RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for P4HA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000072682

Ensembl transcript IDs: ENST00000166534.8, ENST00000360568.8, ENST00000379086.5, ENST00000379100.7, ENST00000379104.7, ENST00000395164.5, ENST00000401867.5, ENST00000416053.5, ENST00000417528.5, ENST00000418055.5, ENST00000428369.6, ENST00000428841.1, ENST00000431054.5, ENST00000439698.5, ENST00000453286.5, ENST00000467587.1, ENST00000471826.1, ENST00000474628.1, ENST00000478055.1, ENST00000506807.1

Found 813 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTCCAGGGCACGGTGCAGATCACCCAACTGGAAGACAGCATAGCTaGGGTAGTCCAGCACCTGTGACTTGGTTGTGGTGGCCTCCTCCC +
Preference number: 1 (lower is better)
Translates to: APGHGADHPTGRQHS*GSPAPVTWLWWPPP
Trigger: GGGAGGAGGCCACCACAACCAAGTCACAGGTGCTGGACTACCTCAGCTATGCTGTCTTCCAGTTGGGTGATCTGCACCGTGCCCTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR TCA 90 bp TGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCACAGGCTaGATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGT +
Preference number: 1 (lower is better)
Translates to: CSHFDPSLGARDGTG*MEGLGLQSHRSRPS
Trigger: ACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGCCTGTGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR CCA 90 bp GCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCACAGGCTGAATaGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGG +
Preference number: 1 (lower is better)
Translates to: ATLILALGPGMAQAE*KGWDFSHTGVALVW
Trigger: CCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGCCTGTGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR TCA 90 bp CTTCCTCTAGCCAGGAGCTTTTGGAAACCCGGTAGCTGGCGACAGTaGGGACTCCTGTCTTGGGATCACGAACGGTGGCTCGTGCAAGTT +
Preference number: 1 (lower is better)
Translates to: LPLARSFWKPGSWRQ*GLLSWDHERWLVQV
Trigger: AACTTGCACGAGCCACCGTTCGTGATCCCAAGACAGGAGTCCTCACTGTCGCCAGCTACCGGGTTTCCAAAAGCTCCTGGCTAGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR CCA 90 bp AGACAGGCATCTTCTTGCTGTGTGTTCGCATGGCAGAAAGAGGGCTaGGATCTCTTCATAAGGGCACTAATCCCACTCACGTGGGCTCCA +
Preference number: 1 (lower is better)
Translates to: RQASSCCVFAWQKEG*DLFIRALIPLTWAP
Trigger: TGGAGCCCACGTGAGTGGGATTAGTGCCCTTATGAAGAGATCCCAGCCCTCTTTCTGCCATGCGAACACACAGCAAGAAGATGCCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
3UTR GCA 90 bp CGTAAACATCCCTCTCAGGCAGGTAGTCCACAGGCCTCTCATAGATaGCTTCTGGGGTTGCTAGCTCAGCTTCTGTCTGATTTGTTAACG +
Preference number: 1 (lower is better)
Translates to: RKHPSQAGSPQASHR*LLGLLAQLLSDLLT
Trigger: CGTTAACAAATCAGACAGAAGCTGAGCTAGCAACCCCAGAAGGCATCTATGAGAGGCCTGTGGACTACCTGCCTGAGAGGGATGTTTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR CCA 90 bp GAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATaGTCTCCCTCTGCTCCAGACAAACATTCATTTCTCCAAAAATCA +
Preference number: 1 (lower is better)
Translates to: EWKGWDFSHTGVALV*SPSAPDKHSFLQKS
Trigger: TGATTTTTGGAGAAATGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR GCA 90 bp ACCTGTAACAATTCTGCAGTCTTTACTGTTAACCCTGTGATATGCTaGATCCGACGATTTACTCGGGCCACAACAGGGTCATCATCTTCC +
Preference number: 1 (lower is better)
Translates to: TCNNSAVFTVNPVIC*IRRFTRATTGSSSS
Trigger: GGAAGATGATGACCCTGTTGTGGCCCGAGTAAATCGTCGGATGCAGCATATCACAGGGTTAACAGTAAAGACTGCAGAATTGTTACAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR GCA 90 bp GCAACCTGTAACAATTCTGCAGTCTTTACTGTTAACCCTGTGATATaGTGCATCCGACGATTTACTCGGGCCACAACAGGGTCATCATCT +
Preference number: 1 (lower is better)
Translates to: ATCNNSAVFTVNPVI*CIRRFTRATTGSSS
Trigger: AGATGATGACCCTGTTGTGGCCCGAGTAAATCGTCGGATGCAGCATATCACAGGGTTAACAGTAAAGACTGCAGAATTGTTACAGGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR TCA 90 bp AATTTGCAACCTGTAACAATTCTGCAGTCTTTACTGTTAACCCTGTaGTATGCTGCATCCGACGATTTACTCGGGCCACAACAGGGTCAT +
Preference number: 1 (lower is better)
Translates to: NLQPVTILQSLLLTL*YAASDDLLGPQQGH
Trigger: ATGACCCTGTTGTGGCCCGAGTAAATCGTCGGATGCAGCATATCACAGGGTTAACAGTAAAGACTGCAGAATTGTTACAGGTTGCAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR TCA 90 bp GGAGACAAAGAGAAACTATTTACCCTACTTTCCAGAAAAGGACACTaGCACTTAGAGGGAACACAAGTGTTGAAACCAGGTCTGAAATCC +
Preference number: 1 (lower is better)
Translates to: GDKEKLFTLLSRKGH*HLEGTQVLKPGLKS
Trigger: GGATTTCAGACCTGGTTTCAACACTTGTGTTCCCTCTAAGTGTCAGTGTCCTTTTCTGGAAAGTAGGGTAAATAGTTTCTCTTTGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
3UTR CCA 90 bp CCATACATTGAATTAAAAACATTTATTTCTCATGGTTATGGGAACTaGAAAGTCCGAGATCAAGATGCTAGTAGGTTTGTTTCTGGTAAG +
Preference number: 1 (lower is better)
Translates to: PYIELKTFISHGYGN*KVRDQDASRFVSGK
Trigger: CTTACCAGAAACAAACCTACTAGCATCTTGATCTCGGACTTTCCAGTTCCCATAACCATGAGAAATAAATGTTTTTAATTCAATGTATGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
3UTR-3UTR TCA 90 bp CCGGTAGCTGGCGACAGTGAGGACTCCTGTCTTGGGATCACGAACGGTGGCTCGCACGTTGACATGGGCTaGAGGACCAGGAAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: PVAGDSEDSCLGITNGGSHVDMG*RTRKGK
Trigger: CTTCCCCTTCCTGGTCCTTCAGCCCATGTCAACGTG...CGAGCCACCGTTCGTGATCCCAAGACAGGAGTCCTCACTGTCGCCAGCTACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR TCA 90 bp GTCCCACTCGTCCTCCTCTTTGAAGGGGGCAATGAGCAGCTGTGGGGCCCTGTTGTAGTCCAGCACCTGTaGCTTGGTTGTGGTGGCCTC +
Preference number: 2 (lower is better)
Translates to: VPLVLLFEGGNEQLWGPVVVQHL*LGCGGL
Trigger: GAGGCCACCACAACCAAGTCACAGGTGCTGGACTAC...AACAGGGCCCCACAGCTGCTCATTGCCCCCTTCAAAGAGGAGGACGAGTGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR TCA 90 bp CCACAAGCACAGGGCAGGCAGCATGTCTTGTTCGGTAGTCACCTTCCCCGCTCCTACGGGGTGTCAGTTTaGCACCCTCCCCACGACAGA +
Preference number: 2 (lower is better)
Translates to: PQAQGRQHVLFGSHLPRSYGVSV*HPPHDR
Trigger: TCTGTCGTGGGGAGGGTGTCAAACTGACACCCCGTA...GGAGCGGGGAAGGTGACTACCGAACAAGACATGCTGCCTGCCCTGTGCTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR GCA 90 bp CTGTCCCACTCGTCCTCCTCTTTGAAGGGGGCAATGAGCAGCTGTGGGGCCCTGTCCCCGGCATCAAGCTaGTTTAGCACCTGCTCCATC +
Preference number: 2 (lower is better)
Translates to: LSHSSSSLKGAMSSCGALSPASS*FSTCSI
Trigger: GATGGAGCAGGTGCTAAAGCAGCTTGATGCCGGGGA...CAGGGCCCCACAGCTGCTCATTGCCCCCTTCAAAGAGGAGGACGAGTGGGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR CAA 90 bp TGGAGACCCACTTGCAGCCCACAAGCACAGGGCAGGCAGCATGTCTaGTTCGGTAGTCACCTTCCCCGCTCCGCAAGAGGTTGTACCAGA +
Preference number: 2 (lower is better)
Translates to: WRPTCSPQAQGRQHV*FGSHLPRSARGCTR
Trigger: TCTGGTACAACCTCTTGCGGAGCGGGGAAGGTGACTACCGAACAAGACATGCTGCCTGCCCTGTGCTTGTGGGCTGCAAGTGGGTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR TCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCACGTTGACATGGGCTaGAGGACCAGGAAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: KGWDFSHTGVALVWSPSAHVDMG*RTRKGK
Trigger: CTTCCCCTTCCTGGTCCTTCAGCCCATGTCAACGTG...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR-3UTR GCA 90 bp TACCGCAGATTCCCTCCAGCTCGTTCGTGGCTTGGGTCAAGGGAGAGCAGGCGGATCCACACTCAGCATTaGCTGGTACTTGGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: YRRFPPARSWLGSRESRRIHTQH*LVLGSW
Trigger: CCAGGAACCAAGTACCAGGCAATGCTGAGTGTGGAT...CCGCCTGCTCTCCCTTGACCCAAGCCACGAACGAGCTGGAGGGAATCTGCGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAGGAGTCGCCCTAGTATaGTCTCCCTCTGCTCCAGAC +
Preference number: 2 (lower is better)
Translates to: TANSAAATLILALGPGMAGVALV*SPSAPD
Trigger: GTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCC...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR-3UTR CCA 90 bp TTCGGTAGTCACCTTCCCCGCTCCGCAAGAGGTTGTACCAGAACACAGCTGTACCCAGCACCTGTGACTTaGTTGTGGTGGCCTCCTCCC +
Preference number: 2 (lower is better)
Translates to: FGSHLPRSARGCTRTQLYPAPVT*LWWPPP
Trigger: GGGAGGAGGCCACCACAACCAAGTCACAGGTGCTGG...GTACAGCTGTGTTCTGGTACAACCTCTTGCGGAGCGGGGAAGGTGACTACCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR TCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAACACGTTGACATGGGCTaGAGGACCAGGAAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQHVDMG*RTRKGK
Trigger: CTTCCCCTTCCTGGTCCTTCAGCCCATGTCAACGTG...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR-3UTR CCA 90 bp AAGCACAGGGCAGGCAGCATGTCTTGTTCGGTAGTCACCTTCCCCGCTCCGCAATCTGTCACGTTGACATaGGCTGAAGGACCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: KHRAGSMSCSVVTFPAPQSVTLT*AEGPGR
Trigger: CCTTCCTGGTCCTTCAGCCCATGTCAACGTGACAGA...TTGCGGAGCGGGGAAGGTGACTACCGAACAAGACATGCTGCCTGCCCTGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CCA 90 bp TACCGCAGATTCCCTCCAGCTCGTTCGTGGCTTGGGTCAAGGGAGAGCAGGCGGCTGGTACTTGGTTCCTaGAAGTTCCCCTCTGGAAAT +
Preference number: 2 (lower is better)
Translates to: YRRFPPARSWLGSRESRRLVLGS*KFPSGN
Trigger: ATTTCCAGAGGGGAACTTCCAGGAACCAAGTACCAG...CCGCCTGCTCTCCCTTGACCCAAGCCACGAACGAGCTGGAGGGAATCTGCGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CCA 90 bp AGGCCGCTGTCAAAAGGTCGCCTAGAGAAGTCGAAGTGCGGTTCATACTGTCCTCCTGTGACTTGGTTGTaGTGGCCTCCTCCCCGGCAT +
Preference number: 2 (lower is better)
Translates to: RPLSKGRLEKSKCGSYCPPVTWL*WPPPRH
Trigger: ATGCCGGGGAGGAGGCCACCACAACCAAGTCACAGG...AGGACAGTATGAACCGCACTTCGACTTCTCTAGGCGACCTTTTGACAGCGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CCA 90 bp AGGCCGCTGTCAAAAGGTCGCCTAGAGAAGTCGAAGTGCGGTTCATACTGTCCTCCTCCAGCTCGTTCGTaGCTTGGGTCAAGGGAGAGC +
Preference number: 2 (lower is better)
Translates to: RPLSKGRLEKSKCGSYCPPPARS*LGSRES
Trigger: GCTCTCCCTTGACCCAAGCCACGAACGAGCTGGAGG...AGGACAGTATGAACCGCACTTCGACTTCTCTAGGCGACCTTTTGACAGCGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR TCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTCACGTTGACATGGGCTaGAGGACCAGGAAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLHVDMG*RTRKGK
Trigger: CTTCCCCTTCCTGGTCCTTCAGCCCATGTCAACGTG...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR-3UTR GCA 90 bp CCAATAACTGCTCAAAGTACCGCAGATTCCCTCCAGCTCGTTCGTGGCTTGGGTAGCTCCAGGGCACGGTaGAGATCACCCAACTGGAAG +
Preference number: 2 (lower is better)
Translates to: PITAQSTADSLQLVRGLGSSRAR*RSPNWK
Trigger: CTTCCAGTTGGGTGATCTGCACCGTGCCCTGGAGCT...ACCCAAGCCACGAACGAGCTGGAGGGAATCTGCGGTACTTTGAGCAGTTATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTTCTGTCACGTTGACATaGGCTGAAGGACCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: KGWDFSHTGVALVWSPSASVTLT*AEGPGR
Trigger: CCTTCCTGGTCCTTCAGCCCATGTCAACGTGACAGA...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR-3UTR CCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAATCTGTCACGTTGACATaGGCTGAAGGACCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQSVTLT*AEGPGR
Trigger: CCTTCCTGGTCCTTCAGCCCATGTCAACGTGACAGA...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR-3UTR CCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAGCTGAATGGAAGGGCTaGGACTTCAGTCACACAGGA +
Preference number: 2 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQAEWKG*DFSHTG
Trigger: TCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR-3UTR TCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCAAGGTGTCTGTCACGTTaGCATGGGCTGAAGGACCAG +
Preference number: 2 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSRCLSR*HGLKDQ
Trigger: CTGGTCCTTCAGCCCATGTCAACGTGACAGACACCT...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR-3UTR CCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTTCTGTCACGTTGACATaGGCTGAAGGACCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLSVTLT*AEGPGR
Trigger: CCTTCCTGGTCCTTCAGCCCATGTCAACGTGACAGA...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR-3UTR CCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGGGAGTCGCCCTAGTATaGTCTCCCTCTGCTCCAGAC +
Preference number: 2 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLGVALV*SPSAPD
Trigger: GTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCC...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR-3UTR CCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTGCTGAATGGAAGGGCTaGGACTTCAGTCACACAGGA +
Preference number: 2 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLAEWKG*DFSHTG
Trigger: TCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR-3UTR CCA 90 bp GAGGCTCTCGTAAACATCCCTCTCAGGCAGGTAGTCCACAGGCCTCTCATAGATGCTGAATGGAAGGGCTaGGACTTCAGTCACACAGGA +
Preference number: 2 (lower is better)
Translates to: EALVNIPLRQVVHRPLIDAEWKG*DFSHTG
Trigger: TCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC...ATCTATGAGAGGCCTGTGGACTACCTGCCTGAGAGGGATGTTTACGAGAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAAGCTCGTTCGTGGCTTaGGTCAAGGGAGAGCAGGCG +
Preference number: 2 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGSSFVA*VKGEQA
Trigger: CGCCTGCTCTCCCTTGACCCAAGCCACGAACGAGCT...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCATCTGTCACGTTGACATaGGCTGAAGGACCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSSVTLT*AEGPGR
Trigger: CCTTCCTGGTCCTTCAGCCCATGTCAACGTGACAGA...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR-3UTR CCA 90 bp GTGGCTCGTGCAAGTTTAGGTTTTGCGATCTCCTTGATCCTCTCGATTTCCTCAGGAGTCGCCCTAGTATaGTCTCCCTCTGCTCCAGAC +
Preference number: 2 (lower is better)
Translates to: VARASLGFAISLILSISSGVALV*SPSAPD
Trigger: GTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCC...TGAGGAAATCGAGAGGATCAAGGAGATCGCAAAACCTAAACTTGCACGAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR TCA 90 bp AGGGGAAGGACAGAAAAGGATGTCAGTCAACTTCTGTTGATCCACAAGGTCTCAAGGGATGGCACAGGCTaGATGGAAGGGCTGGGACTT +
Preference number: 2 (lower is better)
Translates to: RGRTEKDVSQLLLIHKVSRDGTG*MEGLGL
Trigger: AAGTCCCAGCCCTTCCATTCAGCCTGTGCCATCCCT...TGAGACCTTGTGGATCAACAGAAGTTGACTGACATCCTTTTCTGTCCTTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGGCTGAATGGAAGGGCTaGGACTTCAGTCACACAGGA +
Preference number: 2 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLAEWKG*DFSHTG
Trigger: TCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR-3UTR GCA 90 bp TATGCTGCATCCGACGATTTACTCGGGCCACAACAGGGTCATCATCTTCCTCTAAGCTGCTTTAGCACCTaGTCCATCCACAACACCGTA +
Preference number: 2 (lower is better)
Translates to: YAASDDLLGPQQGHHLPLSCFST*SIHNTV
Trigger: TACGGTGTTGTGGATGGAGCAGGTGCTAAAGCAGCT...TAGAGGAAGATGATGACCCTGTTGTGGCCCGAGTAAATCGTCGGATGCAGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR GCA 90 bp GTGGCTCGTGCAAGTTTAGGTTTTGCGATCTCCTTGATCCTCTCGATTTCCTCACAGGCCTCTCATAGATaGCTTCTGGGGTTGCTAGCT +
Preference number: 2 (lower is better)
Translates to: VARASLGFAISLILSISSQASHR*LLGLLA
Trigger: AGCTAGCAACCCCAGAAGGCATCTATGAGAGGCCTG...TGAGGAAATCGAGAGGATCAAGGAGATCGCAAAACCTAAACTTGCACGAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CCA 90 bp AGAGGGAACACAAGTGTTGAAACCAGGTCTGAAATCCAAGACCCAAGATGCTTTGGAGTCGCCCTAGTATaGTCTCCCTCTGCTCCAGAC +
Preference number: 2 (lower is better)
Translates to: RGNTSVETRSEIQDPRCFGVALV*SPSAPD
Trigger: GTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCC...AAAGCATCTTGGGTCTTGGATTTCAGACCTGGTTTCAACACTTGTGTTCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
3UTR-3UTR TCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGAGGGATGGCACAGGCTaGATGGAAGGGCTGGGACTT +
Preference number: 2 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRRDGTG*MEGLGL
Trigger: AAGTCCCAGCCCTTCCATTCAGCCTGTGCCATCCCT...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
3UTR-3UTR GCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTAGTATGGTCTCCCTCTaGTCCAGACAAACATTCATT +
Preference number: 2 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLSMVSL*SRQTFI
Trigger: AATGAATGTTTGTCTGGAGCAGAGGGAGACCATACT...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR-3UTR GCA 90 bp GAGGCTCTCGTAAACATCCCTCTCAGGCAGGTAGTCCACAGGCCTCTCATAGATAGTATGGTCTCCCTCTaGTCCAGACAAACATTCATT +
Preference number: 2 (lower is better)
Translates to: EALVNIPLRQVVHRPLIDSMVSL*SRQTFI
Trigger: AATGAATGTTTGTCTGGAGCAGAGGGAGACCATACT...ATCTATGAGAGGCCTGTGGACTACCTGCCTGAGAGGGATGTTTACGAGAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAACACTCAGCATTGCCTaGTACTTGGTTCCTGGAAGT +
Preference number: 2 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGTLSIA*YLVPGS
Trigger: ACTTCCAGGAACCAAGTACCAGGCAATGCTGAGTGT...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR TCA 90 bp AGCATTACAATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTAGGGATGGCACAGGCTaGATGGAAGGGCTGGGACTT +
Preference number: 2 (lower is better)
Translates to: SITIMNTCAMFSGRQRETRDGTG*MEGLGL
Trigger: AAGTCCCAGCCCTTCCATTCAGCCTGTGCCATCCCT...AGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATTGTAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
3UTR-3UTR GCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGAGTATGGTCTCCCTCTaGTCCAGACAAACATTCATT +
Preference number: 2 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLSMVSL*SRQTFI
Trigger: AATGAATGTTTGTCTGGAGCAGAGGGAGACCATACT...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR-3UTR CCA 90 bp CTTCCAGTCTTAAAAATACTCCAAGTAAGGCTCTTTAAGGCTTCTGGTAGGGACGCTGAATGGAAGGGCTaGGACTTCAGTCACACAGGA +
Preference number: 2 (lower is better)
Translates to: LPVLKILQVRLFKASGRDAEWKG*DFSHTG
Trigger: TCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC...GTCCCTACCAGAAGCCTTAAAGAGCCTTACTTGGAGTATTTTTAAGACTGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
3UTR-3UTR GCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAAGTATGGTCTCCCTCTaGTCCAGACAAACATTCATT +
Preference number: 2 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGSMVSL*SRQTFI
Trigger: AATGAATGTTTGTCTGGAGCAGAGGGAGACCATACT...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR-3UTR GCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGAATCATGAACACATGTaGTATGTTCTCTGGGAGACA +
Preference number: 2 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLNHEHM*YVLWET
Trigger: TGTCTCCCAGAGAACATAGCACATGTGTTCATGATT...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
3UTR-3UTR TCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGAGAACTTTGGTTCACTaGAACATCTCACACCTAAAA +
Preference number: 2 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLRTLVH*NISHLK
Trigger: TTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCT...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
3UTR-3UTR TCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAACAGCATTACAATCATaGACACATGTGCTATGTTCT +
Preference number: 2 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGTALQS*THVLCS
Trigger: AGAACATAGCACATGTGTTCATGATTGTAATGCTGT...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
3UTR-3UTR CCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTGCATTGCCTGGTACTTaGTTCCTGGAAGTTCCCCTC +
Preference number: 2 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCALPGT*FLEVPL
Trigger: GAGGGGAACTTCCAGGAACCAAGTACCAGGCAATGC...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR GCA 90 bp AATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTATTTACCCTATCCAGACTCTGCCTaGATGAAGGTGATGCATAGG +
Preference number: 2 (lower is better)
Translates to: NHEHMCYVLWETKRNYLPYPDSA*MKVMHR
Trigger: CCTATGCATCACCTTCATGCAGGCAGAGTCTGGATA...GGGTAAATAGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
3UTR-3UTR TCA 90 bp ACTCCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGTCCAGAAAAGGACACTaGCACTTAGAGGGAACACAA +
Preference number: 2 (lower is better)
Translates to: TPGENVYNHLGIHYLVKLSRKGH*HLEGTQ
Trigger: TTGTGTTCCCTCTAAGTGTCAGTGTCCTTTTCTGGA...CAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
3UTR-3UTR GCA 90 bp CCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGGAATCATTATCCAGACTCTaGCTGCATGAAGGTGATGCA +
Preference number: 2 (lower is better)
Translates to: PGENVYNHLGIHYLVKLESLSRL*LHEGDA
Trigger: TGCATCACCTTCATGCAGGCAGAGTCTGGATAATGA...TTCCAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
3UTR-3UTR GCA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTTCATTATCCAGACTCTaGCTGCATGAAGGTGATGCA +
Preference number: 2 (lower is better)
Translates to: LPVLWYSPTISINKTECTSLSRL*LHEGDA
Trigger: TGCATCACCTTCATGCAGGCAGAGTCTGGATAATGA...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
3UTR-3UTR TCA 90 bp AATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTATTTACCCAGAACTTTGGTTCACTaGAACATCTCACACCTAAAA +
Preference number: 2 (lower is better)
Translates to: NHEHMCYVLWETKRNYLPRTLVH*NISHLK
Trigger: TTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCT...GGGTAAATAGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
3UTR-3UTR GCA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTAATCATGAACACATGTaGTATGTTCTCTGGGAGACA +
Preference number: 2 (lower is better)
Translates to: LPVLWYSPTISINKTECTNHEHM*YVLWET
Trigger: TGTCTCCCAGAGAACATAGCACATGTGTTCATGATT...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
3UTR-3UTR TCA 90 bp CCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGGAAACAGCATTACAATCATaGACACATGTGCTATGTTCT +
Preference number: 2 (lower is better)
Translates to: PGENVYNHLGIHYLVKLETALQS*THVLCS
Trigger: AGAACATAGCACATGTGTTCATGATTGTAATGCTGT...TTCCAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
3UTR-3UTR CAA 90 bp AAGCACAGGGCAGGCAGCATGTCTTGTTCGGTAGTCACCTTCCCCGCTCCGCAACTACGGGGTGTCAGTTaGACACCCTCCCCACGACAG +
Preference number: 3 (lower is better)
Translates to: KHRAGSMSCSVVTFPAPQLRGVS*TPSPRQ
Trigger: CTGTCGTGGGGAGGGTGTCAAACTGACACCCCGTAG...TTGCGGAGCGGGGAAGGTGACTACCGAACAAGACATGCTGCCTGCCCTGTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CAA 90 bp AAGCACAGGGCAGGCAGCATGTCTTGTTCGGTAGTCACCTTCCCCGCTCCGCAAAGCTGTGGGGCCCTGTaGCCATGGTGGTACCTACAG +
Preference number: 3 (lower is better)
Translates to: KHRAGSMSCSVVTFPAPQSCGAL*PWWYLQ
Trigger: CTGTAGGTACCACCATGGCAACAGGGCCCCACAGCT...TTGCGGAGCGGGGAAGGTGACTACCGAACAAGACATGCTGCCTGCCCTGTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR TCA 72 bp GCCAGGAGCTTTTGGAAACCCGGTAGCTGGCGACAGTaGGGACTCCTGTCTTGGGATCACGAACGGTGGCTC +
Preference number: 3 (lower is better)
Translates to: ARSFWKPGSWRQ*GLLSWDHERWL
Trigger: GAGCCACCGTTCGTGATCCCAAGACAGGAGTCCTCACTGTCGCCAGCTACCGGGTTTCCAAAAGCTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CAA 90 bp GAGGCTCTCGTAAACATCCCTCTCAGGCAGGTAGTCCACAGGCCTCTCATAGATGCACCTGTGACTTGGTaGTGGTGGCCTCCTCCCCGG +
Preference number: 3 (lower is better)
Translates to: EALVNIPLRQVVHRPLIDAPVTW*WWPPPR
Trigger: CCGGGGAGGAGGCCACCACAACCAAGTCACAGGTGC...ATCTATGAGAGGCCTGTGGACTACCTGCCTGAGAGGGATGTTTACGAGAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CAA 90 bp TTCGGTAGTCACCTTCCCCGCTCCGCAAGAGGTTGTACCAGAACACAGCTGTACTCCAGCACCTGTGACTaGGTTGTGGTGGCCTCCTCC +
Preference number: 3 (lower is better)
Translates to: FGSHLPRSARGCTRTQLYSSTCD*VVVASS
Trigger: GGAGGAGGCCACCACAACCAAGTCACAGGTGCTGGA...GTACAGCTGTGTTCTGGTACAACCTCTTGCGGAGCGGGGAAGGTGACTACCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CAA 90 bp AGGCCGCTGTCAAAAGGTCGCCTAGAGAAGTCGAAGTGCGGTTCATACTGTCCTCAGCTCGTTCGTGGCTaGGGTCAAGGGAGAGCAGGC +
Preference number: 3 (lower is better)
Translates to: RPLSKGRLEKSKCGSYCPQLVRG*GQGRAG
Trigger: GCCTGCTCTCCCTTGACCCAAGCCACGAACGAGCTG...AGGACAGTATGAACCGCACTTCGACTTCTCTAGGCGACCTTTTGACAGCGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CAA 90 bp AAGCACAGGGCAGGCAGCATGTCTTGTTCGGTAGTCACCTTCCCCGCTCCGCAAAGGTACAAAGGCACCTaGCTAGGCGCTAGACAGCTA +
Preference number: 3 (lower is better)
Translates to: KHRAGSMSCSVVTFPAPQRYKGT*LGARQL
Trigger: TAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT...TTGCGGAGCGGGGAAGGTGACTACCGAACAAGACATGCTGCCTGCCCTGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CAA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAGTGAGGACTCCTGTCTaGGGATCACGAACGGTGGCT +
Preference number: 3 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQVRTPV*GSRTVA
Trigger: AGCCACCGTTCGTGATCCCAAGACAGGAGTCCTCAC...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR GCA 72 bp GCGGCCCATCCCAAAGCAGTCATCCACACTCAGCATTaGCTGGTACTTGGTTCCTGGAAGTTCCCCTCTGGA +
Preference number: 3 (lower is better)
Translates to: AAHPKAVIHTQH*LVLGSWKFPSG
Trigger: TCCAGAGGGGAACTTCCAGGAACCAAGTACCAGGCAATGCTGAGTGTGGATGACTGCTTTGGGATGGGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR CCA 72 bp TGGGATCTCTTCATAAGGGCACTAATCCCACTCACGTaGGCTCCATGCTTACGACCTCCCAAGGGCTCCGCA +
Preference number: 3 (lower is better)
Translates to: WDLFIRALIPLT*APCLRPPKGSA
Trigger: TGCGGAGCCCTTGGGAGGTCGTAAGCATGGAGCCCACGTGAGTGGGATTAGTGCCCTTATGAAGAGATCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
3UTR GCA 72 bp GGTAAGGGCCCCCTGGTTCATAGACAGGCATCTTCTTaGTGTGTGTTCGCATGGCAGAAAGAGGGCTGGGAT +
Preference number: 3 (lower is better)
Translates to: GKGPLVHRQASS*CVFAWQKEGWD
Trigger: ATCCCAGCCCTCTTTCTGCCATGCGAACACACAGCAAGAAGATGCCTGTCTATGAACCAGGGGGCCCTTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
3UTR GCA 72 bp CCCTCTCAGGCAGGTAGTCCACAGGCCTCTCATAGATaGCTTCTGGGGTTGCTAGCTCAGCTTCTGTCTGAT +
Preference number: 3 (lower is better)
Translates to: PSQAGSPQASHR*LLGLLAQLLSD
Trigger: ATCAGACAGAAGCTGAGCTAGCAACCCCAGAAGGCATCTATGAGAGGCCTGTGGACTACCTGCCTGAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CAA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTAAGGTGTCTGTCACGTaGACATGGGCTGAAGGACCA +
Preference number: 3 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSKVSVT*TWAEGP
Trigger: TGGTCCTTCAGCCCATGTCAACGTGACAGACACCTT...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR CCA 72 bp ACCTCCCAAGGGCTCCGCATCCTAATATCATCACATTaGGGGTTAAGATTTCAACATATGGGCCGGGCGCGG +
Preference number: 3 (lower is better)
Translates to: TSQGLRILISSH*GLRFQHMGRAR
Trigger: CCGCGCCCGGCCCATATGTTGAAATCTTAACCCCCAATGTGATGATATTAGGATGCGGAGCCCTTGGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
3UTR-3UTR CAA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTAAGGTGTCTGTCACGTaGACATGGGCTGAAGGACCA +
Preference number: 3 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLKVSVT*TWAEGP
Trigger: TGGTCCTTCAGCCCATGTCAACGTGACAGACACCTT...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR-3UTR CAA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGACTTTGATCCTAGCCTaGGGGCCAGGGATGGCACAG +
Preference number: 3 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLTLILA*GPGMAQ
Trigger: CTGTGCCATCCCTGGCCCCAAGGCTAGGATCAAAGT...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR-3UTR CAA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTAGCATTGCCTGGTACTaGGTTCCTGGAAGTTCCCCT +
Preference number: 3 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLSIAWY*VPGSSP
Trigger: AGGGGAACTTCCAGGAACCAAGTACCAGGCAATGCT...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CAA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGATCTGCTGCAGCCACTTaGATCCTAGCCTTGGGGCCA +
Preference number: 3 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGSAAAT*ILALGP
Trigger: TGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGA...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR CCA 72 bp TCTTCTTGCTGTGTGTTCGCATGGCAGAAAGAGGGCTaGGATCTCTTCATAAGGGCACTAATCCCACTCACG +
Preference number: 3 (lower is better)
Translates to: SSCCVFAWQKEG*DLFIRALIPLT
Trigger: CGTGAGTGGGATTAGTGCCCTTATGAAGAGATCCCAGCCCTCTTTCTGCCATGCGAACACACAGCAAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
3UTR CCA 72 bp GATCCACAAGGTCTCAAGAACTCCTGTCCTCGTTCATaGAACCACTTATTGGAGACCCACTTGCAGCCCACA +
Preference number: 3 (lower is better)
Translates to: DPQGLKNSCPRS*NHLLETHLQPT
Trigger: TGTGGGCTGCAAGTGGGTCTCCAATAAGTGGTTCCATGAACGAGGACAGGAGTTCTTGAGACCTTGTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CAA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAAAGGTGTCTGTCACGTaGACATGGGCTGAAGGACCA +
Preference number: 3 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGKVSVT*TWAEGP
Trigger: TGGTCCTTCAGCCCATGTCAACGTGACAGACACCTT...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR CCA 72 bp GTTCATAGACAGGCATCTTCTTGCTGTGTGTTCGCATaGCAGAAAGAGGGCTGGGATCTCTTCATAAGGGCA +
Preference number: 3 (lower is better)
Translates to: VHRQASSCCVFA*QKEGWDLFIRA
Trigger: TGCCCTTATGAAGAGATCCCAGCCCTCTTTCTGCCATGCGAACACACAGCAAGAAGATGCCTGTCTATGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
3UTR-3UTR CAA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGACTTTGATCCTAGCCTaGGGGCCAGGGATGGCACAG +
Preference number: 3 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRTLILA*GPGMAQ
Trigger: CTGTGCCATCCCTGGCCCCAAGGCTAGGATCAAAGT...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
3UTR-3UTR CAA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGTTTTCTAACTTGGTGTaGACACAGGTGCTCCTGCTC +
Preference number: 3 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLFSNLV*TQVLLL
Trigger: GAGCAGGAGCACCTGTGTCAACACCAAGTTAGAAAA...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
3UTR-3UTR CAA 90 bp TCAACTTCTGTTGATCCACAAGGTCTCAAGAACTCCTGTCCTCGTTCATGGAACCATCCACACTCAGCATaGCCTGGTACTTGGTTCCTG +
Preference number: 3 (lower is better)
Translates to: STSVDPQGLKNSCPRSWNHPHSA*PGTWFL
Trigger: CAGGAACCAAGTACCAGGCAATGCTGAGTGTGGATG...GTTCCATGAACGAGGACAGGAGTTCTTGAGACCTTGTGGATCAACAGAAGTTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR TCA 72 bp GGGGAAGGACAGAAAAGGATGTCAGTCAACTTCTGTTaGTCCACAAGGTCTCAAGAACTCCTGTCCTCGTTC +
Preference number: 3 (lower is better)
Translates to: GEGQKRMSVNFC*STRSQELLSSF
Trigger: GAACGAGGACAGGAGTTCTTGAGACCTTGTGGATCAACAGAAGTTGACTGACATCCTTTTCTGTCCTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CAA 90 bp AGGGGAAGGACAGAAAAGGATGTCAGTCAACTTCTGTTGATCCACAAGGTCTCACTATTCCCCTCTGTTTaGAGGCCGCTGTCAAAAGGT +
Preference number: 3 (lower is better)
Translates to: RGRTEKDVSQLLLIHKVSLFPSV*RPLSKG
Trigger: ACCTTTTGACAGCGGCCTCAAAACAGAGGGGAATAG...TGAGACCTTGTGGATCAACAGAAGTTGACTGACATCCTTTTCTGTCCTTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR GCA 72 bp AATTCTGCAGTCTTTACTGTTAACCCTGTGATATGCTaGATCCGACGATTTACTCGGGCCACAACAGGGTCA +
Preference number: 3 (lower is better)
Translates to: NSAVFTVNPVIC*IRRFTRATTGS
Trigger: TGACCCTGTTGTGGCCCGAGTAAATCGTCGGATGCAGCATATCACAGGGTTAACAGTAAAGACTGCAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR GCA 72 bp AACAATTCTGCAGTCTTTACTGTTAACCCTGTGATATaGTGCATCCGACGATTTACTCGGGCCACAACAGGG +
Preference number: 3 (lower is better)
Translates to: NNSAVFTVNPVI*CIRRFTRATTG
Trigger: CCCTGTTGTGGCCCGAGTAAATCGTCGGATGCAGCATATCACAGGGTTAACAGTAAAGACTGCAGAATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR TCA 72 bp CCTGTAACAATTCTGCAGTCTTTACTGTTAACCCTGTaGTATGCTGCATCCGACGATTTACTCGGGCCACAA +
Preference number: 3 (lower is better)
Translates to: PVTILQSLLLTL*YAASDDLLGPQ
Trigger: TTGTGGCCCGAGTAAATCGTCGGATGCAGCATATCACAGGGTTAACAGTAAAGACTGCAGAATTGTTACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
3UTR-3UTR CAA 90 bp AGCATTACAATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTAGGTACAAAGGCACCTaGCTAGGCGCTAGACAGCTA +
Preference number: 3 (lower is better)
Translates to: SITIMNTCAMFSGRQRETRYKGT*LGARQL
Trigger: TAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT...AGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATTGTAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
3UTR-3UTR CAA 90 bp AATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTATTTACCCAGGTACAAAGGCACCTaGCTAGGCGCTAGACAGCTA +
Preference number: 3 (lower is better)
Translates to: NHEHMCYVLWETKRNYLPRYKGT*LGARQL
Trigger: TAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT...GGGTAAATAGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
3UTR-3UTR CAA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAACCCAAGATGCTTTTTaGCTGCTAAAGCATTCATTA +
Preference number: 3 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGTQDAF*LLKHSL
Trigger: TAATGAATGCTTTAGCAGCAAAAAAGCATCTTGGGT...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
3UTR-3UTR CAA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTACCCAAGATGCTTTTTaGCTGCTAAAGCATTCATTA +
Preference number: 3 (lower is better)
Translates to: LPVLWYSPTISINKTECTTQDAF*LLKHSL
Trigger: TAATGAATGCTTTAGCAGCAAAAAAGCATCTTGGGT...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
3UTR CCA 72 bp GAATTAAAAACATTTATTTCTCATGGTTATGGGAACTaGAAAGTCCGAGATCAAGATGCTAGTAGGTTTGTT +
Preference number: 3 (lower is better)
Translates to: ELKTFISHGYGN*KVRDQDASRFV
Trigger: AACAAACCTACTAGCATCTTGATCTCGGACTTTCCAGTTCCCATAACCATGAGAAATAAATGTTTTTAATTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR TCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCACACGAAGGGCGCCGCTaGCCTCACCACCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMAHEGRR*PHHPEL
Trigger: GAGCTCAGGGTGGTGAGGTCAGCGGCGCCCTTCGTG...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTACGGGTCTCCGCAGCTaGACACTCGCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSATGLRS*TLAAPG
Trigger: GCCGGGAGCTGCGAGTGTCCAGCTGCGGAGACCCGT...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000166534.8
ENST00000401867.5
CDS-3UTR CCA 90 bp CAGGGCAGGCAGCATGTCTTGTTCGGTAGTCACCTTCCCCGCTCCGCAAGAGGTAGGACTCCCAGCCCTTaGGAGGGTGCAGAACGGGCT +
Preference number: 4 (lower is better)
Translates to: QGRQHVLFGSHLPRSARGRTPSP*EGAERA
Trigger: AGCCCGTTCTGCACCCTCCCAAGGGCTGGGAGTCCT...ACCTCTTGCGGAGCGGGGAAGGTGACTACCGAACAAGACATGCTGCCTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR TCA 90 bp CCACAAGCACAGGGCAGGCAGCATGTCTTGTTCGGTAGTCACCTTCCCCGCTCCGGTAGCTGGCGACAGTaGGGACTCCTGTCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: PQAQGRQHVLFGSHLPRSGSWRQ*GLLSWD
Trigger: ATCCCAAGACAGGAGTCCTCACTGTCGCCAGCTACC...GGAGCGGGGAAGGTGACTACCGAACAAGACATGCTGCCTGCCCTGTGCTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR TCA 90 bp TTCGGTAGTCACCTTCCCCGCTCCGCAAGAGGTTGTACCAGAACACAGCTGTACCACTTCCCGGGAGCCTaGCAGGGAAGAGCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: FGSHLPRSARGCTRTQLYHFPGA*QGRAAK
Trigger: CTTGGCCGCTCTTCCCTGTCAGGCTCCCGGGAAGTG...GTACAGCTGTGTTCTGGTACAACCTCTTGCGGAGCGGGGAAGGTGACTACCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR GCA 90 bp CCACAAGCACAGGGCAGGCAGCATGTCTTGTTCGGTAGTCACCTTCCCCGCTCCCAGCCCTTGGGAGGGTaGAGAACGGGCTTAGCCAAT +
Preference number: 4 (lower is better)
Translates to: PQAQGRQHVLFGSHLPRSQPLGG*RTGLAN
Trigger: ATTGGCTAAGCCCGTTCTGCACCCTCCCAAGGGCTG...GGAGCGGGGAAGGTGACTACCGAACAAGACATGCTGCCTGCCCTGTGCTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCACTCCGGGAAGTCCTCTaGCCGGAGGCAGTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMALREVL*PEAVSA
Trigger: AGCACTGACTGCCTCCGGCCAGAGGACTTCCCGGAG...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
3UTR CAA 72 bp ACTTGCAGCCCACAAGCACAGGGCAGGCAGCATGTCTaGTTCGGTAGTCACCTTCCCCGCTCCGCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: TCSPQAQGRQHV*FGSHLPRSARG
Trigger: ACCTCTTGCGGAGCGGGGAAGGTGACTACCGAACAAGACATGCTGCCTGCCCTGTGCTTGTGGGCTGCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR TCA 90 bp GTCCCACTCGTCCTCCTCTTTGAAGGGGGCAATGAGCAGCTGTGGGGCCCTGTTGGAAGACAGCATAGCTaGGGTAGTCCAGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: VPLVLLFEGGNEQLWGPVGRQHS*GSPAPV
Trigger: CACAGGTGCTGGACTACCTCAGCTATGCTGTCTTCC...AACAGGGCCCCACAGCTGCTCATTGCCCCCTTCAAAGAGGAGGACGAGTGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR GCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCACCTGCAGCTGAGTCCTaGAGGACAAGGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMAPAAES*RTRSSS
Trigger: GCTGGAGGACCTTGTCCTGCAGGACTCAGCTGCAGG...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCTGCAGCTGAGTCCTaGAGGACAAGGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSAPAAES*RTRSSS
Trigger: GCTGGAGGACCTTGTCCTGCAGGACTCAGCTGCAGG...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTGACAGCCGAGGGAACTaGACGAAGGGCGCCGCTGAC +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLDSRGN*TKGAAD
Trigger: GTCAGCGGCGCCCTTCGTGCAGTTCCCTCGGCTGTC...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CCA 90 bp CAGGGCAGGCAGCATGTCTTGTTCGGTAGTCACCTTCCCCGCTCCGCAAGAGGTACTGCTTGCGGTTTCTaGCACACAGAAGGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: QGRQHVLFGSHLPRSARGTACGF*HTEGSR
Trigger: ACGGGACCCTTCTGTGTGCCAGAAACCGCAAGCAGT...ACCTCTTGCGGAGCGGGGAAGGTGACTACCGAACAAGACATGCTGCCTGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CCA 90 bp TACCGCAGATTCCCTCCAGCTCGTTCGTGGCTTGGGTCAAGGGAGAGCAGGCGGGTCTCATCAGGGCTTTaGCAGCTCCTATCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: YRRFPPARSWLGSRESRRVSSGL*QLLSRP
Trigger: AGGACGAGATAGGAGCTGCCAAAGCCCTGATGAGAC...CCGCCTGCTCTCCCTTGACCCAAGCCACGAACGAGCTGGAGGGAATCTGCGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CCA 90 bp CTGTCCCACTCGTCCTCCTCTTTGAAGGGGGCAATGAGCAGCTGTGGGGCCCTGCTGGAAGTTCCCCTCTaGAAATTGTGCCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LSHSSSSLKGAMSSCGALLEVPL*KLCLGP
Trigger: TGGACCCAGGCACAATTTCCAGAGGGGAACTTCCAG...CAGGGCCCCACAGCTGCTCATTGCCCCCTTCAAAGAGGAGGACGAGTGGGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CCA 90 bp AAGCACAGGGCAGGCAGCATGTCTTGTTCGGTAGTCACCTTCCCCGCTCCGCAAGTGACTTGGTTGTGGTaGCCTCCTCCCCGGCATCAA +
Preference number: 4 (lower is better)
Translates to: KHRAGSMSCSVVTFPAPQVTWLW*PPPRHQ
Trigger: TTGATGCCGGGGAGGAGGCCACCACAACCAAGTCAC...TTGCGGAGCGGGGAAGGTGACTACCGAACAAGACATGCTGCCTGCCCTGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCTGTGACTTGGTTGTaGTGGCCTCCTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSAPVTWL*WPPPRH
Trigger: ATGCCGGGGAGGAGGCCACCACAACCAAGTCACAGG...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAACAGAGGGAAGTGTCTaGACACTCGCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMATEGSV*TLAAPG
Trigger: GCCGGGAGCTGCGAGTGTCCAGACACTTCCCTCTGT...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR TCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTGTAGTCCAGCACCTGTaGCTTGGTTGTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSAVVQHL*LGCGGL
Trigger: GAGGCCACCACAACCAAGTCACAGGTGCTGGACTAC...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTGGTAGCTGGCGACAGTaGGGACTCCTGTCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSAGSWRQ*GLLSWD
Trigger: ATCCCAAGACAGGAGTCCTCACTGTCGCCAGCTACC...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAGGTAGCTGGCGACAGTaGGGACTCCTGTCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMAGSWRQ*GLLSWD
Trigger: ATCCCAAGACAGGAGTCCTCACTGTCGCCAGCTACC...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCACACGTTGACATGGGCTaGAGGACCAGGAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMAHVDMG*RTRKGK
Trigger: CTTCCCCTTCCTGGTCCTTCAGCCCATGTCAACGTG...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAAGGGATGGCACAGGCTaGATGGAAGGGCTGGGACTT +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMARDGTG*MEGLGL
Trigger: AAGTCCCAGCCCTTCCATTCAGCCTGTGCCATCCCT...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTTTGCCAGCCTTCCTCTaGCCACTCCAGCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSALPAFL*PLQLMG
Trigger: ACCCATGAGCTGGAGTGGTCAGAGGAAGGCTGGCAA...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR GCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAAGGGAAGTGTCACACTaGTCTGGGCCAGGACCTTCC +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMAREVSH*SGPGPS
Trigger: GGAAGGTCCTGGCCCAGAGCAGTGTGACACTTCCCT...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAAGCTCCAGGGCACGGTaGAGATCACCCAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMASSRAR*RSPNWK
Trigger: CTTCCAGTTGGGTGATCTGCACCGTGCCCTGGAGCT...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTCAGCGCTCACCACACTaGTCTGGGCCAGGACCTTCC +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLQRSPH*SGPGPS
Trigger: GGAAGGTCCTGGCCCAGAGCAGTGTGGTGAGCGCTG...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR GCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTGATCCAGGCTCCTGCTaGGAAGGTCAACTGGGCATC +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSADPGSC*EGQLGI
Trigger: GATGCCCAGTTGACCTTCGCAGCAGGAGCCTGGATC...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR CCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAATCCGCCTGTCCCACTaGGTTAGCAACTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMAIRLSH*VSNCLR
Trigger: CCGCAAGCAGTTGCTAACCCAGTGGGACAGGCGGAT...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp TACCGCAGATTCCCTCCAGCTCGTTCGTGGCTTGGGTCAAGGGAGAGCAGGCGGTCTGGAAATTGTGCCTaGGTCCAGCCTGTATGTGTC +
Preference number: 4 (lower is better)
Translates to: YRRFPPARSWLGSRESRRSGNCA*VQPVCV
Trigger: GACACATACAGGCTGGACCCAGGCACAATTTCCAGA...CCGCCTGCTCTCCCTTGACCCAAGCCACGAACGAGCTGGAGGGAATCTGCGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAGTGACTTGGTTGTGGTaGCCTCCTCCCCGGCATCAA +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMAVTWLW*PPPRHQ
Trigger: TTGATGCCGGGGAGGAGGCCACCACAACCAAGTCAC...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTGTGACTTGGTTGTGGTaGCCTCCTCCCCGGCATCAA +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSAVTWLW*PPPRHQ
Trigger: TTGATGCCGGGGAGGAGGCCACCACAACCAAGTCAC...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAACCTGTGACTTGGTTGTaGTGGCCTCCTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQPVTWL*WPPPRH
Trigger: ATGCCGGGGAGGAGGCCACCACAACCAAGTCACAGG...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTAGCTCGTTCGTGGCTTaGGTCAAGGGAGAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSSSFVA*VKGEQA
Trigger: CGCCTGCTCTCCCTTGACCCAAGCCACGAACGAGCT...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCTCCAGCTCGTTCGTaGCTTGGGTCAAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSPPARS*LGSRES
Trigger: GCTCTCCCTTGACCCAAGCCACGAACGAGCTGGAGG...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAGGCAATGAGCAGCTGTaGGGCCCTGTTGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQGNEQL*GPVAMV
Trigger: CACCATGGCAACAGGGCCCCACAGCTGCTCATTGCC...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp TTCGGTAGTCACCTTCCCCGCTCCGCAAGAGGTTGTACCAGAACACAGCTGTACGGCAATGAGCAGCTGTaGGGCCCTGTTGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: FGSHLPRSARGCTRTQLYGNEQL*GPVAMV
Trigger: CACCATGGCAACAGGGCCCCACAGCTGCTCATTGCC...GTACAGCTGTGTTCTGGTACAACCTCTTGCGGAGCGGGGAAGGTGACTACCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR TCA 90 bp CAGGGCAGGCAGCATGTCTTGTTCGGTAGTCACCTTCCCCGCTCCGCAAGAGGTAGCCTGTATGTGTCCTaGAGTCTCATCAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: QGRQHVLFGSHLPRSARGSLYVS*SLIRAL
Trigger: CAAAGCCCTGATGAGACTTCAGGACACATACAGGCT...ACCTCTTGCGGAGCGGGGAAGGTGACTACCGAACAAGACATGCTGCCTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR TCA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTGTAGTCCAGCACCTGTaGCTTGGTTGTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSVVQHL*LGCGGL
Trigger: GAGGCCACCACAACCAAGTCACAGGTGCTGGACTAC...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAGTAGTCCAGCACCTGTaGCTTGGTTGTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQVVQHL*LGCGGL
Trigger: GAGGCCACCACAACCAAGTCACAGGTGCTGGACTAC...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAATACGGGGTGTCAGTTTaGCACCCTCCCCACGACAGA +
Preference number: 4 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQYGVSV*HPPHDR
Trigger: TCTGTCGTGGGGAGGGTGTCAAACTGACACCCCGTA...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCACTGTCCAGCAATACCTaGGGCAGGAAGTGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMALSSNT*GRKCPD
Trigger: ATCAGGGCACTTCCTGCCTCAGGTATTGCTGGACAG...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR GCA 90 bp CCACAAGCACAGGGCAGGCAGCATGTCTTGTTCGGTAGTCACCTTCCCCGCTCCGGGTTAGCAACTGCTTaGGGTTTCTGGCACACAGAA +
Preference number: 4 (lower is better)
Translates to: PQAQGRQHVLFGSHLPRSGLATA*GFWHTE
Trigger: TTCTGTGTGCCAGAAACCGCAAGCAGTTGCTAACCC...GGAGCGGGGAAGGTGACTACCGAACAAGACATGCTGCCTGCCCTGTGCTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR GCA 90 bp CCAATAACTGCTCAAAGTACCGCAGATTCCCTCCAGCTCGTTCGTGGCTTGGGTCCTGCAGCTGAGTCCTaGAGGACAAGGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PITAQSTADSLQLVRGLGPAAES*RTRSSS
Trigger: GCTGGAGGACCTTGTCCTGCAGGACTCAGCTGCAGG...ACCCAAGCCACGAACGAGCTGGAGGGAATCTGCGGTACTTTGAGCAGTTATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR GCA 90 bp TCTTTGAAGGGGGCAATGAGCAGCTGTGGGGCCCTGTTGCCATGGTGGTACCTAGGGAAGAACTGCCGCTaGACAGAGAGGTTGGCGATA +
Preference number: 4 (lower is better)
Translates to: SLKGAMSSCGALLPWWYLGKNCR*TERLAI
Trigger: TATCGCCAACCTCTCTGTGCAGCGGCAGTTCTTCCC...TAGGTACCACCATGGCAACAGGGCCCCACAGCTGCTCATTGCCCCCTTCAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR GCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTTCAGTGGGGAAGAACTaGCGCTGCACAGAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSASVGKN*RCTERL
Trigger: CAACCTCTCTGTGCAGCGGCAGTTCTTCCCCACTGA...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp TCTTTGAAGGGGGCAATGAGCAGCTGTGGGGCCCTGTTGCCATGGTGGTACCTATCAGTGGGGAAGAACTaGCGCTGCACAGAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SLKGAMSSCGALLPWWYLSVGKN*RCTERL
Trigger: CAACCTCTCTGTGCAGCGGCAGTTCTTCCCCACTGA...TAGGTACCACCATGGCAACAGGGCCCCACAGCTGCTCATTGCCCCCTTCAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR GCA 90 bp GTCCCACTCGTCCTCCTCTTTGAAGGGGGCAATGAGCAGCTGTGGGGCCCTGTTAGCTGCTTTAGCACCTaGTCCATCCACAACACCGTA +
Preference number: 4 (lower is better)
Translates to: VPLVLLFEGGNEQLWGPVSCFST*SIHNTV
Trigger: TACGGTGTTGTGGATGGAGCAGGTGCTAAAGCAGCT...AACAGGGCCCCACAGCTGCTCATTGCCCCCTTCAAAGAGGAGGACGAGTGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR GCA 90 bp TCTTTGAAGGGGGCAATGAGCAGCTGTGGGGCCCTGTTGCCATGGTGGTACCTATCCCCGGCATCAAGCTaGTTTAGCACCTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: SLKGAMSSCGALLPWWYLSPASS*FSTCSI
Trigger: GATGGAGCAGGTGCTAAAGCAGCTTGATGCCGGGGA...TAGGTACCACCATGGCAACAGGGCCCCACAGCTGCTCATTGCCCCCTTCAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR GCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCACTACCAAGTACCCACTaGCCGCATTCCCTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMALPSTH*PHSLPA
Trigger: TGCTGGAAGGGAATGCGGGCAGTGGGTACTTGGTAG...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR CCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCATCTCGTCCTCATCAGTaGGGAAGAACTGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMASRPHQ*GRTAAA
Trigger: TGCAGCGGCAGTTCTTCCCCACTGATGAGGACGAGA...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CCAATAACTGCTCAAAGTACCGCAGATTCCCTCCAGCTCGTTCGTGGCTTGGGTCCTGTGACTTGGTTGTaGTGGCCTCCTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: PITAQSTADSLQLVRGLGPVTWL*WPPPRH
Trigger: ATGCCGGGGAGGAGGCCACCACAACCAAGTCACAGG...ACCCAAGCCACGAACGAGCTGGAGGGAATCTGCGGTACTTTGAGCAGTTATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTCCAGCACCTGTGACTTaGTTGTGGTGGCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLPAPVT*LWWPPP
Trigger: GGGAGGAGGCCACCACAACCAAGTCACAGGTGCTGG...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTAGCTCGTTCGTGGCTTaGGTCAAGGGAGAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLSSFVA*VKGEQA
Trigger: CGCCTGCTCTCCCTTGACCCAAGCCACGAACGAGCT...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
3UTR CAA 72 bp AGCGGCCCATCCCAAAGCAGTCATCCACACTCAGCATaGCCTGGTACTTGGTTCCTGGAAGTTCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SGPSQSSHPHSA*PGTWFLEVPLW
Trigger: CCAGAGGGGAACTTCCAGGAACCAAGTACCAGGCAATGCTGAGTGTGGATGACTGCTTTGGGATGGGCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR TCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCACTCAGCATCAGCAGCTaGCTTGCTAGTCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMALSISS*LASQGF
Trigger: GAAGCCTTGACTAGCAAGTCAGCTGCTGATGCTGAG...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAGATAAAACCTGCAGCTaGGTCCTGCAGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMADKTCS*VLQDKV
Trigger: GACCTTGTCCTGCAGGACTCAGCTGCAGGTTTTATC...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTAGGGAAGTGTCACACTaGTCTGGGCCAGGACCTTCC +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLREVSH*SGPGPS
Trigger: GGAAGGTCCTGGCCCAGAGCAGTGTGACACTTCCCT...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTGTGAAGAATTCGGCCTaGACACAGCTCAGGACACCA +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSAVKNSA*TQLRTP
Trigger: TGGTGTCCTGAGCTGTGTGCAGGCCGAATTCTTCAC...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTGGGAAGAACTGCCGCTaGACAGAGAGGTTGGCGATA +
Preference number: 4 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSGKNCR*TERLAI
Trigger: TATCGCCAACCTCTCTGTGCAGCGGCAGTTCTTCCC...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTTCCCCGGCATCAAGCTaGTTTAGCACCTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSSPASS*FSTCSI
Trigger: GATGGAGCAGGTGCTAAAGCAGCTTGATGCCGGGGA...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAATCCCCGGCATCAAGCTaGTTTAGCACCTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQSPASS*FSTCSI
Trigger: GATGGAGCAGGTGCTAAAGCAGCTTGATGCCGGGGA...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCACAGGCCTCTCATAGATaGCTTCTGGGGTTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMAQASHR*LLGLLA
Trigger: AGCTAGCAACCCCAGAAGGCATCTATGAGAGGCCTG...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTACGGGTCTCCGCAGCTaGCAAGGAAAAACAACGCTG +
Preference number: 4 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSTGLRS*QGKTTL
Trigger: CAGCGTTGTTTTTCCTTGGCAGCTGCGGAGACCCGT...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379086.5
ENST00000379100.7
ENST00000428369.6
CDS-3UTR GCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAATCCACGATGCCCTTTTaGCAGCCTTCCTCTGACCAC +
Preference number: 4 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQSTMPF*QPSSDH
Trigger: GTGGTCAGAGGAAGGCTGGCAAAAGGGCATCGTGGA...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR GCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAATTGGCCAAGGTCTCTaGTCCCACTCACATAGGCTG +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMAIGQGL*SHSHRL
Trigger: CAGCCTATGTGAGTGGGAGCAGAGACCTTGGCCAAT...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR CCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTATCCGCCTGTCCCACTaGGTTAGCAACTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLIRLSH*VSNCLR
Trigger: CCGCAAGCAGTTGCTAACCCAGTGGGACAGGCGGAT...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCAAGTGTCACACTGCTCTaGGCCAGGACCTTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSSVTLL*ARTFPL
Trigger: GAGCGGGAAGGTCCTGGCCCAGAGCAGTGTGACACT...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CAGGGCAGGCAGCATGTCTTGTTCGGTAGTCACCTTCCCCGCTCCGCAAGAGGTACACCCAGAGTTTCATaGTCACAGAGGGAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: QGRQHVLFGSHLPRSARGTPRVS*SQREVS
Trigger: TGACACTTCCCTCTGTGACCATGAAACTCTGGGTGT...ACCTCTTGCGGAGCGGGGAAGGTGACTACCGAACAAGACATGCTGCCTGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCACTGGAAGTTCCCCTCTaGAAATTGTGCCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMALEVPL*KLCLGP
Trigger: TGGACCCAGGCACAATTTCCAGAGGGGAACTTCCAG...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCTGGAAGTTCCCCTCTaGAAATTGTGCCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSALEVPL*KLCLGP
Trigger: TGGACCCAGGCACAATTTCCAGAGGGGAACTTCCAG...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCACCTGTGACTTGGTTGTaGTGGCCTCCTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSPVTWL*WPPPRH
Trigger: ATGCCGGGGAGGAGGCCACCACAACCAAGTCACAGG...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCACCAGCACCTGTGACTTaGTTGTGGTGGCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSPAPVT*LWWPPP
Trigger: GGGAGGAGGCCACCACAACCAAGTCACAGGTGCTGG...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCACCTCCAGCTCGTTCGTaGCTTGGGTCAAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSPPARS*LGSRES
Trigger: GCTCTCCCTTGACCCAAGCCACGAACGAGCTGGAGG...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAGATCAGGGAAGACGGTaGCACCACCAGCTTCTACAT +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMADQGRR*HHQLLH
Trigger: ATGTAGAAGCTGGTGGTGCCACCGTCTTCCCTGATC...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTGATCAGGGAAGACGGTaGCACCACCAGCTTCTACAT +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSADQGRR*HHQLLH
Trigger: ATGTAGAAGCTGGTGGTGCCACCGTCTTCCCTGATC...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCATCTGTCACGTTGACATaGGCTGAAGGACCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMASVTLT*AEGPGR
Trigger: CCTTCCTGGTCCTTCAGCCCATGTCAACGTGACAGA...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTGGAGTCGCCCTAGTATaGTCTCCCTCTGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLGVALV*SPSAPD
Trigger: GTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCC...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTGCTGAATGGAAGGGCTaGGACTTCAGTCACACAGGA +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSAAEWKG*DFSHTG
Trigger: TCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTTTCCACAAGGATGTCTaGACACTCGCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLFHKDV*TLAAPG
Trigger: GCCGGGAGCTGCGAGTGTCCAGACATCCTTGTGGAA...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379086.5
ENST00000379100.7
CDS-3UTR CCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCATGTAGACAGCGTCCGTaGACAGCTATCCCCTACAGT +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMACRQRP*TAIPYS
Trigger: ACTGTAGGGGATAGCTGTCCACGGACGCTGTCTACA...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR CCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAACAGAGGGAAGTGTCTaGGCTGTCCAGCAATACCTG +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMATEGSV*AVQQYL
Trigger: CAGGTATTGCTGGACAGCCCAGACACTTCCCTCTGT...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR TCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAGATAAAACCTGCAGCTaGGTCCTGCAGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQDKTCS*VLQDKV
Trigger: GACCTTGTCCTGCAGGACTCAGCTGCAGGTTTTATC...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCAGTAGTCCAGCACCTGTaGCTTGGTTGTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSVVQHL*LGCGGL
Trigger: GAGGCCACCACAACCAAGTCACAGGTGCTGGACTAC...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCAGGTAGCTGGCGACAGTaGGGACTCCTGTCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSGSWRQ*GLLSWD
Trigger: ATCCCAAGACAGGAGTCCTCACTGTCGCCAGCTACC...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp AACCCTGTGATATGCTGCATCCGACGATTTACTCGGGCCACAACAGGGTCATCACACGTTGACATGGGCTaGAGGACCAGGAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: NPVICCIRRFTRATTGSSHVDMG*RTRKGK
Trigger: CTTCCCCTTCCTGGTCCTTCAGCCCATGTCAACGTG...TGATGACCCTGTTGTGGCCCGAGTAAATCGTCGGATGCAGCATATCACAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR TCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTAGGTGTCTGTCACGTTaGCATGGGCTGAAGGACCAG +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLRCLSR*HGLKDQ
Trigger: CTGGTCCTTCAGCCCATGTCAACGTGACAGACACCT...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp CCAATAACTGCTCAAAGTACCGCAGATTCCCTCCAGCTCGTTCGTGGCTTGGGTAGGTGTCTGTCACGTTaGCATGGGCTGAAGGACCAG +
Preference number: 4 (lower is better)
Translates to: PITAQSTADSLQLVRGLGRCLSR*HGLKDQ
Trigger: CTGGTCCTTCAGCCCATGTCAACGTGACAGACACCT...ACCCAAGCCACGAACGAGCTGGAGGGAATCTGCGGTACTTTGAGCAGTTATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR TCA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTAAGTGCTGGGGGCAGTaGAGGAGATGTGATCTAGGA +
Preference number: 4 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSKCWGQ*RRCDLG
Trigger: TCCTAGATCACATCTCCTTCACTGCCCCCAGCACTT...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAGGGTTAGCAACTGCTTaGGGTTTCTGGCACACAGAA +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMAGLATA*GFWHTE
Trigger: TTCTGTGTGCCAGAAACCGCAAGCAGTTGCTAACCC...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAACACTGGGTTAGCAACTaGTTGCGGTTTCTGGCACAC +
Preference number: 4 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQHWVSN*LRFLAH
Trigger: GTGTGCCAGAAACCGCAAGCAGTTGCTAACCCAGTG...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTGGGAAGAACTGCCGCTaGACAGAGAGGTTGGCGATA +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLGKNCR*TERLAI
Trigger: TATCGCCAACCTCTCTGTGCAGCGGCAGTTCTTCCC...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAATCCACACTCAGCATTaGCTGGTACTTGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMAIHTQH*LVLGSW
Trigger: CCAGGAACCAAGTACCAGGCAATGCTGAGTGTGGAT...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTAGCTGCTTTAGCACCTaGTCCATCCACAACACCGTA +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSASCFST*SIHNTV
Trigger: TACGGTGTTGTGGATGGAGCAGGTGCTAAAGCAGCT...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp CCGGTAGCTGGCGACAGTGAGGACTCCTGTCTTGGGATCACGAACGGTGGCTCGTCTTCCTCCAATAACTaGTCAAAGTACCGCAGATTC +
Preference number: 4 (lower is better)
Translates to: PVAGDSEDSCLGITNGGSSSSNN*SKYRRF
Trigger: GAATCTGCGGTACTTTGAGCAGTTATTGGAGGAAGA...CGAGCCACCGTTCGTGATCCCAAGACAGGAGTCCTCACTGTCGCCAGCTACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR GCA 90 bp CCGGTAGCTGGCGACAGTGAGGACTCCTGTCTTGGGATCACGAACGGTGGCTCGGTTAACCCTGTGATATaGTGCATCCGACGATTTACT +
Preference number: 4 (lower is better)
Translates to: PVAGDSEDSCLGITNGGSVNPVI*CIRRFT
Trigger: AGTAAATCGTCGGATGCAGCATATCACAGGGTTAAC...CGAGCCACCGTTCGTGATCCCAAGACAGGAGTCCTCACTGTCGCCAGCTACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR GCA 90 bp CCGGTAGCTGGCGACAGTGAGGACTCCTGTCTTGGGATCACGAACGGTGGCTCGAGTATGGTCTCCCTCTaGTCCAGACAAACATTCATT +
Preference number: 4 (lower is better)
Translates to: PVAGDSEDSCLGITNGGSSMVSL*SRQTFI
Trigger: AATGAATGTTTGTCTGGAGCAGAGGGAGACCATACT...CGAGCCACCGTTCGTGATCCCAAGACAGGAGTCCTCACTGTCGCCAGCTACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR GCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTACGGGTCTCCGCAGCTaGCAAGGAAAAACAACGCTG +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLTGLRS*QGKTTL
Trigger: CAGCGTTGTTTTTCCTTGGCAGCTGCGGAGACCCGT...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379086.5
ENST00000379100.7
ENST00000428369.6
CDS-3UTR CCA 90 bp GAGGCTCTCGTAAACATCCCTCTCAGGCAGGTAGTCCACAGGCCTCTCATAGATTCTCGTCCTCATCAGTaGGGAAGAACTGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: EALVNIPLRQVVHRPLIDSRPHQ*GRTAAA
Trigger: TGCAGCGGCAGTTCTTCCCCACTGATGAGGACGAGA...ATCTATGAGAGGCCTGTGGACTACCTGCCTGAGAGGGATGTTTACGAGAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCATCTGGAAATTGTGCCTaGGTCCAGCCTGTATGTGTC +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMASGNCA*VQPVCV
Trigger: GACACATACAGGCTGGACCCAGGCACAATTTCCAGA...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTGCATTGCCTGGTACTTaGTTCCTGGAAGTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSALPGT*FLEVPL
Trigger: GAGGGGAACTTCCAGGAACCAAGTACCAGGCAATGC...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAGCATTGCCTGGTACTTaGTTCCTGGAAGTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQALPGT*FLEVPL
Trigger: GAGGGGAACTTCCAGGAACCAAGTACCAGGCAATGC...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCAGTGACTTGGTTGTGGTaGCCTCCTCCCCGGCATCAA +
Preference number: 4 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSVTWLW*PPPRHQ
Trigger: TTGATGCCGGGGAGGAGGCCACCACAACCAAGTCAC...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCCTGTGACTTGGTTGTaGTGGCCTCCTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLPVTWL*WPPPRH
Trigger: ATGCCGGGGAGGAGGCCACCACAACCAAGTCACAGG...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCCAGCACCTGTGACTTaGTTGTGGTGGCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLPAPVT*LWWPPP
Trigger: GGGAGGAGGCCACCACAACCAAGTCACAGGTGCTGG...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTCTAGCCAGGAGCTTTTaGAAACCCGGTAGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLLARSF*KPGSWR
Trigger: TCGCCAGCTACCGGGTTTCCAAAAGCTCCTGGCTAG...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCATGGAACCACTTATTaGAGACCCACTTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSAHGTTY*RPTCSP
Trigger: TGGGCTGCAAGTGGGTCTCCAATAAGTGGTTCCATG...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTGCTGAATGGAAGGGCTaGGACTTCAGTCACACAGGA +
Preference number: 4 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSAEWKG*DFSHTG
Trigger: TCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCACAAGGCCATAAGGAATaGCATTGGCCAAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMAQGHKE*HWPRSL
Trigger: CAGAGACCTTGGCCAATGCCATTCCTTATGGCCTTG...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR CCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACAGAGGGAAGTGTCTaGGCTGTCCAGCAATACCTG +
Preference number: 4 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQTEGSV*AVQQYL
Trigger: CAGGTATTGCTGGACAGCCCAGACACTTCCCTCTGT...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
3UTR CAA 72 bp GACCTCCCAAGGGCTCCGCATCCTAATATCATCACATaGGGGGTTAAGATTTCAACATATGGGCCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: DLPRAPHPNIIT*GVKISTYGPGA
Trigger: CGCGCCCGGCCCATATGTTGAAATCTTAACCCCCAATGTGATGATATTAGGATGCGGAGCCCTTGGGAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR TCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTGATAAAACCTGCAGCTaGGTCCTGCAGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLDKTCS*VLQDKV
Trigger: GACCTTGTCCTGCAGGACTCAGCTGCAGGTTTTATC...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTAGCCTGTATGTGTCCTaGAGTCTCATCAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSSLYVS*SLIRAL
Trigger: CAAAGCCCTGATGAGACTTCAGGACACATACAGGCT...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGGTAGTCCAGCACCTGTaGCTTGGTTGTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLVVQHL*LGCGGL
Trigger: GAGGCCACCACAACCAAGTCACAGGTGCTGGACTAC...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGTACGGGGTGTCAGTTTaGCACCCTCCCCACGACAGA +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLYGVSV*HPPHDR
Trigger: TCTGTCGTGGGGAGGGTGTCAAACTGACACCCCGTA...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGGGTAGCTGGCGACAGTaGGGACTCCTGTCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLGSWRQ*GLLSWD
Trigger: ATCCCAAGACAGGAGTCCTCACTGTCGCCAGCTACC...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGAGGGATGGCACAGGCTaGATGGAAGGGCTGGGACTT +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLRDGTG*MEGLGL
Trigger: AAGTCCCAGCCCTTCCATTCAGCCTGTGCCATCCCT...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp TATGCTGCATCCGACGATTTACTCGGGCCACAACAGGGTCATCATCTTCCTCTAAGGGATGGCACAGGCTaGATGGAAGGGCTGGGACTT +
Preference number: 4 (lower is better)
Translates to: YAASDDLLGPQQGHHLPLRDGTG*MEGLGL
Trigger: AAGTCCCAGCCCTTCCATTCAGCCTGTGCCATCCCT...TAGAGGAAGATGATGACCCTGTTGTGGCCCGAGTAAATCGTCGGATGCAGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR GCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTCACTGGGTTAGCAACTaGTTGCGGTTTCTGGCACAC +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLHWVSN*LRFLAH
Trigger: GTGTGCCAGAAACCGCAAGCAGTTGCTAACCCAGTG...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAACCAGGCCATCAGCAATaGAGACACCCAGAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQPGHQQ*RHPEFH
Trigger: ATGAAACTCTGGGTGTCTGCATTGCTGATGGCCTGG...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTGTGAAGAATTCGGCCTaGACACAGCTCAGGACACCA +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLVKNSA*TQLRTP
Trigger: TGGTGTCCTGAGCTGTGTGCAGGCCGAATTCTTCAC...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp CCAATAACTGCTCAAAGTACCGCAGATTCCCTCCAGCTCGTTCGTGGCTTGGGTGTGAAGAATTCGGCCTaGACACAGCTCAGGACACCA +
Preference number: 4 (lower is better)
Translates to: PITAQSTADSLQLVRGLGVKNSA*TQLRTP
Trigger: TGGTGTCCTGAGCTGTGTGCAGGCCGAATTCTTCAC...ACCCAAGCCACGAACGAGCTGGAGGGAATCTGCGGTACTTTGAGCAGTTATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR GCA 90 bp CCACAAGCACAGGGCAGGCAGCATGTCTTGTTCGGTAGTCACCTTCCCCGCTCCCACCAGCTCTTTCTCTaGATAAATCAGGTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: PQAQGRQHVLFGSHLPRSHQLFL*INQVSH
Trigger: ATGACTGACCTGATTTATGCAGAGAAAGAGCTGGTG...GGAGCGGGGAAGGTGACTACCGAACAAGACATGCTGCCTGCCCTGTGCTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR GCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCAGGGAAGAACTGCCGCTaGACAGAGAGGTTGGCGATA +
Preference number: 4 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSGKNCR*TERLAI
Trigger: TATCGCCAACCTCTCTGTGCAGCGGCAGTTCTTCCC...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCATCAGTGGGGAAGAACTaGCGCTGCACAGAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSSVGKN*RCTERL
Trigger: CAACCTCTCTGTGCAGCGGCAGTTCTTCCCCACTGA...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AACCCTGTGATATGCTGCATCCGACGATTTACTCGGGCCACAACAGGGTCATCACCCCTCTGGAAATTGTaGCTGGGTCCAGCCTGTATG +
Preference number: 4 (lower is better)
Translates to: NPVICCIRRFTRATTGSSPLWKL*LGPACM
Trigger: CATACAGGCTGGACCCAGGCACAATTTCCAGAGGGG...TGATGACCCTGTTGTGGCCCGAGTAAATCGTCGGATGCAGCATATCACAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR GCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGAGCTCCAGGGCACGGTaGAGATCACCCAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLSSRAR*RSPNWK
Trigger: CTTCCAGTTGGGTGATCTGCACCGTGCCCTGGAGCT...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTCAGGCCTCTCATAGATaGCTTCTGGGGTTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLQASHR*LLGLLA
Trigger: AGCTAGCAACCCCAGAAGGCATCTATGAGAGGCCTG...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTAACCCTGTGATATGCTaGATCCGACGATTTACTCGG +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSANPVIC*IRRFTR
Trigger: CCGAGTAAATCGTCGGATGCAGCATATCACAGGGTT...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTTATCCAGACTCTGCCTaGATGAAGGTGATGCATAGG +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSAYPDSA*MKVMHR
Trigger: CCTATGCATCACCTTCATGCAGGCAGAGTCTGGATA...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAACCTTCCCCATCACCTTaGTTCCACTACAAGGCCATA +
Preference number: 4 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQPSPSP*FHYKAI
Trigger: TATGGCCTTGTAGTGGAAGCAAGGTGATGGGGAAGG...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR GCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGACCTGATCCAGGCTCCTaGTGCGAAGGTCAACTGGGC +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGPDPGS*CEGQLG
Trigger: GCCCAGTTGACCTTCGCAGCAGGAGCCTGGATCAGG...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR CCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCACTGGTACTTGGTTCCTaGAAGTTCCCCTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMALVLGS*KFPSGN
Trigger: ATTTCCAGAGGGGAACTTCCAGGAACCAAGTACCAG...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTGCATTGCCTGGTACTTaGTTCCTGGAAGTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLALPGT*FLEVPL
Trigger: GAGGGGAACTTCCAGGAACCAAGTACCAGGCAATGC...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGACCAGCACCTGTGACTTaGTTGTGGTGGCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGPAPVT*LWWPPP
Trigger: GGGAGGAGGCCACCACAACCAAGTCACAGGTGCTGG...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCACTAGCCAGGAGCTTTTaGAAACCCGGTAGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSLARSF*KPGSWR
Trigger: TCGCCAGCTACCGGGTTTCCAAAAGCTCCTGGCTAG...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTTCCTGTCCTCGTTCATaGAACCACTTATTGGAGACC +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSASCPRS*NHLLET
Trigger: GGTCTCCAATAAGTGGTTCCATGAACGAGGACAGGA...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTGCTGCGAAGGTCAACTaGGCATCTTACACATGCAGG +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLAAKVN*ASYTCR
Trigger: CCTGCATGTGTAAGATGCCCAGTTGACCTTCGCAGC...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR TCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTAGCCTGTATGTGTCCTaGAGTCTCATCAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLSLYVS*SLIRAL
Trigger: CAAAGCCCTGATGAGACTTCAGGACACATACAGGCT...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGGGAAGACAGCATAGCTaGGGTAGTCCAGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLGRQHS*GSPAPV
Trigger: CACAGGTGCTGGACTACCTCAGCTATGCTGTCTTCC...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAGGTAGCTGGCGACAGTaGGGACTCCTGTCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGGSWRQ*GLLSWD
Trigger: ATCCCAAGACAGGAGTCCTCACTGTCGCCAGCTACC...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCATTACTGTTAACCCTGTaGTATGCTGCATCCGACGAT +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMALLLTL*YAASDD
Trigger: ATCGTCGGATGCAGCATATCACAGGGTTAACAGTAA...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTTTACTGTTAACCCTGTaGTATGCTGCATCCGACGAT +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSALLLTL*YAASDD
Trigger: ATCGTCGGATGCAGCATATCACAGGGTTAACAGTAA...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCATCCAGAAAAGGACACTaGCACTTAGAGGGAACACAA +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMASRKGH*HLEGTQ
Trigger: TTGTGTTCCCTCTAAGTGTCAGTGTCCTTTTCTGGA...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAAGGGAAGTGTCACACTaGTCTGGGCCAGGACCTTCC +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGREVSH*SGPGPS
Trigger: GGAAGGTCCTGGCCCAGAGCAGTGTGACACTTCCCT...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTCCAGGCCATCAGCAATaGAGACACCCAGAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLPGHQQ*RHPEFH
Trigger: ATGAAACTCTGGGTGTCTGCATTGCTGATGGCCTGG...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTATCCACACTCAGCATTaGCTGGTACTTGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLIHTQH*LVLGSW
Trigger: CCAGGAACCAAGTACCAGGCAATGCTGAGTGTGGAT...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTAGCTGCTTTAGCACCTaGTCCATCCACAACACCGTA +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLSCFST*SIHNTV
Trigger: TACGGTGTTGTGGATGGAGCAGGTGCTAAAGCAGCT...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGTCCCCGGCATCAAGCTaGTTTAGCACCTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLSPASS*FSTCSI
Trigger: GATGGAGCAGGTGCTAAAGCAGCTTGATGCCGGGGA...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAAGCTCCAGGGCACGGTaGAGATCACCCAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGSSRAR*RSPNWK
Trigger: CTTCCAGTTGGGTGATCTGCACCGTGCCCTGGAGCT...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp TTCGGTAGTCACCTTCCCCGCTCCGCAAGAGGTTGTACCAGAACACAGCTGTACAACCCTGTGATATGCTaGATCCGACGATTTACTCGG +
Preference number: 4 (lower is better)
Translates to: FGSHLPRSARGCTRTQLYNPVIC*IRRFTR
Trigger: CCGAGTAAATCGTCGGATGCAGCATATCACAGGGTT...GTACAGCTGTGTTCTGGTACAACCTCTTGCGGAGCGGGGAAGGTGACTACCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR GCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCATCATTATCCAGACTCTaGCTGCATGAAGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMASLSRL*LHEGDA
Trigger: TGCATCACCTTCATGCAGGCAGAGTCTGGATAATGA...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAATCCGCCTGTCCCACTaGGTTAGCAACTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGIRLSH*VSNCLR
Trigger: CCGCAAGCAGTTGCTAACCCAGTGGGACAGGCGGAT...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCACTGGAAGTTCCCCTCTaGAAATTGTGCCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSLEVPL*KLCLGP
Trigger: TGGACCCAGGCACAATTTCCAGAGGGGAACTTCCAG...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTACACTCAGCATTGCCTaGTACTTGGTTCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSTLSIA*YLVPGS
Trigger: ACTTCCAGGAACCAAGTACCAGGCAATGCTGAGTGT...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTTCCTGTCCTCGTTCATaGAACCACTTATTGGAGACC +
Preference number: 4 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSSCPRS*NHLLET
Trigger: GGTCTCCAATAAGTGGTTCCATGAACGAGGACAGGA...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAGGAGTCGCCCTAGTATaGTCTCCCTCTGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGGVALV*SPSAPD
Trigger: GTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCC...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACACCCAGAGTTTCATaGTCACAGAGGGAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQTPRVS*SQREVS
Trigger: AGACACTTCCCTCTGTGACCATGAAACTCTGGGTGT...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360568.8
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTCAAGGCCATAAGGAATaGCATTGGCCAAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLQGHKE*HWPRSL
Trigger: CAGAGACCTTGGCCAATGCCATTCCTTATGGCCTTG...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR TCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAGTTTTGCGATCTCCTTaGTCCTCTCGATTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQVLRSP*SSRFPH
Trigger: ATGAGGAAATCGAGAGGATCAAGGAGATCGCAAAAC...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTGTTTTGCGATCTCCTTaGTCCTCTCGATTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSVLRSP*SSRFPH
Trigger: ATGAGGAAATCGAGAGGATCAAGGAGATCGCAAAAC...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTTTACTGTTAACCCTGTaGTATGCTGCATCCGACGAT +
Preference number: 4 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSLLLTL*YAASDD
Trigger: ATCGTCGGATGCAGCATATCACAGGGTTAACAGTAA...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCATCAGTCAACTTCTGTTaGTCCACAAGGTCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMASVNFC*STRSQE
Trigger: TTCTTGAGACCTTGTGGATCAACAGAAGTTGACTGA...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAATCAGGTCAGTCATGTaGCCAATAGAGGTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMAIRSVM*PIEVKN
Trigger: ATTCTTCACCTCTATTGGGCACATGACTGACCTGAT...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCACCAGCTCTTTCTCTaGATAAATCAGGTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSAHQLFL*INQVSH
Trigger: ATGACTGACCTGATTTATGCAGAGAAAGAGCTGGTG...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAATACTCTTTCAGAGACTaGACCAGCTCTTTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQYSFRD*TSSFSA
Trigger: TGCAGAGAAAGAGCTGGTGCAGTCTCTGAAAGAGTA...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGATCAGTGGGGAAGAACTaGCGCTGCACAGAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGSVGKN*RCTERL
Trigger: CAACCTCTCTGTGCAGCGGCAGTTCTTCCCCACTGA...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGACCCCTCTGGAAATTGTaGCTGGGTCCAGCCTGTATG +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGPLWKL*LGPACM
Trigger: CATACAGGCTGGACCCAGGCACAATTTCCAGAGGGG...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGATCCCCGGCATCAAGCTaGTTTAGCACCTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGSPASS*FSTCSI
Trigger: GATGGAGCAGGTGCTAAAGCAGCTTGATGCCGGGGA...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAGTTAACCCTGTGATATaGTGCATCCGACGATTTACT +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMAVNPVI*CIRRFT
Trigger: AGTAAATCGTCGGATGCAGCATATCACAGGGTTAAC...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAAGTATGGTCTCCCTCTaGTCCAGACAAACATTCATT +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMASMVSL*SRQTFI
Trigger: AATGAATGTTTGTCTGGAGCAGAGGGAGACCATACT...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTAGTATGGTCTCCCTCTaGTCCAGACAAACATTCATT +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSASMVSL*SRQTFI
Trigger: AATGAATGTTTGTCTGGAGCAGAGGGAGACCATACT...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCATTATCAGCAGCATGCTaGCTGTATTATGGTACAGTC +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMALSAAC*LYYGTV
Trigger: GACTGTACCATAATACAGGCAGCATGCTGCTGATAA...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp AGAGGGAACACAAGTGTTGAAACCAGGTCTGAAATCCAAGACCCAAGATGCTTTCCTGATCCAGGCTCCTaGTGCGAAGGTCAACTGGGC +
Preference number: 4 (lower is better)
Translates to: RGNTSVETRSEIQDPRCFPDPGS*CEGQLG
Trigger: GCCCAGTTGACCTTCGCAGCAGGAGCCTGGATCAGG...AAAGCATCTTGGGTCTTGGATTTCAGACCTGGTTTCAACACTTGTGTTCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401867.5
CDS-3UTR CCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAACTGCTTGCGGTTTCTaGCACACAGAAGGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGTACGF*HTEGSR
Trigger: ACGGGACCCTTCTGTGTGCCAGAAACCGCAAGCAGT...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGGTCTCATCAGGGCTTTaGCAGCTCCTATCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLVSSGL*QLLSRP
Trigger: AGGACGAGATAGGAGCTGCCAAAGCCCTGATGAGAC...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CCAATAACTGCTCAAAGTACCGCAGATTCCCTCCAGCTCGTTCGTGGCTTGGGTCTGGTACTTGGTTCCTaGAAGTTCCCCTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: PITAQSTADSLQLVRGLGLVLGS*KFPSGN
Trigger: ATTTCCAGAGGGGAACTTCCAGGAACCAAGTACCAG...ACCCAAGCCACGAACGAGCTGGAGGGAATCTGCGGTACTTTGAGCAGTTATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CCA 90 bp AGAGGGAACACAAGTGTTGAAACCAGGTCTGAAATCCAAGACCCAAGATGCTTTAGCTCGTTCGTGGCTTaGGTCAAGGGAGAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: RGNTSVETRSEIQDPRCFSSFVA*VKGEQA
Trigger: CGCCTGCTCTCCCTTGACCCAAGCCACGAACGAGCT...AAAGCATCTTGGGTCTTGGATTTCAGACCTGGTTTCAACACTTGTGTTCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp TATGCTGCATCCGACGATTTACTCGGGCCACAACAGGGTCATCATCTTCCTCTAGATCAGGGAAGACGGTaGCACCACCAGCTTCTACAT +
Preference number: 4 (lower is better)
Translates to: YAASDDLLGPQQGHHLPLDQGRR*HHQLLH
Trigger: ATGTAGAAGCTGGTGGTGCCACCGTCTTCCCTGATC...TAGAGGAAGATGATGACCCTGTTGTGGCCCGAGTAAATCGTCGGATGCAGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CCA 90 bp AACCCTGTGATATGCTGCATCCGACGATTTACTCGGGCCACAACAGGGTCATCACATGGAACCACTTATTaGAGACCCACTTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: NPVICCIRRFTRATTGSSHGTTY*RPTCSP
Trigger: TGGGCTGCAAGTGGGTCTCCAATAAGTGGTTCCATG...TGATGACCCTGTTGTGGCCCGAGTAAATCGTCGGATGCAGCATATCACAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTTCCTGTCCTCGTTCATaGAACCACTTATTGGAGACC +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLSCPRS*NHLLET
Trigger: GGTCTCCAATAAGTGGTTCCATGAACGAGGACAGGA...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp GAGGCTCTCGTAAACATCCCTCTCAGGCAGGTAGTCCACAGGCCTCTCATAGATTCCTGTCCTCGTTCATaGAACCACTTATTGGAGACC +
Preference number: 4 (lower is better)
Translates to: EALVNIPLRQVVHRPLIDSCPRS*NHLLET
Trigger: GGTCTCCAATAAGTGGTTCCATGAACGAGGACAGGA...ATCTATGAGAGGCCTGTGGACTACCTGCCTGAGAGGGATGTTTACGAGAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTACACCCAGAGTTTCATaGTCACAGAGGGAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLTPRVS*SQREVS
Trigger: AGACACTTCCCTCTGTGACCATGAAACTCTGGGTGT...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360568.8
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCACATAAGGAATGGCATTaGCCAAGGTCTCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSHKEWH*PRSLLP
Trigger: TGGGAGCAGAGACCTTGGCCAATGCCATTCCTTATG...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR CCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGTGTAGACAGCGTCCGTaGACAGCTATCCCCTACAGT +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLCRQRP*TAIPYS
Trigger: ACTGTAGGGGATAGCTGTCCACGGACGCTGTCTACA...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR CCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAATTCCACAAGGATGTCTaGGGGAGAAAAGACTTTCTG +
Preference number: 4 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQFHKDV*GRKDFL
Trigger: CAGAAAGTCTTTTCTCCCCCAGACATCCTTGTGGAA...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR TCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGACTCAGCATCAGCAGCTaGCTTGCTAGTCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGLSISS*LASQGF
Trigger: GAAGCCTTGACTAGCAAGTCAGCTGCTGATGCTGAG...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGAGCCTGTATGTGTCCTaGAGTCTCATCAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLSLYVS*SLIRAL
Trigger: CAAAGCCCTGATGAGACTTCAGGACACATACAGGCT...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTGTTTTGCGATCTCCTTaGTCCTCTCGATTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLVLRSP*SSRFPH
Trigger: ATGAGGAAATCGAGAGGATCAAGGAGATCGCAAAAC...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTTTACTGTTAACCCTGTaGTATGCTGCATCCGACGAT +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLLLLTL*YAASDD
Trigger: ATCGTCGGATGCAGCATATCACAGGGTTAACAGTAA...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAATCAGTCAACTTCTGTTaGTCCACAAGGTCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQSVNFC*STRSQE
Trigger: TTCTTGAGACCTTGTGGATCAACAGAAGTTGACTGA...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGGGGTTAGCAACTGCTTaGGGTTTCTGGCACACAGAA +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLGLATA*GFWHTE
Trigger: TTCTGTGTGCCAGAAACCGCAAGCAGTTGCTAACCC...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAGTGAAGAATTCGGCCTaGACACAGCTCAGGACACCA +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGVKNSA*TQLRTP
Trigger: TGGTGTCCTGAGCTGTGTGCAGGCCGAATTCTTCAC...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTATCAGGTCAGTCATGTaGCCAATAGAGGTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSIRSVM*PIEVKN
Trigger: ATTCTTCACCTCTATTGGGCACATGACTGACCTGAT...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AGAGGGAACACAAGTGTTGAAACCAGGTCTGAAATCCAAGACCCAAGATGCTTTAGCTCCAGGGCACGGTaGAGATCACCCAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: RGNTSVETRSEIQDPRCFSSRAR*RSPNWK
Trigger: CTTCCAGTTGGGTGATCTGCACCGTGCCCTGGAGCT...AAAGCATCTTGGGTCTTGGATTTCAGACCTGGTTTCAACACTTGTGTTCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAATCTTCCTCCAATAACTaGTCAAAGTACCGCAGATTC +
Preference number: 4 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQSSSNN*SKYRRF
Trigger: GAATCTGCGGTACTTTGAGCAGTTATTGGAGGAAGA...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTTGCAAGTTTAGGTTTTaGGATCTCCTTGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSCKFRF*DLLDPL
Trigger: GAGAGGATCAAGGAGATCGCAAAACCTAAACTTGCA...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAGTTAACCCTGTGATATaGTGCATCCGACGATTTACT +
Preference number: 4 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQVNPVI*CIRRFT
Trigger: AGTAAATCGTCGGATGCAGCATATCACAGGGTTAAC...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp TCTGCAGTCTTTACTGTTAACCCTGTGATATGCTGCATCCGACGATTTACTCGGACGGGTCTCCGCAGCTaGCAAGGAAAAACAACGCTG +
Preference number: 4 (lower is better)
Translates to: SAVFTVNPVICCIRRFTRTGLRS*QGKTTL
Trigger: CAGCGTTGTTTTTCCTTGGCAGCTGCGGAGACCCGT...CCGAGTAAATCGTCGGATGCAGCATATCACAGGGTTAACAGTAAAGACTGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAGTCTCATCAGGGCTTTaGCAGCTCCTATCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGVSSGL*QLLSRP
Trigger: AGGACGAGATAGGAGCTGCCAAAGCCCTGATGAGAC...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAGCATTGCCTGGTACTTaGTTCCTGGAAGTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGALPGT*FLEVPL
Trigger: GAGGGGAACTTCCAGGAACCAAGTACCAGGCAATGC...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp GTGGCTCGTGCAAGTTTAGGTTTTGCGATCTCCTTGATCCTCTCGATTTCCTCAGCATTGCCTGGTACTTaGTTCCTGGAAGTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: VARASLGFAISLILSISSALPGT*FLEVPL
Trigger: GAGGGGAACTTCCAGGAACCAAGTACCAGGCAATGC...TGAGGAAATCGAGAGGATCAAGGAGATCGCAAAACCTAAACTTGCACGAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCAACACTCAGCATTGCCTaGTACTTGGTTCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSTLSIA*YLVPGS
Trigger: ACTTCCAGGAACCAAGTACCAGGCAATGCTGAGTGT...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGCCAGCACCTGTGACTTaGTTGTGGTGGCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRPAPVT*LWWPPP
Trigger: GGGAGGAGGCCACCACAACCAAGTCACAGGTGCTGG...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp CTTCCAGTCTTAAAAATACTCCAAGTAAGGCTCTTTAAGGCTTCTGGTAGGGACGGCAATGAGCAGCTGTaGGGCCCTGTTGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: LPVLKILQVRLFKASGRDGNEQL*GPVAMV
Trigger: CACCATGGCAACAGGGCCCCACAGCTGCTCATTGCC...GTCCCTACCAGAAGCCTTAAAGAGCCTTACTTGGAGTATTTTTAAGACTGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp GTGGCTCGTGCAAGTTTAGGTTTTGCGATCTCCTTGATCCTCTCGATTTCCTCAGCTGAATGGAAGGGCTaGGACTTCAGTCACACAGGA +
Preference number: 4 (lower is better)
Translates to: VARASLGFAISLILSISSAEWKG*DFSHTG
Trigger: TCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC...TGAGGAAATCGAGAGGATCAAGGAGATCGCAAAACCTAAACTTGCACGAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCATATTTCTCATGGTTATaGGAACTGGAAAGTCCGAGA +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMAYFSWL*ELESPR
Trigger: TCTCGGACTTTCCAGTTCCCATAACCATGAGAAATA...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR TCA 90 bp CTTCCAGTCTTAAAAATACTCCAAGTAAGGCTCTTTAAGGCTTCTGGTAGGGACGGTAGCTGGCGACAGTaGGGACTCCTGTCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LPVLKILQVRLFKASGRDGSWRQ*GLLSWD
Trigger: ATCCCAAGACAGGAGTCCTCACTGTCGCCAGCTACC...GTCCCTACCAGAAGCCTTAAAGAGCCTTACTTGGAGTATTTTTAAGACTGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTTCAGTCAACTTCTGTTaGTCCACAAGGTCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLSVNFC*STRSQE
Trigger: TTCTTGAGACCTTGTGGATCAACAGAAGTTGACTGA...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp CTTCCAGTCTTAAAAATACTCCAAGTAAGGCTCTTTAAGGCTTCTGGTAGGGACCACGTTGACATGGGCTaGAGGACCAGGAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LPVLKILQVRLFKASGRDHVDMG*RTRKGK
Trigger: CTTCCCCTTCCTGGTCCTTCAGCCCATGTCAACGTG...GTCCCTACCAGAAGCCTTAAAGAGCCTTACTTGGAGTATTTTTAAGACTGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTAGAACTTTGGTTCACTaGAACATCTCACACCTAAAA +
Preference number: 4 (lower is better)
Translates to: KGWDFSHTGVALVWSPSARTLVH*NISHLK
Trigger: TTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCT...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAAGAACTTTGGTTCACTaGAACATCTCACACCTAAAA +
Preference number: 4 (lower is better)
Translates to: TANSAAATLILALGPGMARTLVH*NISHLK
Trigger: TTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCT...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCATCCAGAAAAGGACACTaGCACTTAGAGGGAACACAA +
Preference number: 4 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSSRKGH*HLEGTQ
Trigger: TTGTGTTCCCTCTAAGTGTCAGTGTCCTTTTCTGGA...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp AGAGGGAACACAAGTGTTGAAACCAGGTCTGAAATCCAAGACCCAAGATGCTTTCCCCTCTGGAAATTGTaGCTGGGTCCAGCCTGTATG +
Preference number: 4 (lower is better)
Translates to: RGNTSVETRSEIQDPRCFPLWKL*LGPACM
Trigger: CATACAGGCTGGACCCAGGCACAATTTCCAGAGGGG...AAAGCATCTTGGGTCTTGGATTTCAGACCTGGTTTCAACACTTGTGTTCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAATCCACACTCAGCATTaGCTGGTACTTGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGIHTQH*LVLGSW
Trigger: CCAGGAACCAAGTACCAGGCAATGCTGAGTGTGGAT...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAAGCTGCTTTAGCACCTaGTCCATCCACAACACCGTA +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGSCFST*SIHNTV
Trigger: TACGGTGTTGTGGATGGAGCAGGTGCTAAAGCAGCT...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGAGCTCCAGGGCACGGTaGAGATCACCCAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRSSRAR*RSPNWK
Trigger: CTTCCAGTTGGGTGATCTGCACCGTGCCCTGGAGCT...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTTCTTCCTCCAATAACTaGTCAAAGTACCGCAGATTC +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLSSSNN*SKYRRF
Trigger: GAATCTGCGGTACTTTGAGCAGTTATTGGAGGAAGA...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTTGCAAGTTTAGGTTTTaGGATCTCCTTGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLCKFRF*DLLDPL
Trigger: GAGAGGATCAAGGAGATCGCAAAACCTAAACTTGCA...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGAACCCTGTGATATGCTaGATCCGACGATTTACTCGG +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLNPVIC*IRRFTR
Trigger: CCGAGTAAATCGTCGGATGCAGCATATCACAGGGTT...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCATCATTATCCAGACTCTaGCTGCATGAAGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSSLSRL*LHEGDA
Trigger: TGCATCACCTTCATGCAGGCAGAGTCTGGATAATGA...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTACGGGTCTCCGCAGCTaGACACTCGCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LPVLWYSPTISINKTECTTGLRS*TLAAPG
Trigger: GCCGGGAGCTGCGAGTGTCCAGCTGCGGAGACCCGT...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401867.5
CDS-3UTR CCA 90 bp AGAGGGAACACAAGTGTTGAAACCAGGTCTGAAATCCAAGACCCAAGATGCTTTTCTCGTCCTCATCAGTaGGGAAGAACTGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: RGNTSVETRSEIQDPRCFSRPHQ*GRTAAA
Trigger: TGCAGCGGCAGTTCTTCCCCACTGATGAGGACGAGA...AAAGCATCTTGGGTCTTGGATTTCAGACCTGGTTTCAACACTTGTGTTCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGGTACTTGGTTCCTaGAAGTTCCCCTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLLVLGS*KFPSGN
Trigger: ATTTCCAGAGGGGAACTTCCAGGAACCAAGTACCAG...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGACATGGAACCACTTATTaGAGACCCACTTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGHGTTY*RPTCSP
Trigger: TGGGCTGCAAGTGGGTCTCCAATAAGTGGTTCCATG...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGACACCCAGAGTTTCATaGTCACAGAGGGAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLTPRVS*SQREVS
Trigger: AGACACTTCCCTCTGTGACCATGAAACTCTGGGTGT...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360568.8
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCTCCGGGAAGTCCTCTaGCCGGAGGCAGTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCLREVL*PEAVSA
Trigger: AGCACTGACTGCCTCCGGCCAGAGGACTTCCCGGAG...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR TCA 90 bp AGAGGGAACACAAGTGTTGAAACCAGGTCTGAAATCCAAGACCCAAGATGCTTTGATAAAACCTGCAGCTaGGTCCTGCAGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: RGNTSVETRSEIQDPRCFDKTCS*VLQDKV
Trigger: GACCTTGTCCTGCAGGACTCAGCTGCAGGTTTTATC...AAAGCATCTTGGGTCTTGGATTTCAGACCTGGTTTCAACACTTGTGTTCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp CTTCCAGTCTTAAAAATACTCCAAGTAAGGCTCTTTAAGGCTTCTGGTAGGGACGGAAGACAGCATAGCTaGGGTAGTCCAGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: LPVLKILQVRLFKASGRDGRQHS*GSPAPV
Trigger: CACAGGTGCTGGACTACCTCAGCTATGCTGTCTTCC...GTCCCTACCAGAAGCCTTAAAGAGCCTTACTTGGAGTATTTTTAAGACTGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTAGAACTTTGGTTCACTaGAACATCTCACACCTAAAA +
Preference number: 4 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSRTLVH*NISHLK
Trigger: TTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCT...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGTCCAGAAAAGGACACTaGCACTTAGAGGGAACACAA +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLSRKGH*HLEGTQ
Trigger: TTGTGTTCCCTCTAAGTGTCAGTGTCCTTTTCTGGA...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACAGCATTACAATCATaGACACATGTGCTATGTTCT +
Preference number: 4 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQTALQS*THVLCS
Trigger: AGAACATAGCACATGTGTTCATGATTGTAATGCTGT...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGCTGTCCAGCAATACCTaGGGCAGGAAGTGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRLSSNT*GRKCPD
Trigger: ATCAGGGCACTTCCTGCCTCAGGTATTGCTGGACAG...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR GCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCAATCAGGTCAGTCATGTaGCCAATAGAGGTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSIRSVM*PIEVKN
Trigger: ATTCTTCACCTCTATTGGGCACATGACTGACCTGAT...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCACACCAGCTCTTTCTCTaGATAAATCAGGTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSHQLFL*INQVSH
Trigger: ATGACTGACCTGATTTATGCAGAGAAAGAGCTGGTG...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGTACTCTTTCAGAGACTaGACCAGCTCTTTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLYSFRD*TSSFSA
Trigger: TGCAGAGAAAGAGCTGGTGCAGTCTCTGAAAGAGTA...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp TATGCTGCATCCGACGATTTACTCGGGCCACAACAGGGTCATCATCTTCCTCTATACTCTTTCAGAGACTaGACCAGCTCTTTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: YAASDDLLGPQQGHHLPLYSFRD*TSSFSA
Trigger: TGCAGAGAAAGAGCTGGTGCAGTCTCTGAAAGAGTA...TAGAGGAAGATGATGACCCTGTTGTGGCCCGAGTAAATCGTCGGATGCAGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR GCA 90 bp AGCATTACAATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTCCTGCAGCTGAGTCCTaGAGGACAAGGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SITIMNTCAMFSGRQRETPAAES*RTRSSS
Trigger: GCTGGAGGACCTTGTCCTGCAGGACTCAGCTGCAGG...AGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATTGTAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCACCTGCAGCTGAGTCCTaGAGGACAAGGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSPAAES*RTRSSS
Trigger: GCTGGAGGACCTTGTCCTGCAGGACTCAGCTGCAGG...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGCCCCTCTGGAAATTGTaGCTGGGTCCAGCCTGTATG +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRPLWKL*LGPACM
Trigger: CATACAGGCTGGACCCAGGCACAATTTCCAGAGGGG...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAAACCCTGTGATATGCTaGATCCGACGATTTACTCGG +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGNPVIC*IRRFTR
Trigger: CCGAGTAAATCGTCGGATGCAGCATATCACAGGGTT...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGCTACCAAGTACCCACTaGCCGCATTCCCTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRLPSTH*PHSLPA
Trigger: TGCTGGAAGGGAATGCGGGCAGTGGGTACTTGGTAG...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR CCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGACTGCTTGCGGTTTCTaGCACACAGAAGGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRTACGF*HTEGSR
Trigger: ACGGGACCCTTCTGTGTGCCAGAAACCGCAAGCAGT...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
CDS-3UTR CCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAACACCCAGAGTTTCATaGTCACAGAGGGAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGTPRVS*SQREVS
Trigger: TGACACTTCCCTCTGTGACCATGAAACTCTGGGTGT...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGTCTCGTCCTCATCAGTaGGGAAGAACTGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRSRPHQ*GRTAAA
Trigger: TGCAGCGGCAGTTCTTCCCCACTGATGAGGACGAGA...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp AGAGGGAACACAAGTGTTGAAACCAGGTCTGAAATCCAAGACCCAAGATGCTTTCTGGAAGTTCCCCTCTaGAAATTGTGCCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: RGNTSVETRSEIQDPRCFLEVPL*KLCLGP
Trigger: TGGACCCAGGCACAATTTCCAGAGGGGAACTTCCAG...AAAGCATCTTGGGTCTTGGATTTCAGACCTGGTTTCAACACTTGTGTTCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp GTGGCTCGTGCAAGTTTAGGTTTTGCGATCTCCTTGATCCTCTCGATTTCCTCAACACTCAGCATTGCCTaGTACTTGGTTCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: VARASLGFAISLILSISSTLSIA*YLVPGS
Trigger: ACTTCCAGGAACCAAGTACCAGGCAATGCTGAGTGT...TGAGGAAATCGAGAGGATCAAGGAGATCGCAAAACCTAAACTTGCACGAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCACCTCCAGCTCGTTCGTaGCTTGGGTCAAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSPPARS*LGSRES
Trigger: GCTCTCCCTTGACCCAAGCCACGAACGAGCTGGAGG...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCCTCCAGCTCGTTCGTaGCTTGGGTCAAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCPPARS*LGSRES
Trigger: GCTCTCCCTTGACCCAAGCCACGAACGAGCTGGAGG...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTGGCAATGAGCAGCTGTaGGGCCCTGTTGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCGNEQL*GPVAMV
Trigger: CACCATGGCAACAGGGCCCCACAGCTGCTCATTGCC...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCAGGCAATGAGCAGCTGTaGGGCCCTGTTGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSGNEQL*GPVAMV
Trigger: CACCATGGCAACAGGGCCCCACAGCTGCTCATTGCC...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGCTAGCCAGGAGCTTTTaGAAACCCGGTAGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRLARSF*KPGSWR
Trigger: TCGCCAGCTACCGGGTTTCCAAAAGCTCCTGGCTAG...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp AATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTATTTACCCACAGAGGGAAGTGTCTaGACACTCGCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: NHEHMCYVLWETKRNYLPTEGSV*TLAAPG
Trigger: GCCGGGAGCTGCGAGTGTCCAGACACTTCCCTCTGT...GGGTAAATAGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR CCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCACATGGTTATGGGAACTaGAAAGTCCGAGATCAAGAT +
Preference number: 4 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSHGYGN*KVRDQD
Trigger: ATCTTGATCTCGGACTTTCCAGTTCCCATAACCATG...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR TCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCAGTAGTCCAGCACCTGTaGCTTGGTTGTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSVVQHL*LGCGGL
Trigger: GAGGCCACCACAACCAAGTCACAGGTGCTGGACTAC...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCATACGGGGTGTCAGTTTaGCACCCTCCCCACGACAGA +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSYGVSV*HPPHDR
Trigger: TCTGTCGTGGGGAGGGTGTCAAACTGACACCCCGTA...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTTACGGGGTGTCAGTTTaGCACCCTCCCCACGACAGA +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCYGVSV*HPPHDR
Trigger: TCTGTCGTGGGGAGGGTGTCAAACTGACACCCCGTA...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGTCAGTCAACTTCTGTTaGTCCACAAGGTCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLSVNFC*STRSQE
Trigger: TTCTTGAGACCTTGTGGATCAACAGAAGTTGACTGA...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp AATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTATTTACCCCACGTTGACATGGGCTaGAGGACCAGGAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: NHEHMCYVLWETKRNYLPHVDMG*RTRKGK
Trigger: CTTCCCCTTCCTGGTCCTTCAGCCCATGTCAACGTG...GGGTAAATAGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCATTGCCAGCCTTCCTCTaGCCACTCCAGCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSLPAFL*PLQLMG
Trigger: ACCCATGAGCTGGAGTGGTCAGAGGAAGGCTGGCAA...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR GCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCACCAGCTCTTTCTCTaGATAAATCAGGTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLHQLFL*INQVSH
Trigger: ATGACTGACCTGATTTATGCAGAGAAAGAGCTGGTG...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGATACTCTTTCAGAGACTaGACCAGCTCTTTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGYSFRD*TSSFSA
Trigger: TGCAGAGAAAGAGCTGGTGCAGTCTCTGAAAGAGTA...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCCTGCAGCTGAGTCCTaGAGGACAAGGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCPAAES*RTRSSS
Trigger: GCTGGAGGACCTTGTCCTGCAGGACTCAGCTGCAGG...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AGCATTACAATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTAGCTCCAGGGCACGGTaGAGATCACCCAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: SITIMNTCAMFSGRQRETSSRAR*RSPNWK
Trigger: CTTCCAGTTGGGTGATCTGCACCGTGCCCTGGAGCT...AGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATTGTAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGCAGGCCTCTCATAGATaGCTTCTGGGGTTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRQASHR*LLGLLA
Trigger: AGCTAGCAACCCCAGAAGGCATCTATGAGAGGCCTG...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGTGCAAGTTTAGGTTTTaGGATCTCCTTGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLCKFRF*DLLDPL
Trigger: GAGAGGATCAAGGAGATCGCAAAACCTAAACTTGCA...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCAAATCATGAACACATGTaGTATGTTCTCTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSNHEHM*YVLWET
Trigger: TGTCTCCCAGAGAACATAGCACATGTGTTCATGATT...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTGCCGGAGGCAGTCAGTaGTCTACCAAGTACCCACTG +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCAGGSQ*STKYPL
Trigger: CAGTGGGTACTTGGTAGAGCACTGACTGCCTCCGGC...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR GCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTGATCCAGGCTCCTGCTaGGAAGGTCAACTGGGCATC +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCDPGSC*EGQLGI
Trigger: GATGCCCAGTTGACCTTCGCAGCAGGAGCCTGGATC...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR CCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTAGTGTCACACTGCTCTaGGCCAGGACCTTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCSVTLL*ARTFPL
Trigger: GAGCGGGAAGGTCCTGGCCCAGAGCAGTGTGACACT...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000428369.6
CDS-3UTR CCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCAGTGTCACACTGCTCTaGGCCAGGACCTTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVSVTLL*ARTFPL
Trigger: GAGCGGGAAGGTCCTGGCCCAGAGCAGTGTGACACT...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGCTGGAAGTTCCCCTCTaGAAATTGTGCCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRLEVPL*KLCLGP
Trigger: TGGACCCAGGCACAATTTCCAGAGGGGAACTTCCAG...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp CTTCCAGTCTTAAAAATACTCCAAGTAAGGCTCTTTAAGGCTTCTGGTAGGGACGCATTGCCTGGTACTTaGTTCCTGGAAGTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LPVLKILQVRLFKASGRDALPGT*FLEVPL
Trigger: GAGGGGAACTTCCAGGAACCAAGTACCAGGCAATGC...GTCCCTACCAGAAGCCTTAAAGAGCCTTACTTGGAGTATTTTTAAGACTGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTGTGACTTGGTTGTGGTaGCCTCCTCCCCGGCATCAA +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCVTWLW*PPPRHQ
Trigger: TTGATGCCGGGGAGGAGGCCACCACAACCAAGTCAC...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCCTGTGACTTGGTTGTaGTGGCCTCCTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCPVTWL*WPPPRH
Trigger: ATGCCGGGGAGGAGGCCACCACAACCAAGTCACAGG...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCCAGCACCTGTGACTTaGTTGTGGTGGCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCPAPVT*LWWPPP
Trigger: GGGAGGAGGCCACCACAACCAAGTCACAGGTGCTGG...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTAGCTCGTTCGTGGCTTaGGTCAAGGGAGAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCSSFVA*VKGEQA
Trigger: CGCCTGCTCTCCCTTGACCCAAGCCACGAACGAGCT...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGTCTGTCACGTTGACATaGGCTGAAGGACCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRSVTLT*AEGPGR
Trigger: CCTTCCTGGTCCTTCAGCCCATGTCAACGTGACAGA...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCAGGAGTCGCCCTAGTATaGTCTCCCTCTGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSGVALV*SPSAPD
Trigger: GTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCC...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTGGAGTCGCCCTAGTATaGTCTCCCTCTGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCGVALV*SPSAPD
Trigger: GTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCC...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTTTCCACAAGGATGTCTaGACACTCGCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCFHKDV*TLAAPG
Trigger: GCCGGGAGCTGCGAGTGTCCAGACATCCTTGTGGAA...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379086.5
ENST00000379100.7
CDS-3UTR CCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAAAGGAAAAACAACGCTaGTTCCACAAGGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGKEKQR*FHKDVW
Trigger: CCAGACATCCTTGTGGAACCAGCGTTGTTTTTCCTT...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379086.5
ENST00000379100.7
ENST00000428369.6
3UTR CAA 72 bp AGGGGAAGGACAGAAAAGGATGTCAGTCAACTTCTGTaGATCCACAAGGTCTCAAGAACTCCTGTCCTCGTT +
Preference number: 4 (lower is better)
Translates to: RGRTEKDVSQLL*IHKVSRTPVLV
Trigger: AACGAGGACAGGAGTTCTTGAGACCTTGTGGATCAACAGAAGTTGACTGACATCCTTTTCTGTCCTTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR TCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGAGCCTGTATGTGTCCTaGAGTCTCATCAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRSLYVS*SLIRAL
Trigger: CAAAGCCCTGATGAGACTTCAGGACACATACAGGCT...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTGGAAGACAGCATAGCTaGGGTAGTCCAGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCGRQHS*GSPAPV
Trigger: CACAGGTGCTGGACTACCTCAGCTATGCTGTCTTCC...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTTACGGGGTGTCAGTTTaGCACCCTCCCCACGACAGA +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCYGVSV*HPPHDR
Trigger: TCTGTCGTGGGGAGGGTGTCAAACTGACACCCCGTA...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCCACGTTGACATGGGCTaGAGGACCAGGAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVHVDMG*RTRKGK
Trigger: CTTCCCCTTCCTGGTCCTTCAGCCCATGTCAACGTG...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTAGGTGTCTGTCACGTTaGCATGGGCTGAAGGACCAG +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCRCLSR*HGLKDQ
Trigger: CTGGTCCTTCAGCCCATGTCAACGTGACAGACACCT...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp AGCATTACAATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTAGGTGTCTGTCACGTTaGCATGGGCTGAAGGACCAG +
Preference number: 4 (lower is better)
Translates to: SITIMNTCAMFSGRQRETRCLSR*HGLKDQ
Trigger: CTGGTCCTTCAGCCCATGTCAACGTGACAGACACCT...AGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATTGTAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCAGGGATGGCACAGGCTaGATGGAAGGGCTGGGACTT +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVRDGTG*MEGLGL
Trigger: AAGTCCCAGCCCTTCCATTCAGCCTGTGCCATCCCT...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTAGGGATGGCACAGGCTaGATGGAAGGGCTGGGACTT +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCRDGTG*MEGLGL
Trigger: AAGTCCCAGCCCTTCCATTCAGCCTGTGCCATCCCT...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCAAGAACTTTGGTTCACTaGAACATCTCACACCTAAAA +
Preference number: 4 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSRTLVH*NISHLK
Trigger: TTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCT...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGCCAGGCCATCAGCAATaGAGACACCCAGAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRPGHQQ*RHPEFH
Trigger: ATGAAACTCTGGGTGTCTGCATTGCTGATGGCCTGG...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAATCAGGTCAGTCATGTaGCCAATAGAGGTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGIRSVM*PIEVKN
Trigger: ATTCTTCACCTCTATTGGGCACATGACTGACCTGAT...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCAGGGAAGAACTGCCGCTaGACAGAGAGGTTGGCGATA +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSGKNCR*TERLAI
Trigger: TATCGCCAACCTCTCTGTGCAGCGGCAGTTCTTCCC...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTTCAGTGGGGAAGAACTaGCGCTGCACAGAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCSVGKN*RCTERL
Trigger: CAACCTCTCTGTGCAGCGGCAGTTCTTCCCCACTGA...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCACCCCTCTGGAAATTGTaGCTGGGTCCAGCCTGTATG +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSPLWKL*LGPACM
Trigger: CATACAGGCTGGACCCAGGCACAATTTCCAGAGGGG...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTATTTACCCCCCCTCTGGAAATTGTaGCTGGGTCCAGCCTGTATG +
Preference number: 4 (lower is better)
Translates to: NHEHMCYVLWETKRNYLPPLWKL*LGPACM
Trigger: CATACAGGCTGGACCCAGGCACAATTTCCAGAGGGG...GGGTAAATAGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGATCCACACTCAGCATTaGCTGGTACTTGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRIHTQH*LVLGSW
Trigger: CCAGGAACCAAGTACCAGGCAATGCTGAGTGTGGAT...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGAGCTGCTTTAGCACCTaGTCCATCCACAACACCGTA +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRSCFST*SIHNTV
Trigger: TACGGTGTTGTGGATGGAGCAGGTGCTAAAGCAGCT...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCATCCCCGGCATCAAGCTaGTTTAGCACCTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSSPASS*FSTCSI
Trigger: GATGGAGCAGGTGCTAAAGCAGCTTGATGCCGGGGA...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGATGCAAGTTTAGGTTTTaGGATCTCCTTGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGCKFRF*DLLDPL
Trigger: GAGAGGATCAAGGAGATCGCAAAACCTAAACTTGCA...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAGTTAACCCTGTGATATaGTGCATCCGACGATTTACT +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGVNPVI*CIRRFT
Trigger: AGTAAATCGTCGGATGCAGCATATCACAGGGTTAAC...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTGCCGGAGGCAGTCAGTaGTCTACCAAGTACCCACTG +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCAGGSQ*STKYPL
Trigger: CAGTGGGTACTTGGTAGAGCACTGACTGCCTCCGGC...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR GCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTTCCACGATGCCCTTTTaGCAGCCTTCCTCTGACCAC +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCSTMPF*QPSSDH
Trigger: GTGGTCAGAGGAAGGCTGGCAAAAGGGCATCGTGGA...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR CCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTATCCGCCTGTCCCACTaGGTTAGCAACTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCIRLSH*VSNCLR
Trigger: CCGCAAGCAGTTGCTAACCCAGTGGGACAGGCGGAT...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCATCCGCCTGTCCCACTaGGTTAGCAACTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVIRLSH*VSNCLR
Trigger: CCGCAAGCAGTTGCTAACCCAGTGGGACAGGCGGAT...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCATCTCGTCCTCATCAGTaGGGAAGAACTGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSSRPHQ*GRTAAA
Trigger: TGCAGCGGCAGTTCTTCCCCACTGATGAGGACGAGA...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CTTCCAGTCTTAAAAATACTCCAAGTAAGGCTCTTTAAGGCTTCTGGTAGGGACTCTGGAAATTGTGCCTaGGTCCAGCCTGTATGTGTC +
Preference number: 4 (lower is better)
Translates to: LPVLKILQVRLFKASGRDSGNCA*VQPVCV
Trigger: GACACATACAGGCTGGACCCAGGCACAATTTCCAGA...GTCCCTACCAGAAGCCTTAAAGAGCCTTACTTGGAGTATTTTTAAGACTGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp AGAGGGAACACAAGTGTTGAAACCAGGTCTGAAATCCAAGACCCAAGATGCTTTCTGGTACTTGGTTCCTaGAAGTTCCCCTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: RGNTSVETRSEIQDPRCFLVLGS*KFPSGN
Trigger: ATTTCCAGAGGGGAACTTCCAGGAACCAAGTACCAG...AAAGCATCTTGGGTCTTGGATTTCAGACCTGGTTTCAACACTTGTGTTCCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp CCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGGAAGGCAATGAGCAGCTGTaGGGCCCTGTTGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: PGENVYNHLGIHYLVKLEGNEQL*GPVAMV
Trigger: CACCATGGCAACAGGGCCCCACAGCTGCTCATTGCC...TTCCAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR CCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTGGAGTCGCCCTAGTATaGTCTCCCTCTGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCGVALV*SPSAPD
Trigger: GTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCC...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp TCAACTTCTGTTGATCCACAAGGTCTCAAGAACTCCTGTCCTCGTTCATGGAACAAGGAAAAACAACGCTaGTTCCACAAGGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: STSVDPQGLKNSCPRSWNKEKQR*FHKDVW
Trigger: CCAGACATCCTTGTGGAACCAGCGTTGTTTTTCCTT...GTTCCATGAACGAGGACAGGAGTTCTTGAGACCTTGTGGATCAACAGAAGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR TCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCACTCAGCATCAGCAGCTaGCTTGCTAGTCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSLSISS*LASQGF
Trigger: GAAGCCTTGACTAGCAAGTCAGCTGCTGATGCTGAG...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCAGATAAAACCTGCAGCTaGGTCCTGCAGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSDKTCS*VLQDKV
Trigger: GACCTTGTCCTGCAGGACTCAGCTGCAGGTTTTATC...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCGGAAGACAGCATAGCTaGGGTAGTCCAGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVGRQHS*GSPAPV
Trigger: CACAGGTGCTGGACTACCTCAGCTATGCTGTCTTCC...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTGGAAGACAGCATAGCTaGGGTAGTCCAGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCGRQHS*GSPAPV
Trigger: CACAGGTGCTGGACTACCTCAGCTATGCTGTCTTCC...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp AGAGGGAACACAAGTGTTGAAACCAGGTCTGAAATCCAAGACCCAAGATGCTTTTTACTGTTAACCCTGTaGTATGCTGCATCCGACGAT +
Preference number: 4 (lower is better)
Translates to: RGNTSVETRSEIQDPRCFLLLTL*YAASDD
Trigger: ATCGTCGGATGCAGCATATCACAGGGTTAACAGTAA...AAAGCATCTTGGGTCTTGGATTTCAGACCTGGTTTCAACACTTGTGTTCCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCAGGTGTCTGTCACGTTaGCATGGGCTGAAGGACCAG +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVRCLSR*HGLKDQ
Trigger: CTGGTCCTTCAGCCCATGTCAACGTGACAGACACCT...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTAGGTGTCTGTCACGTTaGCATGGGCTGAAGGACCAG +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCRCLSR*HGLKDQ
Trigger: CTGGTCCTTCAGCCCATGTCAACGTGACAGACACCT...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp AGCATTACAATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTAAGTGCTGGGGGCAGTaGAGGAGATGTGATCTAGGA +
Preference number: 4 (lower is better)
Translates to: SITIMNTCAMFSGRQRETKCWGQ*RRCDLG
Trigger: TCCTAGATCACATCTCCTTCACTGCCCCCAGCACTT...AGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATTGTAATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTGTGAAGAATTCGGCCTaGACACAGCTCAGGACACCA +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCVKNSA*TQLRTP
Trigger: TGGTGTCCTGAGCTGTGTGCAGGCCGAATTCTTCAC...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTTCAGTGGGGAAGAACTaGCGCTGCACAGAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCSVGKN*RCTERL
Trigger: CAACCTCTCTGTGCAGCGGCAGTTCTTCCCCACTGA...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTCAGTGGGGAAGAACTaGCGCTGCACAGAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVSVGKN*RCTERL
Trigger: CAACCTCTCTGTGCAGCGGCAGTTCTTCCCCACTGA...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCCCCTCTGGAAATTGTaGCTGGGTCCAGCCTGTATG +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCPLWKL*LGPACM
Trigger: CATACAGGCTGGACCCAGGCACAATTTCCAGAGGGG...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTCCCCGGCATCAAGCTaGTTTAGCACCTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVSPASS*FSTCSI
Trigger: GATGGAGCAGGTGCTAAAGCAGCTTGATGCCGGGGA...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCACAGGCCTCTCATAGATaGCTTCTGGGGTTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSQASHR*LLGLLA
Trigger: AGCTAGCAACCCCAGAAGGCATCTATGAGAGGCCTG...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGAACCCTGTGATATGCTaGATCCGACGATTTACTCGG +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRNPVIC*IRRFTR
Trigger: CCGAGTAAATCGTCGGATGCAGCATATCACAGGGTT...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp AGAGGGAACACAAGTGTTGAAACCAGGTCTGAAATCCAAGACCCAAGATGCTTTGCAGTAGATAGCAATTaGCCTAGACCCAGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: RGNTSVETRSEIQDPRCFAVDSN*PRPSGF
Trigger: AAAACCACTGGGTCTAGGGCAATTGCTATCTACTGC...AAAGCATCTTGGGTCTTGGATTTCAGACCTGGTTTCAACACTTGTGTTCCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR GCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTATTGGCCAAGGTCTCTaGTCCCACTCACATAGGCTG +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCIGQGL*SHSHRL
Trigger: CAGCCTATGTGAGTGGGAGCAGAGACCTTGGCCAAT...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR GCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTTGGGCATCTTACACATaGAGGGCACAGTACCAGGCA +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCWASYT*RAQYQA
Trigger: TGCCTGGTACTGTGCCCTGCATGTGTAAGATGCCCA...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR CCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTTCTCGTCCTCATCAGTaGGGAAGAACTGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCSRPHQ*GRTAAA
Trigger: TGCAGCGGCAGTTCTTCCCCACTGATGAGGACGAGA...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTCTCGTCCTCATCAGTaGGGAAGAACTGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVSRPHQ*GRTAAA
Trigger: TGCAGCGGCAGTTCTTCCCCACTGATGAGGACGAGA...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCAGTCTCATCAGGGCTTTaGCAGCTCCTATCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSVSSGL*QLLSRP
Trigger: AGGACGAGATAGGAGCTGCCAAAGCCCTGATGAGAC...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGCTGGTACTTGGTTCCTaGAAGTTCCCCTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRLVLGS*KFPSGN
Trigger: ATTTCCAGAGGGGAACTTCCAGGAACCAAGTACCAG...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCCTAGCCAGGAGCTTTTaGAAACCCGGTAGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVLARSF*KPGSWR
Trigger: TCGCCAGCTACCGGGTTTCCAAAAGCTCCTGGCTAG...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTGATCAGGGAAGACGGTaGCACCACCAGCTTCTACAT +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCDQGRR*HHQLLH
Trigger: ATGTAGAAGCTGGTGGTGCCACCGTCTTCCCTGATC...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGTCCTGTCCTCGTTCATaGAACCACTTATTGGAGACC +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRSCPRS*NHLLET
Trigger: GGTCTCCAATAAGTGGTTCCATGAACGAGGACAGGA...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp CTTCCAGTCTTAAAAATACTCCAAGTAAGGCTCTTTAAGGCTTCTGGTAGGGACTCCTGTCCTCGTTCATaGAACCACTTATTGGAGACC +
Preference number: 4 (lower is better)
Translates to: LPVLKILQVRLFKASGRDSCPRS*NHLLET
Trigger: GGTCTCCAATAAGTGGTTCCATGAACGAGGACAGGA...GTCCCTACCAGAAGCCTTAAAGAGCCTTACTTGGAGTATTTTTAAGACTGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp ACTCCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGGGAGTCGCCCTAGTATaGTCTCCCTCTGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: TPGENVYNHLGIHYLVKLGVALV*SPSAPD
Trigger: GTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCC...CAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR CCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCAGCTGAATGGAAGGGCTaGGACTTCAGTCACACAGGA +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSAEWKG*DFSHTG
Trigger: TCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCAGCTGCGAAGGTCAACTaGGCATCTTACACATGCAGG +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSAAKVN*ASYTCR
Trigger: CCTGCATGTGTAAGATGCCCAGTTGACCTTCGCAGC...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR TCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTGATAAAACCTGCAGCTaGGTCCTGCAGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCDKTCS*VLQDKV
Trigger: GACCTTGTCCTGCAGGACTCAGCTGCAGGTTTTATC...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTAGGTGTCTGTCACGTTaGCATGGGCTGAAGGACCAG +
Preference number: 4 (lower is better)
Translates to: LPVLWYSPTISINKTECTRCLSR*HGLKDQ
Trigger: CTGGTCCTTCAGCCCATGTCAACGTGACAGACACCT...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAAGAACTTTGGTTCACTaGAACATCTCACACCTAAAA +
Preference number: 4 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGRTLVH*NISHLK
Trigger: TTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCT...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCAAGTGCTGGGGGCAGTaGAGGAGATGTGATCTAGGA +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVKCWGQ*RRCDLG
Trigger: TCCTAGATCACATCTCCTTCACTGCCCCCAGCACTT...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTGTGAAGAATTCGGCCTaGACACAGCTCAGGACACCA +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCVKNSA*TQLRTP
Trigger: TGGTGTCCTGAGCTGTGTGCAGGCCGAATTCTTCAC...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGTACTCTTTCAGAGACTaGACCAGCTCTTTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRYSFRD*TSSFSA
Trigger: TGCAGAGAAAGAGCTGGTGCAGTCTCTGAAAGAGTA...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCAATCCACACTCAGCATTaGCTGGTACTTGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSIHTQH*LVLGSW
Trigger: CCAGGAACCAAGTACCAGGCAATGCTGAGTGTGGAT...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTAGCTGCTTTAGCACCTaGTCCATCCACAACACCGTA +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCSCFST*SIHNTV
Trigger: TACGGTGTTGTGGATGGAGCAGGTGCTAAAGCAGCT...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCCAGGCCTCTCATAGATaGCTTCTGGGGTTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVQASHR*LLGLLA
Trigger: AGCTAGCAACCCCAGAAGGCATCTATGAGAGGCCTG...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AGAGGGAACACAAGTGTTGAAACCAGGTCTGAAATCCAAGACCCAAGATGCTTTTGCAAGTTTAGGTTTTaGGATCTCCTTGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: RGNTSVETRSEIQDPRCFCKFRF*DLLDPL
Trigger: GAGAGGATCAAGGAGATCGCAAAACCTAAACTTGCA...AAAGCATCTTGGGTCTTGGATTTCAGACCTGGTTTCAACACTTGTGTTCCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGTTCCCCGTCCCTAAATaGTTGAAAGTATCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRFPVPK*LKVSRS
Trigger: TGAGCGAGATACTTTCAAGCATTTAGGGACGGGGAA...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000166534.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp AGAGGGAACACAAGTGTTGAAACCAGGTCTGAAATCCAAGACCCAAGATGCTTTGTTTCTATTCTCAGCTaGAAGCTCATCCTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: RGNTSVETRSEIQDPRCFVSILS*KLILVV
Trigger: GACTACAAGGATGAGCTTGCAGCTGAGAATAGAAAC...AAAGCATCTTGGGTCTTGGATTTCAGACCTGGTTTCAACACTTGTGTTCCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR GCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTTGGGCATCTTACACATaGAGGGCACAGTACCAGGCA +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCWASYT*RAQYQA
Trigger: TGCCTGGTACTGTGCCCTGCATGTGTAAGATGCCCA...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR CCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCGTCTCATCAGGGCTTTaGCAGCTCCTATCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVVSSGL*QLLSRP
Trigger: AGGACGAGATAGGAGCTGCCAAAGCCCTGATGAGAC...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCGCATTGCCTGGTACTTaGTTCCTGGAAGTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVALPGT*FLEVPL
Trigger: GAGGGGAACTTCCAGGAACCAAGTACCAGGCAATGC...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTCTAGCCAGGAGCTTTTaGAAACCCGGTAGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: LPVLWYSPTISINKTECTLARSF*KPGSWR
Trigger: TCGCCAGCTACCGGGTTTCCAAAAGCTCCTGGCTAG...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp AATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTATTTACCCCATGGAACCACTTATTaGAGACCCACTTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: NHEHMCYVLWETKRNYLPHGTTY*RPTCSP
Trigger: TGGGCTGCAAGTGGGTCTCCAATAAGTGGTTCCATG...GGGTAAATAGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCACATGGAACCACTTATTaGAGACCCACTTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSHGTTY*RPTCSP
Trigger: TGGGCTGCAAGTGGGTCTCCAATAAGTGGTTCCATG...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AGCATTACAATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTCATGGAACCACTTATTaGAGACCCACTTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SITIMNTCAMFSGRQRETHGTTY*RPTCSP
Trigger: TGGGCTGCAAGTGGGTCTCCAATAAGTGGTTCCATG...AGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATTGTAATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCGCTGAATGGAAGGGCTaGGACTTCAGTCACACAGGA +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVAEWKG*DFSHTG
Trigger: TCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGAAGGAAAAACAACGCTaGTTCCACAAGGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRKEKQR*FHKDVW
Trigger: CCAGACATCCTTGTGGAACCAGCGTTGTTTTTCCTT...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379086.5
ENST00000379100.7
CDS-3UTR CCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCATAAGGAATGGCATTaGCCAAGGTCTCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCHKEWH*PRSLLP
Trigger: TGGGAGCAGAGACCTTGGCCAATGCCATTCCTTATG...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR TCA 90 bp ACTCCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGCTCAGCATCAGCAGCTaGCTTGCTAGTCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: TPGENVYNHLGIHYLVKLLSISS*LASQGF
Trigger: GAAGCCTTGACTAGCAAGTCAGCTGCTGATGCTGAG...CAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR TCA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTCTCAGCATCAGCAGCTaGCTTGCTAGTCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LPVLWYSPTISINKTECTLSISS*LASQGF
Trigger: GAAGCCTTGACTAGCAAGTCAGCTGCTGATGCTGAG...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp CCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGGAAGATAAAACCTGCAGCTaGGTCCTGCAGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: PGENVYNHLGIHYLVKLEDKTCS*VLQDKV
Trigger: GACCTTGTCCTGCAGGACTCAGCTGCAGGTTTTATC...TTCCAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR TCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCAGCCTGTATGTGTCCTaGAGTCTCATCAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVSLYVS*SLIRAL
Trigger: CAAAGCCCTGATGAGACTTCAGGACACATACAGGCT...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp CTTCCAGTCTTAAAAATACTCCAAGTAAGGCTCTTTAAGGCTTCTGGTAGGGACTCAGTCAACTTCTGTTaGTCCACAAGGTCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: LPVLKILQVRLFKASGRDSVNFC*STRSQE
Trigger: TTCTTGAGACCTTGTGGATCAACAGAAGTTGACTGA...GTCCCTACCAGAAGCCTTAAAGAGCCTTACTTGGAGTATTTTTAAGACTGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCCAGGCCATCAGCAATaGAGACACCCAGAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCPGHQQ*RHPEFH
Trigger: ATGAAACTCTGGGTGTCTGCATTGCTGATGGCCTGG...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGCACCAGCTCTTTCTCTaGATAAATCAGGTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRHQLFL*INQVSH
Trigger: ATGACTGACCTGATTTATGCAGAGAAAGAGCTGGTG...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTAGCTGCTTTAGCACCTaGTCCATCCACAACACCGTA +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCSCFST*SIHNTV
Trigger: TACGGTGTTGTGGATGGAGCAGGTGCTAAAGCAGCT...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp CCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGGAACAGGCCTCTCATAGATaGCTTCTGGGGTTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: PGENVYNHLGIHYLVKLEQASHR*LLGLLA
Trigger: AGCTAGCAACCCCAGAAGGCATCTATGAGAGGCCTG...TTCCAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR GCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCAAACCCTGTGATATGCTaGATCCGACGATTTACTCGG +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSNPVIC*IRRFTR
Trigger: CCGAGTAAATCGTCGGATGCAGCATATCACAGGGTT...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGGTTAACCCTGTGATATaGTGCATCCGACGATTTACT +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRVNPVI*CIRRFT
Trigger: AGTAAATCGTCGGATGCAGCATATCACAGGGTTAAC...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTTATCCAGACTCTGCCTaGATGAAGGTGATGCATAGG +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCYPDSA*MKVMHR
Trigger: CCTATGCATCACCTTCATGCAGGCAGAGTCTGGATA...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp AGAGGGAACACAAGTGTTGAAACCAGGTCTGAAATCCAAGACCCAAGATGCTTTAATCATGAACACATGTaGTATGTTCTCTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: RGNTSVETRSEIQDPRCFNHEHM*YVLWET
Trigger: TGTCTCCCAGAGAACATAGCACATGTGTTCATGATT...AAAGCATCTTGGGTCTTGGATTTCAGACCTGGTTTCAACACTTGTGTTCCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp CTTCCAGTCTTAAAAATACTCCAAGTAAGGCTCTTTAAGGCTTCTGGTAGGGACTTATCAGCAGCATGCTaGCTGTATTATGGTACAGTC +
Preference number: 4 (lower is better)
Translates to: LPVLKILQVRLFKASGRDLSAAC*LYYGTV
Trigger: GACTGTACCATAATACAGGCAGCATGCTGCTGATAA...GTCCCTACCAGAAGCCTTAAAGAGCCTTACTTGGAGTATTTTTAAGACTGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCCCTTCCCCATCACCTTaGTTCCACTACAAGGCCATA +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVPSPSP*FHYKAI
Trigger: TATGGCCTTGTAGTGGAAGCAAGGTGATGGGGAAGG...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR CCA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTGTCTCATCAGGGCTTTaGCAGCTCCTATCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: LPVLWYSPTISINKTECTVSSGL*QLLSRP
Trigger: AGGACGAGATAGGAGCTGCCAAAGCCCTGATGAGAC...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTCTGGAAATTGTGCCTaGGTCCAGCCTGTATGTGTC +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVSGNCA*VQPVCV
Trigger: GACACATACAGGCTGGACCCAGGCACAATTTCCAGA...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTTCTGGAAATTGTGCCTaGGTCCAGCCTGTATGTGTC +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCSGNCA*VQPVCV
Trigger: GACACATACAGGCTGGACCCAGGCACAATTTCCAGA...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTACACTCAGCATTGCCTaGTACTTGGTTCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCTLSIA*YLVPGS
Trigger: ACTTCCAGGAACCAAGTACCAGGCAATGCTGAGTGT...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CCA 90 bp AGCATTACAATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTACACTCAGCATTGCCTaGTACTTGGTTCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SITIMNTCAMFSGRQRETTLSIA*YLVPGS
Trigger: ACTTCCAGGAACCAAGTACCAGGCAATGCTGAGTGT...AGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATTGTAATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTTCTGTCACGTTGACATaGGCTGAAGGACCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPVLWYSPTISINKTECTSVTLT*AEGPGR
Trigger: CCTTCCTGGTCCTTCAGCCCATGTCAACGTGACAGA...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp ACTCCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGTCTGTCACGTTGACATaGGCTGAAGGACCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: TPGENVYNHLGIHYLVKLSVTLT*AEGPGR
Trigger: CCTTCCTGGTCCTTCAGCCCATGTCAACGTGACAGA...CAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR CCA 90 bp AATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTATTTACCCGTTAGGGTCTACCAATaGAAGCCACTAGAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: NHEHMCYVLWETKRNYLPVRVYQ*KPLEGD
Trigger: ATCTCCCTCTAGTGGCTTCCATTGGTAGACCCTAAC...GGGTAAATAGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR CCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCAGTTAGGGTCTACCAATaGAAGCCACTAGAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSVRVYQ*KPLEGD
Trigger: ATCTCCCTCTAGTGGCTTCCATTGGTAGACCCTAAC...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR TCA 90 bp AGCATTACAATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTGTTTTGCGATCTCCTTaGTCCTCTCGATTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SITIMNTCAMFSGRQRETVLRSP*SSRFPH
Trigger: ATGAGGAAATCGAGAGGATCAAGGAGATCGCAAAAC...AGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATTGTAATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTGTTTTGCGATCTCCTTaGTCCTCTCGATTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCVLRSP*SSRFPH
Trigger: ATGAGGAAATCGAGAGGATCAAGGAGATCGCAAAAC...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCCGTCCCTAAATGCTTaGAAGTATCTCGCTCATCAT +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCPSLNA*KYLAHH
Trigger: ATGATGAGCGAGATACTTTCAAGCATTTAGGGACGG...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000166534.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGGAGTACCACACATCATaGGACAATGATTTATCTCCA +
Preference number: 4 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQREYHTS*DNDLSP
Trigger: TGGAGATAAATCATTGTCTCATGATGTGTGGTACTC...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp CCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGGAACCAGGCCATCAGCAATaGAGACACCCAGAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: PGENVYNHLGIHYLVKLEPGHQQ*RHPEFH
Trigger: ATGAAACTCTGGGTGTCTGCATTGCTGATGGCCTGG...TTCCAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR GCA 90 bp CCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGGAAATCCACACTCAGCATTaGCTGGTACTTGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PGENVYNHLGIHYLVKLEIHTQH*LVLGSW
Trigger: CCAGGAACCAAGTACCAGGCAATGCTGAGTGTGGAT...TTCCAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR GCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTTTCCCCGTCCCTAAATaGTTGAAAGTATCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCFPVPK*LKVSRS
Trigger: TGAGCGAGATACTTTCAAGCATTTAGGGACGGGGAA...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000166534.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCACACCCAGAGTTTCATaGTCACAGAGGGAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVTPRVS*SQREVS
Trigger: TGACACTTCCCTCTGTGACCATGAAACTCTGGGTGT...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000428369.6
CDS-3UTR CCA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTTCTGGAAATTGTGCCTaGGTCCAGCCTGTATGTGTC +
Preference number: 4 (lower is better)
Translates to: LPVLWYSPTISINKTECTSGNCA*VQPVCV
Trigger: GACACATACAGGCTGGACCCAGGCACAATTTCCAGA...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCCTGGTACTTGGTTCCTaGAAGTTCCCCTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVLVLGS*KFPSGN
Trigger: ATTTCCAGAGGGGAACTTCCAGGAACCAAGTACCAG...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTGTTTTGCGATCTCCTTaGTCCTCTCGATTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCVLRSP*SSRFPH
Trigger: ATGAGGAAATCGAGAGGATCAAGGAGATCGCAAAAC...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTTACTGTTAACCCTGTaGTATGCTGCATCCGACGAT +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVLLLTL*YAASDD
Trigger: ATCGTCGGATGCAGCATATCACAGGGTTAACAGTAA...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCCGTCCCTAAATGCTTaGAAGTATCTCGCTCATCAT +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCPSLNA*KYLAHH
Trigger: ATGATGAGCGAGATACTTTCAAGCATTTAGGGACGG...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000166534.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTTCAGTCAACTTCTGTTaGTCCACAAGGTCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCSVNFC*STRSQE
Trigger: TTCTTGAGACCTTGTGGATCAACAGAAGTTGACTGA...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTATTTACCCATCAGGTCAGTCATGTaGCCAATAGAGGTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: NHEHMCYVLWETKRNYLPIRSVM*PIEVKN
Trigger: ATTCTTCACCTCTATTGGGCACATGACTGACCTGAT...GGGTAAATAGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp AGCATTACAATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTCACCAGCTCTTTCTCTaGATAAATCAGGTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: SITIMNTCAMFSGRQRETHQLFL*INQVSH
Trigger: ATGACTGACCTGATTTATGCAGAGAAAGAGCTGGTG...AGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATTGTAATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCATCTTCCTCCAATAACTaGTCAAAGTACCGCAGATTC +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSSSSNN*SKYRRF
Trigger: GAATCTGCGGTACTTTGAGCAGTTATTGGAGGAAGA...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTTGCAAGTTTAGGTTTTaGGATCTCCTTGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCCKFRF*DLLDPL
Trigger: GAGAGGATCAAGGAGATCGCAAAACCTAAACTTGCA...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCAAGTATGGTCTCCCTCTaGTCCAGACAAACATTCATT +
Preference number: 4 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSSMVSL*SRQTFI
Trigger: AATGAATGTTTGTCTGGAGCAGAGGGAGACCATACT...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp AGCATTACAATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTAGTATGGTCTCCCTCTaGTCCAGACAAACATTCATT +
Preference number: 4 (lower is better)
Translates to: SITIMNTCAMFSGRQRETSMVSL*SRQTFI
Trigger: AATGAATGTTTGTCTGGAGCAGAGGGAGACCATACT...AGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATTGTAATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp CCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGGAACTGGTACTTGGTTCCTaGAAGTTCCCCTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: PGENVYNHLGIHYLVKLELVLGS*KFPSGN
Trigger: ATTTCCAGAGGGGAACTTCCAGGAACCAAGTACCAG...TTCCAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR CCA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTTCCTGTCCTCGTTCATaGAACCACTTATTGGAGACC +
Preference number: 4 (lower is better)
Translates to: LPVLWYSPTISINKTECTSCPRS*NHLLET
Trigger: GGTCTCCAATAAGTGGTTCCATGAACGAGGACAGGA...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CCA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTACACCCAGAGTTTCATaGTCACAGAGGGAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LPVLWYSPTISINKTECTTPRVS*SQREVS
Trigger: AGACACTTCCCTCTGTGACCATGAAACTCTGGGTGT...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp CCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGGAACCGTCCCTAAATGCTTaGAAGTATCTCGCTCATCAT +
Preference number: 4 (lower is better)
Translates to: PGENVYNHLGIHYLVKLEPSLNA*KYLAHH
Trigger: ATGATGAGCGAGATACTTTCAAGCATTTAGGGACGG...TTCCAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379104.7
CDS-3UTR TCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTTCAGTCAACTTCTGTTaGTCCACAAGGTCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCSVNFC*STRSQE
Trigger: TTCTTGAGACCTTGTGGATCAACAGAAGTTGACTGA...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR TCA 90 bp AATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTATTTACCCGAGTACCACACATCATaGGACAATGATTTATCTCCA +
Preference number: 4 (lower is better)
Translates to: NHEHMCYVLWETKRNYLPEYHTS*DNDLSP
Trigger: TGGAGATAAATCATTGTCTCATGATGTGTGGTACTC...GGGTAAATAGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCGGAGAAAAGACTTTCTaGTCCAATGGCCCATCTAAT +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVGEKTF*SNGPSN
Trigger: ATTAGATGGGCCATTGGATCAGAAAGTCTTTTCTCC...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR GCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCATCAGGTCAGTCATGTaGCCAATAGAGGTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVIRSVM*PIEVKN
Trigger: ATTCTTCACCTCTATTGGGCACATGACTGACCTGAT...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCCACCAGCTCTTTCTCTaGATAAATCAGGTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVHQLFL*INQVSH
Trigger: ATGACTGACCTGATTTATGCAGAGAAAGAGCTGGTG...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ACTCCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGTACTCTTTCAGAGACTaGACCAGCTCTTTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: TPGENVYNHLGIHYLVKLYSFRD*TSSFSA
Trigger: TGCAGAGAAAGAGCTGGTGCAGTCTCTGAAAGAGTA...CAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR GCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTTCTTCCTCCAATAACTaGTCAAAGTACCGCAGATTC +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCSSSNN*SKYRRF
Trigger: GAATCTGCGGTACTTTGAGCAGTTATTGGAGGAAGA...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGCAAGTTTAGGTTTTaGGATCTCCTTGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVCKFRF*DLLDPL
Trigger: GAGAGGATCAAGGAGATCGCAAAACCTAAACTTGCA...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTGTTAACCCTGTGATATaGTGCATCCGACGATTTACT +
Preference number: 4 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCVNPVI*CIRRFT
Trigger: AGTAAATCGTCGGATGCAGCATATCACAGGGTTAAC...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTTTCCCCGTCCCTAAATaGTTGAAAGTATCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: LPVLWYSPTISINKTECTFPVPK*LKVSRS
Trigger: TGAGCGAGATACTTTCAAGCATTTAGGGACGGGGAA...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCAGTATGGTCTCCCTCTaGTCCAGACAAACATTCATT +
Preference number: 4 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVSMVSL*SRQTFI
Trigger: AATGAATGTTTGTCTGGAGCAGAGGGAGACCATACT...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR GCA 90 bp ACTCCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGGCAGTAGATAGCAATTaGCCTAGACCCAGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: TPGENVYNHLGIHYLVKLAVDSN*PRPSGF
Trigger: AAAACCACTGGGTCTAGGGCAATTGCTATCTACTGC...CAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR CCA 90 bp AATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTATTTACCCTATTTCTCATGGTTATaGGAACTGGAAAGTCCGAGA +
Preference number: 4 (lower is better)
Translates to: NHEHMCYVLWETKRNYLPYFSWL*ELESPR
Trigger: TCTCGGACTTTCCAGTTCCCATAACCATGAGAAATA...GGGTAAATAGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR TCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTAGAACTTTGGTTCACTaGAACATCTCACACCTAAAA +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCRTLVH*NISHLK
Trigger: TTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCT...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTACAGCATTACAATCATaGACACATGTGCTATGTTCT +
Preference number: 4 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCTALQS*THVLCS
Trigger: AGAACATAGCACATGTGTTCATGATTGTAATGCTGT...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR TCA 90 bp AATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTATTTACCCACAGCATTACAATCATaGACACATGTGCTATGTTCT +
Preference number: 4 (lower is better)
Translates to: NHEHMCYVLWETKRNYLPTALQS*THVLCS
Trigger: AGAACATAGCACATGTGTTCATGATTGTAATGCTGT...GGGTAAATAGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTGTTAACCCTGTGATATaGTGCATCCGACGATTTACT +
Preference number: 4 (lower is better)
Translates to: LPVLWYSPTISINKTECTVNPVI*CIRRFT
Trigger: AGTAAATCGTCGGATGCAGCATATCACAGGGTTAAC...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTTTATCAGCAGCATGCTaGCTGTATTATGGTACAGTC +
Preference number: 4 (lower is better)
Translates to: LPVLWYSPTISINKTECTLSAAC*LYYGTV
Trigger: GACTGTACCATAATACAGGCAGCATGCTGCTGATAA...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR GCA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTGTTTCTATTCTCAGCTaGAAGCTCATCCTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: LPVLWYSPTISINKTECTVSILS*KLILVV
Trigger: GACTACAAGGATGAGCTTGCAGCTGAGAATAGAAAC...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR CCA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTCATGGTTATGGGAACTaGAAAGTCCGAGATCAAGAT +
Preference number: 4 (lower is better)
Translates to: LPVLWYSPTISINKTECTHGYGN*KVRDQD
Trigger: ATCTTGATCTCGGACTTTCCAGTTCCCATAACCATG...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
3UTR CAA 72 bp CTTTCAGAAGAGAACACAGGAAACATCCTCATGATCTaGGGGTATAGAAGGATTTCTCAAATAAGACATAAA +
Preference number: 4 (lower is better)
Translates to: LSEENTGNILMI*GYRRISQIRHK
Trigger: TTTATGTCTTATTTGAGAAATCCTTCTATACCCCAAGATCATGAGGATGTTTCCTGTGTTCTCTTCTGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS GCA 90 bp GCGGCGGCACAAGAACCCAGACGGGTGCAGAAACAGGGCGGAGGGTaGAGGGTGGCGGCCCGGACTGCGCTGCTGGCGGCTAGCGGCGCG +
Preference number: 5 (lower is better)
Translates to: AAAQEPRRVQKQGGG*RVAARTALLAASGA
Trigger: CGCGCCGCTAGCCGCCAGCAGCGCAGTCCGGGCCGCCACCCTGCACCCTCCGCCCTGTTTCTGCACCCGTCTGGGTTCTTGTGCCGCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417528.5
CDS CCA 90 bp CACAAGAACCCAGACGGGTGCAGAAACAGGGCGGAGGGTGCAGGGTaGCGGCCCGGACTGCGCTGCTGGCGGCTAGCGGCGCGACCCCCG +
Preference number: 5 (lower is better)
Translates to: HKNPDGCRNRAEGAG*RPGLRCWRLAARPP
Trigger: CGGGGGTCGCGCCGCTAGCCGCCAGCAGCGCAGTCCGGGCCGCCACCCTGCACCCTCCGCCCTGTTTCTGCACCCGTCTGGGTTCTTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417528.5
CDS GCA 90 bp TTATCACGGGTCTCCGCAGCTCACCACCCTGAGCTCGGGAAGGCTTaGGGGCGGCGGCACAAGAACCCAGACGGGTGCAGAAACAGGGCG +
Preference number: 5 (lower is better)
Translates to: LSRVSAAHHPELGKA*GRRHKNPDGCRNRA
Trigger: CGCCCTGTTTCTGCACCCGTCTGGGTTCTTGTGCCGCCGCCCGCAAGCCTTCCCGAGCTCAGGGTGGTGAGCTGCGGAGACCCGTGATAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417528.5
CDS GCA 90 bp AGTACCCACTGCCCGCATTCCCTTCCAGCACAGCGCTCACCACACTaGTCTGGGCCAGGACCTTCCCGCTCTTCCAATCCGCCTGTCCCA +
Preference number: 5 (lower is better)
Translates to: STHCPHSLPAQRSPH*SGPGPSRSSNPPVP
Trigger: TGGGACAGGCGGATTGGAAGAGCGGGAAGGTCCTGGCCCAGAGCAGTGTGGTGAGCGCTGTGCTGGAAGGGAATGCGGGCAGTGGGTACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379100.7
ENST00000401867.5
ENST00000453286.5
CDS GCA 90 bp CATGGGTCACCTCCTCCGGGAAGTCCTCTGGCCGGAGGCAGTCAGTaGTCTACCAAGTACCCACTGCCCGCATTCCCTTCCAGCACAGCG +
Preference number: 5 (lower is better)
Translates to: HGSPPPGSPLAGGSQ*STKYPLPAFPSSTA
Trigger: CGCTGTGCTGGAAGGGAATGCGGGCAGTGGGTACTTGGTAGAGCACTGACTGCCTCCGGCCAGAGGACTTCCCGGAGGAGGTGACCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379100.7
ENST00000401867.5
ENST00000453286.5
CDS-3UTR CAA 90 bp TACCGCAGATTCCCTCCAGCTCGTTCGTGGCTTGGGTCAAGGGAGAGCAGGCGGCAGCTCGTTCGTGGCTaGGGTCAAGGGAGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: YRRFPPARSWLGSRESRRQLVRG*GQGRAG
Trigger: GCCTGCTCTCCCTTGACCCAAGCCACGAACGAGCTG...CCGCCTGCTCTCCCTTGACCCAAGCCACGAACGAGCTGGAGGGAATCTGCGGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS CCA 90 bp GCTCTGGGCCAGGACCTTCCCGCTCTTCCAATCCGCCTGTCCCACTaGGTTAGCAACTGCTTGCGGTTTCTGGCACACAGAAGGGTCCCG +
Preference number: 5 (lower is better)
Translates to: ALGQDLPALPIRLSH*VSNCLRFLAHRRVP
Trigger: CGGGACCCTTCTGTGTGCCAGAAACCGCAAGCAGTTGCTAACCCAGTGGGACAGGCGGATTGGAAGAGCGGGAAGGTCCTGGCCCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000417528.5
ENST00000418055.5
ENST00000428369.6
ENST00000428841.1
ENST00000453286.5
ENST00000478055.1
CDS-3UTR CAA 90 bp GTCCCACTCGTCCTCCTCTTTGAAGGGGGCAATGAGCAGCTGTGGGGCCCTGTTGTTCCCCTCTGGAAATaGTGCCTGGGTCCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: VPLVLLFEGGNEQLWGPVVPLWK*CLGPAC
Trigger: ACAGGCTGGACCCAGGCACAATTTCCAGAGGGGAAC...AACAGGGCCCCACAGCTGCTCATTGCCCCCTTCAAAGAGGAGGACGAGTGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CAA 90 bp CAGGGCAGGCAGCATGTCTTGTTCGGTAGTCACCTTCCCCGCTCCGCAAGAGGTGTGAGGACTCCTGTCTaGGGATCACGAACGGTGGCT +
Preference number: 5 (lower is better)
Translates to: QGRQHVLFGSHLPRSARGVRTPV*GSRTVA
Trigger: AGCCACCGTTCGTGATCCCAAGACAGGAGTCCTCAC...ACCTCTTGCGGAGCGGGGAAGGTGACTACCGAACAAGACATGCTGCCTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CAA 90 bp CAGGGCAGGCAGCATGTCTTGTTCGGTAGTCACCTTCCCCGCTCCGCAAGAGGTGGCAGGCAGCATGTCTaGTTCGGTAGTCACCTTCCC +
Preference number: 5 (lower is better)
Translates to: QGRQHVLFGSHLPRSARGGRQHV*FGSHLP
Trigger: GGGAAGGTGACTACCGAACAAGACATGCTGCCTGCC...ACCTCTTGCGGAGCGGGGAAGGTGACTACCGAACAAGACATGCTGCCTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CAA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTGCACCTGTGACTTGGTaGTGGTGGCCTCCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLAPVTW*WWPPPR
Trigger: CCGGGGAGGAGGCCACCACAACCAAGTCACAGGTGC...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAACAGCTCGTTCGTGGCTaGGGTCAAGGGAGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQQLVRG*GQGRAG
Trigger: GCCTGCTCTCCCTTGACCCAAGCCACGAACGAGCTG...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCTACGGGGTGTCAGTTaGACACCCTCCCCACGACAG +
Preference number: 5 (lower is better)
Translates to: KGWDFSHTGVALVWSPSALRGVS*TPSPRQ
Trigger: CTGTCGTGGGGAGGGTGTCAAACTGACACCCCGTAG...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS CCA 90 bp GAGGCAGGAAGTGCCCTGATCCAGGCTCCTGCTGCGAAGGTCAACTaGGCATCTTACACATGCAGGGCACAGTACCAGGCACGTTATCTC +
Preference number: 5 (lower is better)
Translates to: EAGSALIQAPAAKVN*ASYTCRAQYQARYL
Trigger: GAGATAACGTGCCTGGTACTGTGCCCTGCATGTGTAAGATGCCCAGTTGACCTTCGCAGCAGGAGCCTGGATCAGGGCACTTCCTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR CAA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTTCCAGCACCTGTGACTaGGTTGTGGTGGCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSSSTCD*VVVASS
Trigger: GGAGGAGGCCACCACAACCAAGTCACAGGTGCTGGA...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAATCCAGCACCTGTGACTaGGTTGTGGTGGCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQSSTCD*VVVASS
Trigger: GGAGGAGGCCACCACAACCAAGTCACAGGTGCTGGA...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAACTACGGGGTGTCAGTTaGACACCCTCCCCACGACAG +
Preference number: 5 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQLRGVS*TPSPRQ
Trigger: CTGTCGTGGGGAGGGTGTCAAACTGACACCCCGTAG...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAAGCTGTGGGGCCCTGTaGCCATGGTGGTACCTACAG +
Preference number: 5 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQSCGAL*PWWYLQ
Trigger: CTGTAGGTACCACCATGGCAACAGGGCCCCACAGCT...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCACACTCGTCCTCCTCTTaGAAGGGGGCAATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: TANSAAATLILALGPGMAHSSSS*KGAMSS
Trigger: GCTGCTCATTGCCCCCTTCAAAGAGGAGGACGAGTG...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAGTGAGGACTCCTGTCTaGGGATCACGAACGGTGGCT +
Preference number: 5 (lower is better)
Translates to: TANSAAATLILALGPGMAVRTPV*GSRTVA
Trigger: AGCCACCGTTCGTGATCCCAAGACAGGAGTCCTCAC...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAGGCAGGCAGCATGTCTaGTTCGGTAGTCACCTTCCC +
Preference number: 5 (lower is better)
Translates to: TANSAAATLILALGPGMAGRQHV*FGSHLP
Trigger: GGGAAGGTGACTACCGAACAAGACATGCTGCCTGCC...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTACTTTGATCCTAGCCTaGGGGCCAGGGATGGCACAG +
Preference number: 5 (lower is better)
Translates to: KGWDFSHTGVALVWSPSATLILA*GPGMAQ
Trigger: CTGTGCCATCCCTGGCCCCAAGGCTAGGATCAAAGT...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTTCTGCTGCAGCCACTTaGATCCTAGCCTTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: KGWDFSHTGVALVWSPSASAAAT*ILALGP
Trigger: TGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGA...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCATCTGCTGCAGCCACTTaGATCCTAGCCTTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: TANSAAATLILALGPGMASAAAT*ILALGP
Trigger: TGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGA...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp TACCGCAGATTCCCTCCAGCTCGTTCGTGGCTTGGGTCAAGGGAGAGCAGGCGGCTATTCCCCTCTGTTTaGAGGCCGCTGTCAAAAGGT +
Preference number: 5 (lower is better)
Translates to: YRRFPPARSWLGSRESRRLFPSV*RPLSKG
Trigger: ACCTTTTGACAGCGGCCTCAAAACAGAGGGGAATAG...CCGCCTGCTCTCCCTTGACCCAAGCCACGAACGAGCTGGAGGGAATCTGCGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS TCA 90 bp GGAAGTGTCTGGGCTGTCCAGCAATACCTGAGGCAGGAAGTGCCCTaGTCCAGGCTCCTGCTGCGAAGGTCAACTGGGCATCTTACACAT +
Preference number: 5 (lower is better)
Translates to: GSVWAVQQYLRQEVP*SRLLLRRSTGHLTH
Trigger: ATGTGTAAGATGCCCAGTTGACCTTCGCAGCAGGAGCCTGGATCAGGGCACTTCCTGCCTCAGGTATTGCTGGACAGCCCAGACACTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS GCA 90 bp TTGGCAGCTCCTATCTCGTCCTCATCAGTGGGGAAGAACTGCCGCTaGACAGAGAGGTTGGCGATAAAACCTGCAGCTGAGTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LAAPISSSSVGKNCR*TERLAIKPAAESCR
Trigger: CCTGCAGGACTCAGCTGCAGGTTTTATCGCCAACCTCTCTGTGCAGCGGCAGTTCTTCCCCACTGATGAGGACGAGATAGGAGCTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000395164.5
ENST00000401867.5
ENST00000417528.5
ENST00000428369.6
ENST00000431054.5
ENST00000439698.5
ENST00000453286.5
CDS GCA 90 bp AGGGCTTTGGCAGCTCCTATCTCGTCCTCATCAGTGGGGAAGAACTaGCGCTGCACAGAGAGGTTGGCGATAAAACCTGCAGCTGAGTCC +
Preference number: 5 (lower is better)
Translates to: RALAAPISSSSVGKN*RCTERLAIKPAAES
Trigger: GGACTCAGCTGCAGGTTTTATCGCCAACCTCTCTGTGCAGCGGCAGTTCTTCCCCACTGATGAGGACGAGATAGGAGCTGCCAAAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000395164.5
ENST00000401867.5
ENST00000417528.5
ENST00000428369.6
ENST00000431054.5
ENST00000439698.5
ENST00000453286.5
CDS GCA 90 bp CAAGGTCTCTGCTCCCACTCACATAGGCTGTTCCTCTGTCCACGATaGCCTTTTGCCAGCCTTCCTCTGACCACTCCAGCTCATGGGTCA +
Preference number: 5 (lower is better)
Translates to: QGLCSHSHRLFLCPR*PFASLPLTTPAHGS
Trigger: TGACCCATGAGCTGGAGTGGTCAGAGGAAGGCTGGCAAAAGGGCATCGTGGACAGAGGAACAGCCTATGTGAGTGGGAGCAGAGACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS CCA 90 bp TGCCTGGGTCCAGCCTGTATGTGTCCTGAAGTCTCATCAGGGCTTTaGCAGCTCCTATCTCGTCCTCATCAGTGGGGAAGAACTGCCGCT +
Preference number: 5 (lower is better)
Translates to: CLGPACMCPEVSSGL*QLLSRPHQWGRTAA
Trigger: AGCGGCAGTTCTTCCCCACTGATGAGGACGAGATAGGAGCTGCCAAAGCCCTGATGAGACTTCAGGACACATACAGGCTGGACCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000395164.5
ENST00000401867.5
ENST00000417528.5
ENST00000428369.6
ENST00000431054.5
ENST00000439698.5
ENST00000453286.5
CDS-3UTR CAA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCACGCTGCACAGAGAGGTaGGCGATAAAACCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: TANSAAATLILALGPGMARCTER*AIKPAA
Trigger: AGCTGCAGGTTTTATCGCCAACCTCTCTGTGCAGCG...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAAGTCTCATCAGGGCTTaGGCAGCTCCTATCTCGTCC +
Preference number: 5 (lower is better)
Translates to: TANSAAATLILALGPGMASLIRA*AAPISS
Trigger: GGACGAGATAGGAGCTGCCAAAGCCCTGATGAGACT...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAGTTCCCCTCTGGAAATaGTGCCTGGGTCCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQVPLWK*CLGPAC
Trigger: ACAGGCTGGACCCAGGCACAATTTCCAGAGGGGAAC...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTGTTCCCCTCTGGAAATaGTGCCTGGGTCCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSVPLWK*CLGPAC
Trigger: ACAGGCTGGACCCAGGCACAATTTCCAGAGGGGAAC...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCACAGCTCGTTCGTGGCTaGGGTCAAGGGAGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSQLVRG*GQGRAG
Trigger: GCCTGCTCTCCCTTGACCCAAGCCACGAACGAGCTG...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCACTCGTCCTCCTCTTaGAAGGGGGCAATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSHSSSS*KGAMSS
Trigger: GCTGCTCATTGCCCCCTTCAAAGAGGAGGACGAGTG...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CTGTCCCACTCGTCCTCCTCTTTGAAGGGGGCAATGAGCAGCTGTGGGGCCCTGGGTTTTGCGATCTCCTaGATCCTCTCGATTTCCTCA +
Preference number: 5 (lower is better)
Translates to: LSHSSSSLKGAMSSCGALGFAIS*ILSISS
Trigger: TGAGGAAATCGAGAGGATCAAGGAGATCGCAAAACC...CAGGGCCCCACAGCTGCTCATTGCCCCCTTCAAAGAGGAGGACGAGTGGGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CAA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTGTGAGGACTCCTGTCTaGGGATCACGAACGGTGGCT +
Preference number: 5 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSVRTPV*GSRTVA
Trigger: AGCCACCGTTCGTGATCCCAAGACAGGAGTCCTCAC...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCGCTCCGCAAGAGGTaGTACCAGAACACAGCTGTA +
Preference number: 5 (lower is better)
Translates to: KGWDFSHTGVALVWSPSAPLRKR*YQNTAV
Trigger: TACAGCTGTGTTCTGGTACAACCTCTTGCGGAGCGG...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp TCTTTGAAGGGGGCAATGAGCAGCTGTGGGGCCCTGTTGCCATGGTGGTACCTACCGCTCCGCAAGAGGTaGTACCAGAACACAGCTGTA +
Preference number: 5 (lower is better)
Translates to: SLKGAMSSCGALLPWWYLPLRKR*YQNTAV
Trigger: TACAGCTGTGTTCTGGTACAACCTCTTGCGGAGCGG...TAGGTACCACCATGGCAACAGGGCCCCACAGCTGCTCATTGCCCCCTTCAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CAA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTGGCAGGCAGCATGTCTaGTTCGGTAGTCACCTTCCC +
Preference number: 5 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSGRQHV*FGSHLP
Trigger: GGGAAGGTGACTACCGAACAAGACATGCTGCCTGCC...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCATTATTGGAGACCCACTaGCAGCCCACAAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: TANSAAATLILALGPGMALLETH*QPTSTG
Trigger: CCCTGTGCTTGTGGGCTGCAAGTGGGTCTCCAATAA...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTTTATTGGAGACCCACTaGCAGCCCACAAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: KGWDFSHTGVALVWSPSALLETH*QPTSTG
Trigger: CCCTGTGCTTGTGGGCTGCAAGTGGGTCTCCAATAA...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTACTTTGATCCTAGCCTaGGGGCCAGGGATGGCACAG +
Preference number: 5 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSTLILA*GPGMAQ
Trigger: CTGTGCCATCCCTGGCCCCAAGGCTAGGATCAAAGT...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS TCA 90 bp GGGACTCCAGCAACAGAGACATTTCCCAGAAAGCACCTACCTTTCTaGGGTAGAAGTCTGGGAACTCACCCGCCCCTGAAGGGACTTCCC +
Preference number: 5 (lower is better)
Translates to: GTPATETFPRKHLPF*GRSLGTHPPLKGLP
Trigger: GGGAAGTCCCTTCAGGGGCGGGTGAGTTCCCAGACTTCTACCTCAGAAAGGTAGGTGCTTTCTGGGAAATGTCTCTGTTGCTGGAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474628.1
CDS TCA 90 bp ACTGTGCTCAGGGACCTGACTGCAAGCATCACAGAAGCTCTGCCCTaGGCAGAAACACCCTCATTTTCCCATGGACAGGGGATAGGGCTC +
Preference number: 5 (lower is better)
Translates to: TVLRDLTASITEALP*AETPSFSHGQGIGL
Trigger: GAGCCCTATCCCCTGTCCATGGGAAAATGAGGGTGTTTCTGCTCAGGGCAGAGCTTCTGTGATGCTTGCAGTCAGGTCCCTGAGCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474628.1
CDS GCA 90 bp CTGATCCAGGCTCCTGCTGCGAAGGTCAACTGGGCATCTTACACATaGAGGGCACAGTACCAGGCACGTTATCTCACTCCAGGGTCTTGT +
Preference number: 5 (lower is better)
Translates to: LIQAPAAKVNWASYT*RAQYQARYLTPGSC
Trigger: ACAAGACCCTGGAGTGAGATAACGTGCCTGGTACTGTGCCCTGCATGTGTAAGATGCCCAGTTGACCTTCGCAGCAGGAGCCTGGATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS-3UTR CAA 90 bp AAGCACAGGGCAGGCAGCATGTCTTGTTCGGTAGTCACCTTCCCCGCTCCGCAAGCATCAGCAGCTGACTaGCTAGTCAAGGCTTCCATT +
Preference number: 5 (lower is better)
Translates to: KHRAGSMSCSVVTFPAPQASAAD*LVKASI
Trigger: AATGGAAGCCTTGACTAGCAAGTCAGCTGCTGATGC...TTGCGGAGCGGGGAAGGTGACTACCGAACAAGACATGCTGCCTGCCCTGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CAA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCGCTGCACAGAGAGGTaGGCGATAAAACCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSRCTER*AIKPAA
Trigger: AGCTGCAGGTTTTATCGCCAACCTCTCTGTGCAGCG...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAACGCTGCACAGAGAGGTaGGCGATAAAACCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQRCTER*AIKPAA
Trigger: AGCTGCAGGTTTTATCGCCAACCTCTCTGTGCAGCG...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAAGTCTCATCAGGGCTTaGGCAGCTCCTATCTCGTCC +
Preference number: 5 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQSLIRA*AAPISS
Trigger: GGACGAGATAGGAGCTGCCAAAGCCCTGATGAGACT...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp TTCGGTAGTCACCTTCCCCGCTCCGCAAGAGGTTGTACCAGAACACAGCTGTACAGTCTCATCAGGGCTTaGGCAGCTCCTATCTCGTCC +
Preference number: 5 (lower is better)
Translates to: FGSHLPRSARGCTRTQLYSLIRA*AAPISS
Trigger: GGACGAGATAGGAGCTGCCAAAGCCCTGATGAGACT...GTACAGCTGTGTTCTGGTACAACCTCTTGCGGAGCGGGGAAGGTGACTACCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CAA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCAGCTCGTTCGTGGCTaGGGTCAAGGGAGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLQLVRG*GQGRAG
Trigger: GCCTGCTCTCCCTTGACCCAAGCCACGAACGAGCTG...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AACCCTGTGATATGCTGCATCCGACGATTTACTCGGGCCACAACAGGGTCATCAAGCTGTGGGGCCCTGTaGCCATGGTGGTACCTACAG +
Preference number: 5 (lower is better)
Translates to: NPVICCIRRFTRATTGSSSCGAL*PWWYLQ
Trigger: CTGTAGGTACCACCATGGCAACAGGGCCCCACAGCT...TGATGACCCTGTTGTGGCCCGAGTAAATCGTCGGATGCAGCATATCACAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CAA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCGCTCCGCAAGAGGTaGTACCAGAACACAGCTGTA +
Preference number: 5 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSPLRKR*YQNTAV
Trigger: TACAGCTGTGTTCTGGTACAACCTCTTGCGGAGCGG...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAATTATTGGAGACCCACTaGCAGCCCACAAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQLLETH*QPTSTG
Trigger: CCCTGTGCTTGTGGGCTGCAAGTGGGTCTCCAATAA...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCATCATGGAACCACTTATaGGAGACCCACTTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: TANSAAATLILALGPGMASWNHL*ETHLQP
Trigger: GGGCTGCAAGTGGGTCTCCAATAAGTGGTTCCATGA...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTAAGGTGTCTGTCACGTaGACATGGGCTGAAGGACCA +
Preference number: 5 (lower is better)
Translates to: KGWDFSHTGVALVWSPSAKVSVT*TWAEGP
Trigger: TGGTCCTTCAGCCCATGTCAACGTGACAGACACCTT...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTTCTGCTGCAGCCACTTaGATCCTAGCCTTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLSAAAT*ILALGP
Trigger: TGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGA...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp GAGGCTCTCGTAAACATCCCTCTCAGGCAGGTAGTCCACAGGCCTCTCATAGATTCTGCTGCAGCCACTTaGATCCTAGCCTTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: EALVNIPLRQVVHRPLIDSAAAT*ILALGP
Trigger: TGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGA...ATCTATGAGAGGCCTGTGGACTACCTGCCTGAGAGGGATGTTTACGAGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CAA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTAGGTACAAAGGCACCTaGCTAGGCGCTAGACAGCTA +
Preference number: 5 (lower is better)
Translates to: KGWDFSHTGVALVWSPSARYKGT*LGARQL
Trigger: TAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS TCA 90 bp GTAGGCATTCACAGGGTGAGCCAGGTAGCCCTCAGCATCAGCAGCTaGCTTGCTAGTCAAGGCTTCCATTTTGTTGGCCCAGCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: VGIHRVSQVALSISS*LASQGFHFVGPAVE
Trigger: TTCCACAGCTGGGCCAACAAAATGGAAGCCTTGACTAGCAAGTCAGCTGCTGATGCTGAGGGCTACCTGGCTCACCCTGTGAATGCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478055.1
CDS GCA 90 bp GACCTTCCCGCTCTTCCAATCCGCCTGTCCCACTGGGTTAGCAACTaGTTGCGGTTTCTGGCACACAGAAGGGTCCCGTTTGTTGAATTA +
Preference number: 5 (lower is better)
Translates to: DLPALPIRLSHWVSN*LRFLAHRRVPFVEL
Trigger: TAATTCAACAAACGGGACCCTTCTGTGTGCCAGAAACCGCAAGCAGTTGCTAACCCAGTGGGACAGGCGGATTGGAAGAGCGGGAAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000417528.5
ENST00000418055.5
ENST00000428369.6
ENST00000428841.1
ENST00000453286.5
ENST00000478055.1
CDS GCA 90 bp TCATGGTCACAGAGGGAAGTGTATAGGCTGTTCCTCTGTCCACGATaGCCTTTTGCCAGCCTTCCTCTGACCACTCCAGCTCATGGGTCA +
Preference number: 5 (lower is better)
Translates to: SWSQREVYRLFLCPR*PFASLPLTTPAHGS
Trigger: TGACCCATGAGCTGGAGTGGTCAGAGGAAGGCTGGCAAAAGGGCATCGTGGACAGAGGAACAGCCTATACACTTCCCTCTGTGACCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453286.5
CDS GCA 90 bp GGTTCTCTGAGGGAGAATGCTTGTGCACCCTCTCTGGGCCAACAATaGTTCATGCTTGAATGCCCAATGTCACAGCTCTCCGCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: GSLRENACAPSLGQQ*FMLECPMSQLSAVS
Trigger: GCTGACTGCGGAGAGCTGTGACATTGGGCATTCAAGCATGAAGCATTGTTGGCCCAGAGAGGGTGCACAAGCATTCTCCCTCAGAGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471826.1
CDS CCA 90 bp TGCCTGGTACTTGGTTCCTGGAAGTTCCCCTCTGGAAATTGTGCCTaGGTCCAGCCTGTATGTGTCCTGAAGTCTCATCAGGGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: CLVLGSWKFPSGNCA*VQPVCVLKSHQGFG
Trigger: GCCAAAGCCCTGATGAGACTTCAGGACACATACAGGCTGGACCCAGGCACAATTTCCAGAGGGGAACTTCCAGGAACCAAGTACCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000395164.5
ENST00000401867.5
ENST00000417528.5
ENST00000428369.6
ENST00000431054.5
ENST00000439698.5
CDS CCA 90 bp CCCCACATCACCCTCTCAAAGGTTTCCTCTTATAGGCACCCTGGATaGCTTCCTTGTTCCTTGAGGGGCAGAAGGGAAGGAAGGCCAACT +
Preference number: 5 (lower is better)
Translates to: PHITLSKVSSYRHPG*LPCSLRGRREGRPT
Trigger: AGTTGGCCTTCCTTCCCTTCTGCCCCTCAAGGAACAAGGAAGCCATCCAGGGTGCCTATAAGAGGAAACCTTTGAGAGGGTGATGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478055.1
CDS-3UTR CAA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTTGGGTTAGCAACTGCTaGCGGTTTCTGGCACACAGA +
Preference number: 5 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSWVSNC*RFLAHR
Trigger: TCTGTGTGCCAGAAACCGCAAGCAGTTGCTAACCCA...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAGCATCAGCAGCTGACTaGCTAGTCAAGGCTTCCATT +
Preference number: 5 (lower is better)
Translates to: TANSAAATLILALGPGMAASAAD*LVKASI
Trigger: AATGGAAGCCTTGACTAGCAAGTCAGCTGCTGATGC...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTCGCTGCACAGAGAGGTaGGCGATAAAACCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLRCTER*AIKPAA
Trigger: AGCTGCAGGTTTTATCGCCAACCTCTCTGTGCAGCG...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCAGTTCCCCTCTGGAAATaGTGCCTGGGTCCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSVPLWK*CLGPAC
Trigger: ACAGGCTGGACCCAGGCACAATTTCCAGAGGGGAAC...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAAGCATTGCCTGGTACTaGGTTCCTGGAAGTTCCCCT +
Preference number: 5 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQSIAWY*VPGSSP
Trigger: AGGGGAACTTCCAGGAACCAAGTACCAGGCAATGCT...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAACATCCACACTCAGCATaGCCTGGTACTTGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQHPHSA*PGTWFL
Trigger: CAGGAACCAAGTACCAGGCAATGCTGAGTGTGGATG...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTACGGGGTGTCAGTTaGACACCCTCCCCACGACAG +
Preference number: 5 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLLRGVS*TPSPRQ
Trigger: CTGTCGTGGGGAGGGTGTCAAACTGACACCCCGTAG...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCACACTCGTCCTCCTCTTaGAAGGGGGCAATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSHSSSS*KGAMSS
Trigger: GCTGCTCATTGCCCCCTTCAAAGAGGAGGACGAGTG...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCAGTGAGGACTCCTGTCTaGGGATCACGAACGGTGGCT +
Preference number: 5 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSVRTPV*GSRTVA
Trigger: AGCCACCGTTCGTGATCCCAAGACAGGAGTCCTCAC...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTCCGCTCCGCAAGAGGTaGTACCAGAACACAGCTGTA +
Preference number: 5 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLPLRKR*YQNTAV
Trigger: TACAGCTGTGTTCTGGTACAACCTCTTGCGGAGCGG...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTTTATTGGAGACCCACTaGCAGCCCACAAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLLLETH*QPTSTG
Trigger: CCCTGTGCTTGTGGGCTGCAAGTGGGTCTCCAATAA...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTTCATGGAACCACTTATaGGAGACCCACTTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSSWNHL*ETHLQP
Trigger: GGGCTGCAAGTGGGTCTCCAATAAGTGGTTCCATGA...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCAACTTTGATCCTAGCCTaGGGGCCAGGGATGGCACAG +
Preference number: 5 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSTLILA*GPGMAQ
Trigger: CTGTGCCATCCCTGGCCCCAAGGCTAGGATCAAAGT...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAAGGTACAAAGGCACCTaGCTAGGCGCTAGACAGCTA +
Preference number: 5 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQRYKGT*LGARQL
Trigger: TAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS TCA 90 bp AGTTCCCCTCTGGAAATTGTGCCTGGGTCCAGCCTGTATGTGTCCTaGAGTCTCATCAGGGCTTTGGCAGCTCCTATCTCGTCCTCATCA +
Preference number: 5 (lower is better)
Translates to: SSPLEIVPGSSLYVS*SLIRALAAPISSSS
Trigger: TGATGAGGACGAGATAGGAGCTGCCAAAGCCCTGATGAGACTTCAGGACACATACAGGCTGGACCCAGGCACAATTTCCAGAGGGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000395164.5
ENST00000401867.5
ENST00000417528.5
ENST00000428369.6
ENST00000431054.5
ENST00000439698.5
CDS GCA 90 bp GCATTGCCTGGTACTTGGTTCCTGGAAGTTCCCCTCTGGAAATTGTaGCTGGGTCCAGCCTGTATGTGTCCTGAAGTCTCATCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: ALPGTWFLEVPLWKL*LGPACMCPEVSSGL
Trigger: AAGCCCTGATGAGACTTCAGGACACATACAGGCTGGACCCAGGCACAATTTCCAGAGGGGAACTTCCAGGAACCAAGTACCAGGCAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000395164.5
ENST00000401867.5
ENST00000417528.5
ENST00000428369.6
ENST00000431054.5
ENST00000439698.5
CDS-3UTR CAA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTTGGGTTAGCAACTGCTaGCGGTTTCTGGCACACAGA +
Preference number: 5 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLWVSNC*RFLAHR
Trigger: TCTGTGTGCCAGAAACCGCAAGCAGTTGCTAACCCA...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCACGCTGCACAGAGAGGTaGGCGATAAAACCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSRCTER*AIKPAA
Trigger: AGCTGCAGGTTTTATCGCCAACCTCTCTGTGCAGCG...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTCATCCACACTCAGCATaGCCTGGTACTTGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLHPHSA*PGTWFL
Trigger: CAGGAACCAAGTACCAGGCAATGCTGAGTGTGGATG...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGACTACGGGGTGTCAGTTaGACACCCTCCCCACGACAG +
Preference number: 5 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGLRGVS*TPSPRQ
Trigger: CTGTCGTGGGGAGGGTGTCAAACTGACACCCCGTAG...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAAGCTGTGGGGCCCTGTaGCCATGGTGGTACCTACAG +
Preference number: 5 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGSCGAL*PWWYLQ
Trigger: CTGTAGGTACCACCATGGCAACAGGGCCCCACAGCT...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCACTCGTCCTCCTCTTaGAAGGGGGCAATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLHSSSS*KGAMSS
Trigger: GCTGCTCATTGCCCCCTTCAAAGAGGAGGACGAGTG...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAGGTTTTGCGATCTCCTaGATCCTCTCGATTTCCTCA +
Preference number: 5 (lower is better)
Translates to: TANSAAATLILALGPGMAGFAIS*ILSISS
Trigger: TGAGGAAATCGAGAGGATCAAGGAGATCGCAAAACC...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGGTGAGGACTCCTGTCTaGGGATCACGAACGGTGGCT +
Preference number: 5 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLVRTPV*GSRTVA
Trigger: AGCCACCGTTCGTGATCCCAAGACAGGAGTCCTCAC...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCACCGCTCCGCAAGAGGTaGTACCAGAACACAGCTGTA +
Preference number: 5 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSPLRKR*YQNTAV
Trigger: TACAGCTGTGTTCTGGTACAACCTCTTGCGGAGCGG...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCATTATTGGAGACCCACTaGCAGCCCACAAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSLLETH*QPTSTG
Trigger: CCCTGTGCTTGTGGGCTGCAAGTGGGTCTCCAATAA...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGTCTGCTGCAGCCACTTaGATCCTAGCCTTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLSAAAT*ILALGP
Trigger: TGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGA...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS TCA 90 bp GTAGGCATTCACAGGGTGAGCCAGGTAGCCCTCAGCATCAGCAGCTaGCTTGCTAGTCAAGGCTTCCATTTTGTTGGCCCAGCTCTTAAT +
Preference number: 5 (lower is better)
Translates to: VGIHRVSQVALSISS*LASQGFHFVGPALN
Trigger: ATTAAGAGCTGGGCCAACAAAATGGAAGCCTTGACTAGCAAGTCAGCTGCTGATGCTGAGGGCTACCTGGCTCACCCTGTGAATGCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000395164.5
ENST00000401867.5
ENST00000416053.5
ENST00000417528.5
ENST00000418055.5
ENST00000428369.6
ENST00000431054.5
ENST00000439698.5
ENST00000453286.5
CDS TCA 90 bp AGTGACTCCTTAGCCCATGTACTTAGCTCCTCTCAAGCACTGGCATaGAGTAACCAGGCCAGCCCCACATCACCCTCTCAAAGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: SDSLAHVLSSSQALA*SNQASPTSPSQRFP
Trigger: AGGAAACCTTTGAGAGGGTGATGTGGGGCTGGCCTGGTTACTTCATGCCAGTGCTTGAGAGGAGCTAAGTACATGGGCTAAGGAGTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478055.1
CDS GCA 90 bp TGCTTCCACTACAAGGCCATAAGGAATGGCATTGGCCAAGGTCTCTaGTCCCACTCACATAGGCTGTTCCTCTGTCCACGATGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: CFHYKAIRNGIGQGL*SHSHRLFLCPRCPF
Trigger: AAAAGGGCATCGTGGACAGAGGAACAGCCTATGTGAGTGGGAGCAGAGACCTTGGCCAATGCCATTCCTTATGGCCTTGTAGTGGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS CCA 90 bp CCTTCCCCGCTCCGCAAGAGGTTGTACCAGAACACAGCTGTACCCTaGGAAAGAGATGGCCTTTCAGAACACATTCTTAAGAGACTGTGC +
Preference number: 5 (lower is better)
Translates to: PSPLRKRLYQNTAVP*ERDGLSEHILKRLC
Trigger: GCACAGTCTCTTAAGAATGTGTTCTGAAAGGCCATCTCTTTCCCAGGGTACAGCTGTGTTCTGGTACAACCTCTTGCGGAGCGGGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474628.1
CDS-3UTR CAA 90 bp AACCCTGTGATATGCTGCATCCGACGATTTACTCGGGCCACAACAGGGTCATCATGGGTTAGCAACTGCTaGCGGTTTCTGGCACACAGA +
Preference number: 5 (lower is better)
Translates to: NPVICCIRRFTRATTGSSWVSNC*RFLAHR
Trigger: TCTGTGTGCCAGAAACCGCAAGCAGTTGCTAACCCA...TGATGACCCTGTTGTGGCCCGAGTAAATCGTCGGATGCAGCATATCACAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CAA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAAAGGCTTCCATTTTGTaGGCCCAGCTCTTAATCTTG +
Preference number: 5 (lower is better)
Translates to: TANSAAATLILALGPGMAKASIL*AQLLIL
Trigger: CAAGATTAAGAGCTGGGCCAACAAAATGGAAGCCTT...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTAAGGCTTCCATTTTGTaGGCCCAGCTCTTAATCTTG +
Preference number: 5 (lower is better)
Translates to: KGWDFSHTGVALVWSPSAKASIL*AQLLIL
Trigger: CAAGATTAAGAGCTGGGCCAACAAAATGGAAGCCTT...AGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCGCTGCACAGAGAGGTaGGCGATAAAACCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLRCTER*AIKPAA
Trigger: AGCTGCAGGTTTTATCGCCAACCTCTCTGTGCAGCG...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGAGTCTCATCAGGGCTTaGGCAGCTCCTATCTCGTCC +
Preference number: 5 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLSLIRA*AAPISS
Trigger: GGACGAGATAGGAGCTGCCAAAGCCCTGATGAGACT...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCAAGCATTGCCTGGTACTaGGTTCCTGGAAGTTCCCCT +
Preference number: 5 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSSIAWY*VPGSSP
Trigger: AGGGGAACTTCCAGGAACCAAGTACCAGGCAATGCT...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAGGTTTTGCGATCTCCTaGATCCTCTCGATTTCCTCA +
Preference number: 5 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQGFAIS*ILSISS
Trigger: TGAGGAAATCGAGAGGATCAAGGAGATCGCAAAACC...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAGTGAGGACTCCTGTCTaGGGATCACGAACGGTGGCT +
Preference number: 5 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGVRTPV*GSRTVA
Trigger: AGCCACCGTTCGTGATCCCAAGACAGGAGTCCTCAC...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AACCCTGTGATATGCTGCATCCGACGATTTACTCGGGCCACAACAGGGTCATCATCATGGAACCACTTATaGGAGACCCACTTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: NPVICCIRRFTRATTGSSSWNHL*ETHLQP
Trigger: GGGCTGCAAGTGGGTCTCCAATAAGTGGTTCCATGA...TGATGACCCTGTTGTGGCCCGAGTAAATCGTCGGATGCAGCATATCACAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CAA 90 bp ACAGCTAACTCTGCTGCAGCCACTTTGATCCTAGCCTTGGGGCCAGGGATGGCAGTCAGTCAACTTCTGTaGATCCACAAGGTCTCAAGA +
Preference number: 5 (lower is better)
Translates to: TANSAAATLILALGPGMAVSQLL*IHKVSR
Trigger: TCTTGAGACCTTGTGGATCAACAGAAGTTGACTGAC...TGCCATCCCTGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGAGTTAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAATTTTCTAACTTGGTGTaGACACAGGTGCTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQFSNLV*TQVLLL
Trigger: GAGCAGGAGCACCTGTGTCAACACCAAGTTAGAAAA...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS CCA 90 bp GCAGCTGACTTGCTAGTCAAGGCTTCCATTTTGTTGGCCCAGCTGTaGAACCAGAGGAAAAGGAAGACTAATGCGTCCACCCACATAGGT +
Preference number: 5 (lower is better)
Translates to: AADLLVKASILLAQL*NQRKRKTNASTHIG
Trigger: ACCTATGTGGGTGGACGCATTAGTCTTCCTTTTCCTCTGGTTCCACAGCTGGGCCAACAAAATGGAAGCCTTGACTAGCAAGTCAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478055.1
CDS-3UTR CAA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTTTAATCTTGGAAAGCTaGGCTTCCTCCACAAGGATG +
Preference number: 5 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSLILES*ASSTRM
Trigger: CATCCTTGTGGAGGAAGCCAAGCTTTCCAAGATTAA...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp TTCGGTAGTCACCTTCCCCGCTCCGCAAGAGGTTGTACCAGAACACAGCTGTACAAGGCTTCCATTTTGTaGGCCCAGCTCTTAATCTTG +
Preference number: 5 (lower is better)
Translates to: FGSHLPRSARGCTRTQLYKASIL*AQLLIL
Trigger: CAAGATTAAGAGCTGGGCCAACAAAATGGAAGCCTT...GTACAGCTGTGTTCTGGTACAACCTCTTGCGGAGCGGGGAAGGTGACTACCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CAA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTGTCAAGGCTTCCATTTaGTTGGCCCAGCTCTTAATC +
Preference number: 5 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLVKASI*LAQLLI
Trigger: GATTAAGAGCTGGGCCAACAAAATGGAAGCCTTGAC...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCAGCATCAGCAGCTGACTaGCTAGTCAAGGCTTCCATT +
Preference number: 5 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSASAAD*LVKASI
Trigger: AATGGAAGCCTTGACTAGCAAGTCAGCTGCTGATGC...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGAGCATTGCCTGGTACTaGGTTCCTGGAAGTTCCCCT +
Preference number: 5 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLSIAWY*VPGSSP
Trigger: AGGGGAACTTCCAGGAACCAAGTACCAGGCAATGCT...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGCAGCTCGTTCGTGGCTaGGGTCAAGGGAGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRQLVRG*GQGRAG
Trigger: GCCTGCTCTCCCTTGACCCAAGCCACGAACGAGCTG...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTGGTTTTGCGATCTCCTaGATCCTCTCGATTTCCTCA +
Preference number: 5 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLGFAIS*ILSISS
Trigger: TGAGGAAATCGAGAGGATCAAGGAGATCGCAAAACC...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTCCCGTCCCTAAATGCTaGAAAGTATCTCGCTCATCA +
Preference number: 5 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLPVPKC*KVSRSS
Trigger: TGATGAGCGAGATACTTTCAAGCATTTAGGGACGGG...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000166534.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAGTCAGTCAACTTCTGTaGATCCACAAGGTCTCAAGA +
Preference number: 5 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQVSQLL*IHKVSR
Trigger: TCTTGAGACCTTGTGGATCAACAGAAGTTGACTGAC...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGAAGGTGTCTGTCACGTaGACATGGGCTGAAGGACCA +
Preference number: 5 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLKVSVT*TWAEGP
Trigger: TGGTCCTTCAGCCCATGTCAACGTGACAGACACCTT...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGAGGTACAAAGGCACCTaGCTAGGCGCTAGACAGCTA +
Preference number: 5 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLRYKGT*LGARQL
Trigger: TAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS CCA 90 bp ACAAGGTATATAGATTGCCCTCCTCTCAGCATGAGTGACACTACTTaGTGTCTGCTCCATGGCCAGCCCTTTAGCCAAGAAAGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: TRYIDCPPLSMSDTT*CLLHGQPFSQERLF
Trigger: GAAGAGCCTTTCTTGGCTAAAGGGCTGGCCATGGAGCAGACACCAAGTAGTGTCACTCATGCTGAGAGGAGGGCAATCTATATACCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467587.1
CDS-3UTR CAA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGATGGGTTAGCAACTGCTaGCGGTTTCTGGCACACAGA +
Preference number: 5 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGWVSNC*RFLAHR
Trigger: TCTGTGTGCCAGAAACCGCAAGCAGTTGCTAACCCA...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AGGCCGCTGTCAAAAGGTCGCCTAGAGAAGTCGAAGTGCGGTTCATACTGTCCTTTAATCTTGGAAAGCTaGGCTTCCTCCACAAGGATG +
Preference number: 5 (lower is better)
Translates to: RPLSKGRLEKSKCGSYCPLILES*ASSTRM
Trigger: CATCCTTGTGGAGGAAGCCAAGCTTTCCAAGATTAA...AGGACAGTATGAACCGCACTTCGACTTCTCTAGGCGACCTTTTGACAGCGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CAA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTAAGGCTTCCATTTTGTaGGCCCAGCTCTTAATCTTG +
Preference number: 5 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLKASIL*AQLLIL
Trigger: CAAGATTAAGAGCTGGGCCAACAAAATGGAAGCCTT...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGGCATCAGCAGCTGACTaGCTAGTCAAGGCTTCCATT +
Preference number: 5 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLASAAD*LVKASI
Trigger: AATGGAAGCCTTGACTAGCAAGTCAGCTGCTGATGC...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCAGCACCTGTGACTTGGTaGTGGTGGCCTCCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSAPVTW*WWPPPR
Trigger: CCGGGGAGGAGGCCACCACAACCAAGTCACAGGTGC...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTGCACCTGTGACTTGGTaGTGGTGGCCTCCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCAPVTW*WWPPPR
Trigger: CCGGGGAGGAGGCCACCACAACCAAGTCACAGGTGC...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AGCATTACAATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTGCACCTGTGACTTGGTaGTGGTGGCCTCCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: SITIMNTCAMFSGRQRETAPVTW*WWPPPR
Trigger: CCGGGGAGGAGGCCACCACAACCAAGTCACAGGTGC...AGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATTGTAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGTCCAGCACCTGTGACTaGGTTGTGGTGGCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRSSTCD*VVVASS
Trigger: GGAGGAGGCCACCACAACCAAGTCACAGGTGCTGGA...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp CTTCCAGTCTTAAAAATACTCCAAGTAAGGCTCTTTAAGGCTTCTGGTAGGGACAGCTGTGGGGCCCTGTaGCCATGGTGGTACCTACAG +
Preference number: 5 (lower is better)
Translates to: LPVLKILQVRLFKASGRDSCGAL*PWWYLQ
Trigger: CTGTAGGTACCACCATGGCAACAGGGCCCCACAGCT...GTCCCTACCAGAAGCCTTAAAGAGCCTTACTTGGAGTATTTTTAAGACTGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp AGAGGGAACACAAGTGTTGAAACCAGGTCTGAAATCCAAGACCCAAGATGCTTTGTGAGGACTCCTGTCTaGGGATCACGAACGGTGGCT +
Preference number: 5 (lower is better)
Translates to: RGNTSVETRSEIQDPRCFVRTPV*GSRTVA
Trigger: AGCCACCGTTCGTGATCCCAAGACAGGAGTCCTCAC...AAAGCATCTTGGGTCTTGGATTTCAGACCTGGTTTCAACACTTGTGTTCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp GCTGAATGGAAGGGCTGGGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCTCCCACTCCATAATTaGCAACCTGTAACAATTCTG +
Preference number: 5 (lower is better)
Translates to: AEWKGWDFSHTGVALVWSLPLHN*QPVTIL
Trigger: CAGAATTGTTACAGGTTGCAAATTATGGAGTGGGAG...AGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCCCAGCCCTTCCATTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAACTCCCACTCCATAATTaGCAACCTGTAACAATTCTG +
Preference number: 5 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQLPLHN*QPVTIL
Trigger: CAGAATTGTTACAGGTTGCAAATTATGGAGTGGGAG...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGATCATGGAACCACTTATaGGAGACCCACTTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGSWNHL*ETHLQP
Trigger: GGGCTGCAAGTGGGTCTCCAATAAGTGGTTCCATGA...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAAGGTACAAAGGCACCTaGCTAGGCGCTAGACAGCTA +
Preference number: 5 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGRYKGT*LGARQL
Trigger: TAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTATTCCCCTCTGTTTaGAGGCCGCTGTCAAAAGGT +
Preference number: 5 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLLFPSV*RPLSKG
Trigger: ACCTTTTGACAGCGGCCTCAAAACAGAGGGGAATAG...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000428369.6
CDS-3UTR CAA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGAAGATGCTAGTAGGTTaGTTTCTGGTAAGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLKMLVG*FLVRAP
Trigger: GGGGGCCCTTACCAGAAACAAACCTACTAGCATCTT...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR CAA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCAAAGGCTTCCATTTTGTaGGCCCAGCTCTTAATCTTG +
Preference number: 5 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSKASIL*AQLLIL
Trigger: CAAGATTAAGAGCTGGGCCAACAAAATGGAAGCCTT...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CTAAAACACCTGAGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGGTCAAGGCTTCCATTTaGTTGGCCCAGCTCTTAATC +
Preference number: 5 (lower is better)
Translates to: LKHLRYKGTLLGARQLTLVKASI*LAQLLI
Trigger: GATTAAGAGCTGGGCCAACAAAATGGAAGCCTTGAC...CAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCTCAGGTGTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTGCACCTGTGACTTGGTaGTGGTGGCCTCCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCAPVTW*WWPPPR
Trigger: CCGGGGAGGAGGCCACCACAACCAAGTCACAGGTGC...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTATTTACCCCAGCTCGTTCGTGGCTaGGGTCAAGGGAGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: NHEHMCYVLWETKRNYLPQLVRG*GQGRAG
Trigger: GCCTGCTCTCCCTTGACCCAAGCCACGAACGAGCTG...GGGTAAATAGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCACAGCTCGTTCGTGGCTaGGGTCAAGGGAGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSQLVRG*GQGRAG
Trigger: GCCTGCTCTCCCTTGACCCAAGCCACGAACGAGCTG...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGCACTCGTCCTCCTCTTaGAAGGGGGCAATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRHSSSS*KGAMSS
Trigger: GCTGCTCATTGCCCCCTTCAAAGAGGAGGACGAGTG...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp AGGTACAAAGGCACCTTGCTAGGCGCTAGACAGCTAACTCTGCTGCAGCCACTTCTCCCACTCCATAATTaGCAACCTGTAACAATTCTG +
Preference number: 5 (lower is better)
Translates to: RYKGTLLGARQLTLLQPLLPLHN*QPVTIL
Trigger: CAGAATTGTTACAGGTTGCAAATTATGGAGTGGGAG...AAGTGGCTGCAGCAGAGTTAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CTTCCAGTCTTAAAAATACTCCAAGTAAGGCTCTTTAAGGCTTCTGGTAGGGACACTTTGATCCTAGCCTaGGGGCCAGGGATGGCACAG +
Preference number: 5 (lower is better)
Translates to: LPVLKILQVRLFKASGRDTLILA*GPGMAQ
Trigger: CTGTGCCATCCCTGGCCCCAAGGCTAGGATCAAAGT...GTCCCTACCAGAAGCCTTAAAGAGCCTTACTTGGAGTATTTTTAAGACTGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp TCAACTTCTGTTGATCCACAAGGTCTCAAGAACTCCTGTCCTCGTTCATGGAACAGGTACAAAGGCACCTaGCTAGGCGCTAGACAGCTA +
Preference number: 5 (lower is better)
Translates to: STSVDPQGLKNSCPRSWNRYKGT*LGARQL
Trigger: TAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT...GTTCCATGAACGAGGACAGGAGTTCTTGAGACCTTGTGGATCAACAGAAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS CCA 90 bp TTCCTCTTCCTCTTCTTCTTCTTTCCTCTTCCTCTTCTTCTTCTTTaGCTTGCGAGGCGCATTCCTGGGTCGTTTCTGTCCAATAAGGAG +
Preference number: 5 (lower is better)
Translates to: FLFLFFFFPLPLLLL*LARRIPGSFLSNKE
Trigger: CTCCTTATTGGACAGAAACGACCCAGGAATGCGCCTCGCAAGCCAAAGAAGAAGAAGAGGAAGAGGAAAGAAGAAGAAGAGGAAGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471826.1
CDS-3UTR CAA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGAGTCAAGGCTTCCATTTaGTTGGCCCAGCTCTTAATC +
Preference number: 5 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGVKASI*LAQLLI
Trigger: GATTAAGAGCTGGGCCAACAAAATGGAAGCCTTGAC...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGAGTCTCATCAGGGCTTaGGCAGCTCCTATCTCGTCC +
Preference number: 5 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRSLIRA*AAPISS
Trigger: GGACGAGATAGGAGCTGCCAAAGCCCTGATGAGACT...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTTCCAGCACCTGTGACTaGGTTGTGGTGGCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCSSTCD*VVVASS
Trigger: GGAGGAGGCCACCACAACCAAGTCACAGGTGCTGGA...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTATTTACCCAGCTGTGGGGCCCTGTaGCCATGGTGGTACCTACAG +
Preference number: 5 (lower is better)
Translates to: NHEHMCYVLWETKRNYLPSCGAL*PWWYLQ
Trigger: CTGTAGGTACCACCATGGCAACAGGGCCCCACAGCT...GGGTAAATAGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp AGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAAACATTCACTCCCACTCCATAATTaGCAACCTGTAACAATTCTG +
Preference number: 5 (lower is better)
Translates to: SHTGVALVWSPSAPDKHSLPLHN*QPVTIL
Trigger: CAGAATTGTTACAGGTTGCAAATTATGGAGTGGGAG...TGAATGTTTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp GGACTTCAGTCACACAGGAGTCGCCCTAGTATGGTCTCCCTCTGCTCCAGACAACCTAATATCATCACATaGGGGGTTAAGATTTCAACA +
Preference number: 5 (lower is better)
Translates to: GLQSHRSRPSMVSLCSRQPNIIT*GVKIST
Trigger: TGTTGAAATCTTAACCCCCAATGTGATGATATTAGG...TTGTCTGGAGCAGAGGGAGACCATACTAGGGCGACTCCTGTGTGACTGAAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS TCA 90 bp CACCAGCTTCTACATCACTCATCTGGAAATATAAGACATAGAGCTTaGCCCTCCTACCCAAGGCTCTCAGAGCAATTGAGCCACAAAGGA +
Preference number: 5 (lower is better)
Translates to: HQLLHHSSGNIRHRA*PSYPRLSEQLSHKG
Trigger: TCCTTTGTGGCTCAATTGCTCTGAGAGCCTTGGGTAGGAGGGTCAAGCTCTATGTCTTATATTTCCAGATGAGTGATGTAGAAGCTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467587.1
CDS TCA 90 bp ACATGTGCAGCTGGTCCCGTCTTCAGACTTTCTTGCCAAGACTCGTaGCCAATCTGTAAACAACCTACTGCTGCATTCTTCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TCAAGPVFRLSCQDS*PICKQPTAAFFFFF
Trigger: GAAGAAGAAGAAGAATGCAGCAGTAGGTTGTTTACAGATTGGTCACGAGTCTTGGCAAGAAAGTCTGAAGACGGGACCAGCTGCACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471826.1
CDS-3UTR CAA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGATTAATCTTGGAAAGCTaGGCTTCCTCCACAAGGATG +
Preference number: 5 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGLILES*ASSTRM
Trigger: CATCCTTGTGGAGGAAGCCAAGCTTTCCAAGATTAA...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCAGTTCCCCTCTGGAAATaGTGCCTGGGTCCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSVPLWK*CLGPAC
Trigger: ACAGGCTGGACCCAGGCACAATTTCCAGAGGGGAAC...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTGTTCCCCTCTGGAAATaGTGCCTGGGTCCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCVPLWK*CLGPAC
Trigger: ACAGGCTGGACCCAGGCACAATTTCCAGAGGGGAAC...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGAGCATTGCCTGGTACTaGGTTCCTGGAAGTTCCCCT +
Preference number: 5 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRSIAWY*VPGSSP
Trigger: AGGGGAACTTCCAGGAACCAAGTACCAGGCAATGCT...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGCATCCACACTCAGCATaGCCTGGTACTTGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRHPHSA*PGTWFL
Trigger: CAGGAACCAAGTACCAGGCAATGCTGAGTGTGGATG...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTCCAGCACCTGTGACTaGGTTGTGGTGGCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVSSTCD*VVVASS
Trigger: GGAGGAGGCCACCACAACCAAGTCACAGGTGCTGGA...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCAGCTGTGGGGCCCTGTaGCCATGGTGGTACCTACAG +
Preference number: 5 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVSCGAL*PWWYLQ
Trigger: CTGTAGGTACCACCATGGCAACAGGGCCCCACAGCT...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCACTCGTCCTCCTCTTaGAAGGGGGCAATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCHSSSS*KGAMSS
Trigger: GCTGCTCATTGCCCCCTTCAAAGAGGAGGACGAGTG...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTATTTACCCGGCAGGCAGCATGTCTaGTTCGGTAGTCACCTTCCC +
Preference number: 5 (lower is better)
Translates to: NHEHMCYVLWETKRNYLPGRQHV*FGSHLP
Trigger: GGGAAGGTGACTACCGAACAAGACATGCTGCCTGCC...GGGTAAATAGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCAGGCAGGCAGCATGTCTaGTTCGGTAGTCACCTTCCC +
Preference number: 5 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSGRQHV*FGSHLP
Trigger: GGGAAGGTGACTACCGAACAAGACATGCTGCCTGCC...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGTCATGGAACCACTTATaGGAGACCCACTTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRSWNHL*ETHLQP
Trigger: GGGCTGCAAGTGGGTCTCCAATAAGTGGTTCCATGA...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp CTTCCAGTCTTAAAAATACTCCAAGTAAGGCTCTTTAAGGCTTCTGGTAGGGACAAGGTGTCTGTCACGTaGACATGGGCTGAAGGACCA +
Preference number: 5 (lower is better)
Translates to: LPVLKILQVRLFKASGRDKVSVT*TWAEGP
Trigger: TGGTCCTTCAGCCCATGTCAACGTGACAGACACCTT...GTCCCTACCAGAAGCCTTAAAGAGCCTTACTTGGAGTATTTTTAAGACTGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCACGCTGCACAGAGAGGTaGGCGATAAAACCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSRCTER*AIKPAA
Trigger: AGCTGCAGGTTTTATCGCCAACCTCTCTGTGCAGCG...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp ACTCCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGTCCAGCACCTGTGACTaGGTTGTGGTGGCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TPGENVYNHLGIHYLVKLSSTCD*VVVASS
Trigger: GGAGGAGGCCACCACAACCAAGTCACAGGTGCTGGA...CAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR CAA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTTCCAGCACCTGTGACTaGGTTGTGGTGGCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LPVLWYSPTISINKTECTSSTCD*VVVASS
Trigger: GGAGGAGGCCACCACAACCAAGTCACAGGTGCTGGA...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp ACTCCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGCTACGGGGTGTCAGTTaGACACCCTCCCCACGACAG +
Preference number: 5 (lower is better)
Translates to: TPGENVYNHLGIHYLVKLLRGVS*TPSPRQ
Trigger: CTGTCGTGGGGAGGGTGTCAAACTGACACCCCGTAG...CAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR CAA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTAGCTGTGGGGCCCTGTaGCCATGGTGGTACCTACAG +
Preference number: 5 (lower is better)
Translates to: LPVLWYSPTISINKTECTSCGAL*PWWYLQ
Trigger: CTGTAGGTACCACCATGGCAACAGGGCCCCACAGCT...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp ACAAAGGAACATACAAAGGTGTCTGTCACGTTGACATGGGCTGAAGGACCAGGACTCCCACTCCATAATTaGCAACCTGTAACAATTCTG +
Preference number: 5 (lower is better)
Translates to: TKEHTKVSVTLTWAEGPGLPLHN*QPVTIL
Trigger: CAGAATTGTTACAGGTTGCAAATTATGGAGTGGGAG...TCCTGGTCCTTCAGCCCATGTCAACGTGACAGACACCTTTGTATGTTCCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCGGCAGGCAGCATGTCTaGTTCGGTAGTCACCTTCCC +
Preference number: 5 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVGRQHV*FGSHLP
Trigger: GGGAAGGTGACTACCGAACAAGACATGCTGCCTGCC...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTATTTACCCTTATTGGAGACCCACTaGCAGCCCACAAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: NHEHMCYVLWETKRNYLPLLETH*QPTSTG
Trigger: CCCTGTGCTTGTGGGCTGCAAGTGGGTCTCCAATAA...GGGTAAATAGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp TCAACTTCTGTTGATCCACAAGGTCTCAAGAACTCCTGTCCTCGTTCATGGAACGTCAGTCAACTTCTGTaGATCCACAAGGTCTCAAGA +
Preference number: 5 (lower is better)
Translates to: STSVDPQGLKNSCPRSWNVSQLL*IHKVSR
Trigger: TCTTGAGACCTTGTGGATCAACAGAAGTTGACTGAC...GTTCCATGAACGAGGACAGGAGTTCTTGAGACCTTGTGGATCAACAGAAGTTGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS-3UTR CAA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTACTTTGATCCTAGCCTaGGGGCCAGGGATGGCACAG +
Preference number: 5 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCTLILA*GPGMAQ
Trigger: CTGTGCCATCCCTGGCCCCAAGGCTAGGATCAAAGT...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTTCTGCTGCAGCCACTTaGATCCTAGCCTTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCSAAAT*ILALGP
Trigger: TGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGA...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AGAGGGAACACAAGTGTTGAAACCAGGTCTGAAATCCAAGACCCAAGATGCTTTTTAATCTTGGAAAGCTaGGCTTCCTCCACAAGGATG +
Preference number: 5 (lower is better)
Translates to: RGNTSVETRSEIQDPRCFLILES*ASSTRM
Trigger: CATCCTTGTGGAGGAAGCCAAGCTTTCCAAGATTAA...AAAGCATCTTGGGTCTTGGATTTCAGACCTGGTTTCAACACTTGTGTTCCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCAGTCTCATCAGGGCTTaGGCAGCTCCTATCTCGTCC +
Preference number: 5 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVSLIRA*AAPISS
Trigger: GGACGAGATAGGAGCTGCCAAAGCCCTGATGAGACT...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTATTTACCCAGCATTGCCTGGTACTaGGTTCCTGGAAGTTCCCCT +
Preference number: 5 (lower is better)
Translates to: NHEHMCYVLWETKRNYLPSIAWY*VPGSSP
Trigger: AGGGGAACTTCCAGGAACCAAGTACCAGGCAATGCT...GGGTAAATAGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCACATCCACACTCAGCATaGCCTGGTACTTGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSHPHSA*PGTWFL
Trigger: CAGGAACCAAGTACCAGGCAATGCTGAGTGTGGATG...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGGGTTTTGCGATCTCCTaGATCCTCTCGATTTCCTCA +
Preference number: 5 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRGFAIS*ILSISS
Trigger: TGAGGAAATCGAGAGGATCAAGGAGATCGCAAAACC...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp CTTCCAGTCTTAAAAATACTCCAAGTAAGGCTCTTTAAGGCTTCTGGTAGGGACCCCGTCCCTAAATGCTaGAAAGTATCTCGCTCATCA +
Preference number: 5 (lower is better)
Translates to: LPVLKILQVRLFKASGRDPVPKC*KVSRSS
Trigger: TGATGAGCGAGATACTTTCAAGCATTTAGGGACGGG...GTCCCTACCAGAAGCCTTAAAGAGCCTTACTTGGAGTATTTTTAAGACTGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCCCGCTCCGCAAGAGGTaGTACCAGAACACAGCTGTA +
Preference number: 5 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVPLRKR*YQNTAV
Trigger: TACAGCTGTGTTCTGGTACAACCTCTTGCGGAGCGG...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AGAGGGAACACAAGTGTTGAAACCAGGTCTGAAATCCAAGACCCAAGATGCTTTGTCAGTCAACTTCTGTaGATCCACAAGGTCTCAAGA +
Preference number: 5 (lower is better)
Translates to: RGNTSVETRSEIQDPRCFVSQLL*IHKVSR
Trigger: TCTTGAGACCTTGTGGATCAACAGAAGTTGACTGAC...AAAGCATCTTGGGTCTTGGATTTCAGACCTGGTTTCAACACTTGTGTTCCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTTCTGCTGCAGCCACTTaGATCCTAGCCTTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: LPVLWYSPTISINKTECTSAAAT*ILALGP
Trigger: TGGCCCCAAGGCTAGGATCAAAGTGGCTGCAGCAGA...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTAGGTACAAAGGCACCTaGCTAGGCGCTAGACAGCTA +
Preference number: 5 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCRYKGT*LGARQL
Trigger: TAGCTGTCTAGCGCCTAGCAAGGTGCCTTTGTACCT...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS CCA 90 bp ACTTCTGTTGATCCACAAGGTCTCAAGAACTCCTGTCCTCGTTCATaGAACCACTTATTGGAGACTGTGAAAAGAAAGCAAGCATGTTAC +
Preference number: 5 (lower is better)
Translates to: TSVDPQGLKNSCPRS*NHLLETVKRKQACY
Trigger: GTAACATGCTTGCTTTCTTTTCACAGTCTCCAATAAGTGGTTCCATGAACGAGGACAGGAGTTCTTGAGACCTTGTGGATCAACAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506807.1
CDS-3UTR CAA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTTGGGTTAGCAACTGCTaGCGGTTTCTGGCACACAGA +
Preference number: 5 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCWVSNC*RFLAHR
Trigger: TCTGTGTGCCAGAAACCGCAAGCAGTTGCTAACCCA...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CTTCCAGTCTTAAAAATACTCCAAGTAAGGCTCTTTAAGGCTTCTGGTAGGGACAAGGCTTCCATTTTGTaGGCCCAGCTCTTAATCTTG +
Preference number: 5 (lower is better)
Translates to: LPVLKILQVRLFKASGRDKASIL*AQLLIL
Trigger: CAAGATTAAGAGCTGGGCCAACAAAATGGAAGCCTT...GTCCCTACCAGAAGCCTTAAAGAGCCTTACTTGGAGTATTTTTAAGACTGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCAGCATCAGCAGCTGACTaGCTAGTCAAGGCTTCCATT +
Preference number: 5 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSASAAD*LVKASI
Trigger: AATGGAAGCCTTGACTAGCAAGTCAGCTGCTGATGC...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTAGTCTCATCAGGGCTTaGGCAGCTCCTATCTCGTCC +
Preference number: 5 (lower is better)
Translates to: LPVLWYSPTISINKTECTSLIRA*AAPISS
Trigger: GGACGAGATAGGAGCTGCCAAAGCCCTGATGAGACT...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCAGCATTGCCTGGTACTaGGTTCCTGGAAGTTCCCCT +
Preference number: 5 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVSIAWY*VPGSSP
Trigger: AGGGGAACTTCCAGGAACCAAGTACCAGGCAATGCT...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCCATCCACACTCAGCATaGCCTGGTACTTGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVHPHSA*PGTWFL
Trigger: CAGGAACCAAGTACCAGGCAATGCTGAGTGTGGATG...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTCCGCTCCGCAAGAGGTaGTACCAGAACACAGCTGTA +
Preference number: 5 (lower is better)
Translates to: LPVLWYSPTISINKTECTPLRKR*YQNTAV
Trigger: TACAGCTGTGTTCTGGTACAACCTCTTGCGGAGCGG...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp CTGCCTGTATTATGGTACAGTCCTACAATAAGCATTAACAAAACTGAATGTACTTTATTGGAGACCCACTaGCAGCCCACAAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: LPVLWYSPTISINKTECTLLETH*QPTSTG
Trigger: CCCTGTGCTTGTGGGCTGCAAGTGGGTCTCCAATAA...AGTACATTCAGTTTTGTTAATGCTTATTGTAGGACTGTACCATAATACAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTAAGGTGTCTGTCACGTaGACATGGGCTGAAGGACCA +
Preference number: 5 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCKVSVT*TWAEGP
Trigger: TGGTCCTTCAGCCCATGTCAACGTGACAGACACCTT...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCACTATTCCCCTCTGTTTaGAGGCCGCTGTCAAAAGGT +
Preference number: 5 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSLFPSV*RPLSKG
Trigger: ACCTTTTGACAGCGGCCTCAAAACAGAGGGGAATAG...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000428369.6
CDS-3UTR CAA 90 bp AGCATTACAATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTAAGATGCTAGTAGGTTaGTTTCTGGTAAGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: SITIMNTCAMFSGRQRETKMLVG*FLVRAP
Trigger: GGGGGCCCTTACCAGAAACAAACCTACTAGCATCTT...AGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATTGTAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS TCA 90 bp CTTCTTTTCACCCTATTGTCCTGGTTAGGACTTCCAGAGCAACACTaGACAACAGTAGTGAAGAGGACATTGGATTCTCCCATTAATAGA +
Preference number: 5 (lower is better)
Translates to: LLFTLLSWLGLPEQH*TTVVKRTLDSPINR
Trigger: TCTATTAATGGGAGAATCCAATGTCCTCTTCACTACTGTTGTTCAGTGTTGCTCTGGAAGTCCTAACCAGGACAATAGGGTGAAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471826.1
CDS-3UTR CAA 90 bp AGCATTACAATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTGTCAAGGCTTCCATTTaGTTGGCCCAGCTCTTAATC +
Preference number: 5 (lower is better)
Translates to: SITIMNTCAMFSGRQRETVKASI*LAQLLI
Trigger: GATTAAGAGCTGGGCCAACAAAATGGAAGCCTTGAC...AGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATTGTAATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCGCATCAGCAGCTGACTaGCTAGTCAAGGCTTCCATT +
Preference number: 5 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVASAAD*LVKASI
Trigger: AATGGAAGCCTTGACTAGCAAGTCAGCTGCTGATGC...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGGAACATCCACACTCAGCATaGCCTGGTACTTGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: PGENVYNHLGIHYLVKLEHPHSA*PGTWFL
Trigger: CAGGAACCAAGTACCAGGCAATGCTGAGTGTGGATG...TTCCAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR CAA 90 bp CTTCCAGTCTTAAAAATACTCCAAGTAAGGCTCTTTAAGGCTTCTGGTAGGGACCTCCCACTCCATAATTaGCAACCTGTAACAATTCTG +
Preference number: 5 (lower is better)
Translates to: LPVLKILQVRLFKASGRDLPLHN*QPVTIL
Trigger: CAGAATTGTTACAGGTTGCAAATTATGGAGTGGGAG...GTCCCTACCAGAAGCCTTAAAGAGCCTTACTTGGAGTATTTTTAAGACTGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCACCCGTCCCTAAATGCTaGAAAGTATCTCGCTCATCA +
Preference number: 5 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSPVPKC*KVSRSS
Trigger: TGATGAGCGAGATACTTTCAAGCATTTAGGGACGGG...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000166534.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp ACTCCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGTCATGGAACCACTTATaGGAGACCCACTTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: TPGENVYNHLGIHYLVKLSWNHL*ETHLQP
Trigger: GGGCTGCAAGTGGGTCTCCAATAAGTGGTTCCATGA...CAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR CAA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCCTATTCCCCTCTGTTTaGAGGCCGCTGTCAAAAGGT +
Preference number: 5 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVLFPSV*RPLSKG
Trigger: ACCTTTTGACAGCGGCCTCAAAACAGAGGGGAATAG...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000428369.6
CDS-3UTR CAA 90 bp AATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTATTTACCCTTTTCTAACTTGGTGTaGACACAGGTGCTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: NHEHMCYVLWETKRNYLPFSNLV*TQVLLL
Trigger: GAGCAGGAGCACCTGTGTCAACACCAAGTTAGAAAA...GGGTAAATAGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp TCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTCATTTTCTAACTTGGTGTaGACACAGGTGCTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: SKNQPDRNIQRNIQRCLSFSNLV*TQVLLL
Trigger: GAGCAGGAGCACCTGTGTCAACACCAAGTTAGAAAA...TGACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp AGCATTACAATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTTTAATCTTGGAAAGCTaGGCTTCCTCCACAAGGATG +
Preference number: 5 (lower is better)
Translates to: SITIMNTCAMFSGRQRETLILES*ASSTRM
Trigger: CATCCTTGTGGAGGAAGCCAAGCTTTCCAAGATTAA...AGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATTGTAATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTTTAATCTTGGAAAGCTaGGCTTCCTCCACAAGGATG +
Preference number: 5 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCLILES*ASSTRM
Trigger: CATCCTTGTGGAGGAAGCCAAGCTTTCCAAGATTAA...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTAAGGCTTCCATTTTGTaGGCCCAGCTCTTAATCTTG +
Preference number: 5 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCKASIL*AQLLIL
Trigger: CAAGATTAAGAGCTGGGCCAACAAAATGGAAGCCTT...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTGTCAAGGCTTCCATTTaGTTGGCCCAGCTCTTAATC +
Preference number: 5 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCVKASI*LAQLLI
Trigger: GATTAAGAGCTGGGCCAACAAAATGGAAGCCTTGAC...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGGAAGCATCAGCAGCTGACTaGCTAGTCAAGGCTTCCATT +
Preference number: 5 (lower is better)
Translates to: PGENVYNHLGIHYLVKLEASAAD*LVKASI
Trigger: AATGGAAGCCTTGACTAGCAAGTCAGCTGCTGATGC...TTCCAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR CAA 90 bp CATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTGGTTTTGCGATCTCCTaGATCCTCTCGATTTCCTCA +
Preference number: 5 (lower is better)
Translates to: HFSKNQPDRNIQRNIQRCGFAIS*ILSISS
Trigger: TGAGGAAATCGAGAGGATCAAGGAGATCGCAAAACC...ACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp TCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTGTGTCAGTCAACTTCTGTaGATCCACAAGGTCTCAAGA +
Preference number: 5 (lower is better)
Translates to: SPKISLIGTYKGTYKGVCVSQLL*IHKVSR
Trigger: TCTTGAGACCTTGTGGATCAACAGAAGTTGACTGAC...ACAGACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCTTAATCTTGGAAAGCTaGGCTTCCTCCACAAGGATG +
Preference number: 5 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVLILES*ASSTRM
Trigger: CATCCTTGTGGAGGAAGCCAAGCTTTCCAAGATTAA...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp AATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTATTTACCCCTCCCACTCCATAATTaGCAACCTGTAACAATTCTG +
Preference number: 5 (lower is better)
Translates to: NHEHMCYVLWETKRNYLPLPLHN*QPVTIL
Trigger: CAGAATTGTTACAGGTTGCAAATTATGGAGTGGGAG...GGGTAAATAGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCGTCAGTCAACTTCTGTaGATCCACAAGGTCTCAAGA +
Preference number: 5 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVVSQLL*IHKVSR
Trigger: TCTTGAGACCTTGTGGATCAACAGAAGTTGACTGAC...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000401867.5
ENST00000428369.6
CDS-3UTR CAA 90 bp CAGAACTTTGGTTCACTGAAACATCTCACACCTAAAACACCTGAGGTACAAAGGACCCAAGATGCTTTTTaGCTGCTAAAGCATTCATTA +
Preference number: 5 (lower is better)
Translates to: QNFGSLKHLTPKTPEVQRTQDAF*LLKHSL
Trigger: TAATGAATGCTTTAGCAGCAAAAAAGCATCTTGGGT...CCTTTGTACCTCAGGTGTTTTAGGTGTGAGATGTTTCAGTGAACCAAAGTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp ACTCCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGGTCAGTCAACTTCTGTaGATCCACAAGGTCTCAAGA +
Preference number: 5 (lower is better)
Translates to: TPGENVYNHLGIHYLVKLVSQLL*IHKVSR
Trigger: TCTTGAGACCTTGTGGATCAACAGAAGTTGACTGAC...CAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR CAA 90 bp AGCATTACAATCATGAACACATGTGCTATGTTCTCTGGGAGACAAAGAGAAACTAACATCCTCATGATCTaGGGGTATAGAAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: SITIMNTCAMFSGRQRETNILMI*GYRRIS
Trigger: AGAAATCCTTCTATACCCCAAGATCATGAGGATGTT...AGTTTCTCTTTGTCTCCCAGAGAACATAGCACATGTGTTCATGATTGTAATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR CAA 90 bp ATTTCTCCAAAAATCAGCCTGATAGGAACATACAAAGGAACATACAAAGGTGTCACCCAAGATGCTTTTTaGCTGCTAAAGCATTCATTA +
Preference number: 5 (lower is better)
Translates to: ISPKISLIGTYKGTYKGVTQDAF*LLKHSL
Trigger: TAATGAATGCTTTAGCAGCAAAAAAGCATCTTGGGT...GACACCTTTGTATGTTCCTTTGTATGTTCCTATCAGGCTGATTTTTGGAGAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360568.8
ENST00000379104.7
ENST00000401867.5
CDS-3UTR CAA 90 bp ACTCCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGAACATCCTCATGATCTaGGGGTATAGAAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: TPGENVYNHLGIHYLVKLNILMI*GYRRIS
Trigger: AGAAATCCTTCTATACCCCAAGATCATGAGGATGTT...CAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS-3UTR CAA 90 bp CCTGGTGAGAATGTGTATAACCACCTTGGAATACATTATTTAGTAAAGTTGGAACCTAATATCATCACATaGGGGGTTAAGATTTCAACA +
Preference number: 5 (lower is better)
Translates to: PGENVYNHLGIHYLVKLEPNIIT*GVKIST
Trigger: TGTTGAAATCTTAACCCCCAATGTGATGATATTAGG...TTCCAACTTTACTAAATAATGTATTCCAAGGTGGTTATACACATTCTCACCAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360568.8
ENST00000379104.7
CDS GCA 72 bp GCCAAGTTCCCAGCCCCGCCCGACAGCCGAGGGAACTaGACGAAGGGCGCCGCTGACCTCACCACCCTGAGC +
Preference number: 6 (lower is better)
Translates to: AKFPAPPDSRGN*TKGAADLTTLS
Trigger: GCTCAGGGTGGTGAGGTCAGCGGCGCCCTTCGTGCAGTTCCCTCGGCTGTCGGGCGGGGCTGGGAACTTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428369.6
CDS GCA 72 bp GTCTCCGCAGCTCACCACCCTGAGCTCGGGAAGGCTTaGGGGCGGCGGCACAAGAACCCAGACGGGTGCAGA +
Preference number: 6 (lower is better)
Translates to: VSAAHHPELGKA*GRRHKNPDGCR
Trigger: TCTGCACCCGTCTGGGTTCTTGTGCCGCCGCCCGCAAGCCTTCCCGAGCTCAGGGTGGTGAGCTGCGGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417528.5
CDS GCA 72 bp CCTCCTCCGGGAAGTCCTCTGGCCGGAGGCAGTCAGTaGTCTACCAAGTACCCACTGCCCGCATTCCCTTCC +
Preference number: 6 (lower is better)
Translates to: PPPGSPLAGGSQ*STKYPLPAFPS
Trigger: GGAAGGGAATGCGGGCAGTGGGTACTTGGTAGAGCACTGACTGCCTCCGGCCAGAGGACTTCCCGGAGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379100.7
ENST00000401867.5
ENST00000453286.5
CDS GCA 72 bp TGGCCGGAGGCAGTCAGTGCTCTACCAAGTACCCACTaGCCGCATTCCCTTCCAGCACAGCGCTCACCACAC +
Preference number: 6 (lower is better)
Translates to: WPEAVSALPSTH*PHSLPAQRSPH
Trigger: GTGTGGTGAGCGCTGTGCTGGAAGGGAATGCGGGCAGTGGGTACTTGGTAGAGCACTGACTGCCTCCGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379100.7
ENST00000401867.5
ENST00000453286.5
CDS TCA 72 bp TCACAGAGGGAAGTGTCTGGGCTGTCCAGCAATACCTaGGGCAGGAAGTGCCCTGATCCAGGCTCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SQREVSGLSSNT*GRKCPDPGSCC
Trigger: GCAGCAGGAGCCTGGATCAGGGCACTTCCTGCCTCAGGTATTGCTGGACAGCCCAGACACTTCCCTCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS GCA 72 bp ACAGAGAGGTTGGCGATAAAACCTGCAGCTGAGTCCTaGAGGACAAGGTCCTCCAGCGCAGGCCAGTCTGTG +
Preference number: 6 (lower is better)
Translates to: TERLAIKPAAES*RTRSSSAGQSV
Trigger: CACAGACTGGCCTGCGCTGGAGGACCTTGTCCTGCAGGACTCAGCTGCAGGTTTTATCGCCAACCTCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000395164.5
ENST00000401867.5
ENST00000417528.5
ENST00000428369.6
ENST00000431054.5
ENST00000439698.5
ENST00000453286.5
CDS CCA 72 bp CAGGACCTTCCCGCTCTTCCAATCCGCCTGTCCCACTaGGTTAGCAACTGCTTGCGGTTTCTGGCACACAGA +
Preference number: 6 (lower is better)
Translates to: QDLPALPIRLSH*VSNCLRFLAHR
Trigger: TCTGTGTGCCAGAAACCGCAAGCAGTTGCTAACCCAGTGGGACAGGCGGATTGGAAGAGCGGGAAGGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000417528.5
ENST00000418055.5
ENST00000428369.6
ENST00000428841.1
ENST00000453286.5
ENST00000478055.1
CDS CCA 72 bp TCAGGGCTTTGGCAGCTCCTATCTCGTCCTCATCAGTaGGGAAGAACTGCCGCTGCACAGAGAGGTTGGCGA +
Preference number: 6 (lower is better)
Translates to: SGLWQLLSRPHQ*GRTAAAQRGWR
Trigger: TCGCCAACCTCTCTGTGCAGCGGCAGTTCTTCCCCACTGATGAGGACGAGATAGGAGCTGCCAAAGCCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000395164.5
ENST00000401867.5
ENST00000417528.5
ENST00000428369.6
ENST00000431054.5
ENST00000439698.5
ENST00000453286.5
CDS CCA 72 bp TCACGGGTCTCCGCAGCTGCCAAGGAAAAACAACGCTaGTTCCACAAGGATGTCTGGACACTCGCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: SRVSAAAKEKQR*FHKDVWTLAAP
Trigger: GGGAGCTGCGAGTGTCCAGACATCCTTGTGGAACCAGCGTTGTTTTTCCTTGGCAGCTGCGGAGACCCGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379086.5
ENST00000379100.7
CDS GCA 72 bp GCTCTTCCAATCCGCCTGTCCCACTGGGTTAGCAACTaGTTGCGGTTTCTGGCACACAGAAGGGTCCCGTTT +
Preference number: 6 (lower is better)
Translates to: ALPIRLSHWVSN*LRFLAHRRVPF
Trigger: AAACGGGACCCTTCTGTGTGCCAGAAACCGCAAGCAGTTGCTAACCCAGTGGGACAGGCGGATTGGAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000417528.5
ENST00000418055.5
ENST00000428369.6
ENST00000428841.1
ENST00000453286.5
ENST00000478055.1
CDS GCA 72 bp TGCTCCCACTCACATAGGCTGTTCCTCTGTCCACGATaGCCTTTTGCCAGCCTTCCTCTGACCACTCCAGCT +
Preference number: 6 (lower is better)
Translates to: CSHSHRLFLCPR*PFASLPLTTPA
Trigger: AGCTGGAGTGGTCAGAGGAAGGCTGGCAAAAGGGCATCGTGGACAGAGGAACAGCCTATGTGAGTGGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS GCA 72 bp TTCCAATCCGCCTGTCCCACTGGGTTAGCAACTGCTTaGGGTTTCTGGCACACAGAAGGGTCCCGTTTGTTG +
Preference number: 6 (lower is better)
Translates to: FQSACPTGLATA*GFWHTEGSRLL
Trigger: CAACAAACGGGACCCTTCTGTGTGCCAGAAACCGCAAGCAGTTGCTAACCCAGTGGGACAGGCGGATTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000417528.5
ENST00000418055.5
ENST00000428369.6
ENST00000428841.1
ENST00000453286.5
ENST00000478055.1
CDS GCA 72 bp GCAGCTCCTATCTCGTCCTCATCAGTGGGGAAGAACTaGCGCTGCACAGAGAGGTTGGCGATAAAACCTGCA +
Preference number: 6 (lower is better)
Translates to: AAPISSSSVGKN*RCTERLAIKPA
Trigger: TGCAGGTTTTATCGCCAACCTCTCTGTGCAGCGGCAGTTCTTCCCCACTGATGAGGACGAGATAGGAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000395164.5
ENST00000401867.5
ENST00000417528.5
ENST00000428369.6
ENST00000431054.5
ENST00000439698.5
ENST00000453286.5
CDS GCA 72 bp GCTCCTGCTGCGAAGGTCAACTGGGCATCTTACACATaGAGGGCACAGTACCAGGCACGTTATCTCACTCCA +
Preference number: 6 (lower is better)
Translates to: APAAKVNWASYT*RAQYQARYLTP
Trigger: TGGAGTGAGATAACGTGCCTGGTACTGTGCCCTGCATGTGTAAGATGCCCAGTTGACCTTCGCAGCAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS GCA 72 bp CAGAGGGAAGTGTATAGGCTGTTCCTCTGTCCACGATaGCCTTTTGCCAGCCTTCCTCTGACCACTCCAGCT +
Preference number: 6 (lower is better)
Translates to: QREVYRLFLCPR*PFASLPLTTPA
Trigger: AGCTGGAGTGGTCAGAGGAAGGCTGGCAAAAGGGCATCGTGGACAGAGGAACAGCCTATACACTTCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453286.5
CDS CAA 72 bp CTTCCAATCCGCCTGTCCCACTGGGTTAGCAACTGCTaGCGGTTTCTGGCACACAGAAGGGTCCCGTTTGTT +
Preference number: 6 (lower is better)
Translates to: LPIRLSHWVSNC*RFLAHRRVPFV
Trigger: AACAAACGGGACCCTTCTGTGTGCCAGAAACCGCAAGCAGTTGCTAACCCAGTGGGACAGGCGGATTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000417528.5
ENST00000418055.5
ENST00000428369.6
ENST00000428841.1
ENST00000453286.5
ENST00000478055.1
CDS TCA 72 bp CTGGAAATTGTGCCTGGGTCCAGCCTGTATGTGTCCTaGAGTCTCATCAGGGCTTTGGCAGCTCCTATCTCG +
Preference number: 6 (lower is better)
Translates to: LEIVPGSSLYVS*SLIRALAAPIS
Trigger: CGAGATAGGAGCTGCCAAAGCCCTGATGAGACTTCAGGACACATACAGGCTGGACCCAGGCACAATTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000395164.5
ENST00000401867.5
ENST00000417528.5
ENST00000428369.6
ENST00000431054.5
ENST00000439698.5
ENST00000453286.5
CDS CCA 72 bp CCAGCCTGTATGTGTCCTGAAGTCTCATCAGGGCTTTaGCAGCTCCTATCTCGTCCTCATCAGTGGGGAAGA +
Preference number: 6 (lower is better)
Translates to: PACMCPEVSSGL*QLLSRPHQWGR
Trigger: TCTTCCCCACTGATGAGGACGAGATAGGAGCTGCCAAAGCCCTGATGAGACTTCAGGACACATACAGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000395164.5
ENST00000401867.5
ENST00000417528.5
ENST00000428369.6
ENST00000431054.5
ENST00000439698.5
ENST00000453286.5
CDS CCA 72 bp CGTTATCTCACTCCAGGGTCTTGTAGACAGCGTCCGTaGACAGCTATCCCCTACAGTGTTCCTTCCCCATCA +
Preference number: 6 (lower is better)
Translates to: RYLTPGSCRQRP*TAIPYSVPSPS
Trigger: TGATGGGGAAGGAACACTGTAGGGGATAGCTGTCCACGGACGCTGTCTACAAGACCCTGGAGTGAGATAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS CAA 72 bp CCTGGTACTTGGTTCCTGGAAGTTCCCCTCTGGAAATaGTGCCTGGGTCCAGCCTGTATGTGTCCTGAAGTC +
Preference number: 6 (lower is better)
Translates to: PGTWFLEVPLWK*CLGPACMCPEV
Trigger: GACTTCAGGACACATACAGGCTGGACCCAGGCACAATTTCCAGAGGGGAACTTCCAGGAACCAAGTACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000395164.5
ENST00000401867.5
ENST00000417528.5
ENST00000428369.6
ENST00000431054.5
ENST00000439698.5
CDS CAA 72 bp GGCTCTGGAACACCATGGTTCTCTGAGGGAGAATGCTaGTGCACCCTCTCTGGGCCAACAATGCTTCATGCT +
Preference number: 6 (lower is better)
Translates to: GSGTPWFSEGEC*CTLSGPTMLHA
Trigger: AGCATGAAGCATTGTTGGCCCAGAGAGGGTGCACAAGCATTCTCCCTCAGAGAACCATGGTGTTCCAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471826.1
CDS CAA 90 bp CTTCCCGCTCTTCCAATCCGCCTGTCCCACTGGGTTAGCAACTGCTaGCGGTTTCTGGCACACAGAAGGGTCCCGTTTGTTGAATTAGTT +
Preference number: 6 (lower is better)
Translates to: LPALPIRLSHWVSNC*RFLAHRRVPFVELV
Trigger: AACTAATTCAACAAACGGGACCCTTCTGTGTGCCAGAAACCGCAAGCAGTTGCTAACCCAGTGGGACAGGCGGATTGGAAGAGCGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000166534.8
ENST00000379086.5
ENST00000379100.7
ENST00000401867.5
ENST00000417528.5
ENST00000418055.5
ENST00000428369.6
ENST00000428841.1
ENST00000453286.5
ENST00000478055.1
CDS TCA 72 bp TTGTGCACCCTCTCTGGGCCAACAATGCTTCATGCTTaGATGCCCAATGTCACAGCTCTCCGCAGTCAGCTT +
Preference number: 6 (lower is better)
Translates to: LCTLSGPTMLHA*MPNVTALRSQL
Trigger: AAGCTGACTGCGGAGAGCTGTGACATTGGGCATTCAAGCATGAAGCATTGTTGGCCCAGAGAGGGTGCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471826.1
CDS TCA 72 bp TTAGCCCATGTACTTAGCTCCTCTCAAGCACTGGCATaGAGTAACCAGGCCAGCCCCACATCACCCTCTCAA +
Preference number: 6 (lower is better)
Translates to: LAHVLSSSQALA*SNQASPTSPSQ
Trigger: TTGAGAGGGTGATGTGGGGCTGGCCTGGTTACTTCATGCCAGTGCTTGAGAGGAGCTAAGTACATGGGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478055.1
CDS GCA 72 bp GGTACTTGGTTCCTGGAAGTTCCCCTCTGGAAATTGTaGCTGGGTCCAGCCTGTATGTGTCCTGAAGTCTCA +
Preference number: 6 (lower is better)
Translates to: GTWFLEVPLWKL*LGPACMCPEVS
Trigger: TGAGACTTCAGGACACATACAGGCTGGACCCAGGCACAATTTCCAGAGGGGAACTTCCAGGAACCAAGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000395164.5
ENST00000401867.5
ENST00000417528.5
ENST00000428369.6
ENST00000431054.5
ENST00000439698.5
CDS GCA 72 bp TACAAGGCCATAAGGAATGGCATTGGCCAAGGTCTCTaGTCCCACTCACATAGGCTGTTCCTCTGTCCACGA +
Preference number: 6 (lower is better)
Translates to: YKAIRNGIGQGL*SHSHRLFLCPR
Trigger: TCGTGGACAGAGGAACAGCCTATGTGAGTGGGAGCAGAGACCTTGGCCAATGCCATTCCTTATGGCCTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379100.7
ENST00000401867.5
CDS GCA 72 bp AGGGAGAATGCTTGTGCACCCTCTCTGGGCCAACAATaGTTCATGCTTGAATGCCCAATGTCACAGCTCTCC +
Preference number: 6 (lower is better)
Translates to: RENACAPSLGQQ*FMLECPMSQLS
Trigger: GGAGAGCTGTGACATTGGGCATTCAAGCATGAAGCATTGTTGGCCCAGAGAGGGTGCACAAGCATTCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471826.1
CDS GCA 72 bp TCTGGCTCTGGAACACCATGGTTCTCTGAGGGAGAATaGTTGTGCACCCTCTCTGGGCCAACAATGCTTCAT +
Preference number: 6 (lower is better)
Translates to: SGSGTPWFSEGE*LCTLSGPTMLH
Trigger: ATGAAGCATTGTTGGCCCAGAGAGGGTGCACAAGCATTCTCCCTCAGAGAACCATGGTGTTCCAGAGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471826.1
CDS CCA 72 bp CTTGGTTCCTGGAAGTTCCCCTCTGGAAATTGTGCCTaGGTCCAGCCTGTATGTGTCCTGAAGTCTCATCAG +
Preference number: 6 (lower is better)
Translates to: LGSWKFPSGNCA*VQPVCVLKSHQ
Trigger: CTGATGAGACTTCAGGACACATACAGGCTGGACCCAGGCACAATTTCCAGAGGGGAACTTCCAGGAACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000395164.5
ENST00000401867.5
ENST00000417528.5
ENST00000428369.6
ENST00000431054.5
ENST00000439698.5
CDS CCA 72 bp ACCCTCTCAAAGGTTTCCTCTTATAGGCACCCTGGATaGCTTCCTTGTTCCTTGAGGGGCAGAAGGGAAGGA +
Preference number: 6 (lower is better)
Translates to: TLSKVSSYRHPG*LPCSLRGRREG
Trigger: TCCTTCCCTTCTGCCCCTCAAGGAACAAGGAAGCCATCCAGGGTGCCTATAAGAGGAAACCTTTGAGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478055.1
CDS CAA 90 bp CCCTCAGCATCAGCAGCTGACTTGCTAGTCAAGGCTTCCATTTTGTaGGCCCAGCTGTGGAACCAGAGGAAAAGGAAGACTAATGCGTCC +
Preference number: 6 (lower is better)
Translates to: PSASAADLLVKASIL*AQLWNQRKRKTNAS
Trigger: GGACGCATTAGTCTTCCTTTTCCTCTGGTTCCACAGCTGGGCCAACAAAATGGAAGCCTTGACTAGCAAGTCAGCTGCTGATGCTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478055.1
CDS TCA 72 bp CAGACACCCAGAGTTTCATGGTCACAGAGGGAAGTGTaGACAGAAGTGATGTCTCGAGTGGCTGCAAGACTG +
Preference number: 6 (lower is better)
Translates to: QTPRVSWSQREV*TEVMSRVAARL
Trigger: CAGTCTTGCAGCCACTCGAGACATCACTTCTGTTCACACTTCCCTCTGTGACCATGAAACTCTGGGTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416053.5
ENST00000439698.5
CDS TCA 72 bp GACAAGGTATATAGATTGCCCTCCTCTCAGCATGAGTaGCACTACTTGGTGTCTGCTCCATGGCCAGCCCTT +
Preference number: 6 (lower is better)
Translates to: DKVYRLPSSQHE*HYLVSAPWPAL
Trigger: AAGGGCTGGCCATGGAGCAGACACCAAGTAGTGTCACTCATGCTGAGAGGAGGGCAATCTATATACCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467587.1
CDS TCA 72 bp TCTGTTGGCATTAATCCATTGGGGGCAGAGCCCTCATaGCCTTATCACCTCGTAAGAGCCCACCTCTCAACA +
Preference number: 6 (lower is better)
Translates to: SVGINPLGAEPS*PYHLVRAHLST
Trigger: TGTTGAGAGGTGGGCTCTTACGAGGTGATAAGGTCATGAGGGCTCTGCCCCCAATGGATTAATGCCAACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471826.1
CDS CCA 72 bp ATAGATTGCCCTCCTCTCAGCATGAGTGACACTACTTaGTGTCTGCTCCATGGCCAGCCCTTTAGCCAAGAA +
Preference number: 6 (lower is better)
Translates to: IDCPPLSMSDTT*CLLHGQPFSQE
Trigger: TTCTTGGCTAAAGGGCTGGCCATGGAGCAGACACCAAGTAGTGTCACTCATGCTGAGAGGAGGGCAATCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467587.1
CDS CAA 90 bp CCTCCTTCACAAGGACACATTCCCACAATAACAAACCCACCTCTGTaGGCATTAATCCATTGGGGGCAGAGCCCTCATGACCTTATCACC +
Preference number: 6 (lower is better)
Translates to: PPSQGHIPTITNPPL*ALIHWGQSPHDLIT
Trigger: GGTGATAAGGTCATGAGGGCTCTGCCCCCAATGGATTAATGCCAACAGAGGTGGGTTTGTTATTGTGGGAATGTGTCCTTGTGAAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471826.1
CDS CCA 72 bp CTCTTCTTCTTCTTTCCTCTTCCTCTTCTTCTTCTTTaGCTTGCGAGGCGCATTCCTGGGTCGTTTCTGTCC +
Preference number: 6 (lower is better)
Translates to: LFFFFPLPLLLL*LARRIPGSFLS
Trigger: GGACAGAAACGACCCAGGAATGCGCCTCGCAAGCCAAAGAAGAAGAAGAGGAAGAGGAAAGAAGAAGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471826.1
CDS CCA 72 bp TTGCTAGTCAAGGCTTCCATTTTGTTGGCCCAGCTGTaGAACCAGAGGAAAAGGAAGACTAATGCGTCCACC +
Preference number: 6 (lower is better)
Translates to: LLVKASILLAQL*NQRKRKTNAST
Trigger: GGTGGACGCATTAGTCTTCCTTTTCCTCTGGTTCCACAGCTGGGCCAACAAAATGGAAGCCTTGACTAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478055.1
CDS CAA 72 bp CCTCTTCTTCTTCTTTCCTCTTCCTCTTCTTCTTCTTaGGCTTGCGAGGCGCATTCCTGGGTCGTTTCTGTC +
Preference number: 6 (lower is better)
Translates to: PLLLLSSSSSSS*ACEAHSWVVSV
Trigger: GACAGAAACGACCCAGGAATGCGCCTCGCAAGCCAAAGAAGAAGAAGAGGAAGAGGAAAGAAGAAGAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471826.1
CDS CAA 72 bp CAAGGACACATTCCCACAATAACAAACCCACCTCTGTaGGCATTAATCCATTGGGGGCAGAGCCCTCATGAC +
Preference number: 6 (lower is better)
Translates to: QGHIPTITNPPL*ALIHWGQSPHD
Trigger: GTCATGAGGGCTCTGCCCCCAATGGATTAATGCCAACAGAGGTGGGTTTGTTATTGTGGGAATGTGTCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471826.1
CDS CAA 90 bp CTAAGGATGGTTGGGGACTTAGGACACCTCTTAATCTTGGAAAGCTaGGCTTCCTCCACAAGGATGTACTCTTTCAGAGACTGCACCAGC +
Preference number: 6 (lower is better)
Translates to: LRMVGDLGHLLILES*ASSTRMYSFRDCTS
Trigger: GCTGGTGCAGTCTCTGAAAGAGTACATCCTTGTGGAGGAAGCCAAGCTTTCCAAGATTAAGAGGTGTCCTAAGTCCCCAACCATCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478055.1
CDS TCA 72 bp GCTGGTCCCGTCTTCAGACTTTCTTGCCAAGACTCGTaGCCAATCTGTAAACAACCTACTGCTGCATTCTTC +
Preference number: 6 (lower is better)
Translates to: AGPVFRLSCQDS*PICKQPTAAFF
Trigger: GAAGAATGCAGCAGTAGGTTGTTTACAGATTGGTCACGAGTCTTGGCAAGAAAGTCTGAAGACGGGACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471826.1
CDS CCA 72 bp CTCCGCAAGAGGTTGTACCAGAACACAGCTGTACCCTaGGAAAGAGATGGCCTTTCAGAACACATTCTTAAG +
Preference number: 6 (lower is better)
Translates to: LRKRLYQNTAVP*ERDGLSEHILK
Trigger: CTTAAGAATGTGTTCTGAAAGGCCATCTCTTTCCCAGGGTACAGCTGTGTTCTGGTACAACCTCTTGCGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474628.1
CDS CAA 90 bp GAAGGCCAACTAAGGATGGTTGGGGACTTAGGACACCTCTTAATCTaGGAAAGCTTGGCTTCCTCCACAAGGATGTACTCTTTCAGAGAC +
Preference number: 6 (lower is better)
Translates to: EGQLRMVGDLGHLLI*ESLASSTRMYSFRD
Trigger: GTCTCTGAAAGAGTACATCCTTGTGGAGGAAGCCAAGCTTTCCAAGATTAAGAGGTGTCCTAAGTCCCCAACCATCCTTAGTTGGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478055.1
CDS TCA 72 bp ACCCTATTGTCCTGGTTAGGACTTCCAGAGCAACACTaGACAACAGTAGTGAAGAGGACATTGGATTCTCCC +
Preference number: 6 (lower is better)
Translates to: TLLSWLGLPEQH*TTVVKRTLDSP
Trigger: GGGAGAATCCAATGTCCTCTTCACTACTGTTGTTCAGTGTTGCTCTGGAAGTCCTAACCAGGACAATAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471826.1
CDS CAA 72 bp GTTGGGGACTTAGGACACCTCTTAATCTTGGAAAGCTaGGCTTCCTCCACAAGGATGTACTCTTTCAGAGAC +
Preference number: 6 (lower is better)
Translates to: VGDLGHLLILES*ASSTRMYSFRD
Trigger: GTCTCTGAAAGAGTACATCCTTGTGGAGGAAGCCAAGCTTTCCAAGATTAAGAGGTGTCCTAAGTCCCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478055.1
CDS CAA 72 bp CTAAGGATGGTTGGGGACTTAGGACACCTCTTAATCTaGGAAAGCTTGGCTTCCTCCACAAGGATGTACTCT +
Preference number: 6 (lower is better)
Translates to: LRMVGDLGHLLI*ESLASSTRMYS
Trigger: AGAGTACATCCTTGTGGAGGAAGCCAAGCTTTCCAAGATTAAGAGGTGTCCTAAGTCCCCAACCATCCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478055.1
CDS TCA 72 bp GCTGGTCCCGTCTTCAGACTTTCTTGCCAAGACTCGTaGCCACTGGAGAGGTTAAATAAGCATCTTTATGAA +
Preference number: 6 (lower is better)
Translates to: AGPVFRLSCQDS*PLERLNKHLYE
Trigger: TTCATAAAGATGCTTATTTAACCTCTCCAGTGGTCACGAGTCTTGGCAAGAAAGTCTGAAGACGGGACCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416053.5
CDS CAA 72 bp TCCATTTTGTTGGCCCAGCTCTTAATCTTGGAAAGCTaGGCTTCCTCCACAAGGATGTACTCTTTCAGAGAC +
Preference number: 6 (lower is better)
Translates to: SILLAQLLILES*ASSTRMYSFRD
Trigger: GTCTCTGAAAGAGTACATCCTTGTGGAGGAAGCCAAGCTTTCCAAGATTAAGAGCTGGGCCAACAAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000166534.8
ENST00000360568.8
ENST00000379086.5
ENST00000379100.7
ENST00000379104.7
ENST00000395164.5
ENST00000401867.5
ENST00000416053.5
ENST00000417528.5
ENST00000418055.5
ENST00000428369.6
ENST00000431054.5
ENST00000439698.5
ENST00000453286.5
CDS CAA 72 bp AAGAAAGTAGCCACACGATTCCCCGTCCCTAAATGCTaGAAAGTATCTCGCTCATCATTCCTAGAGAAGTCG +
Preference number: 6 (lower is better)
Translates to: KKVATRFPVPKC*KVSRSSFLEKS
Trigger: CGACTTCTCTAGGAATGATGAGCGAGATACTTTCAAGCATTTAGGGACGGGGAATCGTGTGGCTACTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000166534.8
ENST00000379104.7
ENST00000401867.5
CDS CCA 72 bp GATCCACAAGGTCTCAAGAACTCCTGTCCTCGTTCATaGAACCACTTATTGGAGACTGTGAAAAGAAAGCAA +
Preference number: 6 (lower is better)
Translates to: DPQGLKNSCPRS*NHLLETVKRKQ
Trigger: TTGCTTTCTTTTCACAGTCTCCAATAAGTGGTTCCATGAACGAGGACAGGAGTTCTTGAGACCTTGTGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506807.1
CDS GCA 72 bp TTTAAGAAAGTAGCCACACGATTCCCCGTCCCTAAATaGTTGAAAGTATCTCGCTCATCATTCCTAGAGAAG +
Preference number: 6 (lower is better)
Translates to: FKKVATRFPVPK*LKVSRSSFLEK
Trigger: CTTCTCTAGGAATGATGAGCGAGATACTTTCAAGCATTTAGGGACGGGGAATCGTGTGGCTACTTTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000166534.8
ENST00000379104.7
ENST00000401867.5
CDS GCA 72 bp TCAAAATTCTGGAAGCTGAGAAGTCCAATATCAAGGTaGCAGCATCTTTCAAGGGCCTTCTTGCTGCATTAT +
Preference number: 6 (lower is better)
Translates to: SKFWKLRSPISR*QHLSRAFLLHY
Trigger: ATAATGCAGCAAGAAGGCCCTTGAAAGATGCTGGCACCTTGATATTGGACTTCTCAGCTTCCAGAATTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471826.1
CDS CAA 72 bp CCTTATCACCTCGTAAGAGCCCACCTCTCAACACTGTaGCATTGTAGATTAAGTTTCCAACACATGAACTCT +
Preference number: 6 (lower is better)
Translates to: PYHLVRAHLSTL*HCRLSFQHMNS
Trigger: AGAGTTCATGTGTTGGAAACTTAATCTACAATGCAACAGTGTTGAGAGGTGGGCTCTTACGAGGTGATAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471826.1
CDS TCA 72 bp GTGTTTCAATATATTATGGGAGCCAATTTGCTATATTaGCAATTTACAGGGGGCCACCATTTTCTTAAAGGG +
Preference number: 6 (lower is better)
Translates to: VFQYIMGANLLY*QFTGGHHFLKG
Trigger: CCCTTTAAGAAAATGGTGGCCCCCTGTAAATTGTCAATATAGCAAATTGGCTCCCATAATATATTGAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471826.1