RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for P3H3 (Homo sapiens)

Ensembl gene IDs: ENSG00000110811

Ensembl transcript IDs: ENST00000290510.10, ENST00000536140.5, ENST00000538102.5, ENST00000540406.5, ENST00000541956.5, ENST00000542976.2, ENST00000544200.5, ENST00000544813.5, ENST00000544949.5, ENST00000545596.1, ENST00000612048.4

Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTGTGCACTGTCCTCTGAGTCCAGGCCCTTGTAGGTCCCCAAGATaGTGGGGGTGCAGGGACAGAGAGCTTGCTGTTCTGCTCCTGATG +
Preference number: 1 (lower is better)
Translates to: PVHCPLSPGPCRSPR*WGCRDRELAVLLLM
Trigger: CATCAGGAGCAGAACAGCAAGCTCTCTGTCCCTGCACCCCCACCATCTTGGGGACCTACAAGGGCCTGGACTCAGAGGACAGTGCACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290510.10
3UTR TCA 90 bp CAAGATGGTGGGGGTGCAGGGACAGAGAGCTTGCTGTTCTGCTCCTaGTGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGATGGC +
Preference number: 1 (lower is better)
Translates to: QDGGGAGTESLLFCS*CHTGASCVSWHQDG
Trigger: GCCATCTTGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGCAGAACAGCAAGCTCTCTGTCCCTGCACCCCCACCATCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290510.10
3UTR CCA 90 bp CTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGATaGCCTTCCACAAGTCAAGTGGCCACATCCTCAAGGAGCTGGCTC +
Preference number: 1 (lower is better)
Translates to: LLMSHRGFLCVLASR*PSTSQVATSSRSWL
Trigger: GAGCCAGCTCCTTGAGGATGTGGCCACTTGACTTGTGGAAGGCCATCTTGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
3UTR-3UTR CCA 90 bp TGCACAGACTGGGAGAGAGGAGCAGGGTTATACCTCCCAACCCCACCATCCTCTGCTTCCTGTGTGTCCTaGCATCAAGATGGCCTTCCA +
Preference number: 2 (lower is better)
Translates to: CTDWERGAGLYLPTPPSSASCVS*HQDGLP
Trigger: TGGAAGGCCATCTTGATGCCAGGACACACAGGAAGC...AGAGGATGGTGGGGTTGGGAGGTATAACCCTGCTCCTCTCTCCCAGTCTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
3UTR-3UTR CCA 90 bp TGCACAGACTGGGAGAGAGGAGCAGGGTTATACCTCCCAACCCCACCATCCTCTCTTCCACAAGTCAAGTaGCCACATCCTCAAGGAGCT +
Preference number: 2 (lower is better)
Translates to: CTDWERGAGLYLPTPPSSLPQVK*PHPQGA
Trigger: AGCTCCTTGAGGATGTGGCCACTTGACTTGTGGAAG...AGAGGATGGTGGGGTTGGGAGGTATAACCCTGCTCCTCTCTCCCAGTCTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
3UTR TCA 72 bp GGGGGTGCAGGGACAGAGAGCTTGCTGTTCTGCTCCTaGTGTCACACAGGGGCTTCCTGTGTGTCCTGGCAT +
Preference number: 3 (lower is better)
Translates to: GGAGTESLLFCS*CHTGASCVSWH
Trigger: ATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGCAGAACAGCAAGCTCTCTGTCCCTGCACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290510.10
3UTR CCA 72 bp TCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGATaGCCTTCCACAAGTCAAGTGGCCACATCCTCAAGG +
Preference number: 3 (lower is better)
Translates to: SHRGFLCVLASR*PSTSQVATSSR
Trigger: CCTTGAGGATGTGGCCACTTGACTTGTGGAAGGCCATCTTGATGCCAGGACACACAGGAAGCCCCTGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp GGGAGGCACAGTGTTCCCCATCTGTCCAGGGCTGCAGGTCCGGCAGCGGGGCCCGGGGCCCAGCCTCCGTaGTGCGCACTGGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GRHSVPHLSRAAGPAAGPGAQPP*CALGQA
Trigger: TGCCTGACCCAGTGCGCAGCACGGAGGCTGGGCCCC...GGGCCCCGCTGCCGGACCTGCAGCCCTGGACAGATGGGGAACACTGTGCCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR TCA 90 bp GGGAGGCACAGTGTTCCCCATCTGTCCAGGGCTGCAGGTCCGGCAGCGGGGCCCCCAGGGATCGGAGGATaGAGCGCTGGATGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GRHSVPHLSRAAGPAAGPPGIGG*SAGCPL
Trigger: GAGAGGACATCCAGCGCTTCATCCTCCGATCCCTGG...GGGCCCCGCTGCCGGACCTGCAGCCCTGGACAGATGGGGAACACTGTGCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp CAGGGAGGCACAGTGTTCCCCATCTGTCCAGGGCTGCAGGTCCGGCAGCGGGGCGGCTCCAGCCCCAGCTaGATCCTTAGCCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QGGTVFPICPGLQVRQRGGSSPS*ILSQLQ
Trigger: CTGCAGCTGGCTAAGGATGCAGCTGGGGCTGGAGCC...GCCCCGCTGCCGGACCTGCAGCCCTGGACAGATGGGGAACACTGTGCCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp GGGAGGCACAGTGTTCCCCATCTGTCCAGGGCTGCAGGTCCGGCAGCGGGGCCCCTTGCTCTCCTTCTATaGCGCTGCGGCACACCAGGT +
Preference number: 4 (lower is better)
Translates to: GRHSVPHLSRAAGPAAGPLALLL*RCGTPG
Trigger: ACCTGGTGTGCCGCAGCGCCATAGAAGGAGAGCAAG...GGGCCCCGCTGCCGGACCTGCAGCCCTGGACAGATGGGGAACACTGTGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp GGGAGGCACAGTGTTCCCCATCTGTCCAGGGCTGCAGGTCCGGCAGCGGGGCCCGTTGTCTGCGTGCACTaGGTGACTCAGGTCCATGCG +
Preference number: 4 (lower is better)
Translates to: GRHSVPHLSRAAGPAAGPVVCVH*VTQVHA
Trigger: CGCATGGACCTGAGTCACCCAGTGCACGCAGACAAC...GGGCCCCGCTGCCGGACCTGCAGCCCTGGACAGATGGGGAACACTGTGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp GGGAGGCACAGTGTTCCCCATCTGTCCAGGGCTGCAGGTCCGGCAGCGGGGCCCTGTAGGTCCCCAAGATaGTGGGGGTGCAGGGACAGA +
Preference number: 4 (lower is better)
Translates to: GRHSVPHLSRAAGPAAGPCRSPR*WGCRDR
Trigger: TCTGTCCCTGCACCCCCACCATCTTGGGGACCTACA...GGGCCCCGCTGCCGGACCTGCAGCCCTGGACAGATGGGGAACACTGTGCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp CCTCCCCTGCCATTTCTGTTCAGGGAGGCACAGTGTTCCCCATCTGTCCAGGGCTGCGCGGCGGAGCGCTaGACGGAGAAGCTGTCGCTC +
Preference number: 4 (lower is better)
Translates to: PPLPFLFREAQCSPSVQGCAAER*TEKLSL
Trigger: GAGCGACAGCTTCTCCGTGCAGCGCTCCGCCGCGCA...GCCCTGGACAGATGGGGAACACTGTGCCTCCCTGAACAGAAATGGCAGGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp CCTCCCCTGCCATTTCTGTTCAGGGAGGCACAGTGTTCCCCATCTGTCCAGGGCCTCCGTGCTGCGCACTaGGTCAGGCAGTCTGCGCGG +
Preference number: 4 (lower is better)
Translates to: PPLPFLFREAQCSPSVQGLRAAH*VRQSAR
Trigger: CCGCGCAGACTGCCTGACCCAGTGCGCAGCACGGAG...GCCCTGGACAGATGGGGAACACTGTGCCTCCCTGAACAGAAATGGCAGGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp TCAGGGAGGCACAGTGTTCCCCATCTGTCCAGGGCTGCAGGTCCGGCAGCGGGGAGCTGGGCCTGGTACTaGTTCAGAGCCCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: SGRHSVPHLSRAAGPAAGSWAWY*FRALLA
Trigger: TGCCAAGAGGGCTCTGAACCAGTACCAGGCCCAGCT...CCCCGCTGCCGGACCTGCAGCCCTGGACAGATGGGGAACACTGTGCCTCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp CTCCCCTGCCATTTCTGTTCAGGGAGGCACAGTGTTCCCCATCTGTCCAGGGCTCCACGTGTGCCACAGTaGCAGGGCACAGCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LPCHFCSGRHSVPHLSRAPRVPQ*QGTAPS
Trigger: GGACGGCGCTGTGCCCTGGCACTGTGGCACACGTGG...AGCCCTGGACAGATGGGGAACACTGTGCCTCCCTGAACAGAAATGGCAGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR TCA 90 bp AGCCTCCTCCCCTGCCATTTCTGTTCAGGGAGGCACAGTGTTCCCCATCTGTCCGGGCGTTGGGCTCCGTaGAGAACAGGTCCCCACCCT +
Preference number: 4 (lower is better)
Translates to: SLLPCHFCSGRHSVPHLSGRWAP*RTGPHP
Trigger: AGGGTGGGGACCTGTTCTTCACGGAGCCCAACGCCC...GGACAGATGGGGAACACTGTGCCTCCCTGAACAGAAATGGCAGGGGAGGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp GTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGATGGCCTTCCACAAGTCACCATCTGTCCAGGGCTaGAGGTCCGGCAGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: VTQGLPVCPGIKMAFHKSPSVQG*RSGSGA
Trigger: GGCCCCGCTGCCGGACCTGCAGCCCTGGACAGATGG...TGACTTGTGGAAGGCCATCTTGATGCCAGGACACACAGGAAGCCCCTGTGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp GCACAGACTGGGAGAGAGGAGCAGGGTTATACCTCCCAACCCCACCATCCTCTTGCCAGTCCTGCCTCCTaGCGCCCCAGTAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AQTGREEQGYTSQPHHPLASPAS*RPSSSR
Trigger: CCTGGAGCTACTGGGGCGCCAGGAGGCAGGACTGGC...AAGAGGATGGTGGGGTTGGGAGGTATAACCCTGCTCCTCTCTCCCAGTCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp CCTCCCCTGCCATTTCTGTTCAGGGAGGCACAGTGTTCCCCATCTGTCCAGGGCCACCCCACACTCGGCTaGGGTGAGCAGCCCATCCAA +
Preference number: 4 (lower is better)
Translates to: PPLPFLFREAQCSPSVQGHPTLG*GEQPIQ
Trigger: TTGGATGGGCTGCTCACCCCAGCCGAGTGTGGGGTG...GCCCTGGACAGATGGGGAACACTGTGCCTCCCTGAACAGAAATGGCAGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR TCA 90 bp TCAGCCTCCTCCCCTGCCATTTCTGTTCAGGGAGGCACAGTGTTCCCCATCTGTCACACTCGGCTGGGGTaGGCAGCCCATCCAACACCG +
Preference number: 4 (lower is better)
Translates to: SASSPAISVQGGTVFPICHTRLG*AAHPTP
Trigger: CGGTGTTGGATGGGCTGCTCACCCCAGCCGAGTGTG...ACAGATGGGGAACACTGTGCCTCCCTGAACAGAAATGGCAGGGGAGGAGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp TTCCTGTGTGTCCTGGCATCAAGATGGCCTTCCACAAGTCAAGTGGCCACATCCCTGGGTCAGGCAGTCTaGGCGGCGGAGCGCTGCACG +
Preference number: 4 (lower is better)
Translates to: FLCVLASRWPSTSQVATSLGQAV*AAERCT
Trigger: CGTGCAGCGCTCCGCCGCGCAGACTGCCTGACCCAG...GGATGTGGCCACTTGACTTGTGGAAGGCCATCTTGATGCCAGGACACACAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp AGCCTCCTCCCCTGCCATTTCTGTTCAGGGAGGCACAGTGTTCCCCATCTGTCCGAGCCTCCTCTAGCCTaGGCAGTGCCAGTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SLLPCHFCSGRHSVPHLSEPPLA*AVPVLP
Trigger: AGGCAGGACTGGCACTGCCCAGGCTAGAGGAGGCTC...GGACAGATGGGGAACACTGTGCCTCCCTGAACAGAAATGGCAGGGGAGGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp CCTCCCCTGCCATTTCTGTTCAGGGAGGCACAGTGTTCCCCATCTGTCCAGGGCCGGAGGATGAAGCGCTaGATGTCCTCTCTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: PPLPFLFREAQCSPSVQGRRMKR*MSSLGP
Trigger: CGGACCCAGAGAGGACATCCAGCGCTTCATCCTCCG...GCCCTGGACAGATGGGGAACACTGTGCCTCCCTGAACAGAAATGGCAGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR TCA 90 bp GTTCTGCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGATGGGGCACACCAGGTGGGTaGAGGACAGATGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: VLLLMSHRGFLCVLASRWGTPGG*RTDAGA
Trigger: GGCCCCTGCATCTGTCCTTCACCCACCTGGTGTGCC...CCATCTTGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGCAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR TCA 90 bp GCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGATGGCCTTCTCTGCGTGCACTGGGTaGCTCAGGTCCATGCGCTGC +
Preference number: 4 (lower is better)
Translates to: APDVTQGLPVCPGIKMAFSACTG*LRSMRC
Trigger: GCAGCGCATGGACCTGAGTCACCCAGTGCACGCAGA...GAAGGCCATCTTGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp TCCTGTGTGTCCTGGCATCAAGATGGCCTTCCACAAGTCAAGTGGCCACATCCTGCCCAGCCTCCGTGCTaGGCACTGGGTCAGGCAGTC +
Preference number: 4 (lower is better)
Translates to: SCVSWHQDGLPQVKWPHPAQPPC*ALGQAV
Trigger: GACTGCCTGACCCAGTGCGCAGCACGGAGGCTGGGC...AGGATGTGGCCACTTGACTTGTGGAAGGCCATCTTGATGCCAGGACACACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp AGCCTCCTCCCCTGCCATTTCTGTTCAGGGAGGCACAGTGTTCCCCATCTGTCCGCATCCTTAGCCAGCTaGAGCAGCACCCCACACTCG +
Preference number: 4 (lower is better)
Translates to: SLLPCHFCSGRHSVPHLSASLAS*SSTPHS
Trigger: CGAGTGTGGGGTGCTGCTGCAGCTGGCTAAGGATGC...GGACAGATGGGGAACACTGTGCCTCCCTGAACAGAAATGGCAGGGGAGGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp AGCCTCCTCCCCTGCCATTTCTGTTCAGGGAGGCACAGTGTTCCCCATCTGTCCAGGTCCCGGAAGCTCTaGGGCCGAACTCCCGACATT +
Preference number: 4 (lower is better)
Translates to: SLLPCHFCSGRHSVPHLSRSRKL*GRTPDI
Trigger: AATGTCGGGAGTTCGGCCCCAGAGCTTCCGGGACCT...GGACAGATGGGGAACACTGTGCCTCCCTGAACAGAAATGGCAGGGGAGGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp GCACAGACTGGGAGAGAGGAGCAGGGTTATACCTCCCAACCCCACCATCCTCTTGCTGGATGTCCTCTCTaGGTCCGAGGCCAGGTCTCG +
Preference number: 4 (lower is better)
Translates to: AQTGREEQGYTSQPHHPLAGCPL*VRGQVS
Trigger: CGAGACCTGGCCTCGGACCCAGAGAGGACATCCAGC...AAGAGGATGGTGGGGTTGGGAGGTATAACCCTGCTCCTCTCTCCCAGTCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR TCA 90 bp TTATTGCACAGACTGGGAGAGAGGAGCAGGGTTATACCTCCCAACCCCACCATCTCTCGACACCGGAGCTaGAGGCCACAAGGCGCCCAC +
Preference number: 4 (lower is better)
Translates to: LLHRLGERSRVIPPNPTISRHRS*RPQGAH
Trigger: GTGGGCGCCTTGTGGCCTTCAGCTCCGGTGTCGAGA...GATGGTGGGGTTGGGAGGTATAACCCTGCTCCTCTCTCCCAGTCTGTGCAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp GCACAGACTGGGAGAGAGGAGCAGGGTTATACCTCCCAACCCCACCATCCTCTTTCTTCTTCAGCCCCCTaGTGCTCCTCAGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: AQTGREEQGYTSQPHHPLSSSAP*CSSGPS
Trigger: TGAGGGGCCTGAGGAGCAGCAGGGGGCTGAAGAAGA...AAGAGGATGGTGGGGTTGGGAGGTATAACCCTGCTCCTCTCTCCCAGTCTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp GTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGATGGCCTTCCACAAGTCATGGGTGAAGGACAGATaGAGGGGCCGTTCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: VTQGLPVCPGIKMAFHKSWVKDR*RGRSGE
Trigger: CTCCCCGGAACGGCCCCTGCATCTGTCCTTCACCCA...TGACTTGTGGAAGGCCATCTTGATGCCAGGACACACAGGAAGCCCCTGTGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp CTTGCTGTTCTGCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCACTCCCTGTGCTCAGGTaGCCACGTGTGCCACAGTGC +
Preference number: 4 (lower is better)
Translates to: LAVLLLMSHRGFLCVLASLPVLR*PRVPQC
Trigger: GCACTGTGGCACACGTGGGCACCTGAGCACAGGGAG...TGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGCAGAACAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp TGCACAGACTGGGAGAGAGGAGCAGGGTTATACCTCCCAACCCCACCATCCTCTCTGCGGCACACCAGGTaGGTGAAGGACAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: CTDWERGAGLYLPTPPSSLRHTR*VKDRCR
Trigger: CCTGCATCTGTCCTTCACCCACCTGGTGTGCCGCAG...AGAGGATGGTGGGGTTGGGAGGTATAACCCTGCTCCTCTCTCCCAGTCTGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp TGTCCTGGCATCAAGATGGCCTTCCACAAGTCAAGTGGCCACATCCTCAAGGAGCCGATAGGTGTAGGCTaGGGGCTCCCGCCAGCACTC +
Preference number: 4 (lower is better)
Translates to: CPGIKMAFHKSSGHILKEPIGVG*GLPPAL
Trigger: GAGTGCTGGCGGGAGCCCCCAGCCTACACCTATCGG...CTCCTTGAGGATGTGGCCACTTGACTTGTGGAAGGCCATCTTGATGCCAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp CTCCCAACCCCACCATCCTCTTCATTTAAAGCATCAGCCTCCTCCCCTGCCATTGCGGCTAGGGGGCTCTaGGGAAGGGTCTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LPTPPSSSFKASASSPAIAARGL*GRVFAG
Trigger: CCCAGCAAAGACCCTTCCCCAGAGCCCCCTAGCCGC...AATGGCAGGGGAGGAGGCTGATGCTTTAAATGAAGAGGATGGTGGGGTTGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp AAGATGGCCTTCCACAAGTCAAGTGGCCACATCCTCAAGGAGCTGGCTCAGCCATTGTCTTGGACCCTCTaGTGCCTGCGGCTAGGGGGC +
Preference number: 4 (lower is better)
Translates to: KMAFHKSSGHILKELAQPLSWTL*CLRLGG
Trigger: GCCCCCTAGCCGCAGGCACCAGAGGGTCCAAGACAA...TGGCTGAGCCAGCTCCTTGAGGATGTGGCCACTTGACTTGTGGAAGGCCATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp GCACAGACTGGGAGAGAGGAGCAGGGTTATACCTCCCAACCCCACCATCCTCTTAGGTCCCCAAGATGGTaGGGGTGCAGGGACAGAGAG +
Preference number: 4 (lower is better)
Translates to: AQTGREEQGYTSQPHHPLRSPRW*GCRDRE
Trigger: CTCTCTGTCCCTGCACCCCCACCATCTTGGGGACCT...AAGAGGATGGTGGGGTTGGGAGGTATAACCCTGCTCCTCTCTCCCAGTCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR TCA 90 bp ACAGACTGGGAGAGAGGAGCAGGGTTATACCTCCCAACCCCACCATCCTCTTCAAGGGGTCAGGATCCTTaGAGCTGGTCCCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: TDWERGAGLYLPTPPSSSRGQDP*SWSPGA
Trigger: AGCACCTGGGGACCAGCTTCAAGGATCCTGACCCCT...TGAAGAGGATGGTGGGGTTGGGAGGTATAACCCTGCTCCTCTCTCCCAGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp CTCCCAACCCCACCATCCTCTTCATTTAAAGCATCAGCCTCCTCCCCTGCCATTTCAGGTGCCCACGTGTaGCACAGTGCCAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: LPTPPSSSFKASASSPAISGAHV*HSARAQ
Trigger: CTGTGCCCTGGCACTGTGGCACACGTGGGCACCTGA...AATGGCAGGGGAGGAGGCTGATGCTTTAAATGAAGAGGATGGTGGGGTTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp TGTTCTGCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGATGCACTCCTGCTCCCTGTaGTCAGGTGCCCACGTGTGC +
Preference number: 4 (lower is better)
Translates to: CSAPDVTQGLPVCPGIKMHSCSL*SGAHVC
Trigger: GCACACGTGGGCACCTGAGCACAGGGAGCAGGAGTG...CATCTTGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGCAGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp TCCTGTGTGTCCTGGCATCAAGATGGCCTTCCACAAGTCAAGTGGCCACATCCTTCTTGGACCCTCTGGTaGCTGCGGCTAGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SCVSWHQDGLPQVKWPHPSWTLW*LRLGGS
Trigger: AGAGCCCCCTAGCCGCAGGCACCAGAGGGTCCAAGA...AGGATGTGGCCACTTGACTTGTGGAAGGCCATCTTGATGCCAGGACACACAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp AGAGCTTGCTGTTCTGCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCCTCCCGAACCCGAGGTaGCCTTCCAGTCTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: RACCSAPDVTQGLPVCPGLPNPR*PSSLVL
Trigger: CAAGACAAGACTGGAAGGGCACCTCGGGTTCGGGAG...GCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGCAGAACAGCAAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp GTTCTGCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGATGGGCCGCCTCAGCTGGTTaGGAAGGAAGTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: VLLLMSHRGFLCVLASRWAASAG*EGSLGQ
Trigger: CTGTCCCAGACTTCCTTCCCAACCAGCTGAGGCGGC...CCATCTTGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp GTTCTGCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGATGGTCTCCCAGCTGGGCCTaGTACTGGTTCAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: VLLLMSHRGFLCVLASRWSPSWA*YWFRAL
Trigger: GAGGGCTCTGAACCAGTACCAGGCCCAGCTGGGAGA...CCATCTTGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp TCCTGTGTGTCCTGGCATCAAGATGGCCTTCCACAAGTCAAGTGGCCACATCCTACGGCCCACACCCCATaGGGATTCTCGACACCGGAG +
Preference number: 4 (lower is better)
Translates to: SCVSWHQDGLPQVKWPHPTAHTP*GFSTPE
Trigger: CTCCGGTGTCGAGAATCCCCATGGGGTGTGGGCCGT...AGGATGTGGCCACTTGACTTGTGGAAGGCCATCTTGATGCCAGGACACACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp AGAGCTTGCTGTTCTGCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCCTTCCAGTCTTGTCTTaGACCCTCTGGTGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: RACCSAPDVTQGLPVCPGLPVLS*TLWCLR
Trigger: CCGCAGGCACCAGAGGGTCCAAGACAAGACTGGAAG...GCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGCAGAACAGCAAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR TCA 90 bp GTTCTGCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGATGGGACAGATTGCCCACCTaGGCATGGGCCTCATGTAGC +
Preference number: 4 (lower is better)
Translates to: VLLLMSHRGFLCVLASRWDRLPT*AWASCS
Trigger: GCTACATGAGGCCCATGCTCAGGTGGGCAATCTGTC...CCATCTTGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR TCA 90 bp TCAGCCTCCTCCCCTGCCATTTCTGTTCAGGGAGGCACAGTGTTCCCCATCTGTCCTGGAAGTCATCGTTaGGGTAGAGGAGTCCGCTGT +
Preference number: 4 (lower is better)
Translates to: SASSPAISVQGGTVFPICPGSHR*GRGVRC
Trigger: ACAGCGGACTCCTCTACCTCAACGATGACTTCCAGG...ACAGATGGGGAACACTGTGCCTCCCTGAACAGAAATGGCAGGGGAGGAGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR TCA 90 bp TGCTGTTCTGCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGCTGTGCACTGTCCTCTaGGTCCAGGCCCTTGTAGGT +
Preference number: 4 (lower is better)
Translates to: CCSAPDVTQGLPVCPGIKLCTVL*VQALVG
Trigger: ACCTACAAGGGCCTGGACTCAGAGGACAGTGCACAG...CTTGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGCAGAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp TCAGCCTCCTCCCCTGCCATTTCTGTTCAGGGAGGCACAGTGTTCCCCATCTGTATCAGCCTCCTCCCCTaGCATTTCTGTTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SASSPAISVQGGTVFPICISLLP*HFCSGR
Trigger: CCTCCCTGAACAGAAATGGCAGGGGAGGAGGCTGAT...ACAGATGGGGAACACTGTGCCTCCCTGAACAGAAATGGCAGGGGAGGAGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp CCTCCCCTGCCATTTCTGTTCAGGGAGGCACAGTGTTCCCCATCTGTCCAGGGCGCATCTGCAGGTGCATaGGGTTTGCTACAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: PPLPFLFREAQCSPSVQGASAGA*GLLQRR
Trigger: CCTTCTTTGTAGCAAACCCCATGCACCTGCAGATGC...GCCCTGGACAGATGGGGAACACTGTGCCTCCCTGAACAGAAATGGCAGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp CCAACCCCACCATCCTCTTCATTTAAAGCATCAGCCTCCTCCCCTGCCATTTCTTGCGACCAGGGCGTGTaGCTGTTTCCCCCACACAGC +
Preference number: 4 (lower is better)
Translates to: PTPPSSSFKASASSPAISCDQGV*LFPPHS
Trigger: GCTGTGTGGGGGAAACAGCCACACGCCCTGGTCGCA...AGAAATGGCAGGGGAGGAGGCTGATGCTTTAAATGAAGAGGATGGTGGGGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp CTCCCAACCCCACCATCCTCTTCATTTAAAGCATCAGCCTCCTCCCCTGCCATTCTCGGCTCTCCCAGCTaGGCCTGGTACTGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: LPTPPSSSFKASASSPAILGSPS*AWYWFR
Trigger: TCTGAACCAGTACCAGGCCCAGCTGGGAGAGCCGAG...AATGGCAGGGGAGGAGGCTGATGCTTTAAATGAAGAGGATGGTGGGGTTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp CCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGATGGCCTTCCACTCCCCAGGTGCTCCATaGCATAGTAGAGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PDVTQGLPVCPGIKMAFHSPGAP*HSRAAS
Trigger: AGAGGCAGCTCTACTATGCCATGGAGCACCTGGGGA...GTGGAAGGCCATCTTGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp ACAGACTGGGAGAGAGGAGCAGGGTTATACCTCCCAACCCCACCATCCTCTTCAGGCTTCACGGGCTCATaGTCCCAAGGCCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TDWERGAGLYLPTPPSSSGFTGS*SQGLFS
Trigger: AGAGAAGAGGCCTTGGGACCATGAGCCCGTGAAGCC...TGAAGAGGATGGTGGGGTTGGGAGGTATAACCCTGCTCCTCTCTCCCAGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp TCCTGTGTGTCCTGGCATCAAGATGGCCTTCCACAAGTCAAGTGGCCACATCCTCACGATAGCCAGACCTaGCTCCAGCCCCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SCVSWHQDGLPQVKWPHPHDSQT*LQPQLH
Trigger: ATGCAGCTGGGGCTGGAGCCAGGTCTGGCTATCGTG...AGGATGTGGCCACTTGACTTGTGGAAGGCCATCTTGATGCCAGGACACACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR TCA 90 bp CTTGCTGTTCTGCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCATTGCTGTTCTGCTCCTaGTGTCACACAGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LAVLLLMSHRGFLCVLASLLFCS*CHTGAS
Trigger: GGAAGCCCCTGTGTGACATCAGGAGCAGAACAGCAA...TGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGCAGAACAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp GTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGATGGCCTTCCACAAGTCATCCGACCCATTCAGCTaGCTGGAATCCTGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: VTQGLPVCPGIKMAFHKSSDPFS*LESWVK
Trigger: CTTGACCCAGGATTCCAGGCAGCTGAATGGGTCGGA...TGACTTGTGGAAGGCCATCTTGATGCCAGGACACACAGGAAGCCCCTGTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp CTTGCTGTTCTGCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCATCCATGCGCTGCTCTTaGTCTCCTTCTATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: LAVLLLMSHRGFLCVLASSMRCS*SPSMAL
Trigger: CAGCGCCATAGAAGGAGAGCAAGAGCAGCGCATGGA...TGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGCAGAACAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp CTCCCAACCCCACCATCCTCTTCATTTAAAGCATCAGCCTCCTCCCCTGCCATTCAGGACGCAGTTGTCTaGGTGCACTGGGTGACTCAG +
Preference number: 4 (lower is better)
Translates to: LPTPPSSSFKASASSPAIQDAVV*VHWVTQ
Trigger: CTGAGTCACCCAGTGCACGCAGACAACTGCGTCCTG...AATGGCAGGGGAGGAGGCTGATGCTTTAAATGAAGAGGATGGTGGGGTTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp TTCCTGTGTGTCCTGGCATCAAGATGGCCTTCCACAAGTCAAGTGGCCACATCCTGTAGCCGCCTCAGCTaGTTGGGAAGGAAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: FLCVLASRWPSTSQVATSCSRLS*LGRKSG
Trigger: CCCAGACTTCCTTCCCAACCAGCTGAGGCGGCTACA...GGATGTGGCCACTTGACTTGTGGAAGGCCATCTTGATGCCAGGACACACAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp GTTCTGCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGATGGGTAGGTCAAGGGCTTTaGCTTCACGGGCTCATGGTC +
Preference number: 4 (lower is better)
Translates to: VLLLMSHRGFLCVLASRWVGQGL*LHGLMV
Trigger: GACCATGAGCCCGTGAAGCCAAAGCCCTTGACCTAC...CCATCTTGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGCAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp GTGTCCTGGCATCAAGATGGCCTTCCACAAGTCAAGTGGCCACATCCTCAAGGAAGCTGCCTGGAATCCTaGGTCAAGGTCACACCCTCC +
Preference number: 4 (lower is better)
Translates to: VSWHQDGLPQVKWPHPQGSCLES*VKVTPS
Trigger: GGAGGGTGTGACCTTGACCCAGGATTCCAGGCAGCT...TCCTTGAGGATGTGGCCACTTGACTTGTGGAAGGCCATCTTGATGCCAGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp AGAGCTTGCTGTTCTGCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCACCCATTCAGCTGCCTaGAATCCTGGGTCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: RACCSAPDVTQGLPVCPGTHSAA*NPGSRS
Trigger: TGACCTTGACCCAGGATTCCAGGCAGCTGAATGGGT...GCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGCAGAACAGCAAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp GCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGATGGCCTTCGCTTCCTGTGTGTCCTaGCATCAAGATGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: APDVTQGLPVCPGIKMAFASCVS*HQDGLP
Trigger: TGGAAGGCCATCTTGATGCCAGGACACACAGGAAGC...GAAGGCCATCTTGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR TCA 90 bp CCAACCCCACCATCCTCTTCATTTAAAGCATCAGCCTCCTCCCCTGCCATTTCTCGGCACTGCAGGACCTaGATCCAGTGTCCTGCAATG +
Preference number: 4 (lower is better)
Translates to: PTPPSSSFKASASSPAISRHCRT*IQCPAM
Trigger: CATTGCAGGACACTGGATTCAGGTCCTGCAGTGCCG...AGAAATGGCAGGGGAGGAGGCTGATGCTTTAAATGAAGAGGATGGTGGGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR TCA 90 bp CTTGCTGTTCTGCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCATTCCTCCTCCTCCTGTaGCTCCTGCAGCAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: LAVLLLMSHRGFLCVLASFLLLL*LLQQFF
Trigger: AAAGAACTGCTGCAGGAGTCACAGGAGGAGGAGGAA...TGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGCAGAACAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp AGAGCTTGCTGTTCTGCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCGAGCTTTTCTCTAAGTaGCTCAGGGATGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RACCSAPDVTQGLPVCPGELFSK*LRDESC
Trigger: GCAGCTCTCATCCCTGAGGCACTTAGAGAAAAGCTC...GCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGCAGAACAGCAAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp CCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGATGGCCTTCCACCTGGGGAAGGGTCTTTaGTGGGCATTTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: PDVTQGLPVCPGIKMAFHLGKGL*WAFLPL
Trigger: AAGAGGAAGAAATGCCCAGCAAAGACCCTTCCCCAG...GTGGAAGGCCATCTTGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp CCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGATGGCCTTCCACGGGAAGGGTCTTTGCTaGGCATTTCTTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PDVTQGLPVCPGIKMAFHGKGLC*AFLPLP
Trigger: AGGAAGAGGAAGAAATGCCCAGCAAAGACCCTTCCC...GTGGAAGGCCATCTTGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp GCACAGACTGGGAGAGAGGAGCAGGGTTATACCTCCCAACCCCACCATCCTCTTCTTCCACAAGTCAAGTaGCCACATCCTCAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: AQTGREEQGYTSQPHHPLLPQVK*PHPQGA
Trigger: AGCTCCTTGAGGATGTGGCCACTTGACTTGTGGAAG...AAGAGGATGGTGGGGTTGGGAGGTATAACCCTGCTCCTCTCTCCCAGTCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CCA 90 bp AGAGCTTGCTGTTCTGCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCGTCCTGGCATCAAGATaGCCTTCCACAAGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: RACCSAPDVTQGLPVCPGVLASR*PSTSQV
Trigger: CACTTGACTTGTGGAAGGCCATCTTGATGCCAGGAC...GCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGCAGAACAGCAAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp GTGTCCTGGCATCAAGATGGCCTTCCACAAGTCAAGTGGCCACATCCTCAAGGACTCAGGTCCATGCGCTaGTCTTGCTCTCCTTCTATG +
Preference number: 4 (lower is better)
Translates to: VSWHQDGLPQVKWPHPQGLRSMR*SCSPSM
Trigger: CATAGAAGGAGAGCAAGAGCAGCGCATGGACCTGAG...TCCTTGAGGATGTGGCCACTTGACTTGTGGAAGGCCATCTTGATGCCAGGACAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR GCA 90 bp ACAGACTGGGAGAGAGGAGCAGGGTTATACCTCCCAACCCCACCATCCTCTTCATCCTCCTGTGACTCCTaGAGCAGTTCTTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TDWERGAGLYLPTPPSSSSSCDS*SSSLAS
Trigger: AGAAGCCAAAGAACTGCTGCAGGAGTCACAGGAGGA...TGAAGAGGATGGTGGGGTTGGGAGGTATAACCCTGCTCCTCTCTCCCAGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS GCA 90 bp GCCCCCGGGGCCCAGCCTCCGTGCTGCGCACTGGGTCAGGCAGTCTaGGCGGCGGAGCGCTGCACGGAGAAGCTGTCGCTCCCAGGACCC +
Preference number: 5 (lower is better)
Translates to: APGAQPPCCALGQAV*AAERCTEKLSLPGP
Trigger: GGGTCCTGGGAGCGACAGCTTCTCCGTGCAGCGCTCCGCCGCGCAGACTGCCTGACCCAGTGCGCAGCACGGAGGCTGGGCCCCGGGGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS GCA 90 bp CCTCCGTGCTGCGCACTGGGTCAGGCAGTCTGCGCGGCGGAGCGCTaGACGGAGAAGCTGTCGCTCCCAGGACCCCTGCGTGGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: PPCCALGQAVCAAER*TEKLSLPGPLRGSR
Trigger: CCGGGACCCACGCAGGGGTCCTGGGAGCGACAGCTTCTCCGTGCAGCGCTCCGCCGCGCAGACTGCCTGACCCAGTGCGCAGCACGGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS CCA 90 bp AGTGCCAGGGCACAGCGCCGTCCCCGAGTCACGGCCCACACCCCATaGGGATTCTCGACACCGGAGCTGAAGGCCACAAGGCGCCCACAG +
Preference number: 5 (lower is better)
Translates to: SARAQRRPRVTAHTP*GFSTPELKATRRPQ
Trigger: CTGTGGGCGCCTTGTGGCCTTCAGCTCCGGTGTCGAGAATCCCCATGGGGTGTGGGCCGTGACTCGGGGACGGCGCTGTGCCCTGGCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000612048.4
CDS-3UTR CAA 90 bp GGGAGGCACAGTGTTCCCCATCTGTCCAGGGCTGCAGGTCCGGCAGCGGGGCCCTGGTTCAGAGCCCTCTaGGCAGCCTCATCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: GRHSVPHLSRAAGPAAGPWFRAL*AASSSG
Trigger: CCCGGAGGATGAGGCTGCCAAGAGGGCTCTGAACCA...GGGCCCCGCTGCCGGACCTGCAGCCCTGGACAGATGGGGAACACTGTGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS GCA 90 bp CCAGGTCTGGGCATCAGACGGGCCCGGGTGCCTCCTGTGCTCACCTaGGCAGCCTTAAGCACCGTGAGCCCCTCGAAGCGTTCATGGGGG +
Preference number: 5 (lower is better)
Translates to: PGLGIRRARVPPVLT*AALSTVSPSKRSWG
Trigger: CCCCCATGAACGCTTCGAGGGGCTCACGGTGCTTAAGGCTGCGCAGGTGAGCACAGGAGGCACCCGGGCCCGTCTGATGCCCAGACCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541956.5
CDS TCA 90 bp CCCTCACAGTCAGCACGGCAGCTCTCCATCTGGGCCAGGCTCCCCTaGAGAGCCTCCTCTAGCCTGGGCAGTGCCAGTCCTGCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: PSQSARQLSIWARLP*RASSSLGSASPASW
Trigger: CCAGGAGGCAGGACTGGCACTGCCCAGGCTAGAGGAGGCTCTTCAGGGGAGCCTGGCCCAGATGGAGAGCTGCCGTGCTGACTGTGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000544813.5
ENST00000612048.4
CDS CCA 90 bp CCCAGCTGCATCCTTAGCCAGCTGCAGCAGCACCCCACACTCGGCTaGGGTGAGCAGCCCATCCAACACCGCCCGCTCCGACCCATTCAG +
Preference number: 5 (lower is better)
Translates to: PSCILSQLQQHPTLG*GEQPIQHRPLRPIQ
Trigger: CTGAATGGGTCGGAGCGGGCGGTGTTGGATGGGCTGCTCACCCCAGCCGAGTGTGGGGTGCTGCTGCAGCTGGCTAAGGATGCAGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290510.10
ENST00000538102.5
ENST00000540406.5
ENST00000541956.5
ENST00000542976.2
ENST00000544200.5
ENST00000544949.5
ENST00000612048.4
CDS CCA 90 bp CCTCCCGAGTACCTTAGCCAGCTGCAGCAGCACCCCACACTCGGCTaGGGTGAGCAGCCCATCCAACACCGCCCGCTCCGACCCATTCAG +
Preference number: 5 (lower is better)
Translates to: PPEYLSQLQQHPTLG*GEQPIQHRPLRPIQ
Trigger: CTGAATGGGTCGGAGCGGGCGGTGTTGGATGGGCTGCTCACCCCAGCCGAGTGTGGGGTGCTGCTGCAGCTGGCTAAGGTACTCGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536140.5
ENST00000545596.1
CDS GCA 90 bp CCGCCCCATTCCCATTCTGCTCGCACTCCCCCTCGGCTGCTCCTCTaGGATCTCAAGAGGTCCTCGCGGTCGCTTAGCCAGCTCCTACGC +
Preference number: 5 (lower is better)
Translates to: PPHSHSARTPPRLLL*DLKRSSRSLSQLLR
Trigger: GCGTAGGAGCTGGCTAAGCGACCGCGAGGACCTCTTGAGATCGCAGAGGAGCAGCCGAGGGGGAGTGCGAGCAGAATGGGAATGGGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536140.5
CDS GCA 90 bp CTCCCGCCAGCACTCTCCCGTGTCAGGGTCCAGGACGCAGTTGTCTaGGTGCACTGGGTGACTCAGGTCCATGCGCTGCTCTTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: LPPALSRVRVQDAVV*VHWVTQVHALLLLS
Trigger: GGAGAGCAAGAGCAGCGCATGGACCTGAGTCACCCAGTGCACGCAGACAACTGCGTCCTGGACCCTGACACGGGAGAGTGCTGGCGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000544200.5
ENST00000612048.4
CDS GCA 90 bp GAAGGCAAGGGGAGGGTGGTCTCGGCCCTAGCCCCTGCCCAACTCTaGCGCTCTCCACCCATGGGTTTGGAGTCTGTCAGCATCCAGCTC +
Preference number: 5 (lower is better)
Translates to: EGKGRVVSALAPAQL*RSPPMGLESVSIQL
Trigger: GAGCTGGATGCTGACAGACTCCAAACCCATGGGTGGAGAGCGGCAGAGTTGGGCAGGGGCTAGGGCCGAGACCACCCTCCCCTTGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541956.5
CDS CCA 90 bp TGGATGTCCTCTCTGGGTCCGAGGCCAGGTCTCGGCTCTCCCAGCTaGGCCTGGTACTGGTTCAGAGCCCTCTTGGCAGCCTCATCCTCC +
Preference number: 5 (lower is better)
Translates to: WMSSLGPRPGLGSPS*AWYWFRALLAASSS
Trigger: GGAGGATGAGGCTGCCAAGAGGGCTCTGAACCAGTACCAGGCCCAGCTGGGAGAGCCGAGACCTGGCCTCGGACCCAGAGAGGACATCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000538102.5
ENST00000612048.4
CDS GCA 90 bp GGGGTGAGCAGCCCATCCAACACCGCCCGCTCCGACCCATTCAGCTaGCTGGAATCCTGGGTCAAGGTCACACCCTCCAGGAGAAGGACA +
Preference number: 5 (lower is better)
Translates to: GVSSPSNTARSDPFS*LESWVKVTPSRRRT
Trigger: TGTCCTTCTCCTGGAGGGTGTGACCTTGACCCAGGATTCCAGGCAGCTGAATGGGTCGGAGCGGGCGGTGTTGGATGGGCTGCTCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000538102.5
ENST00000540406.5
ENST00000541956.5
ENST00000542976.2
ENST00000544200.5
ENST00000544949.5
ENST00000545596.1
ENST00000612048.4
CDS GCA 90 bp TCAAGGAGCTGGCTCAGCCACTCACAGCTCCTCCCGAACCCGAGGTaGCCTTCCAGTCTTGTCTTGGACCCTCTGGTGCCTGCGGCTAGG +
Preference number: 5 (lower is better)
Translates to: SRSWLSHSQLLPNPR*PSSLVLDPLVPAAR
Trigger: CCTAGCCGCAGGCACCAGAGGGTCCAAGACAAGACTGGAAGGGCACCTCGGGTTCGGGAGGAGCTGTGAGTGGCTGAGCCAGCTCCTTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000612048.4
CDS GCA 90 bp TCTTCTCTTGATCCTCTCTCAGGGGTGAGAGATGCGCTCAGTGGGTaGCCAGGACAGTCCAGACCCAGCCTCCCAGCTCGGGCCAAGCCC +
Preference number: 5 (lower is better)
Translates to: SSLDPLSGVRDALSG*PGQSRPSLPARAKP
Trigger: GGGCTTGGCCCGAGCTGGGAGGCTGGGTCTGGACTGTCCTGGGCACCCACTGAGCGCATCTCTCACCCCTGAGAGAGGATCAAGAGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542976.2
ENST00000544949.5
ENST00000545596.1
CDS CCA 90 bp GGTTGGGAAGGAAGTCTGGGACAGGGAAGCTGCGACCAGGGCGTGTaGCTGTTTCCCCCACACAGCGTTGCCGGCACTGCAGGACCTGAA +
Preference number: 5 (lower is better)
Translates to: GWEGSLGQGSCDQGV*LFPPHSVAGTAGPE
Trigger: TTCAGGTCCTGCAGTGCCGGCAACGCTGTGTGGGGGAAACAGCCACACGCCCTGGTCGCAGCTTCCCTGTCCCAGACTTCCTTCCCAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000538102.5
ENST00000544813.5
ENST00000612048.4
CDS-3UTR CAA 90 bp CCTCCCCTGCCATTTCTGTTCAGGGAGGCACAGTGTTCCCCATCTGTCCAGGGCTTCCCCCACACAGCGTaGCCGGCACTGCAGGACCTG +
Preference number: 5 (lower is better)
Translates to: PPLPFLFREAQCSPSVQGFPHTA*PALQDL
Trigger: CAGGTCCTGCAGTGCCGGCAACGCTGTGTGGGGGAA...GCCCTGGACAGATGGGGAACACTGTGCCTCCCTGAACAGAAATGGCAGGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS TCA 90 bp TCTCCCGTGTCAGGGTCCAGGACGCAGTTGTCTGCGTGCACTGGGTaGCTCAGGTCCATGCGCTGCTCTTGCTCTCCTTCTATGGCGCTG +
Preference number: 5 (lower is better)
Translates to: SPVSGSRTQLSACTG*LRSMRCSCSPSMAL
Trigger: CAGCGCCATAGAAGGAGAGCAAGAGCAGCGCATGGACCTGAGTCACCCAGTGCACGCAGACAACTGCGTCCTGGACCCTGACACGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000544200.5
ENST00000612048.4
CDS CCA 90 bp GTCTCGGCTCTCCCAGCTGGGCCTGGTACTGGTTCAGAGCCCTCTTaGCAGCCTCATCCTCCGGGTAGAAGAGCAGGACACTCAGGACAT +
Preference number: 5 (lower is better)
Translates to: VSALPAGPGTGSEPS*QPHPPGRRAGHSGH
Trigger: ATGTCCTGAGTGTCCTGCTCTTCTACCCGGAGGATGAGGCTGCCAAGAGGGCTCTGAACCAGTACCAGGCCCAGCTGGGAGAGCCGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000538102.5
ENST00000612048.4
CDS CCA 90 bp GCACTCTCCCGTGTCAGGGTCCAGGACGCAGTTGTCTGCGTGCACTaGGTGACTCAGGTCCATGCGCTGCTCTTGCTCTCCTTCTATGGC +
Preference number: 5 (lower is better)
Translates to: ALSRVRVQDAVVCVH*VTQVHALLLLSFYG
Trigger: GCCATAGAAGGAGAGCAAGAGCAGCGCATGGACCTGAGTCACCCAGTGCACGCAGACAACTGCGTCCTGGACCCTGACACGGGAGAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000544200.5
ENST00000612048.4
CDS CCA 90 bp CCATCCAACACCGCCCGCTCCGACCCATTCAGCTGCCTGGAATCCTaGGTCAAGGTCACACCCTCCAGGAGAAGGACATCTGCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: PSNTARSDPFSCLES*VKVTPSRRRTSARE
Trigger: TTCCCTGGCAGATGTCCTTCTCCTGGAGGGTGTGACCTTGACCCAGGATTCCAGGCAGCTGAATGGGTCGGAGCGGGCGGTGTTGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544949.5
ENST00000545596.1
CDS GCA 90 bp AGCCTCATGGAAGACTGGCCAATCAGAACCGCCCACCGCCCGAACTaGAGATCCCCTAGAGGCCAGAACGTTGGGACTCTCAGAAGGCTG +
Preference number: 5 (lower is better)
Translates to: SLMEDWPIRTAHRPN*RSPRGQNVGTLRRL
Trigger: CAGCCTTCTGAGAGTCCCAACGTTCTGGCCTCTAGGGGATCTGCAGTTCGGGCGGTGGGCGGTTCTGATTGGCCAGTCTTCCATGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536140.5
CDS GCA 90 bp CTCCCGCATCTGCAGGTGCATGGGGTTTGCTACAAAGAAGGTGTGTaGTGCCGCAGCTGCCAGATCCAGCTTCTTGCCTCCGTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LPHLQVHGVCYKEGV*CRSCQIQLLASVCS
Trigger: GGAGCAGACGGAGGCAAGAAGCTGGATCTGGCAGCTGCGGCAGCACACACCTTCTTTGTAGCAAACCCCATGCACCTGCAGATGCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544813.5
CDS CCA 90 bp TCAAGATGGCCTTCCACAAGTCAAGTGGCCACATCCTCAAGGAGCTaGCTCAGCCACTCACAGCTCCTCCCGAACCCGAGGTGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: SRWPSTSQVATSSRS*LSHSQLLPNPRCPS
Trigger: GGAAGGGCACCTCGGGTTCGGGAGGAGCTGTGAGTGGCTGAGCCAGCTCCTTGAGGATGTGGCCACTTGACTTGTGGAAGGCCATCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000612048.4
CDS GCA 90 bp CAGGTGCATGGGGTTTGCTACAAAGAAGGTGTGTGCTGCCGCAGCTaGCAGATCCAGCTTCTTCAACTGAGGAGGCGAAGGGAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: QVHGVCYKEGVCCRS*QIQLLQLRRRREEG
Trigger: GCCCTCCTCCCTTCGCCTCCTCAGTTGAAGAAGCTGGATCTGGCAGCTGCGGCAGCACACACCTTCTTTGTAGCAAACCCCATGCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536140.5
ENST00000612048.4
CDS CCA 90 bp ACTGCAGATCCCCTAGAGGCCAGAACGTTGGGACTCTCAGAAGGCTaGCACCGAGGGAAAGGGGATCTAAAGACGTCGGAGTTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: TADPLEARTLGLSEG*HRGKGDLKTSELGG
Trigger: CCCACCCAACTCCGACGTCTTTAGATCCCCTTTCCCTCGGTGCCAGCCTTCTGAGAGTCCCAACGTTCTGGCCTCTAGGGGATCTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536140.5
CDS CCA 90 bp CCATCCAACACCGCCCGCTCCGACCCATTCAGCTGCCTGGAATCCTaGGTCAAGGTCACACCCTCCAGGAGAAGGACATCTGAGCTTTTC +
Preference number: 5 (lower is better)
Translates to: PSNTARSDPFSCLES*VKVTPSRRRTSELF
Trigger: GAAAAGCTCAGATGTCCTTCTCCTGGAGGGTGTGACCTTGACCCAGGATTCCAGGCAGCTGAATGGGTCGGAGCGGGCGGTGTTGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538102.5
CDS-3UTR CAA 90 bp GCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGATGGCCTTCGTGACAGTGAGGGCGTaGGGCTCCGTGAAGAACAGG +
Preference number: 5 (lower is better)
Translates to: APDVTQGLPVCPGIKMAFVTVRA*GSVKNR
Trigger: CCTGTTCTTCACGGAGCCCAACGCCCTCACTGTCAC...GAAGGCCATCTTGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CAA 90 bp TCAGCCTCCTCCCCTGCCATTTCTGTTCAGGGAGGCACAGTGTTCCCCATCTGTCCTTCCAGTCTTGTCTaGGACCCTCTGGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: SASSPAISVQGGTVFPICPSSLV*DPLVPA
Trigger: CGCAGGCACCAGAGGGTCCAAGACAAGACTGGAAGG...ACAGATGGGGAACACTGTGCCTCCCTGAACAGAAATGGCAGGGGAGGAGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS GCA 90 bp CTCCCGCATCTGCAGGTGCATGGGGTTTGCTACAAAGAAGGTGTGTaGTGCCGCAGCTGCCAGATCCAGCTTCTTCAACTGAGGAGGCGA +
Preference number: 5 (lower is better)
Translates to: LPHLQVHGVCYKEGV*CRSCQIQLLQLRRR
Trigger: TCGCCTCCTCAGTTGAAGAAGCTGGATCTGGCAGCTGCGGCAGCACACACCTTCTTTGTAGCAAACCCCATGCACCTGCAGATGCGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536140.5
ENST00000612048.4
CDS CCA 90 bp GCTTCCTGTGTGTCCTGGCATCAAGATGGCCTTCCACAAGTCAAGTaGCCACATCCTCAAGGAGCTGGCTCAGCCACTCACAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ASCVSWHQDGLPQVK*PHPQGAGSATHSSS
Trigger: GGAGGAGCTGTGAGTGGCTGAGCCAGCTCCTTGAGGATGTGGCCACTTGACTTGTGGAAGGCCATCTTGATGCCAGGACACACAGGAAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000612048.4
CDS CCA 90 bp CCTTCTCCCTCCCAGGAACTCACCCTTCCAGTAGGTCAAGGGCTTTaGCTTCACGGGCTCATGGTCCCAAGGCCTCTTCTCTTGATCCTC +
Preference number: 5 (lower is better)
Translates to: PSPSQELTLPVGQGL*LHGLMVPRPLLLIL
Trigger: GAGGATCAAGAGAAGAGGCCTTGGGACCATGAGCCCGTGAAGCCAAAGCCCTTGACCTACTGGAAGGGTGAGTTCCTGGGAGGGAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544949.5
ENST00000545596.1
CDS CCA 90 bp CACACCCTCCAGGAGAAGGACATCCTTCCAGTAGGTCAAGGGCTTTaGCTTCACGGGCTCATGGTCCCAAGGCCTCTTCTCTTGATCCTC +
Preference number: 5 (lower is better)
Translates to: HTLQEKDILPVGQGL*LHGLMVPRPLLLIL
Trigger: GAGGATCAAGAGAAGAGGCCTTGGGACCATGAGCCCGTGAAGCCAAAGCCCTTGACCTACTGGAAGGATGTCCTTCTCCTGGAGGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000540406.5
ENST00000541956.5
ENST00000542976.2
ENST00000612048.4
CDS CCA 90 bp AGGCTGGCACCGAGGGAAAGGGGATCTAAAGACGTCGGAGTTGGGTaGGACATGGGTCTCAGGACTTCAGGACCTCAATTTGGGAGACCA +
Preference number: 5 (lower is better)
Translates to: RLAPRERGSKDVGVG*DMGLRTSGPQFGRP
Trigger: TGGTCTCCCAAATTGAGGTCCTGAAGTCCTGAGACCCATGTCCCACCCAACTCCGACGTCTTTAGATCCCCTTTCCCTCGGTGCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536140.5
CDS CCA 90 bp CACACCCTCCAGGAGAAGGACATCCTTCCAGTAGGTCAAGGGCTTTaGCTTCACGGGCTCATGGTCCCAAGGCCTCTTCTCTTGATCCTG +
Preference number: 5 (lower is better)
Translates to: HTLQEKDILPVGQGL*LHGLMVPRPLLLIL
Trigger: CAGGATCAAGAGAAGAGGCCTTGGGACCATGAGCCCGTGAAGCCAAAGCCCTTGACCTACTGGAAGGATGTCCTTCTCCTGGAGGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544200.5
CDS-3UTR CAA 90 bp TGTCCTGGCATCAAGATGGCCTTCCACAAGTCAAGTGGCCACATCCTCAAGGAGAGCCGCCTCAGCTGGTaGGGAAGGAAGTCTGGGACA +
Preference number: 5 (lower is better)
Translates to: CPGIKMAFHKSSGHILKESRLSW*GRKSGT
Trigger: TGTCCCAGACTTCCTTCCCAACCAGCTGAGGCGGCT...CTCCTTGAGGATGTGGCCACTTGACTTGTGGAAGGCCATCTTGATGCCAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CAA 90 bp TCCTGTGTGTCCTGGCATCAAGATGGCCTTCCACAAGTCAAGTGGCCACATCCTGGTGCCCTTCCAGTCTaGTCTTGGACCCTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: SCVSWHQDGLPQVKWPHPGALPV*SWTLWC
Trigger: GCACCAGAGGGTCCAAGACAAGACTGGAAGGGCACC...AGGATGTGGCCACTTGACTTGTGGAAGGCCATCTTGATGCCAGGACACACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS GCA 90 bp CTCCCGCATCTGCAGGTGCATGGGGTTTGCTACAAAGAAGGTGTGTaGTGCCGCAGCTGCCAGATCCAGCTTCTTCAACTGGTAATAGGC +
Preference number: 5 (lower is better)
Translates to: LPHLQVHGVCYKEGV*CRSCQIQLLQLVIG
Trigger: GCCTATTACCAGTTGAAGAAGCTGGATCTGGCAGCTGCGGCAGCACACACCTTCTTTGTAGCAAACCCCATGCACCTGCAGATGCGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS CCA 90 bp CACCGAGGGAAAGGGGATCTAAAGACGTCGGAGTTGGGTGGGACATaGGTCTCAGGACTTCAGGACCTCAATTTGGGAGACCAGGTGGAA +
Preference number: 5 (lower is better)
Translates to: HRGKGDLKTSELGGT*VSGLQDLNLGDQVE
Trigger: TTCCACCTGGTCTCCCAAATTGAGGTCCTGAAGTCCTGAGACCCATGTCCCACCCAACTCCGACGTCTTTAGATCCCCTTTCCCTCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536140.5
CDS-3UTR CAA 90 bp GTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGATGGCCTTCCACAAGTCAGCAGGTGCATGGGGTTaGCTACAAAGAAGGTGTGTG +
Preference number: 5 (lower is better)
Translates to: VTQGLPVCPGIKMAFHKSAGAWG*LQRRCV
Trigger: CACACACCTTCTTTGTAGCAAACCCCATGCACCTGC...TGACTTGTGGAAGGCCATCTTGATGCCAGGACACACAGGAAGCCCCTGTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CAA 90 bp AGAGCTTGCTGTTCTGCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCCCAAGGCCTCTTCTCTaGATCCTCTCTGAGCTTTTC +
Preference number: 5 (lower is better)
Translates to: RACCSAPDVTQGLPVCPGPRPLL*ILSELF
Trigger: GAAAAGCTCAGAGAGGATCAAGAGAAGAGGCCTTGG...GCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGCAGAACAGCAAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CAA 90 bp TGTCCTGGCATCAAGATGGCCTTCCACAAGTCAAGTGGCCACATCCTCAAGGAGAGTAGGTCAAGGGCTTaGGCTTCACGGGCTCATGGT +
Preference number: 5 (lower is better)
Translates to: CPGIKMAFHKSSGHILKESRSRA*ASRAHG
Trigger: ACCATGAGCCCGTGAAGCCAAAGCCCTTGACCTACT...CTCCTTGAGGATGTGGCCACTTGACTTGTGGAAGGCCATCTTGATGCCAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CAA 90 bp CCAACCCCACCATCCTCTTCATTTAAAGCATCAGCCTCCTCCCCTGCCATTTCTGTCCATGCGCTGCTCTaGCTCTCCTTCTATGGCGCT +
Preference number: 5 (lower is better)
Translates to: PTPPSSSFKASASSPAISVHALL*LSFYGA
Trigger: AGCGCCATAGAAGGAGAGCAAGAGCAGCGCATGGAC...AGAAATGGCAGGGGAGGAGGCTGATGCTTTAAATGAAGAGGATGGTGGGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CAA 90 bp TGCTGTTCTGCTCCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGTCCTGCAGCAGTTCTTaGGCTTCTATCCACTCCTGC +
Preference number: 5 (lower is better)
Translates to: CCSAPDVTQGLPVCPGIKSCSSS*ASIHSC
Trigger: GCAGGAGTGGATAGAAGCCAAAGAACTGCTGCAGGA...CTTGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGGAGCAGAACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS-3UTR CAA 90 bp CCTGATGTCACACAGGGGCTTCCTGTGTGTCCTGGCATCAAGATGGCCTTCCACTCTTCACGACCTTTATaGCACAGACTGGGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: PDVTQGLPVCPGIKMAFHSSRPL*HRLGER
Trigger: CCTCTCTCCCAGTCTGTGCAATAAAGGTCGTGAAGA...GTGGAAGGCCATCTTGATGCCAGGACACACAGGAAGCCCCTGTGTGACATCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS GCA 72 bp GCCCAGCCTCCGTGCTGCGCACTGGGTCAGGCAGTCTaGGCGGCGGAGCGCTGCACGGAGAAGCTGTCGCTC +
Preference number: 6 (lower is better)
Translates to: AQPPCCALGQAV*AAERCTEKLSL
Trigger: GAGCGACAGCTTCTCCGTGCAGCGCTCCGCCGCGCAGACTGCCTGACCCAGTGCGCAGCACGGAGGCTGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS GCA 72 bp TGCGCACTGGGTCAGGCAGTCTGCGCGGCGGAGCGCTaGACGGAGAAGCTGTCGCTCCCAGGACCCCTGCGT +
Preference number: 6 (lower is better)
Translates to: CALGQAVCAAER*TEKLSLPGPLR
Trigger: ACGCAGGGGTCCTGGGAGCGACAGCTTCTCCGTGCAGCGCTCCGCCGCGCAGACTGCCTGACCCAGTGCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS TCA 72 bp CGGCCCACACCCCATGGGGATTCTCGACACCGGAGCTaGAGGCCACAAGGCGCCCACAGCGAGGACGCACCC +
Preference number: 6 (lower is better)
Translates to: RPTPHGDSRHRS*RPQGAHSEDAP
Trigger: GGGTGCGTCCTCGCTGTGGGCGCCTTGTGGCCTTCAGCTCCGGTGTCGAGAATCCCCATGGGGTGTGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000612048.4
CDS CCA 72 bp GCACAGCGCCGTCCCCGAGTCACGGCCCACACCCCATaGGGATTCTCGACACCGGAGCTGAAGGCCACAAGG +
Preference number: 6 (lower is better)
Translates to: AQRRPRVTAHTP*GFSTPELKATR
Trigger: CCTTGTGGCCTTCAGCTCCGGTGTCGAGAATCCCCATGGGGTGTGGGCCGTGACTCGGGGACGGCGCTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000612048.4
CDS GCA 72 bp CCACAACCTCCGCCTCCCGGGTTCAGGCGCTTCTCCTaGCTCAGCCTCCCGAGTACCTTAGCCAGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: PQPPPPGFRRFS*LSLPSTLASCS
Trigger: GCTGCAGCTGGCTAAGGTACTCGGGAGGCTGAGGCAGGAGAAGCGCCTGAACCCGGGAGGCGGAGGTTGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536140.5
ENST00000545596.1
CDS GCA 72 bp GGGAGGGTGGTCTCGGCCCTAGCCCCTGCCCAACTCTaGCGCTCTCCACCCATGGGTTTGGAGTCTGTCAGC +
Preference number: 6 (lower is better)
Translates to: GRVVSALAPAQL*RSPPMGLESVS
Trigger: GCTGACAGACTCCAAACCCATGGGTGGAGAGCGGCAGAGTTGGGCAGGGGCTAGGGCCGAGACCACCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541956.5
CDS GCA 72 bp GGAAGGCAAGGGGAGGGTGGTCTCGGCCCTAGCCCCTaGCCAACTCTGCCGCTCTCCACCCATGGGTTTGGA +
Preference number: 6 (lower is better)
Translates to: GRQGEGGLGPSP*PTLPLSTHGFG
Trigger: TCCAAACCCATGGGTGGAGAGCGGCAGAGTTGGGCAGGGGCTAGGGCCGAGACCACCCTCCCCTTGCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541956.5
CDS CCA 72 bp TCTCTGGGTCCGAGGCCAGGTCTCGGCTCTCCCAGCTaGGCCTGGTACTGGTTCAGAGCCCTCTTGGCAGCC +
Preference number: 6 (lower is better)
Translates to: SLGPRPGLGSPS*AWYWFRALLAA
Trigger: GGCTGCCAAGAGGGCTCTGAACCAGTACCAGGCCCAGCTGGGAGAGCCGAGACCTGGCCTCGGACCCAGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000538102.5
ENST00000612048.4
CDS CCA 72 bp ATCCTTAGCCAGCTGCAGCAGCACCCCACACTCGGCTaGGGTGAGCAGCCCATCCAACACCGCCCGCTCCGA +
Preference number: 6 (lower is better)
Translates to: ILSQLQQHPTLG*GEQPIQHRPLR
Trigger: TCGGAGCGGGCGGTGTTGGATGGGCTGCTCACCCCAGCCGAGTGTGGGGTGCTGCTGCAGCTGGCTAAGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290510.10
ENST00000538102.5
ENST00000540406.5
ENST00000541956.5
ENST00000542976.2
ENST00000544200.5
ENST00000544949.5
ENST00000612048.4
CDS CCA 72 bp TACCTTAGCCAGCTGCAGCAGCACCCCACACTCGGCTaGGGTGAGCAGCCCATCCAACACCGCCCGCTCCGA +
Preference number: 6 (lower is better)
Translates to: YLSQLQQHPTLG*GEQPIQHRPLR
Trigger: TCGGAGCGGGCGGTGTTGGATGGGCTGCTCACCCCAGCCGAGTGTGGGGTGCTGCTGCAGCTGGCTAAGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536140.5
ENST00000545596.1
CDS CAA 72 bp CTCCTCCCGAACCCGAGGTGCCCTTCCAGTCTTGTCTaGGACCCTCTGGTGCCTGCGGCTAGGGGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: LLPNPRCPSSLV*DPLVPAARGLW
Trigger: CCAGAGCCCCCTAGCCGCAGGCACCAGAGGGTCCAAGACAAGACTGGAAGGGCACCTCGGGTTCGGGAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000612048.4
CDS CAA 72 bp CACAGCTCCTCCCGAACCCGAGGTGCCCTTCCAGTCTaGTCTTGGACCCTCTGGTGCCTGCGGCTAGGGGGC +
Preference number: 6 (lower is better)
Translates to: HSSSRTRGALPV*SWTLWCLRLGG
Trigger: GCCCCCTAGCCGCAGGCACCAGAGGGTCCAAGACAAGACTGGAAGGGCACCTCGGGTTCGGGAGGAGCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000612048.4
CDS CAA 90 bp CACTCACAGCTCCTCCCGAACCCGAGGTGCCCTTCCAGTCTTGTCTaGGACCCTCTGGTGCCTGCGGCTAGGGGGCTCTGGGGAAGGGTC +
Preference number: 6 (lower is better)
Translates to: HSQLLPNPRCPSSLV*DPLVPAARGLWGRV
Trigger: GACCCTTCCCCAGAGCCCCCTAGCCGCAGGCACCAGAGGGTCCAAGACAAGACTGGAAGGGCACCTCGGGTTCGGGAGGAGCTGTGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000612048.4
CDS TCA 72 bp TCAGCACGGCAGCTCTCCATCTGGGCCAGGCTCCCCTaGAGAGCCTCCTCTAGCCTGGGCAGTGCCAGTCCT +
Preference number: 6 (lower is better)
Translates to: SARQLSIWARLP*RASSSLGSASP
Trigger: AGGACTGGCACTGCCCAGGCTAGAGGAGGCTCTTCAGGGGAGCCTGGCCCAGATGGAGAGCTGCCGTGCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000544813.5
ENST00000612048.4
CDS GCA 72 bp CTAGGAAGAGGCGGCCCTGTCCCTCCATCTTCGATCTaGTCCCGTCCCACCTCACGACCTCCCCGCCCCATT +
Preference number: 6 (lower is better)
Translates to: LGRGGPVPPSSI*SRPTSRPPRPI
Trigger: AATGGGGCGGGGAGGTCGTGAGGTGGGACGGGAGCAGATCGAAGATGGAGGGACAGGGCCGCCTCTTCCTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536140.5
CDS GCA 72 bp GATCCTCTCTCAGGGGTGAGAGATGCGCTCAGTGGGTaGCCAGGACAGTCCAGACCCAGCCTCCCAGCTCGG +
Preference number: 6 (lower is better)
Translates to: DPLSGVRDALSG*PGQSRPSLPAR
Trigger: CCGAGCTGGGAGGCTGGGTCTGGACTGTCCTGGGCACCCACTGAGCGCATCTCTCACCCCTGAGAGAGGATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542976.2
ENST00000544949.5
ENST00000545596.1
CDS CCA 72 bp GCCCAGTGTGGGGGCGTCTCCAGGTCCCGGAAGCTCTaGGGCCGAACTCCCGACATTCGTCTGTACTTAGCC +
Preference number: 6 (lower is better)
Translates to: AQCGGVSRSRKL*GRTPDIRLYLA
Trigger: GGCTAAGTACAGACGAATGTCGGGAGTTCGGCCCCAGAGCTTCCGGGACCTGGAGACGCCCCCACACTGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000544813.5
ENST00000612048.4
CDS CCA 72 bp GGAAGTCTGGGACAGGGAAGCTGCGACCAGGGCGTGTaGCTGTTTCCCCCACACAGCGTTGCCGGCACTGCA +
Preference number: 6 (lower is better)
Translates to: GSLGQGSCDQGV*LFPPHSVAGTA
Trigger: TGCAGTGCCGGCAACGCTGTGTGGGGGAAACAGCCACACGCCCTGGTCGCAGCTTCCCTGTCCCAGACTTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000538102.5
ENST00000544813.5
ENST00000612048.4
CDS CCA 72 bp ACCCGAGGTGCCCTTCCAGTCTTGTCTTGGACCCTCTaGTGCCTGCGGCTAGGGGGCTCTGGGGAAGGGTCT +
Preference number: 6 (lower is better)
Translates to: TRGALPVLSWTL*CLRLGGSGEGS
Trigger: AGACCCTTCCCCAGAGCCCCCTAGCCGCAGGCACCAGAGGGTCCAAGACAAGACTGGAAGGGCACCTCGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000612048.4
CDS CCA 72 bp CCTGTCGTACCTTCTATGGCGCTGCGGCACACCAGGTaGGTGAAGGACAGATGCAGGGGCCGTTCCGGGGAG +
Preference number: 6 (lower is better)
Translates to: PVVPSMALRHTR*VKDRCRGRSGE
Trigger: CTCCCCGGAACGGCCCCTGCATCTGTCCTTCACCCACCTGGTGTGCCGCAGCGCCATAGAAGGTACGACAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541956.5
CDS CAA 72 bp CCGCCCGCAGAGGTCTGGCCTCGGAGGACCCCAACCTaGCCTCCGTCTGCTCCTTCCTTTCCGAAGCTACCT +
Preference number: 6 (lower is better)
Translates to: PPAEVWPRRTPT*PPSAPSFPKLP
Trigger: AGGTAGCTTCGGAAAGGAAGGAGCAGACGGAGGCAAGGTTGGGGTCCTCCGAGGCCAGACCTCTGCGGGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536140.5
CDS CAA 90 bp TCAGCCACTCACAGCTCCTCCCGAACCCGAGGTGCCCTTCCAGTCTaGTCTTGGACCCTCTGGTGCCTGCGGCTAGGGGGCTCTGGGGAA +
Preference number: 6 (lower is better)
Translates to: SATHSSSRTRGALPV*SWTLWCLRLGGSGE
Trigger: TTCCCCAGAGCCCCCTAGCCGCAGGCACCAGAGGGTCCAAGACAAGACTGGAAGGGCACCTCGGGTTCGGGAGGAGCTGTGAGTGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000612048.4
CDS GCA 72 bp AGCCCATCCAACACCGCCCGCTCCGACCCATTCAGCTaGCTGGAATCCTGGGTCAAGGTCACACCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SPSNTARSDPFS*LESWVKVTPSR
Trigger: CCTGGAGGGTGTGACCTTGACCCAGGATTCCAGGCAGCTGAATGGGTCGGAGCGGGCGGTGTTGGATGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000538102.5
ENST00000540406.5
ENST00000541956.5
ENST00000542976.2
ENST00000544200.5
ENST00000544949.5
ENST00000545596.1
ENST00000612048.4
CDS GCA 72 bp GCACTCTCCCGTGTCAGGGTCCAGGACGCAGTTGTCTaGGTGCACTGGGTGACTCAGGTCCATGCGCTGCTC +
Preference number: 6 (lower is better)
Translates to: ALSRVRVQDAVV*VHWVTQVHALL
Trigger: GAGCAGCGCATGGACCTGAGTCACCCAGTGCACGCAGACAACTGCGTCCTGGACCCTGACACGGGAGAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000544200.5
ENST00000612048.4
CDS GCA 72 bp TCCCATTCTGCTCGCACTCCCCCTCGGCTGCTCCTCTaGGATCTCAAGAGGTCCTCGCGGTCGCTTAGCCAG +
Preference number: 6 (lower is better)
Translates to: SHSARTPPRLLL*DLKRSSRSLSQ
Trigger: CTGGCTAAGCGACCGCGAGGACCTCTTGAGATCGCAGAGGAGCAGCCGAGGGGGAGTGCGAGCAGAATGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536140.5
CDS CCA 72 bp TCTTGCTCTCCTTCTATGGCGCTGCGGCACACCAGGTaGGTGAAGGACAGATGCAGGGGCCGTTCCGGGGAG +
Preference number: 6 (lower is better)
Translates to: SCSPSMALRHTR*VKDRCRGRSGE
Trigger: CTCCCCGGAACGGCCCCTGCATCTGTCCTTCACCCACCTGGTGTGCCGCAGCGCCATAGAAGGAGAGCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000540406.5
ENST00000544200.5
ENST00000612048.4
CDS CAA 90 bp AGGGAAGCTGCGACCAGGGCGTGTGGCTGTTTCCCCCACACAGCGTaGCCGGCACTGCAGGACCTGAATCCAGTGTCCTGCAATGGCCTC +
Preference number: 6 (lower is better)
Translates to: REAATRACGCFPHTA*PALQDLNPVSCNGL
Trigger: GAGGCCATTGCAGGACACTGGATTCAGGTCCTGCAGTGCCGGCAACGCTGTGTGGGGGAAACAGCCACACGCCCTGGTCGCAGCTTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000538102.5
ENST00000544813.5
ENST00000612048.4
CDS GCA 72 bp TGGCTCAGCCACTCACAGCTCCTCCCGAACCCGAGGTaGCCTTCCAGTCTTGTCTTGGACCCTCTGGTGCCT +
Preference number: 6 (lower is better)
Translates to: WLSHSQLLPNPR*PSSLVLDPLVP
Trigger: AGGCACCAGAGGGTCCAAGACAAGACTGGAAGGGCACCTCGGGTTCGGGAGGAGCTGTGAGTGGCTGAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000612048.4
CDS GCA 72 bp GCCTCCGTCTGCTCCTTCCTTTCCGAAGCTACCTCCTaGCCCAAGCGAAGGTTCACACTCACCACCACCCCC +
Preference number: 6 (lower is better)
Translates to: ASVCSFLSEATS*PKRRFTLTTTP
Trigger: GGGGGTGGTGGTGAGTGTGAACCTTCGCTTGGGGCAGGAGGTAGCTTCGGAAAGGAAGGAGCAGACGGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536140.5
CDS CCA 72 bp ACCGCCCGCTCCGACCCATTCAGCTGCCTGGAATCCTaGGTCAAGGTCACACCCTCCAGGAGAAGGACATCC +
Preference number: 6 (lower is better)
Translates to: TARSDPFSCLES*VKVTPSRRRTS
Trigger: GGATGTCCTTCTCCTGGAGGGTGTGACCTTGACCCAGGATTCCAGGCAGCTGAATGGGTCGGAGCGGGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000540406.5
ENST00000541956.5
ENST00000542976.2
ENST00000544200.5
ENST00000612048.4
CDS CAA 90 bp GAACCGCCCACCGCCCGAACTGCAGATCCCCTAGAGGCCAGAACGTaGGGACTCTCAGAAGGCTGGCACCGAGGGAAAGGGGATCTAAAG +
Preference number: 6 (lower is better)
Translates to: EPPTARTADPLEART*GLSEGWHRGKGDLK
Trigger: CTTTAGATCCCCTTTCCCTCGGTGCCAGCCTTCTGAGAGTCCCAACGTTCTGGCCTCTAGGGGATCTGCAGTTCGGGCGGTGGGCGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536140.5
CDS CCA 72 bp CATCCAACACCGCCCGCTCCGACCCATTCAGCTGCCTaGAATCCTGGGTCAAGGTCACACCCTCCAGGAGAA +
Preference number: 6 (lower is better)
Translates to: HPTPPAPTHSAA*NPGSRSHPPGE
Trigger: TTCTCCTGGAGGGTGTGACCTTGACCCAGGATTCCAGGCAGCTGAATGGGTCGGAGCGGGCGGTGTTGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000538102.5
ENST00000540406.5
ENST00000541956.5
ENST00000542976.2
ENST00000544200.5
ENST00000544949.5
ENST00000545596.1
ENST00000612048.4
CDS CCA 72 bp ACCGCCCGCTCCGACCCATTCAGCTGCCTGGAATCCTaGGTCAAGGTCACACCCTCCAGGAGAAGGACATCT +
Preference number: 6 (lower is better)
Translates to: TARSDPFSCLES*VKVTPSRRRTS
Trigger: AGATGTCCTTCTCCTGGAGGGTGTGACCTTGACCCAGGATTCCAGGCAGCTGAATGGGTCGGAGCGGGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538102.5
ENST00000544949.5
ENST00000545596.1
CDS GCA 72 bp AGCCATGTCCTCCCGCATCTGCAGGTGCATGGGGTTTaGTACAAAGAAGGTGTGTGCTGCCGCAGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: SHVLPHLQVHGV*YKEGVCCRSCQ
Trigger: CTGGCAGCTGCGGCAGCACACACCTTCTTTGTAGCAAACCCCATGCACCTGCAGATGCGGGAGGACATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000544813.5
ENST00000612048.4
CDS CCA 72 bp CCCCTAGAGGCCAGAACGTTGGGACTCTCAGAAGGCTaGCACCGAGGGAAAGGGGATCTAAAGACGTCGGAG +
Preference number: 6 (lower is better)
Translates to: PLEARTLGLSEG*HRGKGDLKTSE
Trigger: CTCCGACGTCTTTAGATCCCCTTTCCCTCGGTGCCAGCCTTCTGAGAGTCCCAACGTTCTGGCCTCTAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536140.5
CDS CAA 90 bp GCCTTCTCCCTCCCAGGAACTCACCCTTCCAGTAGGTCAAGGGCTTaGGCTTCACGGGCTCATGGTCCCAAGGCCTCTTCTCTTGATCCT +
Preference number: 6 (lower is better)
Translates to: AFSLPGTHPSSRSRA*ASRAHGPKASSLDP
Trigger: AGGATCAAGAGAAGAGGCCTTGGGACCATGAGCCCGTGAAGCCAAAGCCCTTGACCTACTGGAAGGGTGAGTTCCTGGGAGGGAGAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544949.5
ENST00000545596.1
CDS GCA 72 bp GGGGTTTGCTACAAAGAAGGTGTGTGCTGCCGCAGCTaGCAGATCCAGCTTCTTGCCTCCGTCTGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: GVCYKEGVCCRS*QIQLLASVCSF
Trigger: GAAGGAGCAGACGGAGGCAAGAAGCTGGATCTGGCAGCTGCGGCAGCACACACCTTCTTTGTAGCAAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544813.5
CDS GCA 72 bp CTGCAGGTGCATGGGGTTTGCTACAAAGAAGGTGTGTaGTGCCGCAGCTGCCAGATCCAGCTTCTTGCCTCC +
Preference number: 6 (lower is better)
Translates to: LQVHGVCYKEGV*CRSCQIQLLAS
Trigger: GGAGGCAAGAAGCTGGATCTGGCAGCTGCGGCAGCACACACCTTCTTTGTAGCAAACCCCATGCACCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544813.5
CDS CAA 72 bp TGGCACCGAGGGAAAGGGGATCTAAAGACGTCGGAGTaGGGTGGGACATGGGTCTCAGGACTTCAGGACCTC +
Preference number: 6 (lower is better)
Translates to: WHRGKGDLKTSE*GGTWVSGLQDL
Trigger: GAGGTCCTGAAGTCCTGAGACCCATGTCCCACCCAACTCCGACGTCTTTAGATCCCCTTTCCCTCGGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536140.5
CDS GCA 72 bp GGGGTTTGCTACAAAGAAGGTGTGTGCTGCCGCAGCTaGCAGATCCAGCTTCTTCAACTGAGGAGGCGAAGG +
Preference number: 6 (lower is better)
Translates to: GVCYKEGVCCRS*QIQLLQLRRRR
Trigger: CCTTCGCCTCCTCAGTTGAAGAAGCTGGATCTGGCAGCTGCGGCAGCACACACCTTCTTTGTAGCAAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536140.5
ENST00000612048.4
CDS CCA 72 bp CAGGAGAAGGACATCCTTCCAGTAGGTCAAGGGCTTTaGCTTCACGGGCTCATGGTCCCAAGGCCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: QEKDILPVGQGL*LHGLMVPRPLL
Trigger: GAGAAGAGGCCTTGGGACCATGAGCCCGTGAAGCCAAAGCCCTTGACCTACTGGAAGGATGTCCTTCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000540406.5
ENST00000541956.5
ENST00000542976.2
ENST00000544200.5
ENST00000612048.4
CDS CCA 72 bp GTGTCCTGGCATCAAGATGGCCTTCCACAAGTCAAGTaGCCACATCCTCAAGGAGCTGGCTCAGCCACTCAC +
Preference number: 6 (lower is better)
Translates to: VSWHQDGLPQVK*PHPQGAGSATH
Trigger: GTGAGTGGCTGAGCCAGCTCCTTGAGGATGTGGCCACTTGACTTGTGGAAGGCCATCTTGATGCCAGGACAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000612048.4
CDS CCA 72 bp CGGCCCCAGCTCTCAGAACATCCCTTTTCTCCACGCTaGGTCCTATCAGGTAGTCTCGGTCCCAAGAAAGCT +
Preference number: 6 (lower is better)
Translates to: RPQLSEHPFSPR*VLSGSLGPKKA
Trigger: AGCTTTCTTGGGACCGAGACTACCTGATAGGACCCAGCGTGGAGAAAAGGGATGTTCTGAGAGCTGGGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541956.5
CDS CAA 72 bp CCAGGAGAAGGACATCCTTCCAGTAGGTCAAGGGCTTaGGCTTCACGGGCTCATGGTCCCAAGGCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: PGEGHPSSRSRA*ASRAHGPKASS
Trigger: AGAAGAGGCCTTGGGACCATGAGCCCGTGAAGCCAAAGCCCTTGACCTACTGGAAGGATGTCCTTCTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000540406.5
ENST00000541956.5
ENST00000542976.2
ENST00000544200.5
ENST00000612048.4
CDS CAA 90 bp TCAGAAGGCTGGCACCGAGGGAAAGGGGATCTAAAGACGTCGGAGTaGGGTGGGACATGGGTCTCAGGACTTCAGGACCTCAATTTGGGA +
Preference number: 6 (lower is better)
Translates to: SEGWHRGKGDLKTSE*GGTWVSGLQDLNLG
Trigger: TCCCAAATTGAGGTCCTGAAGTCCTGAGACCCATGTCCCACCCAACTCCGACGTCTTTAGATCCCCTTTCCCTCGGTGCCAGCCTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536140.5
CDS GCA 72 bp CTGCAGGTGCATGGGGTTTGCTACAAAGAAGGTGTGTaGTGCCGCAGCTGCCAGATCCAGCTTCTTCAACTG +
Preference number: 6 (lower is better)
Translates to: LQVHGVCYKEGV*CRSCQIQLLQL
Trigger: CAGTTGAAGAAGCTGGATCTGGCAGCTGCGGCAGCACACACCTTCTTTGTAGCAAACCCCATGCACCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000612048.4
CDS GCA 72 bp CGTCTGTACTTAGCCATGTCCTCCCGCATCTGCAGGTaGATGGGGTTTGCTACAAAGAAGGTGTGTGCTGCC +
Preference number: 6 (lower is better)
Translates to: RLYLAMSSRICR*MGFATKKVCAA
Trigger: GGCAGCACACACCTTCTTTGTAGCAAACCCCATGCACCTGCAGATGCGGGAGGACATGGCTAAGTACAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000544813.5
ENST00000612048.4
CDS GCA 72 bp GGGGTTTGCTACAAAGAAGGTGTGTGCTGCCGCAGCTaGCAGATCCAGCTTCTTCAACTGGTAATAGGCCCT +
Preference number: 6 (lower is better)
Translates to: GVCYKEGVCCRS*QIQLLQLVIGP
Trigger: AGGGCCTATTACCAGTTGAAGAAGCTGGATCTGGCAGCTGCGGCAGCACACACCTTCTTTGTAGCAAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290510.10
CDS CCA 72 bp AAAGGGGATCTAAAGACGTCGGAGTTGGGTGGGACATaGGTCTCAGGACTTCAGGACCTCAATTTGGGAGAC +
Preference number: 6 (lower is better)
Translates to: KGDLKTSELGGT*VSGLQDLNLGD
Trigger: GTCTCCCAAATTGAGGTCCTGAAGTCCTGAGACCCATGTCCCACCCAACTCCGACGTCTTTAGATCCCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536140.5
CDS GCA 72 bp GACATTCGTCTGTACTTAGCCATGTCCTCCCGCATCTaGAGGTGCATGGGGTTTGCTACAAAGAAGGTGTGT +
Preference number: 6 (lower is better)
Translates to: DIRLYLAMSSRI*RCMGFATKKVC
Trigger: ACACACCTTCTTTGTAGCAAACCCCATGCACCTGCAGATGCGGGAGGACATGGCTAAGTACAGACGAATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290510.10
ENST00000536140.5
ENST00000544813.5
ENST00000612048.4