Pregenerated sensors for PABIR3 (Homo sapiens)
Ensembl gene IDs: ENSG00000156500Ensembl transcript IDs: ENST00000370784.8, ENST00000370785.4, ENST00000414371.6, ENST00000460216.5, ENST00000463842.2, ENST00000470657.5, ENST00000475361.1, ENST00000482240.5, ENST00000494709.1, ENST00000623326.4, ENST00000642481.1, ENST00000643150.1, ENST00000644752.1, ENST00000645176.1, ENST00000645256.1, ENST00000645288.1, ENST00000645433.2, ENST00000646004.1, ENST00000647516.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGAGGGGCTCCTCACCTCCCAGACGATGGGCGGCCAGGCAGAGATaGTCCTCACTTCCCAGACGGGGTGGCGGCCGGGCAGAGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: QRGSSPPRRWAARQR*SSLPRRGGGRAEAA Trigger: TGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGCATCTCTGCCTGGCCGCCCATCGTCTGGGAGGTGAGGAGCCCCTCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000642481.1 ENST00000644752.1 ENST00000645176.1 ENST00000645256.1 |
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| CDS TCA 90 bp | TCAGGTGTGGCTGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTaGGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGG | + |
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Preference number: 5 (lower is better) Translates to: SGVAARACNRRHSAG*GRRIRQGGCSEPRW Trigger: CCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCGCAGCCACACCTGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000642481.1 ENST00000644752.1 ENST00000645176.1 ENST00000645256.1 |
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| CDS CCA 90 bp | CTAGATGGGATGGCGGCCGGGAAGAGGCGCTCCTCACTTCCTAGATaGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCAGACTGGG | + |
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Preference number: 5 (lower is better) Translates to: LDGMAAGKRRSSLPR*DGGRAETLLTFQTG Trigger: CCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCGGCCGCCATCCCATCTAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000460216.5 ENST00000642481.1 ENST00000644752.1 ENST00000645176.1 ENST00000645256.1 |
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| CDS TCA 90 bp | GAACACAAAGTTAGGCAGAACTGGCTCCGAACCGCCTATCTCCCATaGTCGGGGCCTCTAACGATGAGAAGATCCCCCACCTCCAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: EHKVRQNWLRTAYLP*SGPLTMRRSPTSKS Trigger: AGACTTGGAGGTGGGGGATCTTCTCATCGTTAGAGGCCCCGATCATGGGAGATAGGCGGTTCGGAGCCAGTTCTGCCTAACTTTGTGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000370784.8 ENST00000370785.4 ENST00000470657.5 ENST00000475361.1 ENST00000642481.1 ENST00000643150.1 ENST00000644752.1 ENST00000645176.1 ENST00000646004.1 |
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| CDS GCA 90 bp | CTAGACTTGACAATTAGGCTACTCCTCTCTTTGCATATCCCAGTCTaGTGCGTCTGTCCCAGGCCCTCACCTTCCACCACTACCTCTTCG | + |
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Preference number: 5 (lower is better) Translates to: LDLTIRLLLSLHIPV*CVCPRPSPSTTTSS Trigger: CGAAGAGGTAGTGGTGGAAGGTGAGGGCCTGGGACAGACGCAGCAGACTGGGATATGCAAAGAGAGGAGTAGCCTAATTGTCAAGTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647516.1 |
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| CDS TCA 90 bp | AAAGAAAAGTCCTTGGAAGGAACCAAGAGTATCAGCACCAAGGAATaGTGTCATGGTGTGAAGGTGGCTGGGAGTAGAAGTAGCGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: KEKSLEGTKSISTKE*CHGVKVAGSRSSGR Trigger: CCTCCCGCTACTTCTACTCCCAGCCACCTTCACACCATGACATCATTCCTTGGTGCTGATACTCTTGGTTCCTTCCAAGGACTTTTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414371.6 ENST00000623326.4 |
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| CDS GCA 90 bp | TTCATCACCCAGGTAGTAAGCCCAGTACCTAATAGTTATCTTTTCTaGTTCCCTCCTCACATCCTCCCCGCTCAAGTAGACCCTAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: FITQVVSPVPNSYLF*FPPHILPAQVDPSV Trigger: GACACTAGGGTCTACTTGAGCGGGGAGGATGTGAGGAGGGAAGCAGAAAAGATAACTATTAGGTACTGGGCTTACTACCTGGGTGATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000414371.6 ENST00000623326.4 |
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| CDS CCA 90 bp | TTTAATCTGTCACCGCCGCGAATCCTTCTCCATCTCTCTCAGCCCTaGCAACTCATGGTAAGCCTTTCCGGCCAAAACAAAAACTACAAT | + |
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Preference number: 5 (lower is better) Translates to: FNLSPPRILLHLSQP*QLMVSLSGQNKNYN Trigger: ATTGTAGTTTTTGTTTTGGCCGGAAAGGCTTACCATGAGTTGCCAGGGCTGAGAGAGATGGAGAAGGATTCGCGGCGGTGACAGATTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000370784.8 ENST00000370785.4 ENST00000475361.1 ENST00000482240.5 ENST00000623326.4 ENST00000644752.1 ENST00000646004.1 |
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| CDS TCA 90 bp | AAAGCTTATTTGCTTGACAACCATTTCCATTCAAGCGGCTGGAGGTaGAGGTCAGAGGTGACAAAGCAGCCAAGTCCATTGATCAAAGGG | + |
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Preference number: 5 (lower is better) Translates to: KAYLLDNHFHSSGWR*RSEVTKQPSPLIKG Trigger: CCCTTTGATCAATGGACTTGGCTGCTTTGTCACCTCTGACCTTCACCTCCAGCCGCTTGAATGGAAATGGTTGTCAAGCAAATAAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494709.1 |
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| CDS TCA 90 bp | GCAACACAGCAAGAACCTGTCATCTCATGCCAGTCAGAATGGCGATaGCTAAAAACTCAAGAAACAATAGATGCTGGCAAGGCTGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: ATQQEPVISCQSEWR*LKTQETIDAGKAVE Trigger: CTCCACAGCCTTGCCAGCATCTATTGTTTCTTGAGTTTTTAGTCATCGCCATTCTGACTGGCATGAGATGACAGGTTCTTGCTGTGTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645176.1 |
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| CDS GCA 90 bp | GGGCTAGATGTGCAGGGCATAAAGCAGGATCAGGAATGTATTACATaGTTGCAACTTTGTGGGCCATACACTAGATTTGGGGTTTGTGGT | + |
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Preference number: 5 (lower is better) Translates to: GLDVQGIKQDQECIT*LQLCGPYTRFGVCG Trigger: ACCACAAACCCCAAATCTAGTGTATGGCCCACAAAGTTGCAAGCATGTAATACATTCCTGATCCTGCTTTATGCCCTGCACATCTAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414371.6 ENST00000623326.4 |
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| CDS CCA 90 bp | TGGCGATTCCTCAAGGATCTATATCAAAGTATCTCATGTACCCCATaGCACCTGTTTGATTTGATGAAGGCGGCTGATGGAACCATGAAA | + |
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Preference number: 5 (lower is better) Translates to: WRFLKDLYQSISCTP*HLFDLMKAADGTMK Trigger: TTTCATGGTTCCATCAGCCGCCTTCATCAAATCAAACAGGTGCCATGGGGTACATGAGATACTTTGATATAGATCCTTGAGGAATCGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645176.1 |
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| CDS CCA 90 bp | TGTTGGTGGGAATGTAAATTAGTTCAACCACTGTGGAAGACGGTGTaGCGATTCCTCAAGGATCTATATCAAAGTATCTCATGTACCCCA | + |
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Preference number: 5 (lower is better) Translates to: CWWECKLVQPLWKTV*RFLKDLYQSISCTP Trigger: TGGGGTACATGAGATACTTTGATATAGATCCTTGAGGAATCGCCACACCGTCTTCCACAGTGGTTGAACTAATTTACATTCCCACCAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645176.1 |
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| CDS CCA 90 bp | ACGCTTTTACATTGTTGGTGGGAATGTAAATTAGTTCAACCACTGTaGAAGACGGTGTGGCGATTCCTCAAGGATCTATATCAAAGTATC | + |
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Preference number: 5 (lower is better) Translates to: TLLHCWWECKLVQPL*KTVWRFLKDLYQSI Trigger: GATACTTTGATATAGATCCTTGAGGAATCGCCACACCGTCTTCCACAGTGGTTGAACTAATTTACATTCCCACCAACAATGTAAAAGCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645176.1 |
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| CDS CCA 90 bp | ACAAGGAGGGTAAAGCTGGTCTCTGAATCCCTTCCTGATAGTCTATaGTACTGTGAATTACAACTATCAATTAGTATGATGCAACAAAAG | + |
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Preference number: 5 (lower is better) Translates to: TRRVKLVSESLPDSL*YCELQLSISMMQQK Trigger: CTTTTGTTGCATCATACTAATTGATAGTTGTAATTCACAGTACCATAGACTATCAGGAAGGGATTCAGAGACCAGCTTTACCCTCCTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000475361.1 ENST00000645288.1 ENST00000647516.1 |
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| CDS GCA 90 bp | TTCCTAAATGTTGTTCTGTTTGTCCTAATTCTTAACATGTCAGCTTaGAACACCTGTGAATTAAAACCAAGTCCATTGATCAAAGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: FLNVVLFVLILNMSA*NTCELKPSPLIKGA Trigger: TGCCCCTTTGATCAATGGACTTGGTTTTAATTCACAGGTGTTGCAAGCTGACATGTTAAGAATTAGGACAAACAGAACAACATTTAGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000370784.8 ENST00000370785.4 ENST00000414371.6 ENST00000463842.2 ENST00000470657.5 ENST00000623326.4 ENST00000642481.1 ENST00000643150.1 ENST00000644752.1 ENST00000645176.1 ENST00000645433.2 ENST00000646004.1 |
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| CDS GCA 72 bp | GGGCGGAGGGGCTCCTCACTTCTCAGACGGGGCGGTTaGCAGGCGGAGGGTCTCCTCACTTCTCAGACGGGG | + |
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Preference number: 6 (lower is better) Translates to: GRRGSSLLRRGG*QAEGLLTSQTG Trigger: CCCCGTCTGAGAAGTGAGGAGACCCTCCGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000460216.5 ENST00000642481.1 ENST00000644752.1 ENST00000645176.1 ENST00000645256.1 |
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| CDS CAA 72 bp | TGGGCGGAGGGGCTCCTCACTTCTCAGACGGGGCGGTaGCCAGGCGGAGGGTCTCCTCACTTCTCAGACGGG | + |
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Preference number: 6 (lower is better) Translates to: WAEGLLTSQTGR*PGGGSPHFSDG Trigger: CCCGTCTGAGAAGTGAGGAGACCCTCCGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000460216.5 ENST00000642481.1 ENST00000644752.1 ENST00000645176.1 ENST00000645256.1 |
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| CDS TCA 72 bp | GCTGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTaGGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: AARACNRRHSAG*GRRIRQGGCSE Trigger: CTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCGCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000642481.1 ENST00000644752.1 ENST00000645176.1 ENST00000645256.1 |
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| CDS CCA 72 bp | ATGGCGGCCGGGAAGAGGCGCTCCTCACTTCCTAGATaGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTC | + |
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Preference number: 6 (lower is better) Translates to: MAAGKRRSSLPR*DGGRAETLLTF Trigger: GAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCGGCCGCCAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000460216.5 ENST00000642481.1 ENST00000644752.1 ENST00000645176.1 ENST00000645256.1 |
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| CDS TCA 72 bp | AGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTaGGCCGAGATGGCAGCAGTACAGTCCAGCTTCCGC | + |
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Preference number: 6 (lower is better) Translates to: RLRQENQAGRLQ*AEMAAVQSSFR Trigger: GCGGAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000642481.1 ENST00000644752.1 ENST00000645176.1 ENST00000645256.1 |
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| CDS TCA 72 bp | GTTAGGCAGAACTGGCTCCGAACCGCCTATCTCCCATaGTCGGGGCCTCTAACGATGAGAAGATCCCCCACC | + |
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Preference number: 6 (lower is better) Translates to: VRQNWLRTAYLP*SGPLTMRRSPT Trigger: GGTGGGGGATCTTCTCATCGTTAGAGGCCCCGATCATGGGAGATAGGCGGTTCGGAGCCAGTTCTGCCTAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000370784.8 ENST00000370785.4 ENST00000470657.5 ENST00000475361.1 ENST00000642481.1 ENST00000643150.1 ENST00000644752.1 ENST00000645176.1 ENST00000646004.1 |
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| CDS GCA 72 bp | ACAATTAGGCTACTCCTCTCTTTGCATATCCCAGTCTaGTGCGTCTGTCCCAGGCCCTCACCCGACTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: TIRLLLSLHIPV*CVCPRPSPDCQ Trigger: CTGACAGTCGGGTGAGGGCCTGGGACAGACGCAGCAGACTGGGATATGCAAAGAGAGGAGTAGCCTAATTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414371.6 |
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| CDS GCA 72 bp | ACAATTAGGCTACTCCTCTCTTTGCATATCCCAGTCTaGTGCGTCTGTCCCAGGCCCTCACCTCTTCGTCCT | + |
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Preference number: 6 (lower is better) Translates to: TIRLLLSLHIPV*CVCPRPSPLRP Trigger: AGGACGAAGAGGTGAGGGCCTGGGACAGACGCAGCAGACTGGGATATGCAAAGAGAGGAGTAGCCTAATTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645288.1 |
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| CDS GCA 72 bp | ACAATTAGGCTACTCCTCTCTTTGCATATCCCAGTCTaGTGCGTCTGTCCCAGGCCCTCACCTTCCACCACT | + |
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Preference number: 6 (lower is better) Translates to: TIRLLLSLHIPV*CVCPRPSPSTT Trigger: AGTGGTGGAAGGTGAGGGCCTGGGACAGACGCAGCAGACTGGGATATGCAAAGAGAGGAGTAGCCTAATTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647516.1 |
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| CDS CCA 72 bp | TCACCGCCGCGAATCCTTCTCCATCTCTCTCAGCCCTaGCAACTCATGGTAAGCCTTTCCGGCCAAAACAAA | + |
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Preference number: 6 (lower is better) Translates to: SPPRILLHLSQP*QLMVSLSGQNK Trigger: TTTGTTTTGGCCGGAAAGGCTTACCATGAGTTGCCAGGGCTGAGAGAGATGGAGAAGGATTCGCGGCGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000370784.8 ENST00000370785.4 ENST00000475361.1 ENST00000482240.5 ENST00000623326.4 ENST00000644752.1 ENST00000646004.1 |
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| CDS CAA 72 bp | CAGCTTCCGCTCGGCATCAGAGGGAGACTGTTTGATTaGATGAAGGCGGCTGATGGAACCATGAAAGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: QLPLGIRGRLFD*MKAADGTMKGR Trigger: CCTCCCTTTCATGGTTCCATCAGCCGCCTTCATCAAATCAAACAGTCTCCCTCTGATGCCGAGCGGAAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642481.1 |
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| CDS CAA 90 bp | GACACAGTGAGACTCCGTCCAAGTCCATTGATCAAAGGGGCACTGTaGACTCTTCTCAGAATGTTGCCGTCTGCGGTAGTGGAACTCGGC | + |
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Preference number: 6 (lower is better) Translates to: DTVRLRPSPLIKGAL*TLLRMLPSAVVELG Trigger: GCCGAGTTCCACTACCGCAGACGGCAACATTCTGAGAAGAGTCAACAGTGCCCCTTTGATCAATGGACTTGGACGGAGTCTCACTGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000475361.1 ENST00000482240.5 ENST00000645288.1 ENST00000647516.1 |
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| CDS CAA 90 bp | AGTACAGTCCAGCTTCCGCTCGGCATCAGAGGGAGACTGTTTGATTaGATGAAGGCGGCTGATGGAACCATGAAAGGGAGGAGGTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: STVQLPLGIRGRLFD*MKAADGTMKGRRWQ Trigger: TTGCCACCTCCTCCCTTTCATGGTTCCATCAGCCGCCTTCATCAAATCAAACAGTCTCCCTCTGATGCCGAGCGGAAGCTGGACTGTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642481.1 |
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| CDS CAA 72 bp | TTGATCAAAGGGGCACTGTTGACTCTTCTCAGAATGTaGCCGTCTGCGGTAGTGGAACTCGGCAGCGACTTG | + |
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Preference number: 6 (lower is better) Translates to: LIKGALLTLLRM*PSAVVELGSDL Trigger: CAAGTCGCTGCCGAGTTCCACTACCGCAGACGGCAACATTCTGAGAAGAGTCAACAGTGCCCCTTTGATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000370784.8 ENST00000370785.4 ENST00000414371.6 ENST00000463842.2 ENST00000470657.5 ENST00000475361.1 ENST00000482240.5 ENST00000494709.1 ENST00000623326.4 ENST00000642481.1 ENST00000643150.1 ENST00000644752.1 ENST00000645176.1 ENST00000645288.1 ENST00000645433.2 ENST00000646004.1 ENST00000647516.1 |
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| CDS CAA 90 bp | TCAGAGGTGACAAAGCAGCCAAGTCCATTGATCAAAGGGGCACTGTaGACTCTTCTCAGAATGTTGCCGTCTGCGGTAGTGGAACTCGGC | + |
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Preference number: 6 (lower is better) Translates to: SEVTKQPSPLIKGAL*TLLRMLPSAVVELG Trigger: GCCGAGTTCCACTACCGCAGACGGCAACATTCTGAGAAGAGTCAACAGTGCCCCTTTGATCAATGGACTTGGCTGCTTTGTCACCTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494709.1 |
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| CDS CAA 90 bp | CCAAGTCCATTGATCAAAGGGGCACTGTTGACTCTTCTCAGAATGTaGCCGTCTGCGGTAGTGGAACTCGGCAGCGACTTGAAACCTAGT | + |
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Preference number: 6 (lower is better) Translates to: PSPLIKGALLTLLRM*PSAVVELGSDLKPS Trigger: ACTAGGTTTCAAGTCGCTGCCGAGTTCCACTACCGCAGACGGCAACATTCTGAGAAGAGTCAACAGTGCCCCTTTGATCAATGGACTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000370784.8 ENST00000370785.4 ENST00000414371.6 ENST00000463842.2 ENST00000470657.5 ENST00000475361.1 ENST00000482240.5 ENST00000494709.1 ENST00000623326.4 ENST00000642481.1 ENST00000643150.1 ENST00000644752.1 ENST00000645176.1 ENST00000645288.1 ENST00000645433.2 ENST00000646004.1 ENST00000647516.1 |
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| CDS CAA 90 bp | CTGCTTTTGTTAGATCTAGACTTGACAATTAGGCTACTCCTCTCTTaGCATATCCCAGTCTGCTGCGTCTGTCCCAGGCCCTCACCCGAC | + |
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Preference number: 6 (lower is better) Translates to: LLLLDLDLTIRLLLS*HIPVCCVCPRPSPD Trigger: GTCGGGTGAGGGCCTGGGACAGACGCAGCAGACTGGGATATGCAAAGAGAGGAGTAGCCTAATTGTCAAGTCTAGATCTAACAAAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414371.6 |
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| CDS CAA 72 bp | AGACTCCGTCCAAGTCCATTGATCAAAGGGGCACTGTaGACTCTTCTCAGAATGTTGCCGTCTGCGGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: RLRPSPLIKGAL*TLLRMLPSAVV Trigger: CACTACCGCAGACGGCAACATTCTGAGAAGAGTCAACAGTGCCCCTTTGATCAATGGACTTGGACGGAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000475361.1 ENST00000482240.5 ENST00000645288.1 ENST00000647516.1 |
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| CDS CAA 90 bp | CTGCTTTTGTTAGATCTAGACTTGACAATTAGGCTACTCCTCTCTTaGCATATCCCAGTCTGCTGCGTCTGTCCCAGGCCCTCACCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LLLLDLDLTIRLLLS*HIPVCCVCPRPSPS Trigger: GGAAGGTGAGGGCCTGGGACAGACGCAGCAGACTGGGATATGCAAAGAGAGGAGTAGCCTAATTGTCAAGTCTAGATCTAACAAAAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647516.1 |
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| CDS CAA 72 bp | TTAGATCTAGACTTGACAATTAGGCTACTCCTCTCTTaGCATATCCCAGTCTGCTGCGTCTGTCCCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LDLDLTIRLLLS*HIPVCCVCPRP Trigger: GGGCCTGGGACAGACGCAGCAGACTGGGATATGCAAAGAGAGGAGTAGCCTAATTGTCAAGTCTAGATCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000414371.6 ENST00000645288.1 ENST00000647516.1 |
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| CDS CAA 72 bp | ACAAAGCAGCCAAGTCCATTGATCAAAGGGGCACTGTaGACTCTTCTCAGAATGTTGCCGTCTGCGGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: TKQPSPLIKGAL*TLLRMLPSAVV Trigger: CACTACCGCAGACGGCAACATTCTGAGAAGAGTCAACAGTGCCCCTTTGATCAATGGACTTGGCTGCTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494709.1 |
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| CDS CAA 90 bp | CTGCTTTTGTTAGATCTAGACTTGACAATTAGGCTACTCCTCTCTTaGCATATCCCAGTCTGCTGCGTCTGTCCCAGGCCCTCACCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LLLLDLDLTIRLLLS*HIPVCCVCPRPSPL Trigger: AAGAGGTGAGGGCCTGGGACAGACGCAGCAGACTGGGATATGCAAAGAGAGGAGTAGCCTAATTGTCAAGTCTAGATCTAACAAAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645288.1 |
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| CDS GCA 72 bp | CAGGTAGTAAGCCCAGTACCTAATAGTTATCTTTTCTaGTTCCCTCCTCACATCCTCCCCGCTCAAGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: QVVSPVPNSYLF*FPPHILPAQVD Trigger: GTCTACTTGAGCGGGGAGGATGTGAGGAGGGAAGCAGAAAAGATAACTATTAGGTACTGGGCTTACTACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000414371.6 ENST00000623326.4 |
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| CDS CAA 72 bp | CAAAGTATCTCATGTACCCCATGGCACCTGTTTGATTaGATGAAGGCGGCTGATGGAACCATGAAAGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: QSISCTPWHLFD*MKAADGTMKGR Trigger: CCTCCCTTTCATGGTTCCATCAGCCGCCTTCATCAAATCAAACAGGTGCCATGGGGTACATGAGATACTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645176.1 |
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| CDS CAA 90 bp | AACACCTGTGAATTAAAACCAAGTCCATTGATCAAAGGGGCACTGTaGACTCTTCTCAGAATGTTGCCGTCTGCGGTAGTGGAACTCGGC | + |
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Preference number: 6 (lower is better) Translates to: NTCELKPSPLIKGAL*TLLRMLPSAVVELG Trigger: GCCGAGTTCCACTACCGCAGACGGCAACATTCTGAGAAGAGTCAACAGTGCCCCTTTGATCAATGGACTTGGTTTTAATTCACAGGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000370784.8 ENST00000370785.4 ENST00000414371.6 ENST00000463842.2 ENST00000470657.5 ENST00000623326.4 ENST00000642481.1 ENST00000643150.1 ENST00000644752.1 ENST00000645176.1 ENST00000645433.2 ENST00000646004.1 |
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| CDS CAA 90 bp | GATCTATATCAAAGTATCTCATGTACCCCATGGCACCTGTTTGATTaGATGAAGGCGGCTGATGGAACCATGAAAGGGAGGAGGTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: DLYQSISCTPWHLFD*MKAADGTMKGRRWQ Trigger: TTGCCACCTCCTCCCTTTCATGGTTCCATCAGCCGCCTTCATCAAATCAAACAGGTGCCATGGGGTACATGAGATACTTTGATATAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645176.1 |
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| CDS CAA 90 bp | GCCATTCAAATCCATGTTGTTCAAGTTTGGAGGTTCCTGTTTGATTaGATGAAGGCGGCTGATGGAACCATGAAAGGGAGGAGGTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: AIQIHVVQVWRFLFD*MKAADGTMKGRRWQ Trigger: TTGCCACCTCCTCCCTTTCATGGTTCCATCAGCCGCCTTCATCAAATCAAACAGGAACCTCCAAACTTGAACAACATGGATTTGAATGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644752.1 |
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| CDS CAA 90 bp | CTAGATGTGCAGGGCATAAAGCAGGATCAGGAATGTATTACATGCTaGCAACTTTGTGGGCCATACACTAGATTTGGGGTTTGTGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: LDVQGIKQDQECITC*QLCGPYTRFGVCGC Trigger: GCAACCACAAACCCCAAATCTAGTGTATGGCCCACAAAGTTGCAAGCATGTAATACATTCCTGATCCTGCTTTATGCCCTGCACATCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414371.6 ENST00000623326.4 |
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| CDS GCA 72 bp | GTGCAGGGCATAAAGCAGGATCAGGAATGTATTACATaGTTGCAACTTTGTGGGCCATACACTAGATTTGGG | + |
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Preference number: 6 (lower is better) Translates to: VQGIKQDQECIT*LQLCGPYTRFG Trigger: CCCAAATCTAGTGTATGGCCCACAAAGTTGCAAGCATGTAATACATTCCTGATCCTGCTTTATGCCCTGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414371.6 ENST00000623326.4 |
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| CDS CAA 72 bp | GAATTAAAACCAAGTCCATTGATCAAAGGGGCACTGTaGACTCTTCTCAGAATGTTGCCGTCTGCGGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: ELKPSPLIKGAL*TLLRMLPSAVV Trigger: CACTACCGCAGACGGCAACATTCTGAGAAGAGTCAACAGTGCCCCTTTGATCAATGGACTTGGTTTTAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000370784.8 ENST00000370785.4 ENST00000414371.6 ENST00000463842.2 ENST00000470657.5 ENST00000623326.4 ENST00000642481.1 ENST00000643150.1 ENST00000644752.1 ENST00000645176.1 ENST00000645433.2 ENST00000646004.1 |
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| CDS TCA 72 bp | TGTCTACTAGAACAAATGAGAACCAGTATCAGAAGGTaGCACAGGAGAGTTTGTGACAGTGCCGATTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: CLLEQMRTSIRR*HRRVCDSADFS Trigger: GCTGAAATCGGCACTGTCACAAACTCTCCTGTGTCACCTTCTGATACTGGTTCTCATTTGTTCTAGTAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000370784.8 ENST00000370785.4 ENST00000463842.2 ENST00000642481.1 ENST00000643150.1 ENST00000644752.1 ENST00000645176.1 ENST00000645256.1 ENST00000645433.2 ENST00000646004.1 |
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| CDS CCA 72 bp | CTCAAGGATCTATATCAAAGTATCTCATGTACCCCATaGCACCTGTTTGATTTGATGAAGGCGGCTGATGGA | + |
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Preference number: 6 (lower is better) Translates to: LKDLYQSISCTP*HLFDLMKAADG Trigger: TCCATCAGCCGCCTTCATCAAATCAAACAGGTGCCATGGGGTACATGAGATACTTTGATATAGATCCTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645176.1 |
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| CDS CAA 72 bp | CAGGGCATAAAGCAGGATCAGGAATGTATTACATGCTaGCAACTTTGTGGGCCATACACTAGATTTGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: QGIKQDQECITC*QLCGPYTRFGV Trigger: AACCCCAAATCTAGTGTATGGCCCACAAAGTTGCAAGCATGTAATACATTCCTGATCCTGCTTTATGCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414371.6 ENST00000623326.4 |
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| CDS CAA 90 bp | CCTTCCAGTTCCAGGGAAATATGCCATGATCTTGGGACACTGCTTTaGTTAGATCTAGACTTGACAATTAGGCTACTCCTCTCTTTGCAT | + |
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Preference number: 6 (lower is better) Translates to: PSSSREICHDLGTLL*LDLDLTIRLLLSLH Trigger: ATGCAAAGAGAGGAGTAGCCTAATTGTCAAGTCTAGATCTAACAAAAGCAGTGTCCCAAGATCATGGCATATTTCCCTGGAACTGGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000414371.6 ENST00000463842.2 ENST00000645288.1 ENST00000647516.1 |
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| CDS TCA 72 bp | CTTGATCAGTCCTTCCAGTTCCAGGGAAATATGCCATaGTCTTGGGACACTGCTTTTGTTAGATCTAGACTT | + |
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Preference number: 6 (lower is better) Translates to: LDQSFQFQGNMP*SWDTAFVRSRL Trigger: AAGTCTAGATCTAACAAAAGCAGTGTCCCAAGATCATGGCATATTTCCCTGGAACTGGAAGGACTGATCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000414371.6 ENST00000463842.2 ENST00000645288.1 ENST00000647516.1 |
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| CDS CCA 72 bp | CATTGTTGGTGGGAATGTAAATTAGTTCAACCACTGTaGAAGACGGTGTGGCGATTCCTCAAGGATCTATAT | + |
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Preference number: 6 (lower is better) Translates to: HCWWECKLVQPL*KTVWRFLKDLY Trigger: ATATAGATCCTTGAGGAATCGCCACACCGTCTTCCACAGTGGTTGAACTAATTTACATTCCCACCAACAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645176.1 |
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| CDS CAA 72 bp | TCCAGGGAAATATGCCATGATCTTGGGACACTGCTTTaGTTAGATCTAGACTTGACAATTAGGCTACTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SREICHDLGTLL*LDLDLTIRLLL Trigger: GAGGAGTAGCCTAATTGTCAAGTCTAGATCTAACAAAAGCAGTGTCCCAAGATCATGGCATATTTCCCTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000414371.6 ENST00000463842.2 ENST00000645288.1 ENST00000647516.1 |
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| CDS GCA 72 bp | TGTTTCTTGATCAGTCCTTCCAGTTCCAGGGAAATATaGCATGATCTTGGGACACTGCTTTTGTTAGATCTA | + |
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Preference number: 6 (lower is better) Translates to: CFLISPSSSREI*HDLGTLLLLDL Trigger: TAGATCTAACAAAAGCAGTGTCCCAAGATCATGGCATATTTCCCTGGAACTGGAAGGACTGATCAAGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000414371.6 ENST00000463842.2 ENST00000645288.1 ENST00000647516.1 |
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| CDS GCA 72 bp | GTTGATATTGAAATGCCATTTCACATGATGTATTGTTaGATAGGACTGGGAATAGGACTTGAAGGCGAACCA | + |
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Preference number: 6 (lower is better) Translates to: VDIEMPFHMMYC*IGLGIGLEGEP Trigger: TGGTTCGCCTTCAAGTCCTATTCCCAGTCCTATGCAACAATACATCATGTGAAATGGCATTTCAATATCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463842.2 |
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| CDS GCA 72 bp | AGAATGGCGATGACTAAAAACTCAAGAAACAATAGATaGTGGCAAGGCTGTGGAGAAATAGGAACGCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: RMAMTKNSRNNR*WQGCGEIGTLL Trigger: TAAAAGCGTTCCTATTTCTCCACAGCCTTGCCAGCATCTATTGTTTCTTGAGTTTTTAGTCATCGCCATTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645176.1 |
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| CDS CCA 72 bp | TGTGTGTGTTTCTCCACTGGTGAGAAAGTCTTGGGATaGGTGAATCATTTAGTTGAAAGTTTGTCTACTAGA | + |
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Preference number: 6 (lower is better) Translates to: CVCFSTGEKVLG*VNHLVESLSTR Trigger: TCTAGTAGACAAACTTTCAACTAAATGATTCACCCATCCCAAGACTTTCTCACCAGTGGAGAAACACACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000370784.8 ENST00000370785.4 ENST00000463842.2 ENST00000642481.1 ENST00000643150.1 ENST00000644752.1 ENST00000645176.1 ENST00000645256.1 ENST00000645433.2 ENST00000646004.1 |
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| CDS CCA 72 bp | GAATGTAAATTAGTTCAACCACTGTGGAAGACGGTGTaGCGATTCCTCAAGGATCTATATCAAAGTATCTCA | + |
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Preference number: 6 (lower is better) Translates to: ECKLVQPLWKTV*RFLKDLYQSIS Trigger: TGAGATACTTTGATATAGATCCTTGAGGAATCGCCACACCGTCTTCCACAGTGGTTGAACTAATTTACATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645176.1 |
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| CDS GCA 72 bp | GTTGTTCTGTTTGTCCTAATTCTTAACATGTCAGCTTaGAACACCTGTGAATTAAAACCAAGTCCATTGATC | + |
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Preference number: 6 (lower is better) Translates to: VVLFVLILNMSA*NTCELKPSPLI Trigger: GATCAATGGACTTGGTTTTAATTCACAGGTGTTGCAAGCTGACATGTTAAGAATTAGGACAAACAGAACAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000370784.8 ENST00000370785.4 ENST00000414371.6 ENST00000463842.2 ENST00000470657.5 ENST00000623326.4 ENST00000642481.1 ENST00000643150.1 ENST00000644752.1 ENST00000645176.1 ENST00000645433.2 ENST00000646004.1 |
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| CDS TCA 72 bp | TCATTTTGTGAACAATATATTCTCTCCTACCTCAAATaGCCCAAAAGCTGCATTCATTTAGAGTTAATCAGC | + |
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Preference number: 6 (lower is better) Translates to: SFCEQYILSYLK*PKSCIHLELIS Trigger: GCTGATTAACTCTAAATGAATGCAGCTTTTGGGTCATTTGAGGTAGGAGAGAATATATTGTTCACAAAATGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000475361.1 ENST00000645288.1 ENST00000647516.1 |
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