RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for P2RY2 (Homo sapiens)

Ensembl gene IDs: ENSG00000175591

Ensembl transcript IDs: ENST00000311131.6, ENST00000393596.2, ENST00000393597.7

Found 727 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTCAGGCCCCTGCACTGGGCTCACTCCAAGGTCAGAGCATGAGCTaGACCTCTCCACCCACACCACTTGGGCTGCTATCCCAGGTGCCC +
Preference number: 1 (lower is better)
Translates to: GQAPALGSLQGQSMS*TSPPTPLGLLSQVP
Trigger: GGGCACCTGGGATAGCAGCCCAAGTGGTGTGGGTGGAGAGGTGCAGCTCATGCTCTGACCTTGGAGTGAGCCCAGTGCAGGGGCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 90 bp GACGTGCATACCAAGGGGCCAGGCAGTCCAACTGGGTTCCAGAGGTaGCCCTGGTTCACCCAGGGTCTCCAGTATCCACCCCCACCTGTG +
Preference number: 1 (lower is better)
Translates to: DVHTKGPGSPTGFQR*PWFTQGLQYPPPPV
Trigger: CACAGGTGGGGGTGGATACTGGAGACCCTGGGTGAACCAGGGGCACCTCTGGAACCCAGTTGGACTGCCTGGCCCCTTGGTATGCACGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 90 bp GCATCAGGGCAGGAACTTCACCCACAAGGCAAGTGGCCTGGGCACTaGGCAGCAAGGTGGGACGTGCATACCAAGGGGCCAGGCAGTCCA +
Preference number: 1 (lower is better)
Translates to: ASGQELHPQGKWPGH*AARWDVHTKGPGSP
Trigger: TGGACTGCCTGGCCCCTTGGTATGCACGTCCCACCTTGCTGCTCAGTGCCCAGGCCACTTGCCTTGTGGGTGAAGTTCCTGCCCTGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 90 bp AGCAGCAAGGTGGGACGTGCATACCAAGGGGCCAGGCAGTCCAACTaGGTTCCAGAGGTGCCCCTGGTTCACCCAGGGTCTCCAGTATCC +
Preference number: 1 (lower is better)
Translates to: SSKVGRAYQGARQSN*VPEVPLVHPGSPVS
Trigger: GGATACTGGAGACCCTGGGTGAACCAGGGGCACCTCTGGAACCCAGTTGGACTGCCTGGCCCCTTGGTATGCACGTCCCACCTTGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 90 bp CACTCTGTAGTCTGGTCACTCCTGGCCAAGCCCCACCCTCCACCTTaGAGGAGGCAGGAGCTCCAGACATCGCACTGTGTGGCTCTGTGT +
Preference number: 1 (lower is better)
Translates to: HSVVWSLLAKPHPPP*RRQELQTSHCVALC
Trigger: ACACAGAGCCACACAGTGCGATGTCTGGAGCTCCTGCCTCCTGCAAGGTGGAGGGTGGGGCTTGGCCAGGAGTGACCAGACTACAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 90 bp ACCCTCCACCTTGCAGGAGGCAGGAGCTCCAGACATCGCACTGTGTaGCTCTGTGTGGCGGCAGTGGGGTCACTTCACTTCTCTGGTCAC +
Preference number: 1 (lower is better)
Translates to: TLHLAGGRSSRHRTV*LCVAAVGSLHFSGH
Trigger: GTGACCAGAGAAGTGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGAGCTCCTGCCTCCTGCAAGGTGGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 90 bp CACTTGGGCTGCTATCCCAGGTGCCCATCCCAGGAAGCTCAGTGGTaGGCTCTCACCACTGTAGCTCCAGTCCAGGAGCCACAGACTGGA +
Preference number: 1 (lower is better)
Translates to: HLGCYPRCPSQEAQW*ALTTVAPVQEPQTG
Trigger: TCCAGTCTGTGGCTCCTGGACTGGAGCTACAGTGGTGAGAGCTCACCACTGAGCTTCCTGGGATGGGCACCTGGGATAGCAGCCCAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 90 bp GCCAAGACAGAGGCAAGCCCAGGAATTCCCCCATTGGAGGAGGAGTaGCCAGGCAGAGCCAAGTCCTATCGAAGATGGGGAAAGCGAGGC +
Preference number: 1 (lower is better)
Translates to: AKTEASPGIPPLEEE*PGRAKSYRRWGKRG
Trigger: GCCTCGCTTTCCCCATCTTCGATAGGACTTGGCTCTGCCTGGCCACTCCTCCTCCAATGGGGGAATTCCTGGGCTTGCCTCTGTCTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 90 bp ACTCCAAGGTCAGAGCATGAGCTGCACCTCTCCACCCACACCACTTaGGCTGCTATCCCAGGTGCCCATCCCAGGAAGCTCAGTGGTGAG +
Preference number: 1 (lower is better)
Translates to: TPRSEHELHLSTHTT*AAIPGAHPRKLSGE
Trigger: CTCACCACTGAGCTTCCTGGGATGGGCACCTGGGATAGCAGCCCAAGTGGTGTGGGTGGAGAGGTGCAGCTCATGCTCTGACCTTGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 90 bp GAAATGGCTACCCTGCTGCCGTGGGAGGGTGCGAGCTCTCTAGCCTaGAGTGGCAAGTTTCTGAAGCTTGCTACTAGGGGCCCCCTCTTC +
Preference number: 1 (lower is better)
Translates to: EMATLLPWEGASSLA*SGKFLKLATRGPLF
Trigger: GAAGAGGGGGCCCCTAGTAGCAAGCTTCAGAAACTTGCCACTTCAGGCTAGAGAGCTCGCACCCTCCCACGGCAGCAGGGTAGCCATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 90 bp AGCCTGGAGTCAGCTGTCCAGCCTGCTTATGGCTCATGCACACCCTaGCCTCTTGCCCCATGTCTTTGCCTGGGATGCATCCTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: SLESAVQPAYGSCTP*PLAPCLCLGCILCV
Trigger: CACACACAGGATGCATCCCAGGCAAAGACATGGGGCAAGAGGGCAGGGTGTGCATGAGCCATAAGCAGGCTGGACAGCTGACTCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 90 bp CCTGCTTATGGCTCATGCACACCCTGCCCTCTTGCCCCATGTCTTTaGCTGGGATGCATCCTGTGTGTGGATGTTCTTCCGGTGAGCTGC +
Preference number: 1 (lower is better)
Translates to: PAYGSCTPCPLAPCL*LGCILCVDVLPVSC
Trigger: GCAGCTCACCGGAAGAACATCCACACACAGGATGCATCCCAGGCAAAGACATGGGGCAAGAGGGCAGGGTGTGCATGAGCCATAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 90 bp CGCTGTGGAGTCAGGCTCCAAATACAGCAAGCTTTGGGGATGTCCTaGCTTTCACAAGGCAGAGTGGGAAGGGTGGAGAGGTCAGAGGGG +
Preference number: 1 (lower is better)
Translates to: RCGVRLQIQQALGMS*LSQGRVGRVERSEG
Trigger: CCCCTCTGACCTCTCCACCCTTCCCACTCTGCCTTGTGAAAGGCAGGACATCCCCAAAGCTTGCTGTATTTGGAGCCTGACTCCACAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 90 bp ACACCCCAGTCAGGGAGAAATGGCTACCCTGCTGCCGTGGGAGGGTaGGAGCTCTCTAGCCTGAAGTGGCAAGTTTCTGAAGCTTGCTAC +
Preference number: 1 (lower is better)
Translates to: TPQSGRNGYPAAVGG*ELSSLKWQVSEACY
Trigger: GTAGCAAGCTTCAGAAACTTGCCACTTCAGGCTAGAGAGCTCGCACCCTCCCACGGCAGCAGGGTAGCCATTTCTCCCTGACTGGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 90 bp TGGGCCACCAGTCCCACTAAGCAGCCAAACAATCCCTGGGGTCCCTaGCAGGAGGGAAAACTCATTCCAACTGGTTGTGTCTCCCAGGAG +
Preference number: 1 (lower is better)
Translates to: WATSPTKQPNNPWGP*QEGKLIPTGCVSQE
Trigger: CTCCTGGGAGACACAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGGCTGCTTAGTGGGACTGGTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 90 bp CTGTGGACTCTTAATGAAGTGAGAGGTGGCTGCAGAGCACCATGGTaGACACCCCAGTCAGGGAGAAATGGCTACCCTGCTGCCGTGGGA +
Preference number: 1 (lower is better)
Translates to: LWTLNEVRGGCRAPW*TPQSGRNGYPAAVG
Trigger: TCCCACGGCAGCAGGGTAGCCATTTCTCCCTGACTGGGGTGTCCACCATGGTGCTCTGCAGCCACCTCTCACTTCATTAAGAGTCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 90 bp CCTGCCCTTGCCCAGCTCCAGACCAGTCCTCTGCTCCTAGATCTGTaGACTCTTAATGAAGTGAGAGGTGGCTGCAGAGCACCATGGTGG +
Preference number: 1 (lower is better)
Translates to: PALAQLQTSPLLLDL*TLNEVRGGCRAPWW
Trigger: CCACCATGGTGCTCTGCAGCCACCTCTCACTTCATTAAGAGTCCACAGATCTAGGAGCAGAGGACTGGTCTGGAGCTGGGCAAGGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 90 bp TTGGAAATGCCCGGGGAGCAGCTGTTGGTTGTGCCTTCACTGAGGTaGGGAAATTGGAACAGGGGAACAGGTCTCCAGGCCCTACAGTGC +
Preference number: 1 (lower is better)
Translates to: LEMPGEQLLVVPSLR*GNWNRGTGLQALQC
Trigger: GCACTGTAGGGCCTGGAGACCTGTTCCCCTGTTCCAATTTCCCCACCTCAGTGAAGGCACAACCAACAGCTGCTCCCCGGGCATTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 90 bp CACTGTGTGGCTCTGTGTGGCGGCAGTGGGGTCACTTCACTTCTCTaGTCACTTGATGCTGGGGAGAAACACTGCCTCCACCCTAGTCCT +
Preference number: 1 (lower is better)
Translates to: HCVALCGGSGVTSLL*SLDAGEKHCLHPSP
Trigger: AGGACTAGGGTGGAGGCAGTGTTTCTCCCCAGCATCAAGTGACCAGAGAAGTGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 90 bp AGCCCTCTCTGGGCCACCAGTCCCACTAAGCAGCCAAACAATCCCTaGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTTGTGTC +
Preference number: 1 (lower is better)
Translates to: SPLWATSPTKQPNNP*GPCQEGKLIPTGCV
Trigger: GACACAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGGCTGCTTAGTGGGACTGGTGGCCCAGAGAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 90 bp ATCATGCGAGGGGCCACTTATAGACCCTTCTGCCCTGCAGGGCTGTaGGTGTCGTGGGGCACTATAAAGGGCATGATTCTGGCCATCAGG +
Preference number: 1 (lower is better)
Translates to: IMRGATYRPFCPAGL*VSWGTIKGMILAIR
Trigger: CCTGATGGCCAGAATCATGCCCTTTATAGTGCCCCACGACACTCACAGCCCTGCAGGGCAGAAGGGTCTATAAGTGGCCCCTCGCATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 90 bp TGGGCACCTGGACAAGGTTCTGTAAACAGCACAGGCCCATGGTCCTaGAATCCACCTACTGCCAAGCAGGGCAGAGGTGGTCCCACACAT +
Preference number: 1 (lower is better)
Translates to: WAPGQGSVNSTGPWS*NPPTAKQGRGGPTH
Trigger: ATGTGTGGGACCACCTCTGCCCTGCTTGGCAGTAGGTGGATTTCAGGACCATGGGCCTGTGCTGTTTACAGAACCTTGTCCAGGTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 90 bp AGGCTGGACTCCAACCTAGGTACCTTGGCAGTACAGCCAGCTACTTaGATGGGAGTCAGGCCAGGGGTGTCATTGACCTTGAGCTCTTGC +
Preference number: 1 (lower is better)
Translates to: RLDSNLGTLAVQPAT*MGVRPGVSLTLSSC
Trigger: GCAAGAGCTCAAGGTCAATGACACCCCTGGCCTGACTCCCATGCAAGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGAGTCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR GCA 90 bp GGCTCATGCACACCCTGCCCTCTTGCCCCATGTCTTTGCCTGGGATaGATCCTGTGTGTGGATGTTCTTCCGGTGAGCTGCTTTTCTCAG +
Preference number: 1 (lower is better)
Translates to: GSCTPCPLAPCLCLG*ILCVDVLPVSCFSQ
Trigger: CTGAGAAAAGCAGCTCACCGGAAGAACATCCACACACAGGATGCATCCCAGGCAAAGACATGGGGCAAGAGGGCAGGGTGTGCATGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 90 bp GTCAGCTGTCCAGCCTGCTTATGGCTCATGCACACCCTGCCCTCTTaGCCCATGTCTTTGCCTGGGATGCATCCTGTGTGTGGATGTTCT +
Preference number: 1 (lower is better)
Translates to: VSCPACLWLMHTLPS*PMSLPGMHPVCGCS
Trigger: AGAACATCCACACACAGGATGCATCCCAGGCAAAGACATGGGGCAAGAGGGCAGGGTGTGCATGAGCCATAAGCAGGCTGGACAGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 90 bp GACCTCAGGTCACACAGCAAAAACTCCCCATTTGCTGCCTGCCCTTaGCCAGCTCCAGACCAGTCCTCTGCTCCTAGATCTGTGGACTCT +
Preference number: 1 (lower is better)
Translates to: DLRSHSKNSPFAACP*PAPDQSSAPRSVDS
Trigger: AGAGTCCACAGATCTAGGAGCAGAGGACTGGTCTGGAGCTGGGCAAGGGCAGGCAGCAAATGGGGAGTTTTTGCTGTGTGACCTGAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 90 bp GCAAGTGACCTCAGGTCACACAGCAAAAACTCCCCATTTGCTGCCTaGCCTTGCCCAGCTCCAGACCAGTCCTCTGCTCCTAGATCTGTG +
Preference number: 1 (lower is better)
Translates to: ASDLRSHSKNSPFAA*PCPAPDQSSAPRSV
Trigger: CACAGATCTAGGAGCAGAGGACTGGTCTGGAGCTGGGCAAGGGCAGGCAGCAAATGGGGAGTTTTTGCTGTGTGACCTGAGGTCACTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 90 bp GTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTaGCACCCAGTCCATTCCAGACCACTGTGCAAACTCAGCCCTCAT +
Preference number: 1 (lower is better)
Translates to: VHLLGWGYSSELSPP*HPVHSRPLCKLSPH
Trigger: ATGAGGGCTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAGATGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR CCA 90 bp GAGTCTGCAGCTGGGCTGGATAATCCCTGGGGTCTGCTCAGTGGATaGGCAACTCACGTGCCCTTTCACAGTGGCCTTCATGAGTCAACA +
Preference number: 1 (lower is better)
Translates to: ESAAGLDNPWGLLSG*ATHVPFHSGLHEST
Trigger: TGTTGACTCATGAAGGCCACTGTGAAAGGGCACGTGAGTTGCCCATCCACTGAGCAGACCCCAGGGATTATCCAGCCCAGCTGCAGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 90 bp GTGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTaGAAGCTTCCCTGCCATATCCTCATCCCCCGACCACACAATAGG +
Preference number: 1 (lower is better)
Translates to: VAEGNGLEKGPLCGW*KLPCHILIPRPHNR
Trigger: CCTATTGTGTGGTCGGGGGATGAGGATATGGCAGGGAAGCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
3UTR GCA 90 bp ACTCTACACGCTGAACCCTGGGCACCATGGATTCAAAGACATCTTTaGCACTGTGAGATCTCAGCCAAGTGTGGGGTGTGGGGTGGGAGG +
Preference number: 1 (lower is better)
Translates to: TLHAEPWAPWIQRHL*HCEISAKCGVWGGR
Trigger: CCTCCCACCCCACACCCCACACTTGGCTGAGATCTCACAGTGGCAAAGATGTCTTTGAATCCATGGTGCCCAGGGTTCAGCGTGTAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 90 bp ACGGAGCATGGGGTCATCCAGCATGAGTCACTGATGGTCCATATCTaGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCTT +
Preference number: 1 (lower is better)
Translates to: TEHGVIQHESLMVHI*GDCGVCTSPGPLQL
Trigger: AAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGATGACCCCATGCTCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR CCA 90 bp TCACATGAGGGCGCTGTGGAGTCAGGCTCCAAATACAGCAAGCTTTaGGGATGTCCTGCCTTTCACAAGGCAGAGTGGGAAGGGTGGAGA +
Preference number: 1 (lower is better)
Translates to: SHEGAVESGSKYSKL*GCPAFHKAEWEGWR
Trigger: TCTCCACCCTTCCCACTCTGCCTTGTGAAAGGCAGGACATCCCCAAAGCTTGCTGTATTTGGAGCCTGACTCCACAGCGCCCTCATGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 90 bp CCTCTGCTCCTAGATCTGTGGACTCTTAATGAAGTGAGAGGTGGCTaGAGAGCACCATGGTGGACACCCCAGTCAGGGAGAAATGGCTAC +
Preference number: 1 (lower is better)
Translates to: PLLLDLWTLNEVRGG*RAPWWTPQSGRNGY
Trigger: GTAGCCATTTCTCCCTGACTGGGGTGTCCACCATGGTGCTCTGCAGCCACCTCTCACTTCATTAAGAGTCCACAGATCTAGGAGCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 90 bp TTTGGGTCATGGTCTGTGATGGGTCTCTGTCACATGAGGGCGCTGTaGAGTCAGGCTCCAAATACAGCAAGCTTTGGGGATGTCCTGCCT +
Preference number: 1 (lower is better)
Translates to: FGSWSVMGLCHMRAL*SQAPNTASFGDVLP
Trigger: AGGCAGGACATCCCCAAAGCTTGCTGTATTTGGAGCCTGACTCCACAGCGCCCTCATGTGACAGAGACCCATCACAGACCATGACCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 90 bp TCAGAACCTATCATAGGTGAGACCCATCTCCCCCATACTAAGTCCTaGCCCAGCCTGAGCACCACCCTGCCATTCTGGGATTTTCCCAGA +
Preference number: 1 (lower is better)
Translates to: SEPIIGETHLPHTKS*PSLSTTLPFWDFPR
Trigger: TCTGGGAAAATCCCAGAATGGCAGGGTGGTGCTCAGGCTGGGTCAGGACTTAGTATGGGGGAGATGGGTCTCACCTATGATAGGTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 90 bp GAGCATCTGTGTTCTCACATCCTTGCTACACTGCCTCTGTCATCTTaGATCATGCGAGGGGCCACTTATAGACCCTTCTGCCCTGCAGGG +
Preference number: 1 (lower is better)
Translates to: EHLCSHILATLPLSS*IMRGATYRPFCPAG
Trigger: CCCTGCAGGGCAGAAGGGTCTATAAGTGGCCCCTCGCATGATTCAAGATGACAGAGGCAGTGTAGCAAGGATGTGAGAACACAGATGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 90 bp TCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTaGAAACTCAGCCCTCATTACTTACCAGGGTTTTCTGGCCAACCT +
Preference number: 1 (lower is better)
Translates to: SELSPPWHPVHSRPL*KLSPHYLPGFSGQP
Trigger: AGGTTGGCCAGAAAACCCTGGTAAGTAATGAGGGCTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR GCA 90 bp TGCCAGGGACCCTGCCCTGATGTCATGCAGTTCATTGAGAACAGCTaGTGCAGGCACATCAGCAGACATTTACTCCCTGACACTCAACTC +
Preference number: 1 (lower is better)
Translates to: CQGPCPDVMQFIENS*CRHISRHLLPDTQL
Trigger: GAGTTGAGTGTCAGGGAGTAAATGTCTGCTGATGTGCCTGCAGCAGCTGTTCTCAATGAACTGCATGACATCAGGGCAGGGTCCCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 90 bp TGTGTTCTCACATCCTTGCTACACTGCCTCTGTCATCTTGAATCATaGGAGGGGCCACTTATAGACCCTTCTGCCCTGCAGGGCTGTGAG +
Preference number: 1 (lower is better)
Translates to: CVLTSLLHCLCHLES*EGPLIDPSALQGCE
Trigger: CTCACAGCCCTGCAGGGCAGAAGGGTCTATAAGTGGCCCCTCGCATGATTCAAGATGACAGAGGCAGTGTAGCAAGGATGTGAGAACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 90 bp TATTCTGGGCAGGTCACCCACCTGGCACAGTACAGAGTAATCATTTaGGTCATGGTCTGTGATGGGTCTCTGTCACATGAGGGCGCTGTG +
Preference number: 1 (lower is better)
Translates to: YSGQVTHLAQYRVII*VMVCDGSLSHEGAV
Trigger: CACAGCGCCCTCATGTGACAGAGACCCATCACAGACCATGACCCAAATGATTACTCTGTACTGTGCCAGGTGGGTGACCTGCCCAGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 90 bp GGCCAGGAGTGGAAAATTATGGTCTTACTTGGGCTGAAAATAGCATaGGGCATCAGGGCAGGAACTTCACCCACAAGGCAAGTGGCCTGG +
Preference number: 1 (lower is better)
Translates to: GQEWKIMVLLGLKIA*GIRAGTSPTRQVAW
Trigger: CCAGGCCACTTGCCTTGTGGGTGAAGTTCCTGCCCTGATGCCTCATGCTATTTTCAGCCCAAGTAAGACCATAATTTTCCACTCCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 90 bp CAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTaGACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCAC +
Preference number: 1 (lower is better)
Translates to: QHESLMVHIWGDCGV*TSPGPLQLPNINLH
Trigger: GTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR GCA 90 bp CAGGGACCCTGCCCTGATGTCATGCAGTTCATTGAGAACAGCTGCTaGAGGCACATCAGCAGACATTTACTCCCTGACACTCAACTCTCT +
Preference number: 1 (lower is better)
Translates to: QGPCPDVMQFIENSC*RHISRHLLPDTQLS
Trigger: AGAGAGTTGAGTGTCAGGGAGTAAATGTCTGCTGATGTGCCTGCAGCAGCTGTTCTCAATGAACTGCATGACATCAGGGCAGGGTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 90 bp AGGTGGTCTGGGTGGAGCATCTGTGTTCTCACATCCTTGCTACACTaGCTCTGTCATCTTGAATCATGCGAGGGGCCACTTATAGACCCT +
Preference number: 1 (lower is better)
Translates to: RWSGWSICVLTSLLH*LCHLESCEGPLIDP
Trigger: AGGGTCTATAAGTGGCCCCTCGCATGATTCAAGATGACAGAGGCAGTGTAGCAAGGATGTGAGAACACAGATGCTCCACCCAGACCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 90 bp ACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTaGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGAAGTG +
Preference number: 1 (lower is better)
Translates to: TDGPYLGRLWRLHKS*SSTASQYKPAQAEV
Trigger: CACTTCAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR CCA 90 bp AAACAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTaGTTGTGTCTCCCAGGAGTCTCACGTGATGTTTCACAATGGCCT +
Preference number: 1 (lower is better)
Translates to: KQSLGSLPGGKTHSN*LCLPGVSRDVSQWP
Trigger: AGGCCATTGTGAAACATCACGTGAGACTCCTGGGAGACACAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 90 bp CTCTACACACCCCACCTCACTCTACACGCTGAACCCTGGGCACCATaGATTCAAAGACATCTTTGCCACTGTGAGATCTCAGCCAAGTGT +
Preference number: 1 (lower is better)
Translates to: LYTPHLTLHAEPWAP*IQRHLCHCEISAKC
Trigger: ACACTTGGCTGAGATCTCACAGTGGCAAAGATGTCTTTGAATCCATGGTGCCCAGGGTTCAGCGTGTAGAGTGAGGTGGGGTGTGTAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 90 bp AGCTGCTGCTCTGTCACCCTGAGTTCAGTCACAGTCAGCGTGGGCTaGTATAACAAAATGCCACCGACTGGGTGGATTAGAAACAAGAGA +
Preference number: 1 (lower is better)
Translates to: SCCSVTLSSVTVSVG*YNKMPPTGWIRNKR
Trigger: TCTCTTGTTTCTAATCCACCCAGTCGGTGGCATTTTGTTATAGCAGCCCACGCTGACTGTGACTGAACTCAGGGTGACAGAGCAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 90 bp ATTCTGGGATTTTCCCAGAAGGCAGACGATGGACAGGAGGAGGAGTaGATCTCTTTCATATTTACCCCCAGTGCAAAGGAAGCCTCAGGG +
Preference number: 1 (lower is better)
Translates to: ILGFSQKADDGQEEE*ISFIFTPSAKEASG
Trigger: CCCTGAGGCTTCCTTTGCACTGGGGGTAAATATGAAAGAGATTCACTCCTCCTCCTGTCCATCGTCTGCCTTCTGGGAAAATCCCAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 90 bp GTCCTCTCCTTCAAAACATGTATCCCAATGTGGTTACGTACTAAGTaGTGTCAACTCTGTGAGGGCAGGGCCCAGCTGATTTGCCTCCAT +
Preference number: 1 (lower is better)
Translates to: VLSFKTCIPMWLRTK*CQLCEGRAQLICLH
Trigger: ATGGAGGCAAATCAGCTGGGCCCTGCCCTCACAGAGTTGACATCACTTAGTACGTAACCACATTGGGATACATGTTTTGAAGGAGAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 90 bp AGCTTTGGTGACTTGACCTGGAGCAACCATGTGTGGATAACATGTTaGTTAGGGCCTCTTCTAACCTCAGGGGGTGAAAGTGGGAATGTA +
Preference number: 1 (lower is better)
Translates to: SFGDLTWSNHVWITC*LGPLLTSGGESGNV
Trigger: TACATTCCCACTTTCACCCCCTGAGGTTAGAAGAGGCCCTAAGCAACATGTTATCCACACATGGTTGCTCCAGGTCAAGTCACCAAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 90 bp TCCTCCCTGGAACATGTGATCATTCAACACACACATAAACACACGTaGACACACACAGAGACAGCACACACTGTGTGGACTAAGGTGGCA +
Preference number: 1 (lower is better)
Translates to: SSLEHVIIQHTHKHT*THTETAHTVWTKVA
Trigger: TGCCACCTTAGTCCACACAGTGTGTGCTGTCTCTGTGTGTGTGCACGTGTGTTTATGTGTGTGTTGAATGATCACATGTTCCAGGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 90 bp GTGAAGCATCCACCATATAACATAGATGAGAGGGTGCGTGGGACATaGGTCAATACACGACTTCCCTCCCTCATGTGCCTGATTCTAAAC +
Preference number: 1 (lower is better)
Translates to: VKHPPYNIDERVRGT*VNTRLPSLMCLILN
Trigger: GTTTAGAATCAGGCACATGAGGGAGGGAAGTCGTGTATTGACCCATGTCCCACGCACCCTCTCATCTATGTTATATGGTGGATGCTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 90 bp CAGAAGGACATCGGCTACATTAACAGAAGTATAGAACCTAGAAGGTaGGAGGTGAATAGCTCACACTATTCTGGGCAGGTCACCCACCTG +
Preference number: 1 (lower is better)
Translates to: QKDIGYINRSIEPRR*EVNSSHYSGQVTHL
Trigger: CAGGTGGGTGACCTGCCCAGAATAGTGTGAGCTATTCACCTCTCACCTTCTAGGTTCTATACTTCTGTTAATGTAGCCGATGTCCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 90 bp GCCAAATGCGCAGTTTATGGATGGGAAAGGAAAATCACACGTCACTaGGCAGGGAGCATGGGTGGGAGGAAAATCAAACAGTTGCATGTT +
Preference number: 1 (lower is better)
Translates to: AKCAVYGWERKITRH*AGSMGGRKIKQLHV
Trigger: AACATGCAACTGTTTGATTTTCCTCCCACCCATGCTCCCTGCTCAGTGACGTGTGATTTTCCTTTCCCATCCATAAACTGCGCATTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 90 bp ACAACCTTTAGTATAAGTTACAGCCTCACACTGGCTCCTAGCCCATaGGAGCCTCCAGATGGGTCTATGATATTAGTCCCCAGATGTTCA +
Preference number: 1 (lower is better)
Translates to: TTFSISYSLTLAPSP*EPPDGSMILVPRCS
Trigger: TGAACATCTGGGGACTAATATCATAGACCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACTTATACTAAAGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR TCA 90 bp AGTTTAATTCCACGCCAGAGAGGAGGGGACTTTTCATGTGGCTGCTaGTTTGGAATTTGGTTCCAGGACATAAATCTGAGGACACATGGG +
Preference number: 1 (lower is better)
Translates to: SLIPRQRGGDFSCGC*FGIWFQDINLRTHG
Trigger: CCCATGTGTCCTCAGATTTATGTCCTGGAACCAAATTCCAAATCAGCAGCCACATGAAAAGTCCCCTCCTCTCTGGCGTGGAATTAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 90 bp AGAGTCCCAGCAGGAAAGACGTTGCACACTCTAATCAGGTCATTTTaGGATAGCTTAGCGGAGAGACTGTTTTTACAAAGGTGTGGACTG +
Preference number: 1 (lower is better)
Translates to: RVPAGKTLHTLIRSF*DSLAERLFLQRCGL
Trigger: CAGTCCACACCTTTGTAAAAACAGTCTCTCCGCTAAGCTATCCCAAAATGACCTGATTAGAGTGTGCAACGTCTTTCCTGCTGGGACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 90 bp CTGCTGATTTGGAATTTGGTTCCAGGACATAAATCTGAGGACACATaGGGTAAAATAGCCCGCTTTCTAAAGAAACCTGGAAACAACTGG +
Preference number: 1 (lower is better)
Translates to: LLIWNLVPGHKSEDT*GKIARFLKKPGNNW
Trigger: CCAGTTGTTTCCAGGTTTCTTTAGAAAGCGGGCTATTTTACCCCATGTGTCCTCAGATTTATGTCCTGGAACCAAATTCCAAATCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 90 bp GTTTATAGTTTGAATTTGGCCATAAGAGTTTTTGCACCATGGAAATaGGCAGTTCTACAAAGAAGGGGTTCCCAGTTAAATCGGAGCTCC +
Preference number: 1 (lower is better)
Translates to: VYSLNLAIRVFAPWK*AVLQRRGSQLNRSS
Trigger: GGAGCTCCGATTTAACTGGGAACCCCTTCTTTGTAGAACTGCCCATTTCCATGGTGCAAAAACTCTTATGGCCAAATTCAAACTATAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
3UTR CCA 90 bp CATCATGTTTATAGTTTGAATTTGGCCATAAGAGTTTTTGCACCATaGAAATGGGCAGTTCTACAAAGAAGGGGTTCCCAGTTAAATCGG +
Preference number: 1 (lower is better)
Translates to: HHVYSLNLAIRVFAP*KWAVLQRRGSQLNR
Trigger: CCGATTTAACTGGGAACCCCTTCTTTGTAGAACTGCCCATTTCCATGGTGCAAAAACTCTTATGGCCAAATTCAAACTATAAACATGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
3UTR-3UTR CCA 90 bp GGCCGTGGGTGGAGCCCCCAGGGACAGGGGGTGACTGGCCCTGCCTGGCCCATTCCAGTCAGGGAGAAATaGCTACCCTGCTGCCGTGGG +
Preference number: 2 (lower is better)
Translates to: GRGWSPQGQGVTGPAWPIPVREK*LPCCRG
Trigger: CCCACGGCAGCAGGGTAGCCATTTCTCCCTGACTGG...AATGGGCCAGGCAGGGCCAGTCACCCCCTGTCCCTGGGGGCTCCACCCACGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp GGCCGTGGGTGGAGCCCCCAGGGACAGGGGGTGACTGGCCCTGCCTGGCCCATTGGAAAGGCTCAAGGGTaGTTTGTAACAGGCAATCAT +
Preference number: 2 (lower is better)
Translates to: GRGWSPQGQGVTGPAWPIGKAQG*FVTGNH
Trigger: ATGATTGCCTGTTACAAACCACCCTTGAGCCTTTCC...AATGGGCCAGGCAGGGCCAGTCACCCCCTGTCCCTGGGGGCTCCACCCACGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp TGTCCCTGGCCTCAGGTCTATGGCTCCATCCCAGTCACCCTGGGCAGGAAGAGCAGTGGCTCGGGCCTGTaGGAAAGGCTCAAGGGTGGT +
Preference number: 2 (lower is better)
Translates to: CPWPQVYGSIPVTLGRKSSGSGL*ERLKGG
Trigger: ACCACCCTTGAGCCTTTCCCACAGGCCCGAGCCACT...GCTCTTCCTGCCCAGGGTGACTGGGATGGAGCCATAGACCTGAGGCCAGGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CAA 90 bp ACAGGGCGAGGGCTCTCCCAGAGGGAGAGGAGGGAGTCCCTGTCCTaGAGATCAAGAGTGAGGCCTGTCAGCTTTGCCCTGTCCCTTTCC +
Preference number: 2 (lower is better)
Translates to: TGRGLSQRERRESLS*RSRVRPVSFALSLS
Trigger: GGAAAGGGACAGGGCAAAGCTGACAGGCCTCACTCTTGATCTCAAGGACAGGGACTCCCTCCTCTCCCTCTGGGAGAGCCCTCGCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR GCA 90 bp CCTCCCATCCCTGTCCTGTCCCTGGCCTCAGGTCTATGGCTCCATCCCAGTCACATCCCCTCACGTCACTaGTGGACAATGGTCTGGGGC +
Preference number: 2 (lower is better)
Translates to: PPIPVLSLASGLWLHPSHIPSRH*WTMVWG
Trigger: GCCCCAGACCATTGTCCAGCAGTGACGTGAGGGGAT...GTGACTGGGATGGAGCCATAGACCTGAGGCCAGGGACAGGACAGGGATGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp GAGCTCCAGACATCGCACTGTGTGGCTCTGTGTGGCGGCAGTGGGGTCACTTCATCAGAGCTGGGGGCCTaGAGGGTCTTGGAAATGCCC +
Preference number: 2 (lower is better)
Translates to: ELQTSHCVALCGGSGVTSSELGA*RVLEMP
Trigger: GGGCATTTCCAAGACCCTCCAGGCCCCCAGCTCTGA...TGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CAA 90 bp GTGCCTGCCACAGGATTAGATGGTGAACGAGCCCCTCCTGTGTCCTaGTGGAGTGGCTCGGGCCTGTGGGAAAGGCTCAAGGGTGGTTTG +
Preference number: 2 (lower is better)
Translates to: VPATGLDGERAPPVS*WSGSGLWERLKGGL
Trigger: CAAACCACCCTTGAGCCTTTCCCACAGGCCCGAGCCACTCCACAAGGACACAGGAGGGGCTCGTTCACCATCTAATCCTGTGGCAGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR GCA 90 bp TCCAGACATCGCACTGTGTGGCTCTGTGTGGCGGCAGTGGGGTCACTTCACTTCACTGGGTTCCAGAGGTaGCCCTGGTTCACCCAGGGT +
Preference number: 2 (lower is better)
Translates to: SRHRTVWLCVAAVGSLHFTGFQR*PWFTQG
Trigger: ACCCTGGGTGAACCAGGGGCACCTCTGGAACCCAGT...GAAGTGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp TGTCCCTGGCCTCAGGTCTATGGCTCCATCCCAGTCACCCTGGGCAGGAAGAGCGAGCTAAGTCCACCGTaGCACCCAGTCCATTCCAGA +
Preference number: 2 (lower is better)
Translates to: CPWPQVYGSIPVTLGRKSELSPP*HPVHSR
Trigger: TCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTC...GCTCTTCCTGCCCAGGGTGACTGGGATGGAGCCATAGACCTGAGGCCAGGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp CTCACTCCAAGGTCAGAGCATGAGCTGCACCTCTCCACCCACACCACTTGGGCTTCCCTGTCCTGTCCCTaGCCTCAGGTCTATGGCTCC +
Preference number: 2 (lower is better)
Translates to: LTPRSEHELHLSTHTTWASLSCP*PQVYGS
Trigger: GGAGCCATAGACCTGAGGCCAGGGACAGGACAGGGA...AGCCCAAGTGGTGTGGGTGGAGAGGTGCAGCTCATGCTCTGACCTTGGAGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR TCA 90 bp CTGATTTGCCTCCATAGCCCCCGGCCTGGTGCCAGGCATATAAATGCTGACCACAGTCCTGACCCAGCCTaGGCACCACCCTGCCATTCT +
Preference number: 2 (lower is better)
Translates to: LICLHSPRPGARHINADHSPDPA*APPCHS
Trigger: AGAATGGCAGGGTGGTGCTCAGGCTGGGTCAGGACT...GTGGTCAGCATTTATATGCCTGGCACCAGGCCGGGGGCTATGGAGGCAAATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR TCA 90 bp GAGCTCCAGACATCGCACTGTGTGGCTCTGTGTGGCGGCAGTGGGGTCACTTCAAAGAGCTGGGCAGTGTaGGTGACAGCAGGATCGTCA +
Preference number: 2 (lower is better)
Translates to: ELQTSHCVALCGGSGVTSKSWAV*VTAGSS
Trigger: TGACGATCCTGCTGTCACTCACACTGCCCAGCTCTT...TGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR GCA 90 bp GAGCTCCAGACATCGCACTGTGTGGCTCTGTGTGGCGGCAGTGGGGTCACTTCAGATGGGCAACTCACGTaGCCTTTCACAGTGGCCTTC +
Preference number: 2 (lower is better)
Translates to: ELQTSHCVALCGGSGVTSDGQLT*PFTVAF
Trigger: GAAGGCCACTGTGAAAGGGCACGTGAGTTGCCCATC...TGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp CTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCTATCTGGGGAGACTGTaGCGTCTGCACAAGTCCTGG +
Preference number: 2 (lower is better)
Translates to: LGVLLRAKSTVAPSPFQTYLGRL*RLHKSW
Trigger: CCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATA...GGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR-3UTR CCA 90 bp TGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGCCAGCTACTTGCATaGGAGTCAGGCCAGGGGTGT +
Preference number: 2 (lower is better)
Translates to: CSSLGLGVLLRAKSTVAPSQLLA*ESGQGC
Trigger: ACACCCCTGGCCTGACTCCCATGCAAGTAGCTGGCT...GGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR-3UTR CCA 90 bp AGTATAAGTTACAGCCTCACACTGGCTCCTAGCCCATGGGAGCCTCCAGATGGGGGCCAACCTGTGACTTaGCCCCCACCCCAGGTAGCT +
Preference number: 2 (lower is better)
Translates to: SISYSLTLAPSPWEPPDGGQPVT*PPPQVA
Trigger: AGCTACCTGGGGTGGGGGCCAAGTCACAGGTTGGCC...CCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACTTATACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR-3UTR CCA 90 bp CCTCCCATCCCTGTCCTGTCCCTGGCCTCAGGTCTATGGCTCCATCCCAGTCACCAGATGTTCATCTCTTaGGCTGGGGGTACTCCTCAG +
Preference number: 2 (lower is better)
Translates to: PPIPVLSLASGLWLHPSHQMFIS*AGGTPQ
Trigger: CTGAGGAGTACCCCCAGCCCAAGAGATGAACATCTG...GTGACTGGGATGGAGCCATAGACCTGAGGCCAGGGACAGGACAGGGATGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp TGTCCCTGGCCTCAGGTCTATGGCTCCATCCCAGTCACCCTGGGCAGGAAGAGCCCAGAAGGCAGACGATaGACAGGAGGAGGAGTGAAT +
Preference number: 2 (lower is better)
Translates to: CPWPQVYGSIPVTLGRKSPEGRR*TGGGVN
Trigger: ATTCACTCCTCCTCCTGTCCATCGTCTGCCTTCTGG...GCTCTTCCTGCCCAGGGTGACTGGGATGGAGCCATAGACCTGAGGCCAGGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp GGACCCAGAAGAGGAGTGATGAAGGTCCTCACAGCATGGGGGAAGAGGACAGGTCCCTCACGTCACTGCTaGACAATGGTCTGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: GPRRGVMKVLTAWGKRTGPSRHC*TMVWGQ
Trigger: CTGGCCCCAGACCATTGTCCAGCAGTGACGTGAGGG...ACCTGTCCTCTTCCCCCATGCTGTGAGGACCTTCATCACTCCTCTTCTGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp CTCACTCCAAGGTCAGAGCATGAGCTGCACCTCTCCACCCACACCACTTGGGCTCCCATTGTTCCTGGCTaGGACAGGGCTGAGACTGAC +
Preference number: 2 (lower is better)
Translates to: LTPRSEHELHLSTHTTWAPIVPG*DRAETD
Trigger: GTCAGTCTCAGCCCTGTCCCAGCCAGGAACAATGGG...AGCCCAAGTGGTGTGGGTGGAGAGGTGCAGCTCATGCTCTGACCTTGGAGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CAA 90 bp TGGCTCTGTGTGGCGGCAGTGGGGTCACTTCACTTCTCTGGTCACTaGATGCTGGGGAGAAACACTGCCTCCACCCTAGTCCTCAGAGCT +
Preference number: 2 (lower is better)
Translates to: WLCVAAVGSLHFSGH*MLGRNTASTLVLRA
Trigger: AGCTCTGAGGACTAGGGTGGAGGCAGTGTTTCTCCCCAGCATCAAGTGACCAGAGAAGTGAAGTGACCCCACTGCCGCCACACAGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR GCA 90 bp CTCACTCCAAGGTCAGAGCATGAGCTGCACCTCTCCACCCACACCACTTGGGCTGAGGCCTGTCAGCTTTaGCCTGTCCCTTTCCAAAGG +
Preference number: 2 (lower is better)
Translates to: LTPRSEHELHLSTHTTWAEACQL*PVPFQR
Trigger: CCTTTGGAAAGGGACAGGGCAAAGCTGACAGGCCTC...AGCCCAAGTGGTGTGGGTGGAGAGGTGCAGCTCATGCTCTGACCTTGGAGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp AGGTGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCCTGGCTCCTAGCCCATaGGAGCCTCCAGATGGGTCT +
Preference number: 2 (lower is better)
Translates to: RWQKGTDWRKDPCVAGESLAPSP*EPPDGS
Trigger: AGACCCATCTGGAGGCTCCCATGGGCTAGGAGCCAG...GCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
3UTR-3UTR CCA 90 bp GCCAAACAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTTGTTCCAGAGGTGCCCCTaGTTCACCCAGGGTCTCCAG +
Preference number: 2 (lower is better)
Translates to: AKQSLGSLPGGKTHSNWLFQRCP*FTQGLQ
Trigger: CTGGAGACCCTGGGTGAACCAGGGGCACCTCTGGAA...CAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CAA 90 bp AGTCAGCTGTCCAGCCTGCTTATGGCTCATGCACACCCTGCCCTCTaGCCCCATGTCTTTGCCTGGGATGCATCCTGTGTGTGGATGTTC +
Preference number: 2 (lower is better)
Translates to: SQLSSLLMAHAHPAL*PHVFAWDASCVWMF
Trigger: GAACATCCACACACAGGATGCATCCCAGGCAAAGACATGGGGCAAGAGGGCAGGGTGTGCATGAGCCATAAGCAGGCTGGACAGCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR TCA 90 bp CTCACTCCAAGGTCAGAGCATGAGCTGCACCTCTCCACCCACACCACTTGGGCTGCGAGCTCTCTAGCCTaGAGTGGCAAGTTTCTGAAG +
Preference number: 2 (lower is better)
Translates to: LTPRSEHELHLSTHTTWAASSLA*SGKFLK
Trigger: CTTCAGAAACTTGCCACTTCAGGCTAGAGAGCTCGC...AGCCCAAGTGGTGTGGGTGGAGAGGTGCAGCTCATGCTCTGACCTTGGAGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp TGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACGTCTGCACAAGTCCTaGTCCTCTACAGCTTCCCAA +
Preference number: 2 (lower is better)
Translates to: WGYSSELSPPWHPVHSRPRLHKS*SSTASQ
Trigger: TTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACG...TGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR-3UTR CCA 90 bp GCCAAACAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTTGAGCCAGCTACTTGCATaGGAGTCAGGCCAGGGGTGT +
Preference number: 2 (lower is better)
Translates to: AKQSLGSLPGGKTHSNWLSQLLA*ESGQGC
Trigger: ACACCCCTGGCCTGACTCCCATGCAAGTAGCTGGCT...CAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp CTCACTCCAAGGTCAGAGCATGAGCTGCACCTCTCCACCCACACCACTTGGGCTAGCCCAGAGTGGTCCTaGCTAGACTCAGAACCTATC +
Preference number: 2 (lower is better)
Translates to: LTPRSEHELHLSTHTTWASPEWS*LDSEPI
Trigger: GATAGGTTCTGAGTCTAGCCAGGACCACTCTGGGCT...AGCCCAAGTGGTGTGGGTGGAGAGGTGCAGCTCATGCTCTGACCTTGGAGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR TCA 90 bp TGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCTGGGGTCATCCAGCATaGGTCACTGATGGTCCATAT +
Preference number: 2 (lower is better)
Translates to: CSSLGLGVLLRAKSTVAPWGHPA*VTDGPY
Trigger: ATATGGACCATCAGTGACTCATGCTGGATGACCCCA...GGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR-3UTR GCA 90 bp GAGCCTGGAGTCAGCTGTCCAGCCTGCTTATGGCTCATGCACACCCTGCCCTCTCATTCCAGACCACTGTaGAAACTCAGCCCTCATTAC +
Preference number: 2 (lower is better)
Translates to: EPGVSCPACLWLMHTLPSHSRPL*KLSPHY
Trigger: GTAATGAGGGCTGAGTTTGCACAGTGGTCTGGAATG...AGAGGGCAGGGTGTGCATGAGCCATAAGCAGGCTGGACAGCTGACTCCAGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp AGGTGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCTATCTGGGGAGACTGTaGCGTCTGCACAAGTCCTGG +
Preference number: 2 (lower is better)
Translates to: RWQKGTDWRKDPCVAGESYLGRL*RLHKSW
Trigger: CCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATA...GCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
3UTR-3UTR GCA 90 bp TGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCTTCGGAGACTGTGGCGTCTaGACAAGTCCTGGTCCTCTA +
Preference number: 2 (lower is better)
Translates to: WQKGTDWRKDPCVAGESFGDCGV*TSPGPL
Trigger: TAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCC...GAAGCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
3UTR-3UTR GCA 90 bp CCAAACAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTTGTGGAGACTGTGGCGTCTaGACAAGTCCTGGTCCTCTA +
Preference number: 2 (lower is better)
Translates to: PNNPWGPCQEGKLIPTGCGDCGV*TSPGPL
Trigger: TAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCC...ACAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp AGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACTCAGCGTCTGCACAAGTCCTaGTCCTCTACAGCTTCCCAA +
Preference number: 2 (lower is better)
Translates to: RAKSTVAPSPFQTTVQTQRLHKS*SSTASQ
Trigger: TTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACG...CTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR-3UTR CCA 90 bp CACAGAGTGAATATCCTGAGCCCCTGTCAAATGACGGAGCATGGGGTCATCCAGCTGATGGTCCATATCTaGGGAGACTGTGGCGTCTGC +
Preference number: 2 (lower is better)
Translates to: HRVNILSPCQMTEHGVIQLMVHI*GDCGVC
Trigger: GCAGACGCCACAGTCTCCCCAGATATGGACCATCAG...CTGGATGACCCCATGCTCCGTCATTTGACAGGGGCTCAGGATATTCACTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR-3UTR CCA 90 bp AGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCTCCAGCCAGCTACTTGCATaGGAGTCAGGCCAGGGGTGT +
Preference number: 2 (lower is better)
Translates to: RLWYVILVSHLPLWACFSSQLLA*ESGQGC
Trigger: ACACCCCTGGCCTGACTCCCATGCAAGTAGCTGGCT...GGAGAAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR-3UTR CCA 90 bp GCCAAACAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTTGGTTCATCTCTTGGGCTaGGGGTACTCCTCAGAGCTA +
Preference number: 2 (lower is better)
Translates to: AKQSLGSLPGGKTHSNWLVHLLG*GYSSEL
Trigger: TAGCTCTGAGGAGTACCCCCAGCCCAAGAGATGAAC...CAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CAA 90 bp GTTTCTCCATTTGACTTGATTAGGCTGGACTCCAACCTAGGTACCTaGGCAGTACAGCCAGCTACTTGCATGGGAGTCAGGCCAGGGGTG +
Preference number: 2 (lower is better)
Translates to: VSPFDLIRLDSNLGT*AVQPATCMGVRPGV
Trigger: CACCCCTGGCCTGACTCCCATGCAAGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGAGTCCAGCCTAATCAAGTCAAATGGAGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR CAA 90 bp CAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTaGTGTCTCCCAGGAGTCTCACGTGATGTTTCACAATGGCCTTCA +
Preference number: 2 (lower is better)
Translates to: QSLGSLPGGKTHSNW*CLPGVSRDVSQWPS
Trigger: TGAAGGCCATTGTGAAACATCACGTGAGACTCCTGGGAGACACAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR TCA 90 bp GCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACTCAGCCCTTTCTCCATTTGACTTaGTTAGGCTGGACTCCAACC +
Preference number: 2 (lower is better)
Translates to: AKSTVAPSPFQTTVQTQPFLHLT*LGWTPT
Trigger: GGTTGGAGTCCAGCCTAATCAAGTCAAATGGAGAAA...GGGCTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR-3UTR TCA 90 bp GCCAAACAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTTGAGAACCTATCATAGGTaGGACCCATCTCCCCCATAC +
Preference number: 2 (lower is better)
Translates to: AKQSLGSLPGGKTHSNWLRTYHR*DPSPPY
Trigger: GTATGGGGGAGATGGGTCTCACCTATGATAGGTTCT...CAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR TCA 90 bp CACTGGCCAGACACACTGTCCTCTCCTTCAAAACATGTATCCCAATGTGGTTACTGGGTCTCTGTCACATaGGGGCGCTGTGGAGTCAGG +
Preference number: 2 (lower is better)
Translates to: HWPDTLSSPSKHVSQCGYWVSVT*GRCGVR
Trigger: CCTGACTCCACAGCGCCCTCATGTGACAGAGACCCA...GTAACCACATTGGGATACATGTTTTGAAGGAGAGGACAGTGTGTCTGGCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR TCA 90 bp GGGAAGAGGACAGGTGAGCATTCAATTAAGCAGGCGATGGAAATCTTAAACCTGAAGTGGCCTGGGCACTaGGCAGCAAGGTGGGACGTG +
Preference number: 2 (lower is better)
Translates to: GKRTGEHSIKQAMEILNLKWPGH*AARWDV
Trigger: CACGTCCCACCTTGCTGCTCAGTGCCCAGGCCACTT...CAGGTTTAAGATTTCCATCGCCTGCTTAATTGAATGCTCACCTGTCCTCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp AGTTACAGCCTCACACTGGCTCCTAGCCCATGGGAGCCTCCAGATGGGTCTATGCTCAGCTCCAGACTCTaGTATGTGATCTTGGTAAGC +
Preference number: 2 (lower is better)
Translates to: SYSLTLAPSPWEPPDGSMLSSRL*YVILVS
Trigger: GCTTACCAAGATCACATACCAGAGTCTGGAGCTGAG...CATAGACCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR-3UTR TCA 90 bp ACTTGCATGGGAGTCAGGCCAGGGGTGTCATTGACCTTGAGCTCTTGCCTTTCTTGGGGTCATCCAGCATaGGTCACTGATGGTCCATAT +
Preference number: 2 (lower is better)
Translates to: TCMGVRPGVSLTLSSCLSWGHPA*VTDGPY
Trigger: ATATGGACCATCAGTGACTCATGCTGGATGACCCCA...AGAAAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCTGACTCCCATGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR-3UTR TCA 90 bp GGGAGGTGTGAAGGGGGCAGGGAATATTGGAGGGTAATAGGAGATATTTTGAGGCCCTTGTGTGGCTGGTaGAAGCTTCCCTGCCATATC +
Preference number: 2 (lower is better)
Translates to: GRCEGGREYWRVIGDILRPLCGW*KLPCHI
Trigger: GATATGGCAGGGAAGCTTTCACCAGCCACACAAGGG...CCTCAAAATATCTCCTATTACCCTCCAATATTCCCTGCCCCCTTCACACCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR TCA 90 bp GGGAGGTGTGAAGGGGGCAGGGAATATTGGAGGGTAATAGGAGATATTTTGAGGGACTGGGACTGCACCTaGCTTTTCTCTGTGCTCAGC +
Preference number: 2 (lower is better)
Translates to: GRCEGGREYWRVIGDILRDWDCT*LFSVLS
Trigger: GCTGAGCACAGAGAAAAGTCAGGTGCAGTCCCAGTC...CCTCAAAATATCTCCTATTACCCTCCAATATTCCCTGCCCCCTTCACACCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR GCA 90 bp CTGATTTGCCTCCATAGCCCCCGGCCTGGTGCCAGGCATATAAATGCTGACCACGTGTGGATAACATGTTaGTTAGGGCCTCTTCTAACC +
Preference number: 2 (lower is better)
Translates to: LICLHSPRPGARHINADHVWITC*LGPLLT
Trigger: GGTTAGAAGAGGCCCTAAGCAACATGTTATCCACAC...GTGGTCAGCATTTATATGCCTGGCACCAGGCCGGGGGCTATGGAGGCAAATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR GCA 90 bp GGGAAGAGGACAGGTGAGCATTCAATTAAGCAGGCGATGGAAATCTTAAACCTGCCACACCACTTGGGCTaGTATCCCAGGTGCCCATCC +
Preference number: 2 (lower is better)
Translates to: GKRTGEHSIKQAMEILNLPHHLG*YPRCPS
Trigger: GGATGGGCACCTGGGATAGCAGCCCAAGTGGTGTGG...CAGGTTTAAGATTTCCATCGCCTGCTTAATTGAATGCTCACCTGTCCTCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp GGGGACACAAACATTCAGTTCCTAACAGCCACATTTGGTAAAAATGGGACTCAGCAGTGGGGGATGACCTaGGGCCTGGAGAGAGGATCC +
Preference number: 2 (lower is better)
Translates to: GDTNIQFLTATFGKNGTQQWGMT*GLERGS
Trigger: GGATCCTCTCTCCAGGCCCCAGGTCATCCCCCACTG...CTGAGTCCCATTTTTACCAAATGTGGCTGTTAGGAACTGAATGTTTGTGTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp GGGAAGAGGACAGGTGAGCATTCAATTAAGCAGGCGATGGAAATCTTAAACCTGGAGGGAGCCCTAACTTaGCCTCCTTGTGACCCAGCC +
Preference number: 2 (lower is better)
Translates to: GKRTGEHSIKQAMEILNLEGALT*PPCDPA
Trigger: GGCTGGGTCACAAGGAGGCCAAGTTAGGGCTCCCTC...CAGGTTTAAGATTTCCATCGCCTGCTTAATTGAATGCTCACCTGTCCTCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp GATAACCTGGAACAAGTCCTCACTTCTCACGCCCTTCTCCTGTTTCCTCATCTGCACGTCAGCCCAGAGTaGTCCTGGCTAGACTCAGAA +
Preference number: 2 (lower is better)
Translates to: DNLEQVLTSHALLLFPHLHVSPE*SWLDSE
Trigger: TTCTGAGTCTAGCCAGGACCACTCTGGGCTGACGTG...CAGATGAGGAAACAGGAGAAGGGCGTGAGAAGTGAGGACTTGTTCCAGGTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR TCA 90 bp AGTTACAGCCTCACACTGGCTCCTAGCCCATGGGAGCCTCCAGATGGGTCTATGAGCTCTTGCCTTTCTTaGAACTTAATTCCCCCAACT +
Preference number: 2 (lower is better)
Translates to: SYSLTLAPSPWEPPDGSMSSCLS*NLIPPT
Trigger: AGTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAGCT...CATAGACCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR-3UTR CCA 90 bp GGGAAGAGGACAGGTGAGCATTCAATTAAGCAGGCGATGGAAATCTTAAACCTGGTTACAGCCTCACACTaGCTCCTAGCCCATGGGAGC +
Preference number: 2 (lower is better)
Translates to: GKRTGEHSIKQAMEILNLVTASH*LLAHGS
Trigger: GCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAAC...CAGGTTTAAGATTTCCATCGCCTGCTTAATTGAATGCTCACCTGTCCTCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp CTGCTGATTTGGAATTTGGTTCCAGGACATAAATCTGAGGACACATGGGGTAAACCTCCTGTGTCCTTGTaGAGTGGCTCGGGCCTGTGG +
Preference number: 2 (lower is better)
Translates to: LLIWNLVPGHKSEDTWGKPPVSL*SGSGLW
Trigger: CCACAGGCCCGAGCCACTCCACAAGGACACAGGAGG...TTTACCCCATGTGTCCTCAGATTTATGTCCTGGAACCAAATTCCAAATCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR TCA 90 bp TCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAATATACACACAAACGATaGCTAGGGGTTATGGGAACA +
Preference number: 2 (lower is better)
Translates to: SSELSPPWHPVHSRPLCKYTHKR*LGVMGT
Trigger: TGTTCCCATAACCCCTAGTCATCGTTTGTGTGTATA...TTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR-3UTR CCA 90 bp AGCATGGGTGGGAGGAAAATCAAACAGTTGCATGTTTGTGCCTCACTGCATTGTGGTCTGCTCAGTGGATaGGCAACTCACGTGCCCTTT +
Preference number: 2 (lower is better)
Translates to: SMGGRKIKQLHVCASLHCGLLSG*ATHVPF
Trigger: AAAGGGCACGTGAGTTGCCCATCCACTGAGCAGACC...ACAATGCAGTGAGGCACAAACATGCAACTGTTTGATTTTCCTCCCACCCATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CAA 90 bp CTGAGCAGGGAGCATGGGTGGGAGGAAAATCAAACAGTTGCATGTTaGTGCCTCACTGCATTGTCTCTGTCTAGTAAACCGGGAAAAGAG +
Preference number: 2 (lower is better)
Translates to: LSREHGWEENQTVAC*CLTALSLSSKPGKE
Trigger: CTCTTTTCCCGGTTTACTAGACAGAGACAATGCAGTGAGGCACAAACATGCAACTGTTTGATTTTCCTCCCACCCATGCTCCCTGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR TCA 90 bp ATCTGTGTTCTCACATCCTTGCTACACTGCCTCTGTCATCTTGAATCATGCGAGTCACAGTGGCCTTCATaGGTCAACAGCCCAGGAAGT +
Preference number: 2 (lower is better)
Translates to: ICVLTSLLHCLCHLESCESQWPS*VNSPGS
Trigger: ACTTCCTGGGCTGTTGACTCATGAAGGCCACTGTGA...CTCGCATGATTCAAGATGACAGAGGCAGTGTAGCAAGGATGTGAGAACACAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR GCA 90 bp AGCATGGGTGGGAGGAAAATCAAACAGTTGCATGTTTGTGCCTCACTGCATTGTGCTTTGGGGATGTCCTaGCTTTCACAAGGCAGAGTG +
Preference number: 2 (lower is better)
Translates to: SMGGRKIKQLHVCASLHCALGMS*LSQGRV
Trigger: CACTCTGCCTTGTGAAAGGCAGGACATCCCCAAAGC...ACAATGCAGTGAGGCACAAACATGCAACTGTTTGATTTTCCTCCCACCCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR GCA 90 bp CTGCTGATTTGGAATTTGGTTCCAGGACATAAATCTGAGGACACATGGGGTAAACGTCACCAAGGCACTTaGTTACATCCAGGCGCCACG +
Preference number: 2 (lower is better)
Translates to: LLIWNLVPGHKSEDTWGKRHQGT*LHPGAT
Trigger: CGTGGCGCCTGGATGTAAGCAAGTGCCTTGGTGACG...TTTACCCCATGTGTCCTCAGATTTATGTCCTGGAACCAAATTCCAAATCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp GGGGACACAAACATTCAGTTCCTAACAGCCACATTTGGTAAAAATGGGACTCAGAGTGGGAATGTACCCTaGGGTTCCTCCATCCCTCCT +
Preference number: 2 (lower is better)
Translates to: GDTNIQFLTATFGKNGTQSGNVP*GSSIPP
Trigger: AGGAGGGATGGAGGAACCCCAGGGTACATTCCCACT...CTGAGTCCCATTTTTACCAAATGTGGCTGTTAGGAACTGAATGTTTGTGTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp CCAAACAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTTGTCTGCTCCTAGATCTGTaGACTCTTAATGAAGTGAGA +
Preference number: 2 (lower is better)
Translates to: PNNPWGPCQEGKLIPTGCLLLDL*TLNEVR
Trigger: TCTCACTTCATTAAGAGTCCACAGATCTAGGAGCAG...ACAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CAA 90 bp GGGAGTCAGGCCAGGGGTGTCATTGACCTTGAGCTCTTGCCTTTCTaGAAACTTAATTCCCCCAACTTATACACACAAACGATGACTAGG +
Preference number: 2 (lower is better)
Translates to: GSQARGVIDLELLPF*KLNSPNLYTQTMTR
Trigger: CCTAGTCATCGTTTGTGTGTATAAGTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCTGACTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR-3UTR GCA 90 bp GGGGACACAAACATTCAGTTCCTAACAGCCACATTTGGTAAAAATGGGACTCAGAATCCCTGGGGTCCCTaGCAGGAGGGAAAACTCATT +
Preference number: 2 (lower is better)
Translates to: GDTNIQFLTATFGKNGTQNPWGP*QEGKLI
Trigger: AATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATT...CTGAGTCCCATTTTTACCAAATGTGGCTGTTAGGAACTGAATGTTTGTGTCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CCA 90 bp GATAACCTGGAACAAGTCCTCACTTCTCACGCCCTTCTCCTGTTTCCTCATCTGGTCTGGGGCCAGGAGTaGAAAATTATGGTCTTACTT +
Preference number: 2 (lower is better)
Translates to: DNLEQVLTSHALLLFPHLVWGQE*KIMVLL
Trigger: AAGTAAGACCATAATTTTCCACTCCTGGCCCCAGAC...CAGATGAGGAAACAGGAGAAGGGCGTGAGAAGTGAGGACTTGTTCCAGGTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CAA 90 bp TACTTGCATGGGAGTCAGGCCAGGGGTGTCATTGACCTTGAGCTCTaGCCTTTCTTGAAACTTAATTCCCCCAACTTATACACACAAACG +
Preference number: 2 (lower is better)
Translates to: YLHGSQARGVIDLEL*PFLKLNSPNLYTQT
Trigger: CGTTTGTGTGTATAAGTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCTGACTCCCATGCAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR-3UTR TCA 90 bp ACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCTCCATTATACACACAAACGATaGCTAGGGGTTATGGGAACA +
Preference number: 2 (lower is better)
Translates to: TLVCDLGKPPSSLGLFLHYTHKR*LGVMGT
Trigger: TGTTCCCATAACCCCTAGTCATCGTTTGTGTGTATA...ATGGAGAAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR CCA 72 bp GGGCCAGGCAGTCCAACTGGGTTCCAGAGGTGCCCCTaGTTCACCCAGGGTCTCCAGTATCCACCCCCACCT +
Preference number: 3 (lower is better)
Translates to: GPGSPTGFQRCP*FTQGLQYPPPP
Trigger: AGGTGGGGGTGGATACTGGAGACCCTGGGTGAACCAGGGGCACCTCTGGAACCCAGTTGGACTGCCTGGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CAA 90 bp CCTCCCATCCCTGTCCTGTCCCTGGCCTCAGGTCTATGGCTCCATCCCAGTCACTGGCCAACCTGTGACTaGGCCCCCACCCCAGGTAGC +
Preference number: 3 (lower is better)
Translates to: PPIPVLSLASGLWLHPSHWPTCD*APTPGS
Trigger: GCTACCTGGGGTGGGGGCCAAGTCACAGGTTGGCCA...GTGACTGGGATGGAGCCATAGACCTGAGGCCAGGGACAGGACAGGGATGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp ACCAAGGGGCCAGGCAGTCCAACTGGGTTCCAGAGGTaGCCCTGGTTCACCCAGGGTCTCCAGTATCCACCC +
Preference number: 3 (lower is better)
Translates to: TKGPGSPTGFQR*PWFTQGLQYPP
Trigger: GGGTGGATACTGGAGACCCTGGGTGAACCAGGGGCACCTCTGGAACCCAGTTGGACTGCCTGGCCCCTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp GTCTGGTCACTCCTGGCCAAGCCCCACCCTCCACCTTaGAGGAGGCAGGAGCTCCAGACATCGCACTGTGTG +
Preference number: 3 (lower is better)
Translates to: VWSLLAKPHPPP*RRQELQTSHCV
Trigger: CACACAGTGCGATGTCTGGAGCTCCTGCCTCCTGCAAGGTGGAGGGTGGGGCTTGGCCAGGAGTGACCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp GTGGGACGTGCATACCAAGGGGCCAGGCAGTCCAACTaGGTTCCAGAGGTGCCCCTGGTTCACCCAGGGTCT +
Preference number: 3 (lower is better)
Translates to: VGRAYQGARQSN*VPEVPLVHPGS
Trigger: AGACCCTGGGTGAACCAGGGGCACCTCTGGAACCCAGTTGGACTGCCTGGCCCCTTGGTATGCACGTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp CCTCCCATCCCTGTCCTGTCCCTGGCCTCAGGTCTATaGCTCCATCCCAGTCACCCTGGGCAGGAAGAGCTG +
Preference number: 3 (lower is better)
Translates to: PPIPVLSLASGL*LHPSHPGQEEL
Trigger: CAGCTCTTCCTGCCCAGGGTGACTGGGATGGAGCCATAGACCTGAGGCCAGGGACAGGACAGGGATGGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp TCCTCCCACACCCCACGGGGGTTCCCTGGAGACGTATaGCCCACTGTTGCTCACTGGCCAGACACACTGTCC +
Preference number: 3 (lower is better)
Translates to: SSHTPRGFPGDV*PTVAHWPDTLS
Trigger: GGACAGTGTGTCTGGCCAGTGAGCAACAGTGGGCCATACGTCTCCAGGGAACCCCCGTGGGGTGTGGGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp CAGAGCACCATGGTGGACACCCCAGTCAGGGAGAAATaGCTACCCTGCTGCCGTGGGAGGGTGCGAGCTCTC +
Preference number: 3 (lower is better)
Translates to: QSTMVDTPVREK*LPCCRGRVRAL
Trigger: GAGAGCTCGCACCCTCCCACGGCAGCAGGGTAGCCATTTCTCCCTGACTGGGGTGTCCACCATGGTGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CAA 90 bp TGTCCCTGGCCTCAGGTCTATGGCTCCATCCCAGTCACCCTGGGCAGGAAGAGCGCACACCCTGCCCTCTaGCCCCATGTCTTTGCCTGG +
Preference number: 3 (lower is better)
Translates to: CPWPQVYGSIPVTLGRKSAHPAL*PHVFAW
Trigger: CCAGGCAAAGACATGGGGCAAGAGGGCAGGGTGTGC...GCTCTTCCTGCCCAGGGTGACTGGGATGGAGCCATAGACCTGAGGCCAGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 72 bp GGCACTTGCTTACATCCAGGCGCCACGCTGACCTGCTaGATGACCTTGGGCTCAGCCCTGCCCATCTCTGGC +
Preference number: 3 (lower is better)
Translates to: GTCLHPGATLTC*MTLGSALPISG
Trigger: GCCAGAGATGGGCAGGGCTGAGCCCAAGGTCATTCAGCAGGTCAGCGTGGCGCCTGGATGTAAGCAAGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 72 bp CTAAGTGATGTCAACTCTGTGAGGGCAGGGCCCAGCTaGTTTGCCTCCATAGCCCCCGGCCTGGTGCCAGGC +
Preference number: 3 (lower is better)
Translates to: LSDVNSVRAGPS*FASIAPGLVPG
Trigger: GCCTGGCACCAGGCCGGGGGCTATGGAGGCAAATCAGCTGGGCCCTGCCCTCACAGAGTTGACATCACTTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CAA 90 bp AGTTACAGCCTCACACTGGCTCCTAGCCCATGGGAGCCTCCAGATGGGTCTATGTGGCCAACCTGTGACTaGGCCCCCACCCCAGGTAGC +
Preference number: 3 (lower is better)
Translates to: SYSLTLAPSPWEPPDGSMWPTCD*APTPGS
Trigger: GCTACCTGGGGTGGGGGCCAAGTCACAGGTTGGCCA...CATAGACCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR TCA 72 bp TCCACCCCCACCTGTGCCTGCCACAGGATTAGATGGTaGACGAGCCCCTCCTGTGTCCTTGTGGAGTGGCTC +
Preference number: 3 (lower is better)
Translates to: STPTCACHRIRW*TSPSCVLVEWL
Trigger: GAGCCACTCCACAAGGACACAGGAGGGGCTCGTTCACCATCTAATCCTGTGGCAGGCACAGGTGGGGGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 72 bp CAGGAACTTCACCCACAAGGCAAGTGGCCTGGGCACTaGGCAGCAAGGTGGGACGTGCATACCAAGGGGCCA +
Preference number: 3 (lower is better)
Translates to: QELHPQGKWPGH*AARWDVHTKGP
Trigger: TGGCCCCTTGGTATGCACGTCCCACCTTGCTGCTCAGTGCCCAGGCCACTTGCCTTGTGGGTGAAGTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp CCCTGCCCATCTCTGGCCTTGAGTCTGCAGCTGGGCTaGATAATCCCTGGGGTCTGCTCAGTGGATGGGCAA +
Preference number: 3 (lower is better)
Translates to: PCPSLALSLQLG*IIPGVCSVDGQ
Trigger: TTGCCCATCCACTGAGCAGACCCCAGGGATTATCCAGCCCAGCTGCAGACTCAAGGCCAGAGATGGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp CCCGGGGAGCAGCTGTTGGTTGTGCCTTCACTGAGGTaGGGAAATTGGAACAGGGGAACAGGTCTCCAGGCC +
Preference number: 3 (lower is better)
Translates to: PGEQLLVVPSLR*GNWNRGTGLQA
Trigger: GGCCTGGAGACCTGTTCCCCTGTTCCAATTTCCCCACCTCAGTGAAGGCACAACCAACAGCTGCTCCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp CTTGCAGGAGGCAGGAGCTCCAGACATCGCACTGTGTaGCTCTGTGTGGCGGCAGTGGGGTCACTTCACTTC +
Preference number: 3 (lower is better)
Translates to: LAGGRSSRHRTV*LCVAAVGSLHF
Trigger: GAAGTGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGAGCTCCTGCCTCCTGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 72 bp ACCCTGCTGCCGTGGGAGGGTGCGAGCTCTCTAGCCTaGAGTGGCAAGTTTCTGAAGCTTGCTACTAGGGGC +
Preference number: 3 (lower is better)
Translates to: TLLPWEGASSLA*SGKFLKLATRG
Trigger: GCCCCTAGTAGCAAGCTTCAGAAACTTGCCACTTCAGGCTAGAGAGCTCGCACCCTCCCACGGCAGCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 72 bp TGCTATCCCAGGTGCCCATCCCAGGAAGCTCAGTGGTaGGCTCTCACCACTGTAGCTCCAGTCCAGGAGCCA +
Preference number: 3 (lower is better)
Translates to: CYPRCPSQEAQW*ALTTVAPVQEP
Trigger: TGGCTCCTGGACTGGAGCTACAGTGGTGAGAGCTCACCACTGAGCTTCCTGGGATGGGCACCTGGGATAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp CCTGTCCTTGAGATCAAGAGTGAGGCCTGTCAGCTTTaGCCTGTCCCTTTCCAAAGGCTAGGGCGGGGCCCT +
Preference number: 3 (lower is better)
Translates to: PVLEIKSEACQL*PVPFQRLGRGP
Trigger: AGGGCCCCGCCCTAGCCTTTGGAAAGGGACAGGGCAAAGCTGACAGGCCTCACTCTTGATCTCAAGGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp CCCACGGGGGTTCCCTGGAGACGTATGGCCCACTGTTaGTCACTGGCCAGACACACTGTCCTCTCCTTCAAA +
Preference number: 3 (lower is better)
Translates to: PTGVPWRRMAHC*SLARHTVLSFK
Trigger: TTTGAAGGAGAGGACAGTGTGTCTGGCCAGTGAGCAACAGTGGGCCATACGTCTCCAGGGAACCCCCGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp TGCCTTGAGCCTGGAGTCAGCTGTCCAGCCTGCTTATaGCTCATGCACACCCTGCCCTCTTGCCCCATGTCT +
Preference number: 3 (lower is better)
Translates to: CLEPGVSCPACL*LMHTLPSCPMS
Trigger: AGACATGGGGCAAGAGGGCAGGGTGTGCATGAGCCATAAGCAGGCTGGACAGCTGACTCCAGGCTCAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp GGATTAGATGGTGAACGAGCCCCTCCTGTGTCCTTGTaGAGTGGCTCGGGCCTGTGGGAAAGGCTCAAGGGT +
Preference number: 3 (lower is better)
Translates to: GLDGERAPPVSL*SGSGLWERLKG
Trigger: ACCCTTGAGCCTTTCCCACAGGCCCGAGCCACTCCACAAGGACACAGGAGGGGCTCGTTCACCATCTAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp GCAGGAGCTCCAGACATCGCACTGTGTGGCTCTGTGTaGCGGCAGTGGGGTCACTTCACTTCTCTGGTCACT +
Preference number: 3 (lower is better)
Translates to: AGAPDIALCGSV*RQWGHFTSLVT
Trigger: AGTGACCAGAGAAGTGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGAGCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp GAGGCAAGCCCAGGAATTCCCCCATTGGAGGAGGAGTaGCCAGGCAGAGCCAAGTCCTATCGAAGATGGGGA +
Preference number: 3 (lower is better)
Translates to: EASPGIPPLEEE*PGRAKSYRRWG
Trigger: TCCCCATCTTCGATAGGACTTGGCTCTGCCTGGCCACTCCTCCTCCAATGGGGGAATTCCTGGGCTTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CAA 90 bp GAGCCTGGAGTCAGCTGTCCAGCCTGCTTATGGCTCATGCACACCCTGCCCTCTCCAGATGTTCATCTCTaGGGCTGGGGGTACTCCTCA +
Preference number: 3 (lower is better)
Translates to: EPGVSCPACLWLMHTLPSPDVHL*GWGYSS
Trigger: TGAGGAGTACCCCCAGCCCAAGAGATGAACATCTGG...AGAGGGCAGGGTGTGCATGAGCCATAAGCAGGCTGGACAGCTGACTCCAGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CAA 90 bp CTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAACCTAGGTACCTaGGCAGTACAGCCAGCTACT +
Preference number: 3 (lower is better)
Translates to: LLGWGYSSELSPPWHPVHSNLGT*AVQPAT
Trigger: AGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGA...ATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR-3UTR CAA 90 bp GGACCCAGAAGAGGAGTGATGAAGGTCCTCACAGCATGGGGGAAGAGGACAGGTGCAAAAACTCCCCATTaGCTGCCTGCCCTTGCCCAG +
Preference number: 3 (lower is better)
Translates to: GPRRGVMKVLTAWGKRTGAKTPH*LPALAQ
Trigger: CTGGGCAAGGGCAGGCAGCAAATGGGGAGTTTTTGC...ACCTGTCCTCTTCCCCCATGCTGTGAGGACCTTCATCACTCCTCTTCTGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp ACACCCTGCCCTCTTGCCCCATGTCTTTGCCTGGGATaGATCCTGTGTGTGGATGTTCTTCCGGTGAGCTGC +
Preference number: 3 (lower is better)
Translates to: TPCPLAPCLCLG*ILCVDVLPVSC
Trigger: GCAGCTCACCGGAAGAACATCCACACACAGGATGCATCCCAGGCAAAGACATGGGGCAAGAGGGCAGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp GGCTCATGCACACCCTGCCCTCTTGCCCCATGTCTTTaGCTGGGATGCATCCTGTGTGTGGATGTTCTTCCG +
Preference number: 3 (lower is better)
Translates to: GSCTPCPLAPCL*LGCILCVDVLP
Trigger: CGGAAGAACATCCACACACAGGATGCATCCCAGGCAAAGACATGGGGCAAGAGGGCAGGGTGTGCATGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp CCAGCCTGCTTATGGCTCATGCACACCCTGCCCTCTTaGCCCATGTCTTTGCCTGGGATGCATCCTGTGTGT +
Preference number: 3 (lower is better)
Translates to: PACLWLMHTLPS*PMSLPGMHPVC
Trigger: ACACACAGGATGCATCCCAGGCAAAGACATGGGGCAAGAGGGCAGGGTGTGCATGAGCCATAAGCAGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp ATCCCTGGGGTCTGCTCAGTGGATGGGCAACTCACGTaGCCTTTCACAGTGGCCTTCATGAGTCAACAGCCC +
Preference number: 3 (lower is better)
Translates to: IPGVCSVDGQLT*PFTVAFMSQQP
Trigger: GGGCTGTTGACTCATGAAGGCCACTGTGAAAGGGCACGTGAGTTGCCCATCCACTGAGCAGACCCCAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp AAACAGCACAGGCCCATGGTCCTGAAATCCACCTACTaGCAAGCAGGGCAGAGGTGGTCCCACACATTCCCC +
Preference number: 3 (lower is better)
Translates to: KQHRPMVLKSTY*QAGQRWSHTFP
Trigger: GGGGAATGTGTGGGACCACCTCTGCCCTGCTTGGCAGTAGGTGGATTTCAGGACCATGGGCCTGTGCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp CTCAGGTCACACAGCAAAAACTCCCCATTTGCTGCCTaGCCTTGCCCAGCTCCAGACCAGTCCTCTGCTCCT +
Preference number: 3 (lower is better)
Translates to: LRSHSKNSPFAA*PCPAPDQSSAP
Trigger: AGGAGCAGAGGACTGGTCTGGAGCTGGGCAAGGGCAGGCAGCAAATGGGGAGTTTTTGCTGTGTGACCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp TTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTaGCACCCAGTCCATTCCAGACCACTGTGCAAACTC +
Preference number: 3 (lower is better)
Translates to: LGWGYSSELSPP*HPVHSRPLCKL
Trigger: GAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR CCA 72 bp ATCAGGGCAGGAACTTCACCCACAAGGCAAGTGGCCTaGGCACTGAGCAGCAAGGTGGGACGTGCATACCAA +
Preference number: 3 (lower is better)
Translates to: IRAGTSPTRQVA*ALSSKVGRAYQ
Trigger: TTGGTATGCACGTCCCACCTTGCTGCTCAGTGCCCAGGCCACTTGCCTTGTGGGTGAAGTTCCTGCCCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp GCTGGGCTGGATAATCCCTGGGGTCTGCTCAGTGGATaGGCAACTCACGTGCCCTTTCACAGTGGCCTTCAT +
Preference number: 3 (lower is better)
Translates to: AGLDNPWGLLSG*ATHVPFHSGLH
Trigger: ATGAAGGCCACTGTGAAAGGGCACGTGAGTTGCCCATCCACTGAGCAGACCCCAGGGATTATCCAGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp GCTCTGTGTGGCGGCAGTGGGGTCACTTCACTTCTCTaGTCACTTGATGCTGGGGAGAAACACTGCCTCCAC +
Preference number: 3 (lower is better)
Translates to: ALCGGSGVTSLL*SLDAGEKHCLH
Trigger: GTGGAGGCAGTGTTTCTCCCCAGCATCAAGTGACCAGAGAAGTGAAGTGACCCCACTGCCGCCACACAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 72 bp GGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTaGAAGCTTCCCTGCCATATCCTCATCCCCCGACCA +
Preference number: 3 (lower is better)
Translates to: GNGLEKGPLCGW*KLPCHILIPRP
Trigger: TGGTCGGGGGATGAGGATATGGCAGGGAAGCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
3UTR TCA 72 bp GGGGCCACTTATAGACCCTTCTGCCCTGCAGGGCTGTaGGTGTCGTGGGGCACTATAAAGGGCATGATTCTG +
Preference number: 3 (lower is better)
Translates to: GATYRPFCPAGL*VSWGTIKGMIL
Trigger: CAGAATCATGCCCTTTATAGTGCCCCACGACACTCACAGCCCTGCAGGGCAGAAGGGTCTATAAGTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 72 bp TCACAATGGCCTTCAGGAGTTAAGAGCCCCAGGAAATaGCATCAGGGTGGGGAGGTAAGGAGCAGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: SQWPSGVKSPRK*HQGGEVRSRAR
Trigger: CCTGGCCCTGCTCCTTACCTCCCCACCCTGATGTCATTTCCTGGGGCTCTTAACTCCTGAAGGCCATTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp TCAGGGAGAAATGGCTACCCTGCTGCCGTGGGAGGGTaGGAGCTCTCTAGCCTGAAGTGGCAAGTTTCTGAA +
Preference number: 3 (lower is better)
Translates to: SGRNGYPAAVGG*ELSSLKWQVSE
Trigger: TTCAGAAACTTGCCACTTCAGGCTAGAGAGCTCGCACCCTCCCACGGCAGCAGGGTAGCCATTTCTCCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp GGGGTCATCCAGCATGAGTCACTGATGGTCCATATCTaGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCT +
Preference number: 3 (lower is better)
Translates to: GVIQHESLMVHI*GDCGVCTSPGP
Trigger: AGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGATGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR CCA 72 bp TGGGCCACCAGTCCCACTAAGCAGCCAAACAATCCCTaGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACT +
Preference number: 3 (lower is better)
Translates to: WATSPTKQPNNP*GPCQEGKLIPT
Trigger: AGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGGCTGCTTAGTGGGACTGGTGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CAA 90 bp AGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACTCAGAGGCCAGGGGTGTCATaGACCTTGAGCTCTTGCCTT +
Preference number: 3 (lower is better)
Translates to: RAKSTVAPSPFQTTVQTQRPGVS*TLSSCL
Trigger: AAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCT...CTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR-3UTR CAA 90 bp AGTATAAGTTACAGCCTCACACTGGCTCCTAGCCCATGGGAGCCTCCAGATGGGCCAGATGTTCATCTCTaGGGCTGGGGGTACTCCTCA +
Preference number: 3 (lower is better)
Translates to: SISYSLTLAPSPWEPPDGPDVHL*GWGYSS
Trigger: TGAGGAGTACCCCCAGCCCAAGAGATGAACATCTGG...CCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACTTATACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR-3UTR CAA 90 bp AGCATGGGTGGGAGGAAAATCAAACAGTTGCATGTTTGTGCCTCACTGCATTGTGGGGCCTGGAGGGTCTaGGAAATGCCCGGGGAGCAG +
Preference number: 3 (lower is better)
Translates to: SMGGRKIKQLHVCASLHCGAWRV*EMPGEQ
Trigger: CTGCTCCCCGGGCATTTCCAAGACCCTCCAGGCCCC...ACAATGCAGTGAGGCACAAACATGCAACTGTTTGATTTTCCTCCCACCCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 72 bp ATCATAGGTGAGACCCATCTCCCCCATACTAAGTCCTaGCCCAGCCTGAGCACCACCCTGCCATTCTGGGAT +
Preference number: 3 (lower is better)
Translates to: IIGETHLPHTKS*PSLSTTLPFWD
Trigger: ATCCCAGAATGGCAGGGTGGTGCTCAGGCTGGGTCAGGACTTAGTATGGGGGAGATGGGTCTCACCTATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 72 bp GGACAAGGTTCTGTAAACAGCACAGGCCCATGGTCCTaGAATCCACCTACTGCCAAGCAGGGCAGAGGTGGT +
Preference number: 3 (lower is better)
Translates to: GQGSVNSTGPWS*NPPTAKQGRGG
Trigger: ACCACCTCTGCCCTGCTTGGCAGTAGGTGGATTTCAGGACCATGGGCCTGTGCTGTTTACAGAACCTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp GTCAGGCTCCAAATACAGCAAGCTTTGGGGATGTCCTaGCTTTCACAAGGCAGAGTGGGAAGGGTGGAGAGG +
Preference number: 3 (lower is better)
Translates to: VRLQIQQALGMS*LSQGRVGRVER
Trigger: CCTCTCCACCCTTCCCACTCTGCCTTGTGAAAGGCAGGACATCCCCAAAGCTTGCTGTATTTGGAGCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp CTTAATGAAGTGAGAGGTGGCTGCAGAGCACCATGGTaGACACCCCAGTCAGGGAGAAATGGCTACCCTGCT +
Preference number: 3 (lower is better)
Translates to: LNEVRGGCRAPW*TPQSGRNGYPA
Trigger: AGCAGGGTAGCCATTTCTCCCTGACTGGGGTGTCCACCATGGTGCTCTGCAGCCACCTCTCACTTCATTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp GCCCAGCTCCAGACCAGTCCTCTGCTCCTAGATCTGTaGACTCTTAATGAAGTGAGAGGTGGCTGCAGAGCA +
Preference number: 3 (lower is better)
Translates to: AQLQTSPLLLDL*TLNEVRGGCRA
Trigger: TGCTCTGCAGCCACCTCTCACTTCATTAAGAGTCCACAGATCTAGGAGCAGAGGACTGGTCTGGAGCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CAA 90 bp AGTATAAGTTACAGCCTCACACTGGCTCCTAGCCCATGGGAGCCTCCAGATGGGGGGTTATGGGAACAGTaGACTCTGGACCACAGAGTG +
Preference number: 3 (lower is better)
Translates to: SISYSLTLAPSPWEPPDGGLWEQ*TLDHRV
Trigger: CACTCTGTGGTCCAGAGTCAACTGTTCCCATAACCC...CCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACTTATACT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR GCA 72 bp CTAGATCTGTGGACTCTTAATGAAGTGAGAGGTGGCTaGAGAGCACCATGGTGGACACCCCAGTCAGGGAGA +
Preference number: 3 (lower is better)
Translates to: LDLWTLNEVRGG*RAPWWTPQSGR
Trigger: TCTCCCTGACTGGGGTGTCCACCATGGTGCTCTGCAGCCACCTCTCACTTCATTAAGAGTCCACAGATCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp AGTCCCACTAAGCAGCCAAACAATCCCTGGGGTCCCTaGCAGGAGGGAAAACTCATTCCAACTGGTTGTGTC +
Preference number: 3 (lower is better)
Translates to: SPTKQPNNPWGP*QEGKLIPTGCV
Trigger: GACACAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGGCTGCTTAGTGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp CCATTCTGTAAGGGCACTAAACCCATTCATGAGGGCTaGACCCTTAGGACCTGGTTACTTCCCAAAGGCCCC +
Preference number: 3 (lower is better)
Translates to: PFCKGTKPIHEG*TLRTWLLPKGP
Trigger: GGGGCCTTTGGGAAGTAACCAGGTCCTAAGGGTGCAGCCCTCATGAATGGGTTTAGTGCCCTTACAGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp CTCACCATTCTGAAGACTGGAAGTCTAAGATCGGGGTaGCAGCATGGTTGGGATCTGGTGAGGGACCTCTTC +
Preference number: 3 (lower is better)
Translates to: LTILKTGSLRSG*QHGWDLVRDLF
Trigger: GAAGAGGTCCCTCACCAGATCCCAACCATGCTGGCACCCCGATCTTAGACTTCCAGTCTTCAGAATGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp GCTGAACCCTGGGCACCATGGATTCAAAGACATCTTTaGCACTGTGAGATCTCAGCCAAGTGTGGGGTGTGG +
Preference number: 3 (lower is better)
Translates to: AEPWAPWIQRHL*HCEISAKCGVW
Trigger: CCACACCCCACACTTGGCTGAGATCTCACAGTGGCAAAGATGTCTTTGAATCCATGGTGCCCAGGGTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp TGGTCTGTGATGGGTCTCTGTCACATGAGGGCGCTGTaGAGTCAGGCTCCAAATACAGCAAGCTTTGGGGAT +
Preference number: 3 (lower is better)
Translates to: WSVMGLCHMRAL*SQAPNTASFGD
Trigger: ATCCCCAAAGCTTGCTGTATTTGGAGCCTGACTCCACAGCGCCCTCATGTGACAGAGACCCATCACAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp GGGTTCCCTGGAGACGTATGGCCCACTGTTGCTCACTaGCCAGACACACTGTCCTCTCCTTCAAAACATGTA +
Preference number: 3 (lower is better)
Translates to: GFPGDVWPTVAH*PDTLSSPSKHV
Trigger: TACATGTTTTGAAGGAGAGGACAGTGTGTCTGGCCAGTGAGCAACAGTGGGCCATACGTCTCCAGGGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp CTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTaGTTGTGTCTCCCAGGAGTCTCACGTGATGTTTCA +
Preference number: 3 (lower is better)
Translates to: LGSLPGGKTHSN*LCLPGVSRDVS
Trigger: TGAAACATCACGTGAGACTCCTGGGAGACACAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CAA 90 bp TGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCAGAGCTCTTGCCTTTCTaGAAACTTAATTCCCCCAAC +
Preference number: 3 (lower is better)
Translates to: WGYSSELSPPWHPVHSRPELLPF*KLNSPN
Trigger: GTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAGCTC...TGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR-3UTR CAA 90 bp CCTCCCATCCCTGTCCTGTCCCTGGCCTCAGGTCTATGGCTCCATCCCAGTCACGTGACTTGTACCTGCTaGCAAGAACCAATTGTTAAA +
Preference number: 3 (lower is better)
Translates to: PPIPVLSLASGLWLHPSHVTCTC*QEPIVK
Trigger: TTTAACAATTGGTTCTTGCAAGCAGGTACAAGTCAC...GTGACTGGGATGGAGCCATAGACCTGAGGCCAGGGACAGGACAGGGATGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 72 bp CATGATTCTGGCCATCAGGTGAACCTGGACTCACTCTaGCTCACCCTGACAGCCTGGATAACCTGGAACAAG +
Preference number: 3 (lower is better)
Translates to: HDSGHQVNLDSL*LTLTAWITWNK
Trigger: CTTGTTCCAGGTTATCCAGGCTGTCAGGGTGAGTCAGAGTGAGTCCAGGTTCACCTGATGGCCAGAATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp AGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTaGAAACTCAGCCCTCATTACTTACCAGGGTTTTCT +
Preference number: 3 (lower is better)
Translates to: SPPWHPVHSRPL*KLSPHYLPGFS
Trigger: AGAAAACCCTGGTAAGTAATGAGGGCTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR GCA 72 bp CCCTGCCCTGATGTCATGCAGTTCATTGAGAACAGCTaGTGCAGGCACATCAGCAGACATTTACTCCCTGAC +
Preference number: 3 (lower is better)
Translates to: PCPDVMQFIENS*CRHISRHLLPD
Trigger: GTCAGGGAGTAAATGTCTGCTGATGTGCCTGCAGCAGCTGTTCTCAATGAACTGCATGACATCAGGGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp GGGTGGAGCATCTGTGTTCTCACATCCTTGCTACACTaGCTCTGTCATCTTGAATCATGCGAGGGGCCACTT +
Preference number: 3 (lower is better)
Translates to: GWSICVLTSLLH*LCHLESCEGPL
Trigger: AAGTGGCCCCTCGCATGATTCAAGATGACAGAGGCAGTGTAGCAAGGATGTGAGAACACAGATGCTCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp CCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTaGTCCTCTACAGCTTCCCAATATAAACCTGCACAG +
Preference number: 3 (lower is better)
Translates to: PYLGRLWRLHKS*SSTASQYKPAQ
Trigger: CTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR CCA 72 bp CCACCATATAACATAGATGAGAGGGTGCGTGGGACATaGGTCAATACACGACTTCCCTCCCTCATGTGCCTG +
Preference number: 3 (lower is better)
Translates to: PPYNIDERVRGT*VNTRLPSLMCL
Trigger: CAGGCACATGAGGGAGGGAAGTCGTGTATTGACCCATGTCCCACGCACCCTCTCATCTATGTTATATGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp CCAGCCAGGAAAGTGGGGACAATATTGACACTGAGGTaGTCTGGGTGGAGCATCTGTGTTCTCACATCCTTG +
Preference number: 3 (lower is better)
Translates to: PARKVGTILTLR*SGWSICVLTSL
Trigger: CAAGGATGTGAGAACACAGATGCTCCACCCAGACCACCTCAGTGTCAATATTGTCCCCACTTTCCTGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp CCCCACCTCACTCTACACGCTGAACCCTGGGCACCATaGATTCAAAGACATCTTTGCCACTGTGAGATCTCA +
Preference number: 3 (lower is better)
Translates to: PHLTLHAEPWAP*IQRHLCHCEIS
Trigger: TGAGATCTCACAGTGGCAAAGATGTCTTTGAATCCATGGTGCCCAGGGTTCAGCGTGTAGAGTGAGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CAA 90 bp ATCCCTGATATGAGACTACTCCTGAGACAGCTAGTGAGAAGGCAGGTGGCAGAAAGGCCAGGGGTGTCATaGACCTTGAGCTCTTGCCTT +
Preference number: 3 (lower is better)
Translates to: IPDMRLLLRQLVRRQVAERPGVS*TLSSCL
Trigger: AAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCT...TTCTGCCACCTGCCTTCTCACTAGCTGTCTCAGGAGTAGTCTCATATCAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
3UTR-3UTR CAA 90 bp TATGATATTAGTCCCCAGATGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCGGGTTATGGGAACAGTaGACTCTGGACCACAGAGTG +
Preference number: 3 (lower is better)
Translates to: YDISPQMFISWAGGTPQSGLWEQ*TLDHRV
Trigger: CACTCTGTGGTCCAGAGTCAACTGTTCCCATAACCC...GCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACATCTGGGGACTAATATCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR-3UTR CAA 90 bp GGGAGGTGTGAAGGGGGCAGGGAATATTGGAGGGTAATAGGAGATATTTTGAGGTCCAACCTAGGTACCTaGGCAGTACAGCCAGCTACT +
Preference number: 3 (lower is better)
Translates to: GRCEGGREYWRVIGDILRSNLGT*AVQPAT
Trigger: AGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGA...CCTCAAAATATCTCCTATTACCCTCCAATATTCCCTGCCCCCTTCACACCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 72 bp CCTAAACTGGGAAATCTCAAGGACTGGGACTGCACCTaGCTTTTCTCTGTGCTCAGCACAGAGTCAGGCACA +
Preference number: 3 (lower is better)
Translates to: PKLGNLKDWDCT*LFSVLSTESGT
Trigger: TGTGCCTGACTCTGTGCTGAGCACAGAGAAAAGTCAGGTGCAGTCCCAGTCCTTGAGATTTCCCAGTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
3UTR GCA 72 bp TCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTaGACAAGTCCTGGTCCTCTACAGCTTCCCAATATA +
Preference number: 3 (lower is better)
Translates to: SLMVHIWGDCGV*TSPGPLQLPNI
Trigger: TATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR CCA 72 bp CAGGTCACCCACCTGGCACAGTACAGAGTAATCATTTaGGTCATGGTCTGTGATGGGTCTCTGTCACATGAG +
Preference number: 3 (lower is better)
Translates to: QVTHLAQYRVII*VMVCDGSLSHE
Trigger: CTCATGTGACAGAGACCCATCACAGACCATGACCCAAATGATTACTCTGTACTGTGCCAGGTGGGTGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CAA 90 bp CAGGCCAGGGGTGTCATTGACCTTGAGCTCTTGCCTTTCTTGAAACTTAATTCCGGGTTATGGGAACAGTaGACTCTGGACCACAGAGTG +
Preference number: 3 (lower is better)
Translates to: QARGVIDLELLPFLKLNSGLWEQ*TLDHRV
Trigger: CACTCTGTGGTCCAGAGTCAACTGTTCCCATAACCC...GGAATTAAGTTTCAAGAAAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR TCA 72 bp TGTTCTCACATCCTTGCTACACTGCCTCTGTCATCTTaGATCATGCGAGGGGCCACTTATAGACCCTTCTGC +
Preference number: 3 (lower is better)
Translates to: CSHILATLPLSS*IMRGATYRPFC
Trigger: GCAGAAGGGTCTATAAGTGGCCCCTCGCATGATTCAAGATGACAGAGGCAGTGTAGCAAGGATGTGAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 72 bp CCACGCCAGAGAGGAGGGGACTTTTCATGTGGCTGCTaGTTTGGAATTTGGTTCCAGGACATAAATCTGAGG +
Preference number: 3 (lower is better)
Translates to: PRQRGGDFSCGC*FGIWFQDINLR
Trigger: CCTCAGATTTATGTCCTGGAACCAAATTCCAAATCAGCAGCCACATGAAAAGTCCCCTCCTCTCTGGCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp TGCCCTGATGTCATGCAGTTCATTGAGAACAGCTGCTaGAGGCACATCAGCAGACATTTACTCCCTGACACT +
Preference number: 3 (lower is better)
Translates to: CPDVMQFIENSC*RHISRHLLPDT
Trigger: AGTGTCAGGGAGTAAATGTCTGCTGATGTGCCTGCAGCAGCTGTTCTCAATGAACTGCATGACATCAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp GACTTGACCTGGAGCAACCATGTGTGGATAACATGTTaGTTAGGGCCTCTTCTAACCTCAGGGGGTGAAAGT +
Preference number: 3 (lower is better)
Translates to: DLTWSNHVWITC*LGPLLTSGGES
Trigger: ACTTTCACCCCCTGAGGTTAGAAGAGGCCCTAAGCAACATGTTATCCACACATGGTTGCTCCAGGTCAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp AAAGTGGGGACAATATTGACACTGAGGTGGTCTGGGTaGAGCATCTGTGTTCTCACATCCTTGCTACACTGC +
Preference number: 3 (lower is better)
Translates to: KVGTILTLRWSG*SICVLTSLLHC
Trigger: GCAGTGTAGCAAGGATGTGAGAACACAGATGCTCCACCCAGACCACCTCAGTGTCAATATTGTCCCCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp CAGGAAAGTGGGGACAATATTGACACTGAGGTGGTCTaGGTGGAGCATCTGTGTTCTCACATCCTTGCTACA +
Preference number: 3 (lower is better)
Translates to: QESGDNIDTEVV*VEHLCSHILAT
Trigger: TGTAGCAAGGATGTGAGAACACAGATGCTCCACCCAGACCACCTCAGTGTCAATATTGTCCCCACTTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CAA 90 bp AGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCTCCGAGCTCTTGCCTTTCTaGAAACTTAATTCCCCCAAC +
Preference number: 3 (lower is better)
Translates to: RLWYVILVSHLPLWACFSELLPF*KLNSPN
Trigger: GTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAGCTC...GGAGAAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR TCA 72 bp GCAGTTTATGGATGGGAAAGGAAAATCACACGTCACTaGGCAGGGAGCATGGGTGGGAGGAAAATCAAACAG +
Preference number: 3 (lower is better)
Translates to: AVYGWERKITRH*AGSMGGRKIKQ
Trigger: CTGTTTGATTTTCCTCCCACCCATGCTCCCTGCTCAGTGACGTGTGATTTTCCTTTCCCATCCATAAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp GGTAGCTTTGGTGACTTGACCTGGAGCAACCATGTGTaGATAACATGTTGCTTAGGGCCTCTTCTAACCTCA +
Preference number: 3 (lower is better)
Translates to: GSFGDLTWSNHV*ITCCLGPLLTS
Trigger: TGAGGTTAGAAGAGGCCCTAAGCAACATGTTATCCACACATGGTTGCTCCAGGTCAAGTCACCAAAGCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp GGGAAAGGAAAATCACACGTCACTGAGCAGGGAGCATaGGTGGGAGGAAAATCAAACAGTTGCATGTTTGTG +
Preference number: 3 (lower is better)
Translates to: GKGKSHVTEQGA*VGGKSNSCMFV
Trigger: CACAAACATGCAACTGTTTGATTTTCCTCCCACCCATGCTCCCTGCTCAGTGACGTGTGATTTTCCTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR-3UTR CAA 90 bp CACTGGCCAGACACACTGTCCTCTCCTTCAAAACATGTATCCCAATGTGGTTACTGTGTGGATAACATGTaGCTTAGGGCCTCTTCTAAC +
Preference number: 3 (lower is better)
Translates to: HWPDTLSSPSKHVSQCGYCVDNM*LRASSN
Trigger: GTTAGAAGAGGCCCTAAGCAACATGTTATCCACACA...GTAACCACATTGGGATACATGTTTTGAAGGAGAGGACAGTGTGTCTGGCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 72 bp CCCAGCCACTCGGCATTATCCAGTGGTGTGCTAGAGTaGCTTGTACCTGCTTGCAAGAACCAATTGTTAAAT +
Preference number: 3 (lower is better)
Translates to: PSHSALSSGVLE*LVPACKNQLLN
Trigger: ATTTAACAATTGGTTCTTGCAAGCAGGTACAAGTCACTCTAGCACACCACTGGATAATGCCGAGTGGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR GCA 72 bp CATGGGTGGGAGGAAAATCAAACAGTTGCATGTTTGTaGCTCACTGCATTGTCTCTGTCTAGTAAACCGGGA +
Preference number: 3 (lower is better)
Translates to: HGWEENQTVACL*LTALSLSSKPG
Trigger: TCCCGGTTTACTAGACAGAGACAATGCAGTGAGGCACAAACATGCAACTGTTTGATTTTCCTCCCACCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp CCAGAGAGGAGGGGACTTTTCATGTGGCTGCTGATTTaGAATTTGGTTCCAGGACATAAATCTGAGGACACA +
Preference number: 3 (lower is better)
Translates to: PERRGLFMWLLI*NLVPGHKSEDT
Trigger: TGTGTCCTCAGATTTATGTCCTGGAACCAAATTCCAAATCAGCAGCCACATGAAAAGTCCCCTCCTCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 72 bp TGGAAAATTATGGTCTTACTTGGGCTGAAAATAGCATaGGGCATCAGGGCAGGAACTTCACCCACAAGGCAA +
Preference number: 3 (lower is better)
Translates to: WKIMVLLGLKIA*GIRAGTSPTRQ
Trigger: TTGCCTTGTGGGTGAAGTTCCTGCCCTGATGCCTCATGCTATTTTCAGCCCAAGTAAGACCATAATTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 72 bp TTCAAAACATGTATCCCAATGTGGTTACGTACTAAGTaGTGTCAACTCTGTGAGGGCAGGGCCCAGCTGATT +
Preference number: 3 (lower is better)
Translates to: FKTCIPMWLRTK*CQLCEGRAQLI
Trigger: AATCAGCTGGGCCCTGCCCTCACAGAGTTGACATCACTTAGTACGTAACCACATTGGGATACATGTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR TCA 72 bp ATCGGCTACATTAACAGAAGTATAGAACCTAGAAGGTaGGAGGTGAATAGCTCACACTATTCTGGGCAGGTC +
Preference number: 3 (lower is better)
Translates to: IGYINRSIEPRR*EVNSSHYSGQV
Trigger: GACCTGCCCAGAATAGTGTGAGCTATTCACCTCTCACCTTCTAGGTTCTATACTTCTGTTAATGTAGCCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp ACTCAAAAGTTTGGAGTTTGCCAAATGCGCAGTTTATaGATGGGAAAGGAAAATCACACGTCACTGAGCAGG +
Preference number: 3 (lower is better)
Translates to: TQKFGVCQMRSL*MGKENHTSLSR
Trigger: CCTGCTCAGTGACGTGTGATTTTCCTTTCCCATCCATAAACTGCGCATTTGGCAAACTCCAAACTTTTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp GCAGGAAAGACGTTGCACACTCTAATCAGGTCATTTTaGGATAGCTTAGCGGAGAGACTGTTTTTACAAAGG +
Preference number: 3 (lower is better)
Translates to: AGKTLHTLIRSF*DSLAERLFLQR
Trigger: CCTTTGTAAAAACAGTCTCTCCGCTAAGCTATCCCAAAATGACCTGATTAGAGTGTGCAACGTCTTTCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp TGGAATTTGGTTCCAGGACATAAATCTGAGGACACATaGGGTAAAATAGCCCGCTTTCTAAAGAAACCTGGA +
Preference number: 3 (lower is better)
Translates to: WNLVPGHKSEDT*GKIARFLKKPG
Trigger: TCCAGGTTTCTTTAGAAAGCGGGCTATTTTACCCCATGTGTCCTCAGATTTATGTCCTGGAACCAAATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CCA 72 bp TATAGTTTGAATTTGGCCATAAGAGTTTTTGCACCATaGAAATGGGCAGTTCTACAAAGAAGGGGTTCCCAG +
Preference number: 3 (lower is better)
Translates to: YSLNLAIRVFAP*KWAVLQRRGSQ
Trigger: CTGGGAACCCCTTCTTTGTAGAACTGCCCATTTCCATGGTGCAAAAACTCTTATGGCCAAATTCAAACTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
3UTR TCA 72 bp GATGGAAATCTTAAACCTGACTTTGTTACCCAAAAGTaGCTCAAAAGTTTGGAGTTTGCCAAATGCGCAGTT +
Preference number: 3 (lower is better)
Translates to: DGNLKPDFVTQK*LKSLEFAKCAV
Trigger: AACTGCGCATTTGGCAAACTCCAAACTTTTGAGTCACTTTTGGGTAACAAAGTCAGGTTTAAGATTTCCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp GGCCGTGGGTGGAGCCCCCAGGGACAGGGGGTGACTGGCCCTGCCTGGCCCATTCCAGAGCCCTGCTCCTaGATCAGCTGCCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GRGWSPQGQGVTGPAWPIPEPCS*ISCPVA
Trigger: GGCCACAGGGCAGCTGATGCAGGAGCAGGGCTCTGG...AATGGGCCAGGCAGGGCCAGTCACCCCCTGTCCCTGGGGGCTCCACCCACGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GGCCGTGGGTGGAGCCCCCAGGGACAGGGGGTGACTGGCCCTGCCTGGCCCATTGGGCCTGGAGGGTCTTaGAAATGCCCGGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GRGWSPQGQGVTGPAWPIGPGGS*KCPGSS
Trigger: GCTGCTCCCCGGGCATTTCCAAGACCCTCCAGGCCC...AATGGGCCAGGCAGGGCCAGTCACCCCCTGTCCCTGGGGGCTCCACCCACGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GGCCGTGGGTGGAGCCCCCAGGGACAGGGGGTGACTGGCCCTGCCTGGCCCATTTCCACCCACACCACTTaGGCTGCTATCCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: GRGWSPQGQGVTGPAWPISTHTT*AAIPGA
Trigger: GGCACCTGGGATAGCAGCCCAAGTGGTGTGGGTGGA...AATGGGCCAGGCAGGGCCAGTCACCCCCTGTCCCTGGGGGCTCCACCCACGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp CTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATCTTCTCCTCTCAGGGTaGCGTCGCCGCCGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LLGWGYSSELSPPWHPVHLLLSG*RRRRSR
Trigger: CCGGGAGCGGCGGCGACGGCACCCTGAGAGGAGAAG...ATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR GCA 90 bp GAGCCTGGAGTCAGCTGTCCAGCCTGCTTATGGCTCATGCACACCCTGCCCTCTGGGGCCCAGGTCTGCTaGCATCGCCCTGACCAGCCC +
Preference number: 4 (lower is better)
Translates to: EPGVSCPACLWLMHTLPSGAQVC*HRPDQP
Trigger: GGGCTGGTCAGGGCGATGGCAGCAGACCTGGGCCCC...AGAGGGCAGGGTGTGCATGAGCCATAAGCAGGCTGGACAGCTGACTCCAGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp TGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCAGCCGGCTCGCAACTGTaGCCCGGGGCGACAGCCGCT +
Preference number: 4 (lower is better)
Translates to: WGYSSELSPPWHPVHSRPAGSQL*PGATAA
Trigger: AGCGGCTGTCGCCCCGGGGCACAGTTGCGAGCCGGC...TGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393596.2
CDS-3UTR TCA 90 bp GCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACTCAGCCCGGGGCCCTGTCCAGCTaGGCGCCACACGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: AKSTVAPSPFQTTVQTQPGALSS*APHVSP
Trigger: TGGGCTGACGTGTGGCGCTCAGCTGGACAGGGCCCC...GGGCTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp TGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCCCGCAGAGACCCACGTaGCTGGGAGCCCGGCTACCC +
Preference number: 4 (lower is better)
Translates to: CSSLGLGVLLRAKSTVAPPQRPT*LGARLP
Trigger: GGGTAGCCGGGCTCCCAGGCACGTGGGTCTCTGCGG...GGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR GCA 90 bp CTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCCCAGGGGCCCAGGTCTaGTGCCATCGCCCTGACCAG +
Preference number: 4 (lower is better)
Translates to: LGVLLRAKSTVAPSPFQTPGAQV*CHRPDQ
Trigger: CTGGTCAGGGCGATGGCAGCAGACCTGGGCCCCTGG...GGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp CTCACTCCAAGGTCAGAGCATGAGCTGCACCTCTCCACCCACACCACTTGGGCTGGTGCCGAGGTGTCGTaGCAGGTTACGCGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: LTPRSEHELHLSTHTTWAGAEVS*QVTRPP
Trigger: CGGGGGCCGCGTAACCTGCCACGACACCTCGGCACC...AGCCCAAGTGGTGTGGGTGGAGAGGTGCAGCTCATGCTCTGACCTTGGAGTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp TGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCTGCAGAGCACCGTGCTaGAGGGCCAGTGGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: CSSLGLGVLLRAKSTVAPCRAPC*RASGRR
Trigger: GCGGCGACCACTGGCCCTTCAGCACGGTGCTCTGCA...GGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp GGGGTCATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCCCAGGGGCCCAGGTCTaGTGCCATCGCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GVIQHESLMVHIWGDCGVPGAQV*CHRPAG
Trigger: CCCTGCAGGGCGATGGCAGCAGACCTGGGCCCCTGG...GACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGATGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311131.6
CDS-3UTR GCA 90 bp CCTCCCATCCCTGTCCTGTCCCTGGCCTCAGGTCTATGGCTCCATCCCAGTCACACCCAGCCCCAACCCTaGCTTGAGCCTGGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: PPIPVLSLASGLWLHPSHTQPQP*LEPGVS
Trigger: GCTGACTCCAGGCTCAAGGCAGGGTTGGGGCTGGGT...GTGACTGGGATGGAGCCATAGACCTGAGGCCAGGGACAGGACAGGGATGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATAGAGACCCACGTGCCTaGGAGCCCGGCTACCCACCT +
Preference number: 4 (lower is better)
Translates to: LLGWGYSSELSPPWHPVHRDPRA*EPGYPP
Trigger: AGGTGGGTAGCCGGGCTCCCAGGCACGTGGGTCTCT...ATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp CATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCGGTGCCGAGGTGTCGTaGCAGGTTACGCGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: HIWGDCGVCTSPGPLQLPGAEVS*QVTRPP
Trigger: CGGGGGCCGCGTAACCTGCCACGACACCTCGGCACC...GGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp GGGGTCATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCAGGCCACGAAGCGGCTaGAGAGCTCGGGTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GVIQHESLMVHIWGDCGVRPRSG*RARVPR
Trigger: CCTCGGCACCCGAGCTCTTCAGCCGCTTCGTGGCCT...GACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGATGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp TGTCCCTGGCCTCAGGTCTATGGCTCCATCCCAGTCACCCTGGGCAGGAAGAGCAGAGCAGGCCCAGCATaGCTGAGCTGTAGGCCACGA +
Preference number: 4 (lower is better)
Translates to: CPWPQVYGSIPVTLGRKSRAGPA*LSCRPR
Trigger: TCGTGGCCTACAGCTCAGTCATGCTGGGCCTGCTCT...GCTCTTCCTGCCCAGGGTGACTGGGATGGAGCCATAGACCTGAGGCCAGGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp TGTCCCTGGCCTCAGGTCTATGGCTCCATCCCAGTCACCCTGGGCAGGAAGAGCAGTAGAGGGTGCGGGTaGCGTGGAATGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: CPWPQVYGSIPVTLGRKSSRGCG*RGMAGS
Trigger: GCTTCCTGCCATTCCACGTCACCCGCACCCTCTACT...GCTCTTCCTGCCCAGGGTGACTGGGATGGAGCCATAGACCTGAGGCCAGGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp GGCCGTGGGTGGAGCCCCCAGGGACAGGGGGTGACTGGCCCTGCCTGGCCCATTTTTCTCCATTTGACTTaGTTAGGCTGGACTCCAACC +
Preference number: 4 (lower is better)
Translates to: GRGWSPQGQGVTGPAWPIFLHLT*LGWTPT
Trigger: GGTTGGAGTCCAGCCTAATCAAGTCAAATGGAGAAA...AATGGGCCAGGCAGGGCCAGTCACCCCCTGTCCCTGGGGGCTCCACCCACGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp CTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCCTGTGCAGGGGGCACTaGTGGCCCAGGAAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: LGVLLRAKSTVAPSPFQTLCRGH*WPRKQG
Trigger: ACCTTGCTTCCTGGGCCATCAGTGCCCCCTGCACAG...GGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp CTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATGGACCTGGACCGGGCTaGAGGGAACTCTGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: LLGWGYSSELSPPWHPVHGPGPG*RELCGK
Trigger: TTTCCCGCAGAGTTCCCTGCAGCCCGGTCCAGGTCC...ATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp TGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCCCCCCAGGACAGACCTaGTTCCCTCCTCCCACACCC +
Preference number: 4 (lower is better)
Translates to: CSSLGLGVLLRAKSTVAPPPGQT*FPPPTP
Trigger: GGGTGTGGGAGGAGGGAAGCAGGTCTGTCCTGGGGG...GGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACA
62% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp TGTCCCTGGCCTCAGGTCTATGGCTCCATCCCAGTCACCCTGGGCAGGAAGAGCCCCTCACGTCACTGCTaGACAATGGTCTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: CPWPQVYGSIPVTLGRKSPSRHC*TMVWGQ
Trigger: CTGGCCCCAGACCATTGTCCAGCAGTGACGTGAGGG...GCTCTTCCTGCCCAGGGTGACTGGGATGGAGCCATAGACCTGAGGCCAGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp TGTCCCTGGCCTCAGGTCTATGGCTCCATCCCAGTCACCCTGGGCAGGAAGAGCCTGGGGTCTGCTCAGTaGATGGGCAACTCACGTGCC +
Preference number: 4 (lower is better)
Translates to: CPWPQVYGSIPVTLGRKSLGSAQ*MGNSRA
Trigger: GGCACGTGAGTTGCCCATCCACTGAGCAGACCCCAG...GCTCTTCCTGCCCAGGGTGACTGGGATGGAGCCATAGACCTGAGGCCAGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CCTCCCATCCCTGTCCTGTCCCTGGCCTCAGGTCTATGGCTCCATCCCAGTCACCTGTGTGGCTCTGTGTaGCGGCAGTGGGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: PPIPVLSLASGLWLHPSHLCGSV*RQWGHF
Trigger: GAAGTGACCCCACTGCCGCCACACAGAGCCACACAG...GTGACTGGGATGGAGCCATAGACCTGAGGCCAGGGACAGGACAGGGATGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACTCAGCCCGGGACAGGGGGTGACTaGCCCTGCCTGGCCCATTGT +
Preference number: 4 (lower is better)
Translates to: AKSTVAPSPFQTTVQTQPGTGGD*PCLAHC
Trigger: ACAATGGGCCAGGCAGGGCCAGTCACCCCCTGTCCC...GGGCTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp ACTCAGCCCTCATTACTTACCAGGGTTTTCTGGCCAACCTGTGACTTGGCCCCCTGCAGAGCACCGTGCTaGAGGGCCAGTGGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: TQPSLLTRVFWPTCDLAPCRAPC*RASGRR
Trigger: GCGGCGACCACTGGCCCTTCAGCACGGTGCTCTGCA...GGGGGCCAAGTCACAGGTTGGCCAGAAAACCCTGGTAAGTAATGAGGGCTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp TCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACGCGCGCGCTGGTGGTaGCAAAGTAGAGCACGGGGG +
Preference number: 4 (lower is better)
Translates to: SSELSPPWHPVHSRPLCKRARWW*QSRARG
Trigger: CCCCCGTGCTCTACTTTGTCACCACCAGCGCGCGCG...TTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp GCTGGACTCCAACCTAGGTACCTTGGCAGTACAGCCAGCTACTTGCATGGGAGTCGCGCGCGCTGGTGGTaGCAAAGTAGAGCACGGGGG +
Preference number: 4 (lower is better)
Translates to: AGLQPRYLGSTASYLHGSRARWW*QSRARG
Trigger: CCCCCGTGCTCTACTTTGTCACCACCAGCGCGCGCG...ACTCCCATGCAAGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGAGTCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp ATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGAGGCCACGAAGCGGCTaGAGAGCTCGGGTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: MVHIWGDCGVCTSPGPLQRPRSG*RARVPR
Trigger: CCTCGGCACCCGAGCTCTTCAGCCGCTTCGTGGCCT...CTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp ATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACACTTCTCCTCTCAGGGTaGCGTCGCCGCCGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: IQHESLMVHIWGDCGVCTLLLSG*RRRRSR
Trigger: CCGGGAGCGGCGGCGACGGCACCCTGAGAGGAGAAG...TGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR GCA 90 bp CTGATTTGCCTCCATAGCCCCCGGCCTGGTGCCAGGCATATAAATGCTGACCACGGCTACCCACCTCCCTaGGCTGTTCCCCAACCCCGA +
Preference number: 4 (lower is better)
Translates to: LICLHSPRPGARHINADHGYPPP*AVPQPR
Trigger: TCGGGGTTGGGGAACAGCGCAGGGAGGTGGGTAGCC...GTGGTCAGCATTTATATGCCTGGCACCAGGCCGGGGGCTATGGAGGCAAATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp AGAGTCAGGCACAGAAGCCAACTGGCTTTACAGTGGGGGATGACCTGGGGCCTGGCTGGGGCCAGTGGGTaGCTTGGCATCTCGGGCAAA +
Preference number: 4 (lower is better)
Translates to: RVRHRSQLALQWGMTWGLAGASG*LGISGK
Trigger: TTTGCCCGAGATGCCAAGCCACCCACTGGCCCCAGC...CAGGCCCCAGGTCATCCCCCACTGTAAAGCCAGTTGGCTTCTGTGCCTGACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp TGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACAGTGGGGGATGACCTaGGGCCTGGAGAGAGGATCC +
Preference number: 4 (lower is better)
Translates to: WGYSSELSPPWHPVHSRPQWGMT*GLERGS
Trigger: GGATCCTCTCTCCAGGCCCCAGGTCATCCCCCACTG...TGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp TCCAGACATCGCACTGTGTGGCTCTGTGTGGCGGCAGTGGGGTCACTTCACTTCCCCCCGCGTCACTGCTaGACAATGGTCCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SRHRTVWLCVAAVGSLHFPPRHC*TMVQGS
Trigger: ACTGCCCTGGACCATTGTCCAGCAGTGACGCGGGGG...GAAGTGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp CTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATGCAGTCGCCGAGCCATaGGCACGTAACAGACAAGGA +
Preference number: 4 (lower is better)
Translates to: LLGWGYSSELSPPWHPVHAVAEP*ARNRQG
Trigger: TCCTTGTCTGTTACGTGCTCATGGCTCGGCGACTGC...ATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp CATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCTTTCTGGCCAACCTGTaGCTTGGCCCCCACCCCAGG +
Preference number: 4 (lower is better)
Translates to: HIWGDCGVCTSPGPLQLPFLANL*LGPHPR
Trigger: CCTGGGGTGGGGGCCAAGTCACAGGTTGGCCAGAAA...GGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp TCCAGACATCGCACTGTGTGGCTCTGTGTGGCGGCAGTGGGGTCACTTCACTTCAGTCCTGACCCAGCCTaGGCACCACCCTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: SRHRTVWLCVAAVGSLHFSPDPA*APPCHS
Trigger: AGAATGGCAGGGTGGTGCTCAGGCTGGGTCAGGACT...GAAGTGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp AGAGTCAGGCACAGAAGCCAACTGGCTTTACAGTGGGGGATGACCTGGGGCCTGCCCCATACTAAGTCCTaGCCCAGCCTGAGCACCACC +
Preference number: 4 (lower is better)
Translates to: RVRHRSQLALQWGMTWGLPHTKS*PSLSTT
Trigger: GGTGGTGCTCAGGCTGGGTCAGGACTTAGTATGGGG...CAGGCCCCAGGTCATCCCCCACTGTAAAGCCAGTTGGCTTCTGTGCCTGACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp ATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGGCACCACGGCGATGGTaGGCACGGACTTGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: MVHIWGDCGVCTSPGPLQAPRRW*ARTCAW
Trigger: CCAAGCGCAAGTCCGTGCGCACCATCGCCGTGGTGC...CTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp CTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCAGGGGCCCAGGTCTGCTaGCATCGCCCTGACCAGCCC +
Preference number: 4 (lower is better)
Translates to: LWRLHKSWSSTASQYKPAGAQVC*HRPDQP
Trigger: GGGCTGGTCAGGGCGATGGCAGCAGACCTGGGCCCC...TGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp TCCAGACATCGCACTGTGTGGCTCTGTGTGGCGGCAGTGGGGTCACTTCACTTCCACACCCTGCCCTCTTaGCCCATGTCTTTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SRHRTVWLCVAAVGSLHFHTLPS*PMSLPG
Trigger: CCCAGGCAAAGACATGGGGCAAGAGGGCAGGGTGTG...GAAGTGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp TGTCCCTGGCCTCAGGTCTATGGCTCCATCCCAGTCACCCTGGGCAGGAAGAGCCGTATGGCCCACTGTTaGTCACTGGCCAGACACACT +
Preference number: 4 (lower is better)
Translates to: CPWPQVYGSIPVTLGRKSRMAHC*SLARHT
Trigger: AGTGTGTCTGGCCAGTGAGCAACAGTGGGCCATACG...GCTCTTCCTGCCCAGGGTGACTGGGATGGAGCCATAGACCTGAGGCCAGGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp AGGTGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCGGTCCCCCGCGTCACTaGTGGACAATGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RWQKGTDWRKDPCVAGESGPPRH*WTMVQG
Trigger: GCCCTGGACCATTGTCCAGCAGTGACGCGGGGGACC...GCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp CCTCCCATCCCTGTCCTGTCCCTGGCCTCAGGTCTATGGCTCCATCCCAGTCACCTTCTCAGGGTTCCTTaGCCCAGCTCTCTACACACC +
Preference number: 4 (lower is better)
Translates to: PPIPVLSLASGLWLHPSHLLRVP*PSSLHT
Trigger: GGTGTGTAGAGAGCTGGGGCAAGGAACCCTGAGAAG...GTGACTGGGATGGAGCCATAGACCTGAGGCCAGGGACAGGACAGGGATGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp TGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACAAGCCGTCCAGTTATaGGCTACACGCCGGCTCGCA +
Preference number: 4 (lower is better)
Translates to: WGYSSELSPPWHPVHSRPQAVQL*ATRRLA
Trigger: TGCGAGCCGGCGTGTAGCGCATAACTGGACGGCTTG...TGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393596.2
CDS-3UTR CCA 90 bp ACTCAGCCCTCATTACTTACCAGGGTTTTCTGGCCAACCTGTGACTTGGCCCCCAGAGACCCACGTGCCTaGGAGCCCGGCTACCCACCT +
Preference number: 4 (lower is better)
Translates to: TQPSLLTRVFWPTCDLAPRDPRA*EPGYPP
Trigger: AGGTGGGTAGCCGGGCTCCCAGGCACGTGGGTCTCT...GGGGGCCAAGTCACAGGTTGGCCAGAAAACCCTGGTAAGTAATGAGGGCTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp CTGGGGCCTGGAGAGAGGATCCCTGATATGAGACTACTCCTGAGACAGCTAGTGGCACACGCCTGGACCTaGACCGGGCTGCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: LGPGERIPDMRLLLRQLVAHAWT*TGLQGT
Trigger: AGTTCCCTGCAGCCCGGTCCAGGTCCAGGCGTGTGC...CACTAGCTGTCTCAGGAGTAGTCTCATATCAGGGATCCTCTCTCCAGGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp CTGGACTCCAACCTAGGTACCTTGGCAGTACAGCCAGCTACTTGCATGGGAGTCCCAGCACCACGGCGATaGTGCGCACGGACTTGCGCT +
Preference number: 4 (lower is better)
Translates to: LDSNLGTLAVQPATCMGVPAPRR*CARTCA
Trigger: AGCGCAAGTCCGTGCGCACCATCGCCGTGGTGCTGG...GACTCCCATGCAAGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGAGTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp TATGATATTAGTCCCCAGATGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCCCGGGGTGGCAGGGCTaGGGCCAGTGGGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: YDISPQMFISWAGGTPQSPGWQG*GQWVAW
Trigger: CCAAGCCACCCACTGGCCCCAGCCCTGCCACCCCGG...GCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACATCTGGGGACTAATATCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp GGGGTCATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCGGCCAACCTGTGACTTaGCCCCCACCCCAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: GVIQHESLMVHIWGDCGVGQPVT*PPPQVA
Trigger: AGCTACCTGGGGTGGGGGCCAAGTCACAGGTTGGCC...GACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGATGACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp AGTTACAGCCTCACACTGGCTCCTAGCCCATGGGAGCCTCCAGATGGGTCTATGCCTCCTGTGTCCTTGTaGAGTGGCTCGGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SYSLTLAPSPWEPPDGSMPPVSL*SGSGLW
Trigger: CCACAGGCCCGAGCCACTCCACAAGGACACAGGAGG...CATAGACCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp TCCAGACATCGCACTGTGTGGCTCTGTGTGGCGGCAGTGGGGTCACTTCACTTCTTCCAGAGGTGCCCCTaGTTCACCCAGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SRHRTVWLCVAAVGSLHFFQRCP*FTQGLQ
Trigger: CTGGAGACCCTGGGTGAACCAGGGGCACCTCTGGAA...GAAGTGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp TGTCCCTGGCCTCAGGTCTATGGCTCCATCCCAGTCACCCTGGGCAGGAAGAGCTTCCCTGGAGACGTATaGCCCACTGTTGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: CPWPQVYGSIPVTLGRKSFPGDV*PTVAHW
Trigger: CCAGTGAGCAACAGTGGGCCATACGTCTCCAGGGAA...GCTCTTCCTGCCCAGGGTGACTGGGATGGAGCCATAGACCTGAGGCCAGGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp TGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACAAGCAGGGCAGAGGTaGTCCCACACATTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: WGYSSELSPPWHPVHSRPQAGQR*SHTFPQ
Trigger: CTGGGGGAATGTGTGGGACCACCTCTGCCCTGCTTG...TGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GAGCTCCAGACATCGCACTGTGTGGCTCTGTGTGGCGGCAGTGGGGTCACTTCACCTCACTCTGTAGTCTaGTCACTCCTGGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: ELQTSHCVALCGGSGVTSPHSVV*SLLAKP
Trigger: GGGCTTGGCCAGGAGTGACCAGACTACAGAGTGAGG...TGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GGCCGTGGGTGGAGCCCCCAGGGACAGGGGGTGACTGGCCCTGCCTGGCCCATTCAAATGCGCAGTTTATaGATGGGAAAGGAAAATCAC +
Preference number: 4 (lower is better)
Translates to: GRGWSPQGQGVTGPAWPIQMRSL*MGKENH
Trigger: GTGATTTTCCTTTCCCATCCATAAACTGCGCATTTG...AATGGGCCAGGCAGGGCCAGTCACCCCCTGTCCCTGGGGGCTCCACCCACGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CAA 72 bp CTCCAGTCCAGGAGCCACAGACTGGAGCTAATGAAGTaGGCTGAGGCAGTGGGAGCAGCCAAAGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LQSRSHRLELMK*AEAVGAAKEPW
Trigger: CCAGGGCTCTTTGGCTGCTCCCACTGCCTCAGCCAACTTCATTAGCTCCAGTCTGTGGCTCCTGGACTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp TGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCCATCCCAGGTGCCATTaGTGGTGTCATTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: CSSLGLGVLLRAKSTVAPHPRCH*WCHSRG
Trigger: GCCCCTGGAATGACACCATCAATGGCACCTGGGATG...GGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp CGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTTGCAGAGCACCGTGCTaGAGGGCCAGTGGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: RLHKSWSSTASQYKPAQACRAPC*RASGRR
Trigger: GCGGCGACCACTGGCCCTTCAGCACGGTGCTCTGCA...AGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp GGGGTCATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCAGAGCAGGCCCAGCATaGCTGAGCTGTAGGCCACGA +
Preference number: 4 (lower is better)
Translates to: GVIQHESLMVHIWGDCGVRAGPA*LSCRPR
Trigger: TCGTGGCCTACAGCTCAGTCATGCTGGGCCTGCTCT...GACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGATGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp TGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCCGTAACAGACAAGGATaGCGGCAAAGGGCACCGCGA +
Preference number: 4 (lower is better)
Translates to: CSSLGLGVLLRAKSTVAPRNRQG*RQRAPR
Trigger: TCGCGGTGCCCTTTGCCGTCATCCTTGTCTGTTACG...GGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp TCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAATTTCTGGCCAACCTGTaGCTTGGCCCCCACCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSELSPPWHPVHSRPLCKFLANL*LGPHPR
Trigger: CCTGGGGTGGGGGCCAAGTCACAGGTTGGCCAGAAA...TTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp CTGGACTCCAACCTAGGTACCTTGGCAGTACAGCCAGCTACTTGCATGGGAGTCTTTCTGGCCAACCTGTaGCTTGGCCCCCACCCCAGG +
Preference number: 4 (lower is better)
Translates to: LDSNLGTLAVQPATCMGVFLANL*LGPHPR
Trigger: CCTGGGGTGGGGGCCAAGTCACAGGTTGGCCAGAAA...GACTCCCATGCAAGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGAGTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp AGAGTCAGGCACAGAAGCCAACTGGCTTTACAGTGGGGGATGACCTGGGGCCTGACACTGACTGCTGTGTaGCTGGGTAAGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: RVRHRSQLALQWGMTWGLTLTAV*LGKAQP
Trigger: GGGCTGTGCCTTACCCAGTCACACAGCAGTCAGTGT...CAGGCCCCAGGTCATCCCCCACTGTAAAGCCAGTTGGCTTCTGTGCCTGACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp TCCAGACATCGCACTGTGTGGCTCTGTGTGGCGGCAGTGGGGTCACTTCACTTCTCCAAGGTCAGAGCATaGGCTGCACCTCTCCACCCA +
Preference number: 4 (lower is better)
Translates to: SRHRTVWLCVAAVGSLHFSKVRA*AAPLHP
Trigger: TGGGTGGAGAGGTGCAGCTCATGCTCTGACCTTGGA...GAAGTGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp TCCAGACATCGCACTGTGTGGCTCTGTGTGGCGGCAGTGGGGTCACTTCACTTCCCTCACTCTACACGCTaGACCCTGGGCACCATGGAT +
Preference number: 4 (lower is better)
Translates to: SRHRTVWLCVAAVGSLHFPHSTR*TLGTMD
Trigger: ATCCATGGTGCCCAGGGTTCAGCGTGTAGAGTGAGG...GAAGTGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp CCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGAAGTGTTCTGCTCCGCAGAGACCCACGTaGCTGGGAGCCCGGCTACCC +
Preference number: 4 (lower is better)
Translates to: PGPLQLPNINLHRLKCSAPQRPT*LGARLP
Trigger: GGGTAGCCGGGCTCCCAGGCACGTGGGTCTCTGCGG...AGCAGAACACTTCAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR GCA 90 bp GCTGGACTCCAACCTAGGTACCTTGGCAGTACAGCCAGCTACTTGCATGGGAGTGGACCTGGACCGGGCTaGAGGGAACTCTGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: AGLQPRYLGSTASYLHGSGPGPG*RELCGK
Trigger: TTTCCCGCAGAGTTCCCTGCAGCCCGGTCCAGGTCC...ACTCCCATGCAAGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGAGTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp TGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGGATGCTCAGCGCCTaGACGGGTTCCTCACTCATG +
Preference number: 4 (lower is better)
Translates to: CSSLGLGVLLRAKSTVAPRMLSA*TGSSLM
Trigger: CATGAGTGAGGAACCCGTGCAGGCGCTGAGCATCCT...GGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp TGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCGGAGGCCGCATACAGTaGATCAGACACAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: CSSLGLGVLLRAKSTVAPGGRIQ*IRHSQV
Trigger: CACCTGGCTGTGTCTGATGCACTGTATGCGGCCTCC...GGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp AGTATAAGTTACAGCCTCACACTGGCTCCTAGCCCATGGGAGCCTCCAGATGGGGCTGAAGAGCTCGGGTaGCGAGGTGTCGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SISYSLTLAPSPWEPPDGAEELG*RGVVAG
Trigger: ACCTGCCACGACACCTCGGCACCCGAGCTCTTCAGC...CCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACTTATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp ACTTGCATGGGAGTCAGGCCAGGGGTGTCATTGACCTTGAGCTCTTGCCTTTCTGCACCACGGCGATGGTaGGCACGGACTTGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: TCMGVRPGVSLTLSSCLSAPRRW*ARTCAW
Trigger: CCAAGCGCAAGTCCGTGCGCACCATCGCCGTGGTGC...AGAAAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCTGACTCCCATGCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp CTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCGGAGACTGTGGCGTCTaGACAAGTCCTGGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LGVLLRAKSTVAPSPFQTGDCGV*TSPGPL
Trigger: TAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCC...GGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp ACTCAGCCCTCATTACTTACCAGGGTTTTCTGGCCAACCTGTGACTTGGCCCCCGCCCTGACCAGCCCCTaGTCTCCAGGTCAGGATGCT +
Preference number: 4 (lower is better)
Translates to: TQPSLLTRVFWPTCDLAPALTSP*SPGQDA
Trigger: AGCATCCTGACCTGGAGAGCAGGGGCTGGTCAGGGC...GGGGGCCAAGTCACAGGTTGGCCAGAAAACCCTGGTAAGTAATGAGGGCTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp CTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATGTCAGCTGTCCAGCCTaGTTATGGCTCATGCACACC +
Preference number: 4 (lower is better)
Translates to: LLGWGYSSELSPPWHPVHVSCPA*LWLMHT
Trigger: GGTGTGCATGAGCCATAAGCAGGCTGGACAGCTGAC...ATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp GAGCTCCAGACATCGCACTGTGTGGCTCTGTGTGGCGGCAGTGGGGTCACTTCAGAGGCCTGTCAGCTTTaGCCTGTCCCTTTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: ELQTSHCVALCGGSGVTSEACQL*PVPFQR
Trigger: CCTTTGGAAAGGGACAGGGCAAAGCTGACAGGCCTC...TGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp GGGGTCATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCCAGCAAGGTGGGACGTaGATACCAAGGGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GVIQHESLMVHIWGDCGVQQGGT*IPRGQA
Trigger: TGCCTGGCCCCTTGGTATGCACGTCCCACCTTGCTG...GACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGATGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp AGGTGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCAGGGCCCAGCTGATTTaGCTCCATAGCCCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: RWQKGTDWRKDPCVAGESRAQLI*LHSPRP
Trigger: AGGCCGGGGGCTATGGAGGCAAATCAGCTGGGCCCT...GCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp CTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATCCCCAAGTTGCACAGTaGATCAGGGCAGAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LLGWGYSSELSPPWHPVHPQVAQ*IRAEED
Trigger: ATCCTCCTCTGCCCTGATGCACTGTGCAACTTGGGG...ATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp AGCTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTGCACACGCCTGGACCTaGACCGGGCTGCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: SSRLWYVILVSHLPLWACAHAWT*TGLQGT
Trigger: AGTTCCCTGCAGCCCGGTCCAGGTCCAGGCGTGTGC...ACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp GGGGTCATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCATGAATGCACACGCCTaGACCTGGACCGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GVIQHESLMVHIWGDCGVMNAHA*TWTGLQ
Trigger: CTGCAGCCCGGTCCAGGTCCAGGCGTGTGCATTCAT...GACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGATGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp ACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCTCCATGGTGCCGAGGTGTCGTaGCAGGTTACGCGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: TLVCDLGKPPSSLGLFLHGAEVS*QVTRPP
Trigger: CGGGGGCCGCGTAACCTGCCACGACACCTCGGCACC...ATGGAGAAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp CATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCATGGCGTTGAGGGTGTaGCAGCTGAGGTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: HIWGDCGVCTSPGPLQLPMALRV*QLRSSE
Trigger: CTCGCTGGACCTCAGCTGCCACACCCTCAACGCCAT...GGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp GGGGTCATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCGGCCAGTGGGTGGCTTaGCATCTCGGGCAAAGCGTA +
Preference number: 4 (lower is better)
Translates to: GVIQHESLMVHIWGDCGVGQWVA*HLGQSV
Trigger: TACGCTTTGCCCGAGATGCCAAGCCACCCACTGGCC...GACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGATGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp CTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTATCTGGGGAGACTGTaGCGTCTGCACAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LLGWGYSSELSPPWHPVHYLGRL*RLHKSW
Trigger: CCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATA...ATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp CTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCCTGATGGTCCATATCTaGGGAGACTGTGGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: LGVLLRAKSTVAPSPFQTLMVHI*GDCGVC
Trigger: GCAGACGCCACAGTCTCCCCAGATATGGACCATCAG...GGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp CTGGGGCCTGGAGAGAGGATCCCTGATATGAGACTACTCCTGAGACAGCTAGTGCAGTGGGGGATGACCTaGGGCCTGGAGAGAGGATCC +
Preference number: 4 (lower is better)
Translates to: LGPGERIPDMRLLLRQLVQWGMT*GLERGS
Trigger: GGATCCTCTCTCCAGGCCCCAGGTCATCCCCCACTG...CACTAGCTGTCTCAGGAGTAGTCTCATATCAGGGATCCTCTCTCCAGGCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp GCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACTCAGCCCAGTCTGCAGCTGGGCTaGATAATCCCTGGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: AKSTVAPSPFQTTVQTQPSLQLG*IIPGVC
Trigger: GCAGACCCCAGGGATTATCCAGCCCAGCTGCAGACT...GGGCTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GCTGGACTCCAACCTAGGTACCTTGGCAGTACAGCCAGCTACTTGCATGGGAGTCCATCCCAGTCACCCTaGGCAGGAAGAGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: AGLQPRYLGSTASYLHGSPSQSP*AGRAGQ
Trigger: CTGCCCAGCTCTTCCTGCCCAGGGTGACTGGGATGG...ACTCCCATGCAAGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGAGTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GGGGTCATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTCAGAGCTGGGGGCCTaGAGGGTCTTGGAAATGCCC +
Preference number: 4 (lower is better)
Translates to: GVIQHESLMVHIWGDCGVSELGA*RVLEMP
Trigger: GGGCATTTCCAAGACCCTCCAGGCCCCCAGCTCTGA...GACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGATGACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CTCACTCCAAGGTCAGAGCATGAGCTGCACCTCTCCACCCACACCACTTGGGCTAGACATCGCACTGTGTaGCTCTGTGTGGCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LTPRSEHELHLSTHTTWARHRTV*LCVAAV
Trigger: CACTGCCGCCACACAGAGCCACACAGTGCGATGTCT...AGCCCAAGTGGTGTGGGTGGAGAGGTGCAGCTCATGCTCTGACCTTGGAGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp TGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACCCATTGTTCCTGGCTaGGACAGGGCTGAGACTGAC +
Preference number: 4 (lower is better)
Translates to: WGYSSELSPPWHPVHSRPPIVPG*DRAETD
Trigger: GTCAGTCTCAGCCCTGTCCCAGCCAGGAACAATGGG...TGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp GGGGTCATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCCATCCCAGGTGCCATTaGTGGTGTCATTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GVIQHESLMVHIWGDCGVHPRCH*WCHSRG
Trigger: GCCCCTGGAATGACACCATCAATGGCACCTGGGATG...GACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGATGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp CCAGCACATGACTGGCCATCACCTAAACTGGGAAATCTCAAGGACTGGGACTGCCAGGCCCAGCATGACTaGGCTGTAGGCCACGAAGCG +
Preference number: 4 (lower is better)
Translates to: PAHDWPSPKLGNLKDWDCQAQHD*AVGHEA
Trigger: CGCTTCGTGGCCTACAGCTCAGTCATGCTGGGCCTG...GCAGTCCCAGTCCTTGAGATTTCCCAGTTTAGGTGATGGCCAGTCATGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR TCA 90 bp AGTATAAGTTACAGCCTCACACTGGCTCCTAGCCCATGGGAGCCTCCAGATGGGAGTAGAGGGTGCGGGTaGCGTGGAATGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SISYSLTLAPSPWEPPDGSRGCG*RGMAGS
Trigger: GCTTCCTGCCATTCCACGTCACCCGCACCCTCTACT...CCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACTTATACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp TGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCTTCAAGTGGCCTGGGCACTaGGCAGCAAGGTGGGACGTG +
Preference number: 4 (lower is better)
Translates to: WQKGTDWRKDPCVAGESFKWPGH*AARWDV
Trigger: CACGTCCCACCTTGCTGCTCAGTGCCCAGGCCACTT...GAAGCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp CAGGGACCCTGCCCTGATGTCATGCAGTTCATTGAGAACAGCTGCTGCAGGCACGTGATGTCAACTCTGTaGGGGCAGGGCCCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: QGPCPDVMQFIENSCCRHVMSTL*GQGPAD
Trigger: ATCAGCTGGGCCCTGCCCTCACAGAGTTGACATCAC...GTGCCTGCAGCAGCTGTTCTCAATGAACTGCATGACATCAGGGCAGGGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp GCCAGGCAGTCCAACTGGGTTCCAGAGGTGCCCCTGGTTCACCCAGGGTCTCCATGGCAGTTGGGATTTTaGCATATGGATTTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ARQSNWVPEVPLVHPGSPWQLGF*HMDLWG
Trigger: GCCCCACAAATCCATATGTCAAAATCCCAACTGCCA...TGGAGACCCTGGGTGAACCAGGGGCACCTCTGGAACCCAGTTGGACTGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp CATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAGGATGCTCAGCGCCTaGACGGGTTCCTCACTCATG +
Preference number: 4 (lower is better)
Translates to: HIWGDCGVCTSPGPLQLPRMLSA*TGSSLM
Trigger: CATGAGTGAGGAACCCGTGCAGGCGCTGAGCATCCT...GGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp GCTGGACTCCAACCTAGGTACCTTGGCAGTACAGCCAGCTACTTGCATGGGAGTCTCTCCAGGTCAGGATaGTCAGCGCCTGCACGGGTT +
Preference number: 4 (lower is better)
Translates to: AGLQPRYLGSTASYLHGSLSRSG*SAPARV
Trigger: AACCCGTGCAGGCGCTGAGCATCCTGACCTGGAGAG...ACTCCCATGCAAGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGAGTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp ATCCCTGATATGAGACTACTCCTGAGACAGCTAGTGAGAAGGCAGGTGGCAGAAGGGGCCCAGGTCTGCTaGCATCGCCCTGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: IPDMRLLLRQLVRRQVAEGAQVC*HRPAGK
Trigger: CTTCCCTGCAGGGCGATGGCAGCAGACCTGGGCCCC...TTCTGCCACCTGCCTTCTCACTAGCTGTCTCAGGAGTAGTCTCATATCAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311131.6
CDS-3UTR GCA 90 bp CCAGCACATGACTGGCCATCACCTAAACTGGGAAATCTCAAGGACTGGGACTGCGCTGAAGAGCTCGGGTaGCGAGGTGTCGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PAHDWPSPKLGNLKDWDCAEELG*RGVVAG
Trigger: ACCTGCCACGACACCTCGGCACCCGAGCTCTTCAGC...GCAGTCCCAGTCCTTGAGATTTCCCAGTTTAGGTGATGGCCAGTCATGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR GCA 90 bp CGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTCAGTTCTGTCGGATCTaGGCAGGCCCAGCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: RLHKSWSSTASQYKPAQAQFCRI*AGPACG
Trigger: GCCGCAGGCTGGGCCTGCGCAGATCCGACAGAACTG...AGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp ATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCGGGAGGCAGAGAGTTaGAGTGAGCCAAGACCGCAG +
Preference number: 4 (lower is better)
Translates to: MVHIWGDCGVCTSPGPLQREAES*SEPRPQ
Trigger: CTGCGGTCTTGGCTCACTGCAACTCTCTGCCTCCCG...CTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp GGGGTCATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCCGTCACCAAGGCACTTaGTTACATCCAGGCGCCACG +
Preference number: 4 (lower is better)
Translates to: GVIQHESLMVHIWGDCGVRHQGT*LHPGAT
Trigger: CGTGGCGCCTGGATGTAAGCAAGTGCCTTGGTGACG...GACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGATGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp GCCAGGCAGTCCAACTGGGTTCCAGAGGTGCCCCTGGTTCACCCAGGGTCTCCACCTGCCCTGATGTCATaGAGTTCATTGAGAACAGCT +
Preference number: 4 (lower is better)
Translates to: ARQSNWVPEVPLVHPGSPPALMS*SSLRTA
Trigger: AGCTGTTCTCAATGAACTGCATGACATCAGGGCAGG...TGGAGACCCTGGGTGAACCAGGGGCACCTCTGGAACCCAGTTGGACTGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp ACTTGCATGGGAGTCAGGCCAGGGGTGTCATTGACCTTGAGCTCTTGCCTTTCTGCTGCCGTGGGAGGGTaGGAGCTCTCTAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: TCMGVRPGVSLTLSSCLSAAVGG*ELSSLK
Trigger: CTTCAGGCTAGAGAGCTCGCACCCTCCCACGGCAGC...AGAAAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCTGACTCCCATGCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp ATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGAAATGGCTACCCTGCTaGCGTGGGAGGGTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: MVHIWGDCGVCTSPGPLQKWLPC*RGRVRA
Trigger: AGCTCGCACCCTCCCACGGCAGCAGGGTAGCCATTT...CTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp AGGTGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCGAGAAATGGCTACCCTaGTGCCGTGGGAGGGTGCGA +
Preference number: 4 (lower is better)
Translates to: RWQKGTDWRKDPCVAGESEKWLP*CRGRVR
Trigger: TCGCACCCTCCCACGGCAGCAGGGTAGCCATTTCTC...GCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp AGTTACAGCCTCACACTGGCTCCTAGCCCATGGGAGCCTCCAGATGGGTCTATGGGTCAGAGCATGAGCTaGACCTCTCCACCCACACCA +
Preference number: 4 (lower is better)
Translates to: SYSLTLAPSPWEPPDGSMGQSMS*TSPPTP
Trigger: TGGTGTGGGTGGAGAGGTGCAGCTCATGCTCTGACC...CATAGACCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGGCACACGCCTGGACCTaGACCGGGCTGCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: VCTSPGPLQLPNINLHRLAHAWT*TGLQGT
Trigger: AGTTCCCTGCAGCCCGGTCCAGGTCCAGGCGTGTGC...CAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp CGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTCAGGGAAGGGAGGGGTaGGGCCATCAGGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: RLHKSWSSTASQYKPAQAQGREG*GHQGCG
Trigger: GCCACAACCCTGATGGCCCCACCCCTCCCTTCCCTG...AGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311131.6
CDS-3UTR CCA 90 bp CTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACCAGCACCACGGCGATaGTGCGCACGGACTTGCGCT +
Preference number: 4 (lower is better)
Translates to: LWRLHKSWSSTASQYKPAPAPRR*CARTCA
Trigger: AGCGCAAGTCCGTGCGCACCATCGCCGTGGTGCTGG...TGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp TCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAAGCGGGTGACGTGGAATaGCAGGAAGCAGAGGGCGAA +
Preference number: 4 (lower is better)
Translates to: SSELSPPWHPVHSRPLCKAGDVE*QEAEGE
Trigger: TTCGCCCTCTGCTTCCTGCCATTCCACGTCACCCGC...TTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp AGTATAAGTTACAGCCTCACACTGGCTCCTAGCCCATGGGAGCCTCCAGATGGGATGGCGTTGAGGGTGTaGCAGCTGAGGTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: SISYSLTLAPSPWEPPDGMALRV*QLRSSE
Trigger: CTCGCTGGACCTCAGCTGCCACACCCTCAACGCCAT...CCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACTTATACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp ATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGGGCCAGTGGGTGGCTTaGCATCTCGGGCAAAGCGTA +
Preference number: 4 (lower is better)
Translates to: MVHIWGDCGVCTSPGPLQGQWVA*HLGQSV
Trigger: TACGCTTTGCCCGAGATGCCAAGCCACCCACTGGCC...CTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp ACTTGCATGGGAGTCAGGCCAGGGGTGTCATTGACCTTGAGCTCTTGCCTTTCTGCTGGGGCCAGTGGGTaGCTTGGCATCTCGGGCAAA +
Preference number: 4 (lower is better)
Translates to: TCMGVRPGVSLTLSSCLSAGASG*LGISGK
Trigger: TTTGCCCGAGATGCCAAGCCACCCACTGGCCCCAGC...AGAAAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCTGACTCCCATGCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp TGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCATATCTGGGGAGACTGTaGCGTCTGCACAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: WGYSSELSPPWHPVHSRPYLGRL*RLHKSW
Trigger: CCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATA...TGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp CATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGCCAACCTGTGACTTaGCCCCCACCCCAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: HESLMVHIWGDCGVCTSPGQPVT*PPPQVA
Trigger: AGCTACCTGGGGTGGGGGCCAAGTCACAGGTTGGCC...AGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp CTGGACTCCAACCTAGGTACCTTGGCAGTACAGCCAGCTACTTGCATGGGAGTCCTGGCTCCTAGCCCATaGGAGCCTCCAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: LDSNLGTLAVQPATCMGVLAPSP*EPPDGS
Trigger: AGACCCATCTGGAGGCTCCCATGGGCTAGGAGCCAG...GACTCCCATGCAAGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGAGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp GAGCCTGGAGTCAGCTGTCCAGCCTGCTTATGGCTCATGCACACCCTGCCCTCTGAAAGGACCCTTGTGTaGCTGGTGAAAGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: EPGVSCPACLWLMHTLPSERTLV*LVKASL
Trigger: CAGGGAAGCTTTCACCAGCCACACAAGGGTCCTTTC...AGAGGGCAGGGTGTGCATGAGCCATAAGCAGGCTGGACAGCTGACTCCAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp ACTCAGCCCTCATTACTTACCAGGGTTTTCTGGCCAACCTGTGACTTGGCCCCCGAGGGAGCCCTAACTTaGCCTCCTTGTGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: TQPSLLTRVFWPTCDLAPEGALT*PPCDPA
Trigger: GGCTGGGTCACAAGGAGGCCAAGTTAGGGCTCCCTC...GGGGGCCAAGTCACAGGTTGGCCAGAAAACCCTGGTAAGTAATGAGGGCTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GGGGTCATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTGTGTCCTTGTGGAGTaGCTCGGGCCTGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GVIQHESLMVHIWGDCGVCVLVE*LGPVGK
Trigger: CTTTCCCACAGGCCCGAGCCACTCCACAAGGACACA...GACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGATGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp TGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCAAGGGTGCGTGGGACATaGGTCAATACACGACTTCCC +
Preference number: 4 (lower is better)
Translates to: WGYSSELSPPWHPVHSRPRVRGT*VNTRLP
Trigger: GGGAAGTCGTGTATTGACCCATGTCCCACGCACCCT...TGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp ACTTGCATGGGAGTCAGGCCAGGGGTGTCATTGACCTTGAGCTCTTGCCTTTCTCCTAGTCCTCAGAGCTaGGGGCCTGGAGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: TCMGVRPGVSLTLSSCLSPSPQS*GPGGSW
Trigger: CCAAGACCCTCCAGGCCCCCAGCTCTGAGGACTAGG...AGAAAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCTGACTCCCATGCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp AGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACTCAGGTCAGGCCCCTGCACTaGGCTCACTCCAAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: RAKSTVAPSPFQTTVQTQVRPLH*AHSKVR
Trigger: TCTGACCTTGGAGTGAGCCCAGTGCAGGGGCCTGAC...CTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GAGCCTGGAGTCAGCTGTCCAGCCTGCTTATGGCTCATGCACACCCTGCCCTCTGTGTGGACTGATGTTTaGAGAGTTCTGTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: EPGVSCPACLWLMHTLPSVWTDV*RVLCRG
Trigger: CCCCCTGCACAGAACTCTCCAAACATCAGTCCACAC...AGAGGGCAGGGTGTGCATGAGCCATAAGCAGGCTGGACAGCTGACTCCAGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CAA 72 bp TCCAGCCTGCTTATGGCTCATGCACACCCTGCCCTCTaGCCCCATGTCTTTGCCTGGGATGCATCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SSLLMAHAHPAL*PHVFAWDASCV
Trigger: CACACAGGATGCATCCCAGGCAAAGACATGGGGCAAGAGGGCAGGGTGTGCATGAGCCATAAGCAGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp ACTCAGCCCTCATTACTTACCAGGGTTTTCTGGCCAACCTGTGACTTGGCCCCCCATCCCAGGTGCCATTaGTGGTGTCATTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TQPSLLTRVFWPTCDLAPHPRCH*WCHSRG
Trigger: GCCCCTGGAATGACACCATCAATGGCACCTGGGATG...GGGGGCCAAGTCACAGGTTGGCCAGAAAACCCTGGTAAGTAATGAGGGCTGAGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp CTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCCCAGCATGACTaGGCTGTAGGCCACGAAGCG +
Preference number: 4 (lower is better)
Translates to: LWRLHKSWSSTASQYKPAQAQHD*AVGHEA
Trigger: CGCTTCGTGGCCTACAGCTCAGTCATGCTGGGCCTG...TGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp GTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGCAGGCCCAGCATGACTaGGCTGTAGGCCACGAAGCG +
Preference number: 4 (lower is better)
Translates to: VCTSPGPLQLPNINLHRLQAQHD*AVGHEA
Trigger: CGCTTCGTGGCCTACAGCTCAGTCATGCTGGGCCTG...CAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp ACTCAGCCCTCATTACTTACCAGGGTTTTCTGGCCAACCTGTGACTTGGCCCCCGCAGTCGCCGAGCCATaGGCACGTAACAGACAAGGA +
Preference number: 4 (lower is better)
Translates to: TQPSLLTRVFWPTCDLAPAVAEP*ARNRQG
Trigger: TCCTTGTCTGTTACGTGCTCATGGCTCGGCGACTGC...GGGGGCCAAGTCACAGGTTGGCCAGAAAACCCTGGTAAGTAATGAGGGCTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp CATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTTGGGTCTCTGTCACATaGGGGCGCTGTGGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: HESLMVHIWGDCGVCTSPWVSVT*GRCGVR
Trigger: CCTGACTCCACAGCGCCCTCATGTGACAGAGACCCA...AGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp CACAGAGTGAATATCCTGAGCCCCTGTCAAATGACGGAGCATGGGGTCATCCAGTGCCCTGCAGGGCTGTaGGTGTCGTGGGGCACTATA +
Preference number: 4 (lower is better)
Translates to: HRVNILSPCQMTEHGVIQCPAGL*VSWGTI
Trigger: TATAGTGCCCCACGACACTCACAGCCCTGCAGGGCA...CTGGATGACCCCATGCTCCGTCATTTGACAGGGGCTCAGGATATTCACTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp AGTTACAGCCTCACACTGGCTCCTAGCCCATGGGAGCCTCCAGATGGGTCTATGGAGAAGGCAGGCAAGTaGCCTCAGGTCACACAGCAA +
Preference number: 4 (lower is better)
Translates to: SYSLTLAPSPWEPPDGSMEKAGK*PQVTQQ
Trigger: TTGCTGTGTGACCTGAGGTCACTTGCCTGCCTTCTC...CATAGACCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp CTGATTTGCCTCCATAGCCCCCGGCCTGGTGCCAGGCATATAAATGCTGACCACAAGAGCCCCAGGAAATaGCATCAGGGTGGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: LICLHSPRPGARHINADHKSPRK*HQGGEV
Trigger: TACCTCCCCACCCTGATGTCATTTCCTGGGGCTCTT...GTGGTCAGCATTTATATGCCTGGCACCAGGCCGGGGGCTATGGAGGCAAATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp ACTCAGCCCTCATTACTTACCAGGGTTTTCTGGCCAACCTGTGACTTGGCCCCCATGGTGGAAAGAGGGTaGGGAGCTCTCTGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: TQPSLLTRVFWPTCDLAPMVERG*GALWGP
Trigger: TGGACCCCAGAGAGCTCCTCACCCTCTTTCCACCAT...GGGGGCCAAGTCACAGGTTGGCCAGAAAACCCTGGTAAGTAATGAGGGCTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp ATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGGCTGCTCTGTCACCCTaGGTTCAGTCACAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: MVHIWGDCGVCTSPGPLQAALSP*VQSQSA
Trigger: CGCTGACTGTGACTGAACTCAGGGTGACAGAGCAGC...CTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp CTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTGGCTCCTCTCGCCACTaGGCTGCGCTTCTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: LQTLVCDLGKPPSSLGLFGSSRH*AALLLS
Trigger: TGAGAGGAGAAGCGCAGCGCAGTGGCGAGAGGAGCC...AAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR GCA 90 bp CCAAACAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTTGTCTCTCCAGGTCAGGATaGTCAGCGCCTGCACGGGTT +
Preference number: 4 (lower is better)
Translates to: PNNPWGPCQEGKLIPTGCLSRSG*SAPARV
Trigger: AACCCGTGCAGGCGCTGAGCATCCTGACCTGGAGAG...ACAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp ATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGGGAGGCCGCATACAGTaGATCAGACACAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: MVHIWGDCGVCTSPGPLQGGRIQ*IRHSQV
Trigger: CACCTGGCTGTGTCTGATGCACTGTATGCGGCCTCC...CTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp CAGTTGACTCTGGACCACAGAGTGAATATCCTGAGCCCCTGTCAAATGACGGAGGCTGAAGAGCTCGGGTaGCGAGGTGTCGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QLTLDHRVNILSPCQMTEAEELG*RGVVAG
Trigger: ACCTGCCACGACACCTCGGCACCCGAGCTCTTCAGC...CTCCGTCATTTGACAGGGGCTCAGGATATTCACTCTGTGGTCCAGAGTCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp ATCCCTGATATGAGACTACTCCTGAGACAGCTAGTGAGAAGGCAGGTGGCAGAAGCACCACGGCGATGGTaGGCACGGACTTGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: IPDMRLLLRQLVRRQVAEAPRRW*ARTCAW
Trigger: CCAAGCGCAAGTCCGTGCGCACCATCGCCGTGGTGC...TTCTGCCACCTGCCTTCTCACTAGCTGTCTCAGGAGTAGTCTCATATCAGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR GCA 90 bp CCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGAAGTGTTCTGCTCAGTTCTGTCGGATCTaGGCAGGCCCAGCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: PGPLQLPNINLHRLKCSAQFCRI*AGPACG
Trigger: GCCGCAGGCTGGGCCTGCGCAGATCCGACAGAACTG...AGCAGAACACTTCAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp AGTTACAGCCTCACACTGGCTCCTAGCCCATGGGAGCCTCCAGATGGGTCTATGGGAGACTGTGGCGTCTaGACAAGTCCTGGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: SYSLTLAPSPWEPPDGSMGDCGV*TSPGPL
Trigger: TAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCC...CATAGACCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp CTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCAGCCCTGACCAGCCCCTaGTCTCCAGGTCAGGATGCT +
Preference number: 4 (lower is better)
Translates to: LWRLHKSWSSTASQYKPAALTSP*SPGQDA
Trigger: AGCATCCTGACCTGGAGAGCAGGGGCTGGTCAGGGC...TGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp AGGTGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCATCCCCTCACGTCACTaGTGGACAATGGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RWQKGTDWRKDPCVAGESIPSRH*WTMVWG
Trigger: GCCCCAGACCATTGTCCAGCAGTGACGTGAGGGGAT...GCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp CTGGACTCCAACCTAGGTACCTTGGCAGTACAGCCAGCTACTTGCATGGGAGTCGTGTGCCAGGGACCCTaGCCTGATGTCATGCAGTTC +
Preference number: 4 (lower is better)
Translates to: LDSNLGTLAVQPATCMGVVCQGP*PDVMQF
Trigger: GAACTGCATGACATCAGGGCAGGGTCCCTGGCACAC...GACTCCCATGCAAGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGAGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp ATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACATCCCCATTTGCTGCCTaGCCTTGCCCAGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: IQHESLMVHIWGDCGVCTSPFAA*PCPAPD
Trigger: GTCTGGAGCTGGGCAAGGGCAGGCAGCAAATGGGGA...TGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp CATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGAGGGTCTTGGAAATaGCCGGGGAGCAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: HESLMVHIWGDCGVCTSPGGSWK*PGSSCW
Trigger: CCAACAGCTGCTCCCCGGGCATTTCCAAGACCCTCC...AGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp ATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGGCTGGGGAGAAACACTaGCTCCACCCTAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: MVHIWGDCGVCTSPGPLQAGEKH*LHPSPQ
Trigger: CTGAGGACTAGGGTGGAGGCAGTGTTTCTCCCCAGC...CTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp ATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACACCACACCACTTGGGCTaGTATCCCAGGTGCCCATCC +
Preference number: 4 (lower is better)
Translates to: IQHESLMVHIWGDCGVCTPHHLG*YPRCPS
Trigger: GGATGGGCACCTGGGATAGCAGCCCAAGTGGTGTGG...TGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp GCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACTCAGCCCCCCATTCATGAGGGCTaGACCCTTAGGACCTGGTTA +
Preference number: 4 (lower is better)
Translates to: AKSTVAPSPFQTTVQTQPPIHEG*TLRTWL
Trigger: TAACCAGGTCCTAAGGGTGCAGCCCTCATGAATGGG...GGGCTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp AGCTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTACTGTGCCAGAGCCCTaGTCCTGCATCAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SSRLWYVILVSHLPLWACTVPEP*SCISCP
Trigger: AGGGCAGCTGATGCAGGAGCAGGGCTCTGGCACAGT...ACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGCGGGTGACGTGGAATaGCAGGAAGCAGAGGGCGAA +
Preference number: 4 (lower is better)
Translates to: HESLMVHIWGDCGVCTSPAGDVE*QEAEGE
Trigger: TTCGCCCTCTGCTTCCTGCCATTCCACGTCACCCGC...AGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp AGCTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTGCGGGTGACGTGGAATaGCAGGAAGCAGAGGGCGAA +
Preference number: 4 (lower is better)
Translates to: SSRLWYVILVSHLPLWACAGDVE*QEAEGE
Trigger: TTCGCCCTCTGCTTCCTGCCATTCCACGTCACCCGC...ACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp ACTTGCATGGGAGTCAGGCCAGGGGTGTCATTGACCTTGAGCTCTTGCCTTTCTATGGCGTTGAGGGTGTaGCAGCTGAGGTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: TCMGVRPGVSLTLSSCLSMALRV*QLRSSE
Trigger: CTCGCTGGACCTCAGCTGCCACACCCTCAACGCCAT...AGAAAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCTGACTCCCATGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp TGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCTTCGGCCAGTGGGTGGCTTaGCATCTCGGGCAAAGCGTA +
Preference number: 4 (lower is better)
Translates to: WQKGTDWRKDPCVAGESFGQWVA*HLGQSV
Trigger: TACGCTTTGCCCGAGATGCCAAGCCACCCACTGGCC...GAAGCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp GGACCCAGAAGAGGAGTGATGAAGGTCCTCACAGCATGGGGGAAGAGGACAGGTTATCTGGGGAGACTGTaGCGTCTGCACAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GPRRGVMKVLTAWGKRTGYLGRL*RLHKSW
Trigger: CCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATA...ACCTGTCCTCTTCCCCCATGCTGTGAGGACCTTCATCACTCCTCTTCTGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp ACTCAGCCCTCATTACTTACCAGGGTTTTCTGGCCAACCTGTGACTTGGCCCCCAGCCAGCTACTTGCATaGGAGTCAGGCCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: TQPSLLTRVFWPTCDLAPSQLLA*ESGQGC
Trigger: ACACCCCTGGCCTGACTCCCATGCAAGTAGCTGGCT...GGGGGCCAAGTCACAGGTTGGCCAGAAAACCCTGGTAAGTAATGAGGGCTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp GTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGGGCCAACCTGTGACTTaGCCCCCACCCCAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: VCTSPGPLQLPNINLHRLGQPVT*PPPQVA
Trigger: AGCTACCTGGGGTGGGGGCCAAGTCACAGGTTGGCC...CAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp CACAGAGTGAATATCCTGAGCCCCTGTCAAATGACGGAGCATGGGGTCATCCAGCTGGCTCCTAGCCCATaGGAGCCTCCAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: HRVNILSPCQMTEHGVIQLAPSP*EPPDGS
Trigger: AGACCCATCTGGAGGCTCCCATGGGCTAGGAGCCAG...CTGGATGACCCCATGCTCCGTCATTTGACAGGGGCTCAGGATATTCACTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp ATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGGTTACAGCCTCACACTaGCTCCTAGCCCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: MVHIWGDCGVCTSPGPLQVTASH*LLAHGS
Trigger: GCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAAC...CTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp CTGGACTCCAACCTAGGTACCTTGGCAGTACAGCCAGCTACTTGCATGGGAGTCCAACTGGCTTTACAGTaGGGGATGACCTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LDSNLGTLAVQPATCMGVQLALQ*GMTWGL
Trigger: CAGGCCCCAGGTCATCCCCCACTGTAAAGCCAGTTG...GACTCCCATGCAAGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGAGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp AGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACTCAGCAACTGGCTTTACAGTaGGGGATGACCTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RAKSTVAPSPFQTTVQTQQLALQ*GMTWGL
Trigger: CAGGCCCCAGGTCATCCCCCACTGTAAAGCCAGTTG...CTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp CTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCGGCCATCACCTAAACTaGGAAATCTCAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: LGVLLRAKSTVAPSPFQTGHHLN*EISRTG
Trigger: CCCAGTCCTTGAGATTTCCCAGTTTAGGTGATGGCC...GGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp GCCAGGCAGTCCAACTGGGTTCCAGAGGTGCCCCTGGTTCACCCAGGGTCTCCAGTCTGGGGCCAGGAGTaGAAAATTATGGTCTTACTT +
Preference number: 4 (lower is better)
Translates to: ARQSNWVPEVPLVHPGSPVWGQE*KIMVLL
Trigger: AAGTAAGACCATAATTTTCCACTCCTGGCCCCAGAC...TGGAGACCCTGGGTGAACCAGGGGCACCTCTGGAACCCAGTTGGACTGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GGACCCAGAAGAGGAGTGATGAAGGTCCTCACAGCATGGGGGAAGAGGACAGGTGGTCTGCTCAGTGGATaGGCAACTCACGTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: GPRRGVMKVLTAWGKRTGGLLSG*ATHVPF
Trigger: AAAGGGCACGTGAGTTGCCCATCCACTGAGCAGACC...ACCTGTCCTCTTCCCCCATGCTGTGAGGACCTTCATCACTCCTCTTCTGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp ACTTGCATGGGAGTCAGGCCAGGGGTGTCATTGACCTTGAGCTCTTGCCTTTCTCCAGTCAGGGAGAAATaGCTACCCTGCTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: TCMGVRPGVSLTLSSCLSPVREK*LPCCRG
Trigger: CCCACGGCAGCAGGGTAGCCATTTCTCCCTGACTGG...AGAAAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCTGACTCCCATGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GCCAAACAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTTGCAGGAATTCCCCCATTaGAGGAGGAGTGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: AKQSLGSLPGGKTHSNWLQEFPH*RRSGQA
Trigger: TGCCTGGCCACTCCTCCTCCAATGGGGGAATTCCTG...CAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CTCACTCCAAGGTCAGAGCATGAGCTGCACCTCTCCACCCACACCACTTGGGCTCAGGGCAAAGAGGCTTaGAAACTAGGGGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LTPRSEHELHLSTHTTWAQGKEA*KLGAGD
Trigger: ATCTCCTGCCCCTAGTTTCCAAGCCTCTTTGCCCTG...AGCCCAAGTGGTGTGGGTGGAGAGGTGCAGCTCATGCTCTGACCTTGGAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CAA 72 bp TGGCTCATGCACACCCTGCCCTCTTGCCCCATGTCTTaGCCTGGGATGCATCCTGTGTGTGGATGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: WLMHTLPSCPMS*PGMHPVCGCSS
Trigger: GGAAGAACATCCACACACAGGATGCATCCCAGGCAAAGACATGGGGCAAGAGGGCAGGGTGTGCATGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CAA 72 bp GGGCGCTGTGGAGTCAGGCTCCAAATACAGCAAGCTTaGGGGATGTCCTGCCTTTCACAAGGCAGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: GRCGVRLQIQQA*GMSCLSQGRVG
Trigger: TCCCACTCTGCCTTGTGAAAGGCAGGACATCCCCAAAGCTTGCTGTATTTGGAGCCTGACTCCACAGCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CAA 72 bp CAAGTGACCTCAGGTCACACAGCAAAAACTCCCCATTaGCTGCCTGCCCTTGCCCAGCTCCAGACCAGTCCT +
Preference number: 4 (lower is better)
Translates to: QVTSGHTAKTPH*LPALAQLQTSP
Trigger: AGGACTGGTCTGGAGCTGGGCAAGGGCAGGCAGCAAATGGGGAGTTTTTGCTGTGTGACCTGAGGTCACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp GGGAAGAGGACAGGTGAGCATTCAATTAAGCAGGCGATGGAAATCTTAAACCTGCGCGCGCGCTGGTGGTaGCAAAGTAGAGCACGGGGG +
Preference number: 4 (lower is better)
Translates to: GKRTGEHSIKQAMEILNLRARWW*QSRARG
Trigger: CCCCCGTGCTCTACTTTGTCACCACCAGCGCGCGCG...CAGGTTTAAGATTTCCATCGCCTGCTTAATTGAATGCTCACCTGTCCTCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp AGCATGGGTGGGAGGAAAATCAAACAGTTGCATGTTTGTGCCTCACTGCATTGTAGGCCACGAAGCGGCTaGAGAGCTCGGGTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SMGGRKIKQLHVCASLHCRPRSG*RARVPR
Trigger: CCTCGGCACCCGAGCTCTTCAGCCGCTTCGTGGCCT...ACAATGCAGTGAGGCACAAACATGCAACTGTTTGATTTTCCTCCCACCCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp TGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCTTCGCAGTCGCCGAGCCATaGGCACGTAACAGACAAGGA +
Preference number: 4 (lower is better)
Translates to: WQKGTDWRKDPCVAGESFAVAEP*ARNRQG
Trigger: TCCTTGTCTGTTACGTGCTCATGGCTCGGCGACTGC...GAAGCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR TCA 90 bp AGAGTCAGGCACAGAAGCCAACTGGCTTTACAGTGGGGGATGACCTGGGGCCTGTGGAGAGAGGATCCCTaGTATGAGACTACTCCTGAG +
Preference number: 4 (lower is better)
Translates to: RVRHRSQLALQWGMTWGLWREDP*YETTPE
Trigger: CTCAGGAGTAGTCTCATATCAGGGATCCTCTCTCCA...CAGGCCCCAGGTCATCCCCCACTGTAAAGCCAGTTGGCTTCTGTGCCTGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR TCA 90 bp CTCACTCCAAGGTCAGAGCATGAGCTGCACCTCTCCACCCACACCACTTGGGCTAGAACCTATCATAGGTaGGACCCATCTCCCCCATAC +
Preference number: 4 (lower is better)
Translates to: LTPRSEHELHLSTHTTWARTYHR*DPSPPY
Trigger: GTATGGGGGAGATGGGTCTCACCTATGATAGGTTCT...AGCCCAAGTGGTGTGGGTGGAGAGGTGCAGCTCATGCTCTGACCTTGGAGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp GCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACTCAGCCCTGGTTGTGCCTTCACTaGGGTGGGGAAATTGGAACA +
Preference number: 4 (lower is better)
Translates to: AKSTVAPSPFQTTVQTQPWLCLH*GGEIGT
Trigger: TGTTCCAATTTCCCCACCTCAGTGAAGGCACAACCA...GGGCTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp AGTTACAGCCTCACACTGGCTCCTAGCCCATGGGAGCCTCCAGATGGGTCTATGCCCAGGAGTCTCACGTaGTGTTTCACAATGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SYSLTLAPSPWEPPDGSMPRSLT*CFTMAF
Trigger: GAAGGCCATTGTGAAACATCACGTGAGACTCCTGGG...CATAGACCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp ACTCAGCCCTCATTACTTACCAGGGTTTTCTGGCCAACCTGTGACTTGGCCCCCAGAATTGGTGATGGCTaGACTGTGCCAGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TQPSLLTRVFWPTCDLAPRIGDG*TVPEPC
Trigger: GCAGGGCTCTGGCACAGTTCAGCCATCACCAATTCT...GGGGGCCAAGTCACAGGTTGGCCAGAAAACCCTGGTAAGTAATGAGGGCTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp CTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACTCTCCAGGTCAGGATaGTCAGCGCCTGCACGGGTT +
Preference number: 4 (lower is better)
Translates to: LWRLHKSWSSTASQYKPALSRSG*SAPARV
Trigger: AACCCGTGCAGGCGCTGAGCATCCTGACCTGGAGAG...TGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp CCAGCACATGACTGGCCATCACCTAAACTGGGAAATCTCAAGGACTGGGACTGCGGAGGCCGCATACAGTaGATCAGACACAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PAHDWPSPKLGNLKDWDCGGRIQ*IRHSQV
Trigger: CACCTGGCTGTGTCTGATGCACTGTATGCGGCCTCC...GCAGTCCCAGTCCTTGAGATTTCCCAGTTTAGGTGATGGCCAGTCATGTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR GCA 90 bp AGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCTCCACTGGGTTCCAGAGGTaGCCCTGGTTCACCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RLWYVILVSHLPLWACFSTGFQR*PWFTQG
Trigger: ACCCTGGGTGAACCAGGGGCACCTCTGGAACCCAGT...GGAGAAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGATGAATGCACACGCCTaGACCTGGACCGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VCTSPGPLQLPNINLHRLMNAHA*TWTGLQ
Trigger: CTGCAGCCCGGTCCAGGTCCAGGCGTGTGCATTCAT...CAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp CGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGGAACCTCCAAGCTCTaGAACCTGACCAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: RLHKSWSSTASQYKPAQAGTSKL*NLTSPC
Trigger: GCAGGGGCTGGTCAGGTTCCAGAGCTTGGAGGTTCC...AGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311131.6
CDS-3UTR CCA 90 bp CTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATGGTGGAACATATATGTaGTGGACGCATTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LLGWGYSSELSPPWHPVHGGTYM*WTHSRS
Trigger: AGACCTGGAATGCGTCCACCACATATATGTTCCACC...ATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp CTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCTCAGACACAGCCAGGTaGAACATATATGTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: LGVLLRAKSTVAPSPFQTSDTAR*NIYVVD
Trigger: GTCCACCACATATATGTTCCACCTGGCTGTGTCTGA...GGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp AGTTACAGCCTCACACTGGCTCCTAGCCCATGGGAGCCTCCAGATGGGTCTATGCGTCTGCACAAGTCCTaGTCCTCTACAGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: SYSLTLAPSPWEPPDGSMRLHKS*SSTASQ
Trigger: TTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACG...CATAGACCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp GCTGGACTCCAACCTAGGTACCTTGGCAGTACAGCCAGCTACTTGCATGGGAGTCTGATGGTCCATATCTaGGGAGACTGTGGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: AGLQPRYLGSTASYLHGSLMVHI*GDCGVC
Trigger: GCAGACGCCACAGTCTCCCCAGATATGGACCATCAG...ACTCCCATGCAAGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGAGTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp GCCAAACAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTTGCTGATGGTCCATATCTaGGGAGACTGTGGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: AKQSLGSLPGGKTHSNWLLMVHI*GDCGVC
Trigger: GCAGACGCCACAGTCTCCCCAGATATGGACCATCAG...CAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp TCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAAGAGCTAAGTCCACCGTaGCACCCAGTCCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: SSELSPPWHPVHSRPLCKELSPP*HPVHSR
Trigger: TCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTC...TTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp CATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCGTTCATCTCTTGGGCTaGGGGTACTCCTCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: HIWGDCGVCTSPGPLQLPVHLLG*GYSSEL
Trigger: TAGCTCTGAGGAGTACCCCCAGCCCAAGAGATGAAC...GGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp GGACCCAGAAGAGGAGTGATGAAGGTCCTCACAGCATGGGGGAAGAGGACAGGTGTTCATCTCTTGGGCTaGGGGTACTCCTCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: GPRRGVMKVLTAWGKRTGVHLLG*GYSSEL
Trigger: TAGCTCTGAGGAGTACCCCCAGCCCAAGAGATGAAC...ACCTGTCCTCTTCCCCCATGCTGTGAGGACCTTCATCACTCCTCTTCTGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CACAGAGTGAATATCCTGAGCCCCTGTCAAATGACGGAGCATGGGGTCATCCAGGTTACAGCCTCACACTaGCTCCTAGCCCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: HRVNILSPCQMTEHGVIQVTASH*LLAHGS
Trigger: GCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAAC...CTGGATGACCCCATGCTCCGTCATTTGACAGGGGCTCAGGATATTCACTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp CAGGGACCCTGCCCTGATGTCATGCAGTTCATTGAGAACAGCTGCTGCAGGCACTTTCACAAGGCAGAGTaGGAAGGGTGGAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: QGPCPDVMQFIENSCCRHFHKAE*EGWRGQ
Trigger: CTGACCTCTCCACCCTTCCCACTCTGCCTTGTGAAA...GTGCCTGCAGCAGCTGTTCTCAATGAACTGCATGACATCAGGGCAGGGTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GGGGTCATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCCACATGAGGGCGCTGTaGAGTCAGGCTCCAAATACA +
Preference number: 4 (lower is better)
Translates to: GVIQHESLMVHIWGDCGVHMRAL*SQAPNT
Trigger: TGTATTTGGAGCCTGACTCCACAGCGCCCTCATGTG...GACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGATGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CCAAACAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTTGTGTCACTGCTGGACAATaGTCTGGGGCCAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: PNNPWGPCQEGKLIPTGCVTAGQ*SGARSG
Trigger: TCCACTCCTGGCCCCAGACCATTGTCCAGCAGTGAC...ACAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GGGGTCATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCGACACTGAGGTGGTCTaGGTGGAGCATCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: GVIQHESLMVHIWGDCGVDTEVV*VEHLCS
Trigger: AGAACACAGATGCTCCACCCAGACCACCTCAGTGTC...GACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGATGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp TATGATATTAGTCCCCAGATGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCGCTACCCTGCTGCCGTaGGAGGGTGCGAGCTCTCTA +
Preference number: 4 (lower is better)
Translates to: YDISPQMFISWAGGTPQSATLLP*EGASSL
Trigger: TAGAGAGCTCGCACCCTCCCACGGCAGCAGGGTAGC...GCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACATCTGGGGACTAATATCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CAGGGACCCTGCCCTGATGTCATGCAGTTCATTGAGAACAGCTGCTGCAGGCACAAGTCCTATCGAAGATaGGGAAAGCGAGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: QGPCPDVMQFIENSCCRHKSYRR*GKRGPE
Trigger: CTCTGGGCCTCGCTTTCCCCATCTTCGATAGGACTT...GTGCCTGCAGCAGCTGTTCTCAATGAACTGCATGACATCAGGGCAGGGTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp TCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAAAAGGTCCTCACAGCATaGGGGAAGAGGACAGGTGAG +
Preference number: 4 (lower is better)
Translates to: SSELSPPWHPVHSRPLCKKVLTA*GKRTGE
Trigger: CTCACCTGTCCTCTTCCCCCATGCTGTGAGGACCTT...TTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp TGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCACAGCACACACTGTGTaGACTAAGGTGGCAGGCTTT +
Preference number: 4 (lower is better)
Translates to: CSSLGLGVLLRAKSTVAPTAHTV*TKVAGF
Trigger: AAAGCCTGCCACCTTAGTCCACACAGTGTGTGCTGT...GGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp TCCATTCCAGACCACTGTGCAAACTCAGCCCTCATTACTTACCAGGGTTTTCTGCCAAGCTCTGGAACCTaGCCAGCCCCTGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SIPDHCANSALITYQGFLPSSGT*PAPALQ
Trigger: CTGGAGAGCAGGGGCTGGTCAGGTTCCAGAGCTTGG...CAGAAAACCCTGGTAAGTAATGAGGGCTGAGTTTGCACAGTGGTCTGGAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311131.6
CDS-3UTR TCA 90 bp AGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACTCAGACGCATTCCAGGTCTTaGGGCGGCACAAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: RAKSTVAPSPFQTTVQTQTHSRS*GGTRRC
Trigger: ACATCTTCTTGTGCCGCCTCAAGACCTGGAATGCGT...CTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp TATGATATTAGTCCCCAGATGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCAGAGCAGGCCCAGCATaGCTGAGCTGTAGGCCACGA +
Preference number: 4 (lower is better)
Translates to: YDISPQMFISWAGGTPQSRAGPA*LSCRPR
Trigger: TCGTGGCCTACAGCTCAGTCATGCTGGGCCTGCTCT...GCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACATCTGGGGACTAATATCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp CTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCGTAACAGACAAGGATaGCGGCAAAGGGCACCGCGA +
Preference number: 4 (lower is better)
Translates to: LQTLVCDLGKPPSSLGLFRNRQG*RQRAPR
Trigger: TCGCGGTGCCCTTTGCCGTCATCCTTGTCTGTTACG...AAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp CCAGCACATGACTGGCCATCACCTAAACTGGGAAATCTCAAGGACTGGGACTGCCCCTTGTGTGGCTGGTaGAAGCTTCCCTGCCATATC +
Preference number: 4 (lower is better)
Translates to: PAHDWPSPKLGNLKDWDCPLCGW*KLPCHI
Trigger: GATATGGCAGGGAAGCTTTCACCAGCCACACAAGGG...GCAGTCCCAGTCCTTGAGATTTCCCAGTTTAGGTGATGGCCAGTCATGTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR TCA 90 bp CACAGAGTGAATATCCTGAGCCCCTGTCAAATGACGGAGCATGGGGTCATCCAGGACTGGGACTGCACCTaGCTTTTCTCTGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: HRVNILSPCQMTEHGVIQDWDCT*LFSVLS
Trigger: GCTGAGCACAGAGAAAAGTCAGGTGCAGTCCCAGTC...CTGGATGACCCCATGCTCCGTCATTTGACAGGGGCTCAGGATATTCACTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR TCA 90 bp CCAAACAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTTGTCACAGGATTAGATGGTaGACGAGCCCCTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: PNNPWGPCQEGKLIPTGCHRIRW*TSPSCV
Trigger: GACACAGGAGGGGCTCGTTCACCATCTAATCCTGTG...ACAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp ATCCCTGATATGAGACTACTCCTGAGACAGCTAGTGAGAAGGCAGGTGGCAGAACCCAGAGAGGGACAGTaGCTCCCCCAAGTTGCACAG +
Preference number: 4 (lower is better)
Translates to: IPDMRLLLRQLVRRQVAEPREGQ*LPQVAQ
Trigger: CTGTGCAACTTGGGGGAGTCACTGTCCCTCTCTGGG...TTCTGCCACCTGCCTTCTCACTAGCTGTCTCAGGAGTAGTCTCATATCAGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp CCAGCACATGACTGGCCATCACCTAAACTGGGAAATCTCAAGGACTGGGACTGCGCTAATGAAGTTGGCTaGGGCAGTGGGAGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: PAHDWPSPKLGNLKDWDCANEVG*GSGSSQ
Trigger: TTGGCTGCTCCCACTGCCTCAGCCAACTTCATTAGC...GCAGTCCCAGTCCTTGAGATTTCCCAGTTTAGGTGATGGCCAGTCATGTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp TGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCTTCCAGGAAGCTCAGTGGTaGGCTCTCACCACTGTAGCT +
Preference number: 4 (lower is better)
Translates to: WQKGTDWRKDPCVAGESFQEAQW*ALTTVA
Trigger: AGCTACAGTGGTGAGAGCTCACCACTGAGCTTCCTG...GAAGCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp CTTGACCTGGAGCAACCATGTGTGGATAACATGTTGCTTAGGGCCTCTTCTAACGGACCTGGACCGGGCTaGAGGGAACTCTGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: LDLEQPCVDNMLLRASSNGPGPG*RELCGK
Trigger: TTTCCCGCAGAGTTCCCTGCAGCCCGGTCCAGGTCC...GTTAGAAGAGGCCCTAAGCAACATGTTATCCACACATGGTTGCTCCAGGTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp CTGGACTCCAACCTAGGTACCTTGGCAGTACAGCCAGCTACTTGCATGGGAGTCTTCCTCACTCATGAATaGACACGCCTGGACCTGGAC +
Preference number: 4 (lower is better)
Translates to: LDSNLGTLAVQPATCMGVFLTHE*TRLDLD
Trigger: GTCCAGGTCCAGGCGTGTGCATTCATGAGTGAGGAA...GACTCCCATGCAAGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGAGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp GCCAAACAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTTGTTCCTCACTCATGAATaGACACGCCTGGACCTGGAC +
Preference number: 4 (lower is better)
Translates to: AKQSLGSLPGGKTHSNWLFLTHE*TRLDLD
Trigger: GTCCAGGTCCAGGCGTGTGCATTCATGAGTGAGGAA...CAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp AGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCTCCAGGATGCTCAGCGCCTaGACGGGTTCCTCACTCATG +
Preference number: 4 (lower is better)
Translates to: RLWYVILVSHLPLWACFSRMLSA*TGSSLM
Trigger: CATGAGTGAGGAACCCGTGCAGGCGCTGAGCATCCT...GGAGAAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp AGCATGGGTGGGAGGAAAATCAAACAGTTGCATGTTTGTGCCTCACTGCATTGTCAGTTCTGTCGGATCTaGGCAGGCCCAGCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: SMGGRKIKQLHVCASLHCQFCRI*AGPACG
Trigger: GCCGCAGGCTGGGCCTGCGCAGATCCGACAGAACTG...ACAATGCAGTGAGGCACAAACATGCAACTGTTTGATTTTCCTCCCACCCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp ACTTGCATGGGAGTCAGGCCAGGGGTGTCATTGACCTTGAGCTCTTGCCTTTCTGATGGGCAACTCACGTaGCCTTTCACAGTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: TCMGVRPGVSLTLSSCLSDGQLT*PFTVAF
Trigger: GAAGGCCACTGTGAAAGGGCACGTGAGTTGCCCATC...AGAAAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCTGACTCCCATGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp CCAAACAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTTGTCTGAAATCCACCTACTaGCAAGCAGGGCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PNNPWGPCQEGKLIPTGCLKSTY*QAGQRW
Trigger: CCACCTCTGCCCTGCTTGGCAGTAGGTGGATTTCAG...ACAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp TGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCTTCCAAAAACTCCCCATTTaGTGCCTGCCCTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: WQKGTDWRKDPCVAGESFQKLPI*CLPLPS
Trigger: GCTGGGCAAGGGCAGGCAGCAAATGGGGAGTTTTTG...GAAGCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp CTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCGCTGCTATAACAAAATaGCACCGACTGGGTGGATTA +
Preference number: 4 (lower is better)
Translates to: LGVLLRAKSTVAPSPFQTAAITK*HRLGGL
Trigger: TAATCCACCCAGTCGGTGGCATTTTGTTATAGCAGC...GGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp CTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATCCCACGTTTTACAATTaGTTTGGTCACAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLGWGYSSELSPPWHPVHPTFYN*FGHKGR
Trigger: CCTGCCTTTGTGACCAAAGCAATTGTAAAACGTGGG...ATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CCAGCACATGACTGGCCATCACCTAAACTGGGAAATCTCAAGGACTGGGACTGCCCTCCAGCATTTTTCTaGGCAGGTAGTGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PAHDWPSPKLGNLKDWDCPPAFF*AGSAAA
Trigger: GGCAGCAGCACTACCTGCCCAGAAAAATGCTGGAGG...GCAGTCCCAGTCCTTGAGATTTCCCAGTTTAGGTGATGGCCAGTCATGTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp ATCTGTGTTCTCACATCCTTGCTACACTGCCTCTGTCATCTTGAATCATGCGAGCCAGCACCACGGCGATaGTGCGCACGGACTTGCGCT +
Preference number: 4 (lower is better)
Translates to: ICVLTSLLHCLCHLESCEPAPRR*CARTCA
Trigger: AGCGCAAGTCCGTGCGCACCATCGCCGTGGTGCTGG...CTCGCATGATTCAAGATGACAGAGGCAGTGTAGCAAGGATGTGAGAACACAGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CTCACTCCAAGGTCAGAGCATGAGCTGCACCTCTCCACCCACACCACTTGGGCTCTCAGCTCCAGACTCTaGTATGTGATCTTGGTAAGC +
Preference number: 4 (lower is better)
Translates to: LTPRSEHELHLSTHTTWALSSRL*YVILVS
Trigger: GCTTACCAAGATCACATACCAGAGTCTGGAGCTGAG...AGCCCAAGTGGTGTGGGTGGAGAGGTGCAGCTCATGCTCTGACCTTGGAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp AGCTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTGAGCTAAGTCCACCGTaGCACCCAGTCCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: SSRLWYVILVSHLPLWACELSPP*HPVHSR
Trigger: TCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTC...ACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp ATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCAGATGTTCATCTCTTaGGCTGGGGGTACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: MVHIWGDCGVCTSPGPLQQMFIS*AGGTPQ
Trigger: CTGAGGAGTACCCCCAGCCCAAGAGATGAACATCTG...CTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp AGGTGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCACCACCCTGCCATTCTaGGATTTTCCCAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RWQKGTDWRKDPCVAGESTTLPF*DFPRRQ
Trigger: CTGCCTTCTGGGAAAATCCCAGAATGGCAGGGTGGT...GCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CACTGGCCAGACACACTGTCCTCTCCTTCAAAACATGTATCCCAATGTGGTTACCCCACGGGGGTTCCCTaGAGACGTATGGCCCACTGT +
Preference number: 4 (lower is better)
Translates to: HWPDTLSSPSKHVSQCGYPTGVP*RRMAHC
Trigger: ACAGTGGGCCATACGTCTCCAGGGAACCCCCGTGGG...GTAACCACATTGGGATACATGTTTTGAAGGAGAGGACAGTGTGTCTGGCCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CTGGGGCCTGGAGAGAGGATCCCTGATATGAGACTACTCCTGAGACAGCTAGTGGTGCCTTCACTGAGGTaGGGAAATTGGAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: LGPGERIPDMRLLLRQLVVPSLR*GNWNRG
Trigger: TCCCCTGTTCCAATTTCCCCACCTCAGTGAAGGCAC...CACTAGCTGTCTCAGGAGTAGTCTCATATCAGGGATCCTCTCTCCAGGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CACTGGCCAGACACACTGTCCTCTCCTTCAAAACATGTATCCCAATGTGGTTACGTGACTGGCCCTGCCTaGCCCATTGTTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HWPDTLSSPSKHVSQCGYVTGPA*PIVPGW
Trigger: CCAGCCAGGAACAATGGGCCAGGCAGGGCCAGTCAC...GTAACCACATTGGGATACATGTTTTGAAGGAGAGGACAGTGTGTCTGGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GAGCTCCAGACATCGCACTGTGTGGCTCTGTGTGGCGGCAGTGGGGTCACTTCAAAAACTCATTCCAACTaGTTGTGTCTCCCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: ELQTSHCVALCGGSGVTSKTHSN*LCLPGV
Trigger: GACTCCTGGGAGACACAACCAGTTGGAATGAGTTTT...TGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp ATCCCTGATATGAGACTACTCCTGAGACAGCTAGTGAGAAGGCAGGTGGCAGAAAGGCACAGCCCTCTCTaGGCCACCAGTCCCACTAAG +
Preference number: 4 (lower is better)
Translates to: IPDMRLLLRQLVRRQVAERHSPL*ATSPTK
Trigger: CTTAGTGGGACTGGTGGCCCAGAGAGGGCTGTGCCT...TTCTGCCACCTGCCTTCTCACTAGCTGTCTCAGGAGTAGTCTCATATCAGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATATGCCACCGACTGGGTaGATTAGAAACAAGAGACAT +
Preference number: 4 (lower is better)
Translates to: LLGWGYSSELSPPWHPVHMPPTG*IRNKRH
Trigger: ATGTCTCTTGTTTCTAATCCACCCAGTCGGTGGCAT...ATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp CTGGGGCCTGGAGAGAGGATCCCTGATATGAGACTACTCCTGAGACAGCTAGTGGCTTTCATTGCCATCTaGCTTGGATCTGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: LGPGERIPDMRLLLRQLVAFIAI*LGSGPG
Trigger: TCCAGGTCCAGATCCAAGTCAGATGGCAATGAAAGC...CACTAGCTGTCTCAGGAGTAGTCTCATATCAGGGATCCTCTCTCCAGGCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311131.6
CDS-3UTR TCA 90 bp ATCCCTGATATGAGACTACTCCTGAGACAGCTAGTGAGAAGGCAGGTGGCAGAACCTGACACAGCCACCTaGCCAGGGCTTTCATTGCCA +
Preference number: 4 (lower is better)
Translates to: IPDMRLLLRQLVRRQVAEPDTAT*PGLSLP
Trigger: TGGCAATGAAAGCCCTGGTCAGGTGGCTGTGTCAGG...TTCTGCCACCTGCCTTCTCACTAGCTGTCTCAGGAGTAGTCTCATATCAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311131.6
CDS-3UTR TCA 90 bp AGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACTCAGTGGGGTCATCCAGCATaGGTCACTGATGGTCCATAT +
Preference number: 4 (lower is better)
Translates to: RAKSTVAPSPFQTTVQTQWGHPA*VTDGPY
Trigger: ATATGGACCATCAGTGACTCATGCTGGATGACCCCA...CTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp CTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCTATACACACAAACGATaGCTAGGGGTTATGGGAACA +
Preference number: 4 (lower is better)
Translates to: LGVLLRAKSTVAPSPFQTYTHKR*LGVMGT
Trigger: TGTTCCCATAACCCCTAGTCATCGTTTGTGTGTATA...GGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp ATCTGTGTTCTCACATCCTTGCTACACTGCCTCTGTCATCTTGAATCATGCGAGGCCACGCTGACCTGCTaGATGACCTTGGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ICVLTSLLHCLCHLESCEATLTC*MTLGSA
Trigger: GGCTGAGCCCAAGGTCATTCAGCAGGTCAGCGTGGC...CTCGCATGATTCAAGATGACAGAGGCAGTGTAGCAAGGATGTGAGAACACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp CAGTTGACTCTGGACCACAGAGTGAATATCCTGAGCCCCTGTCAAATGACGGAGACAGGCCCATGGTCCTaGAATCCACCTACTGCCAAG +
Preference number: 4 (lower is better)
Translates to: QLTLDHRVNILSPCQMTETGPWS*NPPTAK
Trigger: CTTGGCAGTAGGTGGATTTCAGGACCATGGGCCTGT...CTCCGTCATTTGACAGGGGCTCAGGATATTCACTCTGTGGTCCAGAGTCAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp ATCCCTGATATGAGACTACTCCTGAGACAGCTAGTGAGAAGGCAGGTGGCAGAAGCTGAGACTGACACCTaGGCTGGAGCCAAGACAGAG +
Preference number: 4 (lower is better)
Translates to: IPDMRLLLRQLVRRQVAEAETDT*AGAKTE
Trigger: CTCTGTCTTGGCTCCAGCTCAGGTGTCAGTCTCAGC...TTCTGCCACCTGCCTTCTCACTAGCTGTCTCAGGAGTAGTCTCATATCAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp AGGTGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCGACCAGGGCTTTCATTaGCATCTGACTTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: RWQKGTDWRKDPCVAGESDQGFH*HLTWIW
Trigger: CCAGATCCAAGTCAGATGGCAATGAAAGCCCTGGTC...GCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311131.6
CDS-3UTR GCA 90 bp AGCTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTCAGGCTGAAGTGTTCTaGTCCTACAGCCGAATGTCC +
Preference number: 4 (lower is better)
Translates to: SSRLWYVILVSHLPLWACQAEVF*SYSRMS
Trigger: GGACATTCGGCTGTAGGAGCAGAACACTTCAGCCTG...ACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp TGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCATGTCATCTTGAATCATaGGAGGGGCCACTTATAGAC +
Preference number: 4 (lower is better)
Translates to: WGYSSELSPPWHPVHSRPCHLES*EGPLID
Trigger: GTCTATAAGTGGCCCCTCGCATGATTCAAGATGACA...TGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp GGGAGGTGTGAAGGGGGCAGGGAATATTGGAGGGTAATAGGAGATATTTTGAGGAAACTCCCCATTTGCTaGCTGCCCTTGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GRCEGGREYWRVIGDILRKLPIC*LPLPSS
Trigger: GGAGCTGGGCAAGGGCAGGCAGCAAATGGGGAGTTT...CCTCAAAATATCTCCTATTACCCTCCAATATTCCCTGCCCCCTTCACACCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp TATGATATTAGTCCCCAGATGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCTTAAGGTCAGGCCCCTaGACTGGGCTCACTCCAAGG +
Preference number: 4 (lower is better)
Translates to: YDISPQMFISWAGGTPQSLRSGP*TGLTPR
Trigger: CCTTGGAGTGAGCCCAGTGCAGGGGCCTGACCTTAA...GCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACATCTGGGGACTAATATCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp ATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAATCCCCAGCAGGGTGTaGAGGAAAATCACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: IQHESLMVHIWGDCGVCTIPSRV*RKITQG
Trigger: TCCCTGAGTGATTTTCCTGCACACCCTGCTGGGGAT...TGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CAGTTGACTCTGGACCACAGAGTGAATATCCTGAGCCCCTGTCAAATGACGGAGCCTCCAGCATTTTTCTaGGCAGGTAGTGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: QLTLDHRVNILSPCQMTEPPAFF*AGSAAA
Trigger: GGCAGCAGCACTACCTGCCCAGAAAAATGCTGGAGG...CTCCGTCATTTGACAGGGGCTCAGGATATTCACTCTGTGGTCCAGAGTCAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp GTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGCCTCCAGCATTTTTCTaGGCAGGTAGTGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: VCTSPGPLQLPNINLHRLPPAFF*AGSAAA
Trigger: GGCAGCAGCACTACCTGCCCAGAAAAATGCTGGAGG...CAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp TCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACATTGCCATCTGACTTaGATCTGGACCTGGAACCTC +
Preference number: 4 (lower is better)
Translates to: SSELSPPWHPVHSRPLCKHCHLT*IWTWNL
Trigger: GAGGTTCCAGGTCCAGATCCAAGTCAGATGGCAATG...TTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311131.6
CDS-3UTR CCA 90 bp CACAGAGTGAATATCCTGAGCCCCTGTCAAATGACGGAGCATGGGGTCATCCAGCGTCTGCACAAGTCCTaGTCCTCTACAGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: HRVNILSPCQMTEHGVIQRLHKS*SSTASQ
Trigger: TTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACG...CTGGATGACCCCATGCTCCGTCATTTGACAGGGGCTCAGGATATTCACTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp TATGATATTAGTCCCCAGATGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCAGCCAGCTACTTGCATaGGAGTCAGGCCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: YDISPQMFISWAGGTPQSSQLLA*ESGQGC
Trigger: ACACCCCTGGCCTGACTCCCATGCAAGTAGCTGGCT...GCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACATCTGGGGACTAATATCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp TCCATTCCAGACCACTGTGCAAACTCAGCCCTCATTACTTACCAGGGTTTTCTGCTGGCTCCTAGCCCATaGGAGCCTCCAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: SIPDHCANSALITYQGFLLAPSP*EPPDGS
Trigger: AGACCCATCTGGAGGCTCCCATGGGCTAGGAGCCAG...CAGAAAACCCTGGTAAGTAATGAGGGCTGAGTTTGCACAGTGGTCTGGAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp GCTGGACTCCAACCTAGGTACCTTGGCAGTACAGCCAGCTACTTGCATGGGAGTCAGAAGGGAACGGATTaGAGAAAGGACCCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: AGLQPRYLGSTASYLHGSQKGTD*RKDPCV
Trigger: CACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTG...ACTCCCATGCAAGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGAGTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp CCAAACAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTTGTCCAGAAGGCAGACGATaGACAGGAGGAGGAGTGAAT +
Preference number: 4 (lower is better)
Translates to: PNNPWGPCQEGKLIPTGCPEGRR*TGGGVN
Trigger: ATTCACTCCTCCTCCTGTCCATCGTCTGCCTTCTGG...ACAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp TGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCGGAAAGGCTCAAGGGTaGTTTGTAACAGGCAATCAT +
Preference number: 4 (lower is better)
Translates to: CSSLGLGVLLRAKSTVAPGKAQG*FVTGNH
Trigger: ATGATTGCCTGTTACAAACCACCCTTGAGCCTTTCC...GGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GGGAAGAGGACAGGTGAGCATTCAATTAAGCAGGCGATGGAAATCTTAAACCTGGCCAGGCAGTCCAACTaGGTTCCAGAGGTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GKRTGEHSIKQAMEILNLARQSN*VPEVPL
Trigger: CAGGGGCACCTCTGGAACCCAGTTGGACTGCCTGGC...CAGGTTTAAGATTTCCATCGCCTGCTTAATTGAATGCTCACCTGTCCTCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp TGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCGGGGGCAGGGAATATTaGAGGGTAATAGGAGATATT +
Preference number: 4 (lower is better)
Translates to: CSSLGLGVLLRAKSTVAPGGREY*RVIGDI
Trigger: AATATCTCCTATTACCCTCCAATATTCCCTGCCCCC...GGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GATAACCTGGAACAAGTCCTCACTTCTCACGCCCTTCTCCTGTTTCCTCATCTGCTGGCCTCAGGTCTATaGCTCCATCCCAGTCACCCT +
Preference number: 4 (lower is better)
Translates to: DNLEQVLTSHALLLFPHLLASGL*LHPSHP
Trigger: AGGGTGACTGGGATGGAGCCATAGACCTGAGGCCAG...CAGATGAGGAAACAGGAGAAGGGCGTGAGAAGTGAGGACTTGTTCCAGGTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CAGGCCAGGGGTGTCATTGACCTTGAGCTCTTGCCTTTCTTGAAACTTAATTCCTCCCTGTCCTGTCCCTaGCCTCAGGTCTATGGCTCC +
Preference number: 4 (lower is better)
Translates to: QARGVIDLELLPFLKLNSSLSCP*PQVYGS
Trigger: GGAGCCATAGACCTGAGGCCAGGGACAGGACAGGGA...GGAATTAAGTTTCAAGAAAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTCCCACTGTTGCTCACTaGCCAGACACACTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: RLHKSWSSTASQYKPAQAPTVAH*PDTLSS
Trigger: AGAGGACAGTGTGTCTGGCCAGTGAGCAACAGTGGG...AGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CCAGCACATGACTGGCCATCACCTAAACTGGGAAATCTCAAGGACTGGGACTGCCCACAGCTGGGCACCTaGACAAGGTTCTGTAAACAG +
Preference number: 4 (lower is better)
Translates to: PAHDWPSPKLGNLKDWDCPQLGT*TRFCKQ
Trigger: CTGTTTACAGAACCTTGTCCAGGTGCCCAGCTGTGG...GCAGTCCCAGTCCTTGAGATTTCCCAGTTTAGGTGATGGCCAGTCATGTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp ACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCTCCATTGCAGAGCACCATGGTaGACACCCCAGTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: TLVCDLGKPPSSLGLFLHCRAPW*TPQSGR
Trigger: TCTCCCTGACTGGGGTGTCCACCATGGTGCTCTGCA...ATGGAGAAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGAAATGACATCAGGGTaGGGAGGTAAGGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RLHKSWSSTASQYKPAQAEMTSG*GGKEQG
Trigger: GCCCTGCTCCTTACCTCCCCACCCTGATGTCATTTC...AGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GATAACCTGGAACAAGTCCTCACTTCTCACGCCCTTCTCCTGTTTCCTCATCTGATCGGGGTGCCAGCATaGTTGGGATCTGGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: DNLEQVLTSHALLLFPHLIGVPA*LGSGEG
Trigger: TCCCTCACCAGATCCCAACCATGCTGGCACCCCGAT...CAGATGAGGAAACAGGAGAAGGGCGTGAGAAGTGAGGACTTGTTCCAGGTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CAA 72 bp GGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTaGTGTCTCCCAGGAGTCTCACGTGATGTTTCACAA +
Preference number: 4 (lower is better)
Translates to: GSLPGGKTHSNW*CLPGVSRDVSQ
Trigger: TTGTGAAACATCACGTGAGACTCCTGGGAGACACAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp TCCATTCCAGACCACTGTGCAAACTCAGCCCTCATTACTTACCAGGGTTTTCTGCGGGTTCCTCACTCATaGATGCACACGCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: SIPDHCANSALITYQGFLRVPHS*MHTPGP
Trigger: AGGTCCAGGCGTGTGCATTCATGAGTGAGGAACCCG...CAGAAAACCCTGGTAAGTAATGAGGGCTGAGTTTGCACAGTGGTCTGGAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp CAGGCCAGGGGTGTCATTGACCTTGAGCTCTTGCCTTTCTTGAAACTTAATTCCCGGGTTCCTCACTCATaGATGCACACGCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: QARGVIDLELLPFLKLNSRVPHS*MHTPGP
Trigger: AGGTCCAGGCGTGTGCATTCATGAGTGAGGAACCCG...GGAATTAAGTTTCAAGAAAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp ATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGTGGTTACGTACTAAGTaGTGTCAACTCTGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: MVHIWGDCGVCTSPGPLQWLRTK*CQLCEG
Trigger: GCCCTCACAGAGTTGACATCACTTAGTACGTAACCA...CTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp CGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGAAGTGGCAAGTTTCTaGAGCTTGCTACTAGGGGCC +
Preference number: 4 (lower is better)
Translates to: RLHKSWSSTASQYKPAQAEVASF*SLLLGA
Trigger: GGCCCCTAGTAGCAAGCTTCAGAAACTTGCCACTTC...AGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp AGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCTCCGCGAGCTCTCTAGCCTaGAGTGGCAAGTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: RLWYVILVSHLPLWACFSASSLA*SGKFLK
Trigger: CTTCAGAAACTTGCCACTTCAGGCTAGAGAGCTCGC...GGAGAAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp CATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCTACAAAGGTGTGGACTaGTGTTTGGAGAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: HIWGDCGVCTSPGPLQLPYKGVD*CLESSV
Trigger: CACAGAACTCTCCAAACATCAGTCCACACCTTTGTA...GGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp CTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTTTCCTCACTCATGAATaGACACGCCTGGACCTGGAC +
Preference number: 4 (lower is better)
Translates to: LQTLVCDLGKPPSSLGLFFLTHE*TRLDLD
Trigger: GTCCAGGTCCAGGCGTGTGCATTCATGAGTGAGGAA...AAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp CTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCAGGCTGAAGTGTTCTaGTCCTACAGCCGAATGTCC +
Preference number: 4 (lower is better)
Translates to: LQTLVCDLGKPPSSLGLFQAEVF*SYSRMS
Trigger: GGACATTCGGCTGTAGGAGCAGAACACTTCAGCCTG...AAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp CCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGAAGTGTTCTGCTGGAGACTGTGGCGTCTaGACAAGTCCTGGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: PGPLQLPNINLHRLKCSAGDCGV*TSPGPL
Trigger: TAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCC...AGCAGAACACTTCAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp AGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACTCAGCATTCCAGACCACTGTaGAAACTCAGCCCTCATTAC +
Preference number: 4 (lower is better)
Translates to: RAKSTVAPSPFQTTVQTQHSRPL*KLSPHY
Trigger: GTAATGAGGGCTGAGTTTGCACAGTGGTCTGGAATG...CTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp TCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAATTCATTGAGAACAGCTaGTGCAGGCACATCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SSELSPPWHPVHSRPLCKFIENS*CRHISR
Trigger: TCTGCTGATGTGCCTGCAGCAGCTGTTCTCAATGAA...TTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp CTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCAAATCCCTGGGGTCCCTaGCAGGAGGGAAAACTCATT +
Preference number: 4 (lower is better)
Translates to: LWRLHKSWSSTASQYKPANPWGP*QEGKLI
Trigger: AATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATT...TGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp GCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACTCAGCCCTTCCAGGTTGCAGACTaGCAACTTCTCATTATATCC +
Preference number: 4 (lower is better)
Translates to: AKSTVAPSPFQTTVQTQPFQVAD*QLLIIS
Trigger: GGATATAATGAGAAGTTGGCAGTCTGCAACCTGGAA...GGGCTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp AGTATAAGTTACAGCCTCACACTGGCTCCTAGCCCATGGGAGCCTCCAGATGGGTCAGACACAGCCAGGTaGAACATATATGTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: SISYSLTLAPSPWEPPDGSDTAR*NIYVVD
Trigger: GTCCACCACATATATGTTCCACCTGGCTGTGTCTGA...CCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACTTATACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp ACTCAGCCCTCATTACTTACCAGGGTTTTCTGGCCAACCTGTGACTTGGCCCCCTCAGACACAGCCAGGTaGAACATATATGTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: TQPSLLTRVFWPTCDLAPSDTAR*NIYVVD
Trigger: GTCCACCACATATATGTTCCACCTGGCTGTGTCTGA...GGGGGCCAAGTCACAGGTTGGCCAGAAAACCCTGGTAAGTAATGAGGGCTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp GGGGACACAAACATTCAGTTCCTAACAGCCACATTTGGTAAAAATGGGACTCAGGCTGGGGCCAGTGGGTaGCTTGGCATCTCGGGCAAA +
Preference number: 4 (lower is better)
Translates to: GDTNIQFLTATFGKNGTQAGASG*LGISGK
Trigger: TTTGCCCGAGATGCCAAGCCACCCACTGGCCCCAGC...CTGAGTCCCATTTTTACCAAATGTGGCTGTTAGGAACTGAATGTTTGTGTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp ACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCTCCATGAGCTAAGTCCACCGTaGCACCCAGTCCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: TLVCDLGKPPSSLGLFLHELSPP*HPVHSR
Trigger: TCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTC...ATGGAGAAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp CTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCAGTTCATCTCTTGGGCTaGGGGTACTCCTCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: LWRLHKSWSSTASQYKPAVHLLG*GYSSEL
Trigger: TAGCTCTGAGGAGTACCCCCAGCCCAAGAGATGAAC...TGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp GCTGGACTCCAACCTAGGTACCTTGGCAGTACAGCCAGCTACTTGCATGGGAGTCTCGGCATTATCCAGTaGTGTGCTAGAGTGACTTGT +
Preference number: 4 (lower is better)
Translates to: AGLQPRYLGSTASYLHGSLGIIQ*CARVTC
Trigger: ACAAGTCACTCTAGCACACCACTGGATAATGCCGAG...ACTCCCATGCAAGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGAGTCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp ATCCCTGATATGAGACTACTCCTGAGACAGCTAGTGAGAAGGCAGGTGGCAGAACACGTCAGCCCAGAGTaGTCCTGGCTAGACTCAGAA +
Preference number: 4 (lower is better)
Translates to: IPDMRLLLRQLVRRQVAEHVSPE*SWLDSE
Trigger: TTCTGAGTCTAGCCAGGACCACTCTGGGCTGACGTG...TTCTGCCACCTGCCTTCTCACTAGCTGTCTCAGGAGTAGTCTCATATCAGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGAAGTGTTCTGCTAGTGGGAATGTACCCTaGGGTTCCTCCATCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PGPLQLPNINLHRLKCSASGNVP*GSSIPP
Trigger: AGGAGGGATGGAGGAACCCCAGGGTACATTCCCACT...AGCAGAACACTTCAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GGGAAGAGGACAGGTGAGCATTCAATTAAGCAGGCGATGGAAATCTTAAACCTGCTGCCCTCCCACAGCTaGGCACCTGGACAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GKRTGEHSIKQAMEILNLLPSHS*APGQGS
Trigger: AGAACCTTGTCCAGGTGCCCAGCTGTGGGAGGGCAG...CAGGTTTAAGATTTCCATCGCCTGCTTAATTGAATGCTCACCTGTCCTCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GCCAAACAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTTGGAACCCTGGGCACCATaGATTCAAAGACATCTTTGC +
Preference number: 4 (lower is better)
Translates to: AKQSLGSLPGGKTHSNWLEPWAP*IQRHLC
Trigger: GCAAAGATGTCTTTGAATCCATGGTGCCCAGGGTTC...CAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp ACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCTCCATACGCATTCCAGGTCTTaGGGCGGCACAAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: TLVCDLGKPPSSLGLFLHTHSRS*GGTRRC
Trigger: ACATCTTCTTGTGCCGCCTCAAGACCTGGAATGCGT...ATGGAGAAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp ATCTGTGTTCTCACATCCTTGCTACACTGCCTCTGTCATCTTGAATCATGCGAGCGTAACAGACAAGGATaGCGGCAAAGGGCACCGCGA +
Preference number: 4 (lower is better)
Translates to: ICVLTSLLHCLCHLESCERNRQG*RQRAPR
Trigger: TCGCGGTGCCCTTTGCCGTCATCCTTGTCTGTTACG...CTCGCATGATTCAAGATGACAGAGGCAGTGTAGCAAGGATGTGAGAACACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp CATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAGCTCTTGCCTTTCTTaGAACTTAATTCCCCCAACT +
Preference number: 4 (lower is better)
Translates to: HIWGDCGVCTSPGPLQLPSSCLS*NLIPPT
Trigger: AGTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAGCT...GGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp AGGTGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCTTTCTCCATTTGACTTaGTTAGGCTGGACTCCAACC +
Preference number: 4 (lower is better)
Translates to: RWQKGTDWRKDPCVAGESFLHLT*LGWTPT
Trigger: GGTTGGAGTCCAGCCTAATCAAGTCAAATGGAGAAA...GCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR TCA 90 bp CACTGGCCAGACACACTGTCCTCTCCTTCAAAACATGTATCCCAATGTGGTTACCCCTTGTGTGGCTGGTaGAAGCTTCCCTGCCATATC +
Preference number: 4 (lower is better)
Translates to: HWPDTLSSPSKHVSQCGYPLCGW*KLPCHI
Trigger: GATATGGCAGGGAAGCTTTCACCAGCCACACAAGGG...GTAACCACATTGGGATACATGTTTTGAAGGAGAGGACAGTGTGTCTGGCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp TCCATTCCAGACCACTGTGCAAACTCAGCCCTCATTACTTACCAGGGTTTTCTGGACTGGGACTGCACCTaGCTTTTCTCTGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SIPDHCANSALITYQGFLDWDCT*LFSVLS
Trigger: GCTGAGCACAGAGAAAAGTCAGGTGCAGTCCCAGTC...CAGAAAACCCTGGTAAGTAATGAGGGCTGAGTTTGCACAGTGGTCTGGAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR TCA 90 bp CACAGAGTGAATATCCTGAGCCCCTGTCAAATGACGGAGCATGGGGTCATCCAGCAGACATTTACTCCCTaGCACTCAACTCTCTACCCT +
Preference number: 4 (lower is better)
Translates to: HRVNILSPCQMTEHGVIQQTFTP*HSTLYP
Trigger: AGGGTAGAGAGTTGAGTGTCAGGGAGTAAATGTCTG...CTGGATGACCCCATGCTCCGTCATTTGACAGGGGCTCAGGATATTCACTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp TCCATTCCAGACCACTGTGCAAACTCAGCCCTCATTACTTACCAGGGTTTTCTGCTGCCTCTGTCATCTTaGATCATGCGAGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: SIPDHCANSALITYQGFLLPLSS*IMRGAT
Trigger: AGTGGCCCCTCGCATGATTCAAGATGACAGAGGCAG...CAGAAAACCCTGGTAAGTAATGAGGGCTGAGTTTGCACAGTGGTCTGGAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp CCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGAAGTGTTCTGCTCAGGCTGAAGTGTTCTaGTCCTACAGCCGAATGTCC +
Preference number: 4 (lower is better)
Translates to: PGPLQLPNINLHRLKCSAQAEVF*SYSRMS
Trigger: GGACATTCGGCTGTAGGAGCAGAACACTTCAGCCTG...AGCAGAACACTTCAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp CTCTTGCCTTTCTTGAAACTTAATTCCCCCAACTTATACACACAAACGATGACTCCAGGGGCCCAGGTCTaGTGCCATCGCCCTGACCAG +
Preference number: 4 (lower is better)
Translates to: LLPFLKLNSPNLYTQTMTPGAQV*CHRPDQ
Trigger: CTGGTCAGGGCGATGGCAGCAGACCTGGGCCCCTGG...AGTCATCGTTTGTGTGTATAAGTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp TGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCTTCTGTCTTTGCCTGGGATaGATCCTGTGTGTGGATGTT +
Preference number: 4 (lower is better)
Translates to: WQKGTDWRKDPCVAGESFCLCLG*ILCVDV
Trigger: AACATCCACACACAGGATGCATCCCAGGCAAAGACA...GAAGCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp ACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCTCCATGCTTTGGGGATGTCCTaGCTTTCACAAGGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: TLVCDLGKPPSSLGLFLHALGMS*LSQGRV
Trigger: CACTCTGCCTTGTGAAAGGCAGGACATCCCCAAAGC...ATGGAGAAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp AGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACTCAGGTGTGGATAACATGTTaGTTAGGGCCTCTTCTAACC +
Preference number: 4 (lower is better)
Translates to: RAKSTVAPSPFQTTVQTQVWITC*LGPLLT
Trigger: GGTTAGAAGAGGCCCTAAGCAACATGTTATCCACAC...CTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CACAGAGTGAATATCCTGAGCCCCTGTCAAATGACGGAGCATGGGGTCATCCAGGGTGGAACATATATGTaGTGGACGCATTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: HRVNILSPCQMTEHGVIQGGTYM*WTHSRS
Trigger: AGACCTGGAATGCGTCCACCACATATATGTTCCACC...CTGGATGACCCCATGCTCCGTCATTTGACAGGGGCTCAGGATATTCACTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp GGGAAGAGGACAGGTGAGCATTCAATTAAGCAGGCGATGGAAATCTTAAACCTGAGCCAGCTACTTGCATaGGAGTCAGGCCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: GKRTGEHSIKQAMEILNLSQLLA*ESGQGC
Trigger: ACACCCCTGGCCTGACTCCCATGCAAGTAGCTGGCT...CAGGTTTAAGATTTCCATCGCCTGCTTAATTGAATGCTCACCTGTCCTCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGAAGTGTTCTGCTGAAAGGACCCTTGTGTaGCTGGTGAAAGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PGPLQLPNINLHRLKCSAERTLV*LVKASL
Trigger: CAGGGAAGCTTTCACCAGCCACACAAGGGTCCTTTC...AGCAGAACACTTCAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp CTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCAGAAGGGAACGGATTaGAGAAAGGACCCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: LQTLVCDLGKPPSSLGLFQKGTD*RKDPCV
Trigger: CACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTG...AAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp CTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTGGCCATCACCTAAACTaGGAAATCTCAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: LQTLVCDLGKPPSSLGLFGHHLN*EISRTG
Trigger: CCCAGTCCTTGAGATTTCCCAGTTTAGGTGATGGCC...AAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp CATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTTTACCAGCACATGACTaGCCATCACCTAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: HESLMVHIWGDCGVCTSPLPAHD*PSPKLG
Trigger: TCCCAGTTTAGGTGATGGCCAGTCATGTGCTGGTAA...AGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp GGGAAGAGGACAGGTGAGCATTCAATTAAGCAGGCGATGGAAATCTTAAACCTGTGTCCAGCCTGCTTATaGCTCATGCACACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GKRTGEHSIKQAMEILNLCPACL*LMHTLP
Trigger: GGGCAGGGTGTGCATGAGCCATAAGCAGGCTGGACA...CAGGTTTAAGATTTCCATCGCCTGCTTAATTGAATGCTCACCTGTCCTCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp TATGATATTAGTCCCCAGATGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCAGCCCAGAGTGGTCCTaGCTAGACTCAGAACCTATC +
Preference number: 4 (lower is better)
Translates to: YDISPQMFISWAGGTPQSSPEWS*LDSEPI
Trigger: GATAGGTTCTGAGTCTAGCCAGGACCACTCTGGGCT...GCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACATCTGGGGACTAATATCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp AGGTGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCAAATACAGCAAGCTTTaGGGATGTCCTGCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: RWQKGTDWRKDPCVAGESKYSKL*GCPAFH
Trigger: GTGAAAGGCAGGACATCCCCAAAGCTTGCTGTATTT...GCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp ATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACACTCTCTAGCCTGAAGTaGCAAGTTTCTGAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: IQHESLMVHIWGDCGVCTLSSLK*QVSEAC
Trigger: GCAAGCTTCAGAAACTTGCCACTTCAGGCTAGAGAG...TGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp AGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCTCCGTCACTTCACTTCTCTaGTCACTTGATGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RLWYVILVSHLPLWACFSVTSLL*SLDAGE
Trigger: CTCCCCAGCATCAAGTGACCAGAGAAGTGAAGTGAC...GGAGAAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGGTCACTGCTGGACAATaGTCCAGGGCAGTCATTGTA +
Preference number: 4 (lower is better)
Translates to: VCTSPGPLQLPNINLHRLVTAGQ*SRAVIV
Trigger: TACAATGACTGCCCTGGACCATTGTCCAGCAGTGAC...CAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GGGGACACAAACATTCAGTTCCTAACAGCCACATTTGGTAAAAATGGGACTCAGGGGTGCCAGCATGGTTaGGATCTGGTGAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: GDTNIQFLTATFGKNGTQGCQHG*DLVRDL
Trigger: GAGGTCCCTCACCAGATCCCAACCATGCTGGCACCC...CTGAGTCCCATTTTTACCAAATGTGGCTGTTAGGAACTGAATGTTTGTGTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp CAGGCCAGGGGTGTCATTGACCTTGAGCTCTTGCCTTTCTTGAAACTTAATTCCACGCATTCCAGGTCTTaGGGCGGCACAAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: QARGVIDLELLPFLKLNSTHSRS*GGTRRC
Trigger: ACATCTTCTTGTGCCGCCTCAAGACCTGGAATGCGT...GGAATTAAGTTTCAAGAAAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp GGGAGGTGTGAAGGGGGCAGGGAATATTGGAGGGTAATAGGAGATATTTTGAGGTGGGGTCATCCAGCATaGGTCACTGATGGTCCATAT +
Preference number: 4 (lower is better)
Translates to: GRCEGGREYWRVIGDILRWGHPA*VTDGPY
Trigger: ATATGGACCATCAGTGACTCATGCTGGATGACCCCA...CCTCAAAATATCTCCTATTACCCTCCAATATTCCCTGCCCCCTTCACACCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp ATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACATTTCTCCATTTGACTTaGTTAGGCTGGACTCCAACC +
Preference number: 4 (lower is better)
Translates to: IQHESLMVHIWGDCGVCTFLHLT*LGWTPT
Trigger: GGTTGGAGTCCAGCCTAATCAAGTCAAATGGAGAAA...TGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp CCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGAAGTGTTCTGCTTGGAGAGAGGATCCCTaGTATGAGACTACTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PGPLQLPNINLHRLKCSAWREDP*YETTPE
Trigger: CTCAGGAGTAGTCTCATATCAGGGATCCTCTCTCCA...AGCAGAACACTTCAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR TCA 90 bp ATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAGGACAGGAGGAGGAGTaGATCTCTTTCATATTTACC +
Preference number: 4 (lower is better)
Translates to: IQHESLMVHIWGDCGVCTGQEEE*ISFIFT
Trigger: GGTAAATATGAAAGAGATTCACTCCTCCTCCTGTCC...TGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp CACTGGCCAGACACACTGTCCTCTCCTTCAAAACATGTATCCCAATGTGGTTACTCACAGTGGCCTTCATaGGTCAACAGCCCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: HWPDTLSSPSKHVSQCGYSQWPS*VNSPGS
Trigger: ACTTCCTGGGCTGTTGACTCATGAAGGCCACTGTGA...GTAACCACATTGGGATACATGTTTTGAAGGAGAGGACAGTGTGTCTGGCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp ATCTGTGTTCTCACATCCTTGCTACACTGCCTCTGTCATCTTGAATCATGCGAGAAGAGCTGGGCAGTGTaGGTGACAGCAGGATCGTCA +
Preference number: 4 (lower is better)
Translates to: ICVLTSLLHCLCHLESCEKSWAV*VTAGSS
Trigger: TGACGATCCTGCTGTCACTCACACTGCCCAGCTCTT...CTCGCATGATTCAAGATGACAGAGGCAGTGTAGCAAGGATGTGAGAACACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp TCCATTCCAGACCACTGTGCAAACTCAGCCCTCATTACTTACCAGGGTTTTCTGTCTAACCTCAGGGGGTaGAAGTGGGAATGTACCCTG +
Preference number: 4 (lower is better)
Translates to: SIPDHCANSALITYQGFLSNLRG*KWECTL
Trigger: CAGGGTACATTCCCACTTTCACCCCCTGAGGTTAGA...CAGAAAACCCTGGTAAGTAATGAGGGCTGAGTTTGCACAGTGGTCTGGAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp ACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCTCCATGTAGCTTTGGTGACTTaGCCTGGAGCAACCATGTGT +
Preference number: 4 (lower is better)
Translates to: TLVCDLGKPPSSLGLFLHVALVT*PGATMC
Trigger: ACACATGGTTGCTCCAGGTCAAGTCACCAAAGCTAC...ATGGAGAAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp GCTGGACTCCAACCTAGGTACCTTGGCAGTACAGCCAGCTACTTGCATGGGAGTACATCTTCTATCCTCTaGATGTCAGTTCTGTCGGAT +
Preference number: 4 (lower is better)
Translates to: AGLQPRYLGSTASYLHGSTSSIL*MSVLSD
Trigger: ATCCGACAGAACTGACATGCAGAGGATAGAAGATGT...ACTCCCATGCAAGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGAGTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp GCCAAACAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTTGACATCTTCTATCCTCTaGATGTCAGTTCTGTCGGAT +
Preference number: 4 (lower is better)
Translates to: AKQSLGSLPGGKTHSNWLTSSIL*MSVLSD
Trigger: ATCCGACAGAACTGACATGCAGAGGATAGAAGATGT...CAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp CTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCATTCCAGACCACTGTaGAAACTCAGCCCTCATTAC +
Preference number: 4 (lower is better)
Translates to: LQTLVCDLGKPPSSLGLFHSRPL*KLSPHY
Trigger: GTAATGAGGGCTGAGTTTGCACAGTGGTCTGGAATG...AAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp TATGATATTAGTCCCCAGATGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCCATATTTACCCCCAGTaGAAAGGAAGCCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: YDISPQMFISWAGGTPQSHIYPQ*KGSLRV
Trigger: GACCCTGAGGCTTCCTTTGCACTGGGGGTAAATATG...GCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACATCTGGGGACTAATATCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp GGGGACACAAACATTCAGTTCCTAACAGCCACATTTGGTAAAAATGGGACTCAGGTGATGGCTGAACTGTaGCAGAGCCCTGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GDTNIQFLTATFGKNGTQVMAEL*QSPAPA
Trigger: TGCAGGAGCAGGGCTCTGGCACAGTTCAGCCATCAC...CTGAGTCCCATTTTTACCAAATGTGGCTGTTAGGAACTGAATGTTTGTGTCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTGGTGGAACATATATGTaGTGGACGCATTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LQTLVCDLGKPPSSLGLFGGTYM*WTHSRS
Trigger: AGACCTGGAATGCGTCCACCACATATATGTTCCACC...AAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp TCCATTCCAGACCACTGTGCAAACTCAGCCCTCATTACTTACCAGGGTTTTCTGCGTCTGCACAAGTCCTaGTCCTCTACAGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: SIPDHCANSALITYQGFLRLHKS*SSTASQ
Trigger: TTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACG...CAGAAAACCCTGGTAAGTAATGAGGGCTGAGTTTGCACAGTGGTCTGGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp CGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTCTCAGCTCCAGACTCTaGTATGTGATCTTGGTAAGC +
Preference number: 4 (lower is better)
Translates to: RLHKSWSSTASQYKPAQALSSRL*YVILVS
Trigger: GCTTACCAAGATCACATACCAGAGTCTGGAGCTGAG...AGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp TCCATTCCAGACCACTGTGCAAACTCAGCCCTCATTACTTACCAGGGTTTTCTGCAGATGTTCATCTCTTaGGCTGGGGGTACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SIPDHCANSALITYQGFLQMFIS*AGGTPQ
Trigger: CTGAGGAGTACCCCCAGCCCAAGAGATGAACATCTG...CAGAAAACCCTGGTAAGTAATGAGGGCTGAGTTTGCACAGTGGTCTGGAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp CTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTTTACCAGCACATGACTaGCCATCACCTAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: LQTLVCDLGKPPSSLGLFLPAHD*PSPKLG
Trigger: TCCCAGTTTAGGTGATGGCCAGTCATGTGCTGGTAA...AAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp CTGGGGCCTGGAGAGAGGATCCCTGATATGAGACTACTCCTGAGACAGCTAGTGTTTGCACCATGGAAATaGGCAGTTCTACAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: LGPGERIPDMRLLLRQLVFAPWK*AVLQRR
Trigger: CCTTCTTTGTAGAACTGCCCATTTCCATGGTGCAAA...CACTAGCTGTCTCAGGAGTAGTCTCATATCAGGGATCCTCTCTCCAGGCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp CACAGAGTGAATATCCTGAGCCCCTGTCAAATGACGGAGCATGGGGTCATCCAGTGGAGCAACCATGTGTaGATAACATGTTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: HRVNILSPCQMTEHGVIQWSNHV*ITCCLG
Trigger: CCCTAAGCAACATGTTATCCACACATGGTTGCTCCA...CTGGATGACCCCATGCTCCGTCATTTGACAGGGGCTCAGGATATTCACTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp ATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACATTTGGTGACTTGACCTaGAGCAACCATGTGTGGATA +
Preference number: 4 (lower is better)
Translates to: IQHESLMVHIWGDCGVCTFGDLT*SNHVWI
Trigger: TATCCACACATGGTTGCTCCAGGTCAAGTCACCAAA...TGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CTTGACCTGGAGCAACCATGTGTGGATAACATGTTGCTTAGGGCCTCTTCTAACCCTCAACGCCCTGCATaGAAGGTAGCAGCACACTTT +
Preference number: 4 (lower is better)
Translates to: LDLEQPCVDNMLLRASSNPQRPA*KVAAHF
Trigger: AAAGTGTGCTGCTACCTTCCATGCAGGGCGTTGAGG...GTTAGAAGAGGCCCTAAGCAACATGTTATCCACACATGGTTGCTCCAGGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GGGAAGAGGACAGGTGAGCATTCAATTAAGCAGGCGATGGAAATCTTAAACCTGTCTGTGTGGCGGCAGTaGGGTCACTTCACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GKRTGEHSIKQAMEILNLSVWRQ*GHFTSL
Trigger: CAGAGAAGTGAAGTGACCCCACTGCCGCCACACAGA...CAGGTTTAAGATTTCCATCGCCTGCTTAATTGAATGCTCACCTGTCCTCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACACCATTCTGAAGACTaGAAGTCTAAGATCGGGGTG +
Preference number: 4 (lower is better)
Translates to: LWRLHKSWSSTASQYKPAHHSED*KSKIGV
Trigger: CACCCCGATCTTAGACTTCCAGTCTTCAGAATGGTG...TGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTCAGTCACAGTCAGCGTaGGCTGCTATAACAAAATGC +
Preference number: 4 (lower is better)
Translates to: RLHKSWSSTASQYKPAQAQSQSA*AAITKC
Trigger: GCATTTTGTTATAGCAGCCCACGCTGACTGTGACTG...AGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp ATCTGTGTTCTCACATCCTTGCTACACTGCCTCTGTCATCTTGAATCATGCGAGCCAGGAAAGACACATTaGTCCCTTTCCTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: ICVLTSLLHCLCHLESCEPGKTH*SLSSPP
Trigger: GGGTGGGGAGGAAAGGGACCAATGTGTCTTTCCTGG...CTCGCATGATTCAAGATGACAGAGGCAGTGTAGCAAGGATGTGAGAACACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp ACTCAGCCCTCATTACTTACCAGGGTTTTCTGGCCAACCTGTGACTTGGCCCCCAAATCTGAGGACACATaGGGTAAAATAGCCCGCTTT +
Preference number: 4 (lower is better)
Translates to: TQPSLLTRVFWPTCDLAPKSEDT*GKIARF
Trigger: AAAGCGGGCTATTTTACCCCATGTGTCCTCAGATTT...GGGGGCCAAGTCACAGGTTGGCCAGAAAACCCTGGTAAGTAATGAGGGCTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp ATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACACTGTGTGGACTAAGGTaGCAGGCTTTTAATTTCCTC +
Preference number: 4 (lower is better)
Translates to: IQHESLMVHIWGDCGVCTLCGLR*QAFNFL
Trigger: GAGGAAATTAAAAGCCTGCCACCTTAGTCCACACAG...TGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp CACAGAGTGAATATCCTGAGCCCCTGTCAAATGACGGAGCATGGGGTCATCCAGAGCTCTTGCCTTTCTTaGAACTTAATTCCCCCAACT +
Preference number: 4 (lower is better)
Translates to: HRVNILSPCQMTEHGVIQSSCLS*NLIPPT
Trigger: AGTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAGCT...CTGGATGACCCCATGCTCCGTCATTTGACAGGGGCTCAGGATATTCACTCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp TGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCTTCACATCTTCTATCCTCTaGATGTCAGTTCTGTCGGAT +
Preference number: 4 (lower is better)
Translates to: WQKGTDWRKDPCVAGESFTSSIL*MSVLSD
Trigger: ATCCGACAGAACTGACATGCAGAGGATAGAAGATGT...GAAGCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR GCA 90 bp CCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGAAGTGTTCTGCTCATTCCAGACCACTGTaGAAACTCAGCCCTCATTAC +
Preference number: 4 (lower is better)
Translates to: PGPLQLPNINLHRLKCSAHSRPL*KLSPHY
Trigger: GTAATGAGGGCTGAGTTTGCACAGTGGTCTGGAATG...AGCAGAACACTTCAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp GGGAAGAGGACAGGTGAGCATTCAATTAAGCAGGCGATGGAAATCTTAAACCTGATAATCCCTGGGGTCTaGTCAGTGGATGGGCAACTC +
Preference number: 4 (lower is better)
Translates to: GKRTGEHSIKQAMEILNLIIPGV*SVDGQL
Trigger: GAGTTGCCCATCCACTGAGCAGACCCCAGGGATTAT...CAGGTTTAAGATTTCCATCGCCTGCTTAATTGAATGCTCACCTGTCCTCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp AGGTGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCCAAAAGTTTGGAGTTTaGCAAATGCGCAGTTTATGG +
Preference number: 4 (lower is better)
Translates to: RWQKGTDWRKDPCVAGESQKFGV*QMRSLW
Trigger: CCATAAACTGCGCATTTGGCAAACTCCAAACTTTTG...GCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CCAGCACATGACTGGCCATCACCTAAACTGGGAAATCTCAAGGACTGGGACTGCGGAGCTCCAGTTAAATaGCTTAACATTTACCAGCAC +
Preference number: 4 (lower is better)
Translates to: PAHDWPSPKLGNLKDWDCGAPVK*LNIYQH
Trigger: GTGCTGGTAAATGTTAAGCCATTTAACTGGAGCTCC...GCAGTCCCAGTCCTTGAGATTTCCCAGTTTAGGTGATGGCCAGTCATGTGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp CTGCTGATTTGGAATTTGGTTCCAGGACATAAATCTGAGGACACATGGGGTAAAGGGCTGGATAATCCCTaGGGTCTGCTCAGTGGATGG +
Preference number: 4 (lower is better)
Translates to: LLIWNLVPGHKSEDTWGKGLDNP*GLLSGW
Trigger: CCATCCACTGAGCAGACCCCAGGGATTATCCAGCCC...TTTACCCCATGTGTCCTCAGATTTATGTCCTGGAACCAAATTCCAAATCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp ATCTGTGTTCTCACATCCTTGCTACACTGCCTCTGTCATCTTGAATCATGCGAGCTCACCCTGACAGCCTaGATAACCTGGAACAAGTCC +
Preference number: 4 (lower is better)
Translates to: ICVLTSLLHCLCHLESCELTLTA*ITWNKS
Trigger: GGACTTGTTCCAGGTTATCCAGGCTGTCAGGGTGAG...CTCGCATGATTCAAGATGACAGAGGCAGTGTAGCAAGGATGTGAGAACACAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GGGAGGTGTGAAGGGGGCAGGGAATATTGGAGGGTAATAGGAGATATTTTGAGGGGGCAGTCATTGTACTaGGAGTGGAAAATCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GRCEGGREYWRVIGDILRGQSLY*EWKILF
Trigger: GAAGAGGATTTTCCACTCCCAGTACAATGACTGCCC...CCTCAAAATATCTCCTATTACCCTCCAATATTCCCTGCCCCCTTCACACCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp ACTTGCATGGGAGTCAGGCCAGGGGTGTCATTGACCTTGAGCTCTTGCCTTTCTAAACCTGGAAACAACTaGGGTAAGACATCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: TCMGVRPGVSLTLSSCLSKPGNN*GKTSSQ
Trigger: CTGAGAAGATGTCTTACCCCAGTTGTTTCCAGGTTT...AGAAAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCTGACTCCCATGCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CACAGAGTGAATATCCTGAGCCCCTGTCAAATGACGGAGCATGGGGTCATCCAGAGGGGACTTTTCATGTaGCTGCTGATTTGGAATTTG +
Preference number: 4 (lower is better)
Translates to: HRVNILSPCQMTEHGVIQRGLFM*LLIWNL
Trigger: CAAATTCCAAATCAGCAGCCACATGAAAAGTCCCCT...CTGGATGACCCCATGCTCCGTCATTTGACAGGGGCTCAGGATATTCACTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CAA 72 bp GGGAGTCAGGCCAGGGGTGTCATTGACCTTGAGCTCTaGCCTTTCTTGAAACTTAATTCCCCCAACTTATAC +
Preference number: 4 (lower is better)
Translates to: GSQARGVIDLEL*PFLKLNSPNLY
Trigger: GTATAAGTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCTGACTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
3UTR CAA 72 bp CCACCTTCTAATACCATCACCTTGGCAGTTGGGATTTaGACATATGGATTTGTGGGGCGGGGGACACAAACA +
Preference number: 4 (lower is better)
Translates to: PPSNTITLAVGI*TYGFVGRGTQT
Trigger: TGTTTGTGTCCCCCGCCCCACAAATCCATATGTCAAAATCCCAACTGCCAAGGTGATGGTATTAGAAGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR GCA 90 bp CAGGCCAGGGGTGTCATTGACCTTGAGCTCTTGCCTTTCTTGAAACTTAATTCCGTGTTCTCACATCCTTaGTACACTGCCTCTGTCATC +
Preference number: 4 (lower is better)
Translates to: QARGVIDLELLPFLKLNSVFSHP*YTASVI
Trigger: GATGACAGAGGCAGTGTAGCAAGGATGTGAGAACAC...GGAATTAAGTTTCAAGAAAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp AGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCTCCGGAGCTCCAGTTAAATaGCTTAACATTTACCAGCAC +
Preference number: 4 (lower is better)
Translates to: RLWYVILVSHLPLWACFSGAPVK*LNIYQH
Trigger: GTGCTGGTAAATGTTAAGCCATTTAACTGGAGCTCC...GGAGAAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp AGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCTCCTTTGCACCATGGAAATaGGCAGTTCTACAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: RLWYVILVSHLPLWACFSFAPWK*AVLQRR
Trigger: CCTTCTTTGTAGAACTGCCCATTTCCATGGTGCAAA...GGAGAAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CCA 90 bp ACTTGCATGGGAGTCAGGCCAGGGGTGTCATTGACCTTGAGCTCTTGCCTTTCTCATCACCTTGGCAGTTaGGATTTTGACATATGGATT +
Preference number: 4 (lower is better)
Translates to: TCMGVRPGVSLTLSSCLSHHLGS*DFDIWI
Trigger: AATCCATATGTCAAAATCCCAACTGCCAAGGTGATG...AGAAAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCTGACTCCCATGCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR TCA 90 bp CTCTTGCCTTTCTTGAAACTTAATTCCCCCAACTTATACACACAAACGATGACTCGGGTTCCTCACTCATaGATGCACACGCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: LLPFLKLNSPNLYTQTMTRVPHS*MHTPGP
Trigger: AGGTCCAGGCGTGTGCATTCATGAGTGAGGAACCCG...AGTCATCGTTTGTGTGTATAAGTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp TATGATATTAGTCCCCAGATGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCTATACACACAAACGATaGCTAGGGGTTATGGGAACA +
Preference number: 4 (lower is better)
Translates to: YDISPQMFISWAGGTPQSYTHKR*LGVMGT
Trigger: TGTTCCCATAACCCCTAGTCATCGTTTGTGTGTATA...GCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACATCTGGGGACTAATATCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR TCA 90 bp ACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCTCCATAGCTCTTGCCTTTCTTaGAACTTAATTCCCCCAACT +
Preference number: 4 (lower is better)
Translates to: TLVCDLGKPPSSLGLFLHSSCLS*NLIPPT
Trigger: AGTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAGCT...ATGGAGAAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp ATCCCTGATATGAGACTACTCCTGAGACAGCTAGTGAGAAGGCAGGTGGCAGAAGGAAAATCAAACAGTTaGATGTTTGTGCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: IPDMRLLLRQLVRRQVAEGKSNS*MFVPHC
Trigger: GCAGTGAGGCACAAACATGCAACTGTTTGATTTTCC...TTCTGCCACCTGCCTTCTCACTAGCTGTCTCAGGAGTAGTCTCATATCAGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CTTGACCTGGAGCAACCATGTGTGGATAACATGTTGCTTAGGGCCTCTTCTAACCGTGATGTTTCACAATaGCCTTCAGGAGTTAAGAGC +
Preference number: 4 (lower is better)
Translates to: LDLEQPCVDNMLLRASSNRDVSQ*PSGVKS
Trigger: GCTCTTAACTCCTGAAGGCCATTGTGAAACATCACG...GTTAGAAGAGGCCCTAAGCAACATGTTATCCACACATGGTTGCTCCAGGTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GGGAAGAGGACAGGTGAGCATTCAATTAAGCAGGCGATGGAAATCTTAAACCTGTATATCCTCACATGGTaGAAAGAGGGTGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GKRTGEHSIKQAMEILNLYILTW*KEGEEL
Trigger: GAGCTCCTCACCCTCTTTCCACCATGTGAGGATATA...CAGGTTTAAGATTTCCATCGCCTGCTTAATTGAATGCTCACCTGTCCTCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp AGGTGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCCGGGAAAAGAGGTATTaGTATTACCAGTTCAATTTT +
Preference number: 4 (lower is better)
Translates to: RWQKGTDWRKDPCVAGESREKRY*YYQFNF
Trigger: AAAATTGAACTGGTAATACCAATACCTCTTTTCCCG...GCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp AGCATGGGTGGGAGGAAAATCAAACAGTTGCATGTTTGTGCCTCACTGCATTGTAGCAGGGAGCATGGGTaGGAGGAAAATCAAACAGTT +
Preference number: 4 (lower is better)
Translates to: SMGGRKIKQLHVCASLHCSREHG*EENQTV
Trigger: AACTGTTTGATTTTCCTCCCACCCATGCTCCCTGCT...ACAATGCAGTGAGGCACAAACATGCAACTGTTTGATTTTCCTCCCACCCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp TATGATATTAGTCCCCAGATGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCTGCGCAGTTTATGGATaGGAAAGGAAAATCACACGT +
Preference number: 4 (lower is better)
Translates to: YDISPQMFISWAGGTPQSCAVYG*ERKITR
Trigger: ACGTGTGATTTTCCTTTCCCATCCATAAACTGCGCA...GCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACATCTGGGGACTAATATCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp GGGGACACAAACATTCAGTTCCTAACAGCCACATTTGGTAAAAATGGGACTCAGCTACACGCTGAACCCTaGGCACCATGGATTCAAAGA +
Preference number: 4 (lower is better)
Translates to: GDTNIQFLTATFGKNGTQLHAEP*APWIQR
Trigger: TCTTTGAATCCATGGTGCCCAGGGTTCAGCGTGTAG...CTGAGTCCCATTTTTACCAAATGTGGCTGTTAGGAACTGAATGTTTGTGTCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CAA 72 bp TACTTCCCAAAGGCCCCACCTTCTAATACCATCACCTaGGCAGTTGGGATTTTGACATATGGATTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: YFPKAPPSNTIT*AVGILTYGFVG
Trigger: CCCCACAAATCCATATGTCAAAATCCCAACTGCCAAGGTGATGGTATTAGAAGGTGGGGCCTTTGGGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp TCCATTCCAGACCACTGTGCAAACTCAGCCCTCATTACTTACCAGGGTTTTCTGCTGCTCCTAGATCTGTaGACTCTTAATGAAGTGAGA +
Preference number: 4 (lower is better)
Translates to: SIPDHCANSALITYQGFLLLLDL*TLNEVR
Trigger: TCTCACTTCATTAAGAGTCCACAGATCTAGGAGCAG...CAGAAAACCCTGGTAAGTAATGAGGGCTGAGTTTGCACAGTGGTCTGGAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CTCTTGCCTTTCTTGAAACTTAATTCCCCCAACTTATACACACAAACGATGACTAGACCGACGCTCCCGTaGAGACAAAGTTCAACCACG +
Preference number: 4 (lower is better)
Translates to: LLPFLKLNSPNLYTQTMTRPTLP*RQSSTT
Trigger: CGTGGTTGAACTTTGTCTCCACGGGAGCGTCGGTCT...AGTCATCGTTTGTGTGTATAAGTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393596.2
3UTR CAA 72 bp GCCAGGGGTGTCATTGACCTTGAGCTCTTGCCTTTCTaGAAACTTAATTCCCCCAACTTATACACACAAACG +
Preference number: 4 (lower is better)
Translates to: ARGVIDLELLPF*KLNSPNLYTQT
Trigger: CGTTTGTGTGTATAAGTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAGCTCAAGGTCAATGACACCCCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp CTCTTGCCTTTCTTGAAACTTAATTCCCCCAACTTATACACACAAACGATGACTCAGATGTTCATCTCTTaGGCTGGGGGTACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LLPFLKLNSPNLYTQTMTQMFIS*AGGTPQ
Trigger: CTGAGGAGTACCCCCAGCCCAAGAGATGAACATCTG...AGTCATCGTTTGTGTGTATAAGTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CCA 90 bp AGCATGGGTGGGAGGAAAATCAAACAGTTGCATGTTTGTGCCTCACTGCATTGTATGTGGCTGCTGATTTaGAATTTGGTTCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: SMGGRKIKQLHVCASLHCMWLLI*NLVPGH
Trigger: ATGTCCTGGAACCAAATTCCAAATCAGCAGCCACAT...ACAATGCAGTGAGGCACAAACATGCAACTGTTTGATTTTCCTCCCACCCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CTCTTGCCTTTCTTGAAACTTAATTCCCCCAACTTATACACACAAACGATGACTACTTGGATCTGGACCTaGAACCTCCAAGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LLPFLKLNSPNLYTQTMTTWIWT*NLQALE
Trigger: TTCCAGAGCTTGGAGGTTCCAGGTCCAGATCCAAGT...AGTCATCGTTTGTGTGTATAAGTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311131.6
CDS-3UTR CCA 90 bp CACTGGCCAGACACACTGTCCTCTCCTTCAAAACATGTATCCCAATGTGGTTACAATTATGGTCTTACTTaGGCTGAAAATAGCATGAGG +
Preference number: 4 (lower is better)
Translates to: HWPDTLSSPSKHVSQCGYNYGLT*AENSMR
Trigger: CCTCATGCTATTTTCAGCCCAAGTAAGACCATAATT...GTAACCACATTGGGATACATGTTTTGAAGGAGAGGACAGTGTGTCTGGCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CTCTTGCCTTTCTTGAAACTTAATTCCCCCAACTTATACACACAAACGATGACTCTCAGCTCCAGACTCTaGTATGTGATCTTGGTAAGC +
Preference number: 4 (lower is better)
Translates to: LLPFLKLNSPNLYTQTMTLSSRL*YVILVS
Trigger: GCTTACCAAGATCACATACCAGAGTCTGGAGCTGAG...AGTCATCGTTTGTGTGTATAAGTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR GCA 90 bp CTCTTGCCTTTCTTGAAACTTAATTCCCCCAACTTATACACACAAACGATGACTTTGGAGTTTGCCAAATaGGCAGTTTATGGATGGGAA +
Preference number: 4 (lower is better)
Translates to: LLPFLKLNSPNLYTQTMTLEFAK*AVYGWE
Trigger: TTCCCATCCATAAACTGCGCATTTGGCAAACTCCAA...AGTCATCGTTTGTGTGTATAAGTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CCA 90 bp CTGCTGATTTGGAATTTGGTTCCAGGACATAAATCTGAGGACACATGGGGTAAAGTTTTTACAAAGGTGTaGACTGATGTTTGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: LLIWNLVPGHKSEDTWGKVFTKV*TDVWRV
Trigger: AACTCTCCAAACATCAGTCCACACCTTTGTAAAAAC...TTTACCCCATGTGTCCTCAGATTTATGTCCTGGAACCAAATTCCAAATCAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CAA 72 bp ACTTTGTTACCCAAAAGTGACTCAAAAGTTTGGAGTTaGCCAAATGCGCAGTTTATGGATGGGAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: TLLPKSDSKVWS*PNAQFMDGKGK
Trigger: TTTTCCTTTCCCATCCATAAACTGCGCATTTGGCAAACTCCAAACTTTTGAGTCACTTTTGGGTAACAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
3UTR CAA 72 bp TCAATTAAGCAGGCGATGGAAATCTTAAACCTGACTTaGTTACCCAAAAGTGACTCAAAAGTTTGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: SIKQAMEILNLT*LPKSDSKVWSL
Trigger: CAAACTCCAAACTTTTGAGTCACTTTTGGGTAACAAAGTCAGGTTTAAGATTTCCATCGCCTGCTTAATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS GCA 90 bp CGCTTCTCCTCTCAGGGTGCCGTCGCCGCCGCTCCCGGGTGCCAGTaGCCGGGTCCCGCCGCAGCCGCAGAGACCCACGTGCCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: RFSSQGAVAAAPGCQ*PGPAAAAETHVPGS
Trigger: GCTCCCAGGCACGTGGGTCTCTGCGGCTGCGGCGGGACCCGGGCACTGGCACCCGGGAGCGGCGGCGACGGCACCCTGAGAGGAGAAGCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS GCA 90 bp ACAAGGGGCTCCTCTCGCCACTGCGCTGCGCTTCTCCTCTCAGGGTaGCGTCGCCGCCGCTCCCGGGTGCCAGTGCCCGGGTCCCGCCGC +
Preference number: 5 (lower is better)
Translates to: TRGSSRHCAALLLSG*RRRRSRVPVPGSRR
Trigger: GCGGCGGGACCCGGGCACTGGCACCCGGGAGCGGCGGCGACGGCACCCTGAGAGGAGAAGCGCAGCGCAGTGGCGAGAGGAGCCCCTTGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS CCA 90 bp GTGCCAGTGCCCGGGTCCCGCCGCAGCCGCAGAGACCCACGTGCCTaGGAGCCCGGCTACCCACCTCCCTGCGCTGTTCCCCAACCCCGA +
Preference number: 5 (lower is better)
Translates to: VPVPGSRRSRRDPRA*EPGYPPPCAVPQPR
Trigger: TCGGGGTTGGGGAACAGCGCAGGGAGGTGGGTAGCCGGGCTCCCAGGCACGTGGGTCTCTGCGGCTGCGGCGGGACCCGGGCACTGGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS TCA 90 bp CCGAGGTGTCGTGGCAGGTTACGCGGCCCCCGCGCGCGCTGGTGGTaGCAAAGTAGAGCACGGGGGCCTGGCAGGCCAGCACCAACACCC +
Preference number: 5 (lower is better)
Translates to: PRCRGRLRGPRARWW*QSRARGPGRPAPTP
Trigger: GGGTGTTGGTGCTGGCCTGCCAGGCCCCCGTGCTCTACTTTGTCACCACCAGCGCGCGCGGGGGCCGCGTAACCTGCCACGACACCTCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS GCA 90 bp AAAGTTCAACCACGGACCCACAGGCGCGTTCAAGCCGTCCAGTTATaGGCTACACGCCGGCTCGCAACTGTGCCCCGGGGCGACAGCCGC +
Preference number: 5 (lower is better)
Translates to: KVQPRTHRRVQAVQL*ATRRLATVPRGDSR
Trigger: GCGGCTGTCGCCCCGGGGCACAGTTGCGAGCCGGCGTGTAGCGCATAACTGGACGGCTTGAACGCGCCTGTGGGTCCGTGGTTGAACTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393596.2
CDS-3UTR CAA 90 bp GCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACTCAGCCCCGCACGGACTTGCGCTaGGCCCTAGGCAGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: AKSTVAPSPFQTTVQTQPRTDLR*ALGRPP
Trigger: GGGCGGCCTGCCTAGGGCCAAGCGCAAGTCCGTGCG...GGGCTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp GGCCGTGGGTGGAGCCCCCAGGGACAGGGGGTGACTGGCCCTGCCTGGCCCATTTCCAACCTAGGTACCTaGGCAGTACAGCCAGCTACT +
Preference number: 5 (lower is better)
Translates to: GRGWSPQGQGVTGPAWPISNLGT*AVQPAT
Trigger: AGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGA...AATGGGCCAGGCAGGGCCAGTCACCCCCTGTCCCTGGGGGCTCCACCCACGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS GCA 90 bp CCAGGTCAGGATGCTCAGCGCCTGCACGGGTTCCTCACTCATGAATaGACACGCCTGGACCTGGACCGGGCTGCAGGGAACTCTGCGGGA +
Preference number: 5 (lower is better)
Translates to: PGQDAQRLHGFLTHE*TRLDLDRAAGNSAG
Trigger: TCCCGCAGAGTTCCCTGCAGCCCGGTCCAGGTCCAGGCGTGTGCATTCATGAGTGAGGAACCCGTGCAGGCGCTGAGCATCCTGACCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS TCA 90 bp CTCTCCAGGTCAGGATGCTCAGCGCCTGCACGGGTTCCTCACTCATaGATGCACACGCCTGGACCTGGACCGGGCTGCAGGGAACTCTGC +
Preference number: 5 (lower is better)
Translates to: LSRSGCSAPARVPHS*MHTPGPGPGCRELC
Trigger: GCAGAGTTCCCTGCAGCCCGGTCCAGGTCCAGGCGTGTGCATTCATGAGTGAGGAACCCGTGCAGGCGCTGAGCATCCTGACCTGGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS TCA 90 bp AAGGATGACGGCAAAGGGCACCGCGAAGAGCAGGCCCAGCATGACTaGGCTGTAGGCCACGAAGCGGCTGAAGAGCTCGGGTGCCGAGGT +
Preference number: 5 (lower is better)
Translates to: KDDGKGHREEQAQHD*AVGHEAAEELGCRG
Trigger: ACCTCGGCACCCGAGCTCTTCAGCCGCTTCGTGGCCTACAGCTCAGTCATGCTGGGCCTGCTCTTCGCGGTGCCCTTTGCCGTCATCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp AGTATAAGTTACAGCCTCACACTGGCTCCTAGCCCATGGGAGCCTCCAGATGGGCGCACGGACTTGCGCTaGGCCCTAGGCAGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: SISYSLTLAPSPWEPPDGRTDLR*ALGRPP
Trigger: GGGCGGCCTGCCTAGGGCCAAGCGCAAGTCCGTGCG...CCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACTTATACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp CTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATATGGTGCGCACGGACTaGCGCTTGGCCCTAGGCAGG +
Preference number: 5 (lower is better)
Translates to: LLGWGYSSELSPPWHPVHMVRTD*RLALGR
Trigger: CCTGCCTAGGGCCAAGCGCAAGTCCGTGCGCACCAT...ATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS GCA 90 bp GGATCTGGACCTGGAACCTCCAAGCTCTGGAACCTGACCAGCCCCTaGTCTCCAGGTCAGGATGCTCAGCGCCTGCACGGGTTCCTCACT +
Preference number: 5 (lower is better)
Translates to: GSGPGTSKLWNLTSP*SPGQDAQRLHGFLT
Trigger: AGTGAGGAACCCGTGCAGGCGCTGAGCATCCTGACCTGGAGAGCAGGGGCTGGTCAGGTTCCAGAGCTTGGAGGTTCCAGGTCCAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311131.6
CDS-3UTR CAA 90 bp CATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTCGCACGGACTTGCGCTaGGCCCTAGGCAGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: HESLMVHIWGDCGVCTSPRTDLR*ALGRPP
Trigger: GGGCGGCCTGCCTAGGGCCAAGCGCAAGTCCGTGCG...AGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp AGTTACAGCCTCACACTGGCTCCTAGCCCATGGGAGCCTCCAGATGGGTCTATGGGGCCAGTGGGTGGCTaGGCATCTCGGGCAAAGCGT +
Preference number: 5 (lower is better)
Translates to: SYSLTLAPSPWEPPDGSMGPVGG*ASRAKR
Trigger: ACGCTTTGCCCGAGATGCCAAGCCACCCACTGGCCC...CATAGACCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp CATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCTGGCCAACCTGTGACTaGGCCCCCACCCCAGGTAGC +
Preference number: 5 (lower is better)
Translates to: HIWGDCGVCTSPGPLQLPWPTCD*APTPGS
Trigger: GCTACCTGGGGTGGGGGCCAAGTCACAGGTTGGCCA...GGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS CCA 90 bp AGCGCCTGCACGGGTTCCTCACTCATGAATGCACACGCCTGGACCTaGACCGGGCTGCAGGGAACTCTGCGGGAAACAGGAAAAACAGGT +
Preference number: 5 (lower is better)
Translates to: SACTGSSLMNAHAWT*TGLQGTLRETGKTG
Trigger: ACCTGTTTTTCCTGTTTCCCGCAGAGTTCCCTGCAGCCCGGTCCAGGTCCAGGCGTGTGCATTCATGAGTGAGGAACCCGTGCAGGCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS CCA 90 bp ATGCTCAGCGCCTGCACGGGTTCCTCACTCATGAATGCACACGCCTaGACCTGGACCGGGCTGCAGGGAACTCTGCGGGAAACAGGAAAA +
Preference number: 5 (lower is better)
Translates to: MLSACTGSSLMNAHA*TWTGLQGTLRETGK
Trigger: TTTTCCTGTTTCCCGCAGAGTTCCCTGCAGCCCGGTCCAGGTCCAGGCGTGTGCATTCATGAGTGAGGAACCCGTGCAGGCGCTGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp TCCAGACATCGCACTGTGTGGCTCTGTGTGGCGGCAGTGGGGTCACTTCACTTCAGGAAGCGCACCAGCTaGCAGAGCACCGTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: SRHRTVWLCVAAVGSLHFRKRTS*QSTVLK
Trigger: CTTCAGCACGGTGCTCTGCAAGCTGGTGCGCTTCCT...GAAGTGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp ATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGATGGTGCGCACGGACTaGCGCTTGGCCCTAGGCAGG +
Preference number: 5 (lower is better)
Translates to: MVHIWGDCGVCTSPGPLQMVRTD*RLALGR
Trigger: CCTGCCTAGGGCCAAGCGCAAGTCCGTGCGCACCAT...CTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp AGGTGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCGGGCCAGTGGGTGGCTaGGCATCTCGGGCAAAGCGT +
Preference number: 5 (lower is better)
Translates to: RWQKGTDWRKDPCVAGESGPVGG*ASRAKR
Trigger: ACGCTTTGCCCGAGATGCCAAGCCACCCACTGGCCC...GCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CAA 90 bp AGTATAAGTTACAGCCTCACACTGGCTCCTAGCCCATGGGAGCCTCCAGATGGGTGGCCAACCTGTGACTaGGCCCCCACCCCAGGTAGC +
Preference number: 5 (lower is better)
Translates to: SISYSLTLAPSPWEPPDGWPTCD*APTPGS
Trigger: GCTACCTGGGGTGGGGGCCAAGTCACAGGTTGGCCA...CCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACTTATACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS GCA 90 bp GCGCCCCTAGGGGACCTGACACAGCCACCTGACCAGGGCTTTCATTaGCATCTGACTTGGATCTGGACCTGGAACCTCCAAGCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: APLGDLTQPPDQGFH*HLTWIWTWNLQALE
Trigger: TTCCAGAGCTTGGAGGTTCCAGGTCCAGATCCAAGTCAGATGGCAATGAAAGCCCTGGTCAGGTGGCTGTGTCAGGTCCCCTAGGGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311131.6
CDS CCA 90 bp AGCAGCGGCAGGGAGGCCGCATACAGTGCATCAGACACAGCCAGGTaGAACATATATGTGGTGGACGCATTCCAGGTCTTGAGGCGGCAC +
Preference number: 5 (lower is better)
Translates to: SSGREAAYSASDTAR*NIYVVDAFQVLRRH
Trigger: GTGCCGCCTCAAGACCTGGAATGCGTCCACCACATATATGTTCCACCTGGCTGTGTCTGATGCACTGTATGCGGCCTCCCTGCCGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp GCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACTCAGCCCGGCAGCAGCACGTACTaGAAGTCCTCGTTGAAGCGG +
Preference number: 5 (lower is better)
Translates to: AKSTVAPSPFQTTVQTQPGSSTY*KSSLKR
Trigger: CCGCTTCAACGAGGACTTCAAGTACGTGCTGCTGCC...GGGCTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp CTGGACTCCAACCTAGGTACCTTGGCAGTACAGCCAGCTACTTGCATGGGAGTCAGCCCCAACCCTGCCTaGAGCCTGGAGTCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: LDSNLGTLAVQPATCMGVSPNPA*SLESAV
Trigger: GACAGCTGACTCCAGGCTCAAGGCAGGGTTGGGGCT...GACTCCCATGCAAGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGAGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp AGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACTCAGGGGGTGCCAGCATGGTaGGGATCTGGTGAGGGACCT +
Preference number: 5 (lower is better)
Translates to: RAKSTVAPSPFQTTVQTQGVPAW*GSGEGP
Trigger: AGGTCCCTCACCAGATCCCAACCATGCTGGCACCCC...CTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS CCA 90 bp ACACAGCCACCTGACCAGGGCTTTCATTGCCATCTGACTTGGATCTaGACCTGGAACCTCCAAGCTCTGGAACCTGACCAGCCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: TQPPDQGFHCHLTWI*TWNLQALEPDQPLL
Trigger: GAGCAGGGGCTGGTCAGGTTCCAGAGCTTGGAGGTTCCAGGTCCAGATCCAAGTCAGATGGCAATGAAAGCCCTGGTCAGGTGGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311131.6
CDS-3UTR CAA 90 bp CTGGACTCCAACCTAGGTACCTTGGCAGTACAGCCAGCTACTTGCATGGGAGTCAGGAAGCGCACCAGCTaGCAGAGCACCGTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LDSNLGTLAVQPATCMGVRKRTS*QSTVLK
Trigger: CTTCAGCACGGTGCTCTGCAAGCTGGTGCGCTTCCT...GACTCCCATGCAAGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGAGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp AGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCTCCATGGTGCGCACGGACTaGCGCTTGGCCCTAGGCAGG +
Preference number: 5 (lower is better)
Translates to: RLWYVILVSHLPLWACFSMVRTD*RLALGR
Trigger: CCTGCCTAGGGCCAAGCGCAAGTCCGTGCGCACCAT...GGAGAAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp CTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCTCCAACCTAGGTACCTaGGCAGTACAGCCAGCTACT +
Preference number: 5 (lower is better)
Translates to: LGVLLRAKSTVAPSPFQTSNLGT*AVQPAT
Trigger: AGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGA...GGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp CCAGCACATGACTGGCCATCACCTAAACTGGGAAATCTCAAGGACTGGGACTGCGCACACCCTGCCCTCTaGCCCCATGTCTTTGCCTGG +
Preference number: 5 (lower is better)
Translates to: PAHDWPSPKLGNLKDWDCAHPAL*PHVFAW
Trigger: CCAGGCAAAGACATGGGGCAAGAGGGCAGGGTGTGC...GCAGTCCCAGTCCTTGAGATTTCCCAGTTTAGGTGATGGCCAGTCATGTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp GGGAGGTGTGAAGGGGGCAGGGAATATTGGAGGGTAATAGGAGATATTTTGAGGGCCCCTCCTGTGTCCTaGTGGAGTGGCTCGGGCCTG +
Preference number: 5 (lower is better)
Translates to: GRCEGGREYWRVIGDILRAPPVS*WSGSGL
Trigger: CAGGCCCGAGCCACTCCACAAGGACACAGGAGGGGC...CCTCAAAATATCTCCTATTACCCTCCAATATTCCCTGCCCCCTTCACACCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp CAGGGACCCTGCCCTGATGTCATGCAGTTCATTGAGAACAGCTGCTGCAGGCACTCGTCACCAAGGCACTaGCTTACATCCAGGCGCCAC +
Preference number: 5 (lower is better)
Translates to: QGPCPDVMQFIENSCCRHSSPRH*LTSRRH
Trigger: GTGGCGCCTGGATGTAAGCAAGTGCCTTGGTGACGA...GTGCCTGCAGCAGCTGTTCTCAATGAACTGCATGACATCAGGGCAGGGTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp CATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCGCAAAAACTCCCCATTaGCTGCCTGCCCTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: HIWGDCGVCTSPGPLQLPAKTPH*LPALAQ
Trigger: CTGGGCAAGGGCAGGCAGCAAATGGGGAGTTTTTGC...GGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAGTCTCCCCAGATATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp GGGAGGTGTGAAGGGGGCAGGGAATATTGGAGGGTAATAGGAGATATTTTGAGGGGGGCCTGGAGGGTCTaGGAAATGCCCGGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: GRCEGGREYWRVIGDILRGAWRV*EMPGEQ
Trigger: CTGCTCCCCGGGCATTTCCAAGACCCTCCAGGCCCC...CCTCAAAATATCTCCTATTACCCTCCAATATTCCCTGCCCCCTTCACACCTCCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp CCAAACAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTTGTCCAGGAATTCCCCCATaGGAGGAGGAGTGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: PNNPWGPCQEGKLIPTGCPGIPP*EEEWPG
Trigger: GCCTGGCCACTCCTCCTCCAATGGGGGAATTCCTGG...ACAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS GCA 90 bp GCGGGCGTAGTAATAGACCAGCAGCGGCAGGGAGGCCGCATACAGTaGATCAGACACAGCCAGGTGGAACATATATGTGGTGGACGCATT +
Preference number: 5 (lower is better)
Translates to: AGVVIDQQRQGGRIQ*IRHSQVEHICGGRI
Trigger: AATGCGTCCACCACATATATGTTCCACCTGGCTGTGTCTGATGCACTGTATGCGGCCTCCCTGCCGCTGCTGGTCTATTACTACGCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp CCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGAAGTGTTCTGCTTGGCCAACCTGTGACTaGGCCCCCACCCCAGGTAGC +
Preference number: 5 (lower is better)
Translates to: PGPLQLPNINLHRLKCSAWPTCD*APTPGS
Trigger: GCTACCTGGGGTGGGGGCCAAGTCACAGGTTGGCCA...AGCAGAACACTTCAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp TCCAGACATCGCACTGTGTGGCTCTGTGTGGCGGCAGTGGGGTCACTTCACTTCGGTAGCTTTGGTGACTaGACCTGGAGCAACCATGTG +
Preference number: 5 (lower is better)
Translates to: SRHRTVWLCVAAVGSLHFGSFGD*TWSNHV
Trigger: CACATGGTTGCTCCAGGTCAAGTCACCAAAGCTACC...GAAGTGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp GGGGTCATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCCTGGAGCTAATGAAGTaGGCTGAGGCAGTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: GVIQHESLMVHIWGDCGVLELMK*AEAVGA
Trigger: TGCTCCCACTGCCTCAGCCAACTTCATTAGCTCCAG...GACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGATGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp CAGGGACCCTGCCCTGATGTCATGCAGTTCATTGAGAACAGCTGCTGCAGGCACTCTTCTCAGGGTTCCTaGCCCCAGCTCTCTACACAC +
Preference number: 5 (lower is better)
Translates to: QGPCPDVMQFIENSCCRHSSQGS*PQLSTH
Trigger: GTGTGTAGAGAGCTGGGGCAAGGAACCCTGAGAAGA...GTGCCTGCAGCAGCTGTTCTCAATGAACTGCATGACATCAGGGCAGGGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp TCCATTCCAGACCACTGTGCAAACTCAGCCCTCATTACTTACCAGGGTTTTCTGGGGCCAGTGGGTGGCTaGGCATCTCGGGCAAAGCGT +
Preference number: 5 (lower is better)
Translates to: SIPDHCANSALITYQGFLGPVGG*ASRAKR
Trigger: ACGCTTTGCCCGAGATGCCAAGCCACCCACTGGCCC...CAGAAAACCCTGGTAAGTAATGAGGGCTGAGTTTGCACAGTGGTCTGGAATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp CTGGGGCCTGGAGAGAGGATCCCTGATATGAGACTACTCCTGAGACAGCTAGTGCCAGATGTTCATCTCTaGGGCTGGGGGTACTCCTCA +
Preference number: 5 (lower is better)
Translates to: LGPGERIPDMRLLLRQLVPDVHL*GWGYSS
Trigger: TGAGGAGTACCCCCAGCCCAAGAGATGAACATCTGG...CACTAGCTGTCTCAGGAGTAGTCTCATATCAGGGATCCTCTCTCCAGGCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CAA 90 bp AGGTGGCAGAAGGGAACGGATTGGAGAAAGGACCCTTGTGTGGCTGGTGAAAGCACTGCCTCTGTCATCTaGAATCATGCGAGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: RWQKGTDWRKDPCVAGESTASVI*NHARGH
Trigger: GTGGCCCCTCGCATGATTCAAGATGACAGAGGCAGT...GCTTTCACCAGCCACACAAGGGTCCTTTCTCCAATCCGTTCCCTTCTGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS TCA 90 bp ACACAGCCAGGTGGAACATATATGTGGTGGACGCATTCCAGGTCTTaGGGCGGCACAAGAAGATGTAGAGCGCCACGGCGTTCAGACACA +
Preference number: 5 (lower is better)
Translates to: TQPGGTYMWWTHSRS*GGTRRCRAPRRSDT
Trigger: TGTGTCTGAACGCCGTGGCGCTCTACATCTTCTTGTGCCGCCTCAAGACCTGGAATGCGTCCACCACATATATGTTCCACCTGGCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp AGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCTCCGGCAGCAGCACGTACTaGAAGTCCTCGTTGAAGCGG +
Preference number: 5 (lower is better)
Translates to: RLWYVILVSHLPLWACFSGSSTY*KSSLKR
Trigger: CCGCTTCAACGAGGACTTCAAGTACGTGCTGCTGCC...GGAGAAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp AGAGCTAAGTCCACCGTGGCACCCAGTCCATTCCAGACCACTGTGCAAACTCAGGGGTTATGGGAACAGTaGACTCTGGACCACAGAGTG +
Preference number: 5 (lower is better)
Translates to: RAKSTVAPSPFQTTVQTQGLWEQ*TLDHRV
Trigger: CACTCTGTGGTCCAGAGTCAACTGTTCCCATAACCC...CTGAGTTTGCACAGTGGTCTGGAATGGACTGGGTGCCACGGTGGACTTAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp CCAGCACATGACTGGCCATCACCTAAACTGGGAAATCTCAAGGACTGGGACTGCCCAGATGTTCATCTCTaGGGCTGGGGGTACTCCTCA +
Preference number: 5 (lower is better)
Translates to: PAHDWPSPKLGNLKDWDCPDVHL*GWGYSS
Trigger: TGAGGAGTACCCCCAGCCCAAGAGATGAACATCTGG...GCAGTCCCAGTCCTTGAGATTTCCCAGTTTAGGTGATGGCCAGTCATGTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311131.6
ENST00000393597.7
CDS-3UTR CAA 90 bp AGCTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTCCAGATGTTCATCTCTaGGGCTGGGGGTACTCCTCA +
Preference number: 5 (lower is better)
Translates to: SSRLWYVILVSHLPLWACPDVHL*GWGYSS
Trigger: TGAGGAGTACCCCCAGCCCAAGAGATGAACATCTGG...ACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp CTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTACGTATGGCCCACTGTaGCTCACTGGCCAGACACAC +
Preference number: 5 (lower is better)
Translates to: LQTLVCDLGKPPSSLGLFTYGPL*LTGQTH
Trigger: GTGTGTCTGGCCAGTGAGCAACAGTGGGCCATACGT...AAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp CACTGGCCAGACACACTGTCCTCTCCTTCAAAACATGTATCCCAATGTGGTTACCCCGGGGAGCAGCTGTaGGTTGTGCCTTCACTGAGG +
Preference number: 5 (lower is better)
Translates to: HWPDTLSSPSKHVSQCGYPGEQL*VVPSLR
Trigger: CCTCAGTGAAGGCACAACCAACAGCTGCTCCCCGGG...GTAACCACATTGGGATACATGTTTTGAAGGAGAGGACAGTGTGTCTGGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp CCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGAAGTGTTCTGCTGGCAGCAGCACGTACTaGAAGTCCTCGTTGAAGCGG +
Preference number: 5 (lower is better)
Translates to: PGPLQLPNINLHRLKCSAGSSTY*KSSLKR
Trigger: CCGCTTCAACGAGGACTTCAAGTACGTGCTGCTGCC...AGCAGAACACTTCAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp CTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCAGACGCATTCCAGGTCTaGAGGCGGCACAAGAAGATG +
Preference number: 5 (lower is better)
Translates to: LWRLHKSWSSTASQYKPADAFQV*RRHKKM
Trigger: CATCTTCTTGTGCCGCCTCAAGACCTGGAATGCGTC...TGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp AGCTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTGGGTTATGGGAACAGTaGACTCTGGACCACAGAGTG +
Preference number: 5 (lower is better)
Translates to: SSRLWYVILVSHLPLWACGLWEQ*TLDHRV
Trigger: CACTCTGTGGTCCAGAGTCAACTGTTCCCATAACCC...ACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp GTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGAGGCCAGGGGTGTCATaGACCTTGAGCTCTTGCCTT +
Preference number: 5 (lower is better)
Translates to: VCTSPGPLQLPNINLHRLRPGVS*TLSSCL
Trigger: AAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCT...CAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp CGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTAGGCCAGGGGTGTCATaGACCTTGAGCTCTTGCCTT +
Preference number: 5 (lower is better)
Translates to: RLHKSWSSTASQYKPAQARPGVS*TLSSCL
Trigger: AAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCT...AGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp CGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTAGGGAGTCCCTGTCCTaGAGATCAAGAGTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: RLHKSWSSTASQYKPAQARESLS*RSRVRP
Trigger: AGGCCTCACTCTTGATCTCAAGGACAGGGACTCCCT...AGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp GGGGTCATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCCAAATACAGCAAGCTTaGGGGATGTCCTGCCTTTCA +
Preference number: 5 (lower is better)
Translates to: GVIQHESLMVHIWGDCGVQIQQA*GMSCLS
Trigger: TGAAAGGCAGGACATCCCCAAAGCTTGCTGTATTTG...GACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGATGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp CACAGAGTGAATATCCTGAGCCCCTGTCAAATGACGGAGCATGGGGTCATCCAGGCAAGATTAGGTAACTaGCCCAAGAGACCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: HRVNILSPCQMTEHGVIQARLGN*PKRPQP
Trigger: TGGCTGGGGTCTCTTGGGCAAGTTACCTAATCTTGC...CTGGATGACCCCATGCTCCGTCATTTGACAGGGGCTCAGGATATTCACTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp ACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCTCCATGCAGGGCAAAGAGGCTaGGAAACTAGGGGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: TLVCDLGKPPSSLGLFLHAGQRG*ETRGRR
Trigger: TCTCCTGCCCCTAGTTTCCAAGCCTCTTTGCCCTGC...ATGGAGAAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp CAGGGACCCTGCCCTGATGTCATGCAGTTCATTGAGAACAGCTGCTGCAGGCACCCCCACGTTTTACAATaGCTTTGGTCACAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: QGPCPDVMQFIENSCCRHPHVLQ*LWSQRQ
Trigger: CTGCCTTTGTGACCAAAGCAATTGTAAAACGTGGGG...GTGCCTGCAGCAGCTGTTCTCAATGAACTGCATGACATCAGGGCAGGGTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS GCA 90 bp TCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGAAGTGTTCTaGTCCTACAGCCGAATGTCCTTAGTGTTCTCGCTACCAGCCGGC +
Preference number: 5 (lower is better)
Translates to: SSTASQYKPAQAEVF*SYSRMSLVFSLPAG
Trigger: GCCGGCTGGTAGCGAGAACACTAAGGACATTCGGCTGTAGGAGCAGAACACTTCAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp CGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGGGTTATGGGAACAGTaGACTCTGGACCACAGAGTG +
Preference number: 5 (lower is better)
Translates to: RLHKSWSSTASQYKPAQAGLWEQ*TLDHRV
Trigger: CACTCTGTGGTCCAGAGTCAACTGTTCCCATAACCC...AGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp TATGATATTAGTCCCCAGATGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCAGGCCAGGGGTGTCATaGACCTTGAGCTCTTGCCTT +
Preference number: 5 (lower is better)
Translates to: YDISPQMFISWAGGTPQSRPGVS*TLSSCL
Trigger: AAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCT...GCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACATCTGGGGACTAATATCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp CTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTTCCAACCTAGGTACCTaGGCAGTACAGCCAGCTACT +
Preference number: 5 (lower is better)
Translates to: LQTLVCDLGKPPSSLGLFSNLGT*AVQPAT
Trigger: AGTAGCTGGCTGTACTGCCAAGGTACCTAGGTTGGA...AAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp CTGTGGCGTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCAACTGAGGTGGGGAAATaGGAACAGGGGAACAGGTCT +
Preference number: 5 (lower is better)
Translates to: LWRLHKSWSSTASQYKPATEVGK*EQGNRS
Trigger: AGACCTGTTCCCCTGTTCCAATTTCCCCACCTCAGT...TGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGACGCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp CTCACTCCAAGGTCAGAGCATGAGCTGCACCTCTCCACCCACACCACTTGGGCTTCTAATACCATCACCTaGGCAGTTGGGATTTTGACA +
Preference number: 5 (lower is better)
Translates to: LTPRSEHELHLSTHTTWASNTIT*AVGILT
Trigger: TGTCAAAATCCCAACTGCCAAGGTGATGGTATTAGA...AGCCCAAGTGGTGTGGGTGGAGAGGTGCAGCTCATGCTCTGACCTTGGAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp ACTCAGCCCTCATTACTTACCAGGGTTTTCTGGCCAACCTGTGACTTGGCCCCCTGTGTGGATAACATGTaGCTTAGGGCCTCTTCTAAC +
Preference number: 5 (lower is better)
Translates to: TQPSLLTRVFWPTCDLAPCVDNM*LRASSN
Trigger: GTTAGAAGAGGCCCTAAGCAACATGTTATCCACACA...GGGGGCCAAGTCACAGGTTGGCCAGAAAACCCTGGTAAGTAATGAGGGCTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp ATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACATGTGTTCTCACATCCTaGCTACACTGCCTCTGTCAT +
Preference number: 5 (lower is better)
Translates to: IQHESLMVHIWGDCGVCTCVLTS*LHCLCH
Trigger: ATGACAGAGGCAGTGTAGCAAGGATGTGAGAACACA...TGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp CTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTCACTTCTCTGGTCACTaGATGCTGGGGAGAAACACT +
Preference number: 5 (lower is better)
Translates to: LQTLVCDLGKPPSSLGLFHFSGH*MLGRNT
Trigger: AGTGTTTCTCCCCAGCATCAAGTGACCAGAGAAGTG...AAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp CTGATTTGCCTCCATAGCCCCCGGCCTGGTGCCAGGCATATAAATGCTGACCACCGTTTTACAATTGCTTaGGTCACAAAGGCAGGTCTA +
Preference number: 5 (lower is better)
Translates to: LICLHSPRPGARHINADHRFTIA*VTKAGL
Trigger: TAGACCTGCCTTTGTGACCAAAGCAATTGTAAAACG...GTGGTCAGCATTTATATGCCTGGCACCAGGCCGGGGGCTATGGAGGCAAATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp ATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAGAGCTCTTGCCTTTCTaGAAACTTAATTCCCCCAAC +
Preference number: 5 (lower is better)
Translates to: IQHESLMVHIWGDCGVCTELLPF*KLNSPN
Trigger: GTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAGCTC...TGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp TGTTCATCTCTTGGGCTGGGGGTACTCCTCAGAGCTAAGTCCACCGTGGCACCCATTGACCTTGAGCTCTaGCCTTTCTTGAAACTTAAT +
Preference number: 5 (lower is better)
Translates to: CSSLGLGVLLRAKSTVAPIDLEL*PFLKLN
Trigger: ATTAAGTTTCAAGAAAGGCAAGAGCTCAAGGTCAAT...GGGTGCCACGGTGGACTTAGCTCTGAGGAGTACCCCCAGCCCAAGAGATGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp CTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTGTAATAGGAGATATTTaGAGGGCAGGCAGATCCCCT +
Preference number: 5 (lower is better)
Translates to: LQTLVCDLGKPPSSLGLFVIGDI*RAGRSP
Trigger: AGGGGATCTGCCTGCCCTCAAAATATCTCCTATTAC...AAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp CCAAACAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTTGTTTGGCAGTTGGGATTTaGACATATGGATTTGTGGGG +
Preference number: 5 (lower is better)
Translates to: PNNPWGPCQEGKLIPTGCLAVGI*TYGFVG
Trigger: CCCCACAAATCCATATGTCAAAATCCCAACTGCCAA...ACAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp CCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGAAGTGTTCTGCTTTTGCAGTCCCAGAATaGGTGATGGCTGAACTGTGC +
Preference number: 5 (lower is better)
Translates to: PGPLQLPNINLHRLKCSAFAVPE*VMAELC
Trigger: GCACAGTTCAGCCATCACCAATTCTGGGACTGCAAA...AGCAGAACACTTCAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp CTCCAGACTCTGGTATGTGATCTTGGTAAGCCACCTTCCTCTCTGGGCCTGTTTGAGCTCTTGCCTTTCTaGAAACTTAATTCCCCCAAC +
Preference number: 5 (lower is better)
Translates to: LQTLVCDLGKPPSSLGLFELLPF*KLNSPN
Trigger: GTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAGCTC...AAACAGGCCCAGAGAGGAAGGTGGCTTACCAAGATCACATACCAGAGTCTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp GGGGTCATCCAGCATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCATTGACCTTGAGCTCTaGCCTTTCTTGAAACTTAAT +
Preference number: 5 (lower is better)
Translates to: GVIQHESLMVHIWGDCGVIDLEL*PFLKLN
Trigger: ATTAAGTTTCAAGAAAGGCAAGAGCTCAAGGTCAAT...GACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATGCTGGATGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp CAGGCCAGGGGTGTCATTGACCTTGAGCTCTTGCCTTTCTTGAAACTTAATTCCACTCATTCCAACTGGTaGTGTCTCCCAGGAGTCTCA +
Preference number: 5 (lower is better)
Translates to: QARGVIDLELLPFLKLNSTHSNW*CLPGVS
Trigger: TGAGACTCCTGGGAGACACAACCAGTTGGAATGAGT...GGAATTAAGTTTCAAGAAAGGCAAGAGCTCAAGGTCAATGACACCCCTGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp GGGAGGTGTGAAGGGGGCAGGGAATATTGGAGGGTAATAGGAGATATTTTGAGGCATGTGGCTGCTGATTaGGAATTTGGTTCCAGGACA +
Preference number: 5 (lower is better)
Translates to: GRCEGGREYWRVIGDILRHVAAD*EFGSRT
Trigger: TGTCCTGGAACCAAATTCCAAATCAGCAGCCACATG...CCTCAAAATATCTCCTATTACCCTCCAATATTCCCTGCCCCCTTCACACCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp CTCTTGCCTTTCTTGAAACTTAATTCCCCCAACTTATACACACAAACGATGACTAGGAAGCGCACCAGCTaGCAGAGCACCGTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LLPFLKLNSPNLYTQTMTRKRTS*QSTVLK
Trigger: CTTCAGCACGGTGCTCTGCAAGCTGGTGCGCTTCCT...AGTCATCGTTTGTGTGTATAAGTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp GCCAAACAATCCCTGGGGTCCCTGCCAGGAGGGAAAACTCATTCCAACTGGTTGATTGACCTTGAGCTCTaGCCTTTCTTGAAACTTAAT +
Preference number: 5 (lower is better)
Translates to: AKQSLGSLPGGKTHSNWLIDLEL*PFLKLN
Trigger: ATTAAGTTTCAAGAAAGGCAAGAGCTCAAGGTCAAT...CAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp CACTGGCCAGACACACTGTCCTCTCCTTCAAAACATGTATCCCAATGTGGTTACAGGGGGCAGGGAATATaGGAGGGTAATAGGAGATAT +
Preference number: 5 (lower is better)
Translates to: HWPDTLSSPSKHVSQCGYRGQGI*EGNRRY
Trigger: ATATCTCCTATTACCCTCCAATATTCCCTGCCCCCT...GTAACCACATTGGGATACATGTTTTGAAGGAGAGGACAGTGTGTCTGGCCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp GTCTGCACAAGTCCTGGTCCTCTACAGCTTCCCAATATAAACCTGCACAGGCTGGTGACTTGTACCTGCTaGCAAGAACCAATTGTTAAA +
Preference number: 5 (lower is better)
Translates to: VCTSPGPLQLPNINLHRLVTCTC*QEPIVK
Trigger: TTTAACAATTGGTTCTTGCAAGCAGGTACAAGTCAC...CAGCCTGTGCAGGTTTATATTGGGAAGCTGTAGAGGACCAGGACTTGTGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp CATGAGTCACTGATGGTCCATATCTGGGGAGACTGTGGCGTCTGCACAAGTCCTATCTTAAACCTGACTTaGTTACCCAAAAGTGACTCA +
Preference number: 5 (lower is better)
Translates to: HESLMVHIWGDCGVCTSPILNLT*LPKSDS
Trigger: TGAGTCACTTTTGGGTAACAAAGTCAGGTTTAAGAT...AGGACTTGTGCAGACGCCACAGTCTCCCCAGATATGGACCATCAGTGACTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp CTCTTGCCTTTCTTGAAACTTAATTCCCCCAACTTATACACACAAACGATGACTGACGCATTCCAGGTCTaGAGGCGGCACAAGAAGATG +
Preference number: 5 (lower is better)
Translates to: LLPFLKLNSPNLYTQTMTDAFQV*RRHKKM
Trigger: CATCTTCTTGTGCCGCCTCAAGACCTGGAATGCGTC...AGTCATCGTTTGTGTGTATAAGTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS-3UTR CAA 90 bp TCCATTCCAGACCACTGTGCAAACTCAGCCCTCATTACTTACCAGGGTTTTCTGAGGAAAATCAAACAGTaGCATGTTTGTGCCTCACTG +
Preference number: 5 (lower is better)
Translates to: SIPDHCANSALITYQGFLRKIKQ*HVCASL
Trigger: CAGTGAGGCACAAACATGCAACTGTTTGATTTTCCT...CAGAAAACCCTGGTAAGTAATGAGGGCTGAGTTTGCACAGTGGTCTGGAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp GGGGACACAAACATTCAGTTCCTAACAGCCACATTTGGTAAAAATGGGACTCAGGAGCTCTTGCCTTTCTaGAAACTTAATTCCCCCAAC +
Preference number: 5 (lower is better)
Translates to: GDTNIQFLTATFGKNGTQELLPF*KLNSPN
Trigger: GTTGGGGGAATTAAGTTTCAAGAAAGGCAAGAGCTC...CTGAGTCCCATTTTTACCAAATGTGGCTGTTAGGAACTGAATGTTTGTGTCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS-3UTR CAA 90 bp AGCATGGGTGGGAGGAAAATCAAACAGTTGCATGTTTGTGCCTCACTGCATTGTCTGCTGATTTGGAATTaGGTTCCAGGACATAAATCT +
Preference number: 5 (lower is better)
Translates to: SMGGRKIKQLHVCASLHCLLIWN*VPGHKS
Trigger: AGATTTATGTCCTGGAACCAAATTCCAAATCAGCAG...ACAATGCAGTGAGGCACAAACATGCAACTGTTTGATTTTCCTCCCACCCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393597.7
CDS GCA 72 bp CCGTCCAGTTATGCGCTACACGCCGGCTCGCAACTGTaGCCCGGGGCGACAGCCGCTCCACAGCGCCCTCCC +
Preference number: 6 (lower is better)
Translates to: PSSYALHAGSQL*PGATAAPQRPP
Trigger: GGGAGGGCGCTGTGGAGCGGCTGTCGCCCCGGGGCACAGTTGCGAGCCGGCGTGTAGCGCATAACTGGACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393596.2
CDS CCA 72 bp ACGAAGCGGCTGAAGAGCTCGGGTGCCGAGGTGTCGTaGCAGGTTACGCGGCCCCCGCGCGCGCTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: TKRLKSSGAEVS*QVTRPPRALVV
Trigger: CACCACCAGCGCGCGCGGGGGCCGCGTAACCTGCCACGACACCTCGGCACCCGAGCTCTTCAGCCGCTTCGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS CAA 72 bp AAGACAGCCAGCACCACGGCGATGGTGCGCACGGACTaGCGCTTGGCCCTAGGCAGGCCGCCCGAGGTCCCG +
Preference number: 6 (lower is better)
Translates to: KTASTTAMVRTD*RLALGRPPEVP
Trigger: CGGGACCTCGGGCGGCCTGCCTAGGGCCAAGCGCAAGTCCGTGCGCACCATCGCCGTGGTGCTGGCTGTCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS GCA 72 bp CCACGGACCCACAGGCGCGTTCAAGCCGTCCAGTTATaGGCTACACGCCGGCTCGCAACTGTGCCCCGGGGC +
Preference number: 6 (lower is better)
Translates to: PRTHRRVQAVQL*ATRRLATVPRG
Trigger: GCCCCGGGGCACAGTTGCGAGCCGGCGTGTAGCGCATAACTGGACGGCTTGAACGCGCCTGTGGGTCCGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393596.2
CDS GCA 72 bp CCTGGAACCTCCAAGCTCTGGAACCTGACCAGCCCCTaGTCTCCAGGTCAGGATGCTCAGCGCCTGCACGGG +
Preference number: 6 (lower is better)
Translates to: PGTSKLWNLTSP*SPGQDAQRLHG
Trigger: CCCGTGCAGGCGCTGAGCATCCTGACCTGGAGAGCAGGGGCTGGTCAGGTTCCAGAGCTTGGAGGTTCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311131.6
CDS CCA 72 bp CTGCTGCCACAAGGGGCTCCGAGACCGACGCTCCCGTaGAGACAAAGTTCAACCACGGACCCACAGGCGCGT +
Preference number: 6 (lower is better)
Translates to: LLPQGAPRPTLP*RQSSTTDPQAR
Trigger: ACGCGCCTGTGGGTCCGTGGTTGAACTTTGTCTCCACGGGAGCGTCGGTCTCGGAGCCCCTTGTGGCAGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393596.2
CDS TCA 72 bp TCAGGATGCTCAGCGCCTGCACGGGTTCCTCACTCATaGATGCACACGCCTGGACCTGGACCGGGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: SGCSAPARVPHS*MHTPGPGPGCR
Trigger: CCTGCAGCCCGGTCCAGGTCCAGGCGTGTGCATTCATGAGTGAGGAACCCGTGCAGGCGCTGAGCATCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS GCA 72 bp GATGCTCAGCGCCTGCACGGGTTCCTCACTCATGAATaGACACGCCTGGACCTGGACCGGGCTGCAGGGAAC +
Preference number: 6 (lower is better)
Translates to: DAQRLHGFLTHE*TRLDLDRAAGN
Trigger: GTTCCCTGCAGCCCGGTCCAGGTCCAGGCGTGTGCATTCATGAGTGAGGAACCCGTGCAGGCGCTGAGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS GCA 72 bp CCAGCCCCTGCTCTCCAGGTCAGGATGCTCAGCGCCTaGACGGGTTCCTCACTCATGAATGCACACGCCTGG +
Preference number: 6 (lower is better)
Translates to: PAPALQVRMLSA*TGSSLMNAHAW
Trigger: CCAGGCGTGTGCATTCATGAGTGAGGAACCCGTGCAGGCGCTGAGCATCCTGACCTGGAGAGCAGGGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS CCA 72 bp GCCTGCACGGGTTCCTCACTCATGAATGCACACGCCTaGACCTGGACCGGGCTGCAGGGAACTCTGCGGGAA +
Preference number: 6 (lower is better)
Translates to: ACTGSSLMNAHA*TWTGLQGTLRE
Trigger: TTCCCGCAGAGTTCCCTGCAGCCCGGTCCAGGTCCAGGCGTGTGCATTCATGAGTGAGGAACCCGTGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS TCA 72 bp GGTCCAGCGAGCGGAAGGAGTAGTAGAGGGTGCGGGTaGCGTGGAATGGCAGGAAGCAGAGGGCGAAGACAG +
Preference number: 6 (lower is better)
Translates to: GPASGRSSRGCG*RGMAGSRGRRQ
Trigger: CTGTCTTCGCCCTCTGCTTCCTGCCATTCCACGTCACCCGCACCCTCTACTACTCCTTCCGCTCGCTGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS TCA 72 bp ACCTGTAGCCCAGCTCATCCCCATCCCAGGTGCCATTaGTGGTGTCATTCCAGGGGCCCAGGTCTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: TCSPAHPHPRCH*WCHSRGPGLLP
Trigger: TGGCAGCAGACCTGGGCCCCTGGAATGACACCATCAATGGCACCTGGGATGGGGATGAGCTGGGCTACAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS CCA 72 bp ACGGGTTCCTCACTCATGAATGCACACGCCTGGACCTaGACCGGGCTGCAGGGAACTCTGCGGGAAACAGGA +
Preference number: 6 (lower is better)
Translates to: TGSSLMNAHAWT*TGLQGTLRETG
Trigger: TCCTGTTTCCCGCAGAGTTCCCTGCAGCCCGGTCCAGGTCCAGGCGTGTGCATTCATGAGTGAGGAACCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS GCA 72 bp GGGGACCTGACACAGCCACCTGACCAGGGCTTTCATTaGCATCTGACTTGGATCTGGACCTGGAACCTCCAA +
Preference number: 6 (lower is better)
Translates to: GDLTQPPDQGFH*HLTWIWTWNLQ
Trigger: TTGGAGGTTCCAGGTCCAGATCCAAGTCAGATGGCAATGAAAGCCCTGGTCAGGTGGCTGTGTCAGGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311131.6
CDS CCA 72 bp CAGGGCTTTCATTGCCATCTGACTTGGATCTGGACCTaGAACCTCCAAGCTCTGGAACCTGACCAGCCCCTG +
Preference number: 6 (lower is better)
Translates to: QGFHCHLTWIWT*NLQALEPDQPL
Trigger: CAGGGGCTGGTCAGGTTCCAGAGCTTGGAGGTTCCAGGTCCAGATCCAAGTCAGATGGCAATGAAAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311131.6
CDS TCA 72 bp GGTGGAACATATATGTGGTGGACGCATTCCAGGTCTTaGGGCGGCACAAGAAGATGTAGAGCGCCACGGCGT +
Preference number: 6 (lower is better)
Translates to: GGTYMWWTHSRS*GGTRRCRAPRR
Trigger: ACGCCGTGGCGCTCTACATCTTCTTGTGCCGCCTCAAGACCTGGAATGCGTCCACCACATATATGTTCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS CCA 72 bp CCTGACCAGGGCTTTCATTGCCATCTGACTTGGATCTaGACCTGGAACCTCCAAGCTCTGGAACCTGACCAG +
Preference number: 6 (lower is better)
Translates to: PDQGFHCHLTWI*TWNLQALEPDQ
Trigger: CTGGTCAGGTTCCAGAGCTTGGAGGTTCCAGGTCCAGATCCAAGTCAGATGGCAATGAAAGCCCTGGTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311131.6
CDS GCA 72 bp GTAATAGACCAGCAGCGGCAGGGAGGCCGCATACAGTaGATCAGACACAGCCAGGTGGAACATATATGTGGT +
Preference number: 6 (lower is better)
Translates to: VIDQQRQGGRIQ*IRHSQVEHICG
Trigger: ACCACATATATGTTCCACCTGGCTGTGTCTGATGCACTGTATGCGGCCTCCCTGCCGCTGCTGGTCTATTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7
CDS GCA 72 bp GCTTCCCAATATAAACCTGCACAGGCTGAAGTGTTCTaGTCCTACAGCCGAATGTCCTTAGTGTTCTCGCTA +
Preference number: 6 (lower is better)
Translates to: ASQYKPAQAEVF*SYSRMSLVFSL
Trigger: TAGCGAGAACACTAAGGACATTCGGCTGTAGGAGCAGAACACTTCAGCCTGTGCAGGTTTATATTGGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311131.6
ENST00000393596.2
ENST00000393597.7