RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for P4HA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000149380

Ensembl transcript IDs: ENST00000331597.9, ENST00000427714.2, ENST00000524388.5, ENST00000525968.1, ENST00000531716.1, ENST00000532689.6, ENST00000540363.1

Found 492 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGTAGGTGTCTCTGGTCTGCAGGTGGGGTATATTGGGCCTCTGGATaGCAGCCTCAGCTACCACGTGGTTGGGGCTCTCTGCCAAGAGCC +
Preference number: 1 (lower is better)
Translates to: RRCLWSAGGVYWASG*QPQLPRGWGSLPRA
Trigger: GGCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGCTGTCATCCAGAGGCCCAATATACCCCACCTGCAGACCAGAGACACCTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR GCA 90 bp CACATTGAGCATGTACACGTCCTGCAGCCGCATCAGGGCCCTTGCTaGTCCCTCAAGGTCCTCAAAGGCTGGAAGGTCTTGCTCCACCTT +
Preference number: 1 (lower is better)
Translates to: HIEHVHVLQPHQGPC*SLKVLKGWKVLLHL
Trigger: AAGGTGGAGCAAGACCTTCCAGCCTTTGAGGACCTTGAGGGAGCAGCAAGGGCCCTGATGCGGCTGCAGGACGTGTACATGCTCAATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR TCA 90 bp TTGTTGGCCACCCACTTATCTCCCACCAGGACAGGACAGCCAGCATaGAGTGTGTCACTGTCCCCTTCACCACTCCTGTGCAGGTTCCAC +
Preference number: 1 (lower is better)
Translates to: LLATHLSPTRTGQPA*SVSLSPSPLLCRFH
Trigger: GTGGAACCTGCACAGGAGTGGTGAAGGGGACAGTGACACACTTCATGCTGGCTGTCCTGTCCTGGTGGGAGATAAGTGGGTGGCCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR GCA 90 bp TTTCACATTGAGCATGTACACGTCCTGCAGCCGCATCAGGGCCCTTaGTGCTCCCTCAAGGTCCTCAAAGGCTGGAAGGTCTTGCTCCAC +
Preference number: 1 (lower is better)
Translates to: FHIEHVHVLQPHQGP*CSLKVLKGWKVLLH
Trigger: GTGGAGCAAGACCTTCCAGCCTTTGAGGACCTTGAGGGAGCAGCAAGGGCCCTGATGCGGCTGCAGGACGTGTACATGCTCAATGTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR CCA 90 bp GGCTGCAAGATGCCCCATGCATTGGCAGAGCTACCCGTGGCCTGCTaGCCTCTTTGCATGACTCTCAATGCATCTCAGAAGGAGATGCTG +
Preference number: 1 (lower is better)
Translates to: GCKMPHALAELPVAC*PLCMTLNASQKEML
Trigger: CAGCATCTCCTTCTGAGATGCATTGAGAGTCATGCAAAGAGGCCAGCAGGCCACGGGTAGCTCTGCCAATGCATGGGGCATCTTGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR GCA 90 bp ATTATCTGGGCCTGTTTGTACCCACTTTGGCTGCAAGATGCCCCATaGATTGGCAGAGCTACCCGTGGCCTGCTGGCCTCTTTGCATGAC +
Preference number: 1 (lower is better)
Translates to: IIWACLYPLWLQDAP*IGRATRGLLASLHD
Trigger: GTCATGCAAAGAGGCCAGCAGGCCACGGGTAGCTCTGCCAATGCATGGGGCATCTTGCAGCCAAAGTGGGTACAAACAGGCCCAGATAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR CCA 90 bp GGAGTCAGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTaGTCCCTGTGGTCAAGGTTCAAAGTGCCAAAAGACCCACTGATC +
Preference number: 1 (lower is better)
Translates to: GVRLAPPAGVLIATS*SLWSRFKVPKDPLI
Trigger: GATCAGTGGGTCTTTTGGCACTTTGAACCTTGACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR CCA 90 bp ACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTaGGCTGCAGCAGAAGGCAGTGGGGAGAAAGTCTTAAAGTTCTGG +
Preference number: 1 (lower is better)
Translates to: TTHLGYASGRGTLPA*AAAEGSGEKVLKFW
Trigger: CCAGAACTTTAAGACTTTCTCCCCACTGCCTTCTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR GCA 90 bp TTTGGCTGCAAGATGCCCCATGCATTGGCAGAGCTACCCGTGGCCTaGTGGCCTCTTTGCATGACTCTCAATGCATCTCAGAAGGAGATG +
Preference number: 1 (lower is better)
Translates to: FGCKMPHALAELPVA*WPLCMTLNASQKEM
Trigger: CATCTCCTTCTGAGATGCATTGAGAGTCATGCAAAGAGGCCAGCAGGCCACGGGTAGCTCTGCCAATGCATGGGGCATCTTGCAGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR GCA 90 bp TCCTCTTATTATCTGGGCCTGTTTGTACCCACTTTGGCTGCAAGATaGCCCATGCATTGGCAGAGCTACCCGTGGCCTGCTGGCCTCTTT +
Preference number: 1 (lower is better)
Translates to: SSYYLGLFVPTLAAR*PMHWQSYPWPAGLF
Trigger: AAAGAGGCCAGCAGGCCACGGGTAGCTCTGCCAATGCATGGGGCATCTTGCAGCCAAAGTGGGTACAAACAGGCCCAGATAATAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR GCA 90 bp GGGCCTCTGGATGACAGCCTCAGCTACCACGTGGTTGGGGCTCTCTaGCAAGAGCCTTTCATATTTCAAGACATTCCTGGCCATCCTCTT +
Preference number: 1 (lower is better)
Translates to: GPLDDSLSYHVVGAL*QEPFIFQDIPGHPL
Trigger: AAGAGGATGGCCAGGAATGTCTTGAAATATGAAAGGCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGCTGTCATCCAGAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR GCA 90 bp TCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGGAGCTGCAGGGTCTaGGGAATTCCTGTCCATACTCATGTATCCACTTGTTGGCCACCC +
Preference number: 1 (lower is better)
Translates to: SLCQQFSLQGWSCRV*GIPVHTHVSTCWPP
Trigger: GGGTGGCCAACAAGTGGATACATGAGTATGGACAGGAATTCCGCAGACCCTGCAGCTCCAGCCCTGAAGACTGAACTGTTGGCAGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR CCA 90 bp CTCTCCGTAAGATCCTCGGAAGAGACTGACAGCCTCCTCCAGCCATaGAATGGCATGGTAATAATCCCCCATGTCATAGGCCACCTTGCC +
Preference number: 1 (lower is better)
Translates to: LSVRSSEETDSLLQP*NGMVIIPHVIGHLA
Trigger: GGCAAGGTGGCCTATGACATGGGGGATTATTACCATGCCATTCCATGGCTGGAGGAGGCTGTCAGTCTCTTCCGAGGATCTTACGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR GCA 90 bp ATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTaGTTGGGCTGCAGCAGAAGGCAGTGGGGAGAAAGTCTTAAAGTT +
Preference number: 1 (lower is better)
Translates to: MYHSSGICFWEGDTP*LGCSRRQWGESLKV
Trigger: AACTTTAAGACTTTCTCCCCACTGCCTTCTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR GCA 90 bp TCCTTCAGCCAGGCACTTTTGCTGATGCGGTACTCCACTTGTAACTaGTTCTCCCCTGATGCCACCACTGACCTCTGTAGCCATGGTTCT +
Preference number: 1 (lower is better)
Translates to: SFSQALLLMRYSTCN*FSPDATTDLCSHGS
Trigger: AGAACCATGGCTACAGAGGTCAGTGGTGGCATCAGGGGAGAAGCAGTTACAAGTGGAGTACCGCATCAGCAAAAGTGCCTGGCTGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR GCA 90 bp CCACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGGAGCTaGAGGGTCTGCGGAATTCCTGTCCATACTCATGTATCCACTTGT +
Preference number: 1 (lower is better)
Translates to: PPASLCQQFSLQGWS*RVCGIPVHTHVSTC
Trigger: ACAAGTGGATACATGAGTATGGACAGGAATTCCGCAGACCCTGCAGCTCCAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR GCA 90 bp ATGCCCCATGCATTGGCAGAGCTACCCGTGGCCTGCTGGCCTCTTTaGATGACTCTCAATGCATCTCAGAAGGAGATGCTGAATTGTTCT +
Preference number: 1 (lower is better)
Translates to: MPHALAELPVACWPL*MTLNASQKEMLNCS
Trigger: AGAACAATTCAGCATCTCCTTCTGAGATGCATTGAGAGTCATGCAAAGAGGCCAGCAGGCCACGGGTAGCTCTGCCAATGCATGGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR CCA 90 bp AGGTGGGGTATATTGGGCCTCTGGATGACAGCCTCAGCTACCACGTaGTTGGGGCTCTCTGCCAAGAGCCTTTCATATTTCAAGACATTC +
Preference number: 1 (lower is better)
Translates to: RWGILGLWMTASATT*LGLSAKSLSYFKTF
Trigger: GAATGTCTTGAAATATGAAAGGCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGCTGTCATCCAGAGGCCCAATATACCCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR TCA 90 bp CTTCTTGGTCCCTGTGGTCAAGGTTCAAAGTGCCAAAAGACCCACTaGTCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGAG +
Preference number: 1 (lower is better)
Translates to: LLGPCGQGSKCQKTH*SNLRLLRCPVPNRE
Trigger: CTCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCACTTTGAACCTTGACCACAGGGACCAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR TCA 90 bp TCCTCTTATTATCTGGGCTGTAGAGAAGAAACTCCCGAGAGAGGCTaGGGGCACACGAAACATTTCCTGCCCGGAAATAAGCAAAGGCCA +
Preference number: 1 (lower is better)
Translates to: SSYYLGCREETPERG*GHTKHFLPGNKQRP
Trigger: TGGCCTTTGCTTATTTCCGGGCAGGAAATGTTTCGTGTGCCCTCAGCCTCTCTCGGGAGTTTCTTCTCTACAGCCCAGATAATAAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR CCA 90 bp TCCTTATTTGCATTTCAAGACCCAGCTTTTGGCTCCTGGCTTCTCTaGAAAGCCACAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCA +
Preference number: 1 (lower is better)
Translates to: SLFAFQDPAFGSWLL*KATGLHQLLSANSS
Trigger: TGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTGTGGCTTTCCAGAGAAGCCAGGAGCCAAAAGCTGGGTCTTGAAATGCAAATAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR CCA 90 bp GGTTGGGGCTCTCTGCCAAGAGCCTTTCATATTTCAAGACATTCCTaGCCATCCTCTTATTATCTGGGCCTGTTTGTACCCACTTTGGCT +
Preference number: 1 (lower is better)
Translates to: GWGSLPRAFHISRHS*PSSYYLGLFVPTLA
Trigger: AGCCAAAGTGGGTACAAACAGGCCCAGATAATAAGAGGATGGCCAGGAATGTCTTGAAATATGAAAGGCTCTTGGCAGAGAGCCCCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR TCA 90 bp TTTTCCACAGTGGCTGCACCATTTCACATTCCCACCAGCAACGCATaGGAGTTCCAGTTTCTTCACATCCGTAGTGACACTTATTTTCTG +
Preference number: 1 (lower is better)
Translates to: FSTVAAPFHIPTSNA*EFQFLHIRSDTYFL
Trigger: CAGAAAATAAGTGTCACTACGGATGTGAAGAAACTGGAACTCTCATGCGTTGCTGGTGGGAATGTGAAATGGTGCAGCCACTGTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000532689.6
3UTR CCA 90 bp TTCTATGTTTATCTTTCTGAGAAATCACCAATCTGTTTTCCACAGTaGCTGCACCATTTCACATTCCCACCAGCAACGCATGAGAGTTCC +
Preference number: 1 (lower is better)
Translates to: FYVYLSEKSPICFPQ*LHHFTFPPATHESS
Trigger: GGAACTCTCATGCGTTGCTGGTGGGAATGTGAAATGGTGCAGCCACTGTGGAAAACAGATTGGTGATTTCTCAGAAAGATAAACATAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000532689.6
3UTR GCA 90 bp TTTTTAATTGTATCCATCCTAGGAAGTGTGAAGTGGTTCCTTATTTaGATTTCAAGACCCAGCTTTTGGCTCCTGGCTTCTCTGGAAAGC +
Preference number: 1 (lower is better)
Translates to: FLIVSILGSVKWFLI*ISRPSFWLLASLES
Trigger: GCTTTCCAGAGAAGCCAGGAGCCAAAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTCACACTTCCTAGGATGGATACAATTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000532689.6
3UTR TCA 90 bp CCATTCTTTCAGATACATACCTGGGAGTGGAATAACTGGGTCAGATaGCAGTTCTATGTTTATCTTTCTGAGAAATCACCAATCTGTTTT +
Preference number: 1 (lower is better)
Translates to: PFFQIHTWEWNNWVR*QFYVYLSEKSPICF
Trigger: AAAACAGATTGGTGATTTCTCAGAAAGATAAACATAGAACTGTCATCTGACCCAGTTATTCCACTCCCAGGTATGTATCTGAAAGAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532689.6
3UTR-3UTR CCA 90 bp GGCCTCTGGATGACAGCCTCAGCTACCACGTGGTTGGGGCTCTCTGCCAAGAGCAGATGCCCCATGCATTaGCAGAGCTACCCGTGGCCT +
Preference number: 2 (lower is better)
Translates to: GLWMTASATTWLGLSAKSRCPMH*QSYPWP
Trigger: AGGCCACGGGTAGCTCTGCCAATGCATGGGGCATCT...GCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGCTGTCATCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR GCA 90 bp AGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGTGGTCAAGCATGTACACGTCCTaGAGCCGCATCAGGGCCCTT +
Preference number: 2 (lower is better)
Translates to: RLAPPAGVLIATSWSLWSSMYTS*SRIRAL
Trigger: AAGGGCCCTGATGCGGCTGCAGGACGTGTACATGCT...TGACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR CCA 90 bp CCAGGACAGGACAGCCAGCATGAAGTGTGTCACTGTCCCCTTCACCACTCCTGTTGGCAGAGCTACCCGTaGCCTGCTGGCCTCTTTGCA +
Preference number: 2 (lower is better)
Translates to: PGQDSQHEVCHCPLHHSCWQSYP*PAGLFA
Trigger: TGCAAAGAGGCCAGCAGGCCACGGGTAGCTCTGCCA...ACAGGAGTGGTGAAGGGGACAGTGACACACTTCATGCTGGCTGTCCTGTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR CAA 90 bp TCTGGGCCTGTTTGTACCCACTTTGGCTGCAAGATGCCCCATGCATaGGCAGAGCTACCCGTGGCCTGCTGGCCTCTTTGCATGACTCTC +
Preference number: 2 (lower is better)
Translates to: SGPVCTHFGCKMPHA*AELPVACWPLCMTL
Trigger: GAGAGTCATGCAAAGAGGCCAGCAGGCCACGGGTAGCTCTGCCAATGCATGGGGCATCTTGCAGCCAAAGTGGGTACAAACAGGCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR CCA 90 bp ACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGGAGCTGCAGGGTCTGTCTGGGATATGCTTCTaGGAGGGGGACACTCCCTGC +
Preference number: 2 (lower is better)
Translates to: TSFSLPTVQSSGLELQGLSGICF*EGDTPC
Trigger: GCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGA...CAGACCCTGCAGCTCCAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR TCA 90 bp ACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGGAGCTGCAGGGTCTGTATTGGGCCTCTGGATaGCAGCCTCAGCTACCACGT +
Preference number: 2 (lower is better)
Translates to: TSFSLPTVQSSGLELQGLYWASG*QPQLPR
Trigger: ACGTGGTAGCTGAGGCTGTCATCCAGAGGCCCAATA...CAGACCCTGCAGCTCCAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR-3UTR TCA 90 bp TCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATTCCTAACCACAGGCGGACATCAAGGCCTGTaGGGGCAGCAATGCGGTGGT +
Preference number: 2 (lower is better)
Translates to: SPLLCRFHQNSAAFLTTGGHQGL*GQQCGG
Trigger: ACCACCGCATTGCTGCCCTCACAGGCCTTGATGTCC...GCCTGTGGTTAGGAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR TCA 90 bp GCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGTGGTCAAGAGCAGTCATCCCCTGTaGGAGAAAAGAGCCGTTTGG +
Preference number: 2 (lower is better)
Translates to: ASPSCRCPHCHFLVPVVKSSHPL*EKRAVW
Trigger: CCAAACGGCTCTTTTCTCTCACAGGGGATGACTGCT...CTTGACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR GCA 90 bp AACCCAGGGTCTGACATAGCCCCTCGTAGGTGTCTCTGGTCTGCAGGTGGGGTAACTTTGGCTGCAAGATaGCCCATGCATTGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: NPGSDIAPRRCLWSAGGVTLAAR*PMHWQS
Trigger: GCTCTGCCAATGCATGGGGCATCTTGCAGCCAAAGT...TACCCCACCTGCAGACCAGAGACACCTACGAGGGGCTATGTCAGACCCTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR CCA 90 bp CCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATTCCTAACCACGCCTCAGCTACCACGTaGTTGGGGCTCTCTGCCAAG +
Preference number: 2 (lower is better)
Translates to: PFTTPVQVPPKQCCIPNHASATT*LGLSAK
Trigger: CTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGC...GTGGTTAGGAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR-3UTR CCA 90 bp CCCCTGGTAACAACCTCTCCCTTGCCTCTGATTTGCGAGGCACAGACAAAGCTGGGATCTGGTAGAGAGTaGGCTGGGAACCCAGGGTCT +
Preference number: 2 (lower is better)
Translates to: PLVTTSPLPLICEAQTKLGSGRE*AGNPGS
Trigger: AGACCCTGGGTTCCCAGCCCACTCTCTACCAGATCC...CAGCTTTGTCTGTGCCTCGCAAATCAGAGGCAAGGGAGAGGTTGTTACCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR CAA 90 bp GGGAGTCAGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTaGGTCCCTGTGGTCAAGGTTCAAAGTGCCAAAAGACCCACTGAT +
Preference number: 2 (lower is better)
Translates to: GSQASPSCRCPHCHF*VPVVKVQSAKRPTD
Trigger: ATCAGTGGGTCTTTTGGCACTTTGAACCTTGACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTGACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR-3UTR TCA 90 bp GCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGTGGTCAAGTGCCAAAAGACCCACTaGTCGAACCTGAGACTGTTG +
Preference number: 2 (lower is better)
Translates to: ASPSCRCPHCHFLVPVVKCQKTH*SNLRLL
Trigger: CAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCA...CTTGACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR-3UTR TCA 90 bp ACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGGAGCTGCAGGGTCTGGCCAGGCACTTTTGCTaGTGCGGTACTCCACTTGTA +
Preference number: 2 (lower is better)
Translates to: TSFSLPTVQSSGLELQGLARHFC*CGTPLV
Trigger: TACAAGTGGAGTACCGCATCAGCAAAAGTGCCTGGC...CAGACCCTGCAGCTCCAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR TCA 90 bp TCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATTCCTAACCACAGGCGAGGGGGCTGCTTGGTaGCGTAGCATGGTCAAAGTG +
Preference number: 2 (lower is better)
Translates to: SPLLCRFHQNSAAFLTTGEGAAW*RSMVKV
Trigger: CACTTTGACCATGCTACGTCACCAAGCAGCCCCCTC...GCCTGTGGTTAGGAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR GCA 90 bp TCACTGTCCCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATTCGAGCTACCCGTGGCCTaGTGGCCTCTTTGCATGACT +
Preference number: 2 (lower is better)
Translates to: SLSPSPLLCRFHQNSAAFELPVA*WPLCMT
Trigger: AGTCATGCAAAGAGGCCAGCAGGCCACGGGTAGCTC...GAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGGGACAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR CAA 90 bp TACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTaGGGCTGCAGCAGAAGGCAGTGGGGAGAAAGTCTTAAAGTTCTG +
Preference number: 2 (lower is better)
Translates to: YHSSGICFWEGDTPC*GCSRRQWGESLKVL
Trigger: CAGAACTTTAAGACTTTCTCCCCACTGCCTTCTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR-3UTR TCA 90 bp AGCAGAAGGCAGTGGGGAGAAAGTCTTAAAGTTCTGGGAGTCAGGCTAGCCCCTTATTGGGCCTCTGGATaGCAGCCTCAGCTACCACGT +
Preference number: 2 (lower is better)
Translates to: SRRQWGESLKVLGVRLAPYWASG*QPQLPR
Trigger: ACGTGGTAGCTGAGGCTGTCATCCAGAGGCCCAATA...AGGGGCTAGCCTGACTCCCAGAACTTTAAGACTTTCTCCCCACTGCCTTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR CCA 90 bp ATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCAGAAGACTTCTTGGTCCCTGTaGTCAAGGTTCAAAGTGCCA +
Preference number: 2 (lower is better)
Translates to: IWDMLLGGGHSLLGLQQKTSWSL*SRFKVP
Trigger: TGGCACTTTGAACCTTGACCACAGGGACCAAGAAGT...CTTCTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR-3UTR CCA 90 bp CCAGGACAGGACAGCCAGCATGAAGTGTGTCACTGTCCCCTTCACCACTCCTGTTGTTTGTACCCACTTTaGCTGCAAGATGCCCCATGC +
Preference number: 2 (lower is better)
Translates to: PGQDSQHEVCHCPLHHSCCLYPL*LQDAPC
Trigger: GCATGGGGCATCTTGCAGCCAAAGTGGGTACAAACA...ACAGGAGTGGTGAAGGGGACAGTGACACACTTCATGCTGGCTGTCCTGTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR CCA 90 bp CAGGGCTGGAGCTGCAGGGTCTGCGGAATTCCTGTCCATACTCATGTATCCACTGGTATATTGGGCCTCTaGATGACAGCCTCAGCTACC +
Preference number: 2 (lower is better)
Translates to: QGWSCRVCGIPVHTHVSTGILGL*MTASAT
Trigger: GGTAGCTGAGGCTGTCATCCAGAGGCCCAATATACC...AGTGGATACATGAGTATGGACAGGAATTCCGCAGACCCTGCAGCTCCAGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR CAA 90 bp ACATTCTCAGTGTCCCCTGGTAACAACCTCTCCCTTGCCTCTGATTaGCGAGGCACAGACAAAGCTGACAAGGCCTTCTTCCAGGAGGCT +
Preference number: 2 (lower is better)
Translates to: TFSVSPGNNLSLASD*RGTDKADKAFFQEA
Trigger: AGCCTCCTGGAAGAAGGCCTTGTCAGCTTTGTCTGTGCCTCGCAAATCAGAGGCAAGGGAGAGGTTGTTACCAGGGGACACTGAGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
3UTR CAA 90 bp GATGCCCCATGCATTGGCAGAGCTACCCGTGGCCTGCTGGCCTCTTaGCATGACTCTCAATGCATCTCAGAAGGAGATGCTGAATTGTTC +
Preference number: 2 (lower is better)
Translates to: DAPCIGRATRGLLAS*HDSQCISEGDAELF
Trigger: GAACAATTCAGCATCTCCTTCTGAGATGCATTGAGAGTCATGCAAAGAGGCCAGCAGGCCACGGGTAGCTCTGCCAATGCATGGGGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR TCA 90 bp TGGTCCCTGTGGTCAAGGTTCAAAGTGCCAAAAGACCCACTGATCGAACCTGAGCCTCTCCCTTGCCTCTaGTTTGCGAGGCACAGACAA +
Preference number: 2 (lower is better)
Translates to: WSLWSRFKVPKDPLIEPEPLPCL*FARHRQ
Trigger: TTGTCTGTGCCTCGCAAATCAGAGGCAAGGGAGAGG...CTCAGGTTCGATCAGTGGGTCTTTTGGCACTTTGAACCTTGACCACAGGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
3UTR-3UTR GCA 90 bp CCAGGACAGGACAGCCAGCATGAAGTGTGTCACTGTCCCCTTCACCACTCCTGTGTTCCACCAAAACAGTaGTGCATTCCTAACCACAGG +
Preference number: 2 (lower is better)
Translates to: PGQDSQHEVCHCPLHHSCVPPKQ*CIPNHR
Trigger: CCTGTGGTTAGGAATGCAGCACTGTTTTGGTGGAAC...ACAGGAGTGGTGAAGGGGACAGTGACACACTTCATGCTGGCTGTCCTGTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR-3UTR GCA 90 bp ACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGGAGCTGCAGGGTCTGTTCTGTAGAGGGGGCTaGTTGGTGACTTTTGCTGAT +
Preference number: 2 (lower is better)
Translates to: TSFSLPTVQSSGLELQGLFCRGG*LVTFAD
Trigger: ATCAGCAAAAGTCACCAAGCAGCCCCCTCTACAGAA...CAGACCCTGCAGCTCCAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR CCA 90 bp GACAGCCTCAGCTACCACGTGGTTGGGGCTCTCTGCCAAGAGCCTTTCATATTTGGTATATTGGGCCTCTaGATGACAGCCTCAGCTACC +
Preference number: 2 (lower is better)
Translates to: DSLSYHVVGALCQEPFIFGILGL*MTASAT
Trigger: GGTAGCTGAGGCTGTCATCCAGAGGCCCAATATACC...AAATATGAAAGGCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR CAA 90 bp TGGGGTATATTGGGCCTCTGGATGACAGCCTCAGCTACCACGTGGTaGGGGCTCTCTGCCAAGAGCCTTTCATATTTCAAGACATTCCTG +
Preference number: 2 (lower is better)
Translates to: WGILGLWMTASATTW*GLSAKSLSYFKTFL
Trigger: CAGGAATGTCTTGAAATATGAAAGGCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGCTGTCATCCAGAGGCCCAATATACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR-3UTR TCA 90 bp GTGCATCCTACTCTGACTTCCGTGGCTGGGGCAGATCAAATGTACATTCTCAGTCCTCTCCCTTGCCTCTaGTTTGCGAGGCACAGACAA +
Preference number: 2 (lower is better)
Translates to: VHPTLTSVAGADQMYILSPLPCL*FARHRQ
Trigger: TTGTCTGTGCCTCGCAAATCAGAGGCAAGGGAGAGG...ACTGAGAATGTACATTTGATCTGCCCCAGCCACGGAAGTCAGAGTAGGATGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
3UTR-3UTR TCA 90 bp CTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGAGTATCTGAACTGTGCATCCTACTCTaGCTTCCGTGGCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: LIEPETVEMSCSQQRVSELCILL*LPWLGQ
Trigger: CTGCCCCAGCCACGGAAGTCAGAGTAGGATGCACAG...TTCAGATACTCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR-3UTR TCA 90 bp CCAGGACAGGACAGCCAGCATGAAGTGTGTCACTGTCCCCTTCACCACTCCTGTCTCAGAAGGAGATGCTaGATTGTTCTAATGCTCCCA +
Preference number: 2 (lower is better)
Translates to: PGQDSQHEVCHCPLHHSCLRRRC*IVLMLP
Trigger: TGGGAGCATTAGAACAATTCAGCATCTCCTTCTGAG...ACAGGAGTGGTGAAGGGGACAGTGACACACTTCATGCTGGCTGTCCTGTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR TCA 90 bp GCCTCTGATTTGCGAGGCACAGACAAAGCTGACAAGGCCTTCTTCCAGGAGGCTCTTGGTGACTTTTGCTaGTGCGGTACTCCACTTGTA +
Preference number: 2 (lower is better)
Translates to: ASDLRGTDKADKAFFQEALGDFC*CGTPLV
Trigger: TACAAGTGGAGTACCGCATCAGCAAAAGTCACCAAG...AGCCTCCTGGAAGAAGGCCTTGTCAGCTTTGTCTGTGCCTCGCAAATCAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR GCA 90 bp CCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATTCCTAACCACTGTACCCACTTTGGCTaGAAGATGCCCCATGCATTG +
Preference number: 2 (lower is better)
Translates to: PFTTPVQVPPKQCCIPNHCTHFG*KMPHAL
Trigger: CAATGCATGGGGCATCTTGCAGCCAAAGTGGGTACA...GTGGTTAGGAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR GCA 90 bp CCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATTCCTAACCACCATAGTGTCCTCCGATaGCATAGTTCACCACCTGCA +
Preference number: 2 (lower is better)
Translates to: PFTTPVQVPPKQCCIPNHHSVLR*HSSPPA
Trigger: TGCAGGTGGTGAACTATGGCATCGGAGGACACTATG...GTGGTTAGGAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR CCA 90 bp GTCTGCGGAATTCCTGTCCATACTCATGTATCCACTTGTTGGCCACCCACTTATCTACCCGTGGCCTGCTaGCCTCTTTGCATGACTCTC +
Preference number: 2 (lower is better)
Translates to: VCGIPVHTHVSTCWPPTYLPVAC*PLCMTL
Trigger: GAGAGTCATGCAAAGAGGCCAGCAGGCCACGGGTAG...ATAAGTGGGTGGCCAACAAGTGGATACATGAGTATGGACAGGAATTCCGCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR CCA 90 bp CCAGGACAGGACAGCCAGCATGAAGTGTGTCACTGTCCCCTTCACCACTCCTGTGGTAGGCGTTGGAATTaGTCTCATAGGAACAGTAGA +
Preference number: 2 (lower is better)
Translates to: PGQDSQHEVCHCPLHHSCGRRWN*SHRNSR
Trigger: TCTACTGTTCCTATGAGACCAATTCCAACGCCTACC...ACAGGAGTGGTGAAGGGGACAGTGACACACTTCATGCTGGCTGTCCTGTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR-3UTR CCA 90 bp TGGCTTCTCTGGAAAGCCACAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAGAGGGTCACCAGTTTTaGGTCAACAGTGTCCTTCAG +
Preference number: 2 (lower is better)
Translates to: WLLWKATGLHQLLSANSSEGHQF*VNSVLQ
Trigger: CTGAAGGACACTGTTGACCCAAAACTGGTGACCCTC...TGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTGTGGCTTTCCAGAGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR CCA 90 bp GACAGCCTCAGCTACCACGTGGTTGGGGCTCTCTGCCAAGAGCCTTTCATATTTCCTCCAGCCATGGAATaGCATGGTAATAATCCCCCA +
Preference number: 2 (lower is better)
Translates to: DSLSYHVVGALCQEPFIFPPAME*HGNNPP
Trigger: TGGGGGATTATTACCATGCCATTCCATGGCTGGAGG...AAATATGAAAGGCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR TCA 90 bp TTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGACTCCCGAGAGAGGCTaGGGGCACACGAAACATTTC +
Preference number: 2 (lower is better)
Translates to: LYNVPLIWDMLLGGGHSLTPERG*GHTKHF
Trigger: GAAATGTTTCGTGTGCCCTCAGCCTCTCTCGGGAGT...CAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR GCA 90 bp GTGCATCCTACTCTGACTTCCGTGGCTGGGGCAGATCAAATGTACATTCTCAGTCACTCATCTGGGATATaGTTCTGGGAGGGGGACACT +
Preference number: 2 (lower is better)
Translates to: VHPTLTSVAGADQMYILSHSSGI*FWEGDT
Trigger: AGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTG...ACTGAGAATGTACATTTGATCTGCCCCAGCCACGGAAGTCAGAGTAGGATGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
3UTR-3UTR GCA 90 bp CTGCGGAATTCCTGTCCATACTCATGTATCCACTTGTTGGCCACCCACTTATCTCTGCAAGATGCCCCATaGATTGGCAGAGCTACCCGT +
Preference number: 2 (lower is better)
Translates to: LRNSCPYSCIHLLATHLSLQDAP*IGRATR
Trigger: ACGGGTAGCTCTGCCAATGCATGGGGCATCTTGCAG...AGATAAGTGGGTGGCCAACAAGTGGATACATGAGTATGGACAGGAATTCCGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR GCA 90 bp CCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATTCCTAACCACGTGGTTGGGGCTCTCTaGCAAGAGCCTTTCATATTT +
Preference number: 2 (lower is better)
Translates to: PFTTPVQVPPKQCCIPNHVVGAL*QEPFIF
Trigger: AAATATGAAAGGCTCTTGGCAGAGAGCCCCAACCAC...GTGGTTAGGAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR-3UTR GCA 90 bp CTGCGGAATTCCTGTCCATACTCATGTATCCACTTGTTGGCCACCCACTTATCTCATCAGGGCCCTTGCTaGTCCCTCAAGGTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: LRNSCPYSCIHLLATHLSHQGPC*SLKVLK
Trigger: TTTGAGGACCTTGAGGGAGCAGCAAGGGCCCTGATG...AGATAAGTGGGTGGCCAACAAGTGGATACATGAGTATGGACAGGAATTCCGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR GCA 90 bp CCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATTCCTAACCACTGTCATAGGCCACCTTaGCAACTTGGAAGCAGTCAT +
Preference number: 2 (lower is better)
Translates to: PFTTPVQVPPKQCCIPNHCHRPP*QLGSSH
Trigger: ATGACTGCTTCCAAGTTGGCAAGGTGGCCTATGACA...GTGGTTAGGAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR CCA 90 bp ACTGTCCCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATTCCTAATGTACCACTCATCTaGGATATGCTTCTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: TVPFTTPVQVPPKQCCIPNVPLI*DMLLGG
Trigger: CCCTCCCAGAAGCATATCCCAGATGAGTGGTACATT...AGGAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGGGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR CAA 90 bp CCCGGAAATAAGCAAAGGCCAAGTGATCCAAGGCATCTTCTAGACTaGCCTCATCCTCTGTCTTCCACTCTCCGTAAGATCCTCGGAAGA +
Preference number: 2 (lower is better)
Translates to: PGNKQRPSDPRHLLD*PHPLSSTLRKILGR
Trigger: TCTTCCGAGGATCTTACGGAGAGTGGAAGACAGAGGATGAGGCAAGTCTAGAAGATGCCTTGGATCACTTGGCCTTTGCTTATTTCCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR TCA 90 bp AAAGTGCCAAAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCAGGCACAGACAAAGCTaGCAAGGCCTTCTTCCAGGA +
Preference number: 2 (lower is better)
Translates to: KVPKDPLIEPETVEMSCSRHRQS*QGLLPG
Trigger: TCCTGGAAGAAGGCCTTGTCAGCTTTGTCTGTGCCT...GGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
3UTR-3UTR TCA 90 bp TCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATTCCTAACCACAGGCAATTTTCTGAGCCTCTaGGTCACTGACGAAGTCATG +
Preference number: 2 (lower is better)
Translates to: SPLLCRFHQNSAAFLTTGNFLSL*VTDEVM
Trigger: CATGACTTCGTCAGTGACTCAGAGGCTCAGAAAATT...GCCTGTGGTTAGGAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR-3UTR GCA 90 bp CTGCGGAATTCCTGTCCATACTCATGTATCCACTTGTTGGCCACCCACTTATCTTGCAGGTGTCCTCATTaGCACTTCTTGGTCCCTGTG +
Preference number: 2 (lower is better)
Translates to: LRNSCPYSCIHLLATHLSCRCPH*HFLVPV
Trigger: CACAGGGACCAAGAAGTGGCAATGAGGACACCTGCA...AGATAAGTGGGTGGCCAACAAGTGGATACATGAGTATGGACAGGAATTCCGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR CCA 90 bp AAATCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACGGCTCCTGGCTTCTCTaGAAAGCCACAGGACTCCAC +
Preference number: 2 (lower is better)
Translates to: KSLYNVPLIWDMLLGGGHGSWLL*KATGLH
Trigger: GTGGAGTCCTGTGGCTTTCCAGAGAAGCCAGGAGCC...GTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
3UTR-3UTR CCA 90 bp AAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGATCCTACCCCAGCTTTTaGCTCCTGGCTTCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: KDPLIEPETVEMSCSQQRSYPSF*LLASLE
Trigger: TTCCAGAGAAGCCAGGAGCCAAAAGCTGGGGTAGGA...TCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
3UTR-3UTR CCA 90 bp GTAGAGAGCAATGTAGGGCTCCAGGTGGATGACCTCCTTCCGGATGGGCTGGAGATTTCAAGACATTCCTaGCCATCCTCTTATTATCTG +
Preference number: 2 (lower is better)
Translates to: VESNVGLQVDDLLPDGLEISRHS*PSSYYL
Trigger: CAGATAATAAGAGGATGGCCAGGAATGTCTTGAAAT...CTCCAGCCCATCCGGAAGGAGGTCATCCACCTGGAGCCCTACATTGCTCTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR-3UTR TCA 90 bp CTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGAGTATCTGAAAGGCACAGACAAAGCTaGCAAGGCCTTCTTCCAGGA +
Preference number: 2 (lower is better)
Translates to: LIEPETVEMSCSQQRVSERHRQS*QGLLPG
Trigger: TCCTGGAAGAAGGCCTTGTCAGCTTTGTCTGTGCCT...TTCAGATACTCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
3UTR-3UTR GCA 90 bp AAAGTGCCAAAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCCTTCACCACTCCTGTaGAGGTTCCACCAAAACAGT +
Preference number: 2 (lower is better)
Translates to: KVPKDPLIEPETVEMSCSPSPLL*RFHQNS
Trigger: ACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGG...GGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR CCA 90 bp AAAAATCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACGGCTCCTGGCTTCTCTaGAAAGCCACAGGACTCCAC +
Preference number: 2 (lower is better)
Translates to: KNPYIMYHSSGICFWEGDGSWLL*KATGLH
Trigger: GTGGAGTCCTGTGGCTTTCCAGAGAAGCCAGGAGCC...GTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
3UTR-3UTR CCA 90 bp GCTGCTATGACCATGGGTGTACAGCTATCATTCCATTCTTTCAGATACATACCTGGCTCCTGGCTTCTCTaGAAAGCCACAGGACTCCAC +
Preference number: 2 (lower is better)
Translates to: AAMTMGVQLSFHSFRYIPGSWLL*KATGLH
Trigger: GTGGAGTCCTGTGGCTTTCCAGAGAAGCCAGGAGCC...AGGTATGTATCTGAAAGAATGGAATGATAGCTGTACACCCATGGTCATAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532689.6
3UTR-3UTR CCA 90 bp ATTGTATCCATCCTAGGAAGTGTGAAGTGGTTCCTTATTTGCATTTCAAGACCCGGCTCCTGGCTTCTCTaGAAAGCCACAGGACTCCAC +
Preference number: 2 (lower is better)
Translates to: IVSILGSVKWFLICISRPGSWLL*KATGLH
Trigger: GTGGAGTCCTGTGGCTTTCCAGAGAAGCCAGGAGCC...GGGTCTTGAAATGCAAATAAGGAACCACTTCACACTTCCTAGGATGGATACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000532689.6
3UTR-3UTR CCA 90 bp GTCTGCGGAATTCCTGTCCATACTCATGTATCCACTTGTTGGCCACCCACTTATTCTGACTTCCGTGGCTaGGGCAGATCAAATGTACAT +
Preference number: 2 (lower is better)
Translates to: VCGIPVHTHVSTCWPPTYSDFRG*GRSNVH
Trigger: ATGTACATTTGATCTGCCCCAGCCACGGAAGTCAGA...ATAAGTGGGTGGCCAACAAGTGGATACATGAGTATGGACAGGAATTCCGCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR CCA 90 bp AAAGTGCCAAAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCACTTCTTGGTCCCTGTaGTCAAGGTTCAAAGTGCCA +
Preference number: 2 (lower is better)
Translates to: KVPKDPLIEPETVEMSCSTSWSL*SRFKVP
Trigger: TGGCACTTTGAACCTTGACCACAGGGACCAAGAAGT...GGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR-3UTR CCA 90 bp ACGAAACATTTCCTGCCCGGAAATAAGCAAAGGCCAAGTGATCCAAGGCATCTTAAGGTCCTCAAAGGCTaGAAGGTCTTGCTCCACCTT +
Preference number: 2 (lower is better)
Translates to: TKHFLPGNKQRPSDPRHLKVLKG*KVLLHL
Trigger: AAGGTGGAGCAAGACCTTCCAGCCTTTGAGGACCTT...AAGATGCCTTGGATCACTTGGCCTTTGCTTATTTCCGGGCAGGAAATGTTTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR TCA 90 bp AATCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTTGCCAAAAGACCCACTaGTCGAACCTGAGACTGTTG +
Preference number: 2 (lower is better)
Translates to: NPYIMYHSSGICFWEGDTCQKTH*SNLRLL
Trigger: CAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCA...AGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR-3UTR CCA 90 bp AAAAATCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACCCTCGTAGGTGTCTCTaGTCTGCAGGTGGGGTATAT +
Preference number: 2 (lower is better)
Translates to: KNPYIMYHSSGICFWEGDPRRCL*SAGGVY
Trigger: ATATACCCCACCTGCAGACCAGAGACACCTACGAGG...GTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR GCA 90 bp GTTTATCTTTCTGAGAAATCACCAATCTGTTTTCCACAGTGGCTGCACCATTTCGCCTGCTGGCCTCTTTaGATGACTCTCAATGCATCT +
Preference number: 2 (lower is better)
Translates to: VYLSEKSPICFPQWLHHFACWPL*MTLNAS
Trigger: AGATGCATTGAGAGTCATGCAAAGAGGCCAGCAGGC...GAAATGGTGCAGCCACTGTGGAAAACAGATTGGTGATTTCTCAGAAAGATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR CCA 90 bp TATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTATTTCAAGACATTCCTaGCCATCCTCTTATTATCTG +
Preference number: 2 (lower is better)
Translates to: YNVPLIWDMLLGGGHSLLISRHS*PSSYYL
Trigger: CAGATAATAAGAGGATGGCCAGGAATGTCTTGAAAT...AAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR CCA 90 bp GACAGTTCTATGTTTATCTTTCTGAGAAATCACCAATCTGTTTTCCACAGTGGCAGGGCAGCAATGCGGTaGTTGAGGGTCACCAGTTTT +
Preference number: 2 (lower is better)
Translates to: DSSMFIFLRNHQSVFHSGRAAMR*LRVTSF
Trigger: AAAACTGGTGACCCTCAACCACCGCATTGCTGCCCT...GCCACTGTGGAAAACAGATTGGTGATTTCTCAGAAAGATAAACATAGAACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR GCA 90 bp GACAGTTCTATGTTTATCTTTCTGAGAAATCACCAATCTGTTTTCCACAGTGGCAAGTGGTTCCTTATTTaGATTTCAAGACCCAGCTTT +
Preference number: 2 (lower is better)
Translates to: DSSMFIFLRNHQSVFHSGKWFLI*ISRPSF
Trigger: AAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTT...GCCACTGTGGAAAACAGATTGGTGATTTCTCAGAAAGATAAACATAGAACTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000532689.6
3UTR GCA 72 bp GAGCATGTACACGTCCTGCAGCCGCATCAGGGCCCTTaGTGCTCCCTCAAGGTCCTCAAAGGCTGGAAGGTC +
Preference number: 3 (lower is better)
Translates to: EHVHVLQPHQGP*CSLKVLKGWKV
Trigger: GACCTTCCAGCCTTTGAGGACCTTGAGGGAGCAGCAAGGGCCCTGATGCGGCTGCAGGACGTGTACATGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR CAA 90 bp CTGGGAGTCAGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTCCTACCCCAGCTTTaGGCTCCTGGCTTCTCTGGA +
Preference number: 3 (lower is better)
Translates to: LGVRLAPPAGVLIATSWSLLPQL*APGFSG
Trigger: TCCAGAGAAGCCAGGAGCCAAAAGCTGGGGTAGGAG...GGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTGACTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
3UTR TCA 72 bp CTCTCTGAAAGACACCTCGGGCCAGGCCTTTCACATTaGGCATGTACACGTCCTGCAGCCGCATCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: LSERHLGPGLSH*ACTRPAAASGP
Trigger: GGGCCCTGATGCGGCTGCAGGACGTGTACATGCTCAATGTGAAAGGCCTGGCCCGAGGTGTCTTTCAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR GCA 72 bp CATGTACACGTCCTGCAGCCGCATCAGGGCCCTTGCTaGTCCCTCAAGGTCCTCAAAGGCTGGAAGGTCTTG +
Preference number: 3 (lower is better)
Translates to: HVHVLQPHQGPC*SLKVLKGWKVL
Trigger: CAAGACCTTCCAGCCTTTGAGGACCTTGAGGGAGCAGCAAGGGCCCTGATGCGGCTGCAGGACGTGTACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR CCA 72 bp GTGTCTCTGGTCTGCAGGTGGGGTATATTGGGCCTCTaGATGACAGCCTCAGCTACCACGTGGTTGGGGCTC +
Preference number: 3 (lower is better)
Translates to: VSLVCRWGILGL*MTASATTWLGL
Trigger: GAGCCCCAACCACGTGGTAGCTGAGGCTGTCATCCAGAGGCCCAATATACCCCACCTGCAGACCAGAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR CCA 72 bp GGCCGGACATCAAGGCCTGTGAGGGCAGCAATGCGGTaGTTGAGGGTCACCAGTTTTGGGTCAACAGTGTCC +
Preference number: 3 (lower is better)
Translates to: GRTSRPVRAAMR*LRVTSFGSTVS
Trigger: GGACACTGTTGACCCAAAACTGGTGACCCTCAACCACCGCATTGCTGCCCTCACAGGCCTTGATGTCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR CAA 90 bp GGCCTCTGGATGACAGCCTCAGCTACCACGTGGTTGGGGCTCTCTGCCAAGAGCTCCCTTGCCTCTGATTaGCGAGGCACAGACAAAGCT +
Preference number: 3 (lower is better)
Translates to: GLWMTASATTWLGLSAKSSLASD*RGTDKA
Trigger: AGCTTTGTCTGTGCCTCGCAAATCAGAGGCAAGGGA...GCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGCTGTCATCCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR CAA 90 bp GGCCTCTGGATGACAGCCTCAGCTACCACGTGGTTGGGGCTCTCTGCCAAGAGCCCTCATTGCCACTTCTaGGTCCCTGTGGTCAAGGTT +
Preference number: 3 (lower is better)
Translates to: GLWMTASATTWLGLSAKSPHCHF*VPVVKV
Trigger: AACCTTGACCACAGGGACCAAGAAGTGGCAATGAGG...GCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGCTGTCATCCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR CAA 90 bp TATCTCCCACCAGGACAGGACAGCCAGCATGAAGTGTGTCACTGTCCCCTTCACTCAGCTACCACGTGGTaGGGGCTCTCTGCCAAGAGC +
Preference number: 3 (lower is better)
Translates to: YLPPGQDSQHEVCHCPLHSATTW*GLSAKS
Trigger: GCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGA...GTGAAGGGGACAGTGACACACTTCATGCTGGCTGTCCTGTCCTGGTGGGAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR-3UTR CAA 90 bp CAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGGAGCTGGCAGCAATGCGGTGGTaGAGGGTCACCAGTTTTGGG +
Preference number: 3 (lower is better)
Translates to: QDSTSFSLPTVQSSGLELAAMRW*RVTSFG
Trigger: CCCAAAACTGGTGACCCTCAACCACCGCATTGCTGC...CAGCTCCAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR CAA 90 bp GCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGTGGTCAAGGCCAGGCCTTTCACATaGAGCATGTACACGTCCTGC +
Preference number: 3 (lower is better)
Translates to: ASPSCRCPHCHFLVPVVKARPFT*SMYTSC
Trigger: GCAGGACGTGTACATGCTCAATGTGAAAGGCCTGGC...CTTGACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR GCA 72 bp TCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTaGTTGGGCTGCAGCAGAAGGCAGTGGGGAGAAAGT +
Preference number: 3 (lower is better)
Translates to: SSGICFWEGDTP*LGCSRRQWGES
Trigger: ACTTTCTCCCCACTGCCTTCTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR-3UTR CAA 90 bp ATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCAGAAGTCCCTTGCCTCTGATTaGCGAGGCACAGACAAAGCT +
Preference number: 3 (lower is better)
Translates to: IWDMLLGGGHSLLGLQQKSLASD*RGTDKA
Trigger: AGCTTTGTCTGTGCCTCGCAAATCAGAGGCAAGGGA...CTTCTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
3UTR-3UTR CAA 90 bp ACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGGAGCTGCAGGGTCTGGGCCTGCTGGCCTCTTaGCATGACTCTCAATGCATC +
Preference number: 3 (lower is better)
Translates to: TSFSLPTVQSSGLELQGLGLLAS*HDSQCI
Trigger: GATGCATTGAGAGTCATGCAAAGAGGCCAGCAGGCC...CAGACCCTGCAGCTCCAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR TCA 72 bp ACCCACTTATCTCCCACCAGGACAGGACAGCCAGCATaGAGTGTGTCACTGTCCCCTTCACCACTCCTGTGC +
Preference number: 3 (lower is better)
Translates to: THLSPTRTGQPA*SVSLSPSPLLC
Trigger: GCACAGGAGTGGTGAAGGGGACAGTGACACACTTCATGCTGGCTGTCCTGTCCTGGTGGGAGATAAGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR GCA 72 bp GGGAGTCAGGCTAGCCCCTCCTGCAGGTGTCCTCATTaGCACTTCTTGGTCCCTGTGGTCAAGGTTCAAAGT +
Preference number: 3 (lower is better)
Translates to: GSQASPSCRCPH*HFLVPVVKVQS
Trigger: ACTTTGAACCTTGACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTGACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR GCA 72 bp TATCTGGGCCTGTTTGTACCCACTTTGGCTGCAAGATaGCCCATGCATTGGCAGAGCTACCCGTGGCCTGCT +
Preference number: 3 (lower is better)
Translates to: YLGLFVPTLAAR*PMHWQSYPWPA
Trigger: AGCAGGCCACGGGTAGCTCTGCCAATGCATGGGGCATCTTGCAGCCAAAGTGGGTACAAACAGGCCCAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR GCA 72 bp TCTCTGGAAAGCCACAGGACTCCACCAGCTTCTCTCTaGCAACAGTTCAGTCTTCAGGGCTGGAGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: SLESHRTPPASL*QQFSLQGWSCR
Trigger: CCTGCAGCTCCAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTGTGGCTTTCCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR CCA 72 bp TTTGTACCCACTTTGGCTGCAAGATGCCCCATGCATTaGCAGAGCTACCCGTGGCCTGCTGGCCTCTTTGCA +
Preference number: 3 (lower is better)
Translates to: FVPTLAARCPMH*QSYPWPAGLFA
Trigger: TGCAAAGAGGCCAGCAGGCCACGGGTAGCTCTGCCAATGCATGGGGCATCTTGCAGCCAAAGTGGGTACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR CAA 90 bp TGCCTCATCCTCTGTCTTCCACTCTCCGTAAGATCCTCGGAAGAGACTGACAGCCTCCTACCCCAGCTTTaGGCTCCTGGCTTCTCTGGA +
Preference number: 3 (lower is better)
Translates to: CLILCLPLSVRSSEETDSLLPQL*APGFSG
Trigger: TCCAGAGAAGCCAGGAGCCAAAAGCTGGGGTAGGAG...GCTGTCAGTCTCTTCCGAGGATCTTACGGAGAGTGGAAGACAGAGGATGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR GCA 72 bp GCATTGGCAGAGCTACCCGTGGCCTGCTGGCCTCTTTaGATGACTCTCAATGCATCTCAGAAGGAGATGCTG +
Preference number: 3 (lower is better)
Translates to: ALAELPVACWPL*MTLNASQKEML
Trigger: CAGCATCTCCTTCTGAGATGCATTGAGAGTCATGCAAAGAGGCCAGCAGGCCACGGGTAGCTCTGCCAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR GCA 72 bp AAGATGCCCCATGCATTGGCAGAGCTACCCGTGGCCTaGTGGCCTCTTTGCATGACTCTCAATGCATCTCAG +
Preference number: 3 (lower is better)
Translates to: KMPHALAELPVA*WPLCMTLNASQ
Trigger: CTGAGATGCATTGAGAGTCATGCAAAGAGGCCAGCAGGCCACGGGTAGCTCTGCCAATGCATGGGGCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR CCA 72 bp ATGCCCCATGCATTGGCAGAGCTACCCGTGGCCTGCTaGCCTCTTTGCATGACTCTCAATGCATCTCAGAAG +
Preference number: 3 (lower is better)
Translates to: MPHALAELPVAC*PLCMTLNASQK
Trigger: CTTCTGAGATGCATTGAGAGTCATGCAAAGAGGCCAGCAGGCCACGGGTAGCTCTGCCAATGCATGGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR CAA 90 bp GACAGCCTCAGCTACCACGTGGTTGGGGCTCTCTGCCAAGAGCCTTTCATATTTCTGCAGGTGTCCTCATaGCCACTTCTTGGTCCCTGT +
Preference number: 3 (lower is better)
Translates to: DSLSYHVVGALCQEPFIFLQVSS*PLLGPC
Trigger: ACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAG...AAATATGAAAGGCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR GCA 72 bp CAGGCACTTTTGCTGATGCGGTACTCCACTTGTAACTaGTTCTCCCCTGATGCCACCACTGACCTCTGTAGC +
Preference number: 3 (lower is better)
Translates to: QALLLMRYSTCN*FSPDATTDLCS
Trigger: GCTACAGAGGTCAGTGGTGGCATCAGGGGAGAAGCAGTTACAAGTGGAGTACCGCATCAGCAAAAGTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR CAA 90 bp TATCTCCCACCAGGACAGGACAGCCAGCATGAAGTGTGTCACTGTCCCCTTCACTCATGTATCCACTTGTaGGCCACCCACTTATCTCCC +
Preference number: 3 (lower is better)
Translates to: YLPPGQDSQHEVCHCPLHSCIHL*ATHLSP
Trigger: GGGAGATAAGTGGGTGGCCAACAAGTGGATACATGA...GTGAAGGGGACAGTGACACACTTCATGCTGGCTGTCCTGTCCTGGTGGGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR TCA 72 bp CTGTCTTCCACTCTCCGTAAGATCCTCGGAAGAGACTaGCAGCCTCCTCCAGCCATGGAATGGCATGGTAAT +
Preference number: 3 (lower is better)
Translates to: LSSTLRKILGRD*QPPPAMEWHGN
Trigger: ATTACCATGCCATTCCATGGCTGGAGGAGGCTGTCAGTCTCTTCCGAGGATCTTACGGAGAGTGGAAGACAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR GCA 72 bp CTCTTATTATCTGGGCCTGTTTGTACCCACTTTGGCTaGAAGATGCCCCATGCATTGGCAGAGCTACCCGTG +
Preference number: 3 (lower is better)
Translates to: LLLSGPVCTHFG*KMPHALAELPV
Trigger: CACGGGTAGCTCTGCCAATGCATGGGGCATCTTGCAGCCAAAGTGGGTACAAACAGGCCCAGATAATAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR GCA 72 bp TCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGGAGCTaGAGGGTCTGCGGAATTCCTGTCCATACTCATGTA +
Preference number: 3 (lower is better)
Translates to: SLCQQFSLQGWS*RVCGIPVHTHV
Trigger: TACATGAGTATGGACAGGAATTCCGCAGACCCTGCAGCTCCAGCCCTGAAGACTGAACTGTTGGCAGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR CCA 72 bp CCTTATATAATGTACCACTCATCTGGGATATGCTTCTaGGAGGGGGACACTCCCTGCTTGGGCTGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: PYIMYHSSGICF*EGDTPCLGCSR
Trigger: TCTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR CCA 72 bp ATATTGGGCCTCTGGATGACAGCCTCAGCTACCACGTaGTTGGGGCTCTCTGCCAAGAGCCTTTCATATTTC +
Preference number: 3 (lower is better)
Translates to: ILGLWMTASATT*LGLSAKSLSYF
Trigger: GAAATATGAAAGGCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGCTGTCATCCAGAGGCCCAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR CCA 72 bp AGATCCTCGGAAGAGACTGACAGCCTCCTCCAGCCATaGAATGGCATGGTAATAATCCCCCATGTCATAGGC +
Preference number: 3 (lower is better)
Translates to: RSSEETDSLLQP*NGMVIIPHVIG
Trigger: GCCTATGACATGGGGGATTATTACCATGCCATTCCATGGCTGGAGGAGGCTGTCAGTCTCTTCCGAGGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR CAA 90 bp AGCAGAAGGCAGTGGGGAGAAAGTCTTAAAGTTCTGGGAGTCAGGCTAGCCCCTAGGCATCTTCTAGACTaGCCTCATCCTCTGTCTTCC +
Preference number: 3 (lower is better)
Translates to: SRRQWGESLKVLGVRLAPRHLLD*PHPLSS
Trigger: GGAAGACAGAGGATGAGGCAAGTCTAGAAGATGCCT...AGGGGCTAGCCTGACTCCCAGAACTTTAAGACTTTCTCCCCACTGCCTTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR-3UTR CAA 90 bp CCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCGTAACAACCTCTCCCTaGCCTCTGATTTGCGAGGCA +
Preference number: 3 (lower is better)
Translates to: PYIMYHSSGICFWEGDTPVTTSP*PLICEA
Trigger: TGCCTCGCAAATCAGAGGCAAGGGAGAGGTTGTTAC...GGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
3UTR-3UTR CAA 90 bp TGGAAAGCCACAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGATTATCTGGGCCTGTTaGTACCCACTTTGGCTGCAA +
Preference number: 3 (lower is better)
Translates to: WKATGLHQLLSANSSVFRIIWAC*YPLWLQ
Trigger: TTGCAGCCAAAGTGGGTACAAACAGGCCCAGATAAT...CCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTGTGGCTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR TCA 72 bp CCCTGTGGTCAAGGTTCAAAGTGCCAAAAGACCCACTaGTCGAACCTGAGACTGTTGAGATGTCCTGTTCCC +
Preference number: 3 (lower is better)
Translates to: PCGQGSKCQKTH*SNLRLLRCPVP
Trigger: GGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCACTTTGAACCTTGACCACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR TCA 72 bp TATCTGGGCTGTAGAGAAGAAACTCCCGAGAGAGGCTaGGGGCACACGAAACATTTCCTGCCCGGAAATAAG +
Preference number: 3 (lower is better)
Translates to: YLGCREETPERG*GHTKHFLPGNK
Trigger: CTTATTTCCGGGCAGGAAATGTTTCGTGTGCCCTCAGCCTCTCTCGGGAGTTTCTTCTCTACAGCCCAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR GCA 72 bp CAACAGTTCAGTCTTCAGGGCTGGAGCTGCAGGGTCTaGGGAATTCCTGTCCATACTCATGTATCCACTTGT +
Preference number: 3 (lower is better)
Translates to: QQFSLQGWSCRV*GIPVHTHVSTC
Trigger: ACAAGTGGATACATGAGTATGGACAGGAATTCCGCAGACCCTGCAGCTCCAGCCCTGAAGACTGAACTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR CCA 72 bp CATCCTCTTATTATCTGGGCCTGTTTGTACCCACTTTaGCTGCAAGATGCCCCATGCATTGGCAGAGCTACC +
Preference number: 3 (lower is better)
Translates to: HPLIIWACLYPL*LQDAPCIGRAT
Trigger: GGTAGCTCTGCCAATGCATGGGGCATCTTGCAGCCAAAGTGGGTACAAACAGGCCCAGATAATAAGAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR TCA 72 bp GTGGCTGCACCATTTCACATTCCCACCAGCAACGCATaGGAGTTCCAGTTTCTTCACATCCGTAGTGACACT +
Preference number: 3 (lower is better)
Translates to: VAAPFHIPTSNA*EFQFLHIRSDT
Trigger: AGTGTCACTACGGATGTGAAGAAACTGGAACTCTCATGCGTTGCTGGTGGGAATGTGAAATGGTGCAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000532689.6
3UTR-3UTR CAA 90 bp GTCTGCGGAATTCCTGTCCATACTCATGTATCCACTTGTTGGCCACCCACTTATTCGAACCTGAGACTGTaGAGATGTCCTGTTCCCAAC +
Preference number: 3 (lower is better)
Translates to: VCGIPVHTHVSTCWPPTYSNLRL*RCPVPN
Trigger: GTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGA...ATAAGTGGGTGGCCAACAAGTGGATACATGAGTATGGACAGGAATTCCGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525968.1
3UTR GCA 72 bp AAAAATCCTTATATAATGTACCACTCATCTGGGATATaGTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGC +
Preference number: 3 (lower is better)
Translates to: KNPYIMYHSSGI*FWEGDTPCLGC
Trigger: GCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR-3UTR CAA 90 bp AATCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCTCATTGCCACTTCTaGGTCCCTGTGGTCAAGGTT +
Preference number: 3 (lower is better)
Translates to: NPYIMYHSSGICFWEGDTPHCHF*VPVVKV
Trigger: AACCTTGACCACAGGGACCAAGAAGTGGCAATGAGG...AGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR-3UTR CAA 90 bp GACAGTTCTATGTTTATCTTTCTGAGAAATCACCAATCTGTTTTCCACAGTGGCAAGATGCCCCATGCATaGGCAGAGCTACCCGTGGCC +
Preference number: 3 (lower is better)
Translates to: DSSMFIFLRNHQSVFHSGKMPHA*AELPVA
Trigger: GGCCACGGGTAGCTCTGCCAATGCATGGGGCATCTT...GCCACTGTGGAAAACAGATTGGTGATTTCTCAGAAAGATAAACATAGAACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR-3UTR CAA 90 bp AAATCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCGAACCTGAGACTGTaGAGATGTCCTGTTCCCAAC +
Preference number: 3 (lower is better)
Translates to: KSLYNVPLIWDMLLGGGHSNLRL*RCPVPN
Trigger: GTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGA...GTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR GCA 72 bp GTATCCATCCTAGGAAGTGTGAAGTGGTTCCTTATTTaGATTTCAAGACCCAGCTTTTGGCTCCTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: VSILGSVKWFLI*ISRPSFWLLAS
Trigger: AGAAGCCAGGAGCCAAAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTCACACTTCCTAGGATGGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000532689.6
3UTR GCA 72 bp TTTCTGAGAAATCACCAATCTGTTTTCCACAGTGGCTaGACCATTTCACATTCCCACCAGCAACGCATGAGA +
Preference number: 3 (lower is better)
Translates to: FLRNHQSVFHSG*TISHSHQQRMR
Trigger: TCTCATGCGTTGCTGGTGGGAATGTGAAATGGTGCAGCCACTGTGGAAAACAGATTGGTGATTTCTCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000532689.6
3UTR TCA 72 bp CCATGGTTCTGCAAGTTCTCTAATTTTCTGAGCCTCTaGGTCACTGACGAAGTCATGGTAGAGAGCAATGTA +
Preference number: 3 (lower is better)
Translates to: PWFCKFSNFLSL*VTDEVMVESNV
Trigger: TACATTGCTCTCTACCATGACTTCGTCAGTGACTCAGAGGCTCAGAAAATTAGAGAACTTGCAGAACCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
3UTR CCA 72 bp TATCTTTCTGAGAAATCACCAATCTGTTTTCCACAGTaGCTGCACCATTTCACATTCCCACCAGCAACGCAT +
Preference number: 3 (lower is better)
Translates to: YLSEKSPICFPQ*LHHFTFPPATH
Trigger: ATGCGTTGCTGGTGGGAATGTGAAATGGTGCAGCCACTGTGGAAAACAGATTGGTGATTTCTCAGAAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000532689.6
3UTR TCA 72 bp CAGATACATACCTGGGAGTGGAATAACTGGGTCAGATaGCAGTTCTATGTTTATCTTTCTGAGAAATCACCA +
Preference number: 3 (lower is better)
Translates to: QIHTWEWNNWVR*QFYVYLSEKSP
Trigger: TGGTGATTTCTCAGAAAGATAAACATAGAACTGTCATCTGACCCAGTTATTCCACTCCCAGGTATGTATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532689.6
3UTR TCA 72 bp GTCTTCTTAATCTGGGAGTGGAATAACTGGGTCAGATaGCAGTTCTATGTTTATCTTTCTGAGAAATCACCA +
Preference number: 3 (lower is better)
Translates to: VFLIWEWNNWVR*QFYVYLSEKSP
Trigger: TGGTGATTTCTCAGAAAGATAAACATAGAACTGTCATCTGACCCAGTTATTCCACTCCCAGATTAAGAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp CAGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGTGGTCGGGCGCGCGCCACGCTaGTCAGCGCCGAGAACGTGT +
Preference number: 4 (lower is better)
Translates to: QASPSCRCPHCHFLVPVVGRAPR*SAPRTC
Trigger: ACACGTTCTCGGCGCTGACCAGCGTGGCGCGCGCCC...GACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp CTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCAGAGCCGCAGCCCTTTCTaGGTCTCCTGTCCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: LIWDMLLGGGHSLLGLQQSRSPF*VSCPER
Trigger: GCGCTCGGGACAGGAGACCCAGAAAGGGCTGCGGCT...CTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp CAGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGTGGTCGGACATCAAGGCCTGTaGGGGCAGCAATGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: QASPSCRCPHCHFLVPVVGHQGL*GQQCGG
Trigger: ACCACCGCATTGCTGCCCTCACAGGCCTTGATGTCC...GACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000427714.2
CDS-3UTR TCA 90 bp CTGGGAGTCAGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGTGCATCCTACTCTaGCTTCCGTGGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LGVRLAPPAGVLIATSWSLCILL*LPWLGQ
Trigger: CTGCCCCAGCCACGGAAGTCAGAGTAGGATGCACAG...GGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTGACTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp CTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCAGCAGGCTAGCCCCTCCTaGAGGTGTCCTCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: LIWDMLLGGGHSLLGLQQQASPS*RCPHCH
Trigger: GTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTG...CTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp ATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCAGAAGGAGGGGGACACTCCCTaGTTGGGCTGCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: IWDMLLGGGHSLLGLQQKEGDTP*LGCSRR
Trigger: CCTTCTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTC...CTTCTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp CTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCAGGCCTCAGCTACCACGTaGTTGGGGCTCTCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: LIWDMLLGGGHSLLGLQQASATT*LGLSAK
Trigger: CTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGC...CTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp GGAGTCAGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGGGGACACTCCCTGCTTaGGCTGCAGCAGAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: GVRLAPPAGVLIATSWSLGTLPA*AAAEGS
Trigger: ACTGCCTTCTGCTGCAGCCCAAGCAGGGAGTGTCCC...CAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp ATGCCCCATGCATTGGCAGAGCTACCCGTGGCCTGCTGGCCTCTTTGCATGACTGAGCCAGTGACTCTCTaGAAGACACCTCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: MPHALAELPVACWPLCMTEPVTL*KTPRAR
Trigger: CCTGGCCCGAGGTGTCTTTCAGAGAGTCACTGGCTC...AGTCATGCAAAGAGGCCAGCAGGCCACGGGTAGCTCTGCCAATGCATGGGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR TCA 90 bp GCATCAGGGCCCTTGCTGCTCCCTCAAGGTCCTCAAAGGCTGGAAGGTCTTGCTCTGTGCATCCTACTCTaGCTTCCGTGGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASGPLLLPQGPQRLEGLALCILL*LPWLGQ
Trigger: CTGCCCCAGCCACGGAAGTCAGAGTAGGATGCACAG...AGCAAGACCTTCCAGCCTTTGAGGACCTTGAGGGAGCAGCAAGGGCCCTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525968.1
CDS-3UTR GCA 90 bp GGCCTCTGGATGACAGCCTCAGCTACCACGTGGTTGGGGCTCTCTGCCAAGAGCCATCAGGGCCCTTGCTaGTCCCTCAAGGTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: GLWMTASATTWLGLSAKSHQGPC*SLKVLK
Trigger: TTTGAGGACCTTGAGGGAGCAGCAAGGGCCCTGATG...GCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGCTGTCATCCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR GCA 90 bp GGAGTCAGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGCTTCAGGGCTGGAGCTaGAGGGTCTGCGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: GVRLAPPAGVLIATSWSLLQGWS*RVCGIP
Trigger: AGGAATTCCGCAGACCCTGCAGCTCCAGCCCTGAAG...CAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp CTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCAGCTTCAGGGCTGGAGCTaGAGGGTCTGCGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: LIWDMLLGGGHSLLGLQQLQGWS*RVCGIP
Trigger: AGGAATTCCGCAGACCCTGCAGCTCCAGCCCTGAAG...CTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp CAGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGTGGTCCTTCAGGGCTGGAGCTaGAGGGTCTGCGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: QASPSCRCPHCHFLVPVVLQGWS*RVCGIP
Trigger: AGGAATTCCGCAGACCCTGCAGCTCCAGCCCTGAAG...GACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp GCCTCTGATTTGCGAGGCACAGACAAAGCTGACAAGGCCTTCTTCCAGGAGGCTAGCCGCAGCCCTTTCTaGGTCTCCTGTCCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: ASDLRGTDKADKAFFQEASRSPF*VSCPER
Trigger: GCGCTCGGGACAGGAGACCCAGAAAGGGCTGCGGCT...AGCCTCCTGGAAGAAGGCCTTGTCAGCTTTGTCTGTGCCTCGCAAATCAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR TCA 90 bp CAGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGTGGTCCAGCAATGCGGTGGTTaGGGGTCACCAGTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: QASPSCRCPHCHFLVPVVQQCGG*GSPVLG
Trigger: ACCCAAAACTGGTGACCCTCAACCACCGCATTGCTG...GACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000427714.2
CDS-3UTR GCA 90 bp TATCTCCCACCAGGACAGGACAGCCAGCATGAAGTGTGTCACTGTCCCCTTCACCCGCATCAGGGCCCTTaGTGCTCCCTCAAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: YLPPGQDSQHEVCHCPLHPHQGP*CSLKVL
Trigger: GAGGACCTTGAGGGAGCAGCAAGGGCCCTGATGCGG...GTGAAGGGGACAGTGACACACTTCATGCTGGCTGTCCTGTCCTGGTGGGAGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR GCA 90 bp ATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCAGAAGAGCATGTACACGTCCTaGAGCCGCATCAGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: IWDMLLGGGHSLLGLQQKSMYTS*SRIRAL
Trigger: AAGGGCCCTGATGCGGCTGCAGGACGTGTACATGCT...CTTCTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp CAGGGCTGGAGCTGCAGGGTCTGCGGAATTCCTGTCCATACTCATGTATCCACTTTGCCCAGGCTGGAGTaGGGTGGGACCAATCTCGGC +
Preference number: 4 (lower is better)
Translates to: QGWSCRVCGIPVHTHVSTLPRLE*GGTNLG
Trigger: GCCGAGATTGGTCCCACCGCACTCCAGCCTGGGCAA...AGTGGATACATGAGTATGGACAGGAATTCCGCAGACCCTGCAGCTCCAGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp GGAGTCAGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGGCCACCTTGCCAACTTaGAAGCAGTCATCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: GVRLAPPAGVLIATSWSLATLPT*KQSSPV
Trigger: CACAGGGGATGACTGCTTCCAAGTTGGCAAGGTGGC...CAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTGACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp ATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCAGAAGTCTGGGATATGCTTCTaGGAGGGGGACACTCCCTGC +
Preference number: 4 (lower is better)
Translates to: IWDMLLGGGHSLLGLQQKSGICF*EGDTPC
Trigger: GCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGA...CTTCTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp CTGGGAGTCAGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCGAGCCTCTGAGTCACTaGCGAAGTCATGGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: LGVRLAPPAGVLIATSWSEPLSH*RSHGRE
Trigger: CTCTCTACCATGACTTCGTCAGTGACTCAGAGGCTC...GGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTGACTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp CAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGGAGCTGGAGGGGGCTGCTTGGTaGCGTAGCATGGTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: QDSTSFSLPTVQSSGLELEGAAW*RSMVKV
Trigger: CACTTTGACCATGCTACGTCACCAAGCAGCCCCCTC...CAGCTCCAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR TCA 90 bp ATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCAGAAGCCTCTCCCTTGCCTCTaGTTTGCGAGGCACAGACAA +
Preference number: 4 (lower is better)
Translates to: IWDMLLGGGHSLLGLQQKPLPCL*FARHRQ
Trigger: TTGTCTGTGCCTCGCAAATCAGAGGCAAGGGAGAGG...CTTCTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp AGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGTGGTCACATCAGGGCCCTTGCTaGTCCCTCAAGGTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: RLAPPAGVLIATSWSLWSHQGPC*SLKVLK
Trigger: TTTGAGGACCTTGAGGGAGCAGCAAGGGCCCTGATG...TGACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp TGGAAAGCCACAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGCCGCATCAGGGCCCTTaGTGCTCCCTCAAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: WKATGLHQLLSANSSVFRPHQGP*CSLKVL
Trigger: GAGGACCTTGAGGGAGCAGCAAGGGCCCTGATGCGG...CCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTGTGGCTTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR GCA 90 bp CCAGGACAGGACAGCCAGCATGAAGTGTGTCACTGTCCCCTTCACCACTCCTGTAGCATGTACACGTCCTaGAGCCGCATCAGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: PGQDSQHEVCHCPLHHSCSMYTS*SRIRAL
Trigger: AAGGGCCCTGATGCGGCTGCAGGACGTGTACATGCT...ACAGGAGTGGTGAAGGGGACAGTGACACACTTCATGCTGGCTGTCCTGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR GCA 90 bp GGAGTCAGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGTGGAGCTGCAGGGTCTaGGGAATTCCTGTCCATACT +
Preference number: 4 (lower is better)
Translates to: GVRLAPPAGVLIATSWSLWSCRV*GIPVHT
Trigger: AGTATGGACAGGAATTCCGCAGACCCTGCAGCTCCA...CAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp CTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCAGTGGAGCTGCAGGGTCTaGGGAATTCCTGTCCATACT +
Preference number: 4 (lower is better)
Translates to: LIWDMLLGGGHSLLGLQQWSCRV*GIPVHT
Trigger: AGTATGGACAGGAATTCCGCAGACCCTGCAGCTCCA...CTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp GGAGAAAGTCTTAAAGTTCTGGGAGTCAGGCTAGCCCCTCCTGCAGGTGTCCTCCAGGCTAGCCCCTCCTaGAGGTGTCCTCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: GESLKVLGVRLAPPAGVLQASPS*RCPHCH
Trigger: GTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTG...GAGGACACCTGCAGGAGGGGCTAGCCTGACTCCCAGAACTTTAAGACTTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp GACAGCCTCAGCTACCACGTGGTTGGGGCTCTCTGCCAAGAGCCTTTCATATTTGAGGGGGACACTCCCTaGTTGGGCTGCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: DSLSYHVVGALCQEPFIFEGDTP*LGCSRR
Trigger: CCTTCTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTC...AAATATGAAAGGCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525968.1
CDS-3UTR CCA 90 bp TTGCGAGGCACAGACAAAGCTGACAAGGCCTTCTTCCAGGAGGCTGCTCTGCTTGCCTCAGCTACCACGTaGTTGGGGCTCTCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: LRGTDKADKAFFQEAALLASATT*LGLSAK
Trigger: CTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGC...AAGCAGAGCAGCCTCCTGGAAGAAGGCCTTGTCAGCTTTGTCTGTGCCTCGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR CCA 90 bp CTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCAGAGGGCAGCAATGCGGTaGTTGAGGGTCACCAGTTTT +
Preference number: 4 (lower is better)
Translates to: LIWDMLLGGGHSLLGLQQRAAMR*LRVTSF
Trigger: AAAACTGGTGACCCTCAACCACCGCATTGCTGCCCT...CTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000427714.2
CDS-3UTR CCA 90 bp CTGGGAGTCAGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCTCCTACCCCAGCTTTTaGCTCCTGGCTTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LGVRLAPPAGVLIATSWSSYPSF*LLASLE
Trigger: TTCCAGAGAAGCCAGGAGCCAAAAGCTGGGGTAGGA...GGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTGACTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR CAA 72 bp GTTTGTACCCACTTTGGCTGCAAGATGCCCCATGCATaGGCAGAGCTACCCGTGGCCTGCTGGCCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: VCTHFGCKMPHA*AELPVACWPLC
Trigger: GCAAAGAGGCCAGCAGGCCACGGGTAGCTCTGCCAATGCATGGGGCATCTTGCAGCCAAAGTGGGTACAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR TCA 90 bp ACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCAAGCAGTCATCCCCTGTaGGAGAAAAGAGCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: THLGYASGRGTLPAWAAASSHPL*EKRAVW
Trigger: CCAAACGGCTCTTTTCTCTCACAGGGGATGACTGCT...TGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp ATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCACTCCCGAGAGAGGCTaGGGGCACACGAAACATTTC +
Preference number: 4 (lower is better)
Translates to: MYHSSGICFWEGDTPCLGTPERG*GHTKHF
Trigger: GAAATGTTTCGTGTGCCCTCAGCCTCTCTCGGGAGT...GCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp ATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCACAGGACAGCCAGCATaGAGTGTGTCACTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: MYHSSGICFWEGDTPCLGTGQPA*SVSLSP
Trigger: AGGGGACAGTGACACACTTCATGCTGGCTGTCCTGT...GCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp ATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCAGAAGAGGCACAGACAAAGCTaGCAAGGCCTTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: IWDMLLGGGHSLLGLQQKRHRQS*QGLLPG
Trigger: TCCTGGAAGAAGGCCTTGTCAGCTTTGTCTGTGCCT...CTTCTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp GTGTCACTGTCCCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCAAGCATGTACACGTCCTaGAGCCGCATCAGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: VSLSPSPLLCRFHQNSAASMYTS*SRIRAL
Trigger: AAGGGCCCTGATGCGGCTGCAGGACGTGTACATGCT...TGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGGGACAGTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR GCA 90 bp CAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGGAGCTGCACCTGCAGATACTCTaGATAGGGAGGCCGGACATC +
Preference number: 4 (lower is better)
Translates to: QDSTSFSLPTVQSSGLELHLQIL*IGRPDI
Trigger: GATGTCCGGCCTCCCTATGCAGAGTATCTGCAGGTG...CAGCTCCAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR GCA 90 bp CAGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGTGGTCCATAGTGTCCTCCGATaGCATAGTTCACCACCTGCA +
Preference number: 4 (lower is better)
Translates to: QASPSCRCPHCHFLVPVVHSVLR*HSSPPA
Trigger: TGCAGGTGGTGAACTATGGCATCGGAGGACACTATG...GACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000427714.2
CDS-3UTR GCA 90 bp AACCCAGGGTCTGACATAGCCCCTCGTAGGTGTCTCTGGTCTGCAGGTGGGGTATGGAGCTGCAGGGTCTaGGGAATTCCTGTCCATACT +
Preference number: 4 (lower is better)
Translates to: NPGSDIAPRRCLWSAGGVWSCRV*GIPVHT
Trigger: AGTATGGACAGGAATTCCGCAGACCCTGCAGCTCCA...TACCCCACCTGCAGACCAGAGACACCTACGAGGGGCTATGTCAGACCCTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR GCA 90 bp GCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGTGGTCAAGTGCAGGTGTCCTCATTaGCACTTCTTGGTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: ASPSCRCPHCHFLVPVVKCRCPH*HFLVPV
Trigger: CACAGGGACCAAGAAGTGGCAATGAGGACACCTGCA...CTTGACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp CCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCAGCCGCAGCCCTTTCTaGGTCTCCTGTCCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: PYIMYHSSGICFWEGDTPSRSPF*VSCPER
Trigger: GCGCTCGGGACAGGAGACCCAGAAAGGGCTGCGGCT...GGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp ACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGGAGCTGCAGGGTCTGGCCACCTTGCCAACTTaGAAGCAGTCATCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: TSFSLPTVQSSGLELQGLATLPT*KQSSPV
Trigger: CACAGGGGATGACTGCTTCCAAGTTGGCAAGGTGGC...CAGACCCTGCAGCTCCAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CCA 90 bp TCACTGTCCCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATTCGCCTCAGCTACCACGTaGTTGGGGCTCTCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SLSPSPLLCRFHQNSAAFASATT*LGLSAK
Trigger: CTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGC...GAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGGGACAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CCA 90 bp GCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGTGGTCAAGCCTCGTAGGTGTCTCTaGTCTGCAGGTGGGGTATAT +
Preference number: 4 (lower is better)
Translates to: ASPSCRCPHCHFLVPVVKPRRCL*SAGGVY
Trigger: ATATACCCCACCTGCAGACCAGAGACACCTACGAGG...CTTGACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp AAGCCACAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGGGATCTGGTAGAGAGTaGGCTGGGAACCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: KPQDSTSFSLPTVQSSGLGSGRE*AGNPGS
Trigger: AGACCCTGGGTTCCCAGCCCACTCTCTACCAGATCC...CAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTGTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CCA 90 bp CAGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGTGGTCGAGGGTCACCAGTTTTaGGTCAACAGTGTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: QASPSCRCPHCHFLVPVVEGHQF*VNSVLQ
Trigger: CTGAAGGACACTGTTGACCCAAAACTGGTGACCCTC...GACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000427714.2
CDS-3UTR CCA 90 bp GTGTCACTGTCCCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCAGGCTCCTGGCTTCTCTaGAAAGCCACAGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: VSLSPSPLLCRFHQNSAAGSWLL*KATGLH
Trigger: GTGGAGTCCTGTGGCTTTCCAGAGAAGCCAGGAGCC...TGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGGGACAGTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CCA 90 bp TTGCGAGGCACAGACAAAGCTGACAAGGCCTTCTTCCAGGAGGCTGCTCTGCTTTCTGGGATATGCTTCTaGGAGGGGGACACTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LRGTDKADKAFFQEAALLSGICF*EGDTPC
Trigger: GCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGA...AAGCAGAGCAGCCTCCTGGAAGAAGGCCTTGTCAGCTTTGTCTGTGCCTCGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR CCA 90 bp TCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATTCCTAACCACAGGCTGGCAGAGCTACCCGTaGCCTGCTGGCCTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: SPLLCRFHQNSAAFLTTGWQSYP*PAGLFA
Trigger: TGCAAAGAGGCCAGCAGGCCACGGGTAGCTCTGCCA...GCCTGTGGTTAGGAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
3UTR CAA 72 bp CGGACATCAAGGCCTGTGAGGGCAGCAATGCGGTGGTaGAGGGTCACCAGTTTTGGGTCAACAGTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: RTSRPVRAAMRW*RVTSFGSTVSF
Trigger: GAAGGACACTGTTGACCCAAAACTGGTGACCCTCAACCACCGCATTGCTGCCCTCACAGGCCTTGATGTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR TCA 90 bp CTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCAGAGCCACAGGGGTTGTTaGATCCTCATGCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: LIWDMLLGGGHSLLGLQQSHRGC*ILMQRK
Trigger: CTTTCTTTGCATGAGGATTCAACAACCCCTGTGGCT...CTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp ACTGTCCCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATTCCTATCCTCGGAAGAGACTaGCAGCCTCCTCCAGCCATG +
Preference number: 4 (lower is better)
Translates to: TVPFTTPVQVPPKQCCIPILGRD*QPPPAM
Trigger: CATGGCTGGAGGAGGCTGTCAGTCTCTTCCGAGGAT...AGGAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGGGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR TCA 90 bp CCCCTGGTAACAACCTCTCCCTTGCCTCTGATTTGCGAGGCACAGACAAAGCTGTATTGGGCCTCTGGATaGCAGCCTCAGCTACCACGT +
Preference number: 4 (lower is better)
Translates to: PLVTTSPLPLICEAQTKLYWASG*QPQLPR
Trigger: ACGTGGTAGCTGAGGCTGTCATCCAGAGGCCCAATA...CAGCTTTGTCTGTGCCTCGCAAATCAGAGGCAAGGGAGAGGTTGTTACCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR GCA 90 bp CTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCAGTTCCTCCAGTCAGACTaGAGGCGTTTGATGAGAGTA +
Preference number: 4 (lower is better)
Translates to: LIWDMLLGGGHSLLGLQQFLQSD*RRLMRV
Trigger: TACTCTCATCAAACGCCTGCAGTCTGACTGGAGGAA...CTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp GCCTCTGATTTGCGAGGCACAGACAAAGCTGACAAGGCCTTCTTCCAGGAGGCTCATCAGGGCCCTTGCTaGTCCCTCAAGGTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: ASDLRGTDKADKAFFQEAHQGPC*SLKVLK
Trigger: TTTGAGGACCTTGAGGGAGCAGCAAGGGCCCTGATG...AGCCTCCTGGAAGAAGGCCTTGTCAGCTTTGTCTGTGCCTCGCAAATCAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR GCA 90 bp AGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGTGGTCACATAGTGTCCTCCGATaGCATAGTTCACCACCTGCA +
Preference number: 4 (lower is better)
Translates to: RLAPPAGVLIATSWSLWSHSVLR*HSSPPA
Trigger: TGCAGGTGGTGAACTATGGCATCGGAGGACACTATG...TGACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000427714.2
CDS-3UTR GCA 90 bp ACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCACCTTCACCACTCCTGTaGAGGTTCCACCAAAACAGT +
Preference number: 4 (lower is better)
Translates to: THLGYASGRGTLPAWAAAPSPLL*RFHQNS
Trigger: ACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGG...TGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp GTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCCACCAGCTTCTCTCTaGCAACAGTTCAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: VPLIWDMLLGGGHSLLGLPPASL*QQFSLQ
Trigger: CTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGG...CAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp CTAGACTTGCCTCATCCTCTGTCTTCCACTCTCCGTAAGATCCTCGGAAGAGACCAGGCTAGCCCCTCCTaGAGGTGTCCTCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: LDLPHPLSSTLRKILGRDQASPS*RCPHCH
Trigger: GTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTG...GTCTCTTCCGAGGATCTTACGGAGAGTGGAAGACAGAGGATGAGGCAAGTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525968.1
CDS-3UTR GCA 90 bp GTGTCACTGTCCCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCACTGCAAGATGCCCCATaGATTGGCAGAGCTACCCGT +
Preference number: 4 (lower is better)
Translates to: VSLSPSPLLCRFHQNSAALQDAP*IGRATR
Trigger: ACGGGTAGCTCTGCCAATGCATGGGGCATCTTGCAG...TGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGGGACAGTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp AACCCAGGGTCTGACATAGCCCCTCGTAGGTGTCTCTGGTCTGCAGGTGGGGTACTCGGATGTTCTCACTaGCCTCCAGACTATGTACCA +
Preference number: 4 (lower is better)
Translates to: NPGSDIAPRRCLWSAGGVLGCSH*PPDYVP
Trigger: TGGTACATAGTCTGGAGGCCAGTGAGAACATCCGAG...TACCCCACCTGCAGACCAGAGACACCTACGAGGGGCTATGTCAGACCCTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp TCTCAGTGTCCCCTGGTAACAACCTCTCCCTTGCCTCTGATTTGCGAGGCACAGGCCACCTTGCCAACTTaGAAGCAGTCATCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: SQCPLVTTSPLPLICEAQATLPT*KQSSPV
Trigger: CACAGGGGATGACTGCTTCCAAGTTGGCAAGGTGGC...CTGTGCCTCGCAAATCAGAGGCAAGGGAGAGGTTGTTACCAGGGGACACTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR CCA 90 bp GTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGGAGGGTCACCAGTTTTaGGTCAACAGTGTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VPLIWDMLLGGGHSLLGLEGHQF*VNSVLQ
Trigger: CTGAAGGACACTGTTGACCCAAAACTGGTGACCCTC...CAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000427714.2
CDS-3UTR CCA 90 bp GTAACAACCTCTCCCTTGCCTCTGATTTGCGAGGCACAGACAAAGCTGACAAGGGGGACACTCCCTGCTTaGGCTGCAGCAGAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: VTTSPLPLICEAQTKLTRGTLPA*AAAEGS
Trigger: ACTGCCTTCTGCTGCAGCCCAAGCAGGGAGTGTCCC...CCTTGTCAGCTTTGTCTGTGCCTCGCAAATCAGAGGCAAGGGAGAGGTTGTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR CCA 90 bp CTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCAGAATGTACCACTCATCTaGGATATGCTTCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LIWDMLLGGGHSLLGLQQNVPLI*DMLLGG
Trigger: CCCTCCCAGAAGCATATCCCAGATGAGTGGTACATT...CTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp GTGTCACTGTCCCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCAAGCAGTCATCCCCTGTaGGAGAAAAGAGCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: VSLSPSPLLCRFHQNSAASSHPL*EKRAVW
Trigger: CCAAACGGCTCTTTTCTCTCACAGGGGATGACTGCT...TGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGGGACAGTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR TCA 90 bp GTGTCACTGTCCCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCAGAGCCTCTGAGTCACTaGCGAAGTCATGGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: VSLSPSPLLCRFHQNSAAEPLSH*RSHGRE
Trigger: CTCTCTACCATGACTTCGTCAGTGACTCAGAGGCTC...TGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGGGACAGTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR TCA 90 bp GACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGAGTAGGACATCAAGGCCTGTaGGGGCAGCAATGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: DPLIEPETVEMSCSQQRVGHQGL*GQQCGG
Trigger: ACCACCGCATTGCTGCCCTCACAGGCCTTGATGTCC...TACTCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000427714.2
CDS-3UTR TCA 90 bp TGGTCCCTGTGGTCAAGGTTCAAAGTGCCAAAAGACCCACTGATCGAACCTGAGGAGGGGGCTGCTTGGTaGCGTAGCATGGTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: WSLWSRFKVPKDPLIEPEEGAAW*RSMVKV
Trigger: CACTTTGACCATGCTACGTCACCAAGCAGCCCCCTC...CTCAGGTTCGATCAGTGGGTCTTTTGGCACTTTGAACCTTGACCACAGGGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000427714.2
CDS-3UTR TCA 90 bp TGGCTTCTCTGGAAAGCCACAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAACAGGACAGCCAGCATaGAGTGTGTCACTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: WLLWKATGLHQLLSANSSTGQPA*SVSLSP
Trigger: AGGGGACAGTGACACACTTCATGCTGGCTGTCCTGT...TGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTGTGGCTTTCCAGAGAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR TCA 90 bp GGAGAAAGTCTTAAAGTTCTGGGAGTCAGGCTAGCCCCTCCTGCAGGTGTCCTCAGGCACAGACAAAGCTaGCAAGGCCTTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GESLKVLGVRLAPPAGVLRHRQS*QGLLPG
Trigger: TCCTGGAAGAAGGCCTTGTCAGCTTTGTCTGTGCCT...GAGGACACCTGCAGGAGGGGCTAGCCTGACTCCCAGAACTTTAAGACTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp CCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCCTGTGCATCCTACTCTaGCTTCCGTGGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PYIMYHSSGICFWEGDTPLCILL*LPWLGQ
Trigger: CTGCCCCAGCCACGGAAGTCAGAGTAGGATGCACAG...GGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp GGCCTCTGGATGACAGCCTCAGCTACCACGTGGTTGGGGCTCTCTGCCAAGAGCTTTGATGAGAGTAAATaGAAGCAGAGGGTTAGCCAC +
Preference number: 4 (lower is better)
Translates to: GLWMTASATTWLGLSAKSFDESK*KQRVSH
Trigger: GTGGCTAACCCTCTGCTTGCATTTACTCTCATCAAA...GCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGCTGTCATCCAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR GCA 90 bp TGGAAAGCCACAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGCATCAGGGCCCTTGCTaGTCCCTCAAGGTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: WKATGLHQLLSANSSVFRHQGPC*SLKVLK
Trigger: TTTGAGGACCTTGAGGGAGCAGCAAGGGCCCTGATG...CCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTGTGGCTTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR GCA 90 bp TCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCCGCATCAGGGCCCTTaGTGCTCCCTCAAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SLYNVPLIWDMLLGGGHSPHQGP*CSLKVL
Trigger: GAGGACCTTGAGGGAGCAGCAAGGGCCCTGATGCGG...GGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp TTGCCTCTGATTTGCGAGGCACAGACAAAGCTGACAAGGCCTTCTTCCAGGAGGCACCTGCAGATACTCTaGATAGGGAGGCCGGACATC +
Preference number: 4 (lower is better)
Translates to: LPLICEAQTKLTRPSSRRHLQIL*IGRPDI
Trigger: GATGTCCGGCCTCCCTATGCAGAGTATCTGCAGGTG...CCTCCTGGAAGAAGGCCTTGTCAGCTTTGTCTGTGCCTCGCAAATCAGAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331597.9
CDS-3UTR GCA 90 bp AGCAGAAGGCAGTGGGGAGAAAGTCTTAAAGTTCTGGGAGTCAGGCTAGCCCCTCACCTGCAGATACTCTaGATAGGGAGGCCGGACATC +
Preference number: 4 (lower is better)
Translates to: SRRQWGESLKVLGVRLAPHLQIL*IGRPDI
Trigger: GATGTCCGGCCTCCCTATGCAGAGTATCTGCAGGTG...AGGGGCTAGCCTGACTCCCAGAACTTTAAGACTTTCTCCCCACTGCCTTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000427714.2
CDS-3UTR GCA 90 bp CCAGGACAGGACAGCCAGCATGAAGTGTGTCACTGTCCCCTTCACCACTCCTGTCCACCAGCTTCTCTCTaGCAACAGTTCAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: PGQDSQHEVCHCPLHHSCPPASL*QQFSLQ
Trigger: CTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGG...ACAGGAGTGGTGAAGGGGACAGTGACACACTTCATGCTGGCTGTCCTGTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR GCA 90 bp GTGTCACTGTCCCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCAACTTTGGCTGCAAGATaGCCCATGCATTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VSLSPSPLLCRFHQNSAATLAAR*PMHWQS
Trigger: GCTCTGCCAATGCATGGGGCATCTTGCAGCCAAAGT...TGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGGGACAGTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR GCA 90 bp CCAGGACAGGACAGCCAGCATGAAGTGTGTCACTGTCCCCTTCACCACTCCTGTTGTACCCACTTTGGCTaGAAGATGCCCCATGCATTG +
Preference number: 4 (lower is better)
Translates to: PGQDSQHEVCHCPLHHSCCTHFG*KMPHAL
Trigger: CAATGCATGGGGCATCTTGCAGCCAAAGTGGGTACA...ACAGGAGTGGTGAAGGGGACAGTGACACACTTCATGCTGGCTGTCCTGTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR GCA 90 bp ACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGGAGCTGCAGGGTCTGCTTGGCCTCCCAGAGTaGGAAGATTATAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: TSFSLPTVQSSGLELQGLLGLPE*EDYRCE
Trigger: CTCACACCTATAATCTTCGCACTCTGGGAGGCCAAG...CAGACCCTGCAGCTCCAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp ATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCAAGGTCCTCAAAGGCTaGAAGGTCTTGCTCCACCTT +
Preference number: 4 (lower is better)
Translates to: MYHSSGICFWEGDTPCLGKVLKG*KVLLHL
Trigger: AAGGTGGAGCAAGACCTTCCAGCCTTTGAGGACCTT...GCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp CCCCTGGTAACAACCTCTCCCTTGCCTCTGATTTGCGAGGCACAGACAAAGCTGGGTATATTGGGCCTCTaGATGACAGCCTCAGCTACC +
Preference number: 4 (lower is better)
Translates to: PLVTTSPLPLICEAQTKLGILGL*MTASAT
Trigger: GGTAGCTGAGGCTGTCATCCAGAGGCCCAATATACC...CAGCTTTGTCTGTGCCTCGCAAATCAGAGGCAAGGGAGAGGTTGTTACCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR CCA 90 bp TGGGGAGAAAGTCTTAAAGTTCTGGGAGTCAGGCTAGCCCCTCCTGCAGGTGTCGGTATATTGGGCCTCTaGATGACAGCCTCAGCTACC +
Preference number: 4 (lower is better)
Translates to: WGESLKVLGVRLAPPAGVGILGL*MTASAT
Trigger: GGTAGCTGAGGCTGTCATCCAGAGGCCCAATATACC...GACACCTGCAGGAGGGGCTAGCCTGACTCCCAGAACTTTAAGACTTTCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp TATCTCCCACCAGGACAGGACAGCCAGCATGAAGTGTGTCACTGTCCCCTTCACCCTCGTAGGTGTCTCTaGTCTGCAGGTGGGGTATAT +
Preference number: 4 (lower is better)
Translates to: YLPPGQDSQHEVCHCPLHPRRCL*SAGGVY
Trigger: ATATACCCCACCTGCAGACCAGAGACACCTACGAGG...GTGAAGGGGACAGTGACACACTTCATGCTGGCTGTCCTGTCCTGGTGGGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CCA 90 bp AAGCCACAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGTCCTACCCCAGCTTTTaGCTCCTGGCTTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: KPQDSTSFSLPTVQSSGLSYPSF*LLASLE
Trigger: TTCCAGAGAAGCCAGGAGCCAAAAGCTGGGGTAGGA...CAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTGTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525968.1
CDS-3UTR CCA 90 bp AGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGTGGTCATCTGACTTCCGTGGCTaGGGCAGATCAAATGTACAT +
Preference number: 4 (lower is better)
Translates to: RLAPPAGVLIATSWSLWSSDFRG*GRSNVH
Trigger: ATGTACATTTGATCTGCCCCAGCCACGGAAGTCAGA...TGACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR CAA 72 bp GTGTCCCCTGGTAACAACCTCTCCCTTGCCTCTGATTaGCGAGGCACAGACAAAGCTGACAAGGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VSPGNNLSLASD*RGTDKADKAFF
Trigger: GAAGAAGGCCTTGTCAGCTTTGTCTGTGCCTCGCAAATCAGAGGCAAGGGAGAGGTTGTTACCAGGGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
3UTR CAA 72 bp TTGGGCCTCTGGATGACAGCCTCAGCTACCACGTGGTaGGGGCTCTCTGCCAAGAGCCTTTCATATTTCAAG +
Preference number: 4 (lower is better)
Translates to: LGLWMTASATTW*GLSAKSLSYFK
Trigger: CTTGAAATATGAAAGGCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGCTGTCATCCAGAGGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR TCA 90 bp TCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCGAGCCAGTGACTCTCTaGAAGACACCTCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SLYNVPLIWDMLLGGGHSEPVTL*KTPRAR
Trigger: CCTGGCCCGAGGTGTCTTTCAGAGAGTCACTGGCTC...GGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp AGGTTCAAAGTGCCAAAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCGAGCCAGTGACTCTCTaGAAGACACCTCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RFKVPKDPLIEPETVEMSEPVTL*KTPRAR
Trigger: CCTGGCCCGAGGTGTCTTTCAGAGAGTCACTGGCTC...GGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCACTTTGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp GTCTGCGGAATTCCTGTCCATACTCATGTATCCACTTGTTGGCCACCCACTTATGAGCCAGTGACTCTCTaGAAGACACCTCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VCGIPVHTHVSTCWPPTYEPVTL*KTPRAR
Trigger: CCTGGCCCGAGGTGTCTTTCAGAGAGTCACTGGCTC...ATAAGTGGGTGGCCAACAAGTGGATACATGAGTATGGACAGGAATTCCGCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR TCA 90 bp ACTGTGCATCCTACTCTGACTTCCGTGGCTGGGGCAGATCAAATGTACATTCTCATCCTCGGAAGAGACTaGCAGCCTCCTCCAGCCATG +
Preference number: 4 (lower is better)
Translates to: TVHPTLTSVAGADQMYILILGRD*QPPPAM
Trigger: CATGGCTGGAGGAGGCTGTCAGTCTCTTCCGAGGAT...GAGAATGTACATTTGATCTGCCCCAGCCACGGAAGTCAGAGTAGGATGCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR TCA 90 bp AGCAGAAGGCAGTGGGGAGAAAGTCTTAAAGTTCTGGGAGTCAGGCTAGCCCCTGAGCCTCTGAGTCACTaGCGAAGTCATGGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: SRRQWGESLKVLGVRLAPEPLSH*RSHGRE
Trigger: CTCTCTACCATGACTTCGTCAGTGACTCAGAGGCTC...AGGGGCTAGCCTGACTCCCAGAACTTTAAGACTTTCTCCCCACTGCCTTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp GCATCAGGGCCCTTGCTGCTCCCTCAAGGTCCTCAAAGGCTGGAAGGTCTTGCTAGTTCTCTAATTTTCTaGGCCTCTGAGTCACTGACG +
Preference number: 4 (lower is better)
Translates to: ASGPLLLPQGPQRLEGLASSLIF*ASESLT
Trigger: CGTCAGTGACTCAGAGGCTCAGAAAATTAGAGAACT...AGCAAGACCTTCCAGCCTTTGAGGACCTTGAGGGAGCAGCAAGGGCCCTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525968.1
CDS-3UTR TCA 90 bp TCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATTCCTAACCACAGGCAGGCACAGACAAAGCTaGCAAGGCCTTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SPLLCRFHQNSAAFLTTGRHRQS*QGLLPG
Trigger: TCCTGGAAGAAGGCCTTGTCAGCTTTGTCTGTGCCT...GCCTGTGGTTAGGAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525968.1
CDS-3UTR TCA 90 bp CAGGGCTGGAGCTGCAGGGTCTGCGGAATTCCTGTCCATACTCATGTATCCACTGCTGGCCTCTTTGCATaGCTCTCAATGCATCTCAGA +
Preference number: 4 (lower is better)
Translates to: QGWSCRVCGIPVHTHVSTAGLFA*LSMHLR
Trigger: TCTGAGATGCATTGAGAGTCATGCAAAGAGGCCAGC...AGTGGATACATGAGTATGGACAGGAATTCCGCAGACCCTGCAGCTCCAGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR GCA 90 bp GGAGTCAGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGTTTGATGAGAGTAAATaGAAGCAGAGGGTTAGCCAC +
Preference number: 4 (lower is better)
Translates to: GVRLAPPAGVLIATSWSLFDESK*KQRVSH
Trigger: GTGGCTAACCCTCTGCTTGCATTTACTCTCATCAAA...CAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp CCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCAGCATGTACACGTCCTaGAGCCGCATCAGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: PYIMYHSSGICFWEGDTPSMYTS*SRIRAL
Trigger: AAGGGCCCTGATGCGGCTGCAGGACGTGTACATGCT...GGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp CCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATTCCTAACCACTGGAGCTGCAGGGTCTaGGGAATTCCTGTCCATACT +
Preference number: 4 (lower is better)
Translates to: PFTTPVQVPPKQCCIPNHWSCRV*GIPVHT
Trigger: AGTATGGACAGGAATTCCGCAGACCCTGCAGCTCCA...GTGGTTAGGAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR GCA 90 bp AGCAGAAGGCAGTGGGGAGAAAGTCTTAAAGTTCTGGGAGTCAGGCTAGCCCCTTGCAGGTGTCCTCATTaGCACTTCTTGGTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: SRRQWGESLKVLGVRLAPCRCPH*HFLVPV
Trigger: CACAGGGACCAAGAAGTGGCAATGAGGACACCTGCA...AGGGGCTAGCCTGACTCCCAGAACTTTAAGACTTTCTCCCCACTGCCTTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp CCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATTCCTAACCACTGCAGGTGTCCTCATTaGCACTTCTTGGTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: PFTTPVQVPPKQCCIPNHCRCPH*HFLVPV
Trigger: CACAGGGACCAAGAAGTGGCAATGAGGACACCTGCA...GTGGTTAGGAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525968.1
CDS-3UTR GCA 90 bp CTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGAGTATCTGAAGAGGGGGACACTCCCTaGTTGGGCTGCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LIEPETVEMSCSQQRVSEEGDTP*LGCSRR
Trigger: CCTTCTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTC...TTCAGATACTCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp TTGCCTCTGATTTGCGAGGCACAGACAAAGCTGACAAGGCCTTCTTCCAGGAGGCACTCATCTGGGATATaGTTCTGGGAGGGGGACACT +
Preference number: 4 (lower is better)
Translates to: LPLICEAQTKLTRPSSRRHSSGI*FWEGDT
Trigger: AGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTG...CCTCCTGGAAGAAGGCCTTGTCAGCTTTGTCTGTGCCTCGCAAATCAGAGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR CCA 90 bp TGGGGAGAAAGTCTTAAAGTTCTGGGAGTCAGGCTAGCCCCTCCTGCAGGTGTCCTCGGATGTTCTCACTaGCCTCCAGACTATGTACCA +
Preference number: 4 (lower is better)
Translates to: WGESLKVLGVRLAPPAGVLGCSH*PPDYVP
Trigger: TGGTACATAGTCTGGAGGCCAGTGAGAACATCCGAG...GACACCTGCAGGAGGGGCTAGCCTGACTCCCAGAACTTTAAGACTTTCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000427714.2
CDS-3UTR CCA 90 bp CCCCTGGTAACAACCTCTCCCTTGCCTCTGATTTGCGAGGCACAGACAAAGCTGAAGGTCCTCAAAGGCTaGAAGGTCTTGCTCCACCTT +
Preference number: 4 (lower is better)
Translates to: PLVTTSPLPLICEAQTKLKVLKG*KVLLHL
Trigger: AAGGTGGAGCAAGACCTTCCAGCCTTTGAGGACCTT...CAGCTTTGTCTGTGCCTCGCAAATCAGAGGCAAGGGAGAGGTTGTTACCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR CCA 90 bp GTGTCACTGTCCCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCAAAGGTCCTCAAAGGCTaGAAGGTCTTGCTCCACCTT +
Preference number: 4 (lower is better)
Translates to: VSLSPSPLLCRFHQNSAAKVLKG*KVLLHL
Trigger: AAGGTGGAGCAAGACCTTCCAGCCTTTGAGGACCTT...TGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGGGACAGTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CCA 90 bp ATGTATCCACTTGTTGGCCACCCACTTATCTCCCACCAGGACAGGACAGCCAGCCCTCCAGCCATGGAATaGCATGGTAATAATCCCCCA +
Preference number: 4 (lower is better)
Translates to: MYPLVGHPLISHQDRTASPPAME*HGNNPP
Trigger: TGGGGGATTATTACCATGCCATTCCATGGCTGGAGG...GCTGGCTGTCCTGTCCTGGTGGGAGATAAGTGGGTGGCCAACAAGTGGATACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CCA 90 bp TTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGGCCTCAGCTACCACGTaGTTGGGGCTCTCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: LYNVPLIWDMLLGGGHSLASATT*LGLSAK
Trigger: CTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGC...CAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp ACTGTCCCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATTCCTGGTATATTGGGCCTCTaGATGACAGCCTCAGCTACC +
Preference number: 4 (lower is better)
Translates to: TVPFTTPVQVPPKQCCIPGILGL*MTASAT
Trigger: GGTAGCTGAGGCTGTCATCCAGAGGCCCAATATACC...AGGAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGGGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CCA 90 bp GTGCATCCTACTCTGACTTCCGTGGCTGGGGCAGATCAAATGTACATTCTCAGTGGATCTGGTAGAGAGTaGGCTGGGAACCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: VHPTLTSVAGADQMYILSGSGRE*AGNPGS
Trigger: AGACCCTGGGTTCCCAGCCCACTCTCTACCAGATCC...ACTGAGAATGTACATTTGATCTGCCCCAGCCACGGAAGTCAGAGTAGGATGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR CCA 90 bp TATCTCCCACCAGGACAGGACAGCCAGCATGAAGTGTGTCACTGTCCCCTTCACGAGGGTCACCAGTTTTaGGTCAACAGTGTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: YLPPGQDSQHEVCHCPLHEGHQF*VNSVLQ
Trigger: CTGAAGGACACTGTTGACCCAAAACTGGTGACCCTC...GTGAAGGGGACAGTGACACACTTCATGCTGGCTGTCCTGTCCTGGTGGGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp TATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGCTCCTGGCTTCTCTaGAAAGCCACAGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: YNVPLIWDMLLGGGHSLLGSWLL*KATGLH
Trigger: GTGGAGTCCTGTGGCTTTCCAGAGAAGCCAGGAGCC...AAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp TATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTTCTGGGATATGCTTCTaGGAGGGGGACACTCCCTGC +
Preference number: 4 (lower is better)
Translates to: YNVPLIWDMLLGGGHSLLSGICF*EGDTPC
Trigger: GCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGA...AAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp TTGCGAGGCACAGACAAAGCTGACAAGGCCTTCTTCCAGGAGGCTGCTCTGCTTAGCCACAGGGGTTGTTaGATCCTCATGCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: LRGTDKADKAFFQEAALLSHRGC*ILMQRK
Trigger: CTTTCTTTGCATGAGGATTCAACAACCCCTGTGGCT...AAGCAGAGCAGCCTCCTGGAAGAAGGCCTTGTCAGCTTTGTCTGTGCCTCGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR TCA 90 bp GCCTCTGATTTGCGAGGCACAGACAAAGCTGACAAGGCCTTCTTCCAGGAGGCTAGCCACAGGGGTTGTTaGATCCTCATGCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: ASDLRGTDKADKAFFQEASHRGC*ILMQRK
Trigger: CTTTCTTTGCATGAGGATTCAACAACCCCTGTGGCT...AGCCTCCTGGAAGAAGGCCTTGTCAGCTTTGTCTGTGCCTCGCAAATCAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR TCA 90 bp TGGTCCCTGTGGTCAAGGTTCAAAGTGCCAAAAGACCCACTGATCGAACCTGAGCCAGGCCTTTCACATTaGGCATGTACACGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: WSLWSRFKVPKDPLIEPEPGLSH*ACTRPA
Trigger: TGCAGGACGTGTACATGCTCAATGTGAAAGGCCTGG...CTCAGGTTCGATCAGTGGGTCTTTTGGCACTTTGAACCTTGACCACAGGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp AAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGAATCCTCGGAAGAGACTaGCAGCCTCCTCCAGCCATG +
Preference number: 4 (lower is better)
Translates to: KDPLIEPETVEMSCSQQRILGRD*QPPPAM
Trigger: CATGGCTGGAGGAGGCTGTCAGTCTCTTCCGAGGAT...TCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp TATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTTATTGGGCCTCTGGATaGCAGCCTCAGCTACCACGT +
Preference number: 4 (lower is better)
Translates to: YNVPLIWDMLLGGGHSLLYWASG*QPQLPR
Trigger: ACGTGGTAGCTGAGGCTGTCATCCAGAGGCCCAATA...AAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp TGGTCCCTGTGGTCAAGGTTCAAAGTGCCAAAAGACCCACTGATCGAACCTGAGGCCAGGCACTTTTGCTaGTGCGGTACTCCACTTGTA +
Preference number: 4 (lower is better)
Translates to: WSLWSRFKVPKDPLIEPEARHFC*CGTPLV
Trigger: TACAAGTGGAGTACCGCATCAGCAAAAGTGCCTGGC...CTCAGGTTCGATCAGTGGGTCTTTTGGCACTTTGAACCTTGACCACAGGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000427714.2
CDS-3UTR TCA 90 bp GACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGAGTAACAGGACAGCCAGCATaGAGTGTGTCACTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: DPLIEPETVEMSCSQQRVTGQPA*SVSLSP
Trigger: AGGGGACAGTGACACACTTCATGCTGGCTGTCCTGT...TACTCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp GACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGAGTACCTCTCCCTTGCCTCTaGTTTGCGAGGCACAGACAA +
Preference number: 4 (lower is better)
Translates to: DPLIEPETVEMSCSQQRVPLPCL*FARHRQ
Trigger: TTGTCTGTGCCTCGCAAATCAGAGGCAAGGGAGAGG...TACTCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp CAGGGCTGGAGCTGCAGGGTCTGCGGAATTCCTGTCCATACTCATGTATCCACTTCTGGGCAAGTTATCTaGCTTGCCTCAGCTTTAGTC +
Preference number: 4 (lower is better)
Translates to: QGWSCRVCGIPVHTHVSTSGQVI*LASALV
Trigger: GACTAAAGCTGAGGCAAGTCAGATAACTTGCCCAGA...AGTGGATACATGAGTATGGACAGGAATTCCGCAGACCCTGCAGCTCCAGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR GCA 90 bp TCTCAGTGTCCCCTGGTAACAACCTCTCCCTTGCCTCTGATTTGCGAGGCACAGTGTCATAGGCCACCTTaGCAACTTGGAAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: SQCPLVTTSPLPLICEAQCHRPP*QLGSSH
Trigger: ATGACTGCTTCCAAGTTGGCAAGGTGGCCTATGACA...CTGTGCCTCGCAAATCAGAGGCAAGGGAGAGGTTGTTACCAGGGGACACTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR GCA 90 bp AAGCCACAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGGTGGTTGGGGCTCTCTaGCAAGAGCCTTTCATATTT +
Preference number: 4 (lower is better)
Translates to: KPQDSTSFSLPTVQSSGLVVGAL*QEPFIF
Trigger: AAATATGAAAGGCTCTTGGCAGAGAGCCCCAACCAC...CAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTGTGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR GCA 90 bp TGGCTTCTCTGGAAAGCCACAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCACCTTCACCACTCCTGTaGAGGTTCCACCAAAACAGT +
Preference number: 4 (lower is better)
Translates to: WLLWKATGLHQLLSANSSPSPLL*RFHQNS
Trigger: ACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGG...TGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTGTGGCTTTCCAGAGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR GCA 90 bp CTGCGGAATTCCTGTCCATACTCATGTATCCACTTGTTGGCCACCCACTTATCTGAGCTACCCGTGGCCTaGTGGCCTCTTTGCATGACT +
Preference number: 4 (lower is better)
Translates to: LRNSCPYSCIHLLATHLSELPVA*WPLCMT
Trigger: AGTCATGCAAAGAGGCCAGCAGGCCACGGGTAGCTC...AGATAAGTGGGTGGCCAACAAGTGGATACATGAGTATGGACAGGAATTCCGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp CTAGACTTGCCTCATCCTCTGTCTTCCACTCTCCGTAAGATCCTCGGAAGAGACGGTATATTGGGCCTCTaGATGACAGCCTCAGCTACC +
Preference number: 4 (lower is better)
Translates to: LDLPHPLSSTLRKILGRDGILGL*MTASAT
Trigger: GGTAGCTGAGGCTGTCATCCAGAGGCCCAATATACC...GTCTCTTCCGAGGATCTTACGGAGAGTGGAAGACAGAGGATGAGGCAAGTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525968.1
CDS-3UTR CCA 90 bp ATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCGGTAGGCGTTGGAATTaGTCTCATAGGAACAGTAGA +
Preference number: 4 (lower is better)
Translates to: MYHSSGICFWEGDTPCLGGRRWN*SHRNSR
Trigger: TCTACTGTTCCTATGAGACCAATTCCAACGCCTACC...GCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp GACAGCCTCAGCTACCACGTGGTTGGGGCTCTCTGCCAAGAGCCTTTCATATTTGCAGCAGGTAGGCGTTaGAATTGGTCTCATAGGAAC +
Preference number: 4 (lower is better)
Translates to: DSLSYHVVGALCQEPFIFAAGRR*NWSHRN
Trigger: GTTCCTATGAGACCAATTCCAACGCCTACCTGCTGC...AAATATGAAAGGCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CCA 90 bp GTAACAACCTCTCCCTTGCCTCTGATTTGCGAGGCACAGACAAAGCTGACAAGGAGGGCAGCAATGCGGTaGTTGAGGGTCACCAGTTTT +
Preference number: 4 (lower is better)
Translates to: VTTSPLPLICEAQTKLTRRAAMR*LRVTSF
Trigger: AAAACTGGTGACCCTCAACCACCGCATTGCTGCCCT...CCTTGTCAGCTTTGTCTGTGCCTCGCAAATCAGAGGCAAGGGAGAGGTTGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331597.9
CDS-3UTR CCA 90 bp AAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGAGGCTCCTGGCTTCTCTaGAAAGCCACAGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: KDPLIEPETVEMSCSQQRGSWLL*KATGLH
Trigger: GTGGAGTCCTGTGGCTTTCCAGAGAAGCCAGGAGCC...TCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp CCCCTGGTAACAACCTCTCCCTTGCCTCTGATTTGCGAGGCACAGACAAAGCTGACTTCTTGGTCCCTGTaGTCAAGGTTCAAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: PLVTTSPLPLICEAQTKLTSWSL*SRFKVP
Trigger: TGGCACTTTGAACCTTGACCACAGGGACCAAGAAGT...CAGCTTTGTCTGTGCCTCGCAAATCAGAGGCAAGGGAGAGGTTGTTACCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR CCA 90 bp ACAGCCTCAGCTACCACGTGGTTGGGGCTCTCTGCCAAGAGCCTTTCATATTTCCTCATTGCCACTTCTTaGTCCCTGTGGTCAAGGTTC +
Preference number: 4 (lower is better)
Translates to: TASATTWLGLSAKSLSYFLIATS*SLWSRF
Trigger: GAACCTTGACCACAGGGACCAAGAAGTGGCAATGAG...GAAATATGAAAGGCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525968.1
CDS-3UTR CCA 90 bp CTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGAGTATCTGAAGGGACACTCCCTGCTTaGGCTGCAGCAGAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LIEPETVEMSCSQQRVSEGTLPA*AAAEGS
Trigger: ACTGCCTTCTGCTGCAGCCCAAGCAGGGAGTGTCCC...TTCAGATACTCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp TCACTGTCCCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATTCAGCCACAGGGGTTGTTaGATCCTCATGCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: SLSPSPLLCRFHQNSAAFSHRGC*ILMQRK
Trigger: CTTTCTTTGCATGAGGATTCAACAACCCCTGTGGCT...GAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGGGACAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR TCA 90 bp TATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTAGCAGTCATCCCCTGTaGGAGAAAAGAGCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: YNVPLIWDMLLGGGHSLLSSHPL*EKRAVW
Trigger: CCAAACGGCTCTTTTCTCTCACAGGGGATGACTGCT...AAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp TGTACATTCTCAGTGTCCCCTGGTAACAACCTCTCCCTTGCCTCTGATTTGCGAAGCAGTCATCCCCTGTaGGAGAAAAGAGCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: CTFSVSPGNNLSLASDLRSSHPL*EKRAVW
Trigger: CCAAACGGCTCTTTTCTCTCACAGGGGATGACTGCT...TCGCAAATCAGAGGCAAGGGAGAGGTTGTTACCAGGGGACACTGAGAATGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR TCA 90 bp CTGCGGAATTCCTGTCCATACTCATGTATCCACTTGTTGGCCACCCACTTATCTCAGCAATGCGGTGGTTaGGGGTCACCAGTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: LRNSCPYSCIHLLATHLSQQCGG*GSPVLG
Trigger: ACCCAAAACTGGTGACCCTCAACCACCGCATTGCTG...AGATAAGTGGGTGGCCAACAAGTGGATACATGAGTATGGACAGGAATTCCGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR TCA 90 bp TTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCCTCTCCCTTGCCTCTaGTTTGCGAGGCACAGACAA +
Preference number: 4 (lower is better)
Translates to: LYNVPLIWDMLLGGGHSLPLPCL*FARHRQ
Trigger: TTGTCTGTGCCTCGCAAATCAGAGGCAAGGGAGAGG...CAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp TGCCTCATCCTCTGTCTTCCACTCTCCGTAAGATCCTCGGAAGAGACTGACAGCCTTGGTGACTTTTGCTaGTGCGGTACTCCACTTGTA +
Preference number: 4 (lower is better)
Translates to: CLILCLPLSVRSSEETDSLGDFC*CGTPLV
Trigger: TACAAGTGGAGTACCGCATCAGCAAAAGTCACCAAG...GCTGTCAGTCTCTTCCGAGGATCTTACGGAGAGTGGAAGACAGAGGATGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525968.1
CDS-3UTR TCA 90 bp AAGCCACAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGCTCAGAAGGAGATGCTaGATTGTTCTAATGCTCCCA +
Preference number: 4 (lower is better)
Translates to: KPQDSTSFSLPTVQSSGLLRRRC*IVLMLP
Trigger: TGGGAGCATTAGAACAATTCAGCATCTCCTTCTGAG...CAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTGTGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR GCA 90 bp TGGAAAGCCACAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGTGTCATAGGCCACCTTaGCAACTTGGAAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: WKATGLHQLLSANSSVFRCHRPP*QLGSSH
Trigger: ATGACTGCTTCCAAGTTGGCAAGGTGGCCTATGACA...CCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTGTGGCTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR GCA 90 bp CTAGACTTGCCTCATCCTCTGTCTTCCACTCTCCGTAAGATCCTCGGAAGAGACCCACCAGCTTCTCTCTaGCAACAGTTCAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LDLPHPLSSTLRKILGRDPPASL*QQFSLQ
Trigger: CTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGG...GTCTCTTCCGAGGATCTTACGGAGAGTGGAAGACAGAGGATGAGGCAAGTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525968.1
CDS-3UTR CCA 90 bp TATCTTTCTGAGAAATCACCAATCTGTTTTCCACAGTGGCTGCACCATTTCACAAGCCGCAGCCCTTTCTaGGTCTCCTGTCCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: YLSEKSPICFPQWLHHFTSRSPF*VSCPER
Trigger: GCGCTCGGGACAGGAGACCCAGAAAGGGCTGCGGCT...TGTGAAATGGTGCAGCCACTGTGGAAAACAGATTGGTGATTTCTCAGAAAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp TCACTGTCCCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATTCAGCCTCCTCCAGCCATaGAATGGCATGGTAATAATC +
Preference number: 4 (lower is better)
Translates to: SLSPSPLLCRFHQNSAAFSLLQP*NGMVII
Trigger: GATTATTACCATGCCATTCCATGGCTGGAGGAGGCT...GAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGGGACAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CCA 90 bp CAGGGCTGGAGCTGCAGGGTCTGCGGAATTCCTGTCCATACTCATGTATCCACTGGTAGGCGTTGGAATTaGTCTCATAGGAACAGTAGA +
Preference number: 4 (lower is better)
Translates to: QGWSCRVCGIPVHTHVSTGRRWN*SHRNSR
Trigger: TCTACTGTTCCTATGAGACCAATTCCAACGCCTACC...AGTGGATACATGAGTATGGACAGGAATTCCGCAGACCCTGCAGCTCCAGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CCA 90 bp TGGTCCCTGTGGTCAAGGTTCAAAGTGCCAAAAGACCCACTGATCGAACCTGAGGCAGCAGGTAGGCGTTaGAATTGGTCTCATAGGAAC +
Preference number: 4 (lower is better)
Translates to: WSLWSRFKVPKDPLIEPEAAGRR*NWSHRN
Trigger: GTTCCTATGAGACCAATTCCAACGCCTACCTGCTGC...CTCAGGTTCGATCAGTGGGTCTTTTGGCACTTTGAACCTTGACCACAGGGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp ACGAAACATTTCCTGCCCGGAAATAAGCAAAGGCCAAGTGATCCAAGGCATCTTGGCTCCTGGCTTCTCTaGAAAGCCACAGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: TKHFLPGNKQRPSDPRHLGSWLL*KATGLH
Trigger: GTGGAGTCCTGTGGCTTTCCAGAGAAGCCAGGAGCC...AAGATGCCTTGGATCACTTGGCCTTTGCTTATTTCCGGGCAGGAAATGTTTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525968.1
CDS-3UTR CCA 90 bp AGCAGAAGGCAGTGGGGAGAAAGTCTTAAAGTTCTGGGAGTCAGGCTAGCCCCTTCTGACTTCCGTGGCTaGGGCAGATCAAATGTACAT +
Preference number: 4 (lower is better)
Translates to: SRRQWGESLKVLGVRLAPSDFRG*GRSNVH
Trigger: ATGTACATTTGATCTGCCCCAGCCACGGAAGTCAGA...AGGGGCTAGCCTGACTCCCAGAACTTTAAGACTTTCTCCCCACTGCCTTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
3UTR CAA 72 bp CCATCCTCTTATTATCTGGGCCTGTTTGTACCCACTTaGGCTGCAAGATGCCCCATGCATTGGCAGAGCTAC +
Preference number: 4 (lower is better)
Translates to: PSSYYLGLFVPT*AARCPMHWQSY
Trigger: GTAGCTCTGCCAATGCATGGGGCATCTTGCAGCCAAAGTGGGTACAAACAGGCCCAGATAATAAGAGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR TCA 90 bp ATCAAATGTACATTCTCAGTGTCCCCTGGTAACAACCTCTCCCTTGCCTCTGATTATTGGGCCTCTGGATaGCAGCCTCAGCTACCACGT +
Preference number: 4 (lower is better)
Translates to: IKCTFSVSPGNNLSLASDYWASG*QPQLPR
Trigger: ACGTGGTAGCTGAGGCTGTCATCCAGAGGCCCAATA...ATCAGAGGCAAGGGAGAGGTTGTTACCAGGGGACACTGAGAATGTACATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR TCA 90 bp GTGAAGTGGTTCCTTATTTGCATTTCAAGACCCAGCTTTTGGCTCCTGGCTTCTTATTGGGCCTCTGGATaGCAGCCTCAGCTACCACGT +
Preference number: 4 (lower is better)
Translates to: VKWFLICISRPSFWLLASYWASG*QPQLPR
Trigger: ACGTGGTAGCTGAGGCTGTCATCCAGAGGCCCAATA...AGAAGCCAGGAGCCAAAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR TCA 90 bp TGGCTTCTCTGGAAAGCCACAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAAATTTTCTGAGCCTCTaGGTCACTGACGAAGTCATG +
Preference number: 4 (lower is better)
Translates to: WLLWKATGLHQLLSANSSNFLSL*VTDEVM
Trigger: CATGACTTCGTCAGTGACTCAGAGGCTCAGAAAATT...TGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTGTGGCTTTCCAGAGAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR TCA 90 bp AGCAGAAGGCAGTGGGGAGAAAGTCTTAAAGTTCTGGGAGTCAGGCTAGCCCCTAGTTCTCTAATTTTCTaGGCCTCTGAGTCACTGACG +
Preference number: 4 (lower is better)
Translates to: SRRQWGESLKVLGVRLAPSSLIF*ASESLT
Trigger: CGTCAGTGACTCAGAGGCTCAGAAAATTAGAGAACT...AGGGGCTAGCCTGACTCCCAGAACTTTAAGACTTTCTCCCCACTGCCTTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp TGGAAAGCCACAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGAGTTCTCTAATTTTCTaGGCCTCTGAGTCACTGACG +
Preference number: 4 (lower is better)
Translates to: WKATGLHQLLSANSSVFRSSLIF*ASESLT
Trigger: CGTCAGTGACTCAGAGGCTCAGAAAATTAGAGAACT...CCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTGTGGCTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR TCA 90 bp AAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGAGCCAGGCACTTTTGCTaGTGCGGTACTCCACTTGTA +
Preference number: 4 (lower is better)
Translates to: KDPLIEPETVEMSCSQQRARHFC*CGTPLV
Trigger: TACAAGTGGAGTACCGCATCAGCAAAAGTGCCTGGC...TCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000427714.2
CDS-3UTR TCA 90 bp AAATCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACGAGGGGGCTGCTTGGTaGCGTAGCATGGTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: KSLYNVPLIWDMLLGGGHEGAAW*RSMVKV
Trigger: CACTTTGACCATGCTACGTCACCAAGCAGCCCCCTC...GTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000427714.2
CDS-3UTR TCA 90 bp GACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGAGTATGCCAAAAGACCCACTaGTCGAACCTGAGACTGTTG +
Preference number: 4 (lower is better)
Translates to: DPLIEPETVEMSCSQQRVCQKTH*SNLRLL
Trigger: CAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCA...TACTCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp TGTACATTCTCAGTGTCCCCTGGTAACAACCTCTCCCTTGCCTCTGATTTGCGATGCCAAAAGACCCACTaGTCGAACCTGAGACTGTTG +
Preference number: 4 (lower is better)
Translates to: CTFSVSPGNNLSLASDLRCQKTH*SNLRLL
Trigger: CAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCA...TCGCAAATCAGAGGCAAGGGAGAGGTTGTTACCAGGGGACACTGAGAATGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR GCA 90 bp ATGTATCCACTTGTTGGCCACCCACTTATCTCCCACCAGGACAGGACAGCCAGCTTTGATGAGAGTAAATaGAAGCAGAGGGTTAGCCAC +
Preference number: 4 (lower is better)
Translates to: MYPLVGHPLISHQDRTASFDESK*KQRVSH
Trigger: GTGGCTAACCCTCTGCTTGCATTTACTCTCATCAAA...GCTGGCTGTCCTGTCCTGGTGGGAGATAAGTGGGTGGCCAACAAGTGGATACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR GCA 90 bp TATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTCCTTCACCACTCCTGTaGAGGTTCCACCAAAACAGT +
Preference number: 4 (lower is better)
Translates to: YNVPLIWDMLLGGGHSLLPSPLL*RFHQNS
Trigger: ACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGG...AAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp AGGAAGTGTGAAGTGGTTCCTTATTTGCATTTCAAGACCCAGCTTTTGGCTCCTCTTCAGGGCTGGAGCTaGAGGGTCTGCGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: RKCEVVPYLHFKTQLLAPLQGWS*RVCGIP
Trigger: AGGAATTCCGCAGACCCTGCAGCTCCAGCCCTGAAG...AGGAGCCAAAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTCACACTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000532689.6
CDS-3UTR GCA 90 bp GCTATGACCATGGGTGTACAGCTATCATTCCATTCTTTCAGATACATACCTGGGCTTCAGGGCTGGAGCTaGAGGGTCTGCGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: AMTMGVQLSFHSFRYIPGLQGWS*RVCGIP
Trigger: AGGAATTCCGCAGACCCTGCAGCTCCAGCCCTGAAG...CCCAGGTATGTATCTGAAAGAATGGAATGATAGCTGTACACCCATGGTCATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532689.6
CDS-3UTR GCA 90 bp TTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCACTCATCTGGGATATaGTTCTGGGAGGGGGACACT +
Preference number: 4 (lower is better)
Translates to: LYNVPLIWDMLLGGGHSLHSSGI*FWEGDT
Trigger: AGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTG...CAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp AAAGTGCCAAAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCACTCATCTGGGATATaGTTCTGGGAGGGGGACACT +
Preference number: 4 (lower is better)
Translates to: KVPKDPLIEPETVEMSCSHSSGI*FWEGDT
Trigger: AGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTG...GGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp GCATCCTACTCTGACTTCCGTGGCTGGGGCAGATCAAATGTACATTCTCAGTGTCCTCCAGCCATGGAATaGCATGGTAATAATCCCCCA +
Preference number: 4 (lower is better)
Translates to: ASYSDFRGWGRSNVHSQCPPAME*HGNNPP
Trigger: TGGGGGATTATTACCATGCCATTCCATGGCTGGAGG...ACACTGAGAATGTACATTTGATCTGCCCCAGCCACGGAAGTCAGAGTAGGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR CCA 90 bp TATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTCCTCCAGCCATGGAATaGCATGGTAATAATCCCCCA +
Preference number: 4 (lower is better)
Translates to: YNVPLIWDMLLGGGHSLLPPAME*HGNNPP
Trigger: TGGGGGATTATTACCATGCCATTCCATGGCTGGAGG...AAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp TGGTCCCTGTGGTCAAGGTTCAAAGTGCCAAAAGACCCACTGATCGAACCTGAGAGCCTCCTCCAGCCATaGAATGGCATGGTAATAATC +
Preference number: 4 (lower is better)
Translates to: WSLWSRFKVPKDPLIEPESLLQP*NGMVII
Trigger: GATTATTACCATGCCATTCCATGGCTGGAGGAGGCT...CTCAGGTTCGATCAGTGGGTCTTTTGGCACTTTGAACCTTGACCACAGGGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp GTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGATTTCAAGACATTCCTaGCCATCCTCTTATTATCTG +
Preference number: 4 (lower is better)
Translates to: VPLIWDMLLGGGHSLLGLISRHS*PSSYYL
Trigger: CAGATAATAAGAGGATGGCCAGGAATGTCTTGAAAT...CAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp AATGTACATTCTCAGTGTCCCCTGGTAACAACCTCTCCCTTGCCTCTGATTTGCCCTCGTAGGTGTCTCTaGTCTGCAGGTGGGGTATAT +
Preference number: 4 (lower is better)
Translates to: NVHSQCPLVTTSPLPLICPRRCL*SAGGVY
Trigger: ATATACCCCACCTGCAGACCAGAGACACCTACGAGG...GCAAATCAGAGGCAAGGGAGAGGTTGTTACCAGGGGACACTGAGAATGTACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR CCA 90 bp AGGAAGTGTGAAGTGGTTCCTTATTTGCATTTCAAGACCCAGCTTTTGGCTCCTGGATCTGGTAGAGAGTaGGCTGGGAACCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RKCEVVPYLHFKTQLLAPGSGRE*AGNPGS
Trigger: AGACCCTGGGTTCCCAGCCCACTCTCTACCAGATCC...AGGAGCCAAAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTCACACTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp TTGCCTCTGATTTGCGAGGCACAGACAAAGCTGACAAGGCCTTCTTCCAGGAGGGGTAGGCGTTGGAATTaGTCTCATAGGAACAGTAGA +
Preference number: 4 (lower is better)
Translates to: LPLICEAQTKLTRPSSRRGRRWN*SHRNSR
Trigger: TCTACTGTTCCTATGAGACCAATTCCAACGCCTACC...CCTCCTGGAAGAAGGCCTTGTCAGCTTTGTCTGTGCCTCGCAAATCAGAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR CCA 90 bp GTAACAACCTCTCCCTTGCCTCTGATTTGCGAGGCACAGACAAAGCTGACAAGGCATGTATCCACTTGTTaGCCACCCACTTATCTCCCA +
Preference number: 4 (lower is better)
Translates to: VTTSPLPLICEAQTKLTRHVSTC*PPTYLP
Trigger: TGGGAGATAAGTGGGTGGCCAACAAGTGGATACATG...CCTTGTCAGCTTTGTCTGTGCCTCGCAAATCAGAGGCAAGGGAGAGGTTGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR CCA 90 bp CCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCCTCATTGCCACTTCTTaGTCCCTGTGGTCAAGGTTC +
Preference number: 4 (lower is better)
Translates to: PYIMYHSSGICFWEGDTPLIATS*SLWSRF
Trigger: GAACCTTGACCACAGGGACCAAGAAGTGGCAATGAG...GGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp AAGCCACAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGCATCCTCTTATTATCTaGGCCTGTTTGTACCCACTT +
Preference number: 4 (lower is better)
Translates to: KPQDSTSFSLPTVQSSGLHPLII*ACLYPL
Trigger: AAGTGGGTACAAACAGGCCCAGATAATAAGAGGATG...CAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTGTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR TCA 90 bp AAAAATCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACATCCTCGGAAGAGACTaGCAGCCTCCTCCAGCCATG +
Preference number: 4 (lower is better)
Translates to: KNPYIMYHSSGICFWEGDILGRD*QPPPAM
Trigger: CATGGCTGGAGGAGGCTGTCAGTCTCTTCCGAGGAT...GTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp AATCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTACTCCCGAGAGAGGCTaGGGGCACACGAAACATTTC +
Preference number: 4 (lower is better)
Translates to: NPYIMYHSSGICFWEGDTTPERG*GHTKHF
Trigger: GAAATGTTTCGTGTGCCCTCAGCCTCTCTCGGGAGT...AGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp AAAGTGCCAAAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCTGCCAAAAGACCCACTaGTCGAACCTGAGACTGTTG +
Preference number: 4 (lower is better)
Translates to: KVPKDPLIEPETVEMSCSCQKTH*SNLRLL
Trigger: CAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCA...GGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp CTGCGGAATTCCTGTCCATACTCATGTATCCACTTGTTGGCCACCCACTTATCTCAAAGCATCTTTCTCTaGGGAGCCCAGTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LRNSCPYSCIHLLATHLSQSIFL*GAQCAS
Trigger: AGAAGCACACTGGGCTCCTCAGAGAAAGATGCTTTG...AGATAAGTGGGTGGCCAACAAGTGGATACATGAGTATGGACAGGAATTCCGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR GCA 90 bp TATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTTGTCATAGGCCACCTTaGCAACTTGGAAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: YNVPLIWDMLLGGGHSLLCHRPP*QLGSSH
Trigger: ATGACTGCTTCCAAGTTGGCAAGGTGGCCTATGACA...AAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp GTGCATCCTACTCTGACTTCCGTGGCTGGGGCAGATCAAATGTACATTCTCAGTGTGGTTGGGGCTCTCTaGCAAGAGCCTTTCATATTT +
Preference number: 4 (lower is better)
Translates to: VHPTLTSVAGADQMYILSVVGAL*QEPFIF
Trigger: AAATATGAAAGGCTCTTGGCAGAGAGCCCCAACCAC...ACTGAGAATGTACATTTGATCTGCCCCAGCCACGGAAGTCAGAGTAGGATGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR GCA 90 bp TCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCCTTCACCACTCCTGTaGAGGTTCCACCAAAACAGT +
Preference number: 4 (lower is better)
Translates to: SLYNVPLIWDMLLGGGHSPSPLL*RFHQNS
Trigger: ACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGG...GGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp AAAGTGCCAAAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCCACCAGCTTCTCTCTaGCAACAGTTCAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: KVPKDPLIEPETVEMSCSPPASL*QQFSLQ
Trigger: CTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGG...GGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp GCATCCTACTCTGACTTCCGTGGCTGGGGCAGATCAAATGTACATTCTCAGTGTTTCTGTAGAGGGGGCTaGTTGGTGACTTTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: ASYSDFRGWGRSNVHSQCFCRGG*LVTFAD
Trigger: ATCAGCAAAAGTCACCAAGCAGCCCCCTCTACAGAA...ACACTGAGAATGTACATTTGATCTGCCCCAGCCACGGAAGTCAGAGTAGGATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525968.1
CDS-3UTR CCA 90 bp CCTAGGAAGTGTGAAGTGGTTCCTTATTTGCATTTCAAGACCCAGCTTTTGGCTGCCACCTTGCCAACTTaGAAGCAGTCATCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: PRKCEVVPYLHFKTQLLAATLPT*KQSSPV
Trigger: CACAGGGGATGACTGCTTCCAAGTTGGCAAGGTGGC...AGCCAAAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTCACACTTCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp AAAAATCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACGGATCTGGTAGAGAGTaGGCTGGGAACCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: KNPYIMYHSSGICFWEGDGSGRE*AGNPGS
Trigger: AGACCCTGGGTTCCCAGCCCACTCTCTACCAGATCC...GTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp TCTTTCAGATACATACCTGGGAGTGGAATAACTGGGTCAGATGACAGTTCTATGGGCTCCTGGCTTCTCTaGAAAGCCACAGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: SFRYIPGSGITGSDDSSMGSWLL*KATGLH
Trigger: GTGGAGTCCTGTGGCTTTCCAGAGAAGCCAGGAGCC...CATAGAACTGTCATCTGACCCAGTTATTCCACTCCCAGGTATGTATCTGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532689.6
CDS-3UTR CCA 90 bp GACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGAGTAACTTCTTGGTCCCTGTaGTCAAGGTTCAAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: DPLIEPETVEMSCSQQRVTSWSL*SRFKVP
Trigger: TGGCACTTTGAACCTTGACCACAGGGACCAAGAAGT...TACTCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp CTAGGAAGTGTGAAGTGGTTCCTTATTTGCATTTCAAGACCCAGCTTTTGGCTCCCATTTTGGCCAGGCTaGTCTCAAGCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: LGSVKWFLICISRPSFWLPFWPG*SQAPDL
Trigger: GAGGTCAGGAGCTTGAGACCAGCCTGGCCAAAATGG...GAGCCAAAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTCACACTTCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp GTCTGCGGAATTCCTGTCCATACTCATGTATCCACTTGTTGGCCACCCACTTATGGAGTTTCACCATTTTaGCCAGGCTGGTCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: VCGIPVHTHVSTCWPPTYGVSPF*PGWSQA
Trigger: AGCTTGAGACCAGCCTGGCCAAAATGGTGAAACTCC...ATAAGTGGGTGGCCAACAAGTGGATACATGAGTATGGACAGGAATTCCGCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR TCA 90 bp GACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGAGTAAATTTTCTGAGCCTCTaGGTCACTGACGAAGTCATG +
Preference number: 4 (lower is better)
Translates to: DPLIEPETVEMSCSQQRVNFLSL*VTDEVM
Trigger: CATGACTTCGTCAGTGACTCAGAGGCTCAGAAAATT...TACTCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp AAAAATCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACCAGCAATGCGGTGGTTaGGGGTCACCAGTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: KNPYIMYHSSGICFWEGDQQCGG*GSPVLG
Trigger: ACCCAAAACTGGTGACCCTCAACCACCGCATTGCTG...GTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000427714.2
CDS-3UTR TCA 90 bp GACAGTTCTATGTTTATCTTTCTGAGAAATCACCAATCTGTTTTCCACAGTGGCGGACATCAAGGCCTGTaGGGGCAGCAATGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: DSSMFIFLRNHQSVFHSGGHQGL*GQQCGG
Trigger: ACCACCGCATTGCTGCCCTCACAGGCCTTGATGTCC...GCCACTGTGGAAAACAGATTGGTGATTTCTCAGAAAGATAAACATAGAACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR TCA 90 bp GCTGCTATGACCATGGGTGTACAGCTATCATTCCATTCTTTCAGATACATACCTACAGGACAGCCAGCATaGAGTGTGTCACTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: AAMTMGVQLSFHSFRYIPTGQPA*SVSLSP
Trigger: AGGGGACAGTGACACACTTCATGCTGGCTGTCCTGT...AGGTATGTATCTGAAAGAATGGAATGATAGCTGTACACCCATGGTCATAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532689.6
CDS-3UTR GCA 90 bp AGGTTCAAAGTGCCAAAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTCATAGGCCACCTTaGCAACTTGGAAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: RFKVPKDPLIEPETVEMSCHRPP*QLGSSH
Trigger: ATGACTGCTTCCAAGTTGGCAAGGTGGCCTATGACA...GGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCACTTTGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp CTGCGGAATTCCTGTCCATACTCATGTATCCACTTGTTGGCCACCCACTTATCTGTTCCACCAAAACAGTaGTGCATTCCTAACCACAGG +
Preference number: 4 (lower is better)
Translates to: LRNSCPYSCIHLLATHLSVPPKQ*CIPNHR
Trigger: CCTGTGGTTAGGAATGCAGCACTGTTTTGGTGGAAC...AGATAAGTGGGTGGCCAACAAGTGGATACATGAGTATGGACAGGAATTCCGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR GCA 90 bp AGGTTCAAAGTGCCAAAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCGTTCCACCAAAACAGTaGTGCATTCCTAACCACAGG +
Preference number: 4 (lower is better)
Translates to: RFKVPKDPLIEPETVEMSVPPKQ*CIPNHR
Trigger: CCTGTGGTTAGGAATGCAGCACTGTTTTGGTGGAAC...GGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCACTTTGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR GCA 90 bp GGAAGTGTGAAGTGGTTCCTTATTTGCATTTCAAGACCCAGCTTTTGGCTCCTGCCACCAGCTTCTCTCTaGCAACAGTTCAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GSVKWFLICISRPSFWLLPPASL*QQFSLQ
Trigger: CTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGG...CAGGAGCCAAAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTCACACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000532689.6
CDS-3UTR GCA 90 bp GGAAGTGTGAAGTGGTTCCTTATTTGCATTTCAAGACCCAGCTTTTGGCTCCTGGCCTGCTGGCCTCTTTaGATGACTCTCAATGCATCT +
Preference number: 4 (lower is better)
Translates to: GSVKWFLICISRPSFWLLACWPL*MTLNAS
Trigger: AGATGCATTGAGAGTCATGCAAAGAGGCCAGCAGGC...CAGGAGCCAAAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTCACACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp CTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGAGTATCTGAACTCGGATGTTCTCACTaGCCTCCAGACTATGTACCA +
Preference number: 4 (lower is better)
Translates to: LIEPETVEMSCSQQRVSELGCSH*PPDYVP
Trigger: TGGTACATAGTCTGGAGGCCAGTGAGAACATCCGAG...TTCAGATACTCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000427714.2
CDS-3UTR CCA 90 bp TCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCAGCCTCCTCCAGCCATaGAATGGCATGGTAATAATC +
Preference number: 4 (lower is better)
Translates to: SLYNVPLIWDMLLGGGHSSLLQP*NGMVII
Trigger: GATTATTACCATGCCATTCCATGGCTGGAGGAGGCT...GGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp AAATCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACCCTCGTAGGTGTCTCTaGTCTGCAGGTGGGGTATAT +
Preference number: 4 (lower is better)
Translates to: KSLYNVPLIWDMLLGGGHPRRCL*SAGGVY
Trigger: ATATACCCCACCTGCAGACCAGAGACACCTACGAGG...GTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp AAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGACATGTATCCACTTGTTaGCCACCCACTTATCTCCCA +
Preference number: 4 (lower is better)
Translates to: KDPLIEPETVEMSCSQQRHVSTC*PPTYLP
Trigger: TGGGAGATAAGTGGGTGGCCAACAAGTGGATACATG...TCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp AGGTTCAAAGTGCCAAAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCCATGTATCCACTTGTTaGCCACCCACTTATCTCCCA +
Preference number: 4 (lower is better)
Translates to: RFKVPKDPLIEPETVEMSHVSTC*PPTYLP
Trigger: TGGGAGATAAGTGGGTGGCCAACAAGTGGATACATG...GGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCACTTTGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp CTGCGGAATTCCTGTCCATACTCATGTATCCACTTGTTGGCCACCCACTTATCTCATGTATCCACTTGTTaGCCACCCACTTATCTCCCA +
Preference number: 4 (lower is better)
Translates to: LRNSCPYSCIHLLATHLSHVSTC*PPTYLP
Trigger: TGGGAGATAAGTGGGTGGCCAACAAGTGGATACATG...AGATAAGTGGGTGGCCAACAAGTGGATACATGAGTATGGACAGGAATTCCGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CCA 90 bp TTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGAATGTACCACTCATCTaGGATATGCTTCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LYNVPLIWDMLLGGGHSLNVPLI*DMLLGG
Trigger: CCCTCCCAGAAGCATATCCCAGATGAGTGGTACATT...CAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp TATCTTTCTGAGAAATCACCAATCTGTTTTCCACAGTGGCTGCACCATTTCACAAGATGCCCCATGCATTaGCAGAGCTACCCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: YLSEKSPICFPQWLHHFTRCPMH*QSYPWP
Trigger: AGGCCACGGGTAGCTCTGCCAATGCATGGGGCATCT...TGTGAAATGGTGCAGCCACTGTGGAAAACAGATTGGTGATTTCTCAGAAAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR TCA 90 bp AATGCATCTCAGAAGGAGATGCTGAATTGTTCTAATGCTCCCAAAGCATCTTTCACTCCCGAGAGAGGCTaGGGGCACACGAAACATTTC +
Preference number: 4 (lower is better)
Translates to: NASQKEMLNCSNAPKASFTPERG*GHTKHF
Trigger: GAAATGTTTCGTGTGCCCTCAGCCTCTCTCGGGAGT...GAAAGATGCTTTGGGAGCATTAGAACAATTCAGCATCTCCTTCTGAGATGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR TCA 90 bp AAAGTGCCAAAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCAATTTTCTGAGCCTCTaGGTCACTGACGAAGTCATG +
Preference number: 4 (lower is better)
Translates to: KVPKDPLIEPETVEMSCSNFLSL*VTDEVM
Trigger: CATGACTTCGTCAGTGACTCAGAGGCTCAGAAAATT...GGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR TCA 90 bp TCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCAGTTCTCTAATTTTCTaGGCCTCTGAGTCACTGACG +
Preference number: 4 (lower is better)
Translates to: SLYNVPLIWDMLLGGGHSSSLIF*ASESLT
Trigger: CGTCAGTGACTCAGAGGCTCAGAAAATTAGAGAACT...GGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp CCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTTTGATGAGAGTAAATaGAAGCAGAGGGTTAGCCAC +
Preference number: 4 (lower is better)
Translates to: PYIMYHSSGICFWEGDTPFDESK*KQRVSH
Trigger: GTGGCTAACCCTCTGCTTGCATTTACTCTCATCAAA...GGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp ATCAAATGTACATTCTCAGTGTCCCCTGGTAACAACCTCTCCCTTGCCTCTGATGTGGTTGGGGCTCTCTaGCAAGAGCCTTTCATATTT +
Preference number: 4 (lower is better)
Translates to: IKCTFSVSPGNNLSLASDVVGAL*QEPFIF
Trigger: AAATATGAAAGGCTCTTGGCAGAGAGCCCCAACCAC...ATCAGAGGCAAGGGAGAGGTTGTTACCAGGGGACACTGAGAATGTACATTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR GCA 90 bp ATCAAATGTACATTCTCAGTGTCCCCTGGTAACAACCTCTCCCTTGCCTCTGATGTTCCACCAAAACAGTaGTGCATTCCTAACCACAGG +
Preference number: 4 (lower is better)
Translates to: IKCTFSVSPGNNLSLASDVPPKQ*CIPNHR
Trigger: CCTGTGGTTAGGAATGCAGCACTGTTTTGGTGGAAC...ATCAGAGGCAAGGGAGAGGTTGTTACCAGGGGACACTGAGAATGTACATTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR GCA 90 bp ATGACCATGGGTGTACAGCTATCATTCCATTCTTTCAGATACATACCTGGGAGTTGGAGCTGCAGGGTCTaGGGAATTCCTGTCCATACT +
Preference number: 4 (lower is better)
Translates to: MTMGVQLSFHSFRYIPGSWSCRV*GIPVHT
Trigger: AGTATGGACAGGAATTCCGCAGACCCTGCAGCTCCA...ACTCCCAGGTATGTATCTGAAAGAATGGAATGATAGCTGTACACCCATGGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532689.6
CDS-3UTR GCA 90 bp GTGAAGTGGTTCCTTATTTGCATTTCAAGACCCAGCTTTTGGCTCCTGGCTTCTGTTTTCCACAGTGGCTaGACCATTTCACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: VKWFLICISRPSFWLLASVFHSG*TISHSH
Trigger: GTGGGAATGTGAAATGGTGCAGCCACTGTGGAAAAC...AGAAGCCAGGAGCCAAAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000532689.6
CDS-3UTR CCA 90 bp CTAGGAAGTGTGAAGTGGTTCCTTATTTGCATTTCAAGACCCAGCTTTTGGCTCAAGGTCCTCAAAGGCTaGAAGGTCTTGCTCCACCTT +
Preference number: 4 (lower is better)
Translates to: LGSVKWFLICISRPSFWLKVLKG*KVLLHL
Trigger: AAGGTGGAGCAAGACCTTCCAGCCTTTGAGGACCTT...GAGCCAAAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTCACACTTCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp ATCAAATGTACATTCTCAGTGTCCCCTGGTAACAACCTCTCCCTTGCCTCTGATAGCCTCCTCCAGCCATaGAATGGCATGGTAATAATC +
Preference number: 4 (lower is better)
Translates to: IKCTFSVSPGNNLSLASDSLLQP*NGMVII
Trigger: GATTATTACCATGCCATTCCATGGCTGGAGGAGGCT...ATCAGAGGCAAGGGAGAGGTTGTTACCAGGGGACACTGAGAATGTACATTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR CCA 90 bp ACAGCCTCAGCTACCACGTGGTTGGGGCTCTCTGCCAAGAGCCTTTCATATTTCATTTCAAGACATTCCTaGCCATCCTCTTATTATCTG +
Preference number: 4 (lower is better)
Translates to: TASATTWLGLSAKSLSYFISRHS*PSSYYL
Trigger: CAGATAATAAGAGGATGGCCAGGAATGTCTTGAAAT...GAAATATGAAAGGCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CCA 90 bp ATCAAATGTACATTCTCAGTGTCCCCTGGTAACAACCTCTCCCTTGCCTCTGATTCTGACTTCCGTGGCTaGGGCAGATCAAATGTACAT +
Preference number: 4 (lower is better)
Translates to: IKCTFSVSPGNNLSLASDSDFRG*GRSNVH
Trigger: ATGTACATTTGATCTGCCCCAGCCACGGAAGTCAGA...ATCAGAGGCAAGGGAGAGGTTGTTACCAGGGGACACTGAGAATGTACATTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR CCA 90 bp AATCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCTCATTGCCACTTCTTaGTCCCTGTGGTCAAGGTTC +
Preference number: 4 (lower is better)
Translates to: NPYIMYHSSGICFWEGDTLIATS*SLWSRF
Trigger: GAACCTTGACCACAGGGACCAAGAAGTGGCAATGAG...AGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp GACAGTTCTATGTTTATCTTTCTGAGAAATCACCAATCTGTTTTCCACAGTGGCCTACCCGTGGCCTGCTaGCCTCTTTGCATGACTCTC +
Preference number: 4 (lower is better)
Translates to: DSSMFIFLRNHQSVFHSGLPVAC*PLCMTL
Trigger: GAGAGTCATGCAAAGAGGCCAGCAGGCCACGGGTAG...GCCACTGTGGAAAACAGATTGGTGATTTCTCAGAAAGATAAACATAGAACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp CCTAGGAAGTGTGAAGTGGTTCCTTATTTGCATTTCAAGACCCAGCTTTTGGCTTCAAGACCCAGCTTTTaGCTCCTGGCTTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: PRKCEVVPYLHFKTQLLASRPSF*LLASLE
Trigger: TTCCAGAGAAGCCAGGAGCCAAAAGCTGGGTCTTGA...AGCCAAAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTCACACTTCCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000532689.6
CDS-3UTR CCA 90 bp TGGAAAGCCACAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGCTAGGAAGTGTGAAGTaGTTCCTTATTTGCATTTCA +
Preference number: 4 (lower is better)
Translates to: WKATGLHQLLSANSSVFRLGSVK*FLICIS
Trigger: TGAAATGCAAATAAGGAACCACTTCACACTTCCTAG...CCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTGTGGCTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR TCA 90 bp GTTTATCTTTCTGAGAAATCACCAATCTGTTTTCCACAGTGGCTGCACCATTTCGCCAGGCACTTTTGCTaGTGCGGTACTCCACTTGTA +
Preference number: 4 (lower is better)
Translates to: VYLSEKSPICFPQWLHHFARHFC*CGTPLV
Trigger: TACAAGTGGAGTACCGCATCAGCAAAAGTGCCTGGC...GAAATGGTGCAGCCACTGTGGAAAACAGATTGGTGATTTCTCAGAAAGATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR TCA 90 bp TTTATCTTTCTGAGAAATCACCAATCTGTTTTCCACAGTGGCTGCACCATTTCAACAGGACAGCCAGCATaGAGTGTGTCACTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: FIFLRNHQSVFHSGCTISTGQPA*SVSLSP
Trigger: AGGGGACAGTGACACACTTCATGCTGGCTGTCCTGT...TGAAATGGTGCAGCCACTGTGGAAAACAGATTGGTGATTTCTCAGAAAGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000532689.6
CDS-3UTR GCA 90 bp AAATCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACGTGGTTGGGGCTCTCTaGCAAGAGCCTTTCATATTT +
Preference number: 4 (lower is better)
Translates to: KSLYNVPLIWDMLLGGGHVVGAL*QEPFIF
Trigger: AAATATGAAAGGCTCTTGGCAGAGAGCCCCAACCAC...GTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp TCCATCCTAGGAAGTGTGAAGTGGTTCCTTATTTGCATTTCAAGACCCAGCTTTCATAGTGTCCTCCGATaGCATAGTTCACCACCTGCA +
Preference number: 4 (lower is better)
Translates to: SILGSVKWFLICISRPSFHSVLR*HSSPPA
Trigger: TGCAGGTGGTGAACTATGGCATCGGAGGACACTATG...AAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTCACACTTCCTAGGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR GCA 90 bp CCTCAGCTACCACGTGGTTGGGGCTCTCTGCCAAGAGCCTTTCATATTTCAAGAAAGTGGTTCCTTATTTaGATTTCAAGACCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: PQLPRGWGSLPRAFHISRKWFLI*ISRPSF
Trigger: AAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTT...TCTTGAAATATGAAAGGCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp AAAAATCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACGCAGCAGGTAGGCGTTaGAATTGGTCTCATAGGAAC +
Preference number: 4 (lower is better)
Translates to: KNPYIMYHSSGICFWEGDAAGRR*NWSHRN
Trigger: GTTCCTATGAGACCAATTCCAACGCCTACCTGCTGC...GTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CCA 90 bp GTTTATCTTTCTGAGAAATCACCAATCTGTTTTCCACAGTGGCTGCACCATTTCAGGGCAGCAATGCGGTaGTTGAGGGTCACCAGTTTT +
Preference number: 4 (lower is better)
Translates to: VYLSEKSPICFPQWLHHFRAAMR*LRVTSF
Trigger: AAAACTGGTGACCCTCAACCACCGCATTGCTGCCCT...GAAATGGTGCAGCCACTGTGGAAAACAGATTGGTGATTTCTCAGAAAGATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp ATGACCATGGGTGTACAGCTATCATTCCATTCTTTCAGATACATACCTGGGAGTTCAAGACCCAGCTTTTaGCTCCTGGCTTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: MTMGVQLSFHSFRYIPGSSRPSF*LLASLE
Trigger: TTCCAGAGAAGCCAGGAGCCAAAAGCTGGGTCTTGA...ACTCCCAGGTATGTATCTGAAAGAATGGAATGATAGCTGTACACCCATGGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532689.6
3UTR CAA 72 bp TGTATCCATCCTAGGAAGTGTGAAGTGGTTCCTTATTaGCATTTCAAGACCCAGCTTTTGGCTCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: CIHPRKCEVVPY*HFKTQLLAPGF
Trigger: GAAGCCAGGAGCCAAAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTCACACTTCCTAGGATGGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000532689.6
CDS-3UTR GCA 90 bp CTTTTGACGATTGTGAATAAAGCTGCTATGACCATGGGTGTACAGCTATCATTCCCTTCACCACTCCTGTaGAGGTTCCACCAAAACAGT +
Preference number: 4 (lower is better)
Translates to: LLTIVNKAAMTMGVQLSFPSPLL*RFHQNS
Trigger: ACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGG...GAATGATAGCTGTACACCCATGGTCATAGCAGCTTTATTCACAATCGTCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532689.6
CDS-3UTR CCA 90 bp GCATCCTACTCTGACTTCCGTGGCTGGGGCAGATCAAATGTACATTCTCAGTGTATTTCAAGACATTCCTaGCCATCCTCTTATTATCTG +
Preference number: 4 (lower is better)
Translates to: ASYSDFRGWGRSNVHSQCISRHS*PSSYYL
Trigger: CAGATAATAAGAGGATGGCCAGGAATGTCTTGAAAT...ACACTGAGAATGTACATTTGATCTGCCCCAGCCACGGAAGTCAGAGTAGGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR CCA 90 bp TATCTTTCTGAGAAATCACCAATCTGTTTTCCACAGTGGCTGCACCATTTCACAGCAGCAGGTAGGCGTTaGAATTGGTCTCATAGGAAC +
Preference number: 4 (lower is better)
Translates to: YLSEKSPICFPQWLHHFTAAGRR*NWSHRN
Trigger: GTTCCTATGAGACCAATTCCAACGCCTACCTGCTGC...TGTGAAATGGTGCAGCCACTGTGGAAAACAGATTGGTGATTTCTCAGAAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp TCTTTCAGATACATACCTGGGAGTGGAATAACTGGGTCAGATGACAGTTCTATGCATGTATCCACTTGTTaGCCACCCACTTATCTCCCA +
Preference number: 4 (lower is better)
Translates to: SFRYIPGSGITGSDDSSMHVSTC*PPTYLP
Trigger: TGGGAGATAAGTGGGTGGCCAACAAGTGGATACATG...CATAGAACTGTCATCTGACCCAGTTATTCCACTCCCAGGTATGTATCTGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532689.6
CDS-3UTR CCA 90 bp ATTGTATCCATCCTAGGAAGTGTGAAGTGGTTCCTTATTTGCATTTCAAGACCCTGTTTGTACCCACTTTaGCTGCAAGATGCCCCATGC +
Preference number: 4 (lower is better)
Translates to: IVSILGSVKWFLICISRPCLYPL*LQDAPC
Trigger: GCATGGGGCATCTTGCAGCCAAAGTGGGTACAAACA...GGGTCTTGAAATGCAAATAAGGAACCACTTCACACTTCCTAGGATGGATACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp GTCTGCGGAATTCCTGTCCATACTCATGTATCCACTTGTTGGCCACCCACTTATTTAGTCTTCTTAATCTaGGAGTGGAATAACTGGGTC +
Preference number: 4 (lower is better)
Translates to: VCGIPVHTHVSTCWPPTYLVFLI*EWNNWV
Trigger: GACCCAGTTATTCCACTCCCAGATTAAGAAGACTAA...ATAAGTGGGTGGCCAACAAGTGGATACATGAGTATGGACAGGAATTCCGCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR GCA 90 bp TATCTTTCTGAGAAATCACCAATCTGTTTTCCACAGTGGCTGCACCATTTCACAGTTCCACCAAAACAGTaGTGCATTCCTAACCACAGG +
Preference number: 4 (lower is better)
Translates to: YLSEKSPICFPQWLHHFTVPPKQ*CIPNHR
Trigger: CCTGTGGTTAGGAATGCAGCACTGTTTTGGTGGAAC...TGTGAAATGGTGCAGCCACTGTGGAAAACAGATTGGTGATTTCTCAGAAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000532689.6
CDS-3UTR GCA 90 bp CTTTTGACGATTGTGAATAAAGCTGCTATGACCATGGGTGTACAGCTATCATTCGTTTTCCACAGTGGCTaGACCATTTCACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: LLTIVNKAAMTMGVQLSFVFHSG*TISHSH
Trigger: GTGGGAATGTGAAATGGTGCAGCCACTGTGGAAAAC...GAATGATAGCTGTACACCCATGGTCATAGCAGCTTTATTCACAATCGTCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532689.6
CDS-3UTR GCA 90 bp GTGAAGTGGTTCCTTATTTGCATTTCAAGACCCAGCTTTTGGCTCCTGGCTTCTGCAAGTTATCTGACTTaGCTCAGCTTTAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VKWFLICISRPSFWLLASASYLT*LSFSLL
Trigger: AAGAAGACTAAAGCTGAGGCAAGTCAGATAACTTGC...AGAAGCCAGGAGCCAAAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp GACAGTTCTATGTTTATCTTTCTGAGAAATCACCAATCTGTTTTCCACAGTGGCCCTCCAGCCATGGAATaGCATGGTAATAATCCCCCA +
Preference number: 4 (lower is better)
Translates to: DSSMFIFLRNHQSVFHSGPPAME*HGNNPP
Trigger: TGGGGGATTATTACCATGCCATTCCATGGCTGGAGG...GCCACTGTGGAAAACAGATTGGTGATTTCTCAGAAAGATAAACATAGAACTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp AAAAATCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACGGTAGGCGTTGGAATTaGTCTCATAGGAACAGTAGA +
Preference number: 4 (lower is better)
Translates to: KNPYIMYHSSGICFWEGDGRRWN*SHRNSR
Trigger: TCTACTGTTCCTATGAGACCAATTCCAACGCCTACC...GTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR GCA 90 bp TTTATCTTTCTGAGAAATCACCAATCTGTTTTCCACAGTGGCTGCACCATTTCAATAGGTGTGAGCCACTaGAGCTGGCCAGTATTTTTC +
Preference number: 4 (lower is better)
Translates to: FIFLRNHQSVFHSGCTISIGVSH*SWPVFF
Trigger: GAAAAATACTGGCCAGCTGCAGTGGCTCACACCTAT...TGAAATGGTGCAGCCACTGTGGAAAACAGATTGGTGATTTCTCAGAAAGATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp ATCAAATGTACATTCTCAGTGTCCCCTGGTAACAACCTCTCCCTTGCCTCTGATATTTCAAGACATTCCTaGCCATCCTCTTATTATCTG +
Preference number: 4 (lower is better)
Translates to: IKCTFSVSPGNNLSLASDISRHS*PSSYYL
Trigger: CAGATAATAAGAGGATGGCCAGGAATGTCTTGAAAT...ATCAGAGGCAAGGGAGAGGTTGTTACCAGGGGACACTGAGAATGTACATTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR TCA 90 bp TTTATCTTTCTGAGAAATCACCAATCTGTTTTCCACAGTGGCTGCACCATTTCAAATTTTCTGAGCCTCTaGGTCACTGACGAAGTCATG +
Preference number: 4 (lower is better)
Translates to: FIFLRNHQSVFHSGCTISNFLSL*VTDEVM
Trigger: CATGACTTCGTCAGTGACTCAGAGGCTCAGAAAATT...TGAAATGGTGCAGCCACTGTGGAAAACAGATTGGTGATTTCTCAGAAAGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CCA 90 bp CCATGGGTGTACAGCTATCATTCCATTCTTTCAGATACATACCTGGGAGTGGAACTAGGAAGTGTGAAGTaGTTCCTTATTTGCATTTCA +
Preference number: 4 (lower is better)
Translates to: PWVYSYHSILSDTYLGVELGSVK*FLICIS
Trigger: TGAAATGCAAATAAGGAACCACTTCACACTTCCTAG...TTCCACTCCCAGGTATGTATCTGAAAGAATGGAATGATAGCTGTACACCCATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532689.6
CDS-3UTR CCA 90 bp ATTGTATCCATCCTAGGAAGTGTGAAGTGGTTCCTTATTTGCATTTCAAGACCCTTTCAGATACATACCTaGGAGTGGAATAACTGGGTC +
Preference number: 4 (lower is better)
Translates to: IVSILGSVKWFLICISRPFQIHT*EWNNWV
Trigger: GACCCAGTTATTCCACTCCCAGGTATGTATCTGAAA...GGGTCTTGAAATGCAAATAAGGAACCACTTCACACTTCCTAGGATGGATACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532689.6
CDS-3UTR GCA 90 bp ATGACCATGGGTGTACAGCTATCATTCCATTCTTTCAGATACATACCTGGGAGTAAGTGGTTCCTTATTTaGATTTCAAGACCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: MTMGVQLSFHSFRYIPGSKWFLI*ISRPSF
Trigger: AAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTT...ACTCCCAGGTATGTATCTGAAAGAATGGAATGATAGCTGTACACCCATGGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532689.6
CDS CCA 90 bp GCTGGTCAGCGCCGAGAACGTGTCGCCCCGAGCCGCAGCCCTTTCTaGGTCTCCTGTCCCGAGCGCCAGCACCGCCAGCAGCGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: AGQRRERVAPSRSPF*VSCPERQHRQQRRQ
Trigger: CTGGCGGCGCTGCTGGCGGTGCTGGCGCTCGGGACAGGAGACCCAGAAAGGGCTGCGGCTCGGGGCGACACGTTCTCGGCGCTGACCAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CAA 90 bp GGCCTCTGGATGACAGCCTCAGCTACCACGTGGTTGGGGCTCTCTGCCAAGAGCGGCCACCTTGCCAACTaGGAAGCAGTCATCCCCTGT +
Preference number: 5 (lower is better)
Translates to: GLWMTASATTWLGLSAKSGHLAN*EAVIPC
Trigger: ACAGGGGATGACTGCTTCCAAGTTGGCAAGGTGGCC...GCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGAGGCTGTCATCCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CAA 90 bp GTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGTCAGCTACCACGTGGTaGGGGCTCTCTGCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: VPLIWDMLLGGGHSLLGLSATTW*GLSAKS
Trigger: GCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGA...CAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS CCA 90 bp CAGCCGCATCAGGGCCCTTGCTGCTCCCTCAAGGTCCTCAAAGGCTaGAAGGTCTTGCTCCACCTTCTCATAGCCATCCTTCAGAGCTCG +
Preference number: 5 (lower is better)
Translates to: QPHQGPCCSLKVLKG*KVLLHLLIAILQSS
Trigger: CGAGCTCTGAAGGATGGCTATGAGAAGGTGGAGCAAGACCTTCCAGCCTTTGAGGACCTTGAGGGAGCAGCAAGGGCCCTGATGCGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000524388.5
CDS-3UTR CAA 90 bp ACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCACTCCTACCCCAGCTTTaGGCTCCTGGCTTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: THLGYASGRGTLPAWAAALLPQL*APGFSG
Trigger: TCCAGAGAAGCCAGGAGCCAAAAGCTGGGGTAGGAG...TGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp CAGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGTGGTCCTGCAGGTGTCCTCATaGCCACTTCTTGGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: QASPSCRCPHCHFLVPVVLQVSS*PLLGPC
Trigger: ACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAG...GACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS CCA 90 bp CAGCCGCATCAGGGCCCTTGCTGCTCCCTCAAGGTCCTCAAAGGCTaGAAGGTCTTGCTCCACCTTCTCATAGCCATCCTTCAGAGCACA +
Preference number: 5 (lower is better)
Translates to: QPHQGPCCSLKVLKG*KVLLHLLIAILQST
Trigger: TGTGCTCTGAAGGATGGCTATGAGAAGGTGGAGCAAGACCTTCCAGCCTTTGAGGACCTTGAGGGAGCAGCAAGGGCCCTGATGCGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525968.1
CDS-3UTR CAA 90 bp GGAGAAAGTCTTAAAGTTCTGGGAGTCAGGCTAGCCCCTCCTGCAGGTGTCCTCTCAGCTACCACGTGGTaGGGGCTCTCTGCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: GESLKVLGVRLAPPAGVLSATTW*GLSAKS
Trigger: GCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGA...GAGGACACCTGCAGGAGGGGCTAGCCTGACTCCCAGAACTTTAAGACTTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp CAGGGCTGGAGCTGCAGGGTCTGCGGAATTCCTGTCCATACTCATGTATCCACTTCAGCTACCACGTGGTaGGGGCTCTCTGCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: QGWSCRVCGIPVHTHVSTSATTW*GLSAKS
Trigger: GCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGA...AGTGGATACATGAGTATGGACAGGAATTCCGCAGACCCTGCAGCTCCAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CAA 90 bp CCAGGACAGGACAGCCAGCATGAAGTGTGTCACTGTCCCCTTCACCACTCCTGTGCAGCAATGCGGTGGTaGAGGGTCACCAGTTTTGGG +
Preference number: 5 (lower is better)
Translates to: PGQDSQHEVCHCPLHHSCAAMRW*RVTSFG
Trigger: CCCAAAACTGGTGACCCTCAACCACCGCATTGCTGC...ACAGGAGTGGTGAAGGGGACAGTGACACACTTCATGCTGGCTGTCCTGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CAA 90 bp CTGGGAGTCAGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCTCCCTTGCCTCTGATTaGCGAGGCACAGACAAAGCT +
Preference number: 5 (lower is better)
Translates to: LGVRLAPPAGVLIATSWSSLASD*RGTDKA
Trigger: AGCTTTGTCTGTGCCTCGCAAATCAGAGGCAAGGGA...GGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCTGACTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp CTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCAGGTAACAACCTCTCCCTaGCCTCTGATTTGCGAGGCA +
Preference number: 5 (lower is better)
Translates to: LIWDMLLGGGHSLLGLQQVTTSP*PLICEA
Trigger: TGCCTCGCAAATCAGAGGCAAGGGAGAGGTTGTTAC...CTGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp ACGTCCTGCAGCCGCATCAGGGCCCTTGCTGCTCCCTCAAGGTCCTCAAAGGCTTCGAACCTGAGACTGTaGAGATGTCCTGTTCCCAAC +
Preference number: 5 (lower is better)
Translates to: TSCSRIRALAAPSRSSKASNLRL*RCPVPN
Trigger: GTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGA...AGCCTTTGAGGACCTTGAGGGAGCAGCAAGGGCCCTGATGCGGCTGCAGGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525968.1
CDS-3UTR CAA 90 bp TATCTCCCACCAGGACAGGACAGCCAGCATGAAGTGTGTCACTGTCCCCTTCACAAGATGCCCCATGCATaGGCAGAGCTACCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: YLPPGQDSQHEVCHCPLHKMPHA*AELPVA
Trigger: GGCCACGGGTAGCTCTGCCAATGCATGGGGCATCTT...GTGAAGGGGACAGTGACACACTTCATGCTGGCTGTCCTGTCCTGGTGGGAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CAA 90 bp GGAGAAAGTCTTAAAGTTCTGGGAGTCAGGCTAGCCCCTCCTGCAGGTGTCCTCGGCCACCTTGCCAACTaGGAAGCAGTCATCCCCTGT +
Preference number: 5 (lower is better)
Translates to: GESLKVLGVRLAPPAGVLGHLAN*EAVIPC
Trigger: ACAGGGGATGACTGCTTCCAAGTTGGCAAGGTGGCC...GAGGACACCTGCAGGAGGGGCTAGCCTGACTCCCAGAACTTTAAGACTTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp ACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCATTCAGCCAGGCACTTTaGCTGATGCGGTACTCCACT +
Preference number: 5 (lower is better)
Translates to: THLGYASGRGTLPAWAAAFSQAL*LMRYST
Trigger: AGTGGAGTACCGCATCAGCAAAAGTGCCTGGCTGAA...TGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000427714.2
CDS-3UTR CAA 90 bp CCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCGGGGACACTCCCTGCTaGGGCTGCAGCAGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: PYIMYHSSGICFWEGDTPGDTPC*GCSRRQ
Trigger: CTGCCTTCTGCTGCAGCCCAAGCAGGGAGTGTCCCC...GGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp ACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGGAGCTGCAGGGTCTGTGTAGAGGGGGCTGCTaGGTGACTTTTGCTGATGCG +
Preference number: 5 (lower is better)
Translates to: TSFSLPTVQSSGLELQGLCRGGC*VTFADA
Trigger: CGCATCAGCAAAAGTCACCAAGCAGCCCCCTCTACA...CAGACCCTGCAGCTCCAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525968.1
CDS-3UTR CAA 90 bp TCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATTCCTAACCACAGGCCCTCTACCTCCCAGGTaGAAGCAGTTCCGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: SPLLCRFHQNSAAFLTTGPLPPR*KQFRAS
Trigger: TGAGGCCCGGAACTGCTTCAACCTGGGAGGTAGAGG...GCCTGTGGTTAGGAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CAA 90 bp TGGGGAGAAAGTCTTAAAGTTCTGGGAGTCAGGCTAGCCCCTCCTGCAGGTGTCGCCAGGCCTTTCACATaGAGCATGTACACGTCCTGC +
Preference number: 5 (lower is better)
Translates to: WGESLKVLGVRLAPPAGVARPFT*SMYTSC
Trigger: GCAGGACGTGTACATGCTCAATGTGAAAGGCCTGGC...GACACCTGCAGGAGGGGCTAGCCTGACTCCCAGAACTTTAAGACTTTCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp ACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTGCAGCAAGGCATCTTCTAGACTaGCCTCATCCTCTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: THLGYASGRGTLPAWAAARHLLD*PHPLSS
Trigger: GGAAGACAGAGGATGAGGCAAGTCTAGAAGATGCCT...TGCTGCAGCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp GTAGAGAGCAATGTAGGGCTCCAGGTGGATGACCTCCTTCCGGATGGGCTGGAGTCATGTATCCACTTGTaGGCCACCCACTTATCTCCC +
Preference number: 5 (lower is better)
Translates to: VESNVGLQVDDLLPDGLESCIHL*ATHLSP
Trigger: GGGAGATAAGTGGGTGGCCAACAAGTGGATACATGA...CTCCAGCCCATCCGGAAGGAGGTCATCCACCTGGAGCCCTACATTGCTCTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CAA 90 bp ATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTCCCTTGCCTCTGATTaGCGAGGCACAGACAAAGCT +
Preference number: 5 (lower is better)
Translates to: MYHSSGICFWEGDTPCLGSLASD*RGTDKA
Trigger: AGCTTTGTCTGTGCCTCGCAAATCAGAGGCAAGGGA...GCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp ATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCCCTCATTGCCACTTCTaGGTCCCTGTGGTCAAGGTT +
Preference number: 5 (lower is better)
Translates to: MYHSSGICFWEGDTPCLGPHCHF*VPVVKV
Trigger: AACCTTGACCACAGGGACCAAGAAGTGGCAATGAGG...GCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp GGAGAAAGTCTTAAAGTTCTGGGAGTCAGGCTAGCCCCTCCTGCAGGTGTCCTCCTGCAGGTGTCCTCATaGCCACTTCTTGGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: GESLKVLGVRLAPPAGVLLQVSS*PLLGPC
Trigger: ACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAG...GAGGACACCTGCAGGAGGGGCTAGCCTGACTCCCAGAACTTTAAGACTTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp AAAGTGCCAAAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCGGGGACACTCCCTGCTaGGGCTGCAGCAGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: KVPKDPLIEPETVEMSCSGDTPC*GCSRRQ
Trigger: CTGCCTTCTGCTGCAGCCCAAGCAGGGAGTGTCCCC...GGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp CCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTCAGCTACCACGTGGTaGGGGCTCTCTGCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: PYIMYHSSGICFWEGDTPSATTW*GLSAKS
Trigger: GCTCTTGGCAGAGAGCCCCAACCACGTGGTAGCTGA...GGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp ATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTCATGTATCCACTTGTaGGCCACCCACTTATCTCCC +
Preference number: 5 (lower is better)
Translates to: MYHSSGICFWEGDTPCLGSCIHL*ATHLSP
Trigger: GGGAGATAAGTGGGTGGCCAACAAGTGGATACATGA...GCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp ACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGGAGCTGCAGGGTCTGTCATGTATCCACTTGTaGGCCACCCACTTATCTCCC +
Preference number: 5 (lower is better)
Translates to: TSFSLPTVQSSGLELQGLSCIHL*ATHLSP
Trigger: GGGAGATAAGTGGGTGGCCAACAAGTGGATACATGA...CAGACCCTGCAGCTCCAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CAA 90 bp ATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTGGGCTCGAACCTGAGACTGTaGAGATGTCCTGTTCCCAAC +
Preference number: 5 (lower is better)
Translates to: MYHSSGICFWEGDTPCLGSNLRL*RCPVPN
Trigger: GTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGA...GCCCAAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp TGGCTTCTCTGGAAAGCCACAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAGGCCTGCTGGCCTCTTaGCATGACTCTCAATGCATC +
Preference number: 5 (lower is better)
Translates to: WLLWKATGLHQLLSANSSGLLAS*HDSQCI
Trigger: GATGCATTGAGAGTCATGCAAAGAGGCCAGCAGGCC...TGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTGTGGCTTTCCAGAGAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CAA 90 bp GTGTCACTGTCCCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCACTGTTTGTACCCACTTaGGCTGCAAGATGCCCCATG +
Preference number: 5 (lower is better)
Translates to: VSLSPSPLLCRFHQNSAALFVPT*AARCPM
Trigger: CATGGGGCATCTTGCAGCCAAAGTGGGTACAAACAG...TGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGGGACAGTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CAA 90 bp AGGCTAGCCCCTCCTGCAGGTGTCCTCATTGCCACTTCTTGGTCCCTGTGGTCATACTCATGTATCCACTaGTTGGCCACCCACTTATCT +
Preference number: 5 (lower is better)
Translates to: RLAPPAGVLIATSWSLWSYSCIH*LATHLS
Trigger: AGATAAGTGGGTGGCCAACAAGTGGATACATGAGTA...TGACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGGCTAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp GACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGAGTACTCCTACCCCAGCTTTaGGCTCCTGGCTTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: DPLIEPETVEMSCSQQRVLLPQL*APGFSG
Trigger: TCCAGAGAAGCCAGGAGCCAAAAGCTGGGGTAGGAG...TACTCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp AAATCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACGGGGACACTCCCTGCTaGGGCTGCAGCAGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: KSLYNVPLIWDMLLGGGHGDTPC*GCSRRQ
Trigger: CTGCCTTCTGCTGCAGCCCAAGCAGGGAGTGTCCCC...GTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp ACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGGAGCTGCAGGGTCTGATTATCTGGGCCTGTTaGTACCCACTTTGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: TSFSLPTVQSSGLELQGLIIWAC*YPLWLQ
Trigger: TTGCAGCCAAAGTGGGTACAAACAGGCCCAGATAAT...CAGACCCTGCAGCTCCAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CAA 90 bp GTGTCACTGTCCCCTTCACCACTCCTGTGCAGGTTCCACCAAAACAGTGCTGCATCAGACTGCAGGCGTTaGATGAGAGTAAATGCAAGC +
Preference number: 5 (lower is better)
Translates to: VSLSPSPLLCRFHQNSAASDCRR*MRVNAS
Trigger: GCTTGCATTTACTCTCATCAAACGCCTGCAGTCTGA...TGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGGGGACAGTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CAA 90 bp AAAGTGCCAAAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCGGCCACCTTGCCAACTaGGAAGCAGTCATCCCCTGT +
Preference number: 5 (lower is better)
Translates to: KVPKDPLIEPETVEMSCSGHLAN*EAVIPC
Trigger: ACAGGGGATGACTGCTTCCAAGTTGGCAAGGTGGCC...GGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp CTGCGGAATTCCTGTCCATACTCATGTATCCACTTGTTGGCCACCCACTTATCTGGCCACCTTGCCAACTaGGAAGCAGTCATCCCCTGT +
Preference number: 5 (lower is better)
Translates to: LRNSCPYSCIHLLATHLSGHLAN*EAVIPC
Trigger: ACAGGGGATGACTGCTTCCAAGTTGGCAAGGTGGCC...AGATAAGTGGGTGGCCAACAAGTGGATACATGAGTATGGACAGGAATTCCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CAA 90 bp TGGAAAGCCACAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGAGGCATCTTCTAGACTaGCCTCATCCTCTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: WKATGLHQLLSANSSVFRRHLLD*PHPLSS
Trigger: GGAAGACAGAGGATGAGGCAAGTCTAGAAGATGCCT...CCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTGTGGCTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CAA 90 bp AGGTTCAAAGTGCCAAAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCGCAGCAATGCGGTGGTaGAGGGTCACCAGTTTTGGG +
Preference number: 5 (lower is better)
Translates to: RFKVPKDPLIEPETVEMSAAMRW*RVTSFG
Trigger: CCCAAAACTGGTGACCCTCAACCACCGCATTGCTGC...GGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCACTTTGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000427714.2
CDS-3UTR CAA 90 bp AAAGTGCCAAAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCGCAGCAATGCGGTGGTaGAGGGTCACCAGTTTTGGG +
Preference number: 5 (lower is better)
Translates to: KVPKDPLIEPETVEMSCSAAMRW*RVTSFG
Trigger: CCCAAAACTGGTGACCCTCAACCACCGCATTGCTGC...GGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000427714.2
CDS-3UTR CAA 90 bp CAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGGCTGGAGCTGTACTCATGTATCCACTaGTTGGCCACCCACTTATCT +
Preference number: 5 (lower is better)
Translates to: QDSTSFSLPTVQSSGLELYSCIH*LATHLS
Trigger: AGATAAGTGGGTGGCCAACAAGTGGATACATGAGTA...CAGCTCCAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CAA 90 bp GCATCCTACTCTGACTTCCGTGGCTGGGGCAGATCAAATGTACATTCTCAGTGTCTGCAGGTGTCCTCATaGCCACTTCTTGGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: ASYSDFRGWGRSNVHSQCLQVSS*PLLGPC
Trigger: ACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAG...ACACTGAGAATGTACATTTGATCTGCCCCAGCCACGGAAGTCAGAGTAGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS TCA 90 bp CTAACCACAACCATCACCTGTAGAGAAGAAACTCCCGAGAGAGGCTaGGGGCACACGAAACATTTCCTGCCCGGAAATAAGCAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: LTTTITCREETPERG*GHTKHFLPGNKQRP
Trigger: TGGCCTTTGCTTATTTCCGGGCAGGAAATGTTTCGTGTGCCCTCAGCCTCTCTCGGGAGTTTCTTCTCTACAGGTGATGGTTGTGGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CAA 90 bp TGGAAAGCCACAGGACTCCACCAGCTTCTCTCTGCCAACAGTTCAGTCTTCAGGTCAGACTGCAGGCGTTaGATGAGAGTAAATGCAAGC +
Preference number: 5 (lower is better)
Translates to: WKATGLHQLLSANSSVFRSDCRR*MRVNAS
Trigger: GCTTGCATTTACTCTCATCAAACGCCTGCAGTCTGA...CCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTGGAGTCCTGTGGCTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CAA 90 bp ATCAAATGTACATTCTCAGTGTCCCCTGGTAACAACCTCTCCCTTGCCTCTGATCTCCTACCCCAGCTTTaGGCTCCTGGCTTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: IKCTFSVSPGNNLSLASDLLPQL*APGFSG
Trigger: TCCAGAGAAGCCAGGAGCCAAAAGCTGGGGTAGGAG...ATCAGAGGCAAGGGAGAGGTTGTTACCAGGGGACACTGAGAATGTACATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR CAA 90 bp TATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGCTTTCCCTTGCCTCTGATTaGCGAGGCACAGACAAAGCT +
Preference number: 5 (lower is better)
Translates to: YNVPLIWDMLLGGGHSLLSLASD*RGTDKA
Trigger: AGCTTTGTCTGTGCCTCGCAAATCAGAGGCAAGGGA...AAGCAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp TGTACATTCTCAGTGTCCCCTGGTAACAACCTCTCCCTTGCCTCTGATTTGCGAGTAACAACCTCTCCCTaGCCTCTGATTTGCGAGGCA +
Preference number: 5 (lower is better)
Translates to: CTFSVSPGNNLSLASDLRVTTSP*PLICEA
Trigger: TGCCTCGCAAATCAGAGGCAAGGGAGAGGTTGTTAC...TCGCAAATCAGAGGCAAGGGAGAGGTTGTTACCAGGGGACACTGAGAATGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR CAA 90 bp GACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGAGTACCTCATTGCCACTTCTaGGTCCCTGTGGTCAAGGTT +
Preference number: 5 (lower is better)
Translates to: DPLIEPETVEMSCSQQRVPHCHF*VPVVKV
Trigger: AACCTTGACCACAGGGACCAAGAAGTGGCAATGAGG...TACTCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS GCA 90 bp TTCTCACTGGCCTCCAGACTATGTACCACATTCCTCCAGTCAGACTaGAGGCGTTTGATGAGAGTAAATGCAAGCAGAGGGTTAGCCACA +
Preference number: 5 (lower is better)
Translates to: FSLASRLCTTFLQSD*RRLMRVNASRGLAT
Trigger: TGTGGCTAACCCTCTGCTTGCATTTACTCTCATCAAACGCCTGCAGTCTGACTGGAGGAATGTGGTACATAGTCTGGAGGCCAGTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000524388.5
CDS-3UTR CAA 90 bp GACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGAGTAAGGCATCTTCTAGACTaGCCTCATCCTCTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: DPLIEPETVEMSCSQQRVRHLLD*PHPLSS
Trigger: GGAAGACAGAGGATGAGGCAAGTCTAGAAGATGCCT...TACTCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp CTCGGTTTCCTGACTTCATTCTGTAGAGGGGGCTGCTTGGTGACTTTTGCTGATAGGCATCTTCTAGACTaGCCTCATCCTCTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LGFLTSFCRGGCLVTFADRHLLD*PHPLSS
Trigger: GGAAGACAGAGGATGAGGCAAGTCTAGAAGATGCCT...ATCAGCAAAAGTCACCAAGCAGCCCCCTCTACAGAATGAAGTCAGGAAACCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525968.1
CDS-3UTR CAA 90 bp AAAGTGCCAAAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCGTAACAACCTCTCCCTaGCCTCTGATTTGCGAGGCA +
Preference number: 5 (lower is better)
Translates to: KVPKDPLIEPETVEMSCSVTTSP*PLICEA
Trigger: TGCCTCGCAAATCAGAGGCAAGGGAGAGGTTGTTAC...GGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS TCA 90 bp GACACTCACCCATGGTTCTGCAAGTTCTCTAATTTTCTGAGCCTCTaGGTCACTGACGAAGTCATGGTAGAGAGCAATGTAGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: DTHPWFCKFSNFLSL*VTDEVMVESNVGLQ
Trigger: CTGGAGCCCTACATTGCTCTCTACCATGACTTCGTCAGTGACTCAGAGGCTCAGAAAATTAGAGAACTTGCAGAACCATGGGTGAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531716.1
CDS-3UTR CAA 90 bp ACTGTGCATCCTACTCTGACTTCCGTGGCTGGGGCAGATCAAATGTACATTCTCTCAGACTGCAGGCGTTaGATGAGAGTAAATGCAAGC +
Preference number: 5 (lower is better)
Translates to: TVHPTLTSVAGADQMYILSDCRR*MRVNAS
Trigger: GCTTGCATTTACTCTCATCAAACGCCTGCAGTCTGA...GAGAATGTACATTTGATCTGCCCCAGCCACGGAAGTCAGAGTAGGATGCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000525968.1
CDS-3UTR CAA 90 bp CCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTCAGACTGCAGGCGTTaGATGAGAGTAAATGCAAGC +
Preference number: 5 (lower is better)
Translates to: PYIMYHSSGICFWEGDTPSDCRR*MRVNAS
Trigger: GCTTGCATTTACTCTCATCAAACGCCTGCAGTCTGA...GGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp CTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCCAACAGAGAGTATCTGAATTCAGCCAGGCACTTTaGCTGATGCGGTACTCCACT +
Preference number: 5 (lower is better)
Translates to: LIEPETVEMSCSQQRVSEFSQAL*LMRYST
Trigger: AGTGGAGTACCGCATCAGCAAAAGTGCCTGGCTGAA...TTCAGATACTCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331597.9
ENST00000427714.2
CDS-3UTR CAA 90 bp AAAGTGCCAAAAGACCCACTGATCGAACCTGAGACTGTTGAGATGTCCTGTTCCTCATGTATCCACTTGTaGGCCACCCACTTATCTCCC +
Preference number: 5 (lower is better)
Translates to: KVPKDPLIEPETVEMSCSSCIHL*ATHLSP
Trigger: GGGAGATAAGTGGGTGGCCAACAAGTGGATACATGA...GGAACAGGACATCTCAACAGTCTCAGGTTCGATCAGTGGGTCTTTTGGCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp TTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCCTGTCGAACCTGAGACTGTaGAGATGTCCTGTTCCCAAC +
Preference number: 5 (lower is better)
Translates to: LYNVPLIWDMLLGGGHSLSNLRL*RCPVPN
Trigger: GTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGA...CAGGGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS GCA 90 bp TTTCTTTCCCAGTGTGAAGAGTGGCCAGATTCGAAATCTGGAGTCTaGCCGTGTCTCAATGGTTGGCCAAGTCAAACAGTAGGTCTTACT +
Preference number: 5 (lower is better)
Translates to: FLSQCEEWPDSKSGV*PCLNGWPSQTVGLT
Trigger: AGTAAGACCTACTGTTTGACTTGGCCAACCATTGAGACACGGGCAGACTCCAGATTTCGAATCTGGCCACTCTTCACACTGGGAAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540363.1
CDS-3UTR CAA 90 bp CCTAGGAAGTGTGAAGTGGTTCCTTATTTGCATTTCAAGACCCAGCTTTTGGCTTTCAGCCAGGCACTTTaGCTGATGCGGTACTCCACT +
Preference number: 5 (lower is better)
Translates to: PRKCEVVPYLHFKTQLLAFSQAL*LMRYST
Trigger: AGTGGAGTACCGCATCAGCAAAAGTGCCTGGCTGAA...AGCCAAAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTCACACTTCCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS-3UTR CAA 90 bp AAATCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACCCTCATTGCCACTTCTaGGTCCCTGTGGTCAAGGTT +
Preference number: 5 (lower is better)
Translates to: KSLYNVPLIWDMLLGGGHPHCHF*VPVVKV
Trigger: AACCTTGACCACAGGGACCAAGAAGTGGCAATGAGG...GTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp CCTAGGAAGTGTGAAGTGGTTCCTTATTTGCATTTCAAGACCCAGCTTTTGGCTTCATGTATCCACTTGTaGGCCACCCACTTATCTCCC +
Preference number: 5 (lower is better)
Translates to: PRKCEVVPYLHFKTQLLASCIHL*ATHLSP
Trigger: GGGAGATAAGTGGGTGGCCAACAAGTGGATACATGA...AGCCAAAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTCACACTTCCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000532689.6
CDS-3UTR CAA 90 bp TCCTTATATAATGTACCACTCATCTGGGATATGCTTCTGGGAGGGGGACACTCCTACTCATGTATCCACTaGTTGGCCACCCACTTATCT +
Preference number: 5 (lower is better)
Translates to: SLYNVPLIWDMLLGGGHSYSCIH*LATHLS
Trigger: AGATAAGTGGGTGGCCAACAAGTGGATACATGAGTA...GGAGTGTCCCCCTCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000525968.1
CDS-3UTR CAA 90 bp AGGAAGTGTGAAGTGGTTCCTTATTTGCATTTCAAGACCCAGCTTTTGGCTCCTTACTCATGTATCCACTaGTTGGCCACCCACTTATCT +
Preference number: 5 (lower is better)
Translates to: RKCEVVPYLHFKTQLLAPYSCIH*LATHLS
Trigger: AGATAAGTGGGTGGCCAACAAGTGGATACATGAGTA...AGGAGCCAAAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTCACACTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000532689.6
CDS TCA 90 bp TTTGATGAGAGTAAATGCAAGCAGAGGGTTAGCCACAGGGGTTGTTaGATCCTCATGCAAAGAAAGTACCTTGTCGTAGAATCTAGTCAG +
Preference number: 5 (lower is better)
Translates to: FDESKCKQRVSHRGC*ILMQRKYLVVESSQ
Trigger: CTGACTAGATTCTACGACAAGGTACTTTCTTTGCATGAGGATTCAACAACCCCTGTGGCTAACCCTCTGCTTGCATTTACTCTCATCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000524388.5
ENST00000525968.1
CDS-3UTR CAA 90 bp TCTTTCAGATACATACCTGGGAGTGGAATAACTGGGTCAGATGACAGTTCTATGTACTCATGTATCCACTaGTTGGCCACCCACTTATCT +
Preference number: 5 (lower is better)
Translates to: SFRYIPGSGITGSDDSSMYSCIH*LATHLS
Trigger: AGATAAGTGGGTGGCCAACAAGTGGATACATGAGTA...CATAGAACTGTCATCTGACCCAGTTATTCCACTCCCAGGTATGTATCTGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532689.6
CDS-3UTR CAA 90 bp CCTAGGAAGTGTGAAGTGGTTCCTTATTTGCATTTCAAGACCCAGCTTTTGGCTGAAGTGGTTCCTTATTaGCATTTCAAGACCCAGCTT +
Preference number: 5 (lower is better)
Translates to: PRKCEVVPYLHFKTQLLAEVVPY*HFKTQL
Trigger: AAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTC...AGCCAAAAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTCACACTTCCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524388.5
ENST00000532689.6
CDS-3UTR CAA 90 bp ACAGCTATCATTCCATTCTTTCAGATACATACCTGGGAGTGGAATAACTGGGTCGAAGTGGTTCCTTATTaGCATTTCAAGACCCAGCTT +
Preference number: 5 (lower is better)
Translates to: TAIIPFFQIHTWEWNNWVEVVPY*HFKTQL
Trigger: AAGCTGGGTCTTGAAATGCAAATAAGGAACCACTTC...GACCCAGTTATTCCACTCCCAGGTATGTATCTGAAAGAATGGAATGATAGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532689.6
CDS TCA 90 bp AACTTACATACAATGATATACACAGGTCTCAAGTGGACCATTTGGTaGGTTTTGACAAATGCATACAGCCACATGTACCACGTCCCTAAC +
Preference number: 5 (lower is better)
Translates to: NLHTMIYTGLKWTIW*VLTNAYSHMYHVPN
Trigger: GTTAGGGACGTGGTACATGTGGCTGTATGCATTTGTCAAAACTCACCAAATGGTCCACTTGAGACCTGTGTATATCATTGTATGTAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531716.1
CDS CCA 72 bp CGCCGAGAACGTGTCGCCCCGAGCCGCAGCCCTTTCTaGGTCTCCTGTCCCGAGCGCCAGCACCGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: RRERVAPSRSPF*VSCPERQHRQQ
Trigger: CTGCTGGCGGTGCTGGCGCTCGGGACAGGAGACCCAGAAAGGGCTGCGGCTCGGGGCGACACGTTCTCGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000524388.5
ENST00000525968.1
CDS CCA 72 bp CAGGGCCCTTGCTGCTCCCTCAAGGTCCTCAAAGGCTaGAAGGTCTTGCTCCACCTTCTCATAGCCATCCTT +
Preference number: 6 (lower is better)
Translates to: QGPCCSLKVLKG*KVLLHLLIAIL
Trigger: AAGGATGGCTATGAGAAGGTGGAGCAAGACCTTCCAGCCTTTGAGGACCTTGAGGGAGCAGCAAGGGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000524388.5
ENST00000525968.1
CDS TCA 72 bp CCCTGTGAAGTTCAGTGTGCATGTAGGAGGGGCTTGTaGGATTATGCCTTGTCTCTGACGGTGGAGCTGATC +
Preference number: 6 (lower is better)
Translates to: PCEVQCACRRGL*DYALSLTVELI
Trigger: GATCAGCTCCACCGTCAGAGACAAGGCATAATCTCACAAGCCCCTCCTACATGCACACTGAACTTCACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540363.1
CDS CAA 90 bp GCCTCCAGACTATGTACCACATTCCTCCAGTCAGACTGCAGGCGTTaGATGAGAGTAAATGCAAGCAGAGGGTTAGCCACAGGGGTTGTT +
Preference number: 6 (lower is better)
Translates to: ASRLCTTFLQSDCRR*MRVNASRGLATGVV
Trigger: AACAACCCCTGTGGCTAACCCTCTGCTTGCATTTACTCTCATCAAACGCCTGCAGTCTGACTGGAGGAATGTGGTACATAGTCTGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000524388.5
CDS TCA 72 bp ACCATCACCTGTAGAGAAGAAACTCCCGAGAGAGGCTaGGGGCACACGAAACATTTCCTGCCCGGAAATAAG +
Preference number: 6 (lower is better)
Translates to: TITCREETPERG*GHTKHFLPGNK
Trigger: CTTATTTCCGGGCAGGAAATGTTTCGTGTGCCCTCAGCCTCTCTCGGGAGTTTCTTCTCTACAGGTGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524388.5
CDS GCA 72 bp GCCTCCAGACTATGTACCACATTCCTCCAGTCAGACTaGAGGCGTTTGATGAGAGTAAATGCAAGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: ASRLCTTFLQSD*RRLMRVNASRG
Trigger: CCCTCTGCTTGCATTTACTCTCATCAAACGCCTGCAGTCTGACTGGAGGAATGTGGTACATAGTCTGGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000524388.5
CDS CCA 72 bp TCTCATAGCCATCCTTCAGAGCTCGGATGTTCTCACTaGCCTCCAGACTATGTACCACATTCCTCCAGTCAG +
Preference number: 6 (lower is better)
Translates to: SHSHPSELGCSH*PPDYVPHSSSQ
Trigger: CTGACTGGAGGAATGTGGTACATAGTCTGGAGGCCAGTGAGAACATCCGAGCTCTGAAGGATGGCTATGAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000524388.5
CDS CAA 90 bp ATAGCCATCCTTCAGAGCACATTCCTCCAGTCAGACTGCAGGCGTTaGATGAGAGTAAATGCAAGCAGAGGGTTAGCCACAGGGGTTGTT +
Preference number: 6 (lower is better)
Translates to: IAILQSTFLQSDCRR*MRVNASRGLATGVV
Trigger: AACAACCCCTGTGGCTAACCCTCTGCTTGCATTTACTCTCATCAAACGCCTGCAGTCTGACTGGAGGAATGTGCTCTGAAGGATGGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525968.1
CDS CAA 90 bp AGAGTGGCCAGATTCGAAATCTGGAGTCTGCCCGTGTCTCAATGGTaGGCCAAGTCAAACAGTAGGTCTTACTCTTCCCCCTTGGTCTTA +
Preference number: 6 (lower is better)
Translates to: RVARFEIWSLPVSQW*AKSNSRSYSSPLVL
Trigger: TAAGACCAAGGGGGAAGAGTAAGACCTACTGTTTGACTTGGCCAACCATTGAGACACGGGCAGACTCCAGATTTCGAATCTGGCCACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540363.1
CDS GCA 72 bp ATAGCCATCCTTCAGAGCACATTCCTCCAGTCAGACTaGAGGCGTTTGATGAGAGTAAATGCAAGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: IAILQSTFLQSD*RRLMRVNASRG
Trigger: CCCTCTGCTTGCATTTACTCTCATCAAACGCCTGCAGTCTGACTGGAGGAATGTGCTCTGAAGGATGGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525968.1
CDS GCA 72 bp CAGTGTGAAGAGTGGCCAGATTCGAAATCTGGAGTCTaGCCGTGTCTCAATGGTTGGCCAAGTCAAACAGTA +
Preference number: 6 (lower is better)
Translates to: QCEEWPDSKSGV*PCLNGWPSQTV
Trigger: TACTGTTTGACTTGGCCAACCATTGAGACACGGGCAGACTCCAGATTTCGAATCTGGCCACTCTTCACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540363.1
CDS CCA 72 bp GATTCGAAATCTGGAGTCTGCCCGTGTCTCAATGGTTaGCCAAGTCAAACAGTAGGTCTTACTCTTCCCCCT +
Preference number: 6 (lower is better)
Translates to: DSKSGVCPCLNG*PSQTVGLTLPP
Trigger: AGGGGGAAGAGTAAGACCTACTGTTTGACTTGGCCAACCATTGAGACACGGGCAGACTCCAGATTTCGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540363.1
CDS CCA 72 bp GCCAGATTCGAAATCTGGAGTCTGCCCGTGTCTCAATaGTTGGCCAAGTCAAACAGTAGGTCTTACTCTTCC +
Preference number: 6 (lower is better)
Translates to: ARFEIWSLPVSQ*LAKSNSRSYSS
Trigger: GGAAGAGTAAGACCTACTGTTTGACTTGGCCAACCATTGAGACACGGGCAGACTCCAGATTTCGAATCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540363.1
CDS CAA 72 bp CTTCAGAGCACATTCCTCCAGTCAGACTGCAGGCGTTaGATGAGAGTAAATGCAAGCAGAGGGTTAGCCACA +
Preference number: 6 (lower is better)
Translates to: LQSTFLQSDCRR*MRVNASRGLAT
Trigger: TGTGGCTAACCCTCTGCTTGCATTTACTCTCATCAAACGCCTGCAGTCTGACTGGAGGAATGTGCTCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525968.1
CDS CAA 72 bp AGATTCGAAATCTGGAGTCTGCCCGTGTCTCAATGGTaGGCCAAGTCAAACAGTAGGTCTTACTCTTCCCCC +
Preference number: 6 (lower is better)
Translates to: RFEIWSLPVSQW*AKSNSRSYSSP
Trigger: GGGGGAAGAGTAAGACCTACTGTTTGACTTGGCCAACCATTGAGACACGGGCAGACTCCAGATTTCGAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540363.1
CDS CAA 72 bp CTATGTACCACATTCCTCCAGTCAGACTGCAGGCGTTaGATGAGAGTAAATGCAAGCAGAGGGTTAGCCACA +
Preference number: 6 (lower is better)
Translates to: LCTTFLQSDCRR*MRVNASRGLAT
Trigger: TGTGGCTAACCCTCTGCTTGCATTTACTCTCATCAAACGCCTGCAGTCTGACTGGAGGAATGTGGTACATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000524388.5
CDS CAA 90 bp CTTACACTCCTGAACTCCAGGCATGTGAAGATGAAAGAGAAATTCTaGGCGGGTTCTCAGGACACTCACCCATGGTTCTGCAAGTTCTCT +
Preference number: 6 (lower is better)
Translates to: LTLLNSRHVKMKEKF*AGSQDTHPWFCKFS
Trigger: AGAGAACTTGCAGAACCATGGGTGAGTGTCCTGAGAACCCGCCAAGAATTTCTCTTTCATCTTCACATGCCTGGAGTTCAGGAGTGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531716.1
CDS TCA 72 bp AGTAAATGCAAGCAGAGGGTTAGCCACAGGGGTTGTTaGATCCTCATGCAAAGAAAGTACCTTGTCGTAGAA +
Preference number: 6 (lower is better)
Translates to: SKCKQRVSHRGC*ILMQRKYLVVE
Trigger: TTCTACGACAAGGTACTTTCTTTGCATGAGGATTCAACAACCCCTGTGGCTAACCCTCTGCTTGCATTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331597.9
ENST00000427714.2
ENST00000524388.5
ENST00000525968.1
CDS TCA 72 bp CCACCATGGACTAGTTTTATGGAATGGTTGGCATTCTaGACTCCTTGGCTCTTTGAGGTGTCTAGTTGTTCA +
Preference number: 6 (lower is better)
Translates to: PPWTSFMEWLAF*TPWLFEVSSCS
Trigger: TGAACAACTAGACACCTCAAAGAGCCAAGGAGTTCAGAATGCCAACCATTCCATAAAACTAGTCCATGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531716.1
CDS TCA 72 bp TATACACAGGTCTCAAGTGGACCATTTGGTGAGTTTTaGCAAATGCATACAGCCACATGTACCACGTCCCTA +
Preference number: 6 (lower is better)
Translates to: YTQVSSGPFGEF*QMHTATCTTSL
Trigger: TAGGGACGTGGTACATGTGGCTGTATGCATTTGTCAAAACTCACCAAATGGTCCACTTGAGACCTGTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531716.1
CDS CAA 90 bp GGACTAGTTTTATGGAATGGTTGGCATTCTGAACTCCTTGGCTCTTaGAGGTGTCTAGTTGTTCAGGTTGCCTATTCTTACACTCCTGAA +
Preference number: 6 (lower is better)
Translates to: GLVLWNGWHSELLGS*RCLVVQVAYSYTPE
Trigger: TTCAGGAGTGTAAGAATAGGCAACCTGAACAACTAGACACCTCAAAGAGCCAAGGAGTTCAGAATGCCAACCATTCCATAAAACTAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531716.1
CDS TCA 72 bp CATACAGCCACATGTACCACGTCCCTAACAAGATATTaGGAGCACATTTTCAATACCCCAGAGAATCCTCTT +
Preference number: 6 (lower is better)
Translates to: HTATCTTSLTRY*EHIFNTPENPL
Trigger: AAGAGGATTCTCTGGGGTATTGAAAATGTGCTCTCAATATCTTGTTAGGGACGTGGTACATGTGGCTGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531716.1
CDS CAA 72 bp TTATGGAATGGTTGGCATTCTGAACTCCTTGGCTCTTaGAGGTGTCTAGTTGTTCAGGTTGCCTATTCTTAC +
Preference number: 6 (lower is better)
Translates to: LWNGWHSELLGS*RCLVVQVAYSY
Trigger: GTAAGAATAGGCAACCTGAACAACTAGACACCTCAAAGAGCCAAGGAGTTCAGAATGCCAACCATTCCATAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531716.1
CDS CAA 90 bp TTGACAAATGCATACAGCCACATGTACCACGTCCCTAACAAGATATaGAGAGCACATTTTCAATACCCCAGAGAATCCTCTTGTACATCA +
Preference number: 6 (lower is better)
Translates to: LTNAYSHMYHVPNKI*RAHFQYPRESSCTS
Trigger: TGATGTACAAGAGGATTCTCTGGGGTATTGAAAATGTGCTCTCAATATCTTGTTAGGGACGTGGTACATGTGGCTGTATGCATTTGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531716.1