Pregenerated sensors for PABIR1 (Homo sapiens)
Ensembl gene IDs: ENSG00000187866Ensembl transcript IDs: ENST00000394264.7
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGGGGAGGCCGGCAGCAGCAGGCCGTGGCGGCTCGGGAACGTTGTaGTGTTCCGCCTGGCGCTCGGCGCCTCGGCCTGGAACACCGGCG | + |
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Preference number: 5 (lower is better) Translates to: QGRPAAAGRGGSGTL*CSAWRSAPRPGTPA Trigger: CGCCGGTGTTCCAGGCCGAGGCGCCGAGCGCCAGGCGGAACAGCACAACGTTCCCGAGCCGCCACGGCCTGCTGCTGCCGGCCTCCCCTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CCA 90 bp | CGGCTGCTGTGCATGCGGACAGGGGAGGCCGGCAGCAGCAGGCCGTaGCGGCTCGGGAACGTTGTGCTGTTCCGCCTGGCGCTCGGCGCC | + |
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Preference number: 5 (lower is better) Translates to: RLLCMRTGEAGSSRP*RLGNVVLFRLALGA Trigger: GGCGCCGAGCGCCAGGCGGAACAGCACAACGTTCCCGAGCCGCCACGGCCTGCTGCTGCCGGCCTCCCCTGTCCGCATGCACAGCAGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS GCA 90 bp | AAGTCCATGCCCTCTTCTTGTTTGATCTGGTGCAAGCGGCTGCTGTaGATGCGGACAGGGGAGGCCGGCAGCAGCAGGCCGTGGCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: KSMPSSCLIWCKRLL*MRTGEAGSSRPWRL Trigger: GAGCCGCCACGGCCTGCTGCTGCCGGCCTCCCCTGTCCGCATGCACAGCAGCCGCTTGCACCAGATCAAACAAGAAGAGGGCATGGACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS GCA 90 bp | GTCTCTCGGTTGATCAAGTCCATGCCCTCTTCTTGTTTGATCTGGTaGAAGCGGCTGCTGTGCATGCGGACAGGGGAGGCCGGCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: VSRLIKSMPSSCLIW*KRLLCMRTGEAGSS Trigger: GCTGCTGCCGGCCTCCCCTGTCCGCATGCACAGCAGCCGCTTGCACCAGATCAAACAAGAAGAGGGCATGGACTTGATCAACCGAGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CCA 90 bp | ACCGTCTCTCGGTTGATCAAGTCCATGCCCTCTTCTTGTTTGATCTaGTGCAAGCGGCTGCTGTGCATGCGGACAGGGGAGGCCGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TVSRLIKSMPSSCLI*CKRLLCMRTGEAGS Trigger: GCTGCCGGCCTCCCCTGTCCGCATGCACAGCAGCCGCTTGCACCAGATCAAACAAGAAGAGGGCATGGACTTGATCAACCGAGAGACGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS TCA 90 bp | GCTTCCCAATTCCCCGAGTGGGTGACGGTGCTGGTGACACAGGAATaGAATCGATGCGCTTGGGGGAGGCGGATTTCTCCACGTCGTTGT | + |
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Preference number: 5 (lower is better) Translates to: ASQFPEWVTVLVTQE*NRCAWGRRISPRRC Trigger: ACAACGACGTGGAGAAATCCGCCTCCCCCAAGCGCATCGATTTCATTCCTGTGTCACCAGCACCGTCACCCACTCGGGGAATTGGGAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS GCA 90 bp | TCGTTGTCACTCAGGCTGAAACTTTCCTCCCAGGAGTGGCTTATCTaGATTGCGGTCTGCACCTCCCGTTCGTGGACCGTCTCTCGGTTG | + |
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Preference number: 5 (lower is better) Translates to: SLSLRLKLSSQEWLI*IAVCTSRSWTVSRL Trigger: CAACCGAGAGACGGTCCACGAACGGGAGGTGCAGACCGCAATGCAGATAAGCCACTCCTGGGAGGAAAGTTTCAGCCTGAGTGACAACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CCA 90 bp | GCAATTGATGGGGCTCTGGCTTCTCCGGGTGGTAAATCGGGTCGTTaGGCTGGGAATAGGGCTTGGAGGCAATCCGTTGCTACTTACAAA | + |
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Preference number: 5 (lower is better) Translates to: AIDGALASPGGKSGR*AGNRAWRQSVATYK Trigger: TTTGTAAGTAGCAACGGATTGCCTCCAAGCCCTATTCCCAGCCCAACGACCCGATTTACCACCCGGAGAAGCCAGAGCCCCATCAATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CCA 90 bp | GAGAATGAATGGATAGCCGACCAGAGTGAGTGTGAGGAGCACAAGTaGGAGTTAGGAAGTTGCTTCAGAAGCCTAAGAGGGAAATGCTGG | + |
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Preference number: 5 (lower is better) Translates to: ENEWIADQSECEEHK*ELGSCFRSLRGKCW Trigger: CCAGCATTTCCCTCTTAGGCTTCTGAAGCAACTTCCTAACTCCCACTTGTGCTCCTCACACTCACTCTGGTCGGCTATCCATTCATTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS TCA 90 bp | AACCTGTGGACACAGTCTTACCCTCGATGCAATTTCACTCCATCTTaGGGCAACTGTCAAGAGTTGACCAGTTCCATTTACTCTCATAGT | + |
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Preference number: 5 (lower is better) Translates to: NLWTQSYPRCNFTPS*GNCQELTSSIYSHS Trigger: ACTATGAGAGTAAATGGAACTGGTCAACTCTTGACAGTTGCCTCAAGATGGAGTGAAATTGCATCGAGGGTAAGACTGTGTCCACAGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS TCA 90 bp | ACCCTCGATGCAATTTCACTCCATCTTGAGGCAACTGTCAAGAGTTaGCCAGTTCCATTTACTCTCATAGTTGTAAAAATTCCACAAAAT | + |
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Preference number: 5 (lower is better) Translates to: TLDAISLHLEATVKS*PVPFTLIVVKIPQN Trigger: ATTTTGTGGAATTTTTACAACTATGAGAGTAAATGGAACTGGTCAACTCTTGACAGTTGCCTCAAGATGGAGTGAAATTGCATCGAGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS TCA 90 bp | AATGATCATCATCTTCTTGGTTCAATTGTCTGGCAACCATTCCCCTaGCTCCCACCTCTGTTAGATCTTCAAAATTGTTCTACTAATCTA | + |
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Preference number: 5 (lower is better) Translates to: NDHHLLGSIVWQPFP*LPPLLDLQNCSTNL Trigger: TAGATTAGTAGAACAATTTTGAAGATCTAACAGAGGTGGGAGTCAGGGGAATGGTTGCCAGACAATTGAACCAAGAAGATGATGATCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS TCA 90 bp | TTCTCAGAGGCAACATTAAACCTTTACTGCACTCAAGCTTCCAAATaGTCTCCTGTCCCTATCCTCATGTATCTTAGATTCCTCAATAAT | + |
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Preference number: 5 (lower is better) Translates to: FSEATLNLYCTQASK*SPVPILMYLRFLNN Trigger: ATTATTGAGGAATCTAAGATACATGAGGATAGGGACAGGAGATCATTTGGAAGCTTGAGTGCAGTAAAGGTTTAATGTTGCCTCTGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS TCA 90 bp | TATTTAAGTTTGAATTTCAACAACAGGGTCGAGAATGGGAGCACATaGACACTATTACTCAGAAGAGAGAATTTTAAACCTGTGGACACA | + |
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Preference number: 5 (lower is better) Translates to: YLSLNFNNRVENGST*TLLLRRENFKPVDT Trigger: TGTGTCCACAGGTTTAAAATTCTCTCTTCTGAGTAATAGTGTTCATGTGCTCCCATTCTCGACCCTGTTGTTGAAATTCAAACTTAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS TCA 90 bp | TTATTGCCAAATAAACTGGTCTCTTGCTACAGGTATGTAACTGGTTaGACTAATAAATGTGAATCACTGGAAGGCAATCTGATACAAGTT | + |
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Preference number: 5 (lower is better) Translates to: LLPNKLVSCYRYVTG*TNKCESLEGNLIQV Trigger: AACTTGTATCAGATTGCCTTCCAGTGATTCACATTTATTAGTTCAACCAGTTACATACCTGTAGCAAGAGACCAGTTTATTTGGCAATAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS GCA 72 bp | CCGGCAGCAGCAGGCCGTGGCGGCTCGGGAACGTTGTaGTGTTCCGCCTGGCGCTCGGCGCCTCGGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: PAAAGRGGSGTL*CSAWRSAPRPG Trigger: TCCAGGCCGAGGCGCCGAGCGCCAGGCGGAACAGCACAACGTTCCCGAGCCGCCACGGCCTGCTGCTGCCGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 72 bp | AGGCCGGCAGCAGCAGGCCGTGGCGGCTCGGGAACGTaGTGCTGTTCCGCCTGGCGCTCGGCGCCTCGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RPAAAGRGGSGT*CCSAWRSAPRP Trigger: AGGCCGAGGCGCCGAGCGCCAGGCGGAACAGCACAACGTTCCCGAGCCGCCACGGCCTGCTGCTGCCGGCCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 90 bp | GGACAGGGGAGGCCGGCAGCAGCAGGCCGTGGCGGCTCGGGAACGTaGTGCTGTTCCGCCTGGCGCTCGGCGCCTCGGCCTGGAACACCG | + |
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Preference number: 6 (lower is better) Translates to: GQGRPAAAGRGGSGT*CCSAWRSAPRPGTP Trigger: CGGTGTTCCAGGCCGAGGCGCCGAGCGCCAGGCGGAACAGCACAACGTTCCCGAGCCGCCACGGCCTGCTGCTGCCGGCCTCCCCTGTCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CCA 72 bp | GGCCGTGGCGGCTCGGGAACGTTGTGCTGTTCCGCCTaGCGCTCGGCGCCTCGGCCTGGAACACCGGCGAAG | + |
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Preference number: 6 (lower is better) Translates to: GRGGSGTLCCSA*RSAPRPGTPAK Trigger: CTTCGCCGGTGTTCCAGGCCGAGGCGCCGAGCGCCAGGCGGAACAGCACAACGTTCCCGAGCCGCCACGGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CCA 72 bp | TGCATGCGGACAGGGGAGGCCGGCAGCAGCAGGCCGTaGCGGCTCGGGAACGTTGTGCTGTTCCGCCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: CMRTGEAGSSRP*RLGNVVLFRLA Trigger: CGCCAGGCGGAACAGCACAACGTTCCCGAGCCGCCACGGCCTGCTGCTGCCGGCCTCCCCTGTCCGCATGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CCA 72 bp | GTTGTGCTGTTCCGCCTGGCGCTCGGCGCCTCGGCCTaGAACACCGGCGAAGTGTCACTGAGGCCGTGGATC | + |
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Preference number: 6 (lower is better) Translates to: VVLFRLALGASA*NTGEVSLRPWI Trigger: GATCCACGGCCTCAGTGACACTTCGCCGGTGTTCCAGGCCGAGGCGCCGAGCGCCAGGCGGAACAGCACAAC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CCA 72 bp | GGGGCTCTGGCTTCTCCGGGTGGTAAATCGGGTCGTTaGGCTGGGAATAGGGCTTGGAGGCAATCCGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: GALASPGGKSGR*AGNRAWRQSVA Trigger: AGCAACGGATTGCCTCCAAGCCCTATTCCCAGCCCAACGACCCGATTTACCACCCGGAGAAGCCAGAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 90 bp | TCGTGGACCGTCTCTCGGTTGATCAAGTCCATGCCCTCTTCTTGTTaGATCTGGTGCAAGCGGCTGCTGTGCATGCGGACAGGGGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SWTVSRLIKSMPSSC*IWCKRLLCMRTGEA Trigger: GGCCTCCCCTGTCCGCATGCACAGCAGCCGCTTGCACCAGATCAAACAAGAAGAGGGCATGGACTTGATCAACCGAGAGACGGTCCACGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 90 bp | CCGTTCGTGGACCGTCTCTCGGTTGATCAAGTCCATGCCCTCTTCTaGTTTGATCTGGTGCAAGCGGCTGCTGTGCATGCGGACAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: PFVDRLSVDQVHALF*FDLVQAAAVHADRG Trigger: TCCCCTGTCCGCATGCACAGCAGCCGCTTGCACCAGATCAAACAAGAAGAGGGCATGGACTTGATCAACCGAGAGACGGTCCACGAACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS TCA 72 bp | TTCCCCGAGTGGGTGACGGTGCTGGTGACACAGGAATaGAATCGATGCGCTTGGGGGAGGCGGATTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: FPEWVTVLVTQE*NRCAWGRRISP Trigger: TGGAGAAATCCGCCTCCCCCAAGCGCATCGATTTCATTCCTGTGTCACCAGCACCGTCACCCACTCGGGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS GCA 72 bp | CTCAGGCTGAAACTTTCCTCCCAGGAGTGGCTTATCTaGATTGCGGTCTGCACCTCCCGTTCGTGGACCGTC | + |
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Preference number: 6 (lower is better) Translates to: LRLKLSSQEWLI*IAVCTSRSWTV Trigger: GACGGTCCACGAACGGGAGGTGCAGACCGCAATGCAGATAAGCCACTCCTGGGAGGAAAGTTTCAGCCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 72 bp | TCGATGCGCTTGGGGGAGGCGGATTTCTCCACGTCGTaGTCACTCAGGCTGAAACTTTCCTCCCAGGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: SMRLGEADFSTS*SLRLKLSSQEW Trigger: CCACTCCTGGGAGGAAAGTTTCAGCCTGAGTGACAACGACGTGGAGAAATCCGCCTCCCCCAAGCGCATCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 90 bp | CGAGTGGGTGACGGTGCTGGTGACACAGGAATGAAATCGATGCGCTaGGGGGAGGCGGATTTCTCCACGTCGTTGTCACTCAGGCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: RVGDGAGDTGMKSMR*GEADFSTSLSLRLK Trigger: TTTCAGCCTGAGTGACAACGACGTGGAGAAATCCGCCTCCCCCAAGCGCATCGATTTCATTCCTGTGTCACCAGCACCGTCACCCACTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS GCA 72 bp | TTGATCAAGTCCATGCCCTCTTCTTGTTTGATCTGGTaGAAGCGGCTGCTGTGCATGCGGACAGGGGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LIKSMPSSCLIW*KRLLCMRTGEA Trigger: GGCCTCCCCTGTCCGCATGCACAGCAGCCGCTTGCACCAGATCAAACAAGAAGAGGGCATGGACTTGATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CCA 72 bp | CGGTTGATCAAGTCCATGCCCTCTTCTTGTTTGATCTaGTGCAAGCGGCTGCTGTGCATGCGGACAGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: RLIKSMPSSCLI*CKRLLCMRTGE Trigger: CTCCCCTGTCCGCATGCACAGCAGCCGCTTGCACCAGATCAAACAAGAAGAGGGCATGGACTTGATCAACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 72 bp | GCGGTCTGCACCTCCCGTTCGTGGACCGTCTCTCGGTaGATCAAGTCCATGCCCTCTTCTTGTTTGATCTGG | + |
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Preference number: 6 (lower is better) Translates to: AVCTSRSWTVSR*IKSMPSSCLIW Trigger: CCAGATCAAACAAGAAGAGGGCATGGACTTGATCAACCGAGAGACGGTCCACGAACGGGAGGTGCAGACCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 72 bp | GACGGTGCTGGTGACACAGGAATGAAATCGATGCGCTaGGGGGAGGCGGATTTCTCCACGTCGTTGTCACTC | + |
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Preference number: 6 (lower is better) Translates to: DGAGDTGMKSMR*GEADFSTSLSL Trigger: GAGTGACAACGACGTGGAGAAATCCGCCTCCCCCAAGCGCATCGATTTCATTCCTGTGTCACCAGCACCGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 90 bp | ATCTGCATTGCGGTCTGCACCTCCCGTTCGTGGACCGTCTCTCGGTaGATCAAGTCCATGCCCTCTTCTTGTTTGATCTGGTGCAAGCGG | + |
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Preference number: 6 (lower is better) Translates to: ICIAVCTSRSWTVSR*IKSMPSSCLIWCKR Trigger: CCGCTTGCACCAGATCAAACAAGAAGAGGGCATGGACTTGATCAACCGAGAGACGGTCCACGAACGGGAGGTGCAGACCGCAATGCAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 72 bp | GACCGTCTCTCGGTTGATCAAGTCCATGCCCTCTTCTaGTTTGATCTGGTGCAAGCGGCTGCTGTGCATGCG | + |
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Preference number: 6 (lower is better) Translates to: DRLSVDQVHALF*FDLVQAAAVHA Trigger: CGCATGCACAGCAGCCGCTTGCACCAGATCAAACAAGAAGAGGGCATGGACTTGATCAACCGAGAGACGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 72 bp | GTCTCTCGGTTGATCAAGTCCATGCCCTCTTCTTGTTaGATCTGGTGCAAGCGGCTGCTGTGCATGCGGACA | + |
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Preference number: 6 (lower is better) Translates to: VSRLIKSMPSSC*IWCKRLLCMRT Trigger: TGTCCGCATGCACAGCAGCCGCTTGCACCAGATCAAACAAGAAGAGGGCATGGACTTGATCAACCGAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CCA 72 bp | TGGATAGCCGACCAGAGTGAGTGTGAGGAGCACAAGTaGGAGTTAGGAAGTTGCTTCAGAAGCCTAAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: WIADQSECEEHK*ELGSCFRSLRG Trigger: CCCTCTTAGGCTTCTGAAGCAACTTCCTAACTCCCACTTGTGCTCCTCACACTCACTCTGGTCGGCTATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 90 bp | CACAGTCCTGTTGTTGCTGTCAGAAACCCAAGTTACACTGTACCTTaGTCTAATCAATGGTGCCCTAGTTTGGTGGGAGATGGAGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: HSPVVAVRNPSYTVP*SNQWCPSLVGDGEE Trigger: TTCCTCTCCATCTCCCACCAAACTAGGGCACCATTGATTAGACAAAGGTACAGTGTAACTTGGGTTTCTGACAGCAACAACAGGACTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 72 bp | AGGGCTTGGAGGCAATCCGTTGCTACTTACAAAACTTaGCAAGGATGGCGAAAAACACTGCTTCCCAATTCC | + |
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Preference number: 6 (lower is better) Translates to: RAWRQSVATYKT*QGWRKTLLPNS Trigger: GGAATTGGGAAGCAGTGTTTTTCGCCATCCTTGCAAAGTTTTGTAAGTAGCAACGGATTGCCTCCAAGCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CCA 72 bp | TTGCTTCAGAAGCCTAAGAGGGAAATGCTGGTAGCCTaGATCAGAGTGGCAATAGAGGTAGAAATAAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: LLQKPKREMLVA*IRVAIEVEIRR Trigger: TCTCCTTATTTCTACCTCTATTGCCACTCTGATCCAGGCTACCAGCATTTCCCTCTTAGGCTTCTGAAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS TCA 72 bp | ACACAGTCTTACCCTCGATGCAATTTCACTCCATCTTaGGGCAACTGTCAAGAGTTGACCAGTTCCATTTAC | + |
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Preference number: 6 (lower is better) Translates to: TQSYPRCNFTPS*GNCQELTSSIY Trigger: GTAAATGGAACTGGTCAACTCTTGACAGTTGCCTCAAGATGGAGTGAAATTGCATCGAGGGTAAGACTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CCA 72 bp | ATTCCTGTGTTGAAGATAATGAAGTTCAAATACCTCTaGAGGCAGGGCAAGTTACCCAACAAGAAGTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: IPVLKIMKFKYL*RQGKLPNKKSG Trigger: GCCTGACTTCTTGTTGGGTAACTTGCCCTGCCTCCAGAGGTATTTGAACTTCATTATCTTCAACACAGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 72 bp | GTTGTTGCTGTCAGAAACCCAAGTTACACTGTACCTTaGTCTAATCAATGGTGCCCTAGTTTGGTGGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: VVAVRNPSYTVP*SNQWCPSLVGD Trigger: ATCTCCCACCAAACTAGGGCACCATTGATTAGACAAAGGTACAGTGTAACTTGGGTTTCTGACAGCAACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 72 bp | GACACAGTCTTACCCTCGATGCAATTTCACTCCATCTaGAGGCAACTGTCAAGAGTTGACCAGTTCCATTTA | + |
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Preference number: 6 (lower is better) Translates to: DTVLPSMQFHSI*RQLSRVDQFHL Trigger: TAAATGGAACTGGTCAACTCTTGACAGTTGCCTCAAGATGGAGTGAAATTGCATCGAGGGTAAGACTGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS TCA 72 bp | ATACATTTTGGCATACTCATGAGAACAGGAAGCAAATaGAAAGCGTTCAGCTGGGAGATGGAAGGATCAGGT | + |
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Preference number: 6 (lower is better) Translates to: IHFGILMRTGSK*KAFSWEMEGSG Trigger: ACCTGATCCTTCCATCTCCCAGCTGAACGCTTTTCATTTGCTTCCTGTTCTCATGAGTATGCCAAAATGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS TCA 72 bp | CATCTTCTTGGTTCAATTGTCTGGCAACCATTCCCCTaGCTCCCACCTCTGTTAGATCTTCAAAATTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: HLLGSIVWQPFP*LPPLLDLQNCS Trigger: AGAACAATTTTGAAGATCTAACAGAGGTGGGAGTCAGGGGAATGGTTGCCAGACAATTGAACCAAGAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS TCA 72 bp | AATGTGGGCAAAACTGCTGGAGTGAGAGACCTACATTaGGACCAGATTCTCTATACTTTGTCATGGCTGATA | + |
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Preference number: 6 (lower is better) Translates to: NVGKTAGVRDLH*DQILYTLSWLI Trigger: TATCAGCCATGACAAAGTATAGAGAATCTGGTCTCAATGTAGGTCTCTCACTCCAGCAGTTTTGCCCACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CCA 72 bp | TACACTTTCAGCAGAACCCTTAACTACTTCACACACTaGGCTTTACCTAGTACCCACTTAACCAATTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: YTFSRTLNYFTH*ALPSTHLTNSQ Trigger: TTGGGAATTGGTTAAGTGGGTACTAGGTAAAGCCCAGTGTGTGAAGTAGTTAAGGGTTCTGCTGAAAGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CCA 72 bp | TTCTCTAACAGCCATGAAAAATGTGGGCAAAACTGCTaGAGTGAGAGACCTACATTGAGACCAGATTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: FSNSHEKCGQNC*SERPTLRPDSL Trigger: TAGAGAATCTGGTCTCAATGTAGGTCTCTCACTCCAGCAGTTTTGCCCACATTTTTCATGGCTGTTAGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 72 bp | AAATGTGGGCAAAACTGCTGGAGTGAGAGACCTACATaGAGACCAGATTCTCTATACTTTGTCATGGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: KCGQNCWSERPT*RPDSLYFVMAD Trigger: ATCAGCCATGACAAAGTATAGAGAATCTGGTCTCAATGTAGGTCTCTCACTCCAGCAGTTTTGCCCACATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 90 bp | AGCCATGAAAAATGTGGGCAAAACTGCTGGAGTGAGAGACCTACATaGAGACCAGATTCTCTATACTTTGTCATGGCTGATAAGGTAAAG | + |
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Preference number: 6 (lower is better) Translates to: SHEKCGQNCWSERPT*RPDSLYFVMADKVK Trigger: CTTTACCTTATCAGCCATGACAAAGTATAGAGAATCTGGTCTCAATGTAGGTCTCTCACTCCAGCAGTTTTGCCCACATTTTTCATGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 72 bp | AGCAGAAAAGTAGCCAAAAATTGCTGTGGCTCCTGTTaGGCAATAATTTCTGGAACTGAGGCACAACTGAAT | + |
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Preference number: 6 (lower is better) Translates to: SRKVAKNCCGSC*AIISGTEAQLN Trigger: ATTCAGTTGTGCCTCAGTTCCAGAAATTATTGCCAAACAGGAGCCACAGCAATTTTTGGCTACTTTTCTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 90 bp | CAAGCTGTAGCTTTAACCACAGAGGTTAAACAATTCACAGTCCTGTaGTTGCTGTCAGAAACCCAAGTTACACTGTACCTTTGTCTAATC | + |
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Preference number: 6 (lower is better) Translates to: QAVALTTEVKQFTVL*LLSETQVTLYLCLI Trigger: GATTAGACAAAGGTACAGTGTAACTTGGGTTTCTGACAGCAACAACAGGACTGTGAATTGTTTAACCTCTGTGGTTAAAGCTACAGCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 90 bp | GCTGTAGCTTTAACCACAGAGGTTAAACAATTCACAGTCCTGTTGTaGCTGTCAGAAACCCAAGTTACACTGTACCTTTGTCTAATCAAT | + |
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Preference number: 6 (lower is better) Translates to: AVALTTEVKQFTVLL*LSETQVTLYLCLIN Trigger: ATTGATTAGACAAAGGTACAGTGTAACTTGGGTTTCTGACAGCAACAACAGGACTGTGAATTGTTTAACCTCTGTGGTTAAAGCTACAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 90 bp | GCTAATGCAAGAACAGGTGAAGTGAGAAGATTAACAATTCCTGTGTaGAAGATAATGAAGTTCAAATACCTCTGGAGGCAGGGCAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: ANARTGEVRRLTIPV*KIMKFKYLWRQGKL Trigger: TAACTTGCCCTGCCTCCAGAGGTATTTGAACTTCATTATCTTCAACACAGGAATTGTTAATCTTCTCACTTCACCTGTTCTTGCATTAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS TCA 72 bp | GCAACATTAAACCTTTACTGCACTCAAGCTTCCAAATaGTCTCCTGTCCCTATCCTCATGTATCTTAGATTC | + |
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Preference number: 6 (lower is better) Translates to: ATLNLYCTQASK*SPVPILMYLRF Trigger: GAATCTAAGATACATGAGGATAGGGACAGGAGATCATTTGGAAGCTTGAGTGCAGTAAAGGTTTAATGTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CCA 72 bp | CTAAACCCCTGCAACAACAAATCAATTCAACATTTATaGATATCTTTGCCTAGCCTTTTCACTCTCCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LNPCNNKSIQHL*ISLPSLFTLPP Trigger: AGGAGGGAGAGTGAAAAGGCTAGGCAAAGATATCCATAAATGTTGAATTGATTTGTTGTTGCAGGGGTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 72 bp | TTAACCACAGAGGTTAAACAATTCACAGTCCTGTTGTaGCTGTCAGAAACCCAAGTTACACTGTACCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: LTTEVKQFTVLL*LSETQVTLYLC Trigger: ACAAAGGTACAGTGTAACTTGGGTTTCTGACAGCAACAACAGGACTGTGAATTGTTTAACCTCTGTGGTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 72 bp | GGAAATAGCCTCAAATTAATTGACAAAGTTCAGTGTTaGCCCCAACTAGATTATTCTCTCTCTCCACTGCAA | + |
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Preference number: 6 (lower is better) Translates to: GNSLKLIDKVQC*PQLDYSLSPLQ Trigger: TTGCAGTGGAGAGAGAGAATAATCTAGTTGGGGCAAACACTGAACTTTGTCAATTAATTTGAGGCTATTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 72 bp | AGAACAGGTGAAGTGAGAAGATTAACAATTCCTGTGTaGAAGATAATGAAGTTCAAATACCTCTGGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: RTGEVRRLTIPV*KIMKFKYLWRQ Trigger: CTGCCTCCAGAGGTATTTGAACTTCATTATCTTCAACACAGGAATTGTTAATCTTCTCACTTCACCTGTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS TCA 72 bp | GCAATTTCACTCCATCTTGAGGCAACTGTCAAGAGTTaGCCAGTTCCATTTACTCTCATAGTTGTAAAAATT | + |
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Preference number: 6 (lower is better) Translates to: AISLHLEATVKS*PVPFTLIVVKI Trigger: AATTTTTACAACTATGAGAGTAAATGGAACTGGTCAACTCTTGACAGTTGCCTCAAGATGGAGTGAAATTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS CAA 90 bp | GGTCAAATAGGAAATAGCCTCAAATTAATTGACAAAGTTCAGTGTTaGCCCCAACTAGATTATTCTCTCTCTCCACTGCAAAAAGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: GQIGNSLKLIDKVQC*PQLDYSLSPLQKES Trigger: ACTTTCTTTTTGCAGTGGAGAGAGAGAATAATCTAGTTGGGGCAAACACTGAACTTTGTCAATTAATTTGAGGCTATTTCCTATTTGACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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| CDS TCA 72 bp | AGATGTATGCTTCAACACACTTATTGGGGAAACGTCTaGAAATATTACTACACTGAATTCAAGGGTATCCAA | + |
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Preference number: 6 (lower is better) Translates to: RCMLQHTYWGNV*KYYYTEFKGIQ Trigger: TTGGATACCCTTGAATTCAGTGTAGTAATATTTTCAGACGTTTCCCCAATAAGTGTGTTGAAGCATACATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394264.7 |
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