGTGCTGCAGGCACACCAGGCTATGGAG...CAGCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000537323.5
ENST00000674318.1
CDS-3UTR GCA 90 bp GAGCCCAGGAGGGGGTTGCTCAGGGTCCGCATGGTGGAGAGGCGCTGCATGTACATGTACGCCTTCGGCTaGTCCATAGCCTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: EPRRGLLRVRMVERRCMYMYAFG*SIAWCA
Trigger: GGCACACCAGGCTATGGAGCAGCCGAAGGCGTACAT...GTACATGCAGCGCCTCTCCACCATGCGGACCCTGAGCAACCCCCTCCTGGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR GCA 90 bp TTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTTGGGCCTGGTTTCAGTaGATGTACGCCTTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LHGRSGRPGVQHPTPLGPWAWFQ*MYAFGC
Trigger: GCAGCCGAAGGCGTACATGCACTGAAACCAGGCCCA...AGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674318.1
CDS-3UTR CCA 90 bp GGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGAACCGCTGGCGTTCATaGTGGGCAGGGGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: GLRAESQKHCPFGSHGSENRWRS*WAGGRG
Trigger: GCCCCGGCCCCCTGCCCACCATGAACGCCAGCGGTT...CTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp GAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGAGTCAGTGCCACGTAGAGTaGCTTGGTGCCCACGATGCG +
Preference number: 4 (lower is better)
Translates to: ERPAWCTASYPTGSCGLSQCHVE*LGAHDA
Trigger: CGCATCGTGGGCACCAAGCCACTCTACGTGGCACTG...ACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp CAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGTCAGGGTCCGCATGGTaGAGAGGCGCTGCATGTACT +
Preference number: 4 (lower is better)
Translates to: QERPAWCTASYPTGSCGLSGSAW*RGAACT
Trigger: AGTACATGCAGCGCCTCTCCACCATGCGGACCCTGA...CAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR CCA 90 bp TATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATGAGGCACCGTGCGTaGCACCTGGGTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: YVLLRNICTAGAAGLVYSMRHRA*HLGGGL
Trigger: CAGGCCTCCACCCAGGTGCCACGCACGGTGCCTCAT...GCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CCA 90 bp TGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGAGCATCCTACCCCACTaGGTCCTGTGGTCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: CTAGAAGLVYSILPHWVLSILPH*VLWSEY
Trigger: GTACTCAGACCACAGGACCCAGTGGGGTAGGATGCT...CAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CCA 90 bp CTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTAGGCTGCTCCATAGCCTaGTGTGCCTGCAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: LLRNICTAGAAGLVYSILGCSIA*CACSTA
Trigger: GGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCC...TAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674318.1
CDS-3UTR TCA 90 bp CTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGTCACGTAGATGTTGGTaGACTCCAGGGCCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: LCAAEEHLHGRSGRPGVQSRRCW*TPGPAP
Trigger: GGGCGCGGGCCCTGGAGTTCACCAACATCTACGTGA...CTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR TCA 90 bp AGCATGCCCGTGATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTGGTGGCCGGACCATTaGGGCACCTGGAGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: SMPVILPASWVWTSWIRGWWPDH*GTWRVG
Trigger: GCCTACCCTCCAGGTGCCTCAATGGTCCGGCCACCA...CCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATCACGGGCATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000674244.1
CDS-3UTR TCA 90 bp CTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGTCCGGATCGCAGGGTTaGTGCCCTTTCCACCGCACC +
Preference number: 4 (lower is better)
Translates to: LCAAEEHLHGRSGRPGVQSGSQG*CPFHRT
Trigger: GGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGA...CTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490798.6
ENST00000674318.1
CDS-3UTR TCA 90 bp CCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGTGGTGGCCGGACCATTaGGGCACCTGGGGCATGGCA +
Preference number: 4 (lower is better)
Translates to: PGPDRCYVLLRNICTAGAWWPDH*GTWGMA
Trigger: TGCCATGCCCCAGGTGCCTCAATGGTCCGGCCACCA...CGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537323.5
CDS-3UTR GCA 90 bp TGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGGTCCTGCAGGCCTTaGTCGTCCACATCCACCGGG +
Preference number: 4 (lower is better)
Translates to: CYVLLRNICTAGAAGLVYRSCRP*SSTSTG
Trigger: CCCGGTGGATGTGGACGAGCAAGGCCTGCAGGACCT...GTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR GCA 90 bp GAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGAGTGCTTGGTGCCCACGATaGGCCCGTTCATCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: ERPAWCTASYPTGSCGLSAWCPR*ARSSLS
Trigger: TGACAGAGATGAACGGGCGCATCGTGGGCACCAAGC...ACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp TGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTTCCGCTCCTCTTTaGGCTGGGCCAGTGCCACGT +
Preference number: 4 (lower is better)
Translates to: CAAEEHLHGRSGRPGVQHPSAPL*AGPVPR
Trigger: ACGTGGCACTGGCCCAGCGCAAAGAGGAGCGGAAGG...ATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR GCA 90 bp AGCATGCCCGTGATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGAGCCCAGGAGGGGGTTaGTCAGGGTCCGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: SMPVILPASWVWTSWIRGSPGGG*SGSAWW
Trigger: CCACCATGCGGACCCTGAGCAACCCCCTCCTGGGCT...CCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATCACGGGCATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR GCA 90 bp GTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCTGCAGCACGGGTATGAGGCACCGTaGGTGGCACCTGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: VSVHVRLRLLHSLVCLQHGYEAP*VAPGWR
Trigger: CCTCCACCCAGGTGCCACGCACGGTGCCTCATACCC...GTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674318.1
CDS-3UTR GCA 90 bp CTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCATCTGCTTTTGCTCATaGAGGGGCGCCGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLSWDVHSRLLDPIGAMCICFCS*RGAAAS
Trigger: GCTGGCTGCGGCGCCCCTGCATGAGCAAAAGCAGAT...GCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CCA 90 bp AGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATCGCGGCACACGCGGATaGACAGGATGGGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: SLQGLRAESQKHCPFGSHRGTRG*TGWGRR
Trigger: CCGCCGGCCCCATCCTGTCCATCCGCGTGTGCCGCG...ATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp TTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGACCAGCGAGCGCCGGGTaGCTACATCGCGGCACACGC +
Preference number: 4 (lower is better)
Translates to: LQGLRAESQKHCPFGSHGPASAG*LHRGTR
Trigger: GCGTGTGCCGCGATGTAGCCACCCGGCGCTCGCTGG...TCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp CTTTTCTGGTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCCCAGCGAGCGCCGGGTaGCTACATCGCGGCACACGC +
Preference number: 4 (lower is better)
Translates to: LFWFQCMYAFGCSIAWCAPASAG*LHRGTR
Trigger: GCGTGTGCCGCGATGTAGCCACCCGGCGCTCGCTGG...GGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CCA 90 bp GCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTCCAAAGCACCGCGAGTaGCCGCTGTTGTCCCTCATC +
Preference number: 4 (lower is better)
Translates to: AAEEHLHGRSGRPGVQHPPKHRE*PLLSLI
Trigger: GATGAGGGACAACAGCGGCCACTCGCGGTGCTTTGG...AGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CCA 90 bp TTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGACGCTCCACGCGCTTTTaGGCCCGGCCCGCGTACAGC +
Preference number: 4 (lower is better)
Translates to: LQGLRAESQKHCPFGSHGRSTRF*ARPAYS
Trigger: GCTGTACGCGGGCCGGGCCCAAAAGCGCGTGGAGCG...TCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp TGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCACGTAGAGTGGCTTaGTGCCCACGATGCGCCCGT +
Preference number: 4 (lower is better)
Translates to: CAAEEHLHGRSGRPGVQHPRRVA*CPRCAR
Trigger: ACGGGCGCATCGTGGGCACCAAGCCACTCTACGTGG...ATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000490798.6
ENST00000537323.5
CDS-3UTR CCA 90 bp CCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCAGTGCCACGTAGAGTaGCTTGGTGCCCACGATGCG +
Preference number: 4 (lower is better)
Translates to: PVLGCAQPAPGPDRCYVLQCHVE*LGAHDA
Trigger: CGCATCGTGGGCACCAAGCCACTCTACGTGGCACTG...CAGCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGCTGCATGTACTGGTTaGTCAAGATGGCCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: ARQERPAWCTASYPTGSCAACTG*SRWPSA
Trigger: AGCGGAAGGCCATCTTGACCAACCAGTACATGCAGC...ACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR CCA 90 bp GCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGCTCCCCAATACCGTGCGTGGCACCTaGGTGGAGGCCTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: ASQLGVDIMDKGVETLPNTVRGT*VEACLT
Trigger: TGTCAGGCAGGCCTCCACCCAGGTGCCACGCACGGT...ATTGGGGAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CCA 90 bp GGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGAGCCCCACTGGGTCCTGTaGTCTGAGTACCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: GAAGLVYSILPHWVLWSEPHWVL*SEYQCW
Trigger: CCAACATTGGTACTCAGACCACAGGACCCAGTGGGG...CTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CCA 90 bp GCCAAGGGCTACTCTCTGGGTATGAGGCACCGTGCGTGGCACCTGGGTGGAGGCAGCATCCTACCCCACTaGGTCCTGTGGTCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: AKGYSLGMRHRAWHLGGGSILPH*VLWSEY
Trigger: GTACTCAGACCACAGGACCCAGTGGGGTAGGATGCT...GCCTCCACCCAGGTGCCACGCACGGTGCCTCATACCCAGAGAGTAGCCCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000674244.1
CDS-3UTR CCA 90 bp GTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCTGCAGCACCAGGAGCGGCCGGCCTaGTGTACAGCATCCTACCCC +
Preference number: 4 (lower is better)
Translates to: VSVHVRLRLLHSLVCLQHQERPA*CTASYP
Trigger: GGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTG...GTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674318.1
CDS-3UTR CCA 90 bp AGCATGCCCGTGATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGCAGGGGCTCCTGTCCTaGGATGTGCACAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: SMPVILPASWVWTSWIRGQGLLS*DVHSRL
Trigger: GAGCCGGCTGTGCACATCCCAGGACAGGAGCCCCTG...CCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATCACGGGCATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CCA 90 bp AGGGATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCAGGCTGCTCCATAGCCTaGTGTGCCTGCAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: RDGVTCPDRRVDALSTAPGCSIA*CACSTA
Trigger: GGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCC...TGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674318.1
CDS-3UTR TCA 90 bp GTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCTGCAGCACGGCCACGCTCCCGTCGAGACTTaGAGTGACCCACAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: VHVRLRLLHSLVCLQHGHAPVET*SDPQSL
Trigger: CAAGCTTTGTGGGTCACTTCAAGTCTCGACGGGAGC...GTGGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217074.9
CDS-3UTR TCA 90 bp CCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGTCCGGATCGCAGGGTTaGTGCCCTTTCCACCGCACC +
Preference number: 4 (lower is better)
Translates to: PGPDRCYVLLRNICTAGASGSQG*CPFHRT
Trigger: GGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGA...CGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490798.6
ENST00000674318.1
CDS-3UTR GCA 90 bp GAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGATGGTGTTGATGGCCTaGTGTGCGGCCTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: EHLHGRSGRPGVQHPTPLMVLMA*CAASWV
Trigger: GACCCATGAGGCCGCACAGCAGGCCATCAACACCAT...CAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537323.5
CDS-3UTR GCA 90 bp CCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCAAGGTCCTGCAGGCCTTaGTCGTCCACATCCACCGGG +
Preference number: 4 (lower is better)
Translates to: PAPGPDRCYVLLRNICTARSCRP*SSTSTG
Trigger: CCCGGTGGATGTGGACGAGCAAGGCCTGCAGGACCT...TGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR GCA 90 bp GAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGCTTGGTGCCCACGATaGGCCCGTTCATCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: EHLHGRSGRPGVQHPTPLAWCPR*ARSSLS
Trigger: TGACAGAGATGAACGGGCGCATCGTGGGCACCAAGC...CAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp CAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGGGTATGAGGCACCGTaGGTGGCACCTGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QGLRAESQKHCPFGSHGSGYEAP*VAPGWR
Trigger: CCTCCACCCAGGTGCCACGCACGGTGCCTCATACCC...GCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GGGCTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGCCAATCATCTGCTTTTaGTCATGCAGGGGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: GLLSWDVHSRLLDPIGAMPIICF*SCRGAA
Trigger: TGCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGG...CATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR GCA 90 bp GCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGCTCCCCAATATAGCCTGGTGTGCCTaGAGCACGGCCACTGCCTCG +
Preference number: 4 (lower is better)
Translates to: ASQLGVDIMDKGVETLPNIAWCA*STATAS
Trigger: CGAGGCAGTGGCCGTGCTGCAGGCACACCAGGCTAT...ATTGGGGAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000537323.5
ENST00000674318.1
CDS-3UTR CCA 90 bp GGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCAGCATTTTCCCAAACTaGGAGAAGAGGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GRSGRPGVQHPTPLGPVVSIFPN*EKRSCR
Trigger: CCTGCAGGACCTCTTCTCCCAGTTTGGGAAAATGCT...GACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CCA 90 bp GCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGCTCCCCAATCCACGTAGAGTGGCTTaGTGCCCACGATGCGCCCGT +
Preference number: 4 (lower is better)
Translates to: ASQLGVDIMDKGVETLPNPRRVA*CPRCAR
Trigger: ACGGGCGCATCGTGGGCACCAAGCCACTCTACGTGG...ATTGGGGAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CCA 90 bp CTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCAGTGCCACGTAGAGTaGCTTGGTGCCCACGATGCG +
Preference number: 4 (lower is better)
Translates to: LCAAEEHLHGRSGRPGVQQCHVE*LGAHDA
Trigger: CGCATCGTGGGCACCAAGCCACTCTACGTGGCACTG...CTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000490798.6
ENST00000537323.5
CDS-3UTR CCA 90 bp CCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCTGTCAGGGTCCGCATGGTaGAGAGGCGCTGCATGTACT +
Preference number: 4 (lower is better)
Translates to: PVLGCAQPAPGPDRCYVLSGSAW*RGAACT
Trigger: AGTACATGCAGCGCCTCTCCACCATGCGGACCCTGA...CAGCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR CCA 90 bp TGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATTGCTCAGGGTCCGCATaGTGGAGAGGCGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: CAAEEHLHGRSGRPGVQHCSGSA*WRGAAC
Trigger: ACATGCAGCGCCTCTCCACCATGCGGACCCTGAGCA...ATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR CCA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCGCTGGGATGTCCACCTaGGGGCAGGCTGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RVCRALGLRARNTVLLAAAGMST*GQAGWV
Trigger: CACCCACCCAGCCTGCCCCCAGGTGGACATCCCAGC...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217073.7
ENST00000255136.8
CDS-3UTR CCA 90 bp CAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCCAGGAGCGGCCGGCCTaGTGTACAGCATCCTACCCC +
Preference number: 4 (lower is better)
Translates to: QGLRAESQKHCPFGSHGSQERPA*CTASYP
Trigger: GGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTG...GCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGGCTGCTCCATAGCCTaGTGTGCCTGCAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: APGPDRCYVLLRNICTAGGCSIA*CACSTA
Trigger: GGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCC...TCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000537323.5
ENST00000674318.1
CDS-3UTR CCA 90 bp GGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGGCTGCTCCATAGCCTaGTGTGCCTGCAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: GLRAESQKHCPFGSHGSEGCSIA*CACSTA
Trigger: GGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCC...CTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp GCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCTACTCTCTGGGTATaGGGCACCGTGCGTGGCACC +
Preference number: 4 (lower is better)
Translates to: APGPDRCYVLLRNICTAGATLWV*GTVRGT
Trigger: GGTGCCACGCACGGTGCCTCATACCCAGAGAGTAGC...TCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR TCA 90 bp TTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGACCAGCAGCATGCCCGTaGTCTTGCCAGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LQGLRAESQKHCPFGSHGPAACP*SCQPAG
Trigger: CCCAGCTGGCTGGCAAGATCACGGGCATGCTGCTGG...TCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp GTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCTGCAGCACGGCCACCTGGGTCCTGTGGTCTaGGTACCAATGTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: VHVRLRLLHSLVCLQHGHLGPVV*VPMLDE
Trigger: CTCATCCAACATTGGTACTCAGACCACAGGACCCAG...GTGGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000674318.1
CDS-3UTR TCA 90 bp TGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATATCAGAGGGATGGAGTaGCTTGTCCGGATCGCAGGG +
Preference number: 4 (lower is better)
Translates to: CAAEEHLHGRSGRPGVQHIRGME*LVRIAG
Trigger: CCCTGCGATCCGGACAAGTCACTCCATCCCTCTGAT...ATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490798.6
ENST00000674318.1
CDS-3UTR GCA 90 bp CTTTTCTGGTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCGTTCATTGTGTCCAGTaGCCGCTCCGCGTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: LFWFQCMYAFGCSIAWCAVHCVQ*PLRVRG
Trigger: CCCGCGGACGCGGAGCGGGCACTGGACACAATGAAC...GGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR GCA 90 bp TTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAGTTCATTGTGTCCAGTaGCCGCTCCGCGTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: LQGLRAESQKHCPFGSHGVHCVQ*PLRVRG
Trigger: CCCGCGGACGCGGAGCGGGCACTGGACACAATGAAC...TCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR GCA 90 bp TGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACCGCCTCAGCCGGTCCTaGTTCATCTGCTCAAACCTG +
Preference number: 4 (lower is better)
Translates to: CYVLLRNICTAGAAGLVYRLSRS*FICSNL
Trigger: CAGGTTTGAGCAGATGAAGCAGGACCGGCTGAGGCG...GTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000490798.6
ENST00000537323.5
CDS-3UTR GCA 90 bp TGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGCTGTTTCTGAGCCGTAGAGTGGCTTGGTaGCCACGATGCGCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: CPDRRVDALSTAPLLFLSRRVAW*PRCARS
Trigger: TGAACGGGCGCATCGTGGGCACCAAGCCACTCTACG...GCTCAGAAACAGCAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR GCA 90 bp TATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCTTTGCGCTGGGCCAGTaGCACGTAGAGTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: YVLLRNICTAGAAGLVYSFALGQ*HVEWLG
Trigger: ACCAAGCCACTCTACGTGGCACTGGCCCAGCGCAAA...GCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000490798.6
ENST00000537323.5
CDS-3UTR GCA 90 bp TTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCCCAGGAGGGGGTTaGTCAGGGTCCGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: LQGLRAESQKHCPFGSHGSPGGG*SGSAWW
Trigger: CCACCATGCGGACCCTGAGCAACCCCCTCCTGGGCT...TCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp ACGCATGATCAGAGGGATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTGGGTATGAGGCACCGTaGGTGGCACCTGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: THDQRDGVTCPDRRVDALGYEAP*VAPGWR
Trigger: CCTCCACCCAGGTGCCACGCACGGTGCCTCATACCC...AAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCTCTGATCATGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR GCA 90 bp GATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGCTGTTTCTGAGCAACCGTCTGCTGAGGAACATTTaGACGGCAGGAGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: DRRVDALSTAPLLFLSNRLLRNI*TAGAAG
Trigger: GCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAG...ACGGTTGCTCAGAAACAGCAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
CDS-3UTR GCA 90 bp GCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGACTGCTGAGGAACATTTaGACGGCAGGAGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: APGPDRCYVLLRNICTAGLLRNI*TAGAAG
Trigger: GCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAG...TCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR GCA 90 bp CTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCCCTGGACCCGATAGGTaGTATGTGCTGCTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LLSWDVHSRLLDPIGAMCPGPDR*YVLLRN
Trigger: GTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGG...GCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR GCA 90 bp GCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCATCTGCTTTTGCTCATaGAGGGGCGCCGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: AQPAPGPDRCYVLLRNICICFCS*RGAAAS
Trigger: GCTGGCTGCGGCGCCCCTGCATGAGCAAAAGCAGAT...GCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR GCA 90 bp GAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGCCAATCATCTGCTTTTaGTCATGCAGGGGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: EHLHGRSGRPGVQHPTPLPIICF*SCRGAA
Trigger: TGCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGG...CAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CCA 90 bp GGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGGTAGCCAGAACCGCTaGCGTTCATGGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GLRAESQKHCPFGSHGSEGSQNR*RSWWAG
Trigger: CCCTGCCCACCATGAACGCCAGCGGTTCTGGCTACC...CTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp TGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACTCAGGGTCCGCATGGTaGAGAGGCGCTGCATGTACT +
Preference number: 4 (lower is better)
Translates to: CYVLLRNICTAGAAGLVYSGSAW*RGAACT
Trigger: AGTACATGCAGCGCCTCTCCACCATGCGGACCCTGA...GTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR CCA 90 bp GTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCTGCAGCACTGCTCAGGGTCCGCATaGTGGAGAGGCGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: VSVHVRLRLLHSLVCLQHCSGSA*WRGAAC
Trigger: ACATGCAGCGCCTCTCCACCATGCGGACCCTGAGCA...GTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp TATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCCAGGCAGGAAGTAGCTaGAGGGCTGCTGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: YVLLRNICTAGAAGLVYSQAGSS*RAAERS
Trigger: GCTCCTTTCAGCAGCCCTCCAGCTACTTCCTGCCTG...GCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR CCA 90 bp CTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCAGGCAGGAAGTAGCTaGAGGGCTGCTGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: LCAAEEHLHGRSGRPGVQQAGSS*RAAERS
Trigger: GCTCCTTTCAGCAGCCCTCCAGCTACTTCCTGCCTG...CTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR CCA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGAGGCACCGTGCGTaGCACCTGGGTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RVCRALGLRARNTVLLAAMRHRA*HLGGGL
Trigger: CAGGCCTCCACCCAGGTGCCACGCACGGTGCCTCAT...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp ACGCATGATCAGAGGGATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTCAGGAGCGGCCGGCCTaGTGTACAGCATCCTACCCC +
Preference number: 4 (lower is better)
Translates to: THDQRDGVTCPDRRVDALQERPA*CTASYP
Trigger: GGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTG...AAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCTCTGATCATGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
CDS-3UTR CCA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCCAGGGGCTCCTGTCCTaGGATGTGCACAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: RVCRALGLRARNTVLLAAQGLLS*DVHSRL
Trigger: GAGCCGGCTGTGCACATCCCAGGACAGGAGCCCCTG...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp ACGCATGATCAGAGGGATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTCAGGGGCTCCTGTCCTaGGATGTGCACAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: THDQRDGVTCPDRRVDALQGLLS*DVHSRL
Trigger: GAGCCGGCTGTGCACATCCCAGGACAGGAGCCCCTG...AAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCTCTGATCATGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
CDS-3UTR CCA 90 bp TTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTATCTTGCCAGCCAGCTaGGTGTGGACATCATGGATA +
Preference number: 4 (lower is better)
Translates to: LHGRSGRPGVQHPTPLGPILPAS*VWTSWI
Trigger: TATCCATGATGTCCACACCCAGCTGGCTGGCAAGAT...AGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CCA 90 bp GCCAAGGGCTACTCTCTGGGTATGAGGCACCGTGCGTGGCACCTGGGTGGAGGCATCTTGCCAGCCAGCTaGGTGTGGACATCATGGATA +
Preference number: 4 (lower is better)
Translates to: AKGYSLGMRHRAWHLGGGILPAS*VWTSWI
Trigger: TATCCATGATGTCCACACCCAGCTGGCTGGCAAGAT...GCCTCCACCCAGGTGCCACGCACGGTGCCTCATACCCAGAGAGTAGCCCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000674244.1
CDS-3UTR CCA 90 bp GGGCTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGCTGCCTCGTCTATCTTaGCATGGAGGGATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GLLSWDVHSRLLDPIGAMLPRLS*HGGILE
Trigger: CTCCAGAATCCCTCCATGCCAAGATAGACGAGGCAG...CATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000537323.5
ENST00000674318.1
CDS-3UTR CCA 90 bp GAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGAGTCTGCCTCGTCTATCTTaGCATGGAGGGATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: ERPAWCTASYPTGSCGLSLPRLS*HGGILE
Trigger: CTCCAGAATCCCTCCATGCCAAGATAGACGAGGCAG...ACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674318.1
CDS-3UTR CCA 90 bp TTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAGGCTGCTCCATAGCCTaGTGTGCCTGCAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: LQGLRAESQKHCPFGSHGGCSIA*CACSTA
Trigger: GGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCC...TCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTTCATCTCACCCCAGCTaGTCTGGAAAAGCTTGTACA +
Preference number: 4 (lower is better)
Translates to: ARQERPAWCTASYPTGSCSSHPS*SGKACT
Trigger: TGTACAAGCTTTTCCAGACCAGCTGGGGTGAGATGA...ACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674318.1
CDS-3UTR CCA 90 bp TGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATTTGGCATCTGGGGCATaGCAGGCAGGAAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: CAAEEHLHGRSGRPGVQHLASGA*QAGSSW
Trigger: CCAGCTACTTCCTGCCTGCCATGCCCCAGATGCCAA...ATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674244.1
CDS-3UTR TCA 90 bp GCTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGGCTCCCGTCGAGACTTaGAGTGACCCACAAAGACTT +
Preference number: 4 (lower is better)
Translates to: APVLGCAQPAPGPDRCYVAPVET*SDPQRL
Trigger: AAGTCTTTGTGGGTCACTTCAAGTCTCGACGGGAGC...CACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537323.5
CDS-3UTR TCA 90 bp AGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATTGGTGGCCGGACCATTaGGGCACCTGGAGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: SLQGLRAESQKHCPFGSHWWPDH*GTWRVG
Trigger: GCCTACCCTCCAGGTGCCTCAATGGTCCGGCCACCA...ATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000476056.6
CDS-3UTR TCA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCGCTACTCTCTGGGTATaGGGCACCGTGCGTGGCACC +
Preference number: 4 (lower is better)
Translates to: RVCRALGLRARNTVLLAAATLWV*GTVRGT
Trigger: GGTGCCACGCACGGTGCCTCATACCCAGAGAGTAGC...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp TGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACGGTGCTATGTGCTGCTaGGGAACATTTGCACGGCAG +
Preference number: 4 (lower is better)
Translates to: CYVLLRNICTAGAAGLVYGAMCC*GTFARQ
Trigger: CTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACC...GTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR TCA 90 bp TTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTTCTGATCAGTCTTCTTaGTCACGAAGAGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LHGRSGRPGVQHPTPLGPSDQSS*SRRELR
Trigger: CCTGAGCTCTCTTCGTGATCAAGAAGACTGATCAGA...AGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674318.1
CDS-3UTR TCA 90 bp TGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGCTGTTTCTGAGCCTGGGTCCTGTGGTCTaGGTACCAATGTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CPDRRVDALSTAPLLFLSLGPVV*VPMLAG
Trigger: CCCAGCCAACATTGGTACTCAGACCACAGGACCCAG...GCTCAGAAACAGCAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR GCA 90 bp CAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCAAACCCCGGGAGCCATaGTCGTCACACGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: QGLRAESQKHCPFGSHGSKPREP*SSHATL
Trigger: CAAGGTGGCGTGTGACGAGCATGGCTCCCGGGGTTT...GCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR GCA 90 bp GAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGCGGTCCTGCTTCATCTaGTCAAACCTGCGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: EHLHGRSGRPGVQHPTPLRSCFI*SNLRFS
Trigger: ACTGAAGCGCAGGTTTGAGCAGATGAAGCAGGACCG...CAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp TTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGACCTTCCGCTCCTCTTTaGGCTGGGCCAGTGCCACGT +
Preference number: 4 (lower is better)
Translates to: LQGLRAESQKHCPFGSHGPSAPL*AGPVPR
Trigger: ACGTGGCACTGGCCCAGCGCAAAGAGGAGCGGAAGG...TCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp AGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGGTATGAGGCACCGTaGGTGGCACCTGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLQGLRAESQKHCPFGSHGYEAP*VAPGWR
Trigger: CCTCCACCCAGGTGCCACGCACGGTGCCTCATACCC...ATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp ACGCATGATCAGAGGGATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTCTGCTGAGGAACATTTaGACGGCAGGAGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: THDQRDGVTCPDRRVDALLLRNI*TAGAAG
Trigger: GCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAG...AAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCTCTGATCATGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
CDS-3UTR GCA 90 bp TGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACCCTGGACCCGATAGGTaGTATGTGCTGCTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: CYVLLRNICTAGAAGLVYPGPDR*YVLLRN
Trigger: GTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGG...GTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR GCA 90 bp TGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACCCAATCATCTGCTTTTaGTCATGCAGGGGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: CYVLLRNICTAGAAGLVYPIICF*SCRGAA
Trigger: TGCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGG...GTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR GCA 90 bp GGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGCTGCCAATCATCTGCTTTTaGTCATGCAGGGGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: GVTCPDRRVDALSTAPLLPIICF*SCRGAA
Trigger: TGCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGG...CAGCAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
CDS-3UTR GCA 90 bp GGGGTTGCTCAGGGTCCGCATGGTGGAGAGGCGCTGCATGTACTGGTTGGTCAACCAATCATCTGCTTTTaGTCATGCAGGGGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: GVAQGPHGGEALHVLVGQPIICF*SCRGAA
Trigger: TGCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGG...TTGACCAACCAGTACATGCAGCGCCTCTCCACCATGCGGACCCTGAGCAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR GCA 90 bp GTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCTGCAGCACCTGCAGCACGGCCACTaGCTCGTCTATCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: VSVHVRLRLLHSLVCLQHLQHGH*LVYLGM
Trigger: CATGCCAAGATAGACGAGGCAGTGGCCGTGCTGCAG...GTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674318.1
CDS-3UTR GCA 90 bp TTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAATAGCCTGGTGTGCCTaGAGCACGGCCACTGCCTCG +
Preference number: 4 (lower is better)
Translates to: LQGLRAESQKHCPFGSHGIAWCA*STATAS
Trigger: CGAGGCAGTGGCCGTGCTGCAGGCACACCAGGCTAT...TCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCCTCCATAGCCTGGTGTaGCTGCAGCACGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: RVCRALGLRARNTVLLAALHSLV*LQHGHC
Trigger: GCAGTGGCCGTGCTGCAGGCACACCAGGCTATGGAG...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GCCCGTGATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGATGTACGCCTTCGGCTaGTCCATAGCCTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: ARDLASQLGVDIMDKGVEMYAFG*SIAWCA
Trigger: GGCACACCAGGCTATGGAGCAGCCGAAGGCGTACAT...CTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATCACGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674318.1
CDS-3UTR GCA 90 bp GCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCATGTACGCCTTCGGCTaGTCCATAGCCTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: AQPAPGPDRCYVLLRNICMYAFG*SIAWCA
Trigger: GGCACACCAGGCTATGGAGCAGCCGAAGGCGTACAT...GCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000537323.5
ENST00000674318.1
CDS-3UTR CCA 90 bp GCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTAACCGCTGGCGTTCATaGTGGGCAGGGGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ARNTVLLAAMEARISFSGNRWRS*WAGGRG
Trigger: GCCCCGGCCCCCTGCCCACCATGAACGCCAGCGGTT...ACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp GAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCCCAGCGAGCGCCGGGTaGCTACATCGCGGCACACGC +
Preference number: 4 (lower is better)
Translates to: ESQKHCPFGSHGSEDFLFPASAG*LHRGTR
Trigger: GCGTGTGCCGCGATGTAGCCACCCGGCGCTCGCTGG...GAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp GCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTCGCTCCACGCGCTTTTaGGCCCGGCCCGCGTACAGC +
Preference number: 4 (lower is better)
Translates to: ARNTVLLAAMEARISFSGRSTRF*ARPAYS
Trigger: GCTGTACGCGGGCCGGGCCCAAAAGCGCGTGGAGCG...ACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp CCTTTTCTGGTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCCACGTAGAGTGGCTTaGTGCCCACGATGCGCCCGT +
Preference number: 4 (lower is better)
Translates to: PFLVSVHVRLRLLHSLVCPRRVA*CPRCAR
Trigger: ACGGGCGCATCGTGGGCACCAAGCCACTCTACGTGG...GCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGAAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GCTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGACTGGTTGGTCAAGATaGCCTTCCGCTCCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: APVLGCAQPAPGPDRCYVTGWSR*PSAPLC
Trigger: GCAAAGAGGAGCGGAAGGCCATCTTGACCAACCAGT...CACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR CCA 90 bp CTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCGCTGCATGTACTGGTTaGTCAAGATGGCCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: LLSWDVHSRLLDPIGAMCAACTG*SRWPSA
Trigger: AGCGGAAGGCCATCTTGACCAACCAGTACATGCAGC...GCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR CCA 90 bp GCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGATGCTCAGGGTCCGCATaGTGGAGAGGCGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: APGPDRCYVLLRNICTAGCSGSA*WRGAAC
Trigger: ACATGCAGCGCCTCTCCACCATGCGGACCCTGAGCA...TCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR CCA 90 bp AGCATGCCCGTGATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGCAGGCAGGAAGTAGCTaGAGGGCTGCTGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SMPVILPASWVWTSWIRGQAGSS*RAAERS
Trigger: GCTCCTTTCAGCAGCCCTCCAGCTACTTCCTGCCTG...CCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATCACGGGCATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR CCA 90 bp TTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTGCTGGGATGTCCACCTaGGGGCAGGCTGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LGLRARNTVLLAAMEARIAGMST*GQAGWV
Trigger: CACCCACCCAGCCTGCCCCCAGGTGGACATCCCAGC...AATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217073.7
ENST00000255136.8
CDS-3UTR CCA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATACCGTGCGTGGCACCTaGGTGGAGGCCTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDTVRGT*VEACLT
Trigger: TGTCAGGCAGGCCTCCACCCAGGTGCCACGCACGGT...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp AGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATATGAGGCACCGTGCGTaGCACCTGGGTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SLQGLRAESQKHCPFGSHMRHRA*HLGGGL
Trigger: CAGGCCTCCACCCAGGTGCCACGCACGGTGCCTCAT...ATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp CTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTaGTCTGAGTACCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: LLRNICTAGAAGLVYSILPHWVL*SEYQCW
Trigger: CCAACATTGGTACTCAGACCACAGGACCCAGTGGGG...TAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CCA 90 bp TGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTaGGTCCTGTGGTCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: CYVLLRNICTAGAAGLVYSILPH*VLWSEY
Trigger: GTACTCAGACCACAGGACCCAGTGGGGTAGGATGCT...GTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CCA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATCAGGAGCGGCCGGCCTaGTGTACAGCATCCTACCCC +
Preference number: 4 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDQERPA*CTASYP
Trigger: GGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTG...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATCAGGGGCTCCTGTCCTaGGATGTGCACAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDQGLLS*DVHSRL
Trigger: GAGCCGGCTGTGCACATCCCAGGACAGGAGCCCCTG...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCATGTTGGCTGGGGCATaGCAGGCAGGAAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: AQPAPGPDRCYVLLRNICMLAGA*QAGSSW
Trigger: CCAGCTACTTCCTGCCTGCCATGCCCCAGCCAACAT...GCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR CCA 90 bp CTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGGTAGACATTGGCATCTaGGGCATGGCAGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LCAAEEHLHGRSGRPGVQVDIGI*GMAGRK
Trigger: CTTCCTGCCTGCCATGCCCCAGATGCCAATGTCTAC...CTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674244.1
CDS-3UTR CCA 90 bp CTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTATTCCGTCTCTGGGCCTaGTTTCAGTGCATGTACGCC +
Preference number: 4 (lower is better)
Translates to: LLRNICTAGAAGLVYSILFRLWA*FQCMYA
Trigger: GGCGTACATGCACTGAAACCAGGCCCAGAGACGGAA...TAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674318.1
CDS-3UTR TCA 90 bp CAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGATGTTGCCCACACCTaGCTTGCGAAGTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: QGLRAESQKHCPFGSHGSDVAHT*LAKSWV
Trigger: GACCCAGGACTTCGCAAGTCAGGTGTGGGCAACATC...GCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR TCA 90 bp CAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCTCCCATTCATGGTGTTaGTGGCCTGCTGTGCGGCCT +
Preference number: 4 (lower is better)
Translates to: QGLRAESQKHCPFGSHGSSHSWC*WPAVRP
Trigger: AGGCCGCACAGCAGGCCATCAACACCATGAATGGGA...GCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR TCA 90 bp GCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGAGTACCAACGTCGAGACTTGAAGTaGCCCACAAAGACTTTGCGG +
Preference number: 4 (lower is better)
Translates to: AGLVYSILPHWVLWSEYQRRDLK*PTKTLR
Trigger: CCGCAAAGTCTTTGTGGGTCACTTCAAGTCTCGACG...TTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537323.5
CDS-3UTR TCA 90 bp TTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTGGTGGCCGGACCATTaGGGCACCTGGAGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: LGLRARNTVLLAAMEARIWWPDH*GTWRVG
Trigger: GCCTACCCTCCAGGTGCCTCAATGGTCCGGCCACCA...AATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000476056.6
CDS-3UTR TCA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATGCTACTCTCTGGGTATaGGGCACCGTGCGTGGCACC +
Preference number: 4 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDATLWV*GTVRGT
Trigger: GGTGCCACGCACGGTGCCTCATACCCAGAGAGTAGC...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp CTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACTGGGTCCTGTGGTCTaGGTACCAATGTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: LLRNICTAGAAGLVYSILLGPVV*VPMLAT
Trigger: AGTAGCCAACATTGGTACTCAGACCACAGGACCCAG...TAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp GCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCGGTGCTATGTGCTGCTaGGGAACATTTGCACGGCAG +
Preference number: 4 (lower is better)
Translates to: AQPAPGPDRCYVLLRNICGAMCC*GTFARQ
Trigger: CTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACC...GCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR TCA 90 bp GCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTCCAGCAGCATGCCCGTaGTCTTGCCAGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AESQKHCPFGSHGSEDFLPAACP*SCQPAG
Trigger: CCCAGCTGGCTGGCAAGATCACGGGCATGCTGCTGG...AAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp GAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGCGTCGAGACTTGAAGTaGCCCACAAAGCTTGCAAGA +
Preference number: 4 (lower is better)
Translates to: EHLHGRSGRPGVQHPTPLRRDLK*PTKLAR
Trigger: TCTTGCAAGCTTTGTGGGTCACTTCAAGTCTCGACG...CAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217074.9
CDS-3UTR TCA 90 bp GGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGAGCTTCCAGCAAGTCTATaGAGTGATATCCTCATGTGG +
Preference number: 4 (lower is better)
Translates to: GAAGLVYSILPHWVLWSELPASL*SDILMW
Trigger: CCACATGAGGATATCACTTCATAGACTTGCTGGAAG...CTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674318.1
CDS-3UTR GCA 90 bp CAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCATGGTGTTGATGGCCTaGTGTGCGGCCTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: QGLRAESQKHCPFGSHGSMVLMA*CAASWV
Trigger: GACCCATGAGGCCGCACAGCAGGCCATCAACACCAT...GCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR GCA 90 bp GCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCCGCTTCAGTTCATTCTaGCGCTCCACGCGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: AQPAPGPDRCYVLLRNICRFSSF*RSTRFW
Trigger: CCAAAAGCGCGTGGAGCGGCAGAATGAACTGAAGCG...GCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
CDS-3UTR GCA 90 bp AGGGATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACGCTTCAGTTCATTCTaGCGCTCCACGCGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: RDGVTCPDRRVDALSTAPRFSSF*RSTRFW
Trigger: CCAAAAGCGCGTGGAGCGGCAGAATGAACTGAAGCG...TGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR GCA 90 bp GATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGCTCCGCCTCAGCCGGTCCTaGTTCATCTGCTCAAACCTG +
Preference number: 4 (lower is better)
Translates to: DLASQLGVDIMDKGVETLRLSRS*FICSNL
Trigger: CAGGTTTGAGCAGATGAAGCAGGACCGGCTGAGGCG...GAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp CCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCACAAAGCCAAACCCCTTaGTGTGGCCACCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: PAPGPDRCYVLLRNICTAQSQTP*CGHPLS
Trigger: TGACAGAGGGTGGCCACAGCAAGGGGTTTGGCTTTG...TGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR GCA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATCCTTCCGCTCCTCTTTaGGCTGGGCCAGTGCCACGT +
Preference number: 4 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDPSAPL*AGPVPR
Trigger: ACGTGGCACTGGCCCAGCGCAAAGAGGAGCGGAAGG...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp AGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATCTGCTGAGGAACATTTaGACGGCAGGAGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: SLQGLRAESQKHCPFGSHLLRNI*TAGAAG
Trigger: GCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAG...ATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp AGGGATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACCTGGACCCGATAGGTaGTATGTGCTGCTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: RDGVTCPDRRVDALSTAPPGPDR*YVLLRN
Trigger: GTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGG...TGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
CDS-3UTR GCA 90 bp GCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGCTCCCCAATCCTGGACCCGATAGGTaGTATGTGCTGCTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: ASQLGVDIMDKGVETLPNPGPDR*YVLLRN
Trigger: GTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGG...ATTGGGGAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR GCA 90 bp AGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATATAGCCTGGTGTGCCTaGAGCACGGCCACTGCCTCG +
Preference number: 4 (lower is better)
Translates to: SLQGLRAESQKHCPFGSHIAWCA*STATAS
Trigger: CGAGGCAGTGGCCGTGCTGCAGGCACACCAGGCTAT...ATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp AGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATCTCCATAGCCTGGTGTaGCTGCAGCACGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: SLQGLRAESQKHCPFGSHLHSLV*LQHGHC
Trigger: GCAGTGGCCGTGCTGCAGGCACACCAGGCTATGGAG...ATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGCTTTTCTGGTTTCAGTaGATGTACGCCTTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: EHLHGRSGRPGVQHPTPLLFWFQ*MYAFGC
Trigger: GCAGCCGAAGGCGTACATGCACTGAAACCAGAAAAG...CAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp TTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGACCAAAGCACCGCGAGTaGCCGCTGTTGTCCCTCATC +
Preference number: 4 (lower is better)
Translates to: LQGLRAESQKHCPFGSHGPKHRE*PLLSLI
Trigger: GATGAGGGACAACAGCGGCCACTCGCGGTGCTTTGG...TCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCCCAAAGCACCGCGAGTaGCCGCTGTTGTCCCTCATC +
Preference number: 4 (lower is better)
Translates to: RVCRALGLRARNTVLLAAPKHRE*PLLSLI
Trigger: GATGAGGGACAACAGCGGCCACTCGCGGTGCTTTGG...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp CTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGCTCCCCAATCATCTGCTTCCACGTAGAGTGGCTTaGTGCCCACGATGCGCCCGT +
Preference number: 4 (lower is better)
Translates to: LGVDIMDKGVETLPNHLLPRRVA*CPRCAR
Trigger: ACGGGCGCATCGTGGGCACCAAGCCACTCTACGTGG...AAGCAGATGATTGGGGAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CCA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCCAGTGCCACGTAGAGTaGCTTGGTGCCCACGATGCG +
Preference number: 4 (lower is better)
Translates to: RVCRALGLRARNTVLLAAQCHVE*LGAHDA
Trigger: CGCATCGTGGGCACCAAGCCACTCTACGTGGCACTG...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GGGGTTGCTCAGGGTCCGCATGGTGGAGAGGCGCTGCATGTACTGGTTGGTCAAGCTGCATGTACTGGTTaGTCAAGATGGCCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: GVAQGPHGGEALHVLVGQAACTG*SRWPSA
Trigger: AGCGGAAGGCCATCTTGACCAACCAGTACATGCAGC...TTGACCAACCAGTACATGCAGCGCCTCTCCACCATGCGGACCCTGAGCAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CCA 90 bp TATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCAGGCGCTGCATGTACTaGTTGGTCAAGATGGCCTTC +
Preference number: 4 (lower is better)
Translates to: YVLLRNICTAGAAGLVYSRRCMY*LVKMAF
Trigger: GAAGGCCATCTTGACCAACCAGTACATGCAGCGCCT...GCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR CCA 90 bp GCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGATCAGGGTCCGCATGGTaGAGAGGCGCTGCATGTACT +
Preference number: 4 (lower is better)
Translates to: APGPDRCYVLLRNICTAGSGSAW*RGAACT
Trigger: AGTACATGCAGCGCCTCTCCACCATGCGGACCCTGA...TCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR CCA 90 bp TTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGATGCTCAGGGTCCGCATaGTGGAGAGGCGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: LQGLRAESQKHCPFGSHGCSGSA*WRGAAC
Trigger: ACATGCAGCGCCTCTCCACCATGCGGACCCTGAGCA...TCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCGAAGGTCTAGGTGGCTaGGATGTCCACCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: RVCRALGLRARNTVLLAAEGLGG*DVHLGA
Trigger: TGCCCCCAGGTGGACATCCCAGCCACCTAGACCTTC...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217073.7
ENST00000255136.8
CDS-3UTR CCA 90 bp TTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTACCGTGCGTGGCACCTaGGTGGAGGCCTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: LGLRARNTVLLAAMEARITVRGT*VEACLT
Trigger: TGTCAGGCAGGCCTCCACCCAGGTGCCACGCACGGT...AATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp TTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTATGAGGCACCGTGCGTaGCACCTGGGTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LGLRARNTVLLAAMEARIMRHRA*HLGGGL
Trigger: CAGGCCTCCACCCAGGTGCCACGCACGGTGCCTCAT...AATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp CCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCACCCCACTGGGTCCTGTaGTCTGAGTACCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: PAPGPDRCYVLLRNICTAPHWVL*SEYQCW
Trigger: CCAACATTGGTACTCAGACCACAGGACCCAGTGGGG...TGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CCA 90 bp CTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCATCTTGCCAGCCAGCTaGGTGTGGACATCATGGATA +
Preference number: 4 (lower is better)
Translates to: LLSWDVHSRLLDPIGAMCILPAS*VWTSWI
Trigger: TATCCATGATGTCCACACCCAGCTGGCTGGCAAGAT...GCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CCA 90 bp TGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCTGCCTCGTCTATCTTaGCATGGAGGGATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: CAAEEHLHGRSGRPGVQHLPRLS*HGGILE
Trigger: CTCCAGAATCCCTCCATGCCAAGATAGACGAGGCAG...ATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674318.1
CDS-3UTR CCA 90 bp TGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGCTGTTTCTGAGCTCCTCATGTGGTAGGTaGGCACGCATGATCAGAGGG +
Preference number: 4 (lower is better)
Translates to: CPDRRVDALSTAPLLFLSSSCGR*ARMIRG
Trigger: CCCTCTGATCATGCGTGCCCACCTACCACATGAGGA...GCTCAGAAACAGCAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
CDS-3UTR CCA 90 bp CCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGTCCTCATGTGGTAGGTaGGCACGCATGATCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PGPDRCYVLLRNICTAGASSCGR*ARMIRG
Trigger: CCCTCTGATCATGCGTGCCCACCTACCACATGAGGA...CGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490798.6
ENST00000674318.1
CDS-3UTR CCA 90 bp CCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCAAGTACCAATGTTGGCTaGGGCATGGCAGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PAPGPDRCYVLLRNICTASTNVG*GMAGRK
Trigger: CTTCCTGCCTGCCATGCCCCAGCCAACATTGGTACT...TGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR CCA 90 bp GATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGTCTGAGTACCAATGTTaGCTGGGGCATGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: DGVTCPDRRVDALSTAPLSEYQC*LGHGRQ
Trigger: CTGCCTGCCATGCCCCAGCCAACATTGGTACTCAGA...CAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR TCA 90 bp TTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCACGTAGATGTTGGTaGACTCCAGGGCCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: LGLRARNTVLLAAMEARISRRCW*TPGPAP
Trigger: GGGCGCGGGCCCTGGAGTTCACCAACATCTACGTGA...AATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR TCA 90 bp TTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTGCTACTCTCTGGGTATaGGGCACCGTGCGTGGCACC +
Preference number: 4 (lower is better)
Translates to: LGLRARNTVLLAAMEARIATLWV*GTVRGT
Trigger: GGTGCCACGCACGGTGCCTCATACCCAGAGAGTAGC...AATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp CAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGGTGCTATGTGCTGCTaGGGAACATTTGCACGGCAG +
Preference number: 4 (lower is better)
Translates to: QGLRAESQKHCPFGSHGSGAMCC*GTFARQ
Trigger: CTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACC...GCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp CGTGATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGGGTGCTATGTGCTGCTaGGGAACATTTGCACGGCAG +
Preference number: 4 (lower is better)
Translates to: RDLASQLGVDIMDKGVETGAMCC*GTFARQ
Trigger: CTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACC...CGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR TCA 90 bp CACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCAGTGCCCAGCAGCATGCCCGTaGTCTTGCCAGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HCPFGSHGSEDFLFWFQCPAACP*SCQPAG
Trigger: CCCAGCTGGCTGGCAAGATCACGGGCATGCTGCTGG...GCACTGAAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp AAGCTAGCCTGGTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGCCCAGCAGCATGCCCGTaGTCTTGCCAGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KLAWYLDLARTGVWFCCCPAACP*SCQPAG
Trigger: CCCAGCTGGCTGGCAAGATCACGGGCATGCTGCTGG...GCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATACCAGGCTAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR GCA 90 bp CTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTGTTCATTGTGTCCAGTaGCCGCTCCGCGTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: LRARNTVLLAAMEARISFVHCVQ*PLRVRG
Trigger: CCCGCGGACGCGGAGCGGGCACTGGACACAATGAAC...AAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR GCA 90 bp CAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGTTGATGGCCTGCTGTaGGGCCTCATGGGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: QGLRAESQKHCPFGSHGSVDGLL*GLMGLK
Trigger: TTTGAGACCCATGAGGCCGCACAGCAGGCCATCAAC...GCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR GCA 90 bp GATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGCTCCGCTTCAGTTCATTCTaGCGCTCCACGCGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: DLASQLGVDIMDKGVETLRFSSF*RSTRFW
Trigger: CCAAAAGCGCGTGGAGCGGCAGAATGAACTGAAGCG...GAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp CCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGCGGTCCTGCTTCATCTaGTCAAACCTGCGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PGPDRCYVLLRNICTAGARSCFI*SNLRFS
Trigger: ACTGAAGCGCAGGTTTGAGCAGATGAAGCAGGACCG...CGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
CDS-3UTR GCA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCTTTGCGCTGGGCCAGTaGCACGTAGAGTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: RVCRALGLRARNTVLLAAFALGQ*HVEWLG
Trigger: ACCAAGCCACTCTACGTGGCACTGGCCCAGCGCAAA...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp TTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTCCTTCCGCTCCTCTTTaGGCTGGGCCAGTGCCACGT +
Preference number: 4 (lower is better)
Translates to: LGLRARNTVLLAAMEARIPSAPL*AGPVPR
Trigger: ACGTGGCACTGGCCCAGCGCAAAGAGGAGCGGAAGG...AATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp AGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGCCACAGCCATAGTATaGAGCCTGGGCTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SLQGLRAESQKHCPFGSHATAIV*SLGWRL
Trigger: CAGCCTCCAGCCCAGGCTGCATACTATGGCTGTGGC...ATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217073.7
ENST00000255136.8
CDS-3UTR GCA 90 bp GAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGGGTATGAGGCACCGTaGGTGGCACCTGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: EPETLSFWQPWKRGFPFLGYEAP*VAPGWR
Trigger: CCTCCACCCAGGTGCCACGCACGGTGCCTCATACCC...CAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGACCTGGACCCGATAGGTaGTATGTGCTGCTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: APGPDRCYVLLRNICTAGPGPDR*YVLLRN
Trigger: GTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGG...TCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR GCA 90 bp AGGGATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCATCTGGGCCAATCATCTaGTTTTGCTCATGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RDGVTCPDRRVDALSTAPSGPII*FCSCRG
Trigger: GCCCCTGCATGAGCAAAAGCAGATGATTGGCCCAGA...TGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR CCA 90 bp TGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACTGCTGTGCGGCCTCATaGGTCTCAAAATGGACAAAG +
Preference number: 4 (lower is better)
Translates to: CYVLLRNICTAGAAGLVYCCAAS*VSKWTK
Trigger: CTTTGTCCATTTTGAGACCCATGAGGCCGCACAGCA...GTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537323.5
CDS-3UTR CCA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATCCAAAGCACCGCGAGTaGCCGCTGTTGTCCCTCATC +
Preference number: 4 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDPKHRE*PLLSLI
Trigger: GATGAGGGACAACAGCGGCCACTCGCGGTGCTTTGG...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp GGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGAGGTTTGTCGTCATCAATaGAGTCGTCCAGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: GAAGLVYSILPHWVLWSEVCRHQ*SRPDSS
Trigger: TGAAGAATCTGGACGACTCCATTGATGACGACAAAC...CTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTCCACGTAGAGTGGCTTaGTGCCCACGATGCGCCCGT +
Preference number: 4 (lower is better)
Translates to: AESQKHCPFGSHGSEDFLPRRVA*CPRCAR
Trigger: ACGGGCGCATCGTGGGCACCAAGCCACTCTACGTGG...AAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCTGCAGCACACTGGTTGGTCAAGATaGCCTTCCGCTCCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: VSVHVRLRLLHSLVCLQHTGWSR*PSAPLC
Trigger: GCAAAGAGGAGCGGAAGGCCATCTTGACCAACCAGT...GTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGCTCCCCAATAGGCGCTGCATGTACTaGTTGGTCAAGATGGCCTTC +
Preference number: 4 (lower is better)
Translates to: ASQLGVDIMDKGVETLPNRRCMY*LVKMAF
Trigger: GAAGGCCATCTTGACCAACCAGTACATGCAGCGCCT...ATTGGGGAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000537323.5
ENST00000674244.1
CDS-3UTR CCA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCTCAGGGTCCGCATGGTaGAGAGGCGCTGCATGTACT +
Preference number: 4 (lower is better)
Translates to: RVCRALGLRARNTVLLAASGSAW*RGAACT
Trigger: AGTACATGCAGCGCCTCTCCACCATGCGGACCCTGA...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTGCTCAGGGTCCGCATaGTGGAGAGGCGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDCSGSA*WRGAAC
Trigger: ACATGCAGCGCCTCTCCACCATGCGGACCCTGAGCA...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp TTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGACTGGGTGGGTGTCACTaGGCCACAGCCATAGTATGC +
Preference number: 4 (lower is better)
Translates to: LQGLRAESQKHCPFGSHGLGGCH*ATAIVC
Trigger: GCATACTATGGCTGTGGCCCAGTGACACCCACCCAG...TCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217073.7
ENST00000255136.8
CDS-3UTR CCA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATGAAGGTCTAGGTGGCTaGGATGTCCACCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDEGLGG*DVHLGA
Trigger: TGCCCCCAGGTGGACATCCCAGCCACCTAGACCTTC...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217073.7
ENST00000255136.8
CDS-3UTR CCA 90 bp TTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGAGGAAGGTCTAGGTaGCTGGGATGTCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: LQGLRAESQKHCPFGSHGRGRSR*LGCPPG
Trigger: CCCAGGTGGACATCCCAGCCACCTAGACCTTCCTCT...TCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217073.7
CDS-3UTR CCA 90 bp GAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCATGAGGCACCGTGCGTaGCACCTGGGTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: ESQKHCPFGSHGSEDFLFMRHRA*HLGGGL
Trigger: CAGGCCTCCACCCAGGTGCCACGCACGGTGCCTCAT...GAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGCCCCACTGGGTCCTGTaGTCTGAGTACCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: GLRAESQKHCPFGSHGSEPHWVL*SEYQCW
Trigger: CCAACATTGGTACTCAGACCACAGGACCCAGTGGGG...CTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGCTCCCCCACTGGGTCCTGTaGTCTGAGTACCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: DLASQLGVDIMDKGVETLPHWVL*SEYQCW
Trigger: CCAACATTGGTACTCAGACCACAGGACCCAGTGGGG...GAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CCA 90 bp TGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATTCGTCTATCTTGGCATaGAGGGATTCTGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: CAAEEHLHGRSGRPGVQHSSILA*RDSGDS
Trigger: GGAGTCTCCAGAATCCCTCCATGCCAAGATAGACGA...ATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674318.1
CDS-3UTR CCA 90 bp GTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCTGCAGCACGGCCACGAGGATTTCCTTTTCTaGTTTCAGTGCATGTACGCC +
Preference number: 4 (lower is better)
Translates to: VHVRLRLLHSLVCLQHGHEDFLF*FQCMYA
Trigger: GGCGTACATGCACTGAAACCAGAAAAGGAAATCCTC...GTGGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp TTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAACAGGAAGGTCTAGGTaGCTGGGATGTCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: LQGLRAESQKHCPFGSHGTGRSR*LGCPPG
Trigger: CCCAGGTGGACATCCCAGCCACCTAGACCTTCCTGT...TCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255136.8
CDS-3UTR TCA 90 bp GGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGCGTCGAGACTTGAAGTaGCCCACAAAGACTTTGCGG +
Preference number: 4 (lower is better)
Translates to: GLRAESQKHCPFGSHGSERRDLK*PTKTLR
Trigger: CCGCAAAGTCTTTGTGGGTCACTTCAAGTCTCGACG...CTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR TCA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCGGTGCTATGTGCTGCTaGGGAACATTTGCACGGCAG +
Preference number: 4 (lower is better)
Translates to: RVCRALGLRARNTVLLAAGAMCC*GTFARQ
Trigger: CTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACC...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp TGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGCTGTTTCTGAGCGCAACCGTACTCTGGTaGCTCAAGATGGATTACAGG +
Preference number: 4 (lower is better)
Translates to: CPDRRVDALSTAPLLFLSATVLW*LKMDYR
Trigger: CCTGTAATCCATCTTGAGTCACCAGAGTACGGTTGC...GCTCAGAAACAGCAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
CDS-3UTR GCA 90 bp GCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTAAACCCCGGGAGCCATaGTCGTCACACGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: AESQKHCPFGSHGSEDFLKPREP*SSHATL
Trigger: CAAGGTGGCGTGTGACGAGCATGGCTCCCGGGGTTT...AAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR GCA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATATGGTGTTGATGGCCTaGTGTGCGGCCTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDMVLMA*CAASWV
Trigger: GACCCATGAGGCCGCACAGCAGGCCATCAACACCAT...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR GCA 90 bp GAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGAGGTCCTGCAGGCCTTaGTCGTCCACATCCACCGGG +
Preference number: 4 (lower is better)
Translates to: EPETLSFWQPWKRGFPFLRSCRP*SSTSTG
Trigger: CCCGGTGGATGTGGACGAGCAAGGCCTGCAGGACCT...CAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR GCA 90 bp CCTTTTCTGGTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCAAAGCCAAACCCCTTaGTGTGGCCACCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: PFLVSVHVRLRLLHSLVCQSQTP*CGHPLS
Trigger: TGACAGAGGGTGGCCACAGCAAGGGGTTTGGCTTTG...GCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476056.6
CDS-3UTR GCA 90 bp AGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGCTTGGTGCCCACGATaGGCCCGTTCATCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SLQGLRAESQKHCPFGSHAWCPR*ARSSLS
Trigger: TGACAGAGATGAACGGGCGCATCGTGGGCACCAAGC...ATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATGCTTGGTGCCCACGATaGGCCCGTTCATCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDAWCPR*ARSSLS
Trigger: TGACAGAGATGAACGGGCGCATCGTGGGCACCAAGC...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp AGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATTTTGCGCTGGGCCAGTaGCACGTAGAGTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: SLQGLRAESQKHCPFGSHFALGQ*HVEWLG
Trigger: ACCAAGCCACTCTACGTGGCACTGGCCCAGCGCAAA...ATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp CTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGCTCCCCAATCATCTGCTTTTTGCGCTGGGCCAGTaGCACGTAGAGTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LGVDIMDKGVETLPNHLLFALGQ*HVEWLG
Trigger: ACCAAGCCACTCTACGTGGCACTGGCCCAGCGCAAA...AAGCAGATGATTGGGGAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR GCA 90 bp TTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTATCTGCTTTTGCTCATaGAGGGGCGCCGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LGLRARNTVLLAAMEARIICFCS*RGAAAS
Trigger: GCTGGCTGCGGCGCCCCTGCATGAGCAAAAGCAGAT...AATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp TTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGACCAATCATCTGCTTTTaGTCATGCAGGGGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: LQGLRAESQKHCPFGSHGPIICF*SCRGAA
Trigger: TGCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGG...TCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR GCA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATCTGCAGCACGGCCACTaGCTCGTCTATCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDLQHGH*LVYLGM
Trigger: CATGCCAAGATAGACGAGGCAGTGGCCGTGCTGCAG...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp CTACCCCACTGGGTCCTGTGGTCTGAGTACCAATGTTGGATGAGGTACCAAGCACTGCAGCACGGCCACTaGCTCGTCTATCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: LPHWVLWSEYQCWMRYQALQHGH*LVYLGM
Trigger: CATGCCAAGATAGACGAGGCAGTGGCCGTGCTGCAG...TGCTTGGTACCTCATCCAACATTGGTACTCAGACCACAGGACCCAGTGGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000674318.1
CDS-3UTR GCA 90 bp GCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTATAGCCTGGTGTGCCTaGAGCACGGCCACTGCCTCG +
Preference number: 4 (lower is better)
Translates to: ARNTVLLAAMEARISFSGIAWCA*STATAS
Trigger: CGAGGCAGTGGCCGTGCTGCAGGCACACCAGGCTAT...ACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTCTCCATAGCCTGGTGTaGCTGCAGCACGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: ARNTVLLAAMEARISFSGLHSLV*LQHGHC
Trigger: GCAGTGGCCGTGCTGCAGGCACACCAGGCTATGGAG...ACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp TGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATGTGACCCACAAAGCTTaGAAGAGAGGATGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: CAAEEHLHGRSGRPGVQHVTHKA*KRGCSQ
Trigger: TTGGGAACATCCTCTCTTGCAAGCTTTGTGGGTCAC...ATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217074.9
CDS-3UTR CCA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAAACCGCTGGCGTTCATaGTGGGCAGGGGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLNRWRS*WAGGRG
Trigger: GCCCCGGCCCCCTGCCCACCATGAACGCCAGCGGTT...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp GAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGGTAGCCAGAACCGCTaGCGTTCATGGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: EPETLSFWQPWKRGFPFLGSQNR*RSWWAG
Trigger: CCCTGCCCACCATGAACGCCAGCGGTTCTGGCTACC...CAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp GGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGAGTCCTGGGTCTCGCTaGGACCACATGATGCGAATA +
Preference number: 4 (lower is better)
Translates to: GLRAESQKHCPFGSHGSESPGSR*DHMMRI
Trigger: TATTCGCATCATGTGGTCCCAGCGAGACCCAGGACT...CTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp CGTGATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGAGTCCTGGGTCTCGCTaGGACCACATGATGCGAATA +
Preference number: 4 (lower is better)
Translates to: RDLASQLGVDIMDKGVETSPGSR*DHMMRI
Trigger: TATTCGCATCATGTGGTCCCAGCGAGACCCAGGACT...CGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CCA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTACGCTCCACGCGCTTTTaGGCCCGGCCCGCGTACAGC +
Preference number: 4 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLRSTRF*ARPAYS
Trigger: GCTGTACGCGGGCCGGGCCCAAAAGCGCGTGGAGCG...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTCCACGTAGAGTGGCTTaGTGCCCACGATGCGCCCGT +
Preference number: 4 (lower is better)
Translates to: ARNTVLLAAMEARISFSGPRRVA*CPRCAR
Trigger: ACGGGCGCATCGTGGGCACCAAGCCACTCTACGTGG...ACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp TTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTCAGTGCCACGTAGAGTaGCTTGGTGCCCACGATGCG +
Preference number: 4 (lower is better)
Translates to: LGLRARNTVLLAAMEARIQCHVE*LGAHDA
Trigger: CGCATCGTGGGCACCAAGCCACTCTACGTGGCACTG...AATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGCTGTTTCTGAGCAACCGTACTGGTTGGTCAAGATaGCCTTCCGCTCCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: DRRVDALSTAPLLFLSNRTGWSR*PSAPLC
Trigger: GCAAAGAGGAGCGGAAGGCCATCTTGACCAACCAGT...ACGGTTGCTCAGAAACAGCAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR CCA 90 bp GCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTTCTGAGTACCAATGTTaGCTACTCTCTGGGTATGAG +
Preference number: 4 (lower is better)
Translates to: AAEEHLHGRSGRPGVQHPSEYQC*LLSGYE
Trigger: CTCATACCCAGAGAGTAGCCAACATTGGTACTCAGA...AGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp TTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTGATGTTGCCCACACCTaGCTTGCGAAGTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LGLRARNTVLLAAMEARIDVAHT*LAKSWV
Trigger: GACCCAGGACTTCGCAAGTCAGGTGTGGGCAACATC...AATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR TCA 90 bp CAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCCATGCTTCTCAAAGTTaGCAAAGCCAAAGCACCGCG +
Preference number: 4 (lower is better)
Translates to: QGLRAESQKHCPFGSHGSHASQS*QSQSTA
Trigger: CGCGGTGCTTTGGCTTTGTCAACTTTGAGAAGCATG...GCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR TCA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATGGTGGCCGGACCATTaGGGCACCTGGAGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVWWPDH*GTWRVG
Trigger: GCCTACCCTCCAGGTGCCTCAATGGTCCGGCCACCA...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000476056.6
CDS-3UTR TCA 90 bp CTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGCTACAGATTTCCTAGGGCTACTCTCTGGGTATaGGGCACCGTGCGTGGCACC +
Preference number: 4 (lower is better)
Translates to: LDLARTGVWFCCCYRFPRATLWV*GTVRGT
Trigger: GGTGCCACGCACGGTGCCTCATACCCAGAGAGTAGC...CCTAGGAAATCTGTAGCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR TCA 90 bp TTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGACTGGGTCCTGTGGTCTaGGTACCAATGTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: LQGLRAESQKHCPFGSHGLGPVV*VPMLAT
Trigger: AGTAGCCAACATTGGTACTCAGACCACAGGACCCAG...TCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTACCAGCAGCATGCCCGTaGTCTTGCCAGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVPAACP*SCQPAG
Trigger: CCCAGCTGGCTGGCAAGATCACGGGCATGCTGCTGG...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000372822.2
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp TATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCCTTCCAGCAAGTCTATaGAGTGATATCCTCATGTGG +
Preference number: 4 (lower is better)
Translates to: YVLLRNICTAGAAGLVYSLPASL*SDILMW
Trigger: CCACATGAGGATATCACTTCATAGACTTGCTGGAAG...GCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490798.6
ENST00000674318.1
CDS-3UTR GCA 90 bp CCTTTTCTGGTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCGGTCCTGCTTCATCTaGTCAAACCTGCGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PFLVSVHVRLRLLHSLVCRSCFI*SNLRFS
Trigger: ACTGAAGCGCAGGTTTGAGCAGATGAAGCAGGACCG...GCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp TTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTCGCCTCAGCCGGTCCTaGTTCATCTGCTCAAACCTG +
Preference number: 4 (lower is better)
Translates to: LGLRARNTVLLAAMEARIRLSRS*FICSNL
Trigger: CAGGTTTGAGCAGATGAAGCAGGACCGGCTGAGGCG...AATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCAAGCCCAGGAGGGGGTTaGTCAGGGTCCGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: ETLSFWQPWKRGFPFLVSSPGGG*SGSAWW
Trigger: CCACCATGCGGACCCTGAGCAACCCCCTCCTGGGCT...TGAAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCATCTGCTTTTGCTCATaGAGGGGCGCCGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: ESQKHCPFGSHGSEDFLFICFCS*RGAAAS
Trigger: GCTGGCTGCGGCGCCCCTGCATGAGCAAAAGCAGAT...GAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGATCTGCTTTTGCTCATaGAGGGGCGCCGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: EPETLSFWQPWKRGFPFLICFCS*RGAAAS
Trigger: GCTGGCTGCGGCGCCCCTGCATGAGCAAAAGCAGAT...CAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp CAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCCTTTTCTGGTTTCAGTaGATGTACGCCTTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: QGLRAESQKHCPFGSHGSLFWFQ*MYAFGC
Trigger: GCAGCCGAAGGCGTACATGCACTGAAACCAGAAAAG...GCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp CGTGATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGCTTTTCTGGTTTCAGTaGATGTACGCCTTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: RDLASQLGVDIMDKGVETLFWFQ*MYAFGC
Trigger: GCAGCCGAAGGCGTACATGCACTGAAACCAGAAAAG...CGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGACCGGAGTTTGGTTCTaGTGCTGCTACAGATTTCCT +
Preference number: 4 (lower is better)
Translates to: DGVTCPDRRVDALSTAPLTGVWF*CCYRFP
Trigger: AGGAAATCTGTAGCAGCAGCAGAACCAAACTCCGGT...CAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR GCA 90 bp CTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCATGCTGGATAATCTGTaGCTGTTTTGGAGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: LLSWDVHSRLLDPIGAMCMLDNL*LFWRVS
Trigger: TGAGACTCTCCAAAACAGGCACAGATTATCCAGCAT...GCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674244.1
CDS-3UTR GCA 90 bp CGTGATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGACCTTACCCGATAGGTaGTATGTGCTGCTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: RDLASQLGVDIMDKGVETTLPDR*YVLLRN
Trigger: GTTCCTCAGCAGCACATAGCACCTATCGGGTAAGGT...CGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476056.6
CDS-3UTR CCA 90 bp TATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATGATGCGAATAGGCTaGCCTTTGAGCATCTCAAAG +
Preference number: 4 (lower is better)
Translates to: YVLLRNICTAGAAGLVYSMMRIG*PLSISK
Trigger: CTTTGAGATGCTCAAAGGCCAGCCTATTCGCATCAT...GCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CCA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCAGTCCTGGGTCTCGCTaGGACCACATGATGCGAATA +
Preference number: 4 (lower is better)
Translates to: RVCRALGLRARNTVLLAASPGSR*DHMMRI
Trigger: TATTCGCATCATGTGGTCCCAGCGAGACCCAGGACT...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp CAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCAGCATTTTCCCAAACTaGGAGAAGAGGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QGLRAESQKHCPFGSHGSSIFPN*EKRSCR
Trigger: CCTGCAGGACCTCTTCTCCCAGTTTGGGAAAATGCT...GCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp GCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGAGTACCAACTTTGTCGCCTCTTCTaGGGAGGAAAAACACACAAA +
Preference number: 4 (lower is better)
Translates to: AGLVYSILPHWVLWSEYQLCRLF*GGKTHK
Trigger: TTTGTGTGTTTTTCCTCCCCAGAAGAGGCGACAAAG...TTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476056.6
CDS-3UTR CCA 90 bp CTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCTTTGTCGCCTCTTCTaGGGAGGAAAAACACACAAA +
Preference number: 4 (lower is better)
Translates to: LCAAEEHLHGRSGRPGVQLCRLF*GGKTHK
Trigger: TTTGTGTGTTTTTCCTCCCCAGAAGAGGCGACAAAG...CTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476056.6
ENST00000490798.6
CDS-3UTR CCA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCACTGGTTGGTCAAGATaGCCTTCCGCTCCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: RVCRALGLRARNTVLLAATGWSR*PSAPLC
Trigger: GCAAAGAGGAGCGGAAGGCCATCTTGACCAACCAGT...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp AGGGTTGATGCCCTTTCCACCGCACCACTGCTGTTTCTGAGCAACCGTACTCTGGCTGCATGTACTGGTTaGTCAAGATGGCCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: RVDALSTAPLLFLSNRTLAACTG*SRWPSA
Trigger: AGCGGAAGGCCATCTTGACCAACCAGTACATGCAGC...CAGAGTACGGTTGCTCAGAAACAGCAGTGGTGCGGTGGAAAGGGCATCAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR CCA 90 bp TTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGGCGCTGCATGTACTaGTTGGTCAAGATGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LQGLRAESQKHCPFGSHGRRCMY*LVKMAF
Trigger: GAAGGCCATCTTGACCAACCAGTACATGCAGCGCCT...TCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTAGTATGCAGCCTGGGCTaGAGGCTGGGGCATGGCAGG +
Preference number: 4 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVVCSLG*RLGHGR
Trigger: CCTGCCATGCCCCAGCCTCCAGCCCAGGCTGCATAC...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217073.7
ENST00000255136.8
CDS-3UTR CCA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATAGCATCCTACCCCACTaGGTCCTGTGGTCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDSILPH*VLWSEY
Trigger: GTACTCAGACCACAGGACCCAGTGGGGTAGGATGCT...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTACAGGAGCGGCCGGCCTaGTGTACAGCATCCTACCCC +
Preference number: 4 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVQERPA*CTASYP
Trigger: GGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTG...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp CGTGATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGATCTTGCCAGCCAGCTaGGTGTGGACATCATGGATA +
Preference number: 4 (lower is better)
Translates to: RDLASQLGVDIMDKGVETILPAS*VWTSWI
Trigger: TATCCATGATGTCCACACCCAGCTGGCTGGCAAGAT...CGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CCA 90 bp CGTGATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGTCGTCTATCTTGGCATaGAGGGATTCTGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: RDLASQLGVDIMDKGVETSSILA*RDSGDS
Trigger: GGAGTCTCCAGAATCCCTCCATGCCAAGATAGACGA...CGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674318.1
CDS-3UTR CCA 90 bp GGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGAGACGCTCCCCTGTGTaGAACACCTTCAATCATCTG +
Preference number: 4 (lower is better)
Translates to: GLRAESQKHCPFGSHGSERRSPV*NTFNHL
Trigger: CAGATGATTGAAGGTGTTCCACACAGGGGAGCGTCT...CTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476056.6
CDS-3UTR CCA 90 bp CTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCAGTGCATGAGGCACCTGGGGCATaGCAGGCAGGAAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSFWQPWKRGFPFLVSVHEAPGA*QAGSSW
Trigger: CCAGCTACTTCCTGCCTGCCATGCCCCAGGTGCCTC...ATGCACTGAAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537323.5
CDS-3UTR TCA 90 bp GAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGATGTTGCCCACACCTaGCTTGCGAAGTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: EPETLSFWQPWKRGFPFLDVAHT*LAKSWV
Trigger: GACCCAGGACTTCGCAAGTCAGGTGTGGGCAACATC...CAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR TCA 90 bp TTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGACATGCTTCTCAAAGTTaGCAAAGCCAAAGCACCGCG +
Preference number: 4 (lower is better)
Translates to: LQGLRAESQKHCPFGSHGHASQS*QSQSTA
Trigger: CGCGGTGCTTTGGCTTTGTCAACTTTGAGAAGCATG...TCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR TCA 90 bp AGAAAAGCTAGCCTGGTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGGCTACTCTCTGGGTATaGGGCACCGTGCGTGGCACC +
Preference number: 4 (lower is better)
Translates to: RKASLVSRFSKDRSLVLLATLWV*GTVRGT
Trigger: GGTGCCACGCACGGTGCCTCATACCCAGAGAGTAGC...CAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATACCAGGCTAGCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR TCA 90 bp GCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTGGTGCTATGTGCTGCTaGGGAACATTTGCACGGCAG +
Preference number: 4 (lower is better)
Translates to: AESQKHCPFGSHGSEDFLGAMCC*GTFARQ
Trigger: CTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACC...AAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp TGGTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGCTACAGATTTCCAGCAGCATGCCCGTaGTCTTGCCAGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: WYLDLARTGVWFCCCYRFPAACP*SCQPAG
Trigger: CCCAGCTGGCTGGCAAGATCACGGGCATGCTGCTGG...AAATCTGTAGCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR TCA 90 bp GCCCGTGATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGAATAGGCTGGATGGGTaGCCAACCTTCATTCACATA +
Preference number: 4 (lower is better)
Translates to: ARDLASQLGVDIMDKGVENRLDG*PTFIHI
Trigger: TATGTGAATGAAGGTTGGTCACCCATCCAGCCTATT...CTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATCACGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp ACGCATGATCAGAGGGATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTGCAACCGTACTCTGGTaGCTCAAGATGGATTACAGG +
Preference number: 4 (lower is better)
Translates to: THDQRDGVTCPDRRVDALATVLW*LKMDYR
Trigger: CCTGTAATCCATCTTGAGTCACCAGAGTACGGTTGC...AAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCTCTGATCATGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
CDS-3UTR TCA 90 bp TGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATAGCAAGTCTATGAAGTaGTATCCTCATGTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: CAAEEHLHGRSGRPGVQHSKSMK*YPHVVG
Trigger: ACCTACCACATGAGGATATCACTTCATAGACTTGCT...ATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490798.6
ENST00000674318.1
CDS-3UTR TCA 90 bp CCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGTGGCCTTTAATGGGTaGCATCTTTCTACTTCCTGT +
Preference number: 4 (lower is better)
Translates to: PGPDRCYVLLRNICTAGAVAFNG*HLSTSC
Trigger: ACAGGAAGTAGAAAGATGTCACCCATTAAAGGCCAC...CGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674244.1
CDS-3UTR GCA 90 bp TTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTCGCTTCAGTTCATTCTaGCGCTCCACGCGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: LGLRARNTVLLAAMEARIRFSSF*RSTRFW
Trigger: CCAAAAGCGCGTGGAGCGGCAGAATGAACTGAAGCG...AATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp AGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATCGGTCCTGCTTCATCTaGTCAAACCTGCGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SLQGLRAESQKHCPFGSHRSCFI*SNLRFS
Trigger: ACTGAAGCGCAGGTTTGAGCAGATGAAGCAGGACCG...ATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp CTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTCGCCTCAGCCGGTCCTaGTTCATCTGCTCAAACCTG +
Preference number: 4 (lower is better)
Translates to: LRARNTVLLAAMEARISFRLSRS*FICSNL
Trigger: CAGGTTTGAGCAGATGAAGCAGGACCGGCTGAGGCG...AAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGCTTGGTGCCCACGATaGGCCCGTTCATCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: EPETLSFWQPWKRGFPFLAWCPR*ARSSLS
Trigger: TGACAGAGATGAACGGGCGCATCGTGGGCACCAAGC...CAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTACCTTCCGCTCCTCTTTaGGCTGGGCCAGTGCCACGT +
Preference number: 4 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVPSAPL*AGPVPR
Trigger: ACGTGGCACTGGCCCAGCGCAAAGAGGAGCGGAAGG...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAGGGTATGAGGCACCGTaGGTGGCACCTGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLGYEAP*VAPGWR
Trigger: CCTCCACCCAGGTGCCACGCACGGTGCCTCATACCC...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCATGTACGCCTTCGGCTaGTCCATAGCCTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: ESQKHCPFGSHGSEDFLFMYAFG*SIAWCA
Trigger: GGCACACCAGGCTATGGAGCAGCCGAAGGCGTACAT...GAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp TGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGCTGTTTCTGAGCTTCAAGCCACTCCTTTaGCCCCTTCTTTGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: CPDRRVDALSTAPLLFLSFKPLL*PLLCSR
Trigger: TCTAGAACAAAGAAGGGGGCAAAGGAGTGGCTTGAA...GCTCAGAAACAGCAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674318.1
CDS-3UTR CCA 90 bp AGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATAGTCCTGGGTCTCGCTaGGACCACATGATGCGAATA +
Preference number: 4 (lower is better)
Translates to: SLQGLRAESQKHCPFGSHSPGSR*DHMMRI
Trigger: TATTCGCATCATGTGGTCCCAGCGAGACCCAGGACT...ATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp GCTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGGGATGTTCCCAAAGGTaGAGAAGGTATCATATAAAG +
Preference number: 4 (lower is better)
Translates to: APVLGCAQPAPGPDRCYVGCSQR*RRYHIK
Trigger: CTTTATATGATACCTTCTCCACCTTTGGGAACATCC...CACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CCA 90 bp TTCCTTTTCTGGTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTTCCTTCCCGTTCATATaGACCACGGCCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: FLFWFQCMYAFGCSIAWCSFPFI*TTAFWA
Trigger: AGCCCAGAAGGCCGTGGTCCATATGAACGGGAAGGA...ACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGAAAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CCA 90 bp TATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCGTTTGTCGTCATCAATaGAGTCGTCCAGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: YVLLRNICTAGAAGLVYSVCRHQ*SRPDSS
Trigger: TGAAGAATCTGGACGACTCCATTGATGACGACAAAC...GCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000490798.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCCAGGCAGGAAGTAGCTaGAGGGCTGCTGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: ESQKHCPFGSHGSEDFLFQAGSS*RAAERS
Trigger: GCTCCTTTCAGCAGCCCTCCAGCTACTTCCTGCCTG...GAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGCTGGGTGGGTGTCACTaGGCCACAGCCATAGTATGC +
Preference number: 4 (lower is better)
Translates to: EPETLSFWQPWKRGFPFLLGGCH*ATAIVC
Trigger: GCATACTATGGCTGTGGCCCAGTGACACCCACCCAG...CAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217073.7
ENST00000255136.8
CDS-3UTR CCA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAACCGTGCGTGGCACCTaGGTGGAGGCCTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLTVRGT*VEACLT
Trigger: TGTCAGGCAGGCCTCCACCCAGGTGCCACGCACGGT...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp TGGTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGCTACAGATTTATGAGGCACCGTGCGTaGCACCTGGGTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: WYLDLARTGVWFCCCYRFMRHRA*HLGGGL
Trigger: CAGGCCTCCACCCAGGTGCCACGCACGGTGCCTCAT...AAATCTGTAGCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR CCA 90 bp AGGGATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCATCTGAGTACCAATGTTaGCTACTCTCTGGGTATGAG +
Preference number: 4 (lower is better)
Translates to: RDGVTCPDRRVDALSTAPSEYQC*LLSGYE
Trigger: CTCATACCCAGAGAGTAGCCAACATTGGTACTCAGA...TGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372826.6
CDS-3UTR CCA 90 bp TTCCTTTTCTGGTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTCCCCACTGGGTCCTGTaGTCTGAGTACCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: FLFWFQCMYAFGCSIAWCPHWVL*SEYQCW
Trigger: CCAACATTGGTACTCAGACCACAGGACCCAGTGGGG...ACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGAAAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTAGCATCCTACCCCACTaGGTCCTGTGGTCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: AESQKHCPFGSHGSEDFLSILPH*VLWSEY
Trigger: GTACTCAGACCACAGGACCCAGTGGGGTAGGATGCT...AAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GCAAGTCTCTTGATTTATCTGATCAGTCTTCTTGATCACGAAGAGAGCTCAGGGCAGGAGCGGCCGGCCTaGTGTACAGCATCCTACCCC +
Preference number: 4 (lower is better)
Translates to: ASLLIYLISLLDHEESSGQERPA*CTASYP
Trigger: GGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTG...CCCTGAGCTCTCTTCGTGATCAAGAAGACTGATCAGATAAATCAAGAGACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR CCA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATCTTGCCAGCCAGCTaGGTGTGGACATCATGGATA +
Preference number: 4 (lower is better)
Translates to: RVCRALGLRARNTVLLAAILPAS*VWTSWI
Trigger: TATCCATGATGTCCACACCCAGCTGGCTGGCAAGAT...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCTCGTCTATCTTGGCATaGAGGGATTCTGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: RVCRALGLRARNTVLLAASSILA*RDSGDS
Trigger: GGAGTCTCCAGAATCCCTCCATGCCAAGATAGACGA...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp TTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGATCGTCTATCTTGGCATaGAGGGATTCTGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: LQGLRAESQKHCPFGSHGSSILA*RDSGDS
Trigger: GGAGTCTCCAGAATCCCTCCATGCCAAGATAGACGA...TCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp AGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATCTGCCTCGTCTATCTTaGCATGGAGGGATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SLQGLRAESQKHCPFGSHLPRLS*HGGILE
Trigger: CTCCAGAATCCCTCCATGCCAAGATAGACGAGGCAG...ATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GCTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGATGGATTACAGGTTTTaGGTACTTAGCTCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: APVLGCAQPAPGPDRCYVMDYRF*VLSSLR
Trigger: CCTTAAGGAGCTAAGTACCCAAAACCTGTAATCCAT...CACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490798.6
ENST00000674318.1
CDS-3UTR CCA 90 bp TGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGCTGTTTCTGAGCTCACCCCAGCTGGTCTaGAAAAGCTTGTACATTTGT +
Preference number: 4 (lower is better)
Translates to: CPDRRVDALSTAPLLFLSSPQLV*KSLYIC
Trigger: ACAAATGTACAAGCTTTTCCAGACCAGCTGGGGTGA...GCTCAGAAACAGCAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR TCA 90 bp TTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTGCTCCCGTCGAGACTTaGAGTGACCCACAAAGACTT +
Preference number: 4 (lower is better)
Translates to: LGLRARNTVLLAAMEARIAPVET*SDPQRL
Trigger: AAGTCTTTGTGGGTCACTTCAAGTCTCGACGGGAGC...AATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR TCA 90 bp TTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTCTGGGTCCTGTGGTCTaGGTACCAATGTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: LGLRARNTVLLAAMEARILGPVV*VPMLAT
Trigger: AGTAGCCAACATTGGTACTCAGACCACAGGACCCAG...AATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp TCACAGAGACAAAGTAGAATGGCAGTTGCCAAGGGCTACTCTCTGGGTATGAGGGGTGCTATGTGCTGCTaGGGAACATTTGCACGGCAG +
Preference number: 4 (lower is better)
Translates to: SQRQSRMAVAKGYSLGMRGAMCC*GTFARQ
Trigger: CTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACC...CCTCATACCCAGAGAGTAGCCCTTGGCAACTGCCATTCTACTTTGTCTCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000674244.1
CDS-3UTR TCA 90 bp GATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGCTCAATAGGCTGGATGGGTaGCCAACCTTCATTCACATA +
Preference number: 4 (lower is better)
Translates to: DLASQLGVDIMDKGVETLNRLDG*PTFIHI
Trigger: TATGTGAATGAAGGTTGGTCACCCATCCAGCCTATT...GAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp AGGGATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCAAGCAAGTCTATGAAGTaGTATCCTCATGTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: RDGVTCPDRRVDALSTAPSKSMK*YPHVVG
Trigger: ACCTACCACATGAGGATATCACTTCATAGACTTGCT...TGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
CDS-3UTR TCA 90 bp GATCAGAGGGATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCAACAGGCTAACACAATaGACCCTTCCAGCAAGTCTA +
Preference number: 4 (lower is better)
Translates to: DQRDGVTCPDRRVDALSTNRLTQ*TLPASL
Trigger: TAGACTTGCTGGAAGGGTTCATTGTGTTAGCCTGTT...GGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCTCTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
CDS-3UTR GCA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTAAAACCCCGGGAGCCATaGTCGTCACACGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVKPREP*SSHATL
Trigger: CAAGGTGGCGTGTGACGAGCATGGCTCCCGGGGTTT...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR GCA 90 bp CCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGTTCTGGGCTTCCTCATaGTTCTCAAAGTTGACAAAG +
Preference number: 4 (lower is better)
Translates to: PGPDRCYVLLRNICTAGAFWASS*FSKLTK
Trigger: CTTTGTCAACTTTGAGAAGCATGAGGAAGCCCAGAA...CGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR GCA 90 bp GAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCCGCTTCAGTTCATTCTaGCGCTCCACGCGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: ESQKHCPFGSHGSEDFLFRFSSF*RSTRFW
Trigger: CCAAAAGCGCGTGGAGCGGCAGAATGAACTGAAGCG...GAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp CTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTCAAAGCCAAACCCCTTaGTGTGGCCACCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LRARNTVLLAAMEARISFQSQTP*CGHPLS
Trigger: TGACAGAGGGTGGCCACAGCAAGGGGTTTGGCTTTG...AAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000476056.6
CDS-3UTR GCA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTACGTAGAGTGGCTTGGTaGCCACGATGCGCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVRRVAW*PRCARS
Trigger: TGAACGGGCGCATCGTGGGCACCAAGCCACTCTACG...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCACGTAGAGTGGCTTGGTaGCCACGATGCGCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: ETLSFWQPWKRGFPFLVSRRVAW*PRCARS
Trigger: TGAACGGGCGCATCGTGGGCACCAAGCCACTCTACG...TGAAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAGCCCAGGAGGGGGTTaGTCAGGGTCCGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGSPGGG*SGSAWW
Trigger: CCACCATGCGGACCCTGAGCAACCCCCTCCTGGGCT...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp AACAGTCAAATTCACAGAGACAAAGTAGAATGGCAGTTGCCAAGGGCTACTCTCCTGCTGAGGAACATTTaGACGGCAGGAGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: NSQIHRDKVEWQLPRATLLLRNI*TAGAAG
Trigger: GCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAG...GAGAGTAGCCCTTGGCAACTGCCATTCTACTTTGTCTCTGTGAATTTGACTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000674244.1
CDS-3UTR GCA 90 bp TGGTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGCTACAGATTTCTGCTGAGGAACATTTaGACGGCAGGAGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: WYLDLARTGVWFCCCYRFLLRNI*TAGAAG
Trigger: GCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAG...AAATCTGTAGCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR GCA 90 bp GAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGCCTGGACCCGATAGGTaGTATGTGCTGCTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: EPETLSFWQPWKRGFPFLPGPDR*YVLLRN
Trigger: GTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGG...CAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR GCA 90 bp GCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTCCTGGACCCGATAGGTaGTATGTGCTGCTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: ARNTVLLAAMEARISFSGPGPDR*YVLLRN
Trigger: GTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGG...ACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR GCA 90 bp TACTCCATAGGGAGAGAACTCTTTCCTCAGTTTGTCGTCATCAATGGAGTCGTCATCTGCTTTTGCTCATaGAGGGGCGCCGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: YSIGRELFPQFVVINGVVICFCS*RGAAAS
Trigger: GCTGGCTGCGGCGCCCCTGCATGAGCAAAAGCAGAT...GACGACTCCATTGATGACGACAAACTGAGGAAAGAGTTCTCTCCCTATGGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217074.9
CDS-3UTR GCA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTAATCTGCTTTTGCTCATaGAGGGGCGCCGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVICFCS*RGAAAS
Trigger: GCTGGCTGCGGCGCCCCTGCATGAGCAAAAGCAGAT...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000372822.2
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTACTCCATAGCCTGGTGTaGCTGCAGCACGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLLHSLV*LQHGHC
Trigger: GCAGTGGCCGTGCTGCAGGCACACCAGGCTATGGAG...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp AGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATCTTTTCTGGTTTCAGTaGATGTACGCCTTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SLQGLRAESQKHCPFGSHLFWFQ*MYAFGC
Trigger: GCAGCCGAAGGCGTACATGCACTGAAACCAGAAAAG...ATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp CAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCATGATGCGAATAGGCTaGCCTTTGAGCATCTCAAAG +
Preference number: 4 (lower is better)
Translates to: QGLRAESQKHCPFGSHGSMMRIG*PLSISK
Trigger: CTTTGAGATGCTCAAAGGCCAGCCTATTCGCATCAT...GCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTCATGGGTCTCAAAATaGACAAAGCCGAAACCCCGG +
Preference number: 4 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDSWVSK*TKPKPR
Trigger: CCGGGGTTTCGGCTTTGTCCATTTTGAGACCCATGA...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTGCTGTGCGGCCTCATaGGTCTCAAAATGGACAAAG +
Preference number: 4 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDCCAAS*VSKWTK
Trigger: CTTTGTCCATTTTGAGACCCATGAGGCCGCACAGCA...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp AGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATAGCATTTTCCCAAACTaGGAGAAGAGGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLQGLRAESQKHCPFGSHSIFPN*EKRSCR
Trigger: CCTGCAGGACCTCTTCTCCCAGTTTGGGAAAATGCT...ATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATAGCATTTTCCCAAACTaGGAGAAGAGGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDSIFPN*EKRSCR
Trigger: CCTGCAGGACCTCTTCTCCCAGTTTGGGAAAATGCT...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp GAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGTCCTTCCCGTTCATATaGACCACGGCCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: EPETLSFWQPWKRGFPFLSFPFI*TTAFWA
Trigger: AGCCCAGAAGGCCGTGGTCCATATGAACGGGAAGGA...CAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp GATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGGTTTGTCGTCATCAATaGAGTCGTCCAGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: DGVTCPDRRVDALSTAPLVCRHQ*SRPDSS
Trigger: TGAAGAATCTGGACGACTCCATTGATGACGACAAAC...CAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR CCA 90 bp GGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGCTTTGTCGCCTCTTCTaGGGAGGAAAAACACACAAA +
Preference number: 4 (lower is better)
Translates to: GLRAESQKHCPFGSHGSELCRLF*GGKTHK
Trigger: TTTGTGTGTTTTTCCTCCCCAGAAGAGGCGACAAAG...CTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000476056.6
CDS-3UTR CCA 90 bp GCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTGCTGCATGTACTGGTTaGTCAAGATGGCCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: AESQKHCPFGSHGSEDFLAACTG*SRWPSA
Trigger: AGCGGAAGGCCATCTTGACCAACCAGTACATGCAGC...AAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATGCTCAGGGTCCGCATaGTGGAGAGGCGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVCSGSA*WRGAAC
Trigger: ACATGCAGCGCCTCTCCACCATGCGGACCCTGAGCA...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp CTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCAGTGCATCAGGCAGGAAGTAGCTaGAGGGCTGCTGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: LSFWQPWKRGFPFLVSVHQAGSS*RAAERS
Trigger: GCTCCTTTCAGCAGCCCTCCAGCTACTTCCTGCCTG...ATGCACTGAAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGACCGTGCGTGGCACCTaGGTGGAGGCCTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGTVRGT*VEACLT
Trigger: TGTCAGGCAGGCCTCCACCCAGGTGCCACGCACGGT...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGATGAGGCACCGTGCGTaGCACCTGGGTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGMRHRA*HLGGGL
Trigger: CAGGCCTCCACCCAGGTGCCACGCACGGTGCCTCAT...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGCAGGGGCTCCTGTCCTaGGATGTGCACAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGQGLLS*DVHSRL
Trigger: GAGCCGGCTGTGCACATCCCAGGACAGGAGCCCCTG...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000372822.2
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTCGTCTATCTTGGCATaGAGGGATTCTGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDSSILA*RDSGDS
Trigger: GGAGTCTCCAGAATCCCTCCATGCCAAGATAGACGA...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGCTGATGGATTACAGGTTTTaGGTACTTAGCTCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: GVTCPDRRVDALSTAPLLMDYRF*VLSSLR
Trigger: CCTTAAGGAGCTAAGTACCCAAAACCTGTAATCCAT...CAGCAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
CDS-3UTR CCA 90 bp TGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGCTGTTTCTGAGCTCTGGTGACTCAAGATaGATTACAGGTTTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: CPDRRVDALSTAPLLFLSSGDSR*ITGFGY
Trigger: GTACCCAAAACCTGTAATCCATCTTGAGTCACCAGA...GCTCAGAAACAGCAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
CDS-3UTR CCA 90 bp CTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGCTACAGATTTCCTAGGTCCGTCTCTGGGCCTTaGCATGGAGGGATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LDLARTGVWFCCCYRFPRSVSGP*HGGILE
Trigger: CTCCAGAATCCCTCCATGCCAAGGCCCAGAGACGGA...CCTAGGAAATCTGTAGCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372826.6
CDS-3UTR TCA 90 bp GAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGCGTCGAGACTTGAAGTaGCCCACAAAGACTTTGCGG +
Preference number: 4 (lower is better)
Translates to: EPETLSFWQPWKRGFPFLRRDLK*PTKTLR
Trigger: CCGCAAAGTCTTTGTGGGTCACTTCAAGTCTCGACG...CAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR TCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGGCTACTCTCTGGGTATaGGGCACCGTGCGTGGCACC +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGATLWV*GTVRGT
Trigger: GGTGCCACGCACGGTGCCTCATACCCAGAGAGTAGC...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp AAGCTAGCCTGGTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGCCTGGGTCCTGTGGTCTaGGTACCAATGTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: KLAWYLDLARTGVWFCCCLGPVV*VPMLAT
Trigger: AGTAGCCAACATTGGTACTCAGACCACAGGACCCAG...GCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATACCAGGCTAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372826.6
CDS-3UTR TCA 90 bp AAGCTAGCCTGGTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGCCTGGGTCCTGTGGTCTaGGTACCAATGTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: KLAWYLDLARTGVWFCCCLGPVV*VPMLDE
Trigger: CTCATCCAACATTGGTACTCAGACCACAGGACCCAG...GCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATACCAGGCTAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674318.1
CDS-3UTR TCA 90 bp AGAAAAGCTAGCCTGGTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGATCAGAGGGATGGAGTaGCTTGTCCGGATCGCAGGG +
Preference number: 4 (lower is better)
Translates to: RKASLVSRFSKDRSLVLLIRGME*LVRIAG
Trigger: CCCTGCGATCCGGACAAGTCACTCCATCCCTCTGAT...CAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATACCAGGCTAGCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR GCA 90 bp AATGAACCCTTCCAGCAAGTCTATGAAGTGATATCCTCATGTGGTAGGTGGGCAGCTTGGTGCCCACGATaGGCCCGTTCATCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: NEPFQQVYEVISSCGRWAAWCPR*ARSSLS
Trigger: TGACAGAGATGAACGGGCGCATCGTGGGCACCAAGC...TGCCCACCTACCACATGAGGATATCACTTCATAGACTTGCTGGAAGGGTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR GCA 90 bp GAGCAACCGTACTCTGGTGACTCAAGATGGATTACAGGTTTTGGGTACTTAGCTTTTGCGCTGGGCCAGTaGCACGTAGAGTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: EQPYSGDSRWITGFGYLAFALGQ*HVEWLG
Trigger: ACCAAGCCACTCTACGTGGCACTGGCCCAGCGCAAA...AGCTAAGTACCCAAAACCTGTAATCCATCTTGAGTCACCAGAGTACGGTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR GCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGCTGCTGAGGAACATTTaGACGGCAGGAGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGLLRNI*TAGAAG
Trigger: GCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAG...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp TGGTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGCTACAGATTTATCTGCTTTTGCTCATaGAGGGGCGCCGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: WYLDLARTGVWFCCCYRFICFCS*RGAAAS
Trigger: GCTGGCTGCGGCGCCCCTGCATGAGCAAAAGCAGAT...AAATCTGTAGCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR GCA 90 bp AGCAAGAACAGTCAAATTCACAGAGACAAAGTAGAATGGCAGTTGCCAAGGGCTATCTGCTTTTGCTCATaGAGGGGCGCCGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SKNSQIHRDKVEWQLPRAICFCS*RGAAAS
Trigger: GCTGGCTGCGGCGCCCCTGCATGAGCAAAAGCAGAT...AGCCCTTGGCAACTGCCATTCTACTTTGTCTCTGTGAATTTGACTGTTCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000674244.1
CDS-3UTR GCA 90 bp TCAGTTTGTCGTCATCAATGGAGTCGTCCAGATTCTTCACATACAAGTTCACACATAGCCTGGTGTGCCTaGAGCACGGCCACTGCCTCG +
Preference number: 4 (lower is better)
Translates to: SVCRHQWSRPDSSHTSSHIAWCA*STATAS
Trigger: CGAGGCAGTGGCCGTGCTGCAGGCACACCAGGCTAT...GTGTGAACTTGTATGTGAAGAATCTGGACGACTCCATTGATGACGACAAACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217074.9
CDS-3UTR GCA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTAATGTACGCCTTCGGCTaGTCCATAGCCTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVMYAFG*SIAWCA
Trigger: GGCACACCAGGCTATGGAGCAGCCGAAGGCGTACAT...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp CTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCAATCATCTGCTTTTaGTCATGCAGGGGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: LRARNTVLLAAMEARISFSIICF*SCRGAA
Trigger: TGCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGA...AAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000476056.6
CDS-3UTR CCA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGATGCGAATAGGCTaGCCTTTGAGCATCTCAAAG +
Preference number: 4 (lower is better)
Translates to: RVCRALGLRARNTVLLAAMMRIG*PLSISK
Trigger: CTTTGAGATGCTCAAAGGCCAGCCTATTCGCATCAT...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTACAGTGCCACGTAGAGTaGCTTGGTGCCCACGATGCG +
Preference number: 4 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLQCHVE*LGAHDA
Trigger: CGCATCGTGGGCACCAAGCCACTCTACGTGGCACTG...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGACTGGTTGGTCAAGATaGCCTTCCGCTCCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: EPETLSFWQPWKRGFPFLTGWSR*PSAPLC
Trigger: GCAAAGAGGAGCGGAAGGCCATCTTGACCAACCAGT...CAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGCTGCATGTACTGGTTaGTCAAGATGGCCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: EPETLSFWQPWKRGFPFLAACTG*SRWPSA
Trigger: AGCGGAAGGCCATCTTGACCAACCAGTACATGCAGC...CAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp CACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCAGTGCAGGCGCTGCATGTACTaGTTGGTCAAGATGGCCTTC +
Preference number: 4 (lower is better)
Translates to: HCPFGSHGSEDFLFWFQCRRCMY*LVKMAF
Trigger: GAAGGCCATCTTGACCAACCAGTACATGCAGCGCCT...GCACTGAAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp AATGAACCCTTCCAGCAAGTCTATGAAGTGATATCCTCATGTGGTAGGTGGGCACAGGCAGGAAGTAGCTaGAGGGCTGCTGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: NEPFQQVYEVISSCGRWAQAGSS*RAAERS
Trigger: GCTCCTTTCAGCAGCCCTCCAGCTACTTCCTGCCTG...TGCCCACCTACCACATGAGGATATCACTTCATAGACTTGCTGGAAGGGTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR CCA 90 bp TGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGTATGCAGCCTGGGCTaGAGGCTGGGGCATGGCAGG +
Preference number: 4 (lower is better)
Translates to: WVTNLHSHTEPKYRYRLIVCSLG*RLGHGR
Trigger: CCTGCCATGCCCCAGCCTCCAGCCCAGGCTGCATAC...AATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217073.7
ENST00000255136.8
CDS-3UTR CCA 90 bp GAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGCTGCCTCGTCTATCTTaGCATGGAGGGATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: EPETLSFWQPWKRGFPFLLPRLS*HGGILE
Trigger: CTCCAGAATCCCTCCATGCCAAGATAGACGAGGCAG...CAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCAATCTGTGCCTGTTTTaGAGAGTCTCAGTAGACATT +
Preference number: 4 (lower is better)
Translates to: AQPAPGPDRCYVLLRNICNLCLF*RVSVDI
Trigger: AATGTCTACTGAGACTCTCCAAAACAGGCACAGATT...GCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674244.1
CDS-3UTR TCA 90 bp CTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTCATGCTTCTCAAAGTTaGCAAAGCCAAAGCACCGCG +
Preference number: 4 (lower is better)
Translates to: LRARNTVLLAAMEARISFHASQS*QSQSTA
Trigger: CGCGGTGCTTTGGCTTTGTCAACTTTGAGAAGCATG...AAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR TCA 90 bp ACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAAACCAGCAGCATGCCCGTaGTCTTGCCAGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TNLHSHTEPKYRYRLIGKPAACP*SCQPAG
Trigger: CCCAGCTGGCTGGCAAGATCACGGGCATGCTGCTGG...TTTCCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000372822.2
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATAATAGGCTGGATGGGTaGCCAACCTTCATTCACATA +
Preference number: 4 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDNRLDG*PTFIHI
Trigger: TATGTGAATGAAGGTTGGTCACCCATCCAGCCTATT...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp GATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGCTGTTTCTGAGCAACCGTAAGAAGCTGAGGTATTaGTGTTGCTGCCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: DRRVDALSTAPLLFLSNRKKLRY*CCCHFH
Trigger: ATGAAAATGGCAGCAACATCAATACCTCAGCTTCTT...ACGGTTGCTCAGAAACAGCAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674318.1
CDS-3UTR GCA 90 bp TGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTAGGTCCTGCAGGCCTTaGTCGTCCACATCCACCGGG +
Preference number: 4 (lower is better)
Translates to: WVTNLHSHTEPKYRYRLIRSCRP*SSTSTG
Trigger: CCCGGTGGATGTGGACGAGCAAGGCCTGCAGGACCT...AATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR GCA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTACGCCTCAGCCGGTCCTaGTTCATCTGCTCAAACCTG +
Preference number: 4 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLRLSRS*FICSNL
Trigger: CAGGTTTGAGCAGATGAAGCAGGACCGGCTGAGGCG...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGCGTAGAGTGGCTTGGTaGCCACGATGCGCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGRRVAW*PRCARS
Trigger: TGAACGGGCGCATCGTGGGCACCAAGCCACTCTACG...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp ACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAAAGGGTATGAGGCACCGTaGGTGGCACCTGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TNLHSHTEPKYRYRLIGKGYEAP*VAPGWR
Trigger: CCTCCACCCAGGTGCCACGCACGGTGCCTCATACCC...TTTCCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp TGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTCTGCTGAGGAACATTTaGACGGCAGGAGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: WVTNLHSHTEPKYRYRLILLRNI*TAGAAG
Trigger: GCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAG...AATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTACCAATCATCTGCTTTTaGTCATGCAGGGGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVPIICF*SCRGAA
Trigger: TGCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGG...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000372822.2
ENST00000537323.5
CDS-3UTR GCA 90 bp CTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTCTTTTCTGGTTTCAGTaGATGTACGCCTTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LRARNTVLLAAMEARISFLFWFQ*MYAFGC
Trigger: GCAGCCGAAGGCGTACATGCACTGAAACCAGAAAAG...AAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp CTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGCTCCCCAATCATCTGCTTTCTAAGCTGGGGAAATaGTGGATAATCTGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: LGVDIMDKGVETLPNHLLSKLGK*WIICAC
Trigger: ACAGGCACAGATTATCCAGCATTTCCCCAGCTTAGA...AAGCAGATGATTGGGGAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674244.1
CDS-3UTR CCA 90 bp GGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGGATGTTCCCAAAGGTaGAGAAGGTATCATATAAAG +
Preference number: 4 (lower is better)
Translates to: GLRAESQKHCPFGSHGSEGCSQR*RRYHIK
Trigger: CTTTATATGATACCTTCTCCACCTTTGGGAACATCC...CTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp GCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTCATGGGTCTCAAAATaGACAAAGCCGAAACCCCGG +
Preference number: 4 (lower is better)
Translates to: ARNTVLLAAMEARISFSGSWVSK*TKPKPR
Trigger: CCGGGGTTTCGGCTTTGTCCATTTTGAGACCCATGA...ACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp GAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGTGCTGTGCGGCCTCATaGGTCTCAAAATGGACAAAG +
Preference number: 4 (lower is better)
Translates to: EPETLSFWQPWKRGFPFLCCAAS*VSKWTK
Trigger: CTTTGTCCATTTTGAGACCCATGAGGCCGCACAGCA...CAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp AATGAACCCTTCCAGCAAGTCTATGAAGTGATATCCTCATGTGGTAGGTGGGCAAGCATCCTACCCCACTaGGTCCTGTGGTCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: NEPFQQVYEVISSCGRWASILPH*VLWSEY
Trigger: GTACTCAGACCACAGGACCCAGTGGGGTAGGATGCT...TGCCCACCTACCACATGAGGATATCACTTCATAGACTTGCTGGAAGGGTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
CDS-3UTR CCA 90 bp GTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGCTACAGATTTCCAGCATCCTACCCCACTaGGTCCTGTGGTCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: VSRFSKDRSLVLLLLQISSILPH*VLWSEY
Trigger: GTACTCAGACCACAGGACCCAGTGGGGTAGGATGCT...GGAAATCTGTAGCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR CCA 90 bp ACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAAACAGGGGCTCCTGTCCTaGGATGTGCACAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: TNLHSHTEPKYRYRLIGKQGLLS*DVHSRL
Trigger: GAGCCGGCTGTGCACATCCCAGGACAGGAGCCCCTG...TTTCCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000372822.2
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp CTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTATCTTGCCAGCCAGCTaGGTGTGGACATCATGGATA +
Preference number: 4 (lower is better)
Translates to: LRARNTVLLAAMEARISFILPAS*VWTSWI
Trigger: TATCCATGATGTCCACACCCAGCTGGCTGGCAAGAT...AAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGTCGTCTATCTTGGCATaGAGGGATTCTGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: EPETLSFWQPWKRGFPFLSSILA*RDSGDS
Trigger: GGAGTCTCCAGAATCCCTCCATGCCAAGATAGACGA...CAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATGAGGATTTCCTTTTCTaGTTTCAGTGCATGTACGCC +
Preference number: 4 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDEDFLF*FQCMYA
Trigger: GGCGTACATGCACTGAAACCAGAAAAGGAAATCCTC...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp AGAAAAGCTAGCCTGGTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGTCCTCATGTGGTAGGTaGGCACGCATGATCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RKASLVSRFSKDRSLVLLSSCGR*ARMIRG
Trigger: CCCTCTGATCATGCGTGCCCACCTACCACATGAGGA...CAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATACCAGGCTAGCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR CCA 90 bp TGGTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGCTACAGATTTCTCTGGGCCTTGGCATaGAGGGATTCTGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: WYLDLARTGVWFCCCYRFLWALA*RDSGDS
Trigger: GGAGTCTCCAGAATCCCTCCATGCCAAGGCCCAGAG...AAATCTGTAGCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372826.6
CDS-3UTR CCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGTGCACAGCCGGCTCCTaGACCTTACCCGATAGGTGC +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGCTAGS*TLPDRC
Trigger: GCACCTATCGGGTAAGGTCCAGGAGCCGGCTGTGCA...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476056.6
CDS-3UTR TCA 90 bp ACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAAATCACGTAGATGTTGGTaGACTCCAGGGCCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: TNLHSHTEPKYRYRLIGKSRRCW*TPGPAP
Trigger: GGGCGCGGGCCCTGGAGTTCACCAACATCTACGTGA...TTTCCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR TCA 90 bp ACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAAAGCTACTCTCTGGGTATaGGGCACCGTGCGTGGCACC +
Preference number: 4 (lower is better)
Translates to: TNLHSHTEPKYRYRLIGKATLWV*GTVRGT
Trigger: GGTGCCACGCACGGTGCCTCATACCCAGAGAGTAGC...TTTCCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAGGTGCTATGTGCTGCTaGGGAACATTTGCACGGCAG +
Preference number: 4 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLGAMCC*GTFARQ
Trigger: CTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACC...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp TGGTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGCTACAGATTTGGTGCTATGTGCTGCTaGGGAACATTTGCACGGCAG +
Preference number: 4 (lower is better)
Translates to: WYLDLARTGVWFCCCYRFGAMCC*GTFARQ
Trigger: CTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACC...AAATCTGTAGCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR GCA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAGTTGATGGCCTGCTGTaGGGCCTCATGGGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLVDGLL*GLMGLK
Trigger: TTTGAGACCCATGAGGCCGCACAGCAGGCCATCAAC...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR GCA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTACCTGGACCCGATAGGTaGTATGTGCTGCTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLPGPDR*YVLLRN
Trigger: GTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGG...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000372822.2
ENST00000537323.5
CDS-3UTR GCA 90 bp TGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTATCTGCTTTTGCTCATaGAGGGGCGCCGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: WVTNLHSHTEPKYRYRLIICFCS*RGAAAS
Trigger: GCTGGCTGCGGCGCCCCTGCATGAGCAAAAGCAGAT...AATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000372822.2
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTACCAATCATCTGCTTTTaGTCATGCAGGGGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLPIICF*SCRGAA
Trigger: TGCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGG...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000372822.2
ENST00000537323.5
CDS-3UTR GCA 90 bp GCAAGTCTCTTGATTTATCTGATCAGTCTTCTTGATCACGAAGAGAGCTCAGGGCCAATCATCTGCTTTTaGTCATGCAGGGGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: ASLLIYLISLLDHEESSGPIICF*SCRGAA
Trigger: TGCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGG...CCCTGAGCTCTCTTCGTGATCAAGAAGACTGATCAGATAAATCAAGAGACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR GCA 90 bp CTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTACACCTTCAATCATCTaGTTTTGCTCATGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LRARNTVLLAAMEARISFTPSII*FCSCRG
Trigger: GCCCCTGCATGAGCAAAAGCAGATGATTGAAGGTGT...AAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476056.6
CDS-3UTR CCA 90 bp AACAGTCAAATTCACAGAGACAAAGTAGAATGGCAGTTGCCAAGGGCTACTCTCTCCTTCCCGTTCATATaGACCACGGCCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: NSQIHRDKVEWQLPRATLSFPFI*TTAFWA
Trigger: AGCCCAGAAGGCCGTGGTCCATATGAACGGGAAGGA...GAGAGTAGCCCTTGGCAACTGCCATTCTACTTTGTCTCTGTGAATTTGACTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217074.9
CDS-3UTR CCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGTCAGGGTCCGCATGGTaGAGAGGCGCTGCATGTACT +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGSGSAW*RGAACT
Trigger: AGTACATGCAGCGCCTCTCCACCATGCGGACCCTGA...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGCAGGCAGGAAGTAGCTaGAGGGCTGCTGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGQAGSS*RAAERS
Trigger: GCTCCTTTCAGCAGCCCTCCAGCTACTTCCTGCCTG...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp TTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCTGAGTACCAATGTTaGCTACTCTCTGGGTATGAG +
Preference number: 4 (lower is better)
Translates to: LGLRARNTVLLAAMEARISEYQC*LLSGYE
Trigger: CTCATACCCAGAGAGTAGCCAACATTGGTACTCAGA...AATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GCAAGTCTCTTGATTTATCTGATCAGTCTTCTTGATCACGAAGAGAGCTCAGGGCCCCACTGGGTCCTGTaGTCTGAGTACCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: ASLLIYLISLLDHEESSGPHWVL*SEYQCW
Trigger: CCAACATTGGTACTCAGACCACAGGACCCAGTGGGG...CCCTGAGCTCTCTTCGTGATCAAGAAGACTGATCAGATAAATCAAGAGACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR CCA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTACCCCACTGGGTCCTGTaGTCTGAGTACCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLPHWVL*SEYQCW
Trigger: CCAACATTGGTACTCAGACCACAGGACCCAGTGGGG...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GCAAGTCTCTTGATTTATCTGATCAGTCTTCTTGATCACGAAGAGAGCTCAGGGAGCATCCTACCCCACTaGGTCCTGTGGTCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: ASLLIYLISLLDHEESSGSILPH*VLWSEY
Trigger: GTACTCAGACCACAGGACCCAGTGGGGTAGGATGCT...CCCTGAGCTCTCTTCGTGATCAAGAAGACTGATCAGATAAATCAAGAGACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR CCA 90 bp AAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCAGCTGCCTCGTCTATCTTaGCATGGAGGGATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: KHCPFGSHGSEDFLFWFQLPRLS*HGGILE
Trigger: CTCCAGAATCCCTCCATGCCAAGATAGACGAGGCAG...CTGAAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp AAGCTAGCCTGGTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGCTCATCTCACCCCAGCTaGTCTGGAAAAGCTTGTACA +
Preference number: 4 (lower is better)
Translates to: KLAWYLDLARTGVWFCCCSSHPS*SGKACT
Trigger: TGTACAAGCTTTTCCAGACCAGCTGGGGTGAGATGA...GCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATACCAGGCTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR CCA 90 bp CTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGCTACAGATTTCCTAGGAGGCCCACTTCCTCATaGCAGCCTTACTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: LDLARTGVWFCCCYRFPRRPTSS*QPYLMK
Trigger: CTTCATCAAGTAAGGCTGCCATGAGGAAGTGGGCCT...CCTAGGAAATCTGTAGCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674318.1
CDS-3UTR TCA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTACTGGGTCCTGTGGTCTaGGTACCAATGTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLLGPVV*VPMLAT
Trigger: AGTAGCCAACATTGGTACTCAGACCACAGGACCCAG...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217075.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp GCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTAATAGGCTGGATGGGTaGCCAACCTTCATTCACATA +
Preference number: 4 (lower is better)
Translates to: ARNTVLLAAMEARISFSGNRLDG*PTFIHI
Trigger: TATGTGAATGAAGGTTGGTCACCCATCCAGCCTATT...ACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp AACAGTCAAATTCACAGAGACAAAGTAGAATGGCAGTTGCCAAGGGCTACTCTCCTGGGTCCTGTGGTCTaGGTACCAATGTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: NSQIHRDKVEWQLPRATLLGPVV*VPMLDE
Trigger: CTCATCCAACATTGGTACTCAGACCACAGGACCCAG...GAGAGTAGCCCTTGGCAACTGCCATTCTACTTTGTCTCTGTGAATTTGACTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000674244.1
CDS-3UTR GCA 90 bp TGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTTGCCCACACCTGACTTaGGAAGTCCTGGGTCTCGCT +
Preference number: 4 (lower is better)
Translates to: WVTNLHSHTEPKYRYRLICPHLT*EVLGLA
Trigger: AGCGAGACCCAGGACTTCGCAAGTCAGGTGTGGGCA...AATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR GCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGGTTGATGGCCTGCTGTaGGGCCTCATGGGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGVDGLL*GLMGLK
Trigger: TTTGAGACCCATGAGGCCGCACAGCAGGCCATCAAC...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR GCA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTACGGTCCTGCTTCATCTaGTCAAACCTGCGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLRSCFI*SNLRFS
Trigger: ACTGAAGCGCAGGTTTGAGCAGATGAAGCAGGACCG...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp ACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAAAGCCACAGCCATAGTATaGAGCCTGGGCTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TNLHSHTEPKYRYRLIGKATAIV*SLGWRL
Trigger: CAGCCTCCAGCCCAGGCTGCATACTATGGCTGTGGC...TTTCCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217073.7
ENST00000255136.8
CDS-3UTR GCA 90 bp CTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGCTCCCCAATCATCTGCTTTTTGTCTGCACTTTTTaGAGTTTCAAGCCACTCCTT +
Preference number: 4 (lower is better)
Translates to: LGVDIMDKGVETLPNHLLFVCTF*SFKPLL
Trigger: AAGGAGTGGCTTGAAACTGCAAAAAGTGCAGACAAA...AAGCAGATGATTGGGGAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000674318.1
CDS-3UTR CCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGTCCTTCCCGTTCATATaGACCACGGCCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGSFPFI*TTAFWA
Trigger: AGCCCAGAAGGCCGTGGTCCATATGAACGGGAAGGA...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp AACAGTCAAATTCACAGAGACAAAGTAGAATGGCAGTTGCCAAGGGCTACTCTCACTGGTTGGTCAAGATaGCCTTCCGCTCCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: NSQIHRDKVEWQLPRATLTGWSR*PSAPLC
Trigger: GCAAAGAGGAGCGGAAGGCCATCTTGACCAACCAGT...GAGAGTAGCCCTTGGCAACTGCCATTCTACTTTGTCTCTGTGAATTTGACTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000674244.1
CDS-3UTR CCA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAGCTGCATGTACTGGTTaGTCAAGATGGCCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLAACTG*SRWPSA
Trigger: AGCGGAAGGCCATCTTGACCAACCAGTACATGCAGC...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp TCTGAGCAACCGTACTCTGGTGACTCAAGATGGATTACAGGTTTTGGGTACTTAAGGCGCTGCATGTACTaGTTGGTCAAGATGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SEQPYSGDSRWITGFGYLRRCMY*LVKMAF
Trigger: GAAGGCCATCTTGACCAACCAGTACATGCAGCGCCT...TAAGTACCCAAAACCTGTAATCCATCTTGAGTCACCAGAGTACGGTTGCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR CCA 90 bp TGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTTCAGGGTCCGCATGGTaGAGAGGCGCTGCATGTACT +
Preference number: 4 (lower is better)
Translates to: WVTNLHSHTEPKYRYRLISGSAW*RGAACT
Trigger: AGTACATGCAGCGCCTCTCCACCATGCGGACCCTGA...AATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp CTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGAGTACCAATGTTaGCTACTCTCTGGGTATGAG +
Preference number: 4 (lower is better)
Translates to: LRARNTVLLAAMEARISFSEYQC*LLSGYE
Trigger: CTCATACCCAGAGAGTAGCCAACATTGGTACTCAGA...AAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGCCCCACTGGGTCCTGTaGTCTGAGTACCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGPHWVL*SEYQCW
Trigger: CCAACATTGGTACTCAGACCACAGGACCCAGTGGGG...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAGCATCCTACCCCACTaGGTCCTGTGGTCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGSILPH*VLWSEY
Trigger: GTACTCAGACCACAGGACCCAGTGGGGTAGGATGCT...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTAATCTTGCCAGCCAGCTaGGTGTGGACATCATGGATA +
Preference number: 4 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVILPAS*VWTSWI
Trigger: TATCCATGATGTCCACACCCAGCTGGCTGGCAAGAT...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000372822.2
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGCTACAGATTTCCATCTTGCCAGCCAGCTaGGTGTGGACATCATGGATA +
Preference number: 4 (lower is better)
Translates to: VSRFSKDRSLVLLLLQISILPAS*VWTSWI
Trigger: TATCCATGATGTCCACACCCAGCTGGCTGGCAAGAT...GGAAATCTGTAGCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR CCA 90 bp GAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCGAGGATTTCCTTTTCTaGTTTCAGTGCATGTACGCC +
Preference number: 4 (lower is better)
Translates to: ESQKHCPFGSHGSEDFLFEDFLF*FQCMYA
Trigger: GGCGTACATGCACTGAAACCAGAAAAGGAAATCCTC...GAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp GCAAGTCTCTTGATTTATCTGATCAGTCTTCTTGATCACGAAGAGAGCTCAGGGGCAACCGTACTCTGGTaGCTCAAGATGGATTACAGG +
Preference number: 4 (lower is better)
Translates to: ASLLIYLISLLDHEESSGATVLW*LKMDYR
Trigger: CCTGTAATCCATCTTGAGTCACCAGAGTACGGTTGC...CCCTGAGCTCTCTTCGTGATCAAGAAGACTGATCAGATAAATCAAGAGACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR GCA 90 bp GAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGTTCTGGGCTTCCTCATaGTTCTCAAAGTTGACAAAG +
Preference number: 4 (lower is better)
Translates to: EPETLSFWQPWKRGFPFLFWASS*FSKLTK
Trigger: CTTTGTCAACTTTGAGAAGCATGAGGAAGCCCAGAA...CAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR GCA 90 bp GAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTTCTGGGCTTCCTCATaGTTCTCAAAGTTGACAAAG +
Preference number: 4 (lower is better)
Translates to: ESQKHCPFGSHGSEDFLFFWASS*FSKLTK
Trigger: CTTTGTCAACTTTGAGAAGCATGAGGAAGCCCAGAA...GAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR GCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGCGGTCCTGCTTCATCTaGTCAAACCTGCGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGRSCFI*SNLRFS
Trigger: ACTGAAGCGCAGGTTTGAGCAGATGAAGCAGGACCG...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp ACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAAACTGCAGCACGGCCACTaGCTCGTCTATCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: TNLHSHTEPKYRYRLIGKLQHGH*LVYLGM
Trigger: CATGCCAAGATAGACGAGGCAGTGGCCGTGCTGCAG...TTTCCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGCAGGTGCCAATCATCTaGTTTTGCTCATGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGQVPII*FCSCRG
Trigger: GCCCCTGCATGAGCAAAAGCAGATGATTGGCACCTG...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372822.2
CDS-3UTR CCA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTATCATGGGTCTCAAAATaGACAAAGCCGAAACCCCGG +
Preference number: 4 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLSWVSK*TKPKPR
Trigger: CCGGGGTTTCGGCTTTGTCCATTTTGAGACCCATGA...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGACTGGTTGGTCAAGATaGCCTTCCGCTCCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGTGWSR*PSAPLC
Trigger: GCAAAGAGGAGCGGAAGGCCATCTTGACCAACCAGT...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp TGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTCCCCACTGGGTCCTGTaGTCTGAGTACCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: WVTNLHSHTEPKYRYRLIPHWVL*SEYQCW
Trigger: CCAACATTGGTACTCAGACCACAGGACCCAGTGGGG...AATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp TGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTAGCATCCTACCCCACTaGGTCCTGTGGTCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: WVTNLHSHTEPKYRYRLISILPH*VLWSEY
Trigger: GTACTCAGACCACAGGACCCAGTGGGGTAGGATGCT...AATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp AACAGTCAAATTCACAGAGACAAAGTAGAATGGCAGTTGCCAAGGGCTACTCTCATCTTGCCAGCCAGCTaGGTGTGGACATCATGGATA +
Preference number: 4 (lower is better)
Translates to: NSQIHRDKVEWQLPRATLILPAS*VWTSWI
Trigger: TATCCATGATGTCCACACCCAGCTGGCTGGCAAGAT...GAGAGTAGCCCTTGGCAACTGCCATTCTACTTTGTCTCTGTGAATTTGACTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000674244.1
CDS-3UTR CCA 90 bp CTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGCTCCCCAATCATCTGCTTGCTTGTACATTTGTATaGGTTAATTCTGGGTCCATA +
Preference number: 4 (lower is better)
Translates to: LGVDIMDKGVETLPNHLLACTFV*VNSGSI
Trigger: TATGGACCCAGAATTAACCCATACAAATGTACAAGC...AAGCAGATGATTGGGGAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674318.1
CDS-3UTR CCA 90 bp AAAGCTAGCCTGGTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGTCACCCCAGCTGGTCTaGAAAAGCTTGTACATTTGT +
Preference number: 4 (lower is better)
Translates to: KASLVSRFSKDRSLVLLLSPQLV*KSLYIC
Trigger: ACAAATGTACAAGCTTTTCCAGACCAGCTGGGGTGA...CAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATACCAGGCTAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR TCA 90 bp GAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCAAATAGGCTGGATGGGTaGCCAACCTTCATTCACATA +
Preference number: 4 (lower is better)
Translates to: ETLSFWQPWKRGFPFLVSNRLDG*PTFIHI
Trigger: TATGTGAATGAAGGTTGGTCACCCATCCAGCCTATT...TGAAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp AGAAAAGCTAGCCTGGTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGAACAGGCTAACACAATaGACCCTTCCAGCAAGTCTA +
Preference number: 4 (lower is better)
Translates to: RKASLVSRFSKDRSLVLLNRLTQ*TLPASL
Trigger: TAGACTTGCTGGAAGGGTTCATTGTGTTAGCCTGTT...CAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATACCAGGCTAGCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR TCA 90 bp AATGAACCCTTCCAGCAAGTCTATGAAGTGATATCCTCATGTGGTAGGTGGGCAAACAGGCTAACACAATaGACCCTTCCAGCAAGTCTA +
Preference number: 4 (lower is better)
Translates to: NEPFQQVYEVISSCGRWANRLTQ*TLPASL
Trigger: TAGACTTGCTGGAAGGGTTCATTGTGTTAGCCTGTT...TGCCCACCTACCACATGAGGATATCACTTCATAGACTTGCTGGAAGGGTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
CDS-3UTR TCA 90 bp GCAAGTCTCTTGATTTATCTGATCAGTCTTCTTGATCACGAAGAGAGCTCAGGGTCTGATCAGTCTTCTTaGTCACGAAGAGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: ASLLIYLISLLDHEESSGSDQSS*SRRELR
Trigger: CCTGAGCTCTCTTCGTGATCAAGAAGACTGATCAGA...CCCTGAGCTCTCTTCGTGATCAAGAAGACTGATCAGATAAATCAAGAGACTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR GCA 90 bp ACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAAACGCTTCAGTTCATTCTaGCGCTCCACGCGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: TNLHSHTEPKYRYRLIGKRFSSF*RSTRFW
Trigger: CCAAAAGCGCGTGGAGCGGCAGAATGAACTGAAGCG...TTTCCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR GCA 90 bp ACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAAACCTGGACCCGATAGGTaGTATGTGCTGCTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: TNLHSHTEPKYRYRLIGKPGPDR*YVLLRN
Trigger: GTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGG...TTTCCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000372822.2
ENST00000537323.5
CDS-3UTR GCA 90 bp ACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAAACCAATCATCTGCTTTTaGTCATGCAGGGGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: TNLHSHTEPKYRYRLIGKPIICF*SCRGAA
Trigger: TGCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGG...TTTCCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000372822.2
ENST00000537323.5
CDS-3UTR CCA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTAATGATGCGAATAGGCTaGCCTTTGAGCATCTCAAAG +
Preference number: 4 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVMMRIG*PLSISK
Trigger: CTTTGAGATGCTCAAAGGCCAGCCTATTCGCATCAT...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp GAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGGATGTTCCCAAAGGTaGAGAAGGTATCATATAAAG +
Preference number: 4 (lower is better)
Translates to: EPETLSFWQPWKRGFPFLGCSQR*RRYHIK
Trigger: CTTTATATGATACCTTCTCCACCTTTGGGAACATCC...CAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTACTTTGTCGCCTCTTCTaGGGAGGAAAAACACACAAA +
Preference number: 4 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVLCRLF*GGKTHK
Trigger: TTTGTGTGTTTTTCCTCCCCAGAAGAGGCGACAAAG...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000476056.6
CDS-3UTR CCA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATCTGAGTACCAATGTTaGCTACTCTCTGGGTATGAG +
Preference number: 4 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVSEYQC*LLSGYE
Trigger: CTCATACCCAGAGAGTAGCCAACATTGGTACTCAGA...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217075.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGATCTTGCCAGCCAGCTaGGTGTGGACATCATGGATA +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGILPAS*VWTSWI
Trigger: TATCCATGATGTCCACACCCAGCTGGCTGGCAAGAT...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000372822.2
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCAGAGGATTTCCTTTTCTaGTTTCAGTGCATGTACGCC +
Preference number: 4 (lower is better)
Translates to: ETLSFWQPWKRGFPFLVSEDFLF*FQCMYA
Trigger: GGCGTACATGCACTGAAACCAGAAAAGGAAATCCTC...TGAAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTATTCCTTTTCTTGGCATaGAGGGATTCTGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLFLFLA*RDSGDS
Trigger: GGAGTCTCCAGAATCCCTCCATGCCAAGAAAAGGAA...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217075.7
ENST00000372822.2
CDS-3UTR CCA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTAAGGATTTCCTTTTCTTaGCATGGAGGGATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVRISFS*HGGILE
Trigger: CTCCAGAATCCCTCCATGCCAAGAAAAGGAAATCCT...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217075.7
ENST00000372822.2
3UTR CAA 72 bp CTTGATGAAGTTGCTGAAGAAGCTGAGGTATTGATGTaGCTGCCATTTTCATTCATCTCACCCCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LDEVAEEAEVLM*LPFSFISPQLV
Trigger: GACCAGCTGGGGTGAGATGAATGAAAATGGCAGCAACATCAATACCTCAGCTTCTTCAGCAACTTCATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674318.1
CDS-3UTR TCA 90 bp ACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAAAGCTCCCGTCGAGACTTaGAGTGACCCACAAAGACTT +
Preference number: 4 (lower is better)
Translates to: TNLHSHTEPKYRYRLIGKAPVET*SDPQRL
Trigger: AAGTCTTTGTGGGTCACTTCAAGTCTCGACGGGAGC...TTTCCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR TCA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAAATAGGCTGGATGGGTaGCCAACCTTCATTCACATA +
Preference number: 4 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLNRLDG*PTFIHI
Trigger: TATGTGAATGAAGGTTGGTCACCCATCCAGCCTATT...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000372822.2
ENST00000476056.6
ENST00000537323.5
CDS-3UTR TCA 90 bp GTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGCTACAGATTTCCAGCAAGTCTATGAAGTaGTATCCTCATGTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: VSRFSKDRSLVLLLLQISSKSMK*YPHVVG
Trigger: ACCTACCACATGAGGATATCACTTCATAGACTTGCT...GGAAATCTGTAGCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR TCA 90 bp GCAAGTCTCTTGATTTATCTGATCAGTCTTCTTGATCACGAAGAGAGCTCAGGGCTTCCAGCAAGTCTATaGAGTGATATCCTCATGTGG +
Preference number: 4 (lower is better)
Translates to: ASLLIYLISLLDHEESSGLPASL*SDILMW
Trigger: CCACATGAGGATATCACTTCATAGACTTGCTGGAAG...CCCTGAGCTCTCTTCGTGATCAAGAAGACTGATCAGATAAATCAAGAGACTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR CCA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTAGTTTGTCGTCATCAATaGAGTCGTCCAGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVVCRHQ*SRPDSS
Trigger: TGAAGAATCTGGACGACTCCATTGATGACGACAAAC...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp ACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAAAAGGCGCTGCATGTACTaGTTGGTCAAGATGGCCTTC +
Preference number: 4 (lower is better)
Translates to: TNLHSHTEPKYRYRLIGKRRCMY*LVKMAF
Trigger: GAAGGCCATCTTGACCAACCAGTACATGCAGCGCCT...TTTCCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp AGAAAAGCTAGCCTGGTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGTCTGGTGACTCAAGATaGATTACAGGTTTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: RKASLVSRFSKDRSLVLLSGDSR*ITGFGY
Trigger: GTACCCAAAACCTGTAATCCATCTTGAGTCACCAGA...CAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATACCAGGCTAGCTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR TCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAATAGGCTGGATGGGTaGCCAACCTTCATTCACATA +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGNRLDG*PTFIHI
Trigger: TATGTGAATGAAGGTTGGTCACCCATCCAGCCTATT...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000372822.2
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAGTTTGTCGTCATCAATaGAGTCGTCCAGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLVCRHQ*SRPDSS
Trigger: TGAAGAATCTGGACGACTCCATTGATGACGACAAAC...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAGGATTTCCTTTTCTTaGCATGGAGGGATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGRISFS*HGGILE
Trigger: CTCCAGAATCCCTCCATGCCAAGAAAAGGAAATCCT...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217075.7
ENST00000372822.2
CDS-3UTR CCA 90 bp GTATCTAGATTTAGCAAGGACCGGAGTTTGGTTCTGCTGCTGCTACAGATTTCCATGGATTACAGGTTTTaGGTACTTAGCTCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: VSRFSKDRSLVLLLLQISMDYRF*VLSSLR
Trigger: CCTTAAGGAGCTAAGTACCCAAAACCTGTAATCCAT...GGAAATCTGTAGCAGCAGCAGAACCAAACTCCGGTCCTTGCTAAATCTAGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR GCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGTTCTGGGCTTCCTCATaGTTCTCAAAGTTGACAAAG +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGFWASS*FSKLTK
Trigger: CTTTGTCAACTTTGAGAAGCATGAGGAAGCCCAGAA...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CCA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGGTTTGTCGTCATCAATaGAGTCGTCCAGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGVCRHQ*SRPDSS
Trigger: TGAAGAATCTGGACGACTCCATTGATGACGACAAAC...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CCA 90 bp GCAAGTCTCTTGATTTATCTGATCAGTCTTCTTGATCACGAAGAGAGCTCAGGGGCTTGTACATTTGTATaGGTTAATTCTGGGTCCATA +
Preference number: 4 (lower is better)
Translates to: ASLLIYLISLLDHEESSGACTFV*VNSGSI
Trigger: TATGGACCCAGAATTAACCCATACAAATGTACAAGC...CCCTGAGCTCTCTTCGTGATCAAGAAGACTGATCAGATAAATCAAGAGACTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR CAA 90 bp TGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGGAGGTCCTGCAGGCCTaGCTCGTCCACATCCACCGG +
Preference number: 5 (lower is better)
Translates to: CTAGAAGLVYSILPHWVLEVLQA*LVHIHR
Trigger: CCGGTGGATGTGGACGAGCAAGGCCTGCAGGACCTC...CAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CAA 90 bp GGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCGCTGCTGAGGAACATTaGCACGGCAGGAGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: GRSGRPGVQHPTPLGPVVAAEEH*HGRSGR
Trigger: CCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGC...GACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS CCA 90 bp CGTAGCCCAGCGAGCGCCGGGTGGCTACATCGCGGCACACGCGGATaGACAGGATGGGGCCGGCGGGAGAGAACTTCTCATAGAGCATGG +
Preference number: 5 (lower is better)
Translates to: RSPASAGWLHRGTRG*TGWGRRERTSHRAW
Trigger: CCATGCTCTATGAGAAGTTCTCTCCCGCCGGCCCCATCCTGTCCATCCGCGTGTGCCGCGATGTAGCCACCCGGCGCTCGCTGGGCTACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS CCA 90 bp ATGCAGCCTGGGCTGGAGGCTGGGGCATGGCAGGCAGGAAGTAGCTaGAGGGCTGCTGAAAGGAGCCCAGGAGGGGGTTGCTCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: MQPGLEAGAWQAGSS*RAAERSPGGGCSGS
Trigger: GGACCCTGAGCAACCCCCTCCTGGGCTCCTTTCAGCAGCCCTCCAGCTACTTCCTGCCTGCCATGCCCCAGCCTCCAGCCCAGGCTGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217073.7
ENST00000255136.8
CDS CCA 90 bp AGGTGGCTGGGATGTCCACCTGGGGGCAGGCTGGGTGGGTGTCACTaGGCCACAGCCATAGTATGCAGCCTGGGCTGGAGGCTGGGGCAT +
Preference number: 5 (lower is better)
Translates to: RWLGCPPGGRLGGCH*ATAIVCSLGWRLGH
Trigger: ATGCCCCAGCCTCCAGCCCAGGCTGCATACTATGGCTGTGGCCCAGTGACACCCACCCAGCCTGCCCCCAGGTGGACATCCCAGCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217073.7
ENST00000255136.8
CDS CCA 90 bp AGGTGGCTGGGATGTCCACCTGGGGGCAGGCTGGGTGGGTGTCACTaGGCCACAGCCATAGTATGCAGCCTGGGCTGGAGGCTGCATGGG +
Preference number: 5 (lower is better)
Translates to: RWLGCPPGGRLGGCH*ATAIVCSLGWRLHG
Trigger: CCCATGCAGCCTCCAGCCCAGGCTGCATACTATGGCTGTGGCCCAGTGACACCCACCCAGCCTGCCCCCAGGTGGACATCCCAGCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372819.5
ENST00000372824.5
CDS-3UTR CAA 90 bp CCAGGAGGGGGTTGCTCAGGGTCCGCATGGTGGAGAGGCGCTGCATGTACTGGTGAGCCCAGGAGGGGGTaGCTCAGGGTCCGCATGGTG +
Preference number: 5 (lower is better)
Translates to: PGGGCSGSAWWRGAACTGEPRRG*LRVRMV
Trigger: CACCATGCGGACCCTGAGCAACCCCCTCCTGGGCTC...ACCAGTACATGCAGCGCCTCTCCACCATGCGGACCCTGAGCAACCCCCTCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CAA 90 bp TTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTCTGGTGGCCGGACCATaGAGGCACCTGGAGGGTAGG +
Preference number: 5 (lower is better)
Translates to: LHGRSGRPGVQHPTPLGPLVAGP*RHLEGR
Trigger: CCTACCCTCCAGGTGCCTCAATGGTCCGGCCACCAG...AGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000674244.1
CDS-3UTR CAA 90 bp GGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGAGCTGGTGGCCGGACCATaGAGGCACCTGGAGGGTAGG +
Preference number: 5 (lower is better)
Translates to: GAAGLVYSILPHWVLWSELVAGP*RHLEGR
Trigger: CCTACCCTCCAGGTGCCTCAATGGTCCGGCCACCAG...CTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000674244.1
CDS-3UTR CAA 90 bp CAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGGCTGCTGAGGAACATTaGCACGGCAGGAGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: QERPAWCTASYPTGSCGLAAEEH*HGRSGR
Trigger: CCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGC...CAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CAA 90 bp CTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCGAGCCCAGGAGGGGGTaGCTCAGGGTCCGCATGGTG +
Preference number: 5 (lower is better)
Translates to: LLSWDVHSRLLDPIGAMCEPRRG*LRVRMV
Trigger: CACCATGCGGACCCTGAGCAACCCCCTCCTGGGCTC...GCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR CAA 90 bp GTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCTGCAGCACGGCCACGCTGCTGAGGAACATTaGCACGGCAGGAGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: VHVRLRLLHSLVCLQHGHAAEEH*HGRSGR
Trigger: CCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGC...GTGGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCAC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674318.1
CDS CCA 90 bp TGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTaGGTCCTGTGGTCTGAGTACCAATGTTGGCTGGGGCATGGCAGG +
Preference number: 5 (lower is better)
Translates to: CTAGAAGLVYSILPH*VLWSEYQCWLGHGR
Trigger: CCTGCCATGCCCCAGCCAACATTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR CAA 90 bp GCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGACCGCTCCACGCGCTTTaGGGCCCGGCCCGCGTACAG +
Preference number: 5 (lower is better)
Translates to: APGPDRCYVLLRNICTAGPLHAL*GPARVQ
Trigger: CTGTACGCGGGCCGGGCCCAAAAGCGCGTGGAGCGG...TCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
CDS-3UTR CAA 90 bp GCTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGGCTGCTGAGGAACATTaGCACGGCAGGAGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: APVLGCAQPAPGPDRCYVAAEEH*HGRSGR
Trigger: CCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGC...CACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS GCA 90 bp CTTTGCGCTGGGCCAGTGCCACGTAGAGTGGCTTGGTGCCCACGATaGGCCCGTTCATCTCTGTCACGGCCTTTGTCGCCTCTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: LCAGPVPRRVAWCPR*ARSSLSRPLSPLLG
Trigger: CCCCAGAAGAGGCGACAAAGGCCGTGACAGAGATGAACGGGCGCATCGTGGGCACCAAGCCACTCTACGTGGCACTGGCCCAGCGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000476056.6
ENST00000490798.6
CDS-3UTR CAA 90 bp GCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGAGTACCAAGAGGTCCTGCAGGCCTaGCTCGTCCACATCCACCGG +
Preference number: 5 (lower is better)
Translates to: AGLVYSILPHWVLWSEYQEVLQA*LVHIHR
Trigger: CCGGTGGATGTGGACGAGCAAGGCCTGCAGGACCTC...TTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CAA 90 bp GCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGCTCCCCAATGAGCCCAGGAGGGGGTaGCTCAGGGTCCGCATGGTG +
Preference number: 5 (lower is better)
Translates to: ASQLGVDIMDKGVETLPNEPRRG*LRVRMV
Trigger: CACCATGCGGACCCTGAGCAACCCCCTCCTGGGCTC...ATTGGGGAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000537323.5
ENST00000674244.1
CDS-3UTR CAA 90 bp GGGCTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGCCCAATCATCTGCTTTaGCTCATGCAGGGGCGCCGC +
Preference number: 5 (lower is better)
Translates to: GLLSWDVHSRLLDPIGAMPNHLL*LMQGRR
Trigger: GCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGGG...CATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CAA 90 bp CTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCAGCATGCCCGTGATCTaGCCAGCCAGCTGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: LLSWDVHSRLLDPIGAMCSMPVI*PASWVW
Trigger: CCACACCCAGCTGGCTGGCAAGATCACGGGCATGCT...GCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CAA 90 bp GCTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGGTCCGGATCGCAGGGTaGATGCCCTTTCCACCGCAC +
Preference number: 5 (lower is better)
Translates to: APVLGCAQPAPGPDRCYVVRIAG*MPFPPH
Trigger: GTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGAC...CACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490798.6
ENST00000674318.1
CDS CCA 90 bp CTGGGTGGGTGTCACTGGGCCACAGCCATAGTATGCAGCCTGGGCTaGAGGCTGCATGGGAAAAGAAGACCCAGACTGAGGGGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: LGGCHWATAIVCSLG*RLHGKRRPRLRGLA
Trigger: CGCCAAGCCCCTCAGTCTGGGTCTTCTTTTCCCATGCAGCCTCCAGCCCAGGCTGCATACTATGGCTGTGGCCCAGTGACACCCACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372819.5
ENST00000372824.5
CDS CCA 90 bp GGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTaGTCTGAGTACCAATGTTGGCTGGGGCATGGCAGGCAGGAAGTA +
Preference number: 5 (lower is better)
Translates to: GAAGLVYSILPHWVL*SEYQCWLGHGRQEV
Trigger: TACTTCCTGCCTGCCATGCCCCAGCCAACATTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR CAA 90 bp GATCAGAGGGATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGAGCCCAGGAGGGGGTaGCTCAGGGTCCGCATGGTG +
Preference number: 5 (lower is better)
Translates to: DQRDGVTCPDRRVDALSTEPRRG*LRVRMV
Trigger: CACCATGCGGACCCTGAGCAACCCCCTCCTGGGCTC...GGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCTCTGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR CAA 90 bp GATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGGCTGCTGAGGAACATTaGCACGGCAGGAGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: DGVTCPDRRVDALSTAPLAAEEH*HGRSGR
Trigger: CCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGC...CAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
CDS-3UTR CAA 90 bp GGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCACTGCCTCGTCTATCTaGGCATGGAGGGATTCTGGA +
Preference number: 5 (lower is better)
Translates to: GRSGRPGVQHPTPLGPVVTASSI*AWRDSG
Trigger: TCCAGAATCCCTCCATGCCAAGATAGACGAGGCAGT...GACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674318.1
CDS-3UTR CAA 90 bp TTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTCCGCTCCACGCGCTTTaGGGCCCGGCCCGCGTACAG +
Preference number: 5 (lower is better)
Translates to: LGLRARNTVLLAAMEARIPLHAL*GPARVQ
Trigger: CTGTACGCGGGCCGGGCCCAAAAGCGCGTGGAGCGG...AATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp TTCCTTTTCTGGTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTCCGCTCCACGCGCTTTaGGGCCCGGCCCGCGTACAG +
Preference number: 5 (lower is better)
Translates to: FLFWFQCMYAFGCSIAWCPLHAL*GPARVQ
Trigger: CTGTACGCGGGCCGGGCCCAAAAGCGCGTGGAGCGG...ACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGAAAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp GGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTCGCTGCATGTACTGGTaGGTCAAGATGGCCTTCCGC +
Preference number: 5 (lower is better)
Translates to: GTFARQERPAWCTASYPTRCMYW*VKMAFR
Trigger: GCGGAAGGCCATCTTGACCAACCAGTACATGCAGCG...AGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR CAA 90 bp GATCAGAGGGATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCTGCTGAGGAACATTaGCACGGCAGGAGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: DQRDGVTCPDRRVDALSTAAEEH*HGRSGR
Trigger: CCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGC...GGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCTCTGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
CDS-3UTR CAA 90 bp GCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGAGTACCAACCCAATCATCTGCTTTaGCTCATGCAGGGGCGCCGC +
Preference number: 5 (lower is better)
Translates to: AGLVYSILPHWVLWSEYQPNHLL*LMQGRR
Trigger: GCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGGG...TTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CAA 90 bp AGGGATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCAAGCATGCCCGTGATCTaGCCAGCCAGCTGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: RDGVTCPDRRVDALSTAPSMPVI*PASWVW
Trigger: CCACACCCAGCTGGCTGGCAAGATCACGGGCATGCT...TGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR CAA 90 bp CTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTAATCCCATTCATGGTGTaGATGGCCTGCTGTGCGGCC +
Preference number: 5 (lower is better)
Translates to: LLRNICTAGAAGLVYSILIPFMV*MACCAA
Trigger: GGCCGCACAGCAGGCCATCAACACCATGAATGGGAT...TAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537323.5
CDS-3UTR CAA 90 bp CCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGCGCGAGTGGCCGCTGTaGTCCCTCATCACCTTCACA +
Preference number: 5 (lower is better)
Translates to: PGPDRCYVLLRNICTAGAREWPL*SLITFT
Trigger: TGTGAAGGTGATGAGGGACAACAGCGGCCACTCGCG...CGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CAA 90 bp GGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGCTGCGCTGCATGTACTGGTaGGTCAAGATGGCCTTCCGC +
Preference number: 5 (lower is better)
Translates to: GVTCPDRRVDALSTAPLLRCMYW*VKMAFR
Trigger: GCGGAAGGCCATCTTGACCAACCAGTACATGCAGCG...CAGCAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR CAA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATGAGCCCAGGAGGGGGTaGCTCAGGGTCCGCATGGTG +
Preference number: 5 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDEPRRG*LRVRMV
Trigger: CACCATGCGGACCCTGAGCAACCCCCTCCTGGGCTC...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp TGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGCTGTTTCTGAGCCCCAATCATCTGCTTTaGCTCATGCAGGGGCGCCGC +
Preference number: 5 (lower is better)
Translates to: CPDRRVDALSTAPLLFLSPNHLL*LMQGRR
Trigger: GCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGGG...GCTCAGAAACAGCAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372826.6
ENST00000674318.1
CDS-3UTR CAA 90 bp CAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCAGCATGCCCGTGATCTaGCCAGCCAGCTGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: QGLRAESQKHCPFGSHGSSMPVI*PASWVW
Trigger: CCACACCCAGCTGGCTGGCAAGATCACGGGCATGCT...GCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp GGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGAGCATGCCCGTGATCTaGCCAGCCAGCTGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: GLRAESQKHCPFGSHGSESMPVI*PASWVW
Trigger: CCACACCCAGCTGGCTGGCAAGATCACGGGCATGCT...CTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp GATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGCTCAGCATGCCCGTGATCTaGCCAGCCAGCTGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: DLASQLGVDIMDKGVETLSMPVI*PASWVW
Trigger: CCACACCCAGCTGGCTGGCAAGATCACGGGCATGCT...GAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS CCA 90 bp TTCATGGTGTTGATGGCCTGCTGTGCGGCCTCATGGGTCTCAAAATaGACAAAGCCGAAACCCCGGGAGCCATGCTCGTCACACGCCACC +
Preference number: 5 (lower is better)
Translates to: FMVLMACCAASWVSK*TKPKPREPCSSHAT
Trigger: GGTGGCGTGTGACGAGCATGGCTCCCGGGGTTTCGGCTTTGTCCATTTTGAGACCCATGAGGCCGCACAGCAGGCCATCAACACCATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp GGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGCGCGAGTGGCCGCTGTaGTCCCTCATCACCTTCACA +
Preference number: 5 (lower is better)
Translates to: GLRAESQKHCPFGSHGSEREWPL*SLITFT
Trigger: TGTGAAGGTGATGAGGGACAACAGCGGCCACTCGCG...CTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp CCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGACAAAGCCAAACCCCTaGCTGTGGCCACCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: PGPDRCYVLLRNICTAGATKPNP*LWPPSV
Trigger: GACAGAGGGTGGCCACAGCAAGGGGTTTGGCTTTGT...CGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR CAA 90 bp GCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCCGCTGCATGTACTGGTaGGTCAAGATGGCCTTCCGC +
Preference number: 5 (lower is better)
Translates to: AQPAPGPDRCYVLLRNICRCMYW*VKMAFR
Trigger: GCGGAAGGCCATCTTGACCAACCAGTACATGCAGCG...GCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000490798.6
ENST00000537323.5
ENST00000674244.1
CDS-3UTR CAA 90 bp GCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTGAGCCCAGGAGGGGGTaGCTCAGGGTCCGCATGGTG +
Preference number: 5 (lower is better)
Translates to: AESQKHCPFGSHGSEDFLEPRRG*LRVRMV
Trigger: CACCATGCGGACCCTGAGCAACCCCCTCCTGGGCTC...AAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp GATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGCTCCCCAATCATCTGCTTTaGCTCATGCAGGGGCGCCGC +
Preference number: 5 (lower is better)
Translates to: DLASQLGVDIMDKGVETLPNHLL*LMQGRR
Trigger: GCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGGG...GAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000537323.5
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CAA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCAGCATGCCCGTGATCTaGCCAGCCAGCTGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: RVCRALGLRARNTVLLAASMPVI*PASWVW
Trigger: CCACACCCAGCTGGCTGGCAAGATCACGGGCATGCT...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp GAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGACTGCCTCGTCTATCTaGGCATGGAGGGATTCTGGA +
Preference number: 5 (lower is better)
Translates to: EHLHGRSGRPGVQHPTPLTASSI*AWRDSG
Trigger: TCCAGAATCCCTCCATGCCAAGATAGACGAGGCAGT...CAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
ENST00000674318.1
CDS GCA 90 bp CACCTTGGGAAGTGGCAGAGCCAGGTTTCATCCCTGTGTTATGACTaGCTCACGGGGCCCACACCAATAGGCCAGTCTGAGAGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: HLGKWQSQVSSLCYD*LTGPTPIGQSESGR
Trigger: CCTTCCACTCTCAGACTGGCCTATTGGTGTGGGCCCCGTGAGGCAGTCATAACACAGGGATGAAACCTGGCTCTGCCACTTCCCAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372819.5
ENST00000372824.5
CDS-3UTR CAA 90 bp GCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTGAGTCCTCCAGGTTCTaGATGAAGATGTTGCCCACA +
Preference number: 5 (lower is better)
Translates to: AAEEHLHGRSGRPGVQHPESSRF*MKMLPT
Trigger: TGTGGGCAACATCTTCATCAAGAACCTGGAGGACTC...AGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CAA 90 bp GAGCCCAGGAGGGGGTTGCTCAGGGTCCGCATGGTGGAGAGGCGCTGCATGTACTCATATAAAGCCTTGTaGTCAATGGAGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: EPRRGLLRVRMVERRCMYSYKAL*SMESSR
Trigger: CCTGGAGGACTCCATTGACAACAAGGCTTTATATGA...GTACATGCAGCGCCTCTCCACCATGCGGACCCTGAGCAACCCCCTCCTGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CAA 90 bp GCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTGAGGTCCTGCAGGCCTaGCTCGTCCACATCCACCGG +
Preference number: 5 (lower is better)
Translates to: AESQKHCPFGSHGSEDFLEVLQA*LVHIHR
Trigger: CCGGTGGATGTGGACGAGCAAGGCCTGCAGGACCTC...AAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTACCGCTCCACGCGCTTTaGGGCCCGGCCCGCGTACAG +
Preference number: 5 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVPLHAL*GPARVQ
Trigger: CTGTACGCGGGCCGGGCCCAAAAGCGCGTGGAGCGG...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp GAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCACCGCTCCACGCGCTTTaGGGCCCGGCCCGCGTACAG +
Preference number: 5 (lower is better)
Translates to: ETLSFWQPWKRGFPFLVSPLHAL*GPARVQ
Trigger: CTGTACGCGGGCCGGGCCCAAAAGCGCGTGGAGCGG...TGAAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp AAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCAGCCGCTCCACGCGCTTTaGGGCCCGGCCCGCGTACAG +
Preference number: 5 (lower is better)
Translates to: KHCPFGSHGSEDFLFWFQPLHAL*GPARVQ
Trigger: CTGTACGCGGGCCGGGCCCAAAAGCGCGTGGAGCGG...CTGAAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp CTGGGCCTGGTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCACTGCCTCGTCTATCTaGGCATGGAGGGATTCTGGA +
Preference number: 5 (lower is better)
Translates to: LGLVSVHVRLRLLHSLVCTASSI*AWRDSG
Trigger: TCCAGAATCCCTCCATGCCAAGATAGACGAGGCAGT...GCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674318.1
CDS-3UTR CAA 90 bp CTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCAAAGTAGAATGGCAGTaGCCAAGGGCTACTCTCTGG +
Preference number: 5 (lower is better)
Translates to: LLSWDVHSRLLDPIGAMCKVEWQ*PRATLW
Trigger: CCAGAGAGTAGCCCTTGGCAACTGCCATTCTACTTT...GCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000674244.1
ENST00000674318.1
CDS-3UTR CAA 90 bp GTCTTTGTACTTTCCGTCTCTGGGCCTGGTTTCAGTGCATGTACGCCTTCGGCTGTCCGGATCGCAGGGTaGATGCCCTTTCCACCGCAC +
Preference number: 5 (lower is better)
Translates to: VFVLSVSGPGFSACTPSAVRIAG*MPFPPH
Trigger: GTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGAC...AGCCGAAGGCGTACATGCACTGAAACCAGGCCCAGAGACGGAAAGTACAAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674318.1
CDS-3UTR CAA 90 bp GATCAGAGGGATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCTTCCGTCTCTGGGCCTaGGCATGGAGGGATTCTGGA +
Preference number: 5 (lower is better)
Translates to: DQRDGVTCPDRRVDALSTFRLWA*AWRDSG
Trigger: TCCAGAATCCCTCCATGCCAAGGCCCAGAGACGGAA...GGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATCCCTCTGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372826.6
CDS-3UTR CAA 90 bp AGGGTTGATGCCCTTTCCACCGCACCACTGCTGTTTCTGAGCAACCGTACTCTGGCCAATCATCTGCTTTaGCTCATGCAGGGGCGCCGC +
Preference number: 5 (lower is better)
Translates to: RVDALSTAPLLFLSNRTLANHLL*LMQGRR
Trigger: GCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGGC...CAGAGTACGGTTGCTCAGAAACAGCAGTGGTGCGGTGGAAAGGGCATCAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS TCA 90 bp CAGGGACACCATGGCAGGAACTCCACTGGCTCCTGCAGGGACTGGTaGGTCAAGACCCACAAGGCTGTAATGAAAGCTCCTTCCTCCCAT +
Preference number: 5 (lower is better)
Translates to: QGHHGRNSTGSCRDW*VKTHKAVMKAPSSH
Trigger: ATGGGAGGAAGGAGCTTTCATTACAGCCTTGTGGGTCTTGACTCACCAGTCCCTGCAGGAGCCAGTGGAGTTCCTGCCATGGTGTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372819.5
ENST00000372824.5
CDS GCA 90 bp GCGGTCATTCAGCAGCATCCCATTCATGGTGTTGATGGCCTGCTGTaGGGCCTCATGGGTCTCAAAATGGACAAAGCCGAAACCCCGGGA +
Preference number: 5 (lower is better)
Translates to: AVIQQHPIHGVDGLL*GLMGLKMDKAETPG
Trigger: TCCCGGGGTTTCGGCTTTGTCCATTTTGAGACCCATGAGGCCGCACAGCAGGCCATCAACACCATGAATGGGATGCTGCTGAATGACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp TTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTATCATATAAAGCCTaGTTGTCAATGGAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: LHGRSGRPGVQHPTPLGPVSYKA*LSMESS
Trigger: GGAGGACTCCATTGACAACAAGGCTTTATATGATAC...AGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CAA 90 bp GCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTGAGGTCCTGCAGGCCTaGCTCGTCCACATCCACCGG +
Preference number: 5 (lower is better)
Translates to: ARNTVLLAAMEARISFSGEVLQA*LVHIHR
Trigger: CCGGTGGATGTGGACGAGCAAGGCCTGCAGGACCTC...ACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATCGCGAGTGGCCGCTGTaGTCCCTCATCACCTTCACA +
Preference number: 5 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDREWPL*SLITFT
Trigger: TGTGAAGGTGATGAGGGACAACAGCGGCCACTCGCG...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp AGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATCGCGAGTGGCCGCTGTaGTCCCTCATCACCTTCACA +
Preference number: 5 (lower is better)
Translates to: SLQGLRAESQKHCPFGSHREWPL*SLITFT
Trigger: TGTGAAGGTGATGAGGGACAACAGCGGCCACTCGCG...ATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp GGCCAGTGCCACGTAGAGTGGCTTGGTGCCCACGATGCGCCCGTTCATCTCTGTTCATGCTTCTCAAAGTaGACAAAGCCAAAGCACCGC +
Preference number: 5 (lower is better)
Translates to: GQCHVEWLGAHDAPVHLCSCFSK*TKPKHR
Trigger: GCGGTGCTTTGGCTTTGTCAACTTTGAGAAGCATGA...ACAGAGATGAACGGGCGCATCGTGGGCACCAAGCCACTCTACGTGGCACTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217074.9
CDS-3UTR CAA 90 bp GCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCATCCTACCTCATGCTTCTCAAAGTaGACAAAGCCAAAGCACCGC +
Preference number: 5 (lower is better)
Translates to: AEEHLHGRSGRPGVQHPTSCFSK*TKPKHR
Trigger: GCGGTGCTTTGGCTTTGTCAACTTTGAGAAGCATGA...GGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CAA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCCGCTGCATGTACTGGTaGGTCAAGATGGCCTTCCGC +
Preference number: 5 (lower is better)
Translates to: RVCRALGLRARNTVLLAARCMYW*VKMAFR
Trigger: GCGGAAGGCCATCTTGACCAACCAGTACATGCAGCG...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp GCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTGCTGCTGAGGAACATTaGCACGGCAGGAGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: ARNTVLLAAMEARISFSGAAEEH*HGRSGR
Trigger: CCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGC...ACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp TTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTAGCATGCCCGTGATCTaGCCAGCCAGCTGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: LGLRARNTVLLAAMEARISMPVI*PASWVW
Trigger: CCACACCCAGCTGGCTGGCAAGATCACGGGCATGCT...AATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp GCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCAGAAACACTGTCCTTTaGGCAGCCATGGAAGCGAGG +
Preference number: 5 (lower is better)
Translates to: AQPAPGPDRCYVLLRNICRNTVL*AAMEAR
Trigger: CCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCT...GCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CAA 90 bp GCCGGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTGAGTACCAAAGTGACCCACAAAGCTaGCAAGAGAGGATGTTCCCA +
Preference number: 5 (lower is better)
Translates to: AGLVYSILPHWVLWSEYQSDPQS*QERMFP
Trigger: TGGGAACATCCTCTCTTGCAAGCTTTGTGGGTCACT...TTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217074.9
CDS CCA 90 bp GTATTTACCAAACGCACAGATGCCCCACCTGCCCGCATTGAGCACTaGAAACTGGTGAACAGCAGCTTCCTCCCGTTCAGGAGAGGTGTG +
Preference number: 5 (lower is better)
Translates to: VFTKRTDAPPARIEH*KLVNSSFLPFRRGV
Trigger: CACACCTCTCCTGAACGGGAGGAAGCTGCTGTTCACCAGTTTCCAGTGCTCAATGCGGGCAGGTGGGGCATCTGTGCGTTTGGTAAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465761.1
CDS-3UTR CAA 90 bp GCTCCTGTCCTGGGATGTGCACAGCCGGCTCCTGGACCCGATAGGTGCTATGTGCGAATAGGCTGGCCTTaGAGCATCTCAAAGTTCATT +
Preference number: 5 (lower is better)
Translates to: APVLGCAQPAPGPDRCYVRIGWP*SISKFI
Trigger: AATGAACTTTGAGATGCTCAAAGGCCAGCCTATTCG...CACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CAA 90 bp AGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATACAAAGCCAAACCCCTaGCTGTGGCCACCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: SLQGLRAESQKHCPFGSHTKPNP*LWPPSV
Trigger: GACAGAGGGTGGCCACAGCAAGGGGTTTGGCTTTGT...ATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000476056.6
CDS-3UTR CAA 90 bp GCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTCCCAATCATCTGCTTTaGCTCATGCAGGGGCGCCGC +
Preference number: 5 (lower is better)
Translates to: AESQKHCPFGSHGSEDFLPNHLL*LMQGRR
Trigger: GCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGGG...AAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp CTTTCTACTTCCTGTAAGTCCCACGAGGTCCTTTCCCAAACCATGCTCCTCAGAAGCATGCCCGTGATCTaGCCAGCCAGCTGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: LSTSCKSHEVLSQTMLLRSMPVI*PASWVW
Trigger: CCACACCCAGCTGGCTGGCAAGATCACGGGCATGCT...TCTGAGGAGCATGGTTTGGGAAAGGACCTCGTGGGACTTACAGGAAGTAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674244.1
CDS-3UTR CAA 90 bp CAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCACTGCCTCGTCTATCTaGGCATGGAGGGATTCTGGA +
Preference number: 5 (lower is better)
Translates to: QGLRAESQKHCPFGSHGSTASSI*AWRDSG
Trigger: TCCAGAATCCCTCCATGCCAAGATAGACGAGGCAGT...GCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp GTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCTGCAGCACAAAGTAGAATGGCAGTaGCCAAGGGCTACTCTCTGG +
Preference number: 5 (lower is better)
Translates to: VSVHVRLRLLHSLVCLQHKVEWQ*PRATLW
Trigger: CCAGAGAGTAGCCCTTGGCAACTGCCATTCTACTTT...GTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000674318.1
CDS-3UTR CAA 90 bp AGCATGCCCGTGATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGAAAGTAGAATGGCAGTaGCCAAGGGCTACTCTCTGG +
Preference number: 5 (lower is better)
Translates to: SMPVILPASWVWTSWIRGKVEWQ*PRATLW
Trigger: CCAGAGAGTAGCCCTTGGCAACTGCCATTCTACTTT...CCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATCACGGGCATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000674244.1
ENST00000674318.1
CDS TCA 90 bp TCATATGGACCACGGCCTTCTGGGCTTCCTCATGCTTCTCAAAGTTaGCAAAGCCAAAGCACCGCGAGTGGCCGCTGTTGTCCCTCATCA +
Preference number: 5 (lower is better)
Translates to: SYGPRPSGLPHASQS*QSQSTASGRCCPSS
Trigger: TGATGAGGGACAACAGCGGCCACTCGCGGTGCTTTGGCTTTGTCAACTTTGAGAAGCATGAGGAAGCCCAGAAGGCCGTGGTCCATATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp TGCTATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACCGAATAGGCTGGCCTTaGAGCATCTCAAAGTTCATT +
Preference number: 5 (lower is better)
Translates to: CYVLLRNICTAGAAGLVYRIGWP*SISKFI
Trigger: AATGAACTTTGAGATGCTCAAAGGCCAGCCTATTCG...GTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CAA 90 bp GGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGAGTCCTCCAGGTTCTaGATGAAGATGTTGCCCACA +
Preference number: 5 (lower is better)
Translates to: GLRAESQKHCPFGSHGSEESSRF*MKMLPT
Trigger: TGTGGGCAACATCTTCATCAAGAACCTGGAGGACTC...CTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp CAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCTGGTGGCCGGACCATaGAGGCACCTGGAGGGTAGG +
Preference number: 5 (lower is better)
Translates to: QKHCPFGSHGSEDFLFWFLVAGP*RHLEGR
Trigger: CCTACCCTCCAGGTGCCTCAATGGTCCGGCCACCAG...AAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000476056.6
CDS-3UTR CAA 90 bp AATGAACCCTTCCAGCAAGTCTATGAAGTGATATCCTCATGTGGTAGGTGGGCAGCTGCTGAGGAACATTaGCACGGCAGGAGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: NEPFQQVYEVISSCGRWAAAEEH*HGRSGR
Trigger: CCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGC...TGCCCACCTACCACATGAGGATATCACTTCATAGACTTGCTGGAAGGGTTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
CDS-3UTR CAA 90 bp GCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTCCCAATCATCTGCTTTaGCTCATGCAGGGGCGCCGC +
Preference number: 5 (lower is better)
Translates to: ARNTVLLAAMEARISFSGPNHLL*LMQGRR
Trigger: GCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGGG...ACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCACTGCCTCGTCTATCTaGGCATGGAGGGATTCTGGA +
Preference number: 5 (lower is better)
Translates to: RVCRALGLRARNTVLLAATASSI*AWRDSG
Trigger: TCCAGAATCCCTCCATGCCAAGATAGACGAGGCAGT...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp TTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGAAACACTGTCCTTTaGGCAGCCATGGAAGCGAGG +
Preference number: 5 (lower is better)
Translates to: LQGLRAESQKHCPFGSHGRNTVL*AAMEAR
Trigger: CCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCT...TCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTACTGGTGGCCGGACCATaGAGGCACCTGGGGCATGGC +
Preference number: 5 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLLVAGP*RHLGHG
Trigger: GCCATGCCCCAGGTGCCTCAATGGTCCGGCCACCAG...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537323.5
CDS TCA 90 bp ACATCATGTATTTACCAAACGCACAGATGCCCCACCTGCCCGCATTaGGCACTGGAAACTGGTGAACAGCAGCTTCCTCCCGTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: TSCIYQTHRCPTCPH*ALETGEQQLPPVQE
Trigger: CTCCTGAACGGGAGGAAGCTGCTGTTCACCAGTTTCCAGTGCTCAATGCGGGCAGGTGGGGCATCTGTGCGTTTGGTAAATACATGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465761.1
CDS CCA 90 bp TGCTGGTGGCTAGCTGCGTGTCTTCCATTGGCTCACCACTGTGCTTaGTACTTTACACACGTCTCATTCAGGCCCATGCTCAGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: CWWLAACLPLAHHCA*YFTHVSFRPMLRRG
Trigger: TCCTCTTCTGAGCATGGGCCTGAATGAGACGTGTGTAAAGTACCAAGCACAGTGGTGAGCCAATGGAAGACACGCAGCTAGCCACCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372819.5
ENST00000372824.5
CDS-3UTR CAA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCGAGTCCTCCAGGTTCTaGATGAAGATGTTGCCCACA +
Preference number: 5 (lower is better)
Translates to: RVCRALGLRARNTVLLAAESSRF*MKMLPT
Trigger: TGTGGGCAACATCTTCATCAAGAACCTGGAGGACTC...GGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp GAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCATCCCATTCATGGTGTaGATGGCCTGCTGTGCGGCC +
Preference number: 5 (lower is better)
Translates to: ESQKHCPFGSHGSEDFLFIPFMV*MACCAA
Trigger: GGCCGCACAGCAGGCCATCAACACCATGAATGGGAT...GAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp CAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCTCATGCTTCTCAAAGTaGACAAAGCCAAAGCACCGC +
Preference number: 5 (lower is better)
Translates to: QGLRAESQKHCPFGSHGSSCFSK*TKPKHR
Trigger: GCGGTGCTTTGGCTTTGTCAACTTTGAGAAGCATGA...GCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp GATGGAGTGACTTGTCCGGATCGCAGGGTTGATGCCCTTTCCACCGCACCACTGAACTCTTTCCTCAGTTaGTCGTCATCAATGGAGTCG +
Preference number: 5 (lower is better)
Translates to: DGVTCPDRRVDALSTAPLNSFLS*SSSMES
Trigger: CGACTCCATTGATGACGACAAACTGAGGAAAGAGTT...CAGTGGTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGACAAGTCACTCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS-3UTR CAA 90 bp GTTTCAGTGCATGTACGCCTTCGGCTGCTCCATAGCCTGGTGTGCCTGCAGCACAACTCTTTCCTCAGTTaGTCGTCATCAATGGAGTCG +
Preference number: 5 (lower is better)
Translates to: VSVHVRLRLLHSLVCLQHNSFLS*SSSMES
Trigger: CGACTCCATTGATGACGACAAACTGAGGAAAGAGTT...GTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp GAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCACAAAGCCAAACCCCTaGCTGTGGCCACCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: ESQKHCPFGSHGSEDFLFTKPNP*LWPPSV
Trigger: GACAGAGGGTGGCCACAGCAAGGGGTTTGGCTTTGT...GAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000476056.6
CDS-3UTR CAA 90 bp GAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGACAAAGCCAAACCCCTaGCTGTGGCCACCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: EPETLSFWQPWKRGFPFLTKPNP*LWPPSV
Trigger: GACAGAGGGTGGCCACAGCAAGGGGTTTGGCTTTGT...CAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000476056.6
CDS-3UTR CAA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAGCTGCTGAGGAACATTaGCACGGCAGGAGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLAAEEH*HGRSGR
Trigger: CCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGC...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp AATGAACCCTTCCAGCAAGTCTATGAAGTGATATCCTCATGTGGTAGGTGGGCAGTCCGGATCGCAGGGTaGATGCCCTTTCCACCGCAC +
Preference number: 5 (lower is better)
Translates to: NEPFQQVYEVISSCGRWAVRIAG*MPFPPH
Trigger: GTGCGGTGGAAAGGGCATCAACCCTGCGATCCGGAC...TGCCCACCTACCACATGAGGATATCACTTCATAGACTTGCTGGAAGGGTTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372826.6
ENST00000490798.6
ENST00000674318.1
CDS-3UTR CAA 90 bp TATGTGCTGCTGAGGAACATTTGCACGGCAGGAGCGGCCGGCCTGGTGTACAGCGAAGAAGCTGAGGTATaGATGTTGCTGCCATTTTCA +
Preference number: 5 (lower is better)
Translates to: YVLLRNICTAGAAGLVYSEEAEV*MLLPFS
Trigger: TGAAAATGGCAGCAACATCAATACCTCAGCTTCTTC...GCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674318.1
CDS-3UTR CAA 90 bp AGCATGCCCGTGATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTCATGGCAGCCTTACTaGATGAAGTTGCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: SMPVILPASWVWTSWIRGSWQPY*MKLLKK
Trigger: CTTCTTCAGCAACTTCATCAAGTAAGGCTGCCATGA...CCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATCACGGGCATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674318.1
CDS CCA 90 bp GTAGGCAGCTTGTGGTGCAGACACCACAGAGAGAGAAAAGTTGGATaGAGTGGTGGGAATAATCAGGGTGGCACACTGTGCCTAGAAGCT +
Preference number: 5 (lower is better)
Translates to: VGSLWCRHHRERKVG*SGGNNQGGTLCLEA
Trigger: AGCTTCTAGGCACAGTGTGCCACCCTGATTATTCCCACCACTCCATCCAACTTTTCTCTCTCTGTGGTGTCTGCACCACAAGCTGCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372819.5
ENST00000372824.5
ENST00000479873.5
CDS-3UTR CAA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATGAGTCCTCCAGGTTCTaGATGAAGATGTTGCCCACA +
Preference number: 5 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDESSRF*MKMLPT
Trigger: TGTGGGCAACATCTTCATCAAGAACCTGGAGGACTC...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp CAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCTCATATAAAGCCTTGTaGTCAATGGAGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: QGLRAESQKHCPFGSHGSSYKAL*SMESSR
Trigger: CCTGGAGGACTCCATTGACAACAAGGCTTTATATGA...GCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp GGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGAACTCTTTCCTCAGTTaGTCGTCATCAATGGAGTCG +
Preference number: 5 (lower is better)
Translates to: GLRAESQKHCPFGSHGSENSFLS*SSSMES
Trigger: CGACTCCATTGATGACGACAAACTGAGGAAAGAGTT...CTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp CTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCAGTGCATCGCTGCATGTACTGGTaGGTCAAGATGGCCTTCCGC +
Preference number: 5 (lower is better)
Translates to: LSFWQPWKRGFPFLVSVHRCMYW*VKMAFR
Trigger: GCGGAAGGCCATCTTGACCAACCAGTACATGCAGCG...ATGCACTGAAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp TGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGAGCCCAGGAGGGGGTaGCTCAGGGTCCGCATGGTG +
Preference number: 5 (lower is better)
Translates to: WVTNLHSHTEPKYRYRLIEPRRG*LRVRMV
Trigger: CACCATGCGGACCCTGAGCAACCCCCTCCTGGGCTC...AATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGCTGGTGGCCGGACCATaGAGGCACCTGGAGGGTAGG +
Preference number: 5 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGLVAGP*RHLEGR
Trigger: CCTACCCTCCAGGTGCCTCAATGGTCCGGCCACCAG...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000476056.6
CDS-3UTR CAA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGGCTGCTGAGGAACATTaGCACGGCAGGAGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGAAEEH*HGRSGR
Trigger: CCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGC...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTACCCAATCATCTGCTTTaGCTCATGCAGGGGCGCCGC +
Preference number: 5 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVPNHLL*LMQGRR
Trigger: GCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGGG...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp CCGGCTCCTGGACCCGATAGGTGCTATGTGCTGCTGAGGAACATTTGCACGGCATTTTGTCTGCACTTTTaGCAGTTTCAAGCCACTCCT +
Preference number: 5 (lower is better)
Translates to: PAPGPDRCYVLLRNICTAFCLHF*QFQATP
Trigger: AGGAGTGGCTTGAAACTGCAAAAAGTGCAGACAAAA...TGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674318.1
CDS GCA 90 bp AGAAAAGTTGGATGGAGTGGTGGGAATAATCAGGGTGGCACACTGTaGCTAGAAGCTTCCAGGGCCACCAAGAGAATGGGAAGGGAAACT +
Preference number: 5 (lower is better)
Translates to: RKVGWSGGNNQGGTL*LEASRATKRMGRET
Trigger: AGTTTCCCTTCCCATTCTCTTGGTGGCCCTGGAAGCTTCTAGGCACAGTGTGCCACCCTGATTATTCCCACCACTCCATCCAACTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372819.5
ENST00000372824.5
ENST00000479873.5
CDS-3UTR CAA 90 bp CTTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTCATGCTTCTCAAAGTaGACAAAGCCAAAGCACCGC +
Preference number: 5 (lower is better)
Translates to: LRAESQKHCPFGSHGSEDSCFSK*TKPKHR
Trigger: GCGGTGCTTTGGCTTTGTCAACTTTGAGAAGCATGA...ATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTACGCTGCATGTACTGGTaGGTCAAGATGGCCTTCCGC +
Preference number: 5 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVRCMYW*VKMAFR
Trigger: GCGGAAGGCCATCTTGACCAACCAGTACATGCAGCG...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp GAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCACGCTGCATGTACTGGTaGGTCAAGATGGCCTTCCGC +
Preference number: 5 (lower is better)
Translates to: ETLSFWQPWKRGFPFLVSRCMYW*VKMAFR
Trigger: GCGGAAGGCCATCTTGACCAACCAGTACATGCAGCG...TGAAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAGCATGCCCGTGATCTaGCCAGCCAGCTGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGSMPVI*PASWVW
Trigger: CCACACCCAGCTGGCTGGCAAGATCACGGGCATGCT...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000372822.2
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp CTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTAGAAACACTGTCCTTTaGGCAGCCATGGAAGCGAGG +
Preference number: 5 (lower is better)
Translates to: LRARNTVLLAAMEARISFRNTVL*AAMEAR
Trigger: CCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCT...AAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp GATCTTGCCAGCCAGCTGGGTGTGGACATCATGGATAAGGGGGTAGAGACGCTCGCTGAGGTATTGATGTaGCTGCCATTTTCATTCATC +
Preference number: 5 (lower is better)
Translates to: DLASQLGVDIMDKGVETLAEVLM*LPFSFI
Trigger: GATGAATGAAAATGGCAGCAACATCAATACCTCAGC...GAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674318.1
CDS-3UTR CAA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAGCCAATCATCTGCTTTaGCTCATGCAGGGGCGCCGC +
Preference number: 5 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLANHLL*LMQGRR
Trigger: GCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGGC...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372822.2
CDS CCA 90 bp GAATTTTCAGAGTCACAAATCAGAGGCATCTTTGGTGATGACTGCTaGTGGCTAGCTGCGTGTCTTCCATTGGCTCACCACTGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: EFSESQIRGIFGDDC*WLAACLPLAHHCAW
Trigger: CCAAGCACAGTGGTGAGCCAATGGAAGACACGCAGCTAGCCACCAGCAGTCATCACCAAAGATGCCTCTGATTTGTGACTCTGAAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372819.5
ENST00000372824.5
CDS-3UTR CAA 90 bp GGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATCCCATTCATGGTGTaGATGGCCTGCTGTGCGGCC +
Preference number: 5 (lower is better)
Translates to: GWVTNLHSHTEPKYRYRLIPFMV*MACCAA
Trigger: GGCCGCACAGCAGGCCATCAACACCATGAATGGGAT...TAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS GCA 90 bp CAAGAATTTTCAGAGTCACAAATCAGAGGCATCTTTGGTGATGACTaGTGGTGGCTAGCTGCGTGTCTTCCATTGGCTCACCACTGTGCT +
Preference number: 5 (lower is better)
Translates to: QEFSESQIRGIFGDD*WWLAACLPLAHHCA
Trigger: AGCACAGTGGTGAGCCAATGGAAGACACGCAGCTAGCCACCAGCAGTCATCACCAAAGATGCCTCTGATTTGTGACTCTGAAAATTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372819.5
ENST00000372824.5
CDS GCA 90 bp AAAGCTCCTTCCTCCCATCTCAGGATGTCCATTAGCCCTGAATCCTaGAGGGCAAAGATCTTAGATTTCAATCTTGGCTCCCTGTCAGCT +
Preference number: 5 (lower is better)
Translates to: KAPSSHLRMSISPES*RAKILDFNLGSLSA
Trigger: AGCTGACAGGGAGCCAAGATTGAAATCTAAGATCTTTGCCCTGCAGGATTCAGGGCTAATGGACATCCTGAGATGGGAGGAAGGAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372824.5
CDS-3UTR CAA 90 bp ACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAAAAGCATGCCCGTGATCTaGCCAGCCAGCTGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: TNLHSHTEPKYRYRLIGKSMPVI*PASWVW
Trigger: CCACACCCAGCTGGCTGGCAAGATCACGGGCATGCT...TTTCCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000372822.2
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp AAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTCAGAGAAACACTGTCCTTTaGGCAGCCATGGAAGCGAGG +
Preference number: 5 (lower is better)
Translates to: KHCPFGSHGSEDFLFWFQRNTVL*AAMEAR
Trigger: CCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCT...CTGAAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217074.9
ENST00000476056.6
ENST00000537323.5
CDS CCA 90 bp ATGTATTTTACTAGTCTTTGTACTTTCCGTCTCTGGGCCTTGGCATaGAGGGATTCTGGAGACTCCAGCATGAGCAACAGCTCTGAGTTG +
Preference number: 5 (lower is better)
Translates to: MYFTSLCTFRLWALA*RDSGDSSMSNSSEL
Trigger: CAACTCAGAGCTGTTGCTCATGCTGGAGTCTCCAGAATCCCTCCATGCCAAGGCCCAGAGACGGAAAGTACAAAGACTAGTAAAATACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372826.6
CDS-3UTR CAA 90 bp GAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGCGAATAGGCTGGCCTTaGAGCATCTCAAAGTTCATT +
Preference number: 5 (lower is better)
Translates to: EPETLSFWQPWKRGFPFLRIGWP*SISKFI
Trigger: AATGAACTTTGAGATGCTCAAAGGCCAGCCTATTCG...CAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp ACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAAATTGCCCACACCTGACTaGCGAAGTCCTGGGTCTCGC +
Preference number: 5 (lower is better)
Translates to: TNLHSHTEPKYRYRLIGKLPTPD*RSPGSR
Trigger: GCGAGACCCAGGACTTCGCAAGTCAGGTGTGGGCAA...TTTCCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp TTAGGGCTGAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTGTATCATATAAAGCCTaGTTGTCAATGGAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: LGLRARNTVLLAAMEARIVSYKA*LSMESS
Trigger: GGAGGACTCCATTGACAACAAGGCTTTATATGATAC...AATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp GCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTAACTCTTTCCTCAGTTaGTCGTCATCAATGGAGTCG +
Preference number: 5 (lower is better)
Translates to: ARNTVLLAAMEARISFSGNSFLS*SSSMES
Trigger: CGACTCCATTGATGACGACAAACTGAGGAAAGAGTT...ACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp GAGAGCCAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCAACTCTTTCCTCAGTTaGTCGTCATCAATGGAGTCG +
Preference number: 5 (lower is better)
Translates to: ESQKHCPFGSHGSEDFLFNSFLS*SSSMES
Trigger: CGACTCCATTGATGACGACAAACTGAGGAAAGAGTT...GAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS GCA 90 bp AGGATGTATTTTACTAGTCTTTGTACTTTCCGTCTCTGGGCCAGGTaGTGGAGATCAGTTGACAGAATGAACTTGGTCTCTGGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: RMYFTSLCTFRLWAR*WRSVDRMNLVSGWH
Trigger: ATGCCACCCAGAGACCAAGTTCATTCTGTCAACTGATCTCCAGCACCTGGCCCAGAGACGGAAAGTACAAAGACTAGTAAAATACATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372819.5
CDS-3UTR CAA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGACTGCCTCGTCTATCTaGGCATGGAGGGATTCTGGA +
Preference number: 5 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGTASSI*AWRDSG
Trigger: TCCAGAATCCCTCCATGCCAAGATAGACGAGGCAGT...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATCATATAAAGCCTTGTaGTCAATGGAGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVSYKAL*SMESSR
Trigger: CCTGGAGGACTCCATTGACAACAAGGCTTTATATGA...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp CAGAAACACTGTCCTTTTGGCAGCCATGGAAGCGAGGATTTCCTTTTCTGGTTTTCATATAAAGCCTTGTaGTCAATGGAGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: QKHCPFGSHGSEDFLFWFSYKAL*SMESSR
Trigger: CCTGGAGGACTCCATTGACAACAAGGCTTTATATGA...AAACCAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217074.9
ENST00000537323.5
CDS-3UTR CAA 90 bp AAGGTAATAGGCTGGATGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTAAACTCTTTCCTCAGTTaGTCGTCATCAATGGAGTCG +
Preference number: 5 (lower is better)
Translates to: KVIGWMGDQPSFTYRAQVNSFLS*SSSMES
Trigger: CGACTCCATTGATGACGACAAACTGAGGAAAGAGTT...TACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTATTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp ACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAAATTCAATCATCTGCTTTaGCTCATGCAGGGGCGCCGC +
Preference number: 5 (lower is better)
Translates to: TNLHSHTEPKYRYRLIGKFNHLL*LMQGRR
Trigger: GCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGAA...TTTCCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476056.6
CDS CCA 90 bp ATGTATTTTACTAGTCTTTGTACTTTCCGTCTCTGGGCCAGGTGCTaGAGATCAGTTGACAGAATGAACTTGGTCTCTGGGTGGCATTTT +
Preference number: 5 (lower is better)
Translates to: MYFTSLCTFRLWARC*RSVDRMNLVSGWHF
Trigger: AAAATGCCACCCAGAGACCAAGTTCATTCTGTCAACTGATCTCCAGCACCTGGCCCAGAGACGGAAAGTACAAAGACTAGTAAAATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372819.5
CDS-3UTR CAA 90 bp ACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGAAAAGAAACACTGTCCTTTaGGCAGCCATGGAAGCGAGG +
Preference number: 5 (lower is better)
Translates to: TNLHSHTEPKYRYRLIGKRNTVL*AAMEAR
Trigger: CCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCT...TTTCCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000217075.7
ENST00000255136.8
ENST00000372822.2
ENST00000476056.6
ENST00000537323.5
CDS-3UTR CAA 90 bp GTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGGGGAGGATTTCCTTTTCTaGGCATGGAGGGATTCTGGA +
Preference number: 5 (lower is better)
Translates to: VTNLHSHTEPKYRYRLIGEDFLF*AWRDSG
Trigger: TCCAGAATCCCTCCATGCCAAGAAAAGGAAATCCTC...CCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217075.7
ENST00000372822.2
CDS CCA 90 bp ATCTTAGATTTCAATCTTGGCTCCCTGTCAGCTAACCCAATGACCTaGATAAAAAGGGTGACATCTTACTCCAACTTGTGCAGCTTAAGC +
Preference number: 5 (lower is better)
Translates to: ILDFNLGSLSANPMT*IKRVTSYSNLCSLS
Trigger: GCTTAAGCTGCACAAGTTGGAGTAAGATGTCACCCTTTTTATCCAGGTCATTGGGTTAGCTGACAGGGAGCCAAGATTGAAATCTAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372824.5
CDS-3UTR CAA 90 bp TGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGAGGATTTCCTTTTCTaGGCATGGAGGGATTCTGGA +
Preference number: 5 (lower is better)
Translates to: WVTNLHSHTEPKYRYRLIEDFLF*AWRDSG
Trigger: TCCAGAATCCCTCCATGCCAAGAAAAGGAAATCCTC...AATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217075.7
ENST00000372822.2
CDS-3UTR CAA 90 bp TGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTCGAATAGGCTGGCCTTaGAGCATCTCAAAGTTCATT +
Preference number: 5 (lower is better)
Translates to: WVTNLHSHTEPKYRYRLIRIGWP*SISKFI
Trigger: AATGAACTTTGAGATGCTCAAAGGCCAGCCTATTCG...AATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp TGGGTGACCAACCTTCATTCACATACAGAGCCCAAGTATAGATACAGACTAATTGTATCATATAAAGCCTaGTTGTCAATGGAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: WVTNLHSHTEPKYRYRLIVSYKA*LSMESS
Trigger: GGAGGACTCCATTGACAACAAGGCTTTATATGATAC...AATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS-3UTR CAA 90 bp TTTCCTCAGTTTGTCGTCATCAATGGAGTCGTCCAGATTCTTCACATACAAGTTGTATCATATAAAGCCTaGTTGTCAATGGAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: FPQFVVINGVVQILHIQVVSYKA*LSMESS
Trigger: GGAGGACTCCATTGACAACAAGGCTTTATATGATAC...AACTTGTATGTGAAGAATCTGGACGACTCCATTGATGACGACAAACTGAGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217074.9
CDS CCA 72 bp CCACGTAAAGCGAGGCAAGCGGGTAGCCAGAACCGCTaGCGTTCATGGTGGGCAGGGGGCCGGGGCTGCGGG +
Preference number: 6 (lower is better)
Translates to: PRKARQAGSQNR*RSWWAGGRGCG
Trigger: CCCGCAGCCCCGGCCCCCTGCCCACCATGAACGCCAGCGGTTCTGGCTACCCGCTTGCCTCGCTTTACGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217073.7
ENST00000255136.8
CDS GCA 72 bp AGGCTGGGTGGGTGTCACTGGGCCACAGCCATAGTATaGAGCCTGGGCTGGAGGCTGGGGCATGGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: RLGGCHWATAIV*SLGWRLGHGRQ
Trigger: CTGCCTGCCATGCCCCAGCCTCCAGCCCAGGCTGCATACTATGGCTGTGGCCCAGTGACACCCACCCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217073.7
ENST00000255136.8
CDS CCA 72 bp GGAGCGGCCGGCCTGGTGTACAGCATCCTACCCCACTaGGTCCTGTGGTCTGAGTACCAATGTTGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: GAAGLVYSILPH*VLWSEYQCWLG
Trigger: CCCCAGCCAACATTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS TCA 72 bp GCGCCCCCAGCTCCGCCTCCCGCTCCCGTCGAGACTTaGAGTGACCCACAAAGACTTTGCGGTCATTCAGCA +
Preference number: 6 (lower is better)
Translates to: APPAPPPAPVET*SDPQRLCGHSA
Trigger: TGCTGAATGACCGCAAAGTCTTTGTGGGTCACTTCAAGTCTCGACGGGAGCGGGAGGCGGAGCTGGGGGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS TCA 72 bp GCGCCCCCAGCTCCGCCTCCCGCTCCCGTCGAGACTTaGAGTGACCCACAAAGCTTGCAAGAGAGGATGTTC +
Preference number: 6 (lower is better)
Translates to: APPAPPPAPVET*SDPQSLQERMF
Trigger: GAACATCCTCTCTTGCAAGCTTTGTGGGTCACTTCAAGTCTCGACGGGAGCGGGAGGCGGAGCTGGGGGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217074.9
CDS CCA 72 bp ACATTGGCATCTGGGGCATGGCAGGCAGGAAGTAGCTaGAGGGCTGCTGAAAGGAGCCCAGGAGGGGGTTGC +
Preference number: 6 (lower is better)
Translates to: TLASGAWQAGSS*RAAERSPGGGC
Trigger: GCAACCCCCTCCTGGGCTCCTTTCAGCAGCCCTCCAGCTACTTCCTGCCTGCCATGCCCCAGATGCCAATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674244.1
CDS CCA 72 bp GGCCTGGTGTACAGCATCCTACCCCACTGGGTCCTGTaGTCTGAGTACCAATGTTGGCTGGGGCATGGCAGG +
Preference number: 6 (lower is better)
Translates to: GLVYSILPHWVL*SEYQCWLGHGR
Trigger: CCTGCCATGCCCCAGCCAACATTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS TCA 72 bp GGTGTACAGCATCCTACCCCACTGGGTCCTGTGGTCTaGGTACCAATGTTGGCTGGGGCATGGCAGGCAGGA +
Preference number: 6 (lower is better)
Translates to: GVQHPTPLGPVV*VPMLAGAWQAG
Trigger: TCCTGCCTGCCATGCCCCAGCCAACATTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490798.6
CDS TCA 72 bp TGGGAAGTGGCAGAGCCAGGTTTCATCCCTGTGTTATaGCTGCCTCACGGGGCCCACACCAATAGGCCAGTC +
Preference number: 6 (lower is better)
Translates to: WEVAEPGFIPVL*LPHGAHTNRPV
Trigger: GACTGGCCTATTGGTGTGGGCCCCGTGAGGCAGTCATAACACAGGGATGAAACCTGGCTCTGCCACTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372819.5
ENST00000372824.5
CDS TCA 72 bp CAAAGCTGGAATTTGACCTCACGTTGGACCACCAGGTaGGGTGTTTCCCAGCAGGCTAGCCAGCTCGCAGCC +
Preference number: 6 (lower is better)
Translates to: QSWNLTSRWTTR*GVSQQASQLAA
Trigger: GGCTGCGAGCTGGCTAGCCTGCTGGGAAACACCTCACCTGGTGGTCCAACGTGAGGTCAAATTCCAGCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465761.1
CDS CCA 72 bp TTGATGGCCTGCTGTGCGGCCTCATGGGTCTCAAAATaGACAAAGCCGAAACCCCGGGAGCCATGCTCGTCA +
Preference number: 6 (lower is better)
Translates to: LMACCAASWVSK*TKPKPREPCSS
Trigger: TGACGAGCATGGCTCCCGGGGTTTCGGCTTTGTCCATTTTGAGACCCATGAGGCCGCACAGCAGGCCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS CCA 72 bp AAACGCACAGATGCCCCACCTGCCCGCATTGAGCACTaGAAACTGGTGAACAGCAGCTTCCTCCCGTTCAGG +
Preference number: 6 (lower is better)
Translates to: KRTDAPPARIEH*KLVNSSFLPFR
Trigger: CCTGAACGGGAGGAAGCTGCTGTTCACCAGTTTCCAGTGCTCAATGCGGGCAGGTGGGGCATCTGTGCGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465761.1
CDS GCA 72 bp ACACTCAGCATTTTCCCAAACTGGGAGAAGAGGTCCTaGAGGCCTTGCTCGTCCACATCCACCGGGAGGTTC +
Preference number: 6 (lower is better)
Translates to: TLSIFPNWEKRS*RPCSSTSTGRF
Trigger: GAACCTCCCGGTGGATGTGGACGAGCAAGGCCTGCAGGACCTCTTCTCCCAGTTTGGGAAAATGCTGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS GCA 72 bp AAGTGGCAGAGCCAGGTTTCATCCCTGTGTTATGACTaGCTCACGGGGCCCACACCAATAGGCCAGTCTGAG +
Preference number: 6 (lower is better)
Translates to: KWQSQVSSLCYD*LTGPTPIGQSE
Trigger: CTCAGACTGGCCTATTGGTGTGGGCCCCGTGAGGCAGTCATAACACAGGGATGAAACCTGGCTCTGCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372819.5
ENST00000372824.5
CDS CCA 72 bp CCATTCATGGTGTTGATGGCCTGCTGTGCGGCCTCATaGGTCTCAAAATGGACAAAGCCGAAACCCCGGGAG +
Preference number: 6 (lower is better)
Translates to: PFMVLMACCAAS*VSKWTKPKPRE
Trigger: CTCCCGGGGTTTCGGCTTTGTCCATTTTGAGACCCATGAGGCCGCACAGCAGGCCATCAACACCATGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS CAA 72 bp ACCACGGCCTTCTGGGCTTCCTCATGCTTCTCAAAGTaGACAAAGCCAAAGCACCGCGAGTGGCCGCTGTTG +
Preference number: 6 (lower is better)
Translates to: TTAFWASSCFSK*TKPKHREWPLL
Trigger: CAACAGCGGCCACTCGCGGTGCTTTGGCTTTGTCAACTTTGAGAAGCATGAGGAAGCCCAGAAGGCCGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS GCA 72 bp GGATGGAGTGGTGGGAATAATCAGGGTGGCACACTGTaGCTAGAAGCTTCCAGGGCCACCAAGAGAATGGGA +
Preference number: 6 (lower is better)
Translates to: GWSGGNNQGGTL*LEASRATKRMG
Trigger: TCCCATTCTCTTGGTGGCCCTGGAAGCTTCTAGGCACAGTGTGCCACCCTGATTATTCCCACCACTCCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372819.5
ENST00000372824.5
ENST00000479873.5
CDS CCA 72 bp CCCAGGGCTCGTATGGAGTGGAGCACTGAGGACATCTaGGTTCTTCTCCCAGAACTGCTCCTTCTAGGCTAT +
Preference number: 6 (lower is better)
Translates to: PRARMEWSTEDI*VLLPELLLLGY
Trigger: ATAGCCTAGAAGGAGCAGTTCTGGGAGAAGAACCCAGATGTCCTCAGTGCTCCACTCCATACGAGCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482486.1
CDS CAA 72 bp CATTTTCCCAAACTGGGAGAAGAGGTCCTGCAGGCCTaGCTCGTCCACATCCACCGGGAGGTTCTTCACGTA +
Preference number: 6 (lower is better)
Translates to: HFPKLGEEVLQA*LVHIHREVLHV
Trigger: TACGTGAAGAACCTCCCGGTGGATGTGGACGAGCAAGGCCTGCAGGACCTCTTCTCCCAGTTTGGGAAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS CAA 90 bp CACACTCAGCATTTTCCCAAACTGGGAGAAGAGGTCCTGCAGGCCTaGCTCGTCCACATCCACCGGGAGGTTCTTCACGTAGATGTTGGT +
Preference number: 6 (lower is better)
Translates to: HTQHFPKLGEEVLQA*LVHIHREVLHVDVG
Trigger: ACCAACATCTACGTGAAGAACCTCCCGGTGGATGTGGACGAGCAAGGCCTGCAGGACCTCTTCTCCCAGTTTGGGAAAATGCTGAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS CAA 90 bp TTCATATGGACCACGGCCTTCTGGGCTTCCTCATGCTTCTCAAAGTaGACAAAGCCAAAGCACCGCGAGTGGCCGCTGTTGTCCCTCATC +
Preference number: 6 (lower is better)
Translates to: FIWTTAFWASSCFSK*TKPKHREWPLLSLI
Trigger: GATGAGGGACAACAGCGGCCACTCGCGGTGCTTTGGCTTTGTCAACTTTGAGAAGCATGAGGAAGCCCAGAAGGCCGTGGTCCATATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217073.7
ENST00000217074.9
ENST00000255136.8
ENST00000537323.5
CDS CAA 90 bp CTGCTGGTGGCTAGCTGCGTGTCTTCCATTGGCTCACCACTGTGCTaGGTACTTTACACACGTCTCATTCAGGCCCATGCTCAGAAGAGG +
Preference number: 6 (lower is better)
Translates to: LLVASCVSSIGSPLC*VLYTRLIQAHAQKR
Trigger: CCTCTTCTGAGCATGGGCCTGAATGAGACGTGTGTAAAGTACCAAGCACAGTGGTGAGCCAATGGAAGACACGCAGCTAGCCACCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372819.5
ENST00000372824.5
CDS GCA 72 bp CAGCAGCATCCCATTCATGGTGTTGATGGCCTGCTGTaGGGCCTCATGGGTCTCAAAATGGACAAAGCCGAA +
Preference number: 6 (lower is better)
Translates to: QQHPIHGVDGLL*GLMGLKMDKAE
Trigger: TTCGGCTTTGTCCATTTTGAGACCCATGAGGCCGCACAGCAGGCCATCAACACCATGAATGGGATGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS CAA 90 bp AGAGTTTGCAGGGCCTTAGGGCTGAGAGCCAGAAACACTGTCCTTTaGGCAGCCATGGAAGCGAGGATTTCCTTTTCTTGGCATGGAGGG +
Preference number: 6 (lower is better)
Translates to: RVCRALGLRARNTVL*AAMEARISFSWHGG
Trigger: CCCTCCATGCCAAGAAAAGGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217075.7
ENST00000372822.2
ENST00000482486.1
CDS GCA 72 bp GTGGCTAGCTGCGTGTCTTCCATTGGCTCACCACTGTaGTTGGTACTTTACACACGTCTCATTCAGGCCCAT +
Preference number: 6 (lower is better)
Translates to: VASCVSSIGSPL*LVLYTRLIQAH
Trigger: ATGGGCCTGAATGAGACGTGTGTAAAGTACCAAGCACAGTGGTGAGCCAATGGAAGACACGCAGCTAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372819.5
ENST00000372824.5
CDS CCA 72 bp CTAGCTGCGTGTCTTCCATTGGCTCACCACTGTGCTTaGTACTTTACACACGTCTCATTCAGGCCCATGCTC +
Preference number: 6 (lower is better)
Translates to: LAACLPLAHHCA*YFTHVSFRPML
Trigger: GAGCATGGGCCTGAATGAGACGTGTGTAAAGTACCAAGCACAGTGGTGAGCCAATGGAAGACACGCAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372819.5
ENST00000372824.5
CDS CCA 72 bp ACTAGTCTTTGTACTTTCCGTCTCTGGGCCTTGGCATaGAGGGATTCTGGAGACTCCAGCATGAGCAACAGC +
Preference number: 6 (lower is better)
Translates to: TSLCTFRLWALA*RDSGDSSMSNS
Trigger: GCTGTTGCTCATGCTGGAGTCTCCAGAATCCCTCCATGCCAAGGCCCAGAGACGGAAAGTACAAAGACTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372826.6
CDS CAA 90 bp TTCCGTCTCTGGGCCAGGTGCTGGAGATCAGTTGACAGAATGAACTaGGTCTCTGGGTGGCATTTTAAGCTGAAATCTTGGCATGGAGGG +
Preference number: 6 (lower is better)
Translates to: FRLWARCWRSVDRMN*VSGWHFKLKSWHGG
Trigger: CCCTCCATGCCAAGATTTCAGCTTAAAATGCCACCCAGAGACCAAGTTCATTCTGTCAACTGATCTCCAGCACCTGGCCCAGAGACGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372819.5
CDS GCA 72 bp TCATTCAGCAGCATCCCATTCATGGTGTTGATGGCCTaGTGTGCGGCCTCATGGGTCTCAAAATGGACAAAG +
Preference number: 6 (lower is better)
Translates to: SFSSIPFMVLMA*CAASWVSKWTK
Trigger: CTTTGTCCATTTTGAGACCCATGAGGCCGCACAGCAGGCCATCAACACCATGAATGGGATGCTGCTGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217073.7
ENST00000255136.8
ENST00000537323.5
CDS GCA 72 bp TCAGAGTCACAAATCAGAGGCATCTTTGGTGATGACTaGTGGTGGCTAGCTGCGTGTCTTCCATTGGCTCAC +
Preference number: 6 (lower is better)
Translates to: SESQIRGIFGDD*WWLAACLPLAH
Trigger: GTGAGCCAATGGAAGACACGCAGCTAGCCACCAGCAGTCATCACCAAAGATGCCTCTGATTTGTGACTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372819.5
ENST00000372824.5
CDS GCA 72 bp TCCAGTCTGACCAGCGTTTTAAGACAAGATAACAGGTaGCTAGAGAATAGAGCCAGCTTGGCCACGGTCACC +
Preference number: 6 (lower is better)
Translates to: SSLTSVLRQDNR*LENRASLATVT
Trigger: GGTGACCGTGGCCAAGCTGGCTCTATTCTCTAGGCACCTGTTATCTTGTCTTAAAACGCTGGTCAGACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465761.1
CDS CCA 72 bp TTGTGGTGCAGACACCACAGAGAGAGAAAAGTTGGATaGAGTGGTGGGAATAATCAGGGTGGCACACTGTGC +
Preference number: 6 (lower is better)
Translates to: LWCRHHRERKVG*SGGNNQGGTLC
Trigger: GCACAGTGTGCCACCCTGATTATTCCCACCACTCCATCCAACTTTTCTCTCTCTGTGGTGTCTGCACCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372819.5
ENST00000372824.5
ENST00000479873.5
CDS CCA 72 bp CTAACATCAGGTACTTTTAATGACTGGGCCTGGTATTaGTGGTCAGCCCATCTCAGCAATGTGTCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: LTSGTFNDWAWY*WSAHLSNVSRA
Trigger: GGCCCTGGACACATTGCTGAGATGGGCTGACCACCAATACCAGGCCCAGTCATTAAAAGTACCTGATGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482486.1
CDS GCA 72 bp TTCAAAGCCAGCTCGTGTCTACCTAGAGCCCCAAACTaGATAAGCACCAGGATTGTACACCTTAGTCCCTCA +
Preference number: 6 (lower is better)
Translates to: FKASSCLPRAPN*ISTRIVHLSPS
Trigger: TGAGGGACTAAGGTGTACAATCCTGGTGCTTATGCAGTTTGGGGCTCTAGGTAGACACGAGCTGGCTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372819.5
ENST00000372824.5
ENST00000479873.5
CDS CCA 72 bp ACTAGTCTTTGTACTTTCCGTCTCTGGGCCAGGTGCTaGAGATCAGTTGACAGAATGAACTTGGTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: TSLCTFRLWARC*RSVDRMNLVSG
Trigger: CCCAGAGACCAAGTTCATTCTGTCAACTGATCTCCAGCACCTGGCCCAGAGACGGAAAGTACAAAGACTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372819.5
CDS TCA 72 bp GAGAGGAATGTTCTTACCGTGGTGGCCTTTAATGGGTaGCATCTTTCTACTTCCTGTAAGTCCCACGAGGTC +
Preference number: 6 (lower is better)
Translates to: ERNVLTVVAFNG*HLSTSCKSHEV
Trigger: GACCTCGTGGGACTTACAGGAAGTAGAAAGATGTCACCCATTAAAGGCCACCACGGTAAGAACATTCCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372824.5
CDS CAA 72 bp TGGGCCAGGTGCTGGAGATCAGTTGACAGAATGAACTaGGTCTCTGGGTGGCATTTTAAGCTGAAATCTTGG +
Preference number: 6 (lower is better)
Translates to: WARCWRSVDRMN*VSGWHFKLKSW
Trigger: CCAAGATTTCAGCTTAAAATGCCACCCAGAGACCAAGTTCATTCTGTCAACTGATCTCCAGCACCTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372819.5
CDS CCA 72 bp GATCTTCTAACATCAGGTACTTTTAATGACTGGGCCTaGTATTGGTGGTCAGCCCATCTCAGCAATGTGTCC +
Preference number: 6 (lower is better)
Translates to: DLLTSGTFNDWA*YWWSAHLSNVS
Trigger: GGACACATTGCTGAGATGGGCTGACCACCAATACCAGGCCCAGTCATTAAAAGTACCTGATGTTAGAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482486.1
CDS TCA 72 bp GGATTGTACACCTTAGTCCCTCAAGATAGTTTCAAGTaGGCGTGCAATTCACTCTTACAGAGGAGGGCCTTT +
Preference number: 6 (lower is better)
Translates to: GLYTLVPQDSFK*ACNSLLQRRAF
Trigger: AAAGGCCCTCCTCTGTAAGAGTGAATTGCACGCTCACTTGAAACTATCTTGAGGGACTAAGGTGTACAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372819.5
ENST00000372824.5
ENST00000479873.5
CDS GCA 72 bp TTTACTAGTCTTTGTACTTTCCGTCTCTGGGCCAGGTaGTGGAGATCAGTTGACAGAATGAACTTGGTCTCT +
Preference number: 6 (lower is better)
Translates to: FTSLCTFRLWAR*WRSVDRMNLVS
Trigger: AGAGACCAAGTTCATTCTGTCAACTGATCTCCAGCACCTGGCCCAGAGACGGAAAGTACAAAGACTAGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372819.5
CDS CCA 72 bp TTCAATCTTGGCTCCCTGTCAGCTAACCCAATGACCTaGATAAAAAGGGTGACATCTTACTCCAACTTGTGC +
Preference number: 6 (lower is better)
Translates to: FNLGSLSANPMT*IKRVTSYSNLC
Trigger: GCACAAGTTGGAGTAAGATGTCACCCTTTTTATCCAGGTCATTGGGTTAGCTGACAGGGAGCCAAGATTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372824.5
CDS CAA 72 bp AGTGAGCGTGCAATTCACTCTTACAGAGGAGGGCCTTaGGTCAACAATATAGCCAGAGGAATTTCACCTTCT +
Preference number: 6 (lower is better)
Translates to: SERAIHSYRGGP*VNNIARGISPS
Trigger: AGAAGGTGAAATTCCTCTGGCTATATTGTTGACCAAAGGCCCTCCTCTGTAAGAGTGAATTGCACGCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372819.5
ENST00000372824.5
ENST00000479873.5
CDS CAA 90 bp ATAGTTTCAAGTGAGCGTGCAATTCACTCTTACAGAGGAGGGCCTTaGGTCAACAATATAGCCAGAGGAATTTCACCTTCTCAGCTTTGC +
Preference number: 6 (lower is better)
Translates to: IVSSERAIHSYRGGP*VNNIARGISPSQLC
Trigger: GCAAAGCTGAGAAGGTGAAATTCCTCTGGCTATATTGTTGACCAAAGGCCCTCCTCTGTAAGAGTGAATTGCACGCTCACTTGAAACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372819.5
ENST00000372824.5
ENST00000479873.5
CDS CCA 72 bp TGGAGATCAGTTGACAGAATGAACTTGGTCTCTGGGTaGCATTTTAAGCTGAAATCTTGGCATGGAGGGATT +
Preference number: 6 (lower is better)
Translates to: WRSVDRMNLVSG*HFKLKSWHGGI
Trigger: AATCCCTCCATGCCAAGATTTCAGCTTAAAATGCCACCCAGAGACCAAGTTCATTCTGTCAACTGATCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372819.5
CDS CCA 72 bp AGGATGTATTTTACTAGTCTTTGTACTTTCCGTCTCTaGGCCAGGTGCTGGAGATCAGTTGACAGAATGAAC +
Preference number: 6 (lower is better)
Translates to: RMYFTSLCTFRL*ARCWRSVDRMN
Trigger: GTTCATTCTGTCAACTGATCTCCAGCACCTGGCCCAGAGACGGAAAGTACAAAGACTAGTAAAATACATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372819.5
CDS CCA 72 bp GCAACTGCTAAAAGGAGAGGAATGTTCTTACCGTGGTaGCCTTTAATGGGTGACATCTTTCTACTTCCTGTA +
Preference number: 6 (lower is better)
Translates to: ATAKRRGMFLPW*PLMGDIFLLPV
Trigger: TACAGGAAGTAGAAAGATGTCACCCATTAAAGGCCACCACGGTAAGAACATTCCTCTCCTTTTAGCAGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372824.5
CDS CCA 72 bp ACACTTGATCTTCTAACATCAGGTACTTTTAATGACTaGGCCTGGTATTGGTGGTCAGCCCATCTCAGCAAT +
Preference number: 6 (lower is better)
Translates to: TLDLLTSGTFND*AWYWWSAHLSN
Trigger: ATTGCTGAGATGGGCTGACCACCAATACCAGGCCCAGTCATTAAAAGTACCTGATGTTAGAAGATCAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482486.1
CDS CAA 90 bp GCCTTTGGTCAACAATATAGCCAGAGGAATTTCACCTTCTCAGCTTaGCAAGAATTTTCAGAGTCACAAATCAGAGGCATCTTTGGTGAT +
Preference number: 6 (lower is better)
Translates to: AFGQQYSQRNFTFSA*QEFSESQIRGIFGD
Trigger: ATCACCAAAGATGCCTCTGATTTGTGACTCTGAAAATTCTTGCAAAGCTGAGAAGGTGAAATTCCTCTGGCTATATTGTTGACCAAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372819.5
ENST00000372824.5
CDS CAA 72 bp CAACAATATAGCCAGAGGAATTTCACCTTCTCAGCTTaGCAAGAATTTTCAGAGTCACAAATCAGAGGCATC +
Preference number: 6 (lower is better)
Translates to: QQYSQRNFTFSA*QEFSESQIRGI
Trigger: GATGCCTCTGATTTGTGACTCTGAAAATTCTTGCAAAGCTGAGAAGGTGAAATTCCTCTGGCTATATTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372819.5
ENST00000372824.5