RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for P2RX6 (Homo sapiens)

Ensembl gene IDs: ENSG00000099957

Ensembl transcript IDs: ENST00000401443.5, ENST00000413302.6, ENST00000422210.5, ENST00000432930.5, ENST00000442475.5, ENST00000452228.5, ENST00000469722.2, ENST00000487342.1

Found 718 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GACTCCCAGCAGCAGTGGCCGTGGGTGCAGGTGCTGAGCTCCGTCTaGGGCACTCGGCCAGTCGGGCTTGGGATGCAAGGGCCAGCTCCC +
Preference number: 1 (lower is better)
Translates to: DSQQQWPWVQVLSSV*GTRPVGLGMQGPAP
Trigger: GGGAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGAGTGCCTCAGACGGAGCTCAGCACCTGCACCCACGGCCACTGCTGCTGGGAGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR GCA 90 bp AGGCCCAGACGCAGCAGGAGCCCCTGCCACATGCAGTCGGAGCCCTaGAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAG +
Preference number: 1 (lower is better)
Translates to: RPRRSRSPCHMQSEP*NTGACWALPVSTGQ
Trigger: CTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCCTGCTGCGTCTGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR GCA 90 bp GGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCCTGCCACATaGAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAG +
Preference number: 1 (lower is better)
Translates to: GERPPGPDAAGAPAT*SRSPAIQVPAGLSQ
Trigger: CTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR TCA 90 bp GAGCTTGGGCCCCAAGGAGGCTGCCTAGAAAGGGCAGCAGGGTTCTaGGCATGGCATGCACCTGAGGCCTGCCTGGCACAGGCACCCCCA +
Preference number: 1 (lower is better)
Translates to: ELGPQGGCLERAAGF*AWHAPEACLAQAPP
Trigger: TGGGGGTGCCTGTGCCAGGCAGGCCTCAGGTGCATGCCATGCTCAGAACCCTGCTGCCCTTTCTAGGCAGCCTCCTTGGGGCCCAAGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR GCA 90 bp CAGCAGGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTaGCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCC +
Preference number: 1 (lower is better)
Translates to: QQEPLPHAVGALQYR*LLGSPSLHGSGSVA
Trigger: GGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR GCA 90 bp AGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCCTaGCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCT +
Preference number: 1 (lower is better)
Translates to: STGRETSRPRRSRSP*HMQSEPCNTGACWA
Trigger: AGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 90 bp GGTGCAGGTGCTGAGCTCCGTCTGAGGCACTCGGCCAGTCGGGCTTaGGATGCAAGGGCCAGCTCCCTCCACACAGAGTTGGCGGTTGCT +
Preference number: 1 (lower is better)
Translates to: GAGAELRLRHSASRA*DARASSLHTELAVA
Trigger: AGCAACCGCCAACTCTGTGTGGAGGGAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGAGTGCCTCAGACGGAGCTCAGCACCTGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR GCA 90 bp AGGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTaGTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCT +
Preference number: 1 (lower is better)
Translates to: RSPCHMQSEPCNTGA*WALPVSTGQVLSPS
Trigger: AGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR GCA 90 bp CATGACATCAGCTTCCTCTGGGCCCCAAGGAGAATCAGGTGCACGTaGCCCTCCTTGGATACCCAGGCCTCAGGGGCCCTGCTCTCCCAC +
Preference number: 1 (lower is better)
Translates to: HDISFLWAPRRIRCT*PSLDTQASGALLSH
Trigger: GTGGGAGAGCAGGGCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCCAGAGGAAGCTGATGTCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 90 bp AGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTaGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAA +
Preference number: 1 (lower is better)
Translates to: SPCHMQSEPCNTGAC*ALPVSTGQVLSPSQ
Trigger: TTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 90 bp CCAGTCGGGCTTGGGATGCAAGGGCCAGCTCCCTCCACACAGAGTTaGCGGTTGCTTTCGGGGCCTTGGCCTCCTCATACTTTGTCCTCC +
Preference number: 1 (lower is better)
Translates to: PVGLGMQGPAPSTQS*RLLSGPWPPHTLSS
Trigger: GGAGGACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGTGGAGGGAGCTGGCCCTTGCATCCCAAGCCCGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 90 bp CCTGATCACCAGGTACCCACAGTGGAAAGCAGCCCCTTGCCTCCCTaGGGTGGACACTTAGAATTCCCTGCCCCGCCCTGGGACCAAGAG +
Preference number: 1 (lower is better)
Translates to: PDHQVPTVESSPLPP*GGHLEFPAPPWDQE
Trigger: CTCTTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGTCCACCCCAGGGAGGCAAGGGGCTGCTTTCCACTGTGGGTACCTGGTGATCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR GCA 90 bp AAGTGCCCAGGCCTGTTCCAGTTACCTTCTAGCCCACCTGGTAGCTaGAGGGCCTCAGTCTTCAGGGGTAGGGTCCCCAAGTCCACCCTG +
Preference number: 1 (lower is better)
Translates to: KCPGLFQLPSSPPGS*RASVFRGRVPKSTL
Trigger: CAGGGTGGACTTGGGGACCCTACCCCTGAAGACTGAGGCCCTGCAGCTACCAGGTGGGCTAGAAGGTAACTGGAACAGGCCTGGGCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR CCA 90 bp CACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATaGCTCCCTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGG +
Preference number: 1 (lower is better)
Translates to: HGSGSVAVSKHSRLL*LPEAAPYQGGSQGR
Trigger: CCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAGGGAGCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 90 bp GGAATGGGTTGGCAAGTGGGTGTCAGAACTTGGACAGGGCCATCCTaGTGTCTGTGTCTGACTCCCAGCAGCAGTGGCCGTGGGTGCAGG +
Preference number: 1 (lower is better)
Translates to: GMGWQVGVRTWTGPS*CLCLTPSSSGRGCR
Trigger: CCTGCACCCACGGCCACTGCTGCTGGGAGTCAGACACAGACACCAGGATGGCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 90 bp GCCCCCAACTCTCAACCAGCAGGGAACGGCTACAGGCTCCCGGAATaGGTTGGCAAGTGGGTGTCAGAACTTGGACAGGGCCATCCTGGT +
Preference number: 1 (lower is better)
Translates to: APNSQPAGNGYRLPE*VGKWVSELGQGHPG
Trigger: ACCAGGATGGCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCCGGGAGCCTGTAGCCGTTCCCTGCTGGTTGAGAGTTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 90 bp GGTGGTGTTGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGCCTaGGATCAGAGCCAGGGCCTCCCTCGAGCAGCTGCCCAGACAGCT +
Preference number: 1 (lower is better)
Translates to: GGVVWNHSFQPLHPA*DQSQGLPRAAAQTA
Trigger: AGCTGTCTGGGCAGCTGCTCGAGGGAGGCCCTGGCTCTGATCCCAGGCTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR GCA 90 bp GTGCGCAGACTGAGGCGACAGCTGTTTCTGAGCTCGGGCCCAGGCTaGAGCTCTCTTGCTGTCTTTGCCCACTCTTCAAGGGCTTTGAGG +
Preference number: 1 (lower is better)
Translates to: VRRLRRQLFLSSGPG*SSLAVFAHSSRALR
Trigger: CCTCAAAGCCCTTGAAGAGTGGGCAAAGACAGCAAGAGAGCTGCAGCCTGGGCCCGAGCTCAGAAACAGCTGTCGCCTCAGTCTGCGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR CCA 90 bp CGGCTACAGGCTCCCGGAATGGGTTGGCAAGTGGGTGTCAGAACTTaGACAGGGCCATCCTGGTGTCTGTGTCTGACTCCCAGCAGCAGT +
Preference number: 1 (lower is better)
Translates to: RLQAPGMGWQVGVRT*TGPSWCLCLTPSSS
Trigger: ACTGCTGCTGGGAGTCAGACACAGACACCAGGATGGCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCCGGGAGCCTGTAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR TCA 90 bp AGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCTCCCTaGGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCT +
Preference number: 1 (lower is better)
Translates to: RFCRRLKTQPTSMAP*GSTLPRWESGEGLS
Trigger: AGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAGGGAGCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 90 bp CAACTCTCAACCAGCAGGGAACGGCTACAGGCTCCCGGAATGGGTTaGCAAGTGGGTGTCAGAACTTGGACAGGGCCATCCTGGTGTCTG +
Preference number: 1 (lower is better)
Translates to: QLSTSRERLQAPGMG*QVGVRTWTGPSWCL
Trigger: CAGACACCAGGATGGCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCCGGGAGCCTGTAGCCGTTCCCTGCTGGTTGAGAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 90 bp GCTGCAAAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTaGAACCATTCCTTCCAGCCACTCCATCCAGCCTGGGATCAGAGC +
Preference number: 1 (lower is better)
Translates to: AAKPGQPEGDLGGVV*NHSFQPLHPAWDQS
Trigger: GCTCTGATCCCAGGCTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR TCA 90 bp CCCTGGGACCAAGAGGAGAATTCCAGCTGCAAAACCTGGCCAGCCTaGGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCC +
Preference number: 1 (lower is better)
Translates to: PWDQEENSSCKTWPA*GRSRWCCLEPFLPA
Trigger: GGCTGGAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTTGCAGCTGGAATTCTCCTCTTGGTCCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR TCA 90 bp TCCCTCGAGCAGCTGCCCAGACAGCTTCCTAGGTATGACTTGGACTaGAGTGAATTTCAGATGTACAGCCTCCCACAGCCTCCCACCCCC +
Preference number: 1 (lower is better)
Translates to: SLEQLPRQLPRYDLD*SEFQMYSLPQPPTP
Trigger: GGGGGTGGGAGGCTGTGGGAGGCTGTACATCTGAAATTCACTTCAGTCCAAGTCATACCTAGGAAGCTGTCTGGGCAGCTGCTCGAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR GCA 90 bp GGTCCTGAAGAACCCAATGATCACCAACTTAGCCCTGCCGCCCTCTaGTCTCTCTCCCAGACCTCCATGGCAAAAGGGCTACCACTGGAA +
Preference number: 1 (lower is better)
Translates to: GPEEPNDHQLSPAAL*SLSQTSMAKGLPLE
Trigger: TTCCAGTGGTAGCCCTTTTGCCATGGAGGTCTGGGAGAGAGAGCAGAGGGCGGCAGGGCTAAGTTGGTGATCATTGGGTTCTTCAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR GCA 90 bp ACTCCATCCAGCCTGGGATCAGAGCCAGGGCCTCCCTCGAGCAGCTaGCCAGACAGCTTCCTAGGTATGACTTGGACTGAAGTGAATTTC +
Preference number: 1 (lower is better)
Translates to: TPSSLGSEPGPPSSS*PDSFLGMTWTEVNF
Trigger: GAAATTCACTTCAGTCCAAGTCATACCTAGGAAGCTGTCTGGGCAGCTGCTCGAGGGAGGCCCTGGCTCTGATCCCAGGCTGGATGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR GCA 90 bp GAGGCGACAGCTGTTTCTGAGCTCGGGCCCAGGCTGCAGCTCTCTTaGTGTCTTTGCCCACTCTTCAAGGGCTTTGAGGTGAAAAGAGTG +
Preference number: 1 (lower is better)
Translates to: EATAVSELGPRLQLS*CLCPLFKGFEVKRV
Trigger: CACTCTTTTCACCTCAAAGCCCTTGAAGAGTGGGCAAAGACAGCAAGAGAGCTGCAGCCTGGGCCCGAGCTCAGAAACAGCTGTCGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR GCA 90 bp CCTGCCCCAGGGAACCAGGCAATTGTCTCCAATCCACATCAAAGATaGTGGGGCTCTCTAAAGAGTAGGTGCCAGTCCTGGGACCACCCT +
Preference number: 1 (lower is better)
Translates to: PAPGNQAIVSNPHQR*WGSLKSRCQSWDHP
Trigger: AGGGTGGTCCCAGGACTGGCACCTACTCTTTAGAGAGCCCCAGCATCTTTGATGTGGATTGGAGACAATTGCCTGGTTCCCTGGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR CCA 90 bp AACTTGCTGAAGGTGACTGTGTTTTTGATGAACAGTGTGAAGTTCTaGGCCTGGGCCAGCAGGGGCCTCGAGGGCACAACGCCACTCTCC +
Preference number: 1 (lower is better)
Translates to: NLLKVTVFLMNSVKF*AWASRGLEGTTPLS
Trigger: GGAGAGTGGCGTTGTGCCCTCGAGGCCCCTGCTGGCCCAGGCCCAGAACTTCACACTGTTCATCAAAAACACAGTCACCTTCAGCAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 90 bp TGGCTTTACTCCGTGACTTTGTCCAGCCATGACATCAGCTTCCTCTaGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACC +
Preference number: 1 (lower is better)
Translates to: WLYSVTLSSHDISFL*APRRIRCTCPSLDT
Trigger: GGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCCAGAGGAAGCTGATGTCATGGCTGGACAAAGTCACGGAGTAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 90 bp GGGCCTCCCTCGAGCAGCTGCCCAGACAGCTTCCTAGGTATGACTTaGACTGAAGTGAATTTCAGATGTACAGCCTCCCACAGCCTCCCA +
Preference number: 1 (lower is better)
Translates to: GPPSSSCPDSFLGMT*TEVNFRCTASHSLP
Trigger: TGGGAGGCTGTGGGAGGCTGTACATCTGAAATTCACTTCAGTCCAAGTCATACCTAGGAAGCTGTCTGGGCAGCTGCTCGAGGGAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR CCA 90 bp GCCCCAGGGAACCAGGCAATTGTCTCCAATCCACATCAAAGATGCTaGGGCTCTCTAAAGAGTAGGTGCCAGTCCTGGGACCACCCTGAG +
Preference number: 1 (lower is better)
Translates to: APGNQAIVSNPHQRC*GSLKSRCQSWDHPE
Trigger: CTCAGGGTGGTCCCAGGACTGGCACCTACTCTTTAGAGAGCCCCAGCATCTTTGATGTGGATTGGAGACAATTGCCTGGTTCCCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR TCA 90 bp CAGGCTGCAGCTCTCTTGCTGTCTTTGCCCACTCTTCAAGGGCTTTaGGGTGAAAAGAGTGTGGCCCTCATGCTCCTACATGGGTGCACA +
Preference number: 1 (lower is better)
Translates to: QAAALLLSLPTLQGL*GEKSVALMLLHGCT
Trigger: TGTGCACCCATGTAGGAGCATGAGGGCCACACTCTTTTCACCTCAAAGCCCTTGAAGAGTGGGCAAAGACAGCAAGAGAGCTGCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR CCA 90 bp TGCTGTCTTTGCCCACTCTTCAAGGGCTTTGAGGTGAAAAGAGTGTaGCCCTCATGCTCCTACATGGGTGCACAAGTGCCCAGGCCTGTT +
Preference number: 1 (lower is better)
Translates to: CCLCPLFKGFEVKRV*PSCSYMGAQVPRPV
Trigger: AACAGGCCTGGGCACTTGTGCACCCATGTAGGAGCATGAGGGCCACACTCTTTTCACCTCAAAGCCCTTGAAGAGTGGGCAAAGACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR TCA 90 bp TGCAGCTCTCTTGCTGTCTTTGCCCACTCTTCAAGGGCTTTGAGGTaGAAAGAGTGTGGCCCTCATGCTCCTACATGGGTGCACAAGTGC +
Preference number: 1 (lower is better)
Translates to: CSSLAVFAHSSRALR*KECGPHAPTWVHKC
Trigger: GCACTTGTGCACCCATGTAGGAGCATGAGGGCCACACTCTTTTCACCTCAAAGCCCTTGAAGAGTGGGCAAAGACAGCAAGAGAGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR GCA 90 bp CTGGCGTATCCACTGTGGCATTCTTTGTGGCACCAAGTCTTCACCTaGCCCAGGGAACCAGGCAATTGTCTCCAATCCACATCAAAGATG +
Preference number: 1 (lower is better)
Translates to: LAYPLWHSLWHQVFT*PREPGNCLQSTSKM
Trigger: CATCTTTGATGTGGATTGGAGACAATTGCCTGGTTCCCTGGGGCAGGTGAAGACTTGGTGCCACAAAGAATGCCACAGTGGATACGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR CCA 90 bp TCCAGTCATGCCTGTAAGGACTACACAGGAAGAGGGTGGCTTTGCTaGCTTTACTCCGTGACTTTGTCCAGCCATGACATCAGCTTCCTC +
Preference number: 1 (lower is better)
Translates to: SSHACKDYTGRGWLC*LYSVTLSSHDISFL
Trigger: GAGGAAGCTGATGTCATGGCTGGACAAAGTCACGGAGTAAAGCCAGCAAAGCCACCCTCTTCCTGTGTAGTCCTTACAGGCATGACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR CCA 90 bp CCCCAACTTTCCAGTCATGCCTGTAAGGACTACACAGGAAGAGGGTaGCTTTGCTGGCTTTACTCCGTGACTTTGTCCAGCCATGACATC +
Preference number: 1 (lower is better)
Translates to: PQLSSHACKDYTGRG*LCWLYSVTLSSHDI
Trigger: GATGTCATGGCTGGACAAAGTCACGGAGTAAAGCCAGCAAAGCCACCCTCTTCCTGTGTAGTCCTTACAGGCATGACTGGAAAGTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR CCA 90 bp CCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTaGCCTGCTGGCGTATCCACTGTGGCATTCTTTGTGGCACCAAGT +
Preference number: 1 (lower is better)
Translates to: PQPKGSIIIIAWPAM*PAGVSTVAFFVAPS
Trigger: ACTTGGTGCCACAAAGAATGCCACAGTGGATACGCCAGCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR GCA 90 bp CTTTCCAGTCATGCCTGTAAGGACTACACAGGAAGAGGGTGGCTTTaGTGGCTTTACTCCGTGACTTTGTCCAGCCATGACATCAGCTTC +
Preference number: 1 (lower is better)
Translates to: LSSHACKDYTGRGWL*WLYSVTLSSHDISF
Trigger: GAAGCTGATGTCATGGCTGGACAAAGTCACGGAGTAAAGCCAGCAAAGCCACCCTCTTCCTGTGTAGTCCTTACAGGCATGACTGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR GCA 90 bp GCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTaGTGGCGTATCCACTGTGGCATTCTTTGTGGCACCAAGTCTTCA +
Preference number: 1 (lower is better)
Translates to: AQGIHNNNCLASHVA*WRIHCGILCGTKSS
Trigger: TGAAGACTTGGTGCCACAAAGAATGCCACAGTGGATACGCCAGCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR CCA 90 bp CAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGCTaGCGTATCCACTGTGGCATTCTTTGTGGCACCAAGTCTTCACCT +
Preference number: 1 (lower is better)
Translates to: QGIHNNNCLASHVAC*RIHCGILCGTKSSP
Trigger: AGGTGAAGACTTGGTGCCACAAAGAATGCCACAGTGGATACGCCAGCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR-3UTR TCA 90 bp TGTGAAGTTCTGGGCCTGGGCCAGCAGGGGCCTCGAGGGCACAACGCCACTCTCCTGGGGCCTCATCCTTaGGATCCCCAGGCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: CEVLGLGQQGPRGHNATLLGPHP*DPQAGP
Trigger: GGGCCCTGCCTGGGGATCTCAAGGATGAGGCCCCAG...GAGAGTGGCGTTGTGCCCTCGAGGCCCCTGCTGGCCCAGGCCCAGAACTTCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR TCA 90 bp ACGCCAGGTCCTCGAAGGTCCCTCCAGCCTTGGCCACGAGGTCCCCAATGCGGACTGGGGCCTCATCCTTaGGATCCCCAGGCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: TPGPRRSLQPWPRGPQCGLGPHP*DPQAGP
Trigger: GGGCCCTGCCTGGGGATCTCAAGGATGAGGCCCCAG...TCCGCATTGGGGACCTCGTGGCCAAGGCTGGAGGGACCTTCGAGGACCTGGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR TCA 90 bp CTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTGTGCTGAGCTCCGTCTaGGGCACTCGGCCAGTCGGG +
Preference number: 2 (lower is better)
Translates to: LRQHPTKVGVRGGTVCWGVLSSV*GTRPVG
Trigger: CCCGACTGGCCGAGTGCCTCAGACGGAGCTCAGCAC...ACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR TCA 90 bp CAGGGGCCCTGCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATCGTGGGTGCAGGTGCTaGGCTCCGTCTGAGGCACTC +
Preference number: 2 (lower is better)
Translates to: QGPCSPTFALQSPPPHGHRGCRC*APSEAL
Trigger: GAGTGCCTCAGACGGAGCTCAGCACCTGCACCCACG...ATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGCAGGGCCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp CAGGCCTCAGGGGCCCTGCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCAGGAGCCCCTGCCACATaGAGTCGGAGCCCTGCAATA +
Preference number: 2 (lower is better)
Translates to: QASGALLSHLRPSEPTSPGAPAT*SRSPAI
Trigger: TATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCC...TGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGCAGGGCCCCTGAGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp CCTGCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGCGCAGCAGGAGCCCCTaGCACATGCAGTCGGAGCCC +
Preference number: 2 (lower is better)
Translates to: PALPPSPFRAHLPMDMALRSRSP*HMQSEP
Trigger: GGGCTCCGACTGCATGTGGCAGGGGCTCCTGCTGCG...CAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp GGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCCTGCCACATGCTCCGCCCTTaGCTGGGGGATAGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: GQSTGRETSRPRRSRSPCHMLRP*LGDREV
Trigger: CACCTCCCTATCCCCCAGGCAAGGGCGGAGCATGTG...GCAGGGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR CCA 90 bp CTGAGGCACTCGGCCAGTCGGGCTTGGGATGCAAGGGCCAGCTCCCTCCACACATCGGCCAGTCGGGCTTaGGATGCAAGGGCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: LRHSASRAWDARASSLHTSASRA*DARASS
Trigger: GGAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGA...TGTGTGGAGGGAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGAGTGCCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR TCA 90 bp CACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCCTGGGGCCTCATCCTTaGGATCCCCAGGCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: HMQSEPCNTGACWALPVSLGPHP*DPQAGP
Trigger: GGGCCCTGCCTGGGGATCTCAAGGATGAGGCCCCAG...GGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR TCA 90 bp GCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCTGGGGCCTCATCCTTaGGATCCCCAGGCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: ATCSRSPAIQVPAGLSQSLGPHP*DPQAGP
Trigger: GGGCCCTGCCTGGGGATCTCAAGGATGAGGCCCCAG...AGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp TCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCCCTGCTCTCCCGCCCTGCAATACAGGTaGCTGCTGGGCTCTCCCAGT +
Preference number: 2 (lower is better)
Translates to: SGARAPPWIPRPQGPCSPALQYR*LLGSPS
Trigger: ACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGC...GGGAGAGCAGGGCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp GGTGCCCAGTGTGACGGCCGTGGGGATGAGCCCGAACTTCCCTGCCTGCCCGGTATGCAGTCGGAGCCCTaGAATACAGGTGCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: GAQCDGRGDEPELPCLPGMQSEP*NTGACW
Trigger: CCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCAT...ACCGGGCAGGCAGGGAAGTTCGGGCTCATCCCCACGGCCGTCACACTGGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp CGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCAGCCACGCCCAGCCAAGCTaGCCCGGTGCCCAGTGTGAC +
Preference number: 2 (lower is better)
Translates to: RPSEPTSPWTWLWRLRGSHAQPS*PGAQCD
Trigger: GTCACACTGGGCACCGGGGCAGCTTGGCTGGGCGTG...GCTGCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp GGGCCTGGGCCAGCAGGGGCCTCGAGGGCACAACGCCACTCTCCACGGGGCACCATCTCACAGGTCCTGTaGGTCCCATTGAACACCACA +
Preference number: 2 (lower is better)
Translates to: GPGPAGASRAQRHSPRGTISQVL*VPLNTT
Trigger: TGTGGTGTTCAATGGGACCCACAGGACCTGTGAGAT...GGTGCCCCGTGGAGAGTGGCGTTGTGCCCTCGAGGCCCCTGCTGGCCCAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
ENST00000452228.5
3UTR-3UTR CCA 90 bp CCCTTGCCTCCCTGGGGTGGACACTTAGAATTCCCTGCCCCGCCCTGGGACCAACAGCAGCAGTGGCCGTaGGTGCAGGTGCTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: PLPPWGGHLEFPAPPWDQQQQWP*VQVLSS
Trigger: GGAGCTCAGCACCTGCACCCACGGCCACTGCTGCTG...TTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGTCCACCCCAGGGAGGCAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp CTGGGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCACCCCCAATCCTCCATaGTGGGGCCTCATCCTTGAG +
Preference number: 2 (lower is better)
Translates to: LGTEHWERDLQAQTQQEPTPNPP*WGLILE
Trigger: CTCAAGGATGAGGCCCCAGCATGGAGGATTGGGGGT...GGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp GGCTACAGGCTCCCGGAATGGGTTGGCAAGTGGGTGTCAGAACTTGGACAGGGCCACGCCCAGCCAAGCTaGCCCGGTGCCCAGTGTGAC +
Preference number: 2 (lower is better)
Translates to: GYRLPEWVGKWVSELGQGHAQPS*PGAQCD
Trigger: GTCACACTGGGCACCGGGGCAGCTTGGCTGGGCGTG...GCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCCGGGAGCCTGTAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp TCCCTGCCCCGCCCTGGGACCAAGAGGAGAATTCCAGCTGCAAAACCTGGCCAGTGGGCCCAAGACACATaGTCCGCCCTTGCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: SLPRPGTKRRIPAAKPGQWAQDT*SALAWG
Trigger: CCCCCAGGCAAGGGCGGAGCATGTGTCTTGGGCCCA...CTGGCCAGGTTTTGCAGCTGGAATTCTCCTCTTGGTCCCAGGGCGGGGCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR CCA 90 bp CTGAGGCACTCGGCCAGTCGGGCTTGGGATGCAAGGGCCAGCTCCCTCCACACAAGCACCCTACCAAGGTaGGAGTCAGGGGAGGGACTG +
Preference number: 2 (lower is better)
Translates to: LRHSASRAWDARASSLHTSTLPR*ESGEGL
Trigger: CAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCT...TGTGTGGAGGGAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGAGTGCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp CTGGGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCAATACAGGTGCCTGCTaGGCTCTCCCAGTCTCCACG +
Preference number: 2 (lower is better)
Translates to: LGTEHWERDLQAQTQQEPNTGAC*ALPVST
Trigger: CGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATT...GGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp TTGCCTCCCTGGGGTGGACACTTAGAATTCCCTGCCCCGCCCTGGGACCAAGAGCAGCAGCAGTGGCCGTaGGTGCAGGTGCTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: LPPWGGHLEFPAPPWDQEQQQWP*VQVLSS
Trigger: GGAGCTCAGCACCTGCACCCACGGCCACTGCTGCTG...CTCTTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGTCCACCCCAGGGAGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp TGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGTCCAAGGGGTTGGGCTaGGGGGTTACCGAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: CSRSPAIQVPAGLSQSPRSKGLG*GVTEEG
Trigger: TCCCTCCTCGGTAACCCCCCAGCCCAACCCCTTGGA...CCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR TCA 90 bp GGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCCGGGACAGTAGGGGCTaGATTGTGGTTCATAGCGGC +
Preference number: 2 (lower is better)
Translates to: GAPATCSRSPAIQVPAGLRDSRG*IVVHSG
Trigger: GCCGCTATGAACCACAATTCAGCCCCTACTGTCCCG...GAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR TCA 90 bp CCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGCGTGGGTGCAGGTGCTaGGCTCCGTCTGAGGCACTC +
Preference number: 2 (lower is better)
Translates to: PPSPFRAHLPMDMALEIERGCRC*APSEAL
Trigger: GAGTGCCTCAGACGGAGCTCAGCACCTGCACCCACG...CTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp GGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCAGGGGAGGGACTGTCTaGTGGGGTTCAAGGGTGGAA +
Preference number: 2 (lower is better)
Translates to: GAPATCSRSPAIQVPAGLRGGTV*WGSRVE
Trigger: TTCCACCCTTGAACCCCAGCAGACAGTCCCTCCCCT...GAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp AGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCGCCCTGCAATACAGGTaGCTGCTGGGCTCTCCCAGT +
Preference number: 2 (lower is better)
Translates to: SRSPAIQVPAGLSQSPRVALQYR*LLGSPS
Trigger: ACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGC...GACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp TGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGCACAGAGTTGGCGGTTaGTTTCGGGGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: CSRSPAIQVPAGLSQSPRHRVGG*FRGLGL
Trigger: GAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTG...CCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp CCTGCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGCCTCCCTCGAGCAGCTaGCCAGACAGCTTCCTAGGT +
Preference number: 2 (lower is better)
Translates to: PALPPSPFRAHLPMDMALPPSSS*PDSFLG
Trigger: ACCTAGGAAGCTGTCTGGGCAGCTGCTCGAGGGAGG...CAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR GCA 90 bp AGGGAACGGCTACAGGCTCCCGGAATGGGTTGGCAAGTGGGTGTCAGAACTTGGCACCGTGGCTGTGTGTaGCTCCCTCCCCTTCGGGGC +
Preference number: 2 (lower is better)
Translates to: RERLQAPGMGWQVGVRTWHRGCV*LPPLRG
Trigger: GCCCCGAAGGGGAGGGAGGCACACACAGCCACGGTG...CCAAGTTCTGACACCCACTTGCCAACCCATTCCGGGAGCCTGTAGCCGTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432930.5
3UTR-3UTR CCA 90 bp CAGCAGGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGAGCACCCTACCAAGGTaGGAGTCAGGGGAGGGACTG +
Preference number: 2 (lower is better)
Translates to: QQEPLPHAVGALQYRCLLSTLPR*ESGEGL
Trigger: CAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCT...CAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp GTGGCAGATCCAGGGAGCAGAGCTTGGGCCCCAAGGAGGCTGCCTAGAAAGGGCCACAGCCGACTTCTATaGCTCCCTGAGGCAGCACCC +
Preference number: 2 (lower is better)
Translates to: VADPGSRAWAPRRLPRKGHSRLL*LPEAAP
Trigger: GGGTGCTGCCTCAGGGAGCCATAGAAGTCGGCTGTG...GCCCTTTCTAGGCAGCCTCCTTGGGGCCCAAGCTCTGCTCCCTGGATCTGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR-3UTR CCA 90 bp GGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCCTGCTCTACCTTGCCTTTTTaGCTCCAGCTGCACAGCCCC +
Preference number: 2 (lower is better)
Translates to: GQSTGRETSRPRRSRSPCSTLPF*LQLHSP
Trigger: GGGGCTGTGCAGCTGGAGCCAAAAAGGCAAGGTAGA...GCAGGGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR CCA 90 bp ACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACAGCAGCAGTGGCCGTaGGTGCAGGTGCTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: TCSRSPAIQVPAGLSQSPQQQWP*VQVLSS
Trigger: GGAGCTCAGCACCTGCACCCACGGCCACTGCTGCTG...TGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp GAAGTTCTGGGCCTGGGCCAGCAGGGGCCTCGAGGGCACAACGCCACTCTCCACCCTGTTTTTACACCGTaGCTGTGTGTGCCTCCCTCC +
Preference number: 2 (lower is better)
Translates to: EVLGLGQQGPRGHNATLHPVFTP*LCVPPS
Trigger: GGAGGGAGGCACACACAGCCACGGTGTAAAAACAGG...GTGGAGAGTGGCGTTGTGCCCTCGAGGCCCCTGCTGGCCCAGGCCCAGAACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432930.5
3UTR-3UTR TCA 90 bp CCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCGGTTGCTCCCACCAGTaGGTGGCTGTCCTGAAGTTG +
Preference number: 2 (lower is better)
Translates to: PKENQVHVPLLGYPGLRGGCSHQ*VAVLKL
Trigger: CAACTTCAGGACAGCCACTCACTGGTGGGAGCAACC...GCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp TCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGACCCCCAATCCTCCATaGTGGGGCCTCATCCTTGAG +
Preference number: 2 (lower is better)
Translates to: SEPCNTGACWALPVSTGQTPNPP*WGLILE
Trigger: CTCAAGGATGAGGCCCCAGCATGGAGGATTGGGGGT...CTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp TACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCAGGGGAGGGACTGTCTaGTGGGGTTCAAGGGTGGAA +
Preference number: 2 (lower is better)
Translates to: YRCLLGSPSLHGSGSVAVRGGTV*WGSRVE
Trigger: TTCCACCCTTGAACCCCAGCAGACAGTCCCTCCCCT...GACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp GAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCCCTGCTATGCAGTCGGAGCCCTaGAATACAGGTGCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: ENQVHVPLLGYPGLRGPAMQSEP*NTGACW
Trigger: CCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCAT...AGCAGGGCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp TCCCTGCCCCGCCCTGGGACCAAGAGGAGAATTCCAGCTGCAAAACCTGGCCAGGGAGCCCCTGCCACATaGAGTCGGAGCCCTGCAATA +
Preference number: 2 (lower is better)
Translates to: SLPRPGTKRRIPAAKPGQGAPAT*SRSPAI
Trigger: TATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCC...CTGGCCAGGTTTTGCAGCTGGAATTCTCCTCTTGGTCCCAGGGCGGGGCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp TTCCTCTGGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGCCTCCCTCGAGCAGCTaGCCAGACAGCTTCCTCTGC +
Preference number: 2 (lower is better)
Translates to: FLWAPRRIRCTCPSLDTQPPSSS*PDSFLC
Trigger: GCAGAGGAAGCTGTCTGGGCAGCTGCTCGAGGGAGG...CTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCCAGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422210.5
ENST00000432930.5
3UTR-3UTR GCA 90 bp GGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCGGGAGGTGGATTATCTaGCTACTCCACCCCATTCCC +
Preference number: 2 (lower is better)
Translates to: GAPATCSRSPAIQVPAGLGRWII*LLHPIP
Trigger: GGGAATGGGGTGGAGTAGGCAGATAATCCACCTCCC...GAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR CCA 90 bp CAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCGGAGGGACTGTCTGCTaGGGTTCAAGGGTGGAATTC +
Preference number: 2 (lower is better)
Translates to: QVPAGLSQSPRVRFCRRLGGTVC*GSRVEF
Trigger: GAATTCCACCCTTGAACCCCAGCAGACAGTCCCTCC...GAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp GCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTAGCACCCTACCAAGGTaGGAGTCAGGGGAGGGACTG +
Preference number: 2 (lower is better)
Translates to: ATCSRSPAIQVPAGLSQSSTLPR*ESGEGL
Trigger: CAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCT...AGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp CCCTGGCCCTCCACAGCTTGCCCTGATCACCAGGTACCCACAGTGGAAAGCAGCCACAGCCGACTTCTATaGCTCCCTGAGGCAGCACCC +
Preference number: 2 (lower is better)
Translates to: PWPSTACPDHQVPTVESSHSRLL*LPEAAP
Trigger: GGGTGCTGCCTCAGGGAGCCATAGAAGTCGGCTGTG...GCTGCTTTCCACTGTGGGTACCTGGTGATCAGGGCAAGCTGTGGAGGGCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp GCTGGAAGGAGTAGTGAGGCCAGCAGCCAGAGTCCCCGGTGTCCAGGTCACAATCTGGGGACAGAGCACTaGGAGAGAGACCTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: AGRSSEASSQSPRCPGHNLGTEH*ERDLQA
Trigger: GGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCCAG...ATTGTGACCTGGACACCGGGGACTCTGGCTGCTGGCCTCACTACTCCTTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp TGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGTGGACAGGGCCATCCTaGTGTCTGTGTCTGACTCCC +
Preference number: 2 (lower is better)
Translates to: CSRSPAIQVPAGLSQSPRWTGPS*CLCLTP
Trigger: GGGAGTCAGACACAGACACCAGGATGGCCCTGTCCA...CCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp CAGGGGCCCTGCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATAGCCCCTTGCCTCCCTaGGGTGGACACTTAGAATTC +
Preference number: 2 (lower is better)
Translates to: QGPCSPTFALQSPPPHGHSPLPP*GGHLEF
Trigger: GAATTCTAAGTGTCCACCCCAGGGAGGCAAGGGGCT...ATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGCAGGGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp CCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCCACCAGGTACCCACAGTaGAAAGCAGCCCCTTGCCTC +
Preference number: 2 (lower is better)
Translates to: PRRIRCTCPSLDTQASGATRYPQ*KAAPCL
Trigger: GAGGCAAGGGGCTGCTTTCCACTGTGGGTACCTGGT...GGCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp GGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCCTGCTGGGGGATAGGGAGGTaGATTATCTGCCTACTCCAC +
Preference number: 2 (lower is better)
Translates to: GQSTGRETSRPRRSRSPCWGIGR*IICLLH
Trigger: GTGGAGTAGGCAGATAATCCACCTCCCTATCCCCCA...GCAGGGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR CCA 90 bp TGGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCATGCTCCGCCCTTGCCTaGGGGATAGGGAGGTGGATT +
Preference number: 2 (lower is better)
Translates to: WAPRRIRCTCPSLDTQASCSALA*GIGRWI
Trigger: AATCCACCTCCCTATCCCCCAGGCAAGGGCGGAGCA...TGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR TCA 90 bp GGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCATCCCTGCCTGCCCGGTaGCGAGGATGTCGAAGCGGA +
Preference number: 2 (lower is better)
Translates to: GQPEGDLGGVVWNHSFQPSLPAR*RGCRSG
Trigger: TCCGCTTCGACATCCTCGTCACCGGGCAGGCAGGGA...TGGCTGGAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp AAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCCCTTGCAATACAGGTGCCTaGTGGGCTCTCCCAGTCTCC +
Preference number: 2 (lower is better)
Translates to: KENQVHVPLLGYPGLRGPCNTGA*WALPVS
Trigger: GGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCA...AGGGCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp CCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGCCACGAGGTCCCCAATaGGGAACACGGGACAGTAGG +
Preference number: 2 (lower is better)
Translates to: PPSPFRAHLPMDMALEIEPRGPQ*GTRDSR
Trigger: CCTACTGTCCCGTGTTCCGCATTGGGGACCTCGTGG...CTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp CCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCAGCAGGCCACGAGGTCCCCAATaGGGAACACGGGACAGTAGG +
Preference number: 2 (lower is better)
Translates to: PSEPTSPWTWLWRLRGSRPRGPQ*GTRDSR
Trigger: CCTACTGTCCCGTGTTCCGCATTGGGGACCTCGTGG...CCTGCTGCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp GGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGACACTTAGAATTCCCTaGCCCGCCCTGGGACCAAGA +
Preference number: 2 (lower is better)
Translates to: GPQGESGARAPPWIPRPQTLRIP*PALGPR
Trigger: TCTTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGT...CTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp CTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCTCTGGGCCCAAGACACATaGTCCGCCCTTGCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: LHGSGSVAVSKHSRLLWLWAQDT*SALAWG
Trigger: CCCCCAGGCAAGGGCGGAGCATGTGTCTTGGGCCCA...GAGCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR CCA 90 bp GGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAACCCAATCCTCCATGCTaGGGCCTCATCCTTGAGATC +
Preference number: 2 (lower is better)
Translates to: GACWALPVSTGQVLSPSQPNPPC*GLILEI
Trigger: GATCTCAAGGATGAGGCCCCAGCATGGAGGATTGGG...TTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp CCCTTGCCTCCCTGGGGTGGACACTTAGAATTCCCTGCCCCGCCCTGGGACCAACCCAATCCTCCATGCTaGGGCCTCATCCTTGAGATC +
Preference number: 2 (lower is better)
Translates to: PLPPWGGHLEFPAPPWDQPNPPC*GLILEI
Trigger: GATCTCAAGGATGAGGCCCCAGCATGGAGGATTGGG...TTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGTCCACCCCAGGGAGGCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp GAGGCAGCAGGGACCCCAGGCATTTTACTGAGGCTCCAGGTGGCAGGTGATTCTCTGGGGACAGAGCACTaGGAGAGAGACCTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: EAAGTPGILLRLQVAGDSLGTEH*ERDLQA
Trigger: GGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCCAG...AGAATCACCTGCCACCTGGAGCCTCAGTAAAATGCCTGGGGTCCCTGCTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp AAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCCCTTGGACAGGGCCATCCTaGTGTCTGTGTCTGACTCCC +
Preference number: 2 (lower is better)
Translates to: KENQVHVPLLGYPGLRGPWTGPS*CLCLTP
Trigger: GGGAGTCAGACACAGACACCAGGATGGCCCTGTCCA...AGGGCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp GCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGGTGGGTGTCAGAACTTaGACAGGGCCATCCTGGTGT +
Preference number: 2 (lower is better)
Translates to: ALPPSPFRAHLPMDMALEVGVRT*TGPSWC
Trigger: ACACCAGGATGGCCCTGTCCAAGTTCTGACACCCAC...CTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CAA 90 bp GCGGATTCCATAGAGCTTGAGCAGGGTGCGGGCCTCCACACCCGGTaGCTCCCACCAGTGAGTGGCTGTCCTGAAGTTGTAGCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: ADSIELEQGAGLHTR*LPPVSGCPEVVALL
Trigger: GAGAAGAGCTACAACTTCAGGACAGCCACTCACTGGTGGGAGCAACCGGGTGTGGAGGCCCGCACCCTGCTCAAGCTCTATGGAATCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR TCA 90 bp CAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGTCCCTGCCTGCCCGGTaGCGAGGATGTCGAAGCGGA +
Preference number: 2 (lower is better)
Translates to: QSPRVRFCRRLKTQPTSMSLPAR*RGCRSG
Trigger: TCCGCTTCGACATCCTCGTCACCGGGCAGGCAGGGA...CATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp CCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGACCCCCAATCCTCCATaGTGGGGCCTCATCCTTGAG +
Preference number: 2 (lower is better)
Translates to: PPSPFRAHLPMDMALEIETPNPP*WGLILE
Trigger: CTCAAGGATGAGGCCCCAGCATGGAGGATTGGGGGT...CTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp CCCTCCACAGCTTGCCCTGATCACCAGGTACCCACAGTGGAAAGCAGCCCCTTGACCCCCAATCCTCCATaGTGGGGCCTCATCCTTGAG +
Preference number: 2 (lower is better)
Translates to: PSTACPDHQVPTVESSPLTPNPP*WGLILE
Trigger: CTCAAGGATGAGGCCCCAGCATGGAGGATTGGGGGT...CAAGGGGCTGCTTTCCACTGTGGGTACCTGGTGATCAGGGCAAGCTGTGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp GCTCCCGGAATGGGTTGGCAAGTGGGTGTCAGAACTTGGACAGGGCCATCCTGGAGGGGAGGGACTGTCTaGTGGGGTTCAAGGGTGGAA +
Preference number: 2 (lower is better)
Translates to: APGMGWQVGVRTWTGPSWRGGTV*WGSRVE
Trigger: TTCCACCCTTGAACCCCAGCAGACAGTCCCTCCCCT...CCAGGATGGCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCCGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp GAGGCAGCAGGGACCCCAGGCATTTTACTGAGGCTCCAGGTGGCAGGTGATTCTGGAGCCCCTGCCACATaGAGTCGGAGCCCTGCAATA +
Preference number: 2 (lower is better)
Translates to: EAAGTPGILLRLQVAGDSGAPAT*SRSPAI
Trigger: TATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCC...AGAATCACCTGCCACCTGGAGCCTCAGTAAAATGCCTGGGGTCCCTGCTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp TATGGCTCCCTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCCTTTTTGGCTCCAGCTaGACAGCCCCATGTAGGACC +
Preference number: 2 (lower is better)
Translates to: YGSLRQHPTKVGVRGGTVLFGSS*TAPCRT
Trigger: GGTCCTACATGGGGCTGTGCAGCTGGAGCCAAAAAG...GACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAGGGAGCCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR GCA 90 bp CCCGCCCTGGGACCAAGAGGAGAATTCCAGCTGCAAAACCTGGCCAGCCTGAGGCTTTTTGGCTCCAGCTaGACAGCCCCATGTAGGACC +
Preference number: 2 (lower is better)
Translates to: PALGPRGEFQLQNLASLRLFGSS*TAPCRT
Trigger: GGTCCTACATGGGGCTGTGCAGCTGGAGCCAAAAAG...CCTCAGGCTGGCCAGGTTTTGCAGCTGGAATTCTCCTCTTGGTCCCAGGGCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR GCA 90 bp ATCCACTGTGGCATTCTTTGTGGCACCAAGTCTTCACCTGCCCCAGGGAACCAGAGGCCTCAGGGGCCCTaGTCTCCCACCTTCGCCCTT +
Preference number: 2 (lower is better)
Translates to: IHCGILCGTKSSPAPGNQRPQGP*SPTFAL
Trigger: AAGGGCGAAGGTGGGAGAGCAGGGCCCCTGAGGCCT...CTGGTTCCCTGGGGCAGGTGAAGACTTGGTGCCACAAAGAATGCCACAGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR-3UTR GCA 90 bp CCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCGGAAGAGGGTGGCTTTaGTGGCTTTACTCCGTGACT +
Preference number: 2 (lower is better)
Translates to: PKENQVHVPLLGYPGLRGGRGWL*WLYSVT
Trigger: AGTCACGGAGTAAAGCCAGCAAAGCCACCCTCTTCC...GCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR-3UTR CCA 90 bp TTGCCTCCCTGGGGTGGACACTTAGAATTCCCTGCCCCGCCCTGGGACCAAGAGCCCAATCCTCCATGCTaGGGCCTCATCCTTGAGATC +
Preference number: 2 (lower is better)
Translates to: LPPWGGHLEFPAPPWDQEPNPPC*GLILEI
Trigger: GATCTCAAGGATGAGGCCCCAGCATGGAGGATTGGG...CTCTTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGTCCACCCCAGGGAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp TACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCGCTGGGGTTCAAGGGTaGAATTCTACCCCCAATCCT +
Preference number: 2 (lower is better)
Translates to: YRCLLGSPSLHGSGSVAVAGVQG*NSTPNP
Trigger: AGGATTGGGGGTAGAATTCCACCCTTGAACCCCAGC...GACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp TATGGCTCCCTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCGGAGGGACTGTCTGCTaGGGTTCAAGGGTGGAATTC +
Preference number: 2 (lower is better)
Translates to: YGSLRQHPTKVGVRGGTVGGTVC*GSRVEF
Trigger: GAATTCCACCCTTGAACCCCAGCAGACAGTCCCTCC...GACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAGGGAGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp CCCCCAACTCTCAACCAGCAGGGAACGGCTACAGGCTCCCGGAATGGGTTGGCAGGAGGGACTGTCTGCTaGGGTTCAAGGGTGGAATTC +
Preference number: 2 (lower is better)
Translates to: PPTLNQQGTATGSRNGLAGGTVC*GSRVEF
Trigger: GAATTCCACCCTTGAACCCCAGCAGACAGTCCCTCC...TGCCAACCCATTCCGGGAGCCTGTAGCCGTTCCCTGCTGGTTGAGAGTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp TGGGGTGGACACTTAGAATTCCCTGCCCCGCCCTGGGACCAAGAGGAGAATTCCAGCACCCTACCAAGGTaGGAGTCAGGGGAGGGACTG +
Preference number: 2 (lower is better)
Translates to: WGGHLEFPAPPWDQEENSSTLPR*ESGEGL
Trigger: CAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCT...GGAATTCTCCTCTTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGTCCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp CCTACAGAGCCACCCAGCAACGCCAGGTCCTCGAAGGTCCCTCCAGCCTTGGCCGTAGGGGCTGAATTGTaGTTCATAGCGGCAGTGCTT +
Preference number: 2 (lower is better)
Translates to: PTEPPSNARSSKVPPALAVGAEL*FIAAVL
Trigger: AAGCACTGCCGCTATGAACCACAATTCAGCCCCTAC...GGCCAAGGCTGGAGGGACCTTCGAGGACCTGGCGTTGCTGGGTGGCTCTGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp AGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCTTGCTTTCGGGGCCTTaGCCTCCTCATACTTTGTCC +
Preference number: 2 (lower is better)
Translates to: SRSPAIQVPAGLSQSPRVLLSGP*PPHTLS
Trigger: GGACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAA...GACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp TCAGCTTCCTCTGGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATATGCTCCGCCCTTGCCTaGGGGATAGGGAGGTGGATT +
Preference number: 2 (lower is better)
Translates to: SASSGPQGESGARAPPWICSALA*GIGRWI
Trigger: AATCCACCTCCCTATCCCCCAGGCAAGGGCGGAGCA...TATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCCAGAGGAAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR CCA 90 bp CTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCTCTCCAAGGGGTTGGGCTaGGGGGTTACCGAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: LHGSGSVAVSKHSRLLWLSKGLG*GVTEEG
Trigger: TCCCTCCTCGGTAACCCCCCAGCCCAACCCCTTGGA...GAGCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR CCA 90 bp CTGGGCCAGCAGGGGCCTCGAGGGCACAACGCCACTCTCCACGGGGCACCAACTTTGAACACCACACACTaGCCTGTTTTTACACCTCTG +
Preference number: 2 (lower is better)
Translates to: LGQQGPRGHNATLHGAPTLNTTH*PVFTPL
Trigger: CAGAGGTGTAAAAACAGGCCAGTGTGTGGTGTTCAA...AGTTGGTGCCCCGTGGAGAGTGGCGTTGTGCCCTCGAGGCCCCTGCTGGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452228.5
3UTR CAA 90 bp CCAACTCTCAACCAGCAGGGAACGGCTACAGGCTCCCGGAATGGGTaGGCAAGTGGGTGTCAGAACTTGGACAGGGCCATCCTGGTGTCT +
Preference number: 2 (lower is better)
Translates to: PTLNQQGTATGSRNG*ASGCQNLDRAILVS
Trigger: AGACACCAGGATGGCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCCGGGAGCCTGTAGCCGTTCCCTGCTGGTTGAGAGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR TCA 90 bp CCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGAGGTCACAATCCCAGTaGACTCTGATGCCTACAGAG +
Preference number: 2 (lower is better)
Translates to: PATCSRSPAIQVPAGLSQRSQSQ*TLMPTE
Trigger: CTCTGTAGGCATCAGAGTTCACTGGGATTGTGACCT...CTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR TCA 90 bp GTGCACAAGTGCCCAGGCCTGTTCCAGTTACCTTCTAGCCCACCTGGTAGCTGCAAAACCTGGCCAGCCTaGGGGAGATCTCGGTGGTGT +
Preference number: 2 (lower is better)
Translates to: VHKCPGLFQLPSSPPGSCKTWPA*GRSRWC
Trigger: ACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTT...GCAGCTACCAGGTGGGCTAGAAGGTAACTGGAACAGGCCTGGGCACTTGTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR-3UTR GCA 90 bp AGCAGGGAACGGCTACAGGCTCCCGGAATGGGTTGGCAAGTGGGTGTCAGAACTAGGGGAGGGACTGTCTaGTGGGGTTCAAGGGTGGAA +
Preference number: 2 (lower is better)
Translates to: SRERLQAPGMGWQVGVRTRGGTV*WGSRVE
Trigger: TTCCACCCTTGAACCCCAGCAGACAGTCCCTCCCCT...AGTTCTGACACCCACTTGCCAACCCATTCCGGGAGCCTGTAGCCGTTCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp CACACAGAGTTGGCGGTTGCTTTCGGGGCCTTGGCCTCCTCATACTTTGTCCTCCACAGAGTTGGCGGTTaGTTTCGGGGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: HTELAVAFGALASSYFVLHRVGG*FRGLGL
Trigger: GAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTG...GAGGACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp CTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCGGGAGGTGGATTATCTaGCTACTCCACCCCATTCCC +
Preference number: 2 (lower is better)
Translates to: LGSPSLHGSGSVAVSKHSGRWII*LLHPIP
Trigger: GGGAATGGGGTGGAGTAGGCAGATAATCCACCTCCC...GCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR CCA 90 bp ACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCAGGAGGGACTGTCTGCTaGGGTTCAAGGGTGGAATTC +
Preference number: 2 (lower is better)
Translates to: TCSRSPAIQVPAGLSQSPGGTVC*GSRVEF
Trigger: GAATTCCACCCTTGAACCCCAGCAGACAGTCCCTCC...TGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp CCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCAGCAGGCCATGGACATGGCTCTaGAGATTGAGAGGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: PSEPTSPWTWLWRLRGSRPWTWL*RLRGSR
Trigger: CCTGCTGCCTCTCAATCTCCAGAGCCATGTCCATGG...CCTGCTGCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp CTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTCCATGGACATGGCTCTaGAGATTGAGAGGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: LPPSPFRAHLPMDMALEIPWTWL*RLRGSR
Trigger: CCTGCTGCCTCTCAATCTCCAGAGCCATGTCCATGG...AATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR TCA 90 bp TGGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAAGGTCACAATCCCAGTaGACTCTGATGCCTACAGAG +
Preference number: 2 (lower is better)
Translates to: WAPRRIRCTCPSLDTQASRSQSQ*TLMPTE
Trigger: CTCTGTAGGCATCAGAGTTCACTGGGATTGTGACCT...TGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR TCA 90 bp GGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCAAAAACCTGGCCAGCCTaGGGGAGATCTCGGTGGTGT +
Preference number: 2 (lower is better)
Translates to: GQPEGDLGGVVWNHSFQPKTWPA*GRSRWC
Trigger: ACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTT...TGGCTGGAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp CACACAGAGTTGGCGGTTGCTTTCGGGGCCTTGGCCTCCTCATACTTTGTCCTCACCCCCAATCCTCCATaGTGGGGCCTCATCCTTGAG +
Preference number: 2 (lower is better)
Translates to: HTELAVAFGALASSYFVLTPNPP*WGLILE
Trigger: CTCAAGGATGAGGCCCCAGCATGGAGGATTGGGGGT...GAGGACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp CACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCTCCCTAGGGGAGGGACTGTCTaGTGGGGTTCAAGGGTGGAA +
Preference number: 2 (lower is better)
Translates to: HGSGSVAVSKHSRLLWLPRGGTV*WGSRVE
Trigger: TTCCACCCTTGAACCCCAGCAGACAGTCCCTCCCCT...AGGGAGCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp CTCCACACAGAGTTGGCGGTTGCTTTCGGGGCCTTGGCCTCCTCATACTTTGTCTGCAATACAGGTGCCTaGTGGGCTCTCCCAGTCTCC +
Preference number: 2 (lower is better)
Translates to: LHTELAVAFGALASSYFVCNTGA*WALPVS
Trigger: GGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCA...GACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp ATCCACTGTGGCATTCTTTGTGGCACCAAGTCTTCACCTGCCCCAGGGAACCAGGCCCTGCAATACAGGTaGCTGCTGGGCTCTCCCAGT +
Preference number: 2 (lower is better)
Translates to: IHCGILCGTKSSPAPGNQALQYR*LLGSPS
Trigger: ACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGC...CTGGTTCCCTGGGGCAGGTGAAGACTTGGTGCCACAAAGAATGCCACAGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR-3UTR GCA 90 bp CTCCACACAGAGTTGGCGGTTGCTTTCGGGGCCTTGGCCTCCTCATACTTTGTCATGCAGTCGGAGCCCTaGAATACAGGTGCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: LHTELAVAFGALASSYFVMQSEP*NTGACW
Trigger: CCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCAT...GACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp CAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGCCTCCCTCGAGCAGCTaGCCAGACAGCTTCCTAGGT +
Preference number: 2 (lower is better)
Translates to: QSPRVRFCRRLKTQPTSMPPSSS*PDSFLG
Trigger: ACCTAGGAAGCTGTCTGGGCAGCTGCTCGAGGGAGG...CATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR GCA 90 bp CCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCAGCAGGAGGCTGCAGCTCTCTTaGTGTCTTTGCCCACTCTTC +
Preference number: 2 (lower is better)
Translates to: PSEPTSPWTWLWRLRGSRRLQLS*CLCPLF
Trigger: GAAGAGTGGGCAAAGACAGCAAGAGAGCTGCAGCCT...CCTGCTGCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR-3UTR CCA 90 bp ACATACAGCAGTAGCAGGTCACAGAAAAAGGTGACCACGCCCAGCCAAGCTGCCCACAGCCGACTTCTATaGCTCCCTGAGGCAGCACCC +
Preference number: 2 (lower is better)
Translates to: TYSSSRSQKKVTTPSQAAHSRLL*LPEAAP
Trigger: GGGTGCTGCCTCAGGGAGCCATAGAAGTCGGCTGTG...GGCAGCTTGGCTGGGCGTGGTCACCTTTTTCTGTGACCTGCTACTGCTGTATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp GGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCAAATACAGGTGCCTGCTaGGCTCTCCCAGTCTCCACG +
Preference number: 2 (lower is better)
Translates to: GQPEGDLGGVVWNHSFQPNTGAC*ALPVST
Trigger: CGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATT...TGGCTGGAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp AAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCCCTATCTCACAGGTCCTGTaGGTCCCATTGAACACCACA +
Preference number: 2 (lower is better)
Translates to: KENQVHVPLLGYPGLRGPISQVL*VPLNTT
Trigger: TGTGGTGTTCAATGGGACCCACAGGACCTGTGAGAT...AGGGCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp CCCGCCCTGGGACCAAGAGGAGAATTCCAGCTGCAAAACCTGGCCAGCCTGAGGATCTCACAGGTCCTGTaGGTCCCATTGAACACCACA +
Preference number: 2 (lower is better)
Translates to: PALGPRGEFQLQNLASLRISQVL*VPLNTT
Trigger: TGTGGTGTTCAATGGGACCCACAGGACCTGTGAGAT...CCTCAGGCTGGCCAGGTTTTGCAGCTGGAATTCTCCTCTTGGTCCCAGGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp CCCCCAACTCTCAACCAGCAGGGAACGGCTACAGGCTCCCGGAATGGGTTGGCAATCTCACAGGTCCTGTaGGTCCCATTGAACACCACA +
Preference number: 2 (lower is better)
Translates to: PPTLNQQGTATGSRNGLAISQVL*VPLNTT
Trigger: TGTGGTGTTCAATGGGACCCACAGGACCTGTGAGAT...TGCCAACCCATTCCGGGAGCCTGTAGCCGTTCCCTGCTGGTTGAGAGTTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp TTGCCTCCCTGGGGTGGACACTTAGAATTCCCTGCCCCGCCCTGGGACCAAGAGGAATGGGTTGGCAAGTaGGTGTCAGAACTTGGACAG +
Preference number: 2 (lower is better)
Translates to: LPPWGGHLEFPAPPWDQEEWVGK*VSELGQ
Trigger: CTGTCCAAGTTCTGACACCCACTTGCCAACCCATTC...CTCTTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGTCCACCCCAGGGAGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp CTGCTCTCTCTCCCAGACCTCCATGGCAAAAGGGCTACCACTGGAAAGCAGCCGAGCCCCTTGCCTCCCTaGGGTGGACACTTAGAATTC +
Preference number: 2 (lower is better)
Translates to: LLSLPDLHGKRATTGKQPSPLPP*GGHLEF
Trigger: GAATTCTAAGTGTCCACCCCAGGGAGGCAAGGGGCT...CGGCTGCTTTCCAGTGGTAGCCCTTTTGCCATGGAGGTCTGGGAGAGAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR CCA 90 bp CCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCCTTGAACACCACACACTaGCCTGTTTTTACACCGTGG +
Preference number: 2 (lower is better)
Translates to: PRRIRCTCPSLDTQASGALNTTH*PVFTPW
Trigger: CCACGGTGTAAAAACAGGCCAGTGTGTGGTGTTCAA...GGCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432930.5
3UTR CAA 90 bp TTCCAGCTGCAAAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTaGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGCCTGGGATC +
Preference number: 2 (lower is better)
Translates to: FQLQNLASLREISVV*FGTIPSSHSIQPGI
Trigger: GATCCCAGGCTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTTGCAGCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR TCA 90 bp CAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGGTTGCTCCCACCAGTaGGTGGCTGTCCTGAAGTTG +
Preference number: 2 (lower is better)
Translates to: QSPRVRFCRRLKTQPTSMGCSHQ*VAVLKL
Trigger: CAACTTCAGGACAGCCACTCACTGGTGGGAGCAACC...CATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp GGTGGTGTTGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGCCTGGGATCAGTGCAATACAGGTGCCTaGTGGGCTCTCCCAGTCTCC +
Preference number: 2 (lower is better)
Translates to: GGVVWNHSFQPLHPAWDQCNTGA*WALPVS
Trigger: GGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCA...CTGATCCCAGGCTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp CACACAGAGTTGGCGGTTGCTTTCGGGGCCTTGGCCTCCTCATACTTTGTCCTCCCCAATCCTCCATGCTaGGGCCTCATCCTTGAGATC +
Preference number: 2 (lower is better)
Translates to: HTELAVAFGALASSYFVLPNPPC*GLILEI
Trigger: GATCTCAAGGATGAGGCCCCAGCATGGAGGATTGGG...GAGGACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp AGAGGAGAATTCCAGCTGCAAAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGGGAGGGACTGTCTGCTaGGGTTCAAGGGTGGAATTC +
Preference number: 2 (lower is better)
Translates to: RGEFQLQNLASLREISVVGGTVC*GSRVEF
Trigger: GAATTCCACCCTTGAACCCCAGCAGACAGTCCCTCC...CACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTTGCAGCTGGAATTCTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp CTGCAAAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTAGCACCCTACCAAGGTaGGAGTCAGGGGAGGGACTG +
Preference number: 2 (lower is better)
Translates to: LQNLASLREISVVLFGTISTLPR*ESGEGL
Trigger: CAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCT...AATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp TGCTGGCTTTACTCCGTGACTTTGTCCAGCCATGACATCAGCTTCCTCTGGGCCAATACAGGTGCCTGCTaGGCTCTCCCAGTCTCCACG +
Preference number: 2 (lower is better)
Translates to: CWLYSVTLSSHDISFLWANTGAC*ALPVST
Trigger: CGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATT...GGCCCAGAGGAAGCTGATGTCATGGCTGGACAAAGTCACGGAGTAAAGCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp GAGGCAGCAGGGACCCCAGGCATTTTACTGAGGCTCCAGGTGGCAGGTGATTCTTGGGGGATAGGGAGGTaGATTATCTGCCTACTCCAC +
Preference number: 2 (lower is better)
Translates to: EAAGTPGILLRLQVAGDSWGIGR*IICLLH
Trigger: GTGGAGTAGGCAGATAATCCACCTCCCTATCCCCCA...AGAATCACCTGCCACCTGGAGCCTCAGTAAAATGCCTGGGGTCCCTGCTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR GCA 90 bp CCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCAGCAGGCATGTCTACCATAGATaGCCCCCAACTTTCCAGTCA +
Preference number: 2 (lower is better)
Translates to: PSEPTSPWTWLWRLRGSRHVYHR*PPTFQS
Trigger: TGACTGGAAAGTTGGGGGGCATCTATGGTAGACATG...CCTGCTGCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR-3UTR CCA 90 bp TCCACATACAGCAGTAGCAGGTCACAGAAAAAGGTGACCACGCCCAGCCAAGCTAATACAGGTGCCTGCTaGGCTCTCCCAGTCTCCACG +
Preference number: 2 (lower is better)
Translates to: STYSSSRSQKKVTTPSQANTGAC*ALPVST
Trigger: CGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATT...AGCTTGGCTGGGCGTGGTCACCTTTTTCTGTGACCTGCTACTGCTGTATGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp CTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGCCTGGGATGCTCCCGGAATGGGTTaGCAAGTGGGTGTCAGAACT +
Preference number: 2 (lower is better)
Translates to: LGGVVWNHSFQPLHPAWDAPGMG*QVGVRT
Trigger: AGTTCTGACACCCACTTGCCAACCCATTCCGGGAGC...ATCCCAGGCTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp CAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGGCTCTCAGGAAGCCTaGAGGAAAGATTCCAAGGGG +
Preference number: 2 (lower is better)
Translates to: QSPRVRFCRRLKTQPTSMGSQEA*RKDSKG
Trigger: CCCCTTGGAATCTTTCCTCCAGGCTTCCTGAGAGCC...CATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR TCA 90 bp CTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGCCTGGGATAATCCCAGTGAACTCTaGTGCCTACAGAGCCACCCA +
Preference number: 2 (lower is better)
Translates to: LGGVVWNHSFQPLHPAWDNPSEL*CLQSHP
Trigger: TGGGTGGCTCTGTAGGCATCAGAGTTCACTGGGATT...ATCCCAGGCTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR TCA 90 bp CTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTAGGTATGACTTGGACTaGAGTGAATTTCAGATGTAC +
Preference number: 2 (lower is better)
Translates to: LRQHPTKVGVRGGTVCWGRYDLD*SEFQMY
Trigger: GTACATCTGAAATTCACTTCAGTCCAAGTCATACCT...ACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR CCA 90 bp TCCCTCCACACAGAGTTGGCGGTTGCTTTCGGGGCCTTGGCCTCCTCATACTTTGTAGGGGCTGAATTGTaGTTCATAGCGGCAGTGCTT +
Preference number: 2 (lower is better)
Translates to: SLHTELAVAFGALASSYFVGAEL*FIAAVL
Trigger: AAGCACTGCCGCTATGAACCACAATTCAGCCCCTAC...AAAGTATGAGGAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGTGGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CCA 90 bp AGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGTACAGGCTCCCGGAATaGGTTGGCAAGTGGGTGTCA +
Preference number: 2 (lower is better)
Translates to: REISVVLFGTIPSSHSIQYRLPE*VGKWVS
Trigger: TGACACCCACTTGCCAACCCATTCCGGGAGCCTGTA...CTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR GCA 90 bp TGTGGCATTCTTTGTGGCACCAAGTCTTCACCTGCCCCAGGGAACCAGGCAATTGTCTCTTCATGGCTGTaGCATGTCTACCATAGATGC +
Preference number: 2 (lower is better)
Translates to: CGILCGTKSSPAPGNQAIVSSWL*HVYHRC
Trigger: GCATCTATGGTAGACATGGCACAGCCATGAAGAGAC...AATTGCCTGGTTCCCTGGGGCAGGTGAAGACTTGGTGCCACAAAGAATGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR-3UTR CCA 90 bp TTCCTCTGGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGTTCCTAGGTATGACTTaGACTGAAGTGAATTTCAGA +
Preference number: 2 (lower is better)
Translates to: FLWAPRRIRCTCPSLDTQFLGMT*TEVNFR
Trigger: TCTGAAATTCACTTCAGTCCAAGTCATACCTAGGAA...CTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCCAGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR CAA 90 bp GGGCCTGGGCCAGCAGGGGCCTCGAGGGCACAACGCCACTCTCCACGGGGCACCGTCCTGTGGGTCCCATaGAACACCACACACTGGCCT +
Preference number: 3 (lower is better)
Translates to: GPGPAGASRAQRHSPRGTVLWVP*NTTHWP
Trigger: AGGCCAGTGTGTGGTGTTCAATGGGACCCACAGGAC...GGTGCCCCGTGGAGAGTGGCGTTGTGCCCTCGAGGCCCCTGCTGGCCCAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
ENST00000452228.5
3UTR GCA 72 bp CGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCCCTaGTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCC +
Preference number: 3 (lower is better)
Translates to: RAPPWIPRPQGP*SPTFALQSPPP
Trigger: GGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGCAGGGCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR TCA 72 bp CAGCAGTGGCCGTGGGTGCAGGTGCTGAGCTCCGTCTaGGGCACTCGGCCAGTCGGGCTTGGGATGCAAGGG +
Preference number: 3 (lower is better)
Translates to: QQWPWVQVLSSV*GTRPVGLGMQG
Trigger: CCCTTGCATCCCAAGCCCGACTGGCCGAGTGCCTCAGACGGAGCTCAGCACCTGCACCCACGGCCACTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp GGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGCTCGGCCAGTCGGGCTaGGGATGCAAGGGCCAGCTC +
Preference number: 3 (lower is better)
Translates to: GPQGESGARAPPWIPRPQLGQSG*GCKGQL
Trigger: GAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGAG...CTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR GCA 72 bp CCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTaGCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGT +
Preference number: 3 (lower is better)
Translates to: PLPHAVGALQYR*LLGSPSLHGSG
Trigger: ACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR GCA 72 bp AGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCCTaGCACATGCAGTCGGAGCCCTGCAATACAGGTGCC +
Preference number: 3 (lower is better)
Translates to: RETSRPRRSRSP*HMQSEPCNTGA
Trigger: GGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR GCA 72 bp CAGGTCACAGAAAAAGGTGACCACGCCCAGCCAAGCTaGCCCGGTGCCCAGTGTGACGGCCGTGGGGATGAG +
Preference number: 3 (lower is better)
Translates to: QVTEKGDHAQPS*PGAQCDGRGDE
Trigger: CTCATCCCCACGGCCGTCACACTGGGCACCGGGGCAGCTTGGCTGGGCGTGGTCACCTTTTTCTGTGACCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR GCA 72 bp AGCTTCCTCTGGGCCCCAAGGAGAATCAGGTGCACGTaGCCCTCCTTGGATACCCAGGCCTCAGGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: SFLWAPRRIRCT*PSLDTQASGAL
Trigger: CAGGGCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCCAGAGGAAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 72 bp CCAGCAACGCCAGGTCCTCGAAGGTCCCTCCAGCCTTaGCCACGAGGTCCCCAATGCGGAACACGGGACAGT +
Preference number: 3 (lower is better)
Translates to: PATPGPRRSLQP*PRGPQCGTRDS
Trigger: ACTGTCCCGTGTTCCGCATTGGGGACCTCGTGGCCAAGGCTGGAGGGACCTTCGAGGACCTGGCGTTGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 72 bp GCTGAGCTCCGTCTGAGGCACTCGGCCAGTCGGGCTTaGGATGCAAGGGCCAGCTCCCTCCACACAGAGTTG +
Preference number: 3 (lower is better)
Translates to: AELRLRHSASRA*DARASSLHTEL
Trigger: CAACTCTGTGTGGAGGGAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGAGTGCCTCAGACGGAGCTCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp CCGGTGCCCAGTGTGACGGCCGTGGGGATGAGCCCGAACTTCCCTGCCTGCCCGACAGTAGGGGCTGAATaGTGGTTCATAGCGGCAGTG +
Preference number: 3 (lower is better)
Translates to: PVPSVTAVGMSPNFPACPTVGAE*WFIAAV
Trigger: CACTGCCGCTATGAACCACAATTCAGCCCCTACTGT...CGGGCAGGCAGGGAAGTTCGGGCTCATCCCCACGGCCGTCACACTGGGCACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp CTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCGGCCTCCACACCCGGTaGCTCCCACCAGTGAGTGGC +
Preference number: 3 (lower is better)
Translates to: LGSPSLHGSGSVAVSKHSGLHTR*LPPVSG
Trigger: GCCACTCACTGGTGGGAGCAACCGGGTGTGGAGGCC...GCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 72 bp CAGGTACCCACAGTGGAAAGCAGCCCCTTGCCTCCCTaGGGTGGACACTTAGAATTCCCTGCCCCGCCCTGG +
Preference number: 3 (lower is better)
Translates to: QVPTVESSPLPP*GGHLEFPAPPW
Trigger: CCAGGGCGGGGCAGGGAATTCTAAGTGTCCACCCCAGGGAGGCAAGGGGCTGCTTTCCACTGTGGGTACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp CCCTGGCCCTCCACAGCTTGCCCTGATCACCAGGTACCCACAGTGGAAAGCAGCAAGGTCCCTCCAGCCTaGGCCACGAGGTCCCCAATG +
Preference number: 3 (lower is better)
Translates to: PWPSTACPDHQVPTVESSKVPPA*ATRSPM
Trigger: CATTGGGGACCTCGTGGCCAAGGCTGGAGGGACCTT...GCTGCTTTCCACTGTGGGTACCTGGTGATCAGGGCAAGCTGTGGAGGGCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp CAGGGGCCCTGCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATAGTGGGTGTCAGAACTaGGACAGGGCCATCCTGGTG +
Preference number: 3 (lower is better)
Translates to: QGPCSPTFALQSPPPHGHSGCQN*DRAILV
Trigger: CACCAGGATGGCCCTGTCCAAGTTCTGACACCCACT...ATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGCAGGGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp GGAATGGGTTGGCAAGTGGGTGTCAGAACTTGGACAGGGCCATCCTGGTGTCTGGGCCTCCACACCCGGTaGCTCCCACCAGTGAGTGGC +
Preference number: 3 (lower is better)
Translates to: GMGWQVGVRTWTGPSWCLGLHTR*LPPVSG
Trigger: GCCACTCACTGGTGGGAGCAACCGGGTGTGGAGGCC...CAGACACCAGGATGGCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp CAAGTGGGTGTCAGAACTTGGACAGGGCCATCCTGGTGTCTGTGTCTGACTCCCCTCGGCCAGTCGGGCTaGGGATGCAAGGGCCAGCTC +
Preference number: 3 (lower is better)
Translates to: QVGVRTWTGPSWCLCLTPLGQSG*GCKGQL
Trigger: GAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGAG...GGGAGTCAGACACAGACACCAGGATGGCCCTGTCCAAGTTCTGACACCCACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR GCA 72 bp GACATCAGCTTCCTCTGGGCCCCAAGGAGAATCAGGTaGACGTGCCCCTCCTTGGATACCCAGGCCTCAGGG +
Preference number: 3 (lower is better)
Translates to: DISFLWAPRRIR*TCPSLDTQASG
Trigger: CCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCCAGAGGAAGCTGATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 72 bp CACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTaGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCG +
Preference number: 3 (lower is better)
Translates to: HMQSEPCNTGAC*ALPVSTGQVLS
Trigger: CGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 72 bp CCTCCACAGCTTGCCCTGATCACCAGGTACCCACAGTaGAAAGCAGCCCCTTGCCTCCCTGGGGTGGACACT +
Preference number: 3 (lower is better)
Translates to: PPQLALITRYPQ*KAAPCLPGVDT
Trigger: AGTGTCCACCCCAGGGAGGCAAGGGGCTGCTTTCCACTGTGGGTACCTGGTGATCAGGGCAAGCTGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 72 bp CTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATaGACATGGCTCTGGAGATTGAGAGGCAGCAGGGAC +
Preference number: 3 (lower is better)
Translates to: LSHLRPSEPTSP*TWLWRLRGSRD
Trigger: GTCCCTGCTGCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp AGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCTTCTACCTTGCCTTTTaGGCTCCAGCTGCACAGCCC +
Preference number: 3 (lower is better)
Translates to: SRSPAIQVPAGLSQSPRVFYLAF*APAAQP
Trigger: GGGCTGTGCAGCTGGAGCCAAAAAGGCAAGGTAGAA...GACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR CAA 90 bp GGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTTCAAGTCCTGTGGGTCCCATaGAACACCACACACTGGCCT +
Preference number: 3 (lower is better)
Translates to: GSTLPRWESGEGLSAGVQVLWVP*NTTHWP
Trigger: AGGCCAGTGTGTGGTGTTCAATGGGACCCACAGGAC...TTGAACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp CTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTGTTGCTTTCGGGGCCTaGGCCTCCTCATACTTTGTC +
Preference number: 3 (lower is better)
Translates to: LRQHPTKVGVRGGTVCWGVAFGA*ASSYFV
Trigger: GACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAAC...ACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp TTCCTCTGGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGGCTCCCGGAATGGGTaGGCAAGTGGGTGTCAGAAC +
Preference number: 3 (lower is better)
Translates to: FLWAPRRIRCTCPSLDTQGSRNG*ASGCQN
Trigger: GTTCTGACACCCACTTGCCAACCCATTCCGGGAGCC...CTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCCAGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR GCA 72 bp GGCCTGTTCCAGTTACCTTCTAGCCCACCTGGTAGCTaGAGGGCCTCAGTCTTCAGGGGTAGGGTCCCCAAG +
Preference number: 3 (lower is better)
Translates to: GLFQLPSSPPGS*RASVFRGRVPK
Trigger: CTTGGGGACCCTACCCCTGAAGACTGAGGCCCTGCAGCTACCAGGTGGGCTAGAAGGTAACTGGAACAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR CCA 72 bp CTTGGGATGCAAGGGCCAGCTCCCTCCACACAGAGTTaGCGGTTGCTTTCGGGGCCTTGGCCTCCTCATACT +
Preference number: 3 (lower is better)
Translates to: LGMQGPAPSTQS*RLLSGPWPPHT
Trigger: AGTATGAGGAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGTGGAGGGAGCTGGCCCTTGCATCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 72 bp ACCAGCAGGGAACGGCTACAGGCTCCCGGAATGGGTTaGCAAGTGGGTGTCAGAACTTGGACAGGGCCATCC +
Preference number: 3 (lower is better)
Translates to: TSRERLQAPGMG*QVGVRTWTGPS
Trigger: GGATGGCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCCGGGAGCCTGTAGCCGTTCCCTGCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 72 bp CAGGTGTGGGCCCAAGACACATGCTCCGCCCTTGCCTaGGGGATAGGGAGGTGGATTATCTGCCTACTCCAC +
Preference number: 3 (lower is better)
Translates to: QVWAQDTCSALA*GIGRWIICLLH
Trigger: GTGGAGTAGGCAGATAATCCACCTCCCTATCCCCCAGGCAAGGGCGGAGCATGTGTCTTGGGCCCACACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR CAA 90 bp TCCCTGCCCCGCCCTGGGACCAAGAGGAGAATTCCAGCTGCAAAACCTGGCCAGTTCTACCTTGCCTTTTaGGCTCCAGCTGCACAGCCC +
Preference number: 3 (lower is better)
Translates to: SLPRPGTKRRIPAAKPGQFYLAF*APAAQP
Trigger: GGGCTGTGCAGCTGGAGCCAAAAAGGCAAGGTAGAA...CTGGCCAGGTTTTGCAGCTGGAATTCTCCTCTTGGTCCCAGGGCGGGGCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR CAA 90 bp CTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCGTCCTGTGGGTCCCATaGAACACCACACACTGGCCT +
Preference number: 3 (lower is better)
Translates to: LRPSEPTSPWTWLWRLRGVLWVP*NTTHWP
Trigger: AGGCCAGTGTGTGGTGTTCAATGGGACCCACAGGAC...GCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp CCGGTGCCCAGTGTGACGGCCGTGGGGATGAGCCCGAACTTCCCTGCCTGCCCGTTGGACTTAGAGAAGTaGAACTTGCTGAAGGTGACT +
Preference number: 3 (lower is better)
Translates to: PVPSVTAVGMSPNFPACPLDLEK*NLLKVT
Trigger: AGTCACCTTCAGCAAGTTCAACTTCTCTAAGTCCAA...CGGGCAGGCAGGGAAGTTCGGGCTCATCCCCACGGCCGTCACACTGGGCACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp TGGGGTGGACACTTAGAATTCCCTGCCCCGCCCTGGGACCAAGAGGAGAATTCCGGCTCCCGGAATGGGTaGGCAAGTGGGTGTCAGAAC +
Preference number: 3 (lower is better)
Translates to: WGGHLEFPAPPWDQEENSGSRNG*ASGCQN
Trigger: GTTCTGACACCCACTTGCCAACCCATTCCGGGAGCC...GGAATTCTCCTCTTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGTCCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp GTGGCAGATCCAGGGAGCAGAGCTTGGGCCCCAAGGAGGCTGCCTAGAAAGGGCTCTCGGTGGTGTTGTTaGGAACCATTCCTTCCAGCC +
Preference number: 3 (lower is better)
Translates to: VADPGSRAWAPRRLPRKGSRWCC*EPFLPA
Trigger: GGCTGGAAGGAATGGTTCCAAACAACACCACCGAGA...GCCCTTTCTAGGCAGCCTCCTTGGGGCCCAAGCTCTGCTCCCTGGATCTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR TCA 72 bp AGTCCCCGGTGTCCAGGTCACAATCCCAGTGAACTCTaGTGCCTACAGAGCCACCCAGCAACGCCAGGTCCT +
Preference number: 3 (lower is better)
Translates to: SPRCPGHNPSEL*CLQSHPATPGP
Trigger: AGGACCTGGCGTTGCTGGGTGGCTCTGTAGGCATCAGAGTTCACTGGGATTGTGACCTGGACACCGGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR GCA 72 bp TGCAAGGGCCAGCTCCCTCCACACAGAGTTGGCGGTTaGTTTCGGGGCCTTGGCCTCCTCATACTTTGTCCT +
Preference number: 3 (lower is better)
Translates to: CKGQLPPHRVGG*FRGLGLLILCP
Trigger: AGGACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGTGGAGGGAGCTGGCCCTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 72 bp TCTCAACCAGCAGGGAACGGCTACAGGCTCCCGGAATaGGTTGGCAAGTGGGTGTCAGAACTTGGACAGGGC +
Preference number: 3 (lower is better)
Translates to: SQPAGNGYRLPE*VGKWVSELGQG
Trigger: GCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCCGGGAGCCTGTAGCCGTTCCCTGCTGGTTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 72 bp CCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTaGAACCATTCCTTCCAGCCACTCCATCCAGCCTGG +
Preference number: 3 (lower is better)
Translates to: PGQPEGDLGGVV*NHSFQPLHPAW
Trigger: CCAGGCTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 72 bp TCCGTGACTTTGTCCAGCCATGACATCAGCTTCCTCTaGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCC +
Preference number: 3 (lower is better)
Translates to: SVTLSSHDISFL*APRRIRCTCPS
Trigger: GGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCCAGAGGAAGCTGATGTCATGGCTGGACAAAGTCACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CCA 72 bp TGTGGCCTGCTGGCGTATCCACTGTGGCATTCTTTGTaGCACCAAGTCTTCACCTGCCCCAGGGAACCAGGC +
Preference number: 3 (lower is better)
Translates to: CGLLAYPLWHSL*HQVFTCPREPG
Trigger: GCCTGGTTCCCTGGGGCAGGTGAAGACTTGGTGCCACAAAGAATGCCACAGTGGATACGCCAGCAGGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR-3UTR CAA 90 bp CTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTTGGCCTCCTCATACTTaGTCCTCCAGTAGAAATGGG +
Preference number: 3 (lower is better)
Translates to: LRQHPTKVGVRGGTVCWGWPPHT*SSSRNG
Trigger: CCCATTTCTACTGGAGGACAAAGTATGAGGAGGCCA...ACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp GGAATGGGTTGGCAAGTGGGTGTCAGAACTTGGACAGGGCCATCCTGGTGTCTGGTCCTGTGGGTCCCATaGAACACCACACACTGGCCT +
Preference number: 3 (lower is better)
Translates to: GMGWQVGVRTWTGPSWCLVLWVP*NTTHWP
Trigger: AGGCCAGTGTGTGGTGTTCAATGGGACCCACAGGAC...CAGACACCAGGATGGCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp TGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGCAGGTCTCCAAGGCATaGGACTTAGAGAAGTTGAAC +
Preference number: 3 (lower is better)
Translates to: CSRSPAIQVPAGLSQSPRQVSKA*DLEKLN
Trigger: GTTCAACTTCTCTAAGTCCAATGCCTTGGAGACCTG...CCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp AAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCAAGGTCCCTCCAGCCTaGGCCACGAGGTCCCCAATG +
Preference number: 3 (lower is better)
Translates to: KPGQPEGDLGGVVWNHSFKVPPA*ATRSPM
Trigger: CATTGGGGACCTCGTGGCCAAGGCTGGAGGGACCTT...GAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp CTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCTCTCGGTGGTGTTGTTaGGAACCATTCCTTCCAGCC +
Preference number: 3 (lower is better)
Translates to: LRPSEPTSPWTWLWRLRGSRWCC*EPFLPA
Trigger: GGCTGGAAGGAATGGTTCCAAACAACACCACCGAGA...GCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR GCA 72 bp GAGTGTGGCCCTCATGCTCCTACATGGGTGCACAAGTaGCCAGGCCTGTTCCAGTTACCTTCTAGCCCACCT +
Preference number: 3 (lower is better)
Translates to: ECGPHAPTWVHK*PGLFQLPSSPP
Trigger: AGGTGGGCTAGAAGGTAACTGGAACAGGCCTGGGCACTTGTGCACCCATGTAGGAGCATGAGGGCCACACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR-3UTR CAA 90 bp AGGCCAGCAGCCAGAGTCCCCGGTGTCCAGGTCACAATCCCAGTGAACTCTGATACAGTAGGGGCTGAATaGTGGTTCATAGCGGCAGTG +
Preference number: 3 (lower is better)
Translates to: RPAARVPGVQVTIPVNSDTVGAE*WFIAAV
Trigger: CACTGCCGCTATGAACCACAATTCAGCCCCTACTGT...ATCAGAGTTCACTGGGATTGTGACCTGGACACCGGGGACTCTGGCTGCTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp CCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCAGCAGGCTTTACTCCGTGACTTaGTCCAGCCATGACATCAGC +
Preference number: 3 (lower is better)
Translates to: PSEPTSPWTWLWRLRGSRLYSVT*SSHDIS
Trigger: GCTGATGTCATGGCTGGACAAAGTCACGGAGTAAAG...CCTGCTGCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR GCA 72 bp GAACCCAATGATCACCAACTTAGCCCTGCCGCCCTCTaGTCTCTCTCCCAGACCTCCATGGCAAAAGGGCTA +
Preference number: 3 (lower is better)
Translates to: EPNDHQLSPAAL*SLSQTSMAKGL
Trigger: TAGCCCTTTTGCCATGGAGGTCTGGGAGAGAGAGCAGAGGGCGGCAGGGCTAAGTTGGTGATCATTGGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR CCA 72 bp TCACAGGTCCTGTGGGTCCCATTGAACACCACACACTaGCCTGTTTTTACACCGTGGCTGTGTGTGCCTCCC +
Preference number: 3 (lower is better)
Translates to: SQVLWVPLNTTH*PVFTPWLCVPP
Trigger: GGGAGGCACACACAGCCACGGTGTAAAAACAGGCCAGTGTGTGGTGTTCAATGGGACCCACAGGACCTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432930.5
3UTR-3UTR CAA 90 bp TGCTGGCTTTACTCCGTGACTTTGTCCAGCCATGACATCAGCTTCCTCTGGGCCTTCTACCTTGCCTTTTaGGCTCCAGCTGCACAGCCC +
Preference number: 3 (lower is better)
Translates to: CWLYSVTLSSHDISFLWAFYLAF*APAAQP
Trigger: GGGCTGTGCAGCTGGAGCCAAAAAGGCAAGGTAGAA...GGCCCAGAGGAAGCTGATGTCATGGCTGGACAAAGTCACGGAGTAAAGCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR CAA 90 bp GAGGCAGCAGGGACCCCAGGCATTTTACTGAGGCTCCAGGTGGCAGGTGATTCTACTCCTCTTTCTACCTaGCCTTTTTGGCTCCAGCTG +
Preference number: 3 (lower is better)
Translates to: EAAGTPGILLRLQVAGDSTPLST*PFWLQL
Trigger: CAGCTGGAGCCAAAAAGGCAAGGTAGAAAGAGGAGT...AGAATCACCTGCCACCTGGAGCCTCAGTAAAATGCCTGGGGTCCCTGCTGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR CAA 90 bp GCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGTTGGACTTAGAGAAGTaGAACTTGCTGAAGGTGACT +
Preference number: 3 (lower is better)
Translates to: ALPPSPFRAHLPMDMALELDLEK*NLLKVT
Trigger: AGTCACCTTCAGCAAGTTCAACTTCTCTAAGTCCAA...CTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp AGTGAGGCCAGCAGCCAGAGTCCCCGGTGTCCAGGTCACAATCCCAGTGAACTCCAGGTCTCCAAGGCATaGGACTTAGAGAAGTTGAAC +
Preference number: 3 (lower is better)
Translates to: SEASSQSPRCPGHNPSELQVSKA*DLEKLN
Trigger: GTTCAACTTCTCTAAGTCCAATGCCTTGGAGACCTG...GAGTTCACTGGGATTGTGACCTGGACACCGGGGACTCTGGCTGCTGGCCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp GGTCCTGAAGAACCCAATGATCACCAACTTAGCCCTGCCGCCCTCTGCTCTCTCACTCCTCTTTCTACCTaGCCTTTTTGGCTCCAGCTG +
Preference number: 3 (lower is better)
Translates to: GPEEPNDHQLSPAALCSLTPLST*PFWLQL
Trigger: CAGCTGGAGCCAAAAAGGCAAGGTAGAAAGAGGAGT...GAGAGAGCAGAGGGCGGCAGGGCTAAGTTGGTGATCATTGGGTTCTTCAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR-3UTR CAA 90 bp GGAATGGGTTGGCAAGTGGGTGTCAGAACTTGGACAGGGCCATCCTGGTGTCTGTGGCCTCCTCATACTTaGTCCTCCAGTAGAAATGGG +
Preference number: 3 (lower is better)
Translates to: GMGWQVGVRTWTGPSWCLWPPHT*SSSRNG
Trigger: CCCATTTCTACTGGAGGACAAAGTATGAGGAGGCCA...CAGACACCAGGATGGCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR GCA 72 bp TTCAAGGGCTTTGAGGTGAAAAGAGTGTGGCCCTCATaGTCCTACATGGGTGCACAAGTGCCCAGGCCTGTT +
Preference number: 3 (lower is better)
Translates to: FKGFEVKRVWPS*SYMGAQVPRPV
Trigger: AACAGGCCTGGGCACTTGTGCACCCATGTAGGAGCATGAGGGCCACACTCTTTTCACCTCAAAGCCCTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR GCA 72 bp CCACTGTGGCATTCTTTGTGGCACCAAGTCTTCACCTaGCCCAGGGAACCAGGCAATTGTCTCCAATCCACA +
Preference number: 3 (lower is better)
Translates to: PLWHSLWHQVFT*PREPGNCLQST
Trigger: TGTGGATTGGAGACAATTGCCTGGTTCCCTGGGGCAGGTGAAGACTTGGTGCCACAAAGAATGCCACAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR CCA 72 bp CTCTCTCCCAGACCTCCATGGCAAAAGGGCTACCACTaGAAAGCAGCCGGTCCTCATAAACTAAGCAGGTGT +
Preference number: 3 (lower is better)
Translates to: LSPRPPWQKGYH*KAAGPHKLSRC
Trigger: ACACCTGCTTAGTTTATGAGGACCGGCTGCTTTCCAGTGGTAGCCCTTTTGCCATGGAGGTCTGGGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR CCA 72 bp TCACAGGTCCTGTGGGTCCCATTGAACACCACACACTaGCCTGTTTTTACACCTCTGGGCATCTGCCCTGAA +
Preference number: 3 (lower is better)
Translates to: SQVLWVPLNTTH*PVFTPLGICPE
Trigger: TTCAGGGCAGATGCCCAGAGGTGTAAAAACAGGCCAGTGTGTGGTGTTCAATGGGACCCACAGGACCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452228.5
3UTR-3UTR CAA 90 bp CTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCTTGGACTTAGAGAAGTaGAACTTGCTGAAGGTGACT +
Preference number: 3 (lower is better)
Translates to: LRPSEPTSPWTWLWRLRGLDLEK*NLLKVT
Trigger: AGTCACCTTCAGCAAGTTCAACTTCTCTAAGTCCAA...GCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp TCCCTCCACACAGAGTTGGCGGTTGCTTTCGGGGCCTTGGCCTCCTCATACTTTCAGGTCTCCAAGGCATaGGACTTAGAGAAGTTGAAC +
Preference number: 3 (lower is better)
Translates to: SLHTELAVAFGALASSYFQVSKA*DLEKLN
Trigger: GTTCAACTTCTCTAAGTCCAATGCCTTGGAGACCTG...AAAGTATGAGGAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGTGGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR TCA 72 bp CAAGAGGAGAATTCCAGCTGCAAAACCTGGCCAGCCTaGGGGAGATCTCGGTGGTGTTGTTTGGAACCATTC +
Preference number: 3 (lower is better)
Translates to: QEENSSCKTWPA*GRSRWCCLEPF
Trigger: GAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTTGCAGCTGGAATTCTCCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR GCA 72 bp CATGCCTGTAAGGACTACACAGGAAGAGGGTGGCTTTaGTGGCTTTACTCCGTGACTTTGTCCAGCCATGAC +
Preference number: 3 (lower is better)
Translates to: HACKDYTGRGWL*WLYSVTLSSHD
Trigger: GTCATGGCTGGACAAAGTCACGGAGTAAAGCCAGCAAAGCCACCCTCTTCCTGTGTAGTCCTTACAGGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR CCA 72 bp TCCAGTCATGCCTGTAAGGACTACACAGGAAGAGGGTaGCTTTGCTGGCTTTACTCCGTGACTTTGTCCAGC +
Preference number: 3 (lower is better)
Translates to: SSHACKDYTGRG*LCWLYSVTLSS
Trigger: GCTGGACAAAGTCACGGAGTAAAGCCAGCAAAGCCACCCTCTTCCTGTGTAGTCCTTACAGGCATGACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR-3UTR CAA 90 bp CTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCTTAGAGAAGTTGAACTaGCTGAAGGTGACTGTGTTT +
Preference number: 3 (lower is better)
Translates to: LRPSEPTSPWTWLWRLRGLEKLN*LKVTVF
Trigger: AAACACAGTCACCTTCAGCAAGTTCAACTTCTCTAA...GCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR-3UTR CAA 90 bp AGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGGAGATCTCGGTGGTGTaGTTTGGAACCATTCCTTCC +
Preference number: 3 (lower is better)
Translates to: REISVVLFGTIPSSHSIQEISVV*FGTIPS
Trigger: GGAAGGAATGGTTCCAAACAACACCACCGAGATCTC...CTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR TCA 72 bp CAGCTGCCCAGACAGCTTCCTAGGTATGACTTGGACTaGAGTGAATTTCAGATGTACAGCCTCCCACAGCCT +
Preference number: 3 (lower is better)
Translates to: QLPRQLPRYDLD*SEFQMYSLPQP
Trigger: AGGCTGTGGGAGGCTGTACATCTGAAATTCACTTCAGTCCAAGTCATACCTAGGAAGCTGTCTGGGCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR CCA 72 bp TCGAGCAGCTGCCCAGACAGCTTCCTAGGTATGACTTaGACTGAAGTGAATTTCAGATGTACAGCCTCCCAC +
Preference number: 3 (lower is better)
Translates to: SSSCPDSFLGMT*TEVNFRCTASH
Trigger: GTGGGAGGCTGTACATCTGAAATTCACTTCAGTCCAAGTCATACCTAGGAAGCTGTCTGGGCAGCTGCTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
3UTR GCA 72 bp ATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTaGTGGCGTATCCACTGTGGCATTCTTTGTGGCACC +
Preference number: 3 (lower is better)
Translates to: IHNNNCLASHVA*WRIHCGILCGT
Trigger: GGTGCCACAAAGAATGCCACAGTGGATACGCCAGCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR CCA 72 bp CATAATAATAATTGCTTGGCCAGCCATGTGGCCTGCTaGCGTATCCACTGTGGCATTCTTTGTGGCACCAAG +
Preference number: 3 (lower is better)
Translates to: HNNNCLASHVAC*RIHCGILCGTK
Trigger: CTTGGTGCCACAAAGAATGCCACAGTGGATACGCCAGCAGGCCACATGGCTGGCCAAGCAATTATTATTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR CCA 72 bp AAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTaGCCTGCTGGCGTATCCACTGTGGCATTCTTTGTG +
Preference number: 3 (lower is better)
Translates to: KGSIIIIAWPAM*PAGVSTVAFFV
Trigger: CACAAAGAATGCCACAGTGGATACGCCAGCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
3UTR-3UTR CAA 90 bp CCATGGCAAAAGGGCTACCACTGGAAAGCAGCCGGTCCTCATAAACTAAGCAGGTTAGAGAAGTTGAACTaGCTGAAGGTGACTGTGTTT +
Preference number: 3 (lower is better)
Translates to: PWQKGYHWKAAGPHKLSRLEKLN*LKVTVF
Trigger: AAACACAGTCACCTTCAGCAAGTTCAACTTCTCTAA...CCTGCTTAGTTTATGAGGACCGGCTGCTTTCCAGTGGTAGCCCTTTTGCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442475.5
CDS-3UTR TCA 90 bp GGTGCCCAGTGTGACGGCCGTGGGGATGAGCCCGAACTTCCCTGCCTGCCCGGTGTGCTGAGCTCCGTCTaGGGCACTCGGCCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: GAQCDGRGDEPELPCLPGVLSSV*GTRPVG
Trigger: CCCGACTGGCCGAGTGCCTCAGACGGAGCTCAGCAC...ACCGGGCAGGCAGGGAAGTTCGGGCTCATCCCCACGGCCGTCACACTGGGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp CTGGGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCCTGGGGCCTCATCCTTaGGATCCCCAGGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LGTEHWERDLQAQTQQEPLGPHP*DPQAGP
Trigger: GGGCCCTGCCTGGGGATCTCAAGGATGAGGCCCCAG...GGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CCCAGTGTGACGGCCGTGGGGATGAGCCCGAACTTCCCTGCCTGCCCGGTGACGAGGCCTCAGGGGCCCTaGTCTCCCACCTTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: PSVTAVGMSPNFPACPVTRPQGP*SPTFAL
Trigger: AAGGGCGAAGGTGGGAGAGCAGGGCCCCTGAGGCCT...CGTCACCGGGCAGGCAGGGAAGTTCGGGCTCATCCCCACGGCCGTCACACTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp GAAGTTCTGGGCCTGGGCCAGCAGGGGCCTCGAGGGCACAACGCCACTCTCCACTCCCTGCCTGCCCGGTaGCGAGGATGTCGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: EVLGLGQQGPRGHNATLHSLPAR*RGCRSG
Trigger: TCCGCTTCGACATCCTCGTCACCGGGCAGGCAGGGA...GTGGAGAGTGGCGTTGTGCCCTCGAGGCCCCTGCTGGCCCAGGCCCAGAACTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCCACGCCCAGCCAAGCTaGCCCGGTGCCCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: GAPATCSRSPAIQVPAGLHAQPS*PGAQCD
Trigger: GTCACACTGGGCACCGGGGCAGCTTGGCTGGGCGTG...GAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CCGGTGCCCAGTGTGACGGCCGTGGGGATGAGCCCGAACTTCCCTGCCTGCCCGCACAGAGTTGGCGGTTaGTTTCGGGGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PVPSVTAVGMSPNFPACPHRVGG*FRGLGL
Trigger: GAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTG...CGGGCAGGCAGGGAAGTTCGGGCTCATCCCCACGGCCGTCACACTGGGCACCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GGGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCCTTCGGCCAGTCGGGCTTaGGATGCAAGGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GDRALGERPPGPDAAGAPSASRA*DARASS
Trigger: GGAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGA...AGGGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GAAGTTCTGGGCCTGGGCCAGCAGGGGCCTCGAGGGCACAACGCCACTCTCCACTCGGCCAGTCGGGCTTaGGATGCAAGGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EVLGLGQQGPRGHNATLHSASRA*DARASS
Trigger: GGAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGA...GTGGAGAGTGGCGTTGTGCCCTCGAGGCCCCTGCTGGCCCAGGCCCAGAACTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp TACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCGTGCTGAGCTCCGTCTaGGGCACTCGGCCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: YRCLLGSPSLHGSGSVAVVLSSV*GTRPVG
Trigger: CCCGACTGGCCGAGTGCCTCAGACGGAGCTCAGCAC...GACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp GCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGCTGGGGCCTCATCCTTaGGATCCCCAGGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: ALPPSPFRAHLPMDMALELGPHP*DPQAGP
Trigger: GGGCCCTGCCTGGGGATCTCAAGGATGAGGCCCCAG...CTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp TCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGCTGGGGCCTCATCCTTaGGATCCCCAGGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SEPCNTGACWALPVSTGQLGPHP*DPQAGP
Trigger: GGGCCCTGCCTGGGGATCTCAAGGATGAGGCCCCAG...CTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp CCCTTGCCTCCCTGGGGTGGACACTTAGAATTCCCTGCCCCGCCCTGGGACCAACTGGGGCCTCATCCTTaGGATCCCCAGGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PLPPWGGHLEFPAPPWDQLGPHP*DPQAGP
Trigger: GGGCCCTGCCTGGGGATCTCAAGGATGAGGCCCCAG...TTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGTCCACCCCAGGGAGGCAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GCCCAGTGTGACGGCCGTGGGGATGAGCCCGAACTTCCCTGCCTGCCCGGTGACGGAGCCCCTGCCACATaGAGTCGGAGCCCTGCAATA +
Preference number: 4 (lower is better)
Translates to: AQCDGRGDEPELPCLPGDGAPAT*SRSPAI
Trigger: TATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCC...GTCACCGGGCAGGCAGGGAAGTTCGGGCTCATCCCCACGGCCGTCACACTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCACGCAGCAGGAGCCCCTaGCACATGCAGTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: VGALQYRCLLGSPSLHGSRSRSP*HMQSEP
Trigger: GGGCTCCGACTGCATGTGGCAGGGGCTCCTGCTGCG...TGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCCTGCCCCCACGGGGACACATaGATCCCTGCAGGCACTACC +
Preference number: 4 (lower is better)
Translates to: GQSTGRETSRPRRSRSPCPHGDT*IPAGTT
Trigger: GGTAGTGCCTGCAGGGATGCATGTGTCCCCGTGGGG...GCAGGGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp CCGGTGCCCAGTGTGACGGCCGTGGGGATGAGCCCGAACTTCCCTGCCTGCCCGGAGCCCACCTCCCCATaGACATGGCTCTGGAGATTG +
Preference number: 4 (lower is better)
Translates to: PVPSVTAVGMSPNFPACPEPTSP*TWLWRL
Trigger: CAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTC...CGGGCAGGCAGGGAAGTTCGGGCTCATCCCCACGGCCGTCACACTGGGCACCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CTGGGCCAGCAGGGGCCTCGAGGGCACAACGCCACTCTCCACGGGGCACCAACTTGGGCTCGTGTTGACTaGAAAGGCCGGAAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: LGQQGPRGHNATLHGAPTWARVD*KGRKPA
Trigger: TGCCGGCTTCCGGCCTTTCCAGTCAACACGAGCCCA...AGTTGGTGCCCCGTGGAGAGTGGCGTTGTGCCCTCGAGGCCCCTGCTGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452228.5
3UTR CAA 72 bp CCCAGCAACGCCAGGTCCTCGAAGGTCCCTCCAGCCTaGGCCACGAGGTCCCCAATGCGGAACACGGGACAG +
Preference number: 4 (lower is better)
Translates to: PSNARSSKVPPA*ATRSPMRNTGQ
Trigger: CTGTCCCGTGTTCCGCATTGGGGACCTCGTGGCCAAGGCTGGAGGGACCTTCGAGGACCTGGCGTTGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp CCCAGTGTGACGGCCGTGGGGATGAGCCCGAACTTCCCTGCCTGCCCGGTGACGGGTTGCTCCCACCAGTaGGTGGCTGTCCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PSVTAVGMSPNFPACPVTGCSHQ*VAVLKL
Trigger: CAACTTCAGGACAGCCACTCACTGGTGGGAGCAACC...CGTCACCGGGCAGGCAGGGAAGTTCGGGCTCATCCCCACGGCCGTCACACTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp CCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCTCCCTGCCTGCCCGGTaGCGAGGATGTCGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: PKENQVHVPLLGYPGLRGSLPAR*RGCRSG
Trigger: TCCGCTTCGACATCCTCGTCACCGGGCAGGCAGGGA...GCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp TCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGTCCCTGCCTGCCCGGTaGCGAGGATGTCGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: SEPCNTGACWALPVSTGQSLPAR*RGCRSG
Trigger: TCCGCTTCGACATCCTCGTCACCGGGCAGGCAGGGA...CTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp GCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTGCTGAGCTCCGTCTaGGGCACTCGGCCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: ALQYRCLLGSPSLHGSGSVLSSV*GTRPVG
Trigger: CCCGACTGGCCGAGTGCCTCAGACGGAGCTCAGCAC...AGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp CCTGCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGCGTGGGTGCAGGTGCTaGGCTCCGTCTGAGGCACTC +
Preference number: 4 (lower is better)
Translates to: PALPPSPFRAHLPMDMALRGCRC*APSEAL
Trigger: GAGTGCCTCAGACGGAGCTCAGCACCTGCACCCACG...CAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp GGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCCTGTGGGGTCTCTACCTATaGTGGGGGTGCAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: GTEHWERDLQAQTQQEPLWGLYL*WGCRWG
Trigger: CCCCCATCTGCACCCCCATCATAGGTAGAGACCCCA...CAGGGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000442475.5
CDS-3UTR TCA 90 bp GGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCCTGCTAGCTGCGGGCACATaGGTCAGCATGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GTEHWERDLQAQTQQEPLLAAGT*VSMAAA
Trigger: TGCAGCTGCCATGCTGACTCATGTGCCCGCAGCTAG...CAGGGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR GCA 90 bp AGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCCTGGGGAGCCCATGCTaGCAGCTCCTGCTAGCTGCG +
Preference number: 4 (lower is better)
Translates to: SRSPAIQVPAGLSQSPRVLGSPC*QLLLAA
Trigger: CGCAGCTAGCAGGAGCTGGCAGCATGGGCTCCCCAG...GACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000442475.5
CDS-3UTR GCA 90 bp GCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGCTGGGGAGCCCATGCTaGCAGCTCCTGCTAGCTGCG +
Preference number: 4 (lower is better)
Translates to: ALPPSPFRAHLPMDMALELGSPC*QLLLAA
Trigger: CGCAGCTAGCAGGAGCTGGCAGCATGGGCTCCCCAG...CTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR GCA 90 bp TATGGCTCCCTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCCACGCCCAGCCAAGCTaGCCCGGTGCCCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: YGSLRQHPTKVGVRGGTVHAQPS*PGAQCD
Trigger: GTCACACTGGGCACCGGGGCAGCTTGGCTGGGCGTG...GACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAGGGAGCCATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp TCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCCCTGCTCTCCCCACAGAGTTGGCGGTTaGTTTCGGGGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SGARAPPWIPRPQGPCSPHRVGG*FRGLGL
Trigger: GAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTG...GGGAGAGCAGGGCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp TACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTGGGCCCAAGACACATaGTCCGCCCTTGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: YRCLLGSPSLHGSGSVAVWAQDT*SALAWG
Trigger: CCCCCAGGCAAGGGCGGAGCATGTGTCTTGGGCCCA...GACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR GCA 90 bp GGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGAGGCCTCAGGGGCCCTaGTCTCCCACCTTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: GPQGESGARAPPWIPRPQRPQGP*SPTFAL
Trigger: AAGGGCGAAGGTGGGAGAGCAGGGCCCCTGAGGCCT...CTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCGCCAGCCATGTGGCCTaGTGGCGTATCCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: GAPATCSRSPAIQVPAGLASHVA*WRIHCG
Trigger: GCCACAGTGGATACGCCAGCAGGCCACATGGCTGGC...GAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp CTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTTCGGCCAGTCGGGCTTaGGATGCAAGGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LRQHPTKVGVRGGTVCWGSASRA*DARASS
Trigger: GGAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGA...ACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCTCGGCCAGTCGGGCTTaGGATGCAAGGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PKENQVHVPLLGYPGLRGSASRA*DARASS
Trigger: GGAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGA...GCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAACAGCAGCAGTGGCCGTaGGTGCAGGTGCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GACWALPVSTGQVLSPSQQQQWP*VQVLSS
Trigger: GGAGCTCAGCACCTGCACCCACGGCCACTGCTGCTG...TTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CCTACAGAGCCACCCAGCAACGCCAGGTCCTCGAAGGTCCCTCCAGCCTTGGCCCTGGGGACAGAGCACTaGGAGAGAGACCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PTEPPSNARSSKVPPALALGTEH*ERDLQA
Trigger: GGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCCAG...GGCCAAGGCTGGAGGGACCTTCGAGGACCTGGCGTTGCTGGGTGGCTCTGTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp ACTGGGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCTCCAAGGGGTTGGGCTaGGGGGTTACCGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: TGDRALGERPPGPDAAGASKGLG*GVTEEG
Trigger: TCCCTCCTCGGTAACCCCCCAGCCCAACCCCTTGGA...GGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CCA 90 bp GGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCAAGGGGTTGGGCTaGGGGGTTACCGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GAPATCSRSPAIQVPAGLSKGLG*GVTEEG
Trigger: TCCCTCCTCGGTAACCCCCCAGCCCAACCCCTTGGA...GAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CCA 90 bp GAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCCCTGCTGCACGTGCCCCTCCTTaGATACCCAGGCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: ENQVHVPLLGYPGLRGPAARAPP*IPRPQG
Trigger: CCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGC...AGCAGGGCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CCTGCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGCACGTGCCCCTCCTTaGATACCCAGGCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: PALPPSPFRAHLPMDMALARAPP*IPRPQG
Trigger: CCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGC...CAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp ACTGGGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCTGCAGGCACTACCCTaGGGTGCATGCCTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: TGDRALGERPPGPDAAGALQALP*GACLCA
Trigger: TGCGCACAGGCATGCACCCCAGGGTAGTGCCTGCAG...GGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp CTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCACCTGAGGCCTGCCTaGCACAGGCACCCCCACGGG +
Preference number: 4 (lower is better)
Translates to: LGSPSLHGSGSVAVSKHSHLRPA*HRHPHG
Trigger: CCCGTGGGGGTGCCTGTGCCAGGCAGGCCTCAGGTG...GCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR TCA 90 bp TATGGCTCCCTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTCCCTGCCTGCCCGGTaGCGAGGATGTCGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: YGSLRQHPTKVGVRGGTVSLPAR*RGCRSG
Trigger: TCCGCTTCGACATCCTCGTCACCGGGCAGGCAGGGA...GACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAGGGAGCCATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp TCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATGTGCTGAGCTCCGTCTaGGGCACTCGGCCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: SPTFALQSPPPHGHGSGDVLSSV*GTRPVG
Trigger: CCCGACTGGCCGAGTGCCTCAGACGGAGCTCAGCAC...ATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp CACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCCGTGGGTGCAGGTGCTaGGCTCCGTCTGAGGCACTC +
Preference number: 4 (lower is better)
Translates to: HMQSEPCNTGACWALPVSRGCRC*APSEAL
Trigger: GAGTGCCTCAGACGGAGCTCAGCACCTGCACCCACG...GGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCAGCAGGCACCGTGGCTGTGTGTaGCTCCCTCCCCTTCGGGGC +
Preference number: 4 (lower is better)
Translates to: PSEPTSPWTWLWRLRGSRHRGCV*LPPLRG
Trigger: GCCCCGAAGGGGAGGGAGGCACACACAGCCACGGTG...CCTGCTGCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000432930.5
CDS-3UTR GCA 90 bp ACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACACGCCCAGCCAAGCTaGCCCGGTGCCCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: TCSRSPAIQVPAGLSQSPHAQPS*PGAQCD
Trigger: GTCACACTGGGCACCGGGGCAGCTTGGCTGGGCGTG...TGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CTGGGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCTGCAATACAGGTGCCTaGTGGGCTCTCCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: LGTEHWERDLQAQTQQEPCNTGA*WALPVS
Trigger: GGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCA...GGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp TGTGAAGTTCTGGGCCTGGGCCAGCAGGGGCCTCGAGGGCACAACGCCACTCTCGCCCTGCAATACAGGTaGCTGCTGGGCTCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: CEVLGLGQQGPRGHNATLALQYR*LLGSPS
Trigger: ACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGC...GAGAGTGGCGTTGTGCCCTCGAGGCCCCTGCTGGCCCAGGCCCAGAACTTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CCCTCCACAGCTTGCCCTGATCACCAGGTACCCACAGTGGAAAGCAGCCCCTTGCGCAGCAGGAGCCCCTaGCACATGCAGTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PSTACPDHQVPTVESSPLRSRSP*HMQSEP
Trigger: GGGCTCCGACTGCATGTGGCAGGGGCTCCTGCTGCG...CAAGGGGCTGCTTTCCACTGTGGGTACCTGGTGATCAGGGCAAGCTGTGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTCACATGCTCCGCCCTTaGCTGGGGGATAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LRQHPTKVGVRGGTVCWGHMLRP*LGDREV
Trigger: CACCTCCCTATCCCCCAGGCAAGGGCGGAGCATGTG...ACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR GCA 90 bp TGGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCATGGGCCCAAGACACATaGTCCGCCCTTGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: WAPRRIRCTCPSLDTQASWAQDT*SALAWG
Trigger: CCCCCAGGCAAGGGCGGAGCATGTGTCTTGGGCCCA...TGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR GCA 90 bp CAGGGGCCCTGCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATTGGCCCTCCACAGCTTaGCCTGATCACCAGGTACCC +
Preference number: 4 (lower is better)
Translates to: QGPCSPTFALQSPPPHGHWPSTA*PDHQVP
Trigger: GGGTACCTGGTGATCAGGGCAAGCTGTGGAGGGCCA...ATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGCAGGGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCCCCTCCCTCGAGCAGCTaGCCAGACAGCTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PRRIRCTCPSLDTQASGAPPSSS*PDSFLC
Trigger: GCAGAGGAAGCTGTCTGGGCAGCTGCTCGAGGGAGG...GGCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422210.5
ENST00000432930.5
CDS-3UTR CCA 90 bp CCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGCCAGCAGTTAGCCAGTaGGACGGACGGGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PATCSRSPAIQVPAGLSQPAVSQ*DGRVLW
Trigger: CCAGAGCACCCGTCCGTCCCACTGGCTAACTGCTGG...CTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000432930.5
CDS-3UTR CCA 90 bp CCTACAGAGCCACCCAGCAACGCCAGGTCCTCGAAGGTCCCTCCAGCCTTGGCCCCCTCCACACAGAGTTaGCGGTTGCTTTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PTEPPSNARSSKVPPALAPSTQS*RLLSGP
Trigger: AGGCCCCGAAAGCAACCGCCAACTCTGTGTGGAGGG...GGCCAAGGCTGGAGGGACCTTCGAGGACCTGGCGTTGCTGGGTGGCTCTGTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CTGGGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCTGGACAGGGCCATCCTaGTGTCTGTGTCTGACTCCC +
Preference number: 4 (lower is better)
Translates to: LGTEHWERDLQAQTQQEPWTGPS*CLCLTP
Trigger: GGGAGTCAGACACAGACACCAGGATGGCCCTGTCCA...GGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CTGGGCCAGCAGGGGCCTCGAGGGCACAACGCCACTCTCCACGGGGCACCAACTCCCAATCCTCCATGCTaGGGCCTCATCCTTGAGATC +
Preference number: 4 (lower is better)
Translates to: LGQQGPRGHNATLHGAPTPNPPC*GLILEI
Trigger: GATCTCAAGGATGAGGCCCCAGCATGGAGGATTGGG...AGTTGGTGCCCCGTGGAGAGTGGCGTTGTGCCCTCGAGGCCCCTGCTGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GTGCCCAGTGTGACGGCCGTGGGGATGAGCCCGAACTTCCCTGCCTGCCCGGTGGGAGGGACTGTCTGCTaGGGTTCAAGGGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: VPSVTAVGMSPNFPACPVGGTVC*GSRVEF
Trigger: GAATTCCACCCTTGAACCCCAGCAGACAGTCCCTCC...CACCGGGCAGGCAGGGAAGTTCGGGCTCATCCCCACGGCCGTCACACTGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CTGAGGCACTCGGCCAGTCGGGCTTGGGATGCAAGGGCCAGCTCCCTCCACACACACAGCCGACTTCTATaGCTCCCTGAGGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: LRHSASRAWDARASSLHTHSRLL*LPEAAP
Trigger: GGGTGCTGCCTCAGGGAGCCATAGAAGTCGGCTGTG...TGTGTGGAGGGAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGAGTGCCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CCCTTGCCTCCCTGGGGTGGACACTTAGAATTCCCTGCCCCGCCCTGGGACCAACTGGGGACAGAGCACTaGGAGAGAGACCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PLPPWGGHLEFPAPPWDQLGTEH*ERDLQA
Trigger: GGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCCAG...TTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGTCCACCCCAGGGAGGCAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCCTGGGGACAGAGCACTaGGAGAGAGACCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: YRCLLGSPSLHGSGSVAVLGTEH*ERDLQA
Trigger: GGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCCAG...GACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GTGCCCAGTGTGACGGCCGTGGGGATGAGCCCGAACTTCCCTGCCTGCCCGGTGTCTCCCAGACCTCCATaGCAAAAGGGCTACCACTGG +
Preference number: 4 (lower is better)
Translates to: VPSVTAVGMSPNFPACPVSPRPP*QKGYHW
Trigger: CCAGTGGTAGCCCTTTTGCCATGGAGGTCTGGGAGA...CACCGGGCAGGCAGGGAAGTTCGGGCTCATCCCCACGGCCGTCACACTGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442475.5
CDS-3UTR CCA 90 bp AGCAACGCCAGGTCCTCGAAGGTCCCTCCAGCCTTGGCCACGAGGTCCCCAATGCCACTCCATCCAGCCTaGGATCAGAGCCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SNARSSKVPPALATRSPMPLHPA*DQSQGL
Trigger: GAGGCCCTGGCTCTGATCCCAGGCTGGATGGAGTGG...CATTGGGGACCTCGTGGCCAAGGCTGGAGGGACCTTCGAGGACCTGGCGTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAACCACTCCATCCAGCCTaGGATCAGAGCCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GACWALPVSTGQVLSPSQPLHPA*DQSQGL
Trigger: GAGGCCCTGGCTCTGATCCCAGGCTGGATGGAGTGG...TTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTTCCCTGCCCCGCCCTaGGACCAAGAGGAGAATTCC +
Preference number: 4 (lower is better)
Translates to: GAPATCSRSPAIQVPAGLFPAPP*DQEENS
Trigger: GGAATTCTCCTCTTGGTCCCAGGGCGGGGCAGGGAA...GAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GGGGCCTCGAGGGCACAACGCCACTCTCCACGGGGCACCAACTCCAGATCTCACTTCCCTGCCCCGCCCTaGGACCAAGAGGAGAATTCC +
Preference number: 4 (lower is better)
Translates to: GASRAQRHSPRGTNSRSHFPAPP*DQEENS
Trigger: GGAATTCTCCTCTTGGTCCCAGGGCGGGGCAGGGAA...GTGAGATCTGGAGTTGGTGCCCCGTGGAGAGTGGCGTTGTGCCCTCGAGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCCCTGCTCTCCCACCAGGTACCCACAGTaGAAAGCAGCCCCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: SGARAPPWIPRPQGPCSPTRYPQ*KAAPCL
Trigger: GAGGCAAGGGGCTGCTTTCCACTGTGGGTACCTGGT...GGGAGAGCAGGGCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp CCTACAGAGCCACCCAGCAACGCCAGGTCCTCGAAGGTCCCTCCAGCCTTGGCCGGTTGCTCCCACCAGTaGGTGGCTGTCCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PTEPPSNARSSKVPPALAGCSHQ*VAVLKL
Trigger: CAACTTCAGGACAGCCACTCACTGGTGGGAGCAACC...GGCCAAGGCTGGAGGGACCTTCGAGGACCTGGCGTTGCTGGGTGGCTCTGTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp CAGCAGGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGTGGGGTCTCTACCTATaGTGGGGGTGCAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: QQEPLPHAVGALQYRCLLWGLYL*WGCRWG
Trigger: CCCCCATCTGCACCCCCATCATAGGTAGAGACCCCA...CAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCCTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000442475.5
CDS-3UTR TCA 90 bp GGGGCCTCGAGGGCACAACGCCACTCTCCACGGGGCACCAACTCCAGATCTCACAAAACCTGGCCAGCCTaGGGGAGATCTCGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GASRAQRHSPRGTNSRSHKTWPA*GRSRWC
Trigger: ACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTT...GTGAGATCTGGAGTTGGTGCCCCGTGGAGAGTGGCGTTGTGCCCTCGAGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGCCACGAGGTCCCCAATaGGGAACACGGGACAGTAGG +
Preference number: 4 (lower is better)
Translates to: GPQGESGARAPPWIPRPQPRGPQ*GTRDSR
Trigger: CCTACTGTCCCGTGTTCCGCATTGGGGACCTCGTGG...CTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CAGGGGCCCTGCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATTGCAATACAGGTGCCTaGTGGGCTCTCCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: QGPCSPTFALQSPPPHGHCNTGA*WALPVS
Trigger: GGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCA...ATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGCAGGGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCGCCCTGCAATACAGGTaGCTGCTGGGCTCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: PKENQVHVPLLGYPGLRGALQYR*LLGSPS
Trigger: ACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGC...GCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCCCAGCTCCTGCTAGCTaGGGGCACATGAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GAPATCSRSPAIQVPAGLPAPAS*GHMSQH
Trigger: ATGCTGACTCATGTGCCCGCAGCTAGCAGGAGCTGG...GAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR GCA 90 bp GCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTCACATGCTCCGCCCTTaGCTGGGGGATAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ALQYRCLLGSPSLHGSGSHMLRP*LGDREV
Trigger: CACCTCCCTATCCCCCAGGCAAGGGCGGAGCATGTG...AGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR GCA 90 bp AGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCACCTCCCTCGAGCAGCTaGCCAGACAGCTTCCTAGGT +
Preference number: 4 (lower is better)
Translates to: RCLLGSPSLHGSGSVAVSPPSSS*PDSFLG
Trigger: ACCTAGGAAGCTGTCTGGGCAGCTGCTCGAGGGAGG...TGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR GCA 90 bp GGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCCTGACACTTAGAATTCCCTaGCCCGCCCTGGGACCAAGA +
Preference number: 4 (lower is better)
Translates to: GTEHWERDLQAQTQQEPLTLRIP*PALGPR
Trigger: TCTTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGT...CAGGGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CAGCAGGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGACGGACGGGTGCTCTaGGCATCTGCCCTGAACTTG +
Preference number: 4 (lower is better)
Translates to: QQEPLPHAVGALQYRCLLDGRVL*ASALNL
Trigger: CAAGTTCAGGGCAGATGCCCAGAGCACCCGTCCGTC...CAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000432930.5
CDS-3UTR CCA 90 bp GGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCCTGCCCTGTTTTTACACCGTaGCTGTGTGTGCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: GQSTGRETSRPRRSRSPCPVFTP*LCVPPS
Trigger: GGAGGGAGGCACACACAGCCACGGTGTAAAAACAGG...GCAGGGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000432930.5
CDS-3UTR CCA 90 bp CCTACAGAGCCACCCAGCAACGCCAGGTCCTCGAAGGTCCCTCCAGCCTTGGCCTGGACAGGGCCATCCTaGTGTCTGTGTCTGACTCCC +
Preference number: 4 (lower is better)
Translates to: PTEPPSNARSSKVPPALAWTGPS*CLCLTP
Trigger: GGGAGTCAGACACAGACACCAGGATGGCCCTGTCCA...GGCCAAGGCTGGAGGGACCTTCGAGGACCTGGCGTTGCTGGGTGGCTCTGTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GGGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCCTTACAGGCTCCCGGAATaGGTTGGCAAGTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: GDRALGERPPGPDAAGAPYRLPE*VGKWVS
Trigger: TGACACCCACTTGCCAACCCATTCCGGGAGCCTGTA...AGGGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGAGCACCCTACCAAGGTaGGAGTCAGGGGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: SEPCNTGACWALPVSTGQSTLPR*ESGEGL
Trigger: CAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCT...CTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGAGCACCCTACCAAGGTaGGAGTCAGGGGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: CSRSPAIQVPAGLSQSPRSTLPR*ESGEGL
Trigger: CAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCT...CCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGAGCACCCTACCAAGGTaGGAGTCAGGGGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: GPQGESGARAPPWIPRPQSTLPR*ESGEGL
Trigger: CAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCT...CTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGCACAGCCGACTTCTATaGCTCCCTGAGGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: SEPCNTGACWALPVSTGQHSRLL*LPEAAP
Trigger: GGGTGCTGCCTCAGGGAGCCATAGAAGTCGGCTGTG...CTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGCACAGCCGACTTCTATaGCTCCCTGAGGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: ALPPSPFRAHLPMDMALEHSRLL*LPEAAP
Trigger: GGGTGCTGCCTCAGGGAGCCATAGAAGTCGGCTGTG...CTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGCACAGCCGACTTCTATaGCTCCCTGAGGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: PATCSRSPAIQVPAGLSQHSRLL*LPEAAP
Trigger: GGGTGCTGCCTCAGGGAGCCATAGAAGTCGGCTGTG...CTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp ACTGGGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCAATACAGGTGCCTGCTaGGCTCTCCCAGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: TGDRALGERPPGPDAAGANTGAC*ALPVST
Trigger: CGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATT...GGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTCTGGGGACAGAGCACTaGGAGAGAGACCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: ALQYRCLLGSPSLHGSGSLGTEH*ERDLQA
Trigger: GGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCCAG...AGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTGCTCCGCCCTTGCCTaGGGGATAGGGAGGTGGATT +
Preference number: 4 (lower is better)
Translates to: YRCLLGSPSLHGSGSVAVCSALA*GIGRWI
Trigger: AATCCACCTCCCTATCCCCCAGGCAAGGGCGGAGCA...GACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CCA 90 bp TATGGCTCCCTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCCCACTCCATCCAGCCTaGGATCAGAGCCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: YGSLRQHPTKVGVRGGTVPLHPA*DQSQGL
Trigger: GAGGCCCTGGCTCTGATCCCAGGCTGGATGGAGTGG...GACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAGGGAGCCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCCTGCTTGCCTCCCTGGGGTaGACACTTAGAATTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GTEHWERDLQAQTQQEPLLASLG*TLRIPC
Trigger: GCAGGGAATTCTAAGTGTCCACCCCAGGGAGGCAAG...CAGGGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCCTGCACCTCCCCATGGACATaGCTCTGGAGATTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GQSTGRETSRPRRSRSPCTSPWT*LWRLRG
Trigger: GCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGT...GCAGGGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATGCACGTGCCCCTCCTTaGATACCCAGGCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SPTFALQSPPPHGHGSGDARAPP*IPRPQG
Trigger: CCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGC...ATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTCCTGCACCACCCCACTaGTCTCTTCATGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LRQHPTKVGVRGGTVCWGPAPPH*SLHGCA
Trigger: GGCACAGCCATGAAGAGACCAGTGGGGTGGTGCAGG...ACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp AGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGTAGGTGCCAGTCCTaGGACCACCCTGAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SRSPAIQVPAGLSQSPRVSRCQS*DHPESG
Trigger: CCCTGACTCAGGGTGGTCCCAGGACTGGCACCTACT...GACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp TGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGCTTGGCCAGCCATGTaGCCTGCTGGCGTATCCACT +
Preference number: 4 (lower is better)
Translates to: CSRSPAIQVPAGLSQSPRAWPAM*PAGVST
Trigger: AGTGGATACGCCAGCAGGCCACATGGCTGGCCAAGC...CCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp CACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCGCAGTTGTGGTGGGGTaGATGGGAAGGCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: HMQSEPCNTGACWALPVSAVVVG*MGRPTA
Trigger: GGCTGTGGGCCTTCCCATCCACCCCACCACAACTGC...GGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR TCA 90 bp GGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAACGGGACAGTAGGGGCTaGATTGTGGTTCATAGCGGC +
Preference number: 4 (lower is better)
Translates to: GACWALPVSTGQVLSPSQRDSRG*IVVHSG
Trigger: GCCGCTATGAACCACAATTCAGCCCCTACTGTCCCG...TTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp GACTGTCTGCTGGGGTTCAAGGGTGGAATTCTACCCCCAATCCTCCATGCTGGGGTGCTGAGCTCCGTCTaGGGCACTCGGCCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: DCLLGFKGGILPPILHAGVLSSV*GTRPVG
Trigger: CCCGACTGGCCGAGTGCCTCAGACGGAGCTCAGCAC...CCCAGCATGGAGGATTGGGGGTAGAATTCCACCCTTGAACCCCAGCAGACAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp GACTGTCTGCTGGGGTTCAAGGGTGGAATTCTACCCCCAATCCTCCATGCTGGGCTGGGGCCTCATCCTTaGGATCCCCAGGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: DCLLGFKGGILPPILHAGLGPHP*DPQAGP
Trigger: GGGCCCTGCCTGGGGATCTCAAGGATGAGGCCCCAG...CCCAGCATGGAGGATTGGGGGTAGAATTCCACCCTTGAACCCCAGCAGACAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp CCTGCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGAAAACCTGGCCAGCCTaGGGGAGATCTCGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: PALPPSPFRAHLPMDMALKTWPA*GRSRWC
Trigger: ACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTT...CAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp CAGCAGGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGAAAACCTGGCCAGCCTaGGGGAGATCTCGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: QQEPLPHAVGALQYRCLLKTWPA*GRSRWC
Trigger: ACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTT...CAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp CTGAGGCACTCGGCCAGTCGGGCTTGGGATGCAAGGGCCAGCTCCCTCCACACAGACTTTGTCCAGCCATaGCATCAGCTTCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LRHSASRAWDARASSLHTDFVQP*HQLPLG
Trigger: GCCCAGAGGAAGCTGATGTCATGGCTGGACAAAGTC...TGTGTGGAGGGAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGAGTGCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCTCCACCGTGGCTGTGTGTaGCTCCCTCCCCTTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LHGSGSVAVSKHSRLLWLHRGCV*LPPLRG
Trigger: GCCCCGAAGGGGAGGGAGGCACACACAGCCACGGTG...GAGCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000432930.5
CDS-3UTR GCA 90 bp TATGGCTCCCTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCCCACGAGGTCCCCAATaGGGAACACGGGACAGTAGG +
Preference number: 4 (lower is better)
Translates to: YGSLRQHPTKVGVRGGTVPRGPQ*GTRDSR
Trigger: CCTACTGTCCCGTGTTCCGCATTGGGGACCTCGTGG...GACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAGGGAGCCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GGTCCTGAAGAACCCAATGATCACCAACTTAGCCCTGCCGCCCTCTGCTCTCTCCACGCCCAGCCAAGCTaGCCCGGTGCCCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: GPEEPNDHQLSPAALCSLHAQPS*PGAQCD
Trigger: GTCACACTGGGCACCGGGGCAGCTTGGCTGGGCGTG...GAGAGAGCAGAGGGCGGCAGGGCTAAGTTGGTGATCATTGGGTTCTTCAGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR GCA 90 bp CCCTGGCCCTCCACAGCTTGCCCTGATCACCAGGTACCCACAGTGGAAAGCAGCCACAGAGTTGGCGGTTaGTTTCGGGGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PWPSTACPDHQVPTVESSHRVGG*FRGLGL
Trigger: GAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTG...GCTGCTTTCCACTGTGGGTACCTGGTGATCAGGGCAAGCTGTGGAGGGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp AGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAACCCCCAATCCTCCATaGTGGGGCCTCATCCTTGAG +
Preference number: 4 (lower is better)
Translates to: RCLLGSPSLHGSGSVAVSTPNPP*WGLILE
Trigger: CTCAAGGATGAGGCCCCAGCATGGAGGATTGGGGGT...TGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp AGCAACGCCAGGTCCTCGAAGGTCCCTCCAGCCTTGGCCACGAGGTCCCCAATGACCCCCAATCCTCCATaGTGGGGCCTCATCCTTGAG +
Preference number: 4 (lower is better)
Translates to: SNARSSKVPPALATRSPMTPNPP*WGLILE
Trigger: CTCAAGGATGAGGCCCCAGCATGGAGGATTGGGGGT...CATTGGGGACCTCGTGGCCAAGGCTGGAGGGACCTTCGAGGACCTGGCGTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp TACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTGCAATACAGGTGCCTaGTGGGCTCTCCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: YRCLLGSPSLHGSGSVAVCNTGA*WALPVS
Trigger: GGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCA...GACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTGCCCTGCAATACAGGTaGCTGCTGGGCTCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: ATCSRSPAIQVPAGLSQSALQYR*LLGSPS
Trigger: ACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGC...AGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp AGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCATGCAGTCGGAGCCCTaGAATACAGGTGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SRSPAIQVPAGLSQSPRVMQSEP*NTGACW
Trigger: CCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCAT...GACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGGAGCCCCTGCCACATaGAGTCGGAGCCCTGCAATA +
Preference number: 4 (lower is better)
Translates to: ALQYRCLLGSPSLHGSGSGAPAT*SRSPAI
Trigger: TATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCC...AGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CGGGCTTGGGATGCAAGGGCCAGCTCCCTCCACACAGAGTTGGCGGTTGCTTTCGGAGCCCCTGCCACATaGAGTCGGAGCCCTGCAATA +
Preference number: 4 (lower is better)
Translates to: RAWDARASSLHTELAVAFGAPAT*SRSPAI
Trigger: TATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCC...GAAAGCAACCGCCAACTCTGTGTGGAGGGAGCTGGCCCTTGCATCCCAAGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCCGCAGCAGGAGCCCCTaGCACATGCAGTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: VSTGQVLSPSQNTADFYGRSRSP*HMQSEP
Trigger: GGGCTCCGACTGCATGTGGCAGGGGCTCCTGCTGCG...GCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GGGTTCAAGGGTGGAATTCTACCCCCAATCCTCCATGCTGGGGCCTCATCCTTGCGCAGCAGGAGCCCCTaGCACATGCAGTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GFKGGILPPILHAGASSLRSRSP*HMQSEP
Trigger: GGGCTCCGACTGCATGTGGCAGGGGCTCCTGCTGCG...CAAGGATGAGGCCCCAGCATGGAGGATTGGGGGTAGAATTCCACCCTTGAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp AGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTTCATGGCCCTCCACAGCTTaGCCTGATCACCAGGTACCC +
Preference number: 4 (lower is better)
Translates to: RQHPTKVGVRGGTVCWGSWPSTA*PDHQVP
Trigger: GGGTACCTGGTGATCAGGGCAAGCTGTGGAGGGCCA...TGAACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCAGCAGGCCTCCCTCGAGCAGCTaGCCAGACAGCTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PSEPTSPWTWLWRLRGSRPPSSS*PDSFLC
Trigger: GCAGAGGAAGCTGTCTGGGCAGCTGCTCGAGGGAGG...CCTGCTGCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422210.5
ENST00000432930.5
CDS-3UTR CCA 90 bp CACCCCTGGCCCTCCACAGCTTGCCCTGATCACCAGGTACCCACAGTGGAAAGCCCCTCCACACAGAGTTaGCGGTTGCTTTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: HPWPSTACPDHQVPTVESPSTQS*RLLSGP
Trigger: AGGCCCCGAAAGCAACCGCCAACTCTGTGTGGAGGG...GCTTTCCACTGTGGGTACCTGGTGATCAGGGCAAGCTGTGGAGGGCCAGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TGGGGTGGACACTTAGAATTCCCTGCCCCGCCCTGGGACCAAGAGGAGAATTCCCAGCAGCAGTGGCCGTaGGTGCAGGTGCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: WGGHLEFPAPPWDQEENSQQQWP*VQVLSS
Trigger: GGAGCTCAGCACCTGCACCCACGGCCACTGCTGCTG...GGAATTCTCCTCTTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGTCCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCCCTGCTCTCCCGCTGGGGTTCAAGGGTaGAATTCTACCCCCAATCCT +
Preference number: 4 (lower is better)
Translates to: SGARAPPWIPRPQGPCSPAGVQG*NSTPNP
Trigger: AGGATTGGGGGTAGAATTCCACCCTTGAACCCCAGC...GGGAGAGCAGGGCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp AGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCAGCACCCTACCAAGGTaGGAGTCAGGGGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: SPAIQVPAGLSQSPRVRFSTLPR*ESGEGL
Trigger: CAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCT...GAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp AGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAATACAGGTGCCTGCTaGGCTCTCCCAGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: SRSPAIQVPAGLSQSPRVNTGAC*ALPVST
Trigger: CGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATT...GACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCAGCAGGCTGGGGACAGAGCACTaGGAGAGAGACCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PSEPTSPWTWLWRLRGSRLGTEH*ERDLQA
Trigger: GGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCCAG...CCTGCTGCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TTGCCTCCCTGGGGTGGACACTTAGAATTCCCTGCCCCGCCCTGGGACCAAGAGTTCCCTGCCCCGCCCTaGGACCAAGAGGAGAATTCC +
Preference number: 4 (lower is better)
Translates to: LPPWGGHLEFPAPPWDQEFPAPP*DQEENS
Trigger: GGAATTCTCCTCTTGGTCCCAGGGCGGGGCAGGGAA...CTCTTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGTCCACCCCAGGGAGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TCGAAGGTCCCTCCAGCCTTGGCCACGAGGTCCCCAATGCGGAACACGGGACAGGAGCCCACCTCCCCATaGACATGGCTCTGGAGATTG +
Preference number: 4 (lower is better)
Translates to: SKVPPALATRSPMRNTGQEPTSP*TWLWRL
Trigger: CAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTC...CTGTCCCGTGTTCCGCATTGGGGACCTCGTGGCCAAGGCTGGAGGGACCTTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp ACAGGCTCCCGGAATGGGTTGGCAAGTGGGTGTCAGAACTTGGACAGGGCCATCGCACGTGCCCCTCCTTaGATACCCAGGCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: TGSRNGLASGCQNLDRAIARAPP*IPRPQG
Trigger: CCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGC...GATGGCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCCGGGAGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGCCTCATGCTCCTACATaGGTGCACAAGTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ALPPSPFRAHLPMDMALEPHAPT*VHKCPG
Trigger: GCCTGGGCACTTGTGCACCCATGTAGGAGCATGAGG...CTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR TCA 90 bp GTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAAACACGTTCTCTCCCTaGGGTGGCTTCACGAAGTCG +
Preference number: 4 (lower is better)
Translates to: VGALQYRCLLGSPSLHGSNTFSP*GGFTKS
Trigger: CGACTTCGTGAAGCCACCTCAGGGAGAGAACGTGTT...TGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000432930.5
CDS-3UTR TCA 90 bp CCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGAACACGTTCTCTCCCTaGGGTGGCTTCACGAAGTCG +
Preference number: 4 (lower is better)
Translates to: PATCSRSPAIQVPAGLSQNTFSP*GGFTKS
Trigger: CGACTTCGTGAAGCCACCTCAGGGAGAGAACGTGTT...CTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000432930.5
CDS-3UTR TCA 90 bp GGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCAATCCCAGTGAACTCTaGTGCCTACAGAGCCACCCA +
Preference number: 4 (lower is better)
Translates to: GAPATCSRSPAIQVPAGLNPSEL*CLQSHP
Trigger: TGGGTGGCTCTGTAGGCATCAGAGTTCACTGGGATT...GAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp GGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCCTGAGGTCACAATCCCAGTaGACTCTGATGCCTACAGAG +
Preference number: 4 (lower is better)
Translates to: GTEHWERDLQAQTQQEPLRSQSQ*TLMPTE
Trigger: CTCTGTAGGCATCAGAGTTCACTGGGATTGTGACCT...CAGGGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp AGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTTCAGGTTGCTCCCACCAGTaGGTGGCTGTCCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: RQHPTKVGVRGGTVCWGSGCSHQ*VAVLKL
Trigger: CAACTTCAGGACAGCCACTCACTGGTGGGAGCAACC...TGAACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp TATGGCTCCCTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCGGTTGCTCCCACCAGTaGGTGGCTGTCCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: YGSLRQHPTKVGVRGGTVGCSHQ*VAVLKL
Trigger: CAACTTCAGGACAGCCACTCACTGGTGGGAGCAACC...GACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAGGGAGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp GGGTTCAAGGGTGGAATTCTACCCCCAATCCTCCATGCTGGGGCCTCATCCTTGCGTGGGTGCAGGTGCTaGGCTCCGTCTGAGGCACTC +
Preference number: 4 (lower is better)
Translates to: GFKGGILPPILHAGASSLRGCRC*APSEAL
Trigger: GAGTGCCTCAGACGGAGCTCAGCACCTGCACCCACG...CAAGGATGAGGCCCCAGCATGGAGGATTGGGGGTAGAATTCCACCCTTGAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp TCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTCGTGGGTGCAGGTGCTaGGCTCCGTCTGAGGCACTC +
Preference number: 4 (lower is better)
Translates to: SQSPRVRFCRRLKTQPTSRGCRC*APSEAL
Trigger: GAGTGCCTCAGACGGAGCTCAGCACCTGCACCCACG...AGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp GCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGGACTTTGTCCAGCCATaGCATCAGCTTCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: ALPPSPFRAHLPMDMALEDFVQP*HQLPLG
Trigger: GCCCAGAGGAAGCTGATGTCATGGCTGGACAAAGTC...CTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp CAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCGCCTGTTTTTACACCTaGGGTGGCTTCACGAAGTCG +
Preference number: 4 (lower is better)
Translates to: QVPAGLSQSPRVRFCRRLACFYT*GGFTKS
Trigger: CGACTTCGTGAAGCCACCTCAGGTGTAAAAACAGGC...GAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422210.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CAAGTGGGTGTCAGAACTTGGACAGGGCCATCCTGGTGTCTGTGTCTGACTCCCCTGGGGAGCCCATGCTaGCAGCTCCTGCTAGCTGCG +
Preference number: 4 (lower is better)
Translates to: QVGVRTWTGPSWCLCLTPLGSPC*QLLLAA
Trigger: CGCAGCTAGCAGGAGCTGGCAGCATGGGCTCCCCAG...GGGAGTCAGACACAGACACCAGGATGGCCCTGTCCAAGTTCTGACACCCACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442475.5
CDS-3UTR GCA 90 bp GCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTACCCCCAATCCTCCATaGTGGGGCCTCATCCTTGAG +
Preference number: 4 (lower is better)
Translates to: ATCSRSPAIQVPAGLSQSTPNPP*WGLILE
Trigger: CTCAAGGATGAGGCCCCAGCATGGAGGATTGGGGGT...AGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp AGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTTCAAGGGGAGGGACTGTCTaGTGGGGTTCAAGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: RQHPTKVGVRGGTVCWGSRGGTV*WGSRVE
Trigger: TTCCACCCTTGAACCCCAGCAGACAGTCCCTCCCCT...TGAACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGGCCCTGCAATACAGGTaGCTGCTGGGCTCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: PPSPFRAHLPMDMALEIEALQYR*LLGSPS
Trigger: ACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGC...CTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp TGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGACACTTAGAATTCCCTaGCCCGCCCTGGGACCAAGA +
Preference number: 4 (lower is better)
Translates to: CSRSPAIQVPAGLSQSPRTLRIP*PALGPR
Trigger: TCTTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGT...CCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GCCCTGGGACCAAGAGGAGAATTCCAGCTGCAAAACCTGGCCAGCCTGAGGGAGTGGCCCTCCACAGCTTaGCCTGATCACCAGGTACCC +
Preference number: 4 (lower is better)
Translates to: ALGPRGEFQLQNLASLREWPSTA*PDHQVP
Trigger: GGGTACCTGGTGATCAGGGCAAGCTGTGGAGGGCCA...CTCCCTCAGGCTGGCCAGGTTTTGCAGCTGGAATTCTCCTCTTGGTCCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTAGAATCAGGTGCACGTaGCCCTCCTTGGATACCCAG +
Preference number: 4 (lower is better)
Translates to: LRQHPTKVGVRGGTVCWGRIRCT*PSLDTQ
Trigger: CTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCT...ACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CCTGCCCCGCCCTGGGACCAAGAGGAGAATTCCAGCTGCAAAACCTGGCCAGCCCCAAGGAGAATCAGGTaGACGTGCCCCTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: PAPPWDQEENSSCKTWPAPRRIR*TCPSLD
Trigger: ATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGG...GGCTGGCCAGGTTTTGCAGCTGGAATTCTCCTCTTGGTCCCAGGGCGGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp TGGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAAGCTCGGGCCCAGGCTaGAGCTCTCTTGCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: WAPRRIRCTCPSLDTQASSSGPG*SSLAVF
Trigger: AAAGACAGCAAGAGAGCTGCAGCCTGGGCCCGAGCT...TGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR GCA 90 bp CTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCGGACACATGCATCCCTaGAGGCACTACCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LGSPSLHGSGSVAVSKHSGHMHP*RHYPGV
Trigger: CACCCCAGGGTAGTGCCTGCAGGGATGCATGTGTCC...GCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR GCA 90 bp CTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCTCCATGCACCTGAGGCCTaGCTGGCACAGGCACCCCCA +
Preference number: 4 (lower is better)
Translates to: LHGSGSVAVSKHSRLLWLHAPEA*LAQAPP
Trigger: TGGGGGTGCCTGTGCCAGGCAGGCCTCAGGTGCATG...GAGCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp GGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCCTGCATCTCACAGGTCCTGTaGGTCCCATTGAACACCACA +
Preference number: 4 (lower is better)
Translates to: GQSTGRETSRPRRSRSPCISQVL*VPLNTT
Trigger: TGTGGTGTTCAATGGGACCCACAGGACCTGTGAGAT...GCAGGGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CGCCCTTGCCTGGGGGATAGGGAGGTGGATTATCTGCCTACTCCACCCCATTCCCCCTCCACACAGAGTTaGCGGTTGCTTTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RPCLGDREVDYLPTPPHSPSTQS*RLLSGP
Trigger: AGGCCCCGAAAGCAACCGCCAACTCTGTGTGGAGGG...GGAATGGGGTGGAGTAGGCAGATAATCCACCTCCCTATCCCCCAGGCAAGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CCA 90 bp CAAGTGGGTGTCAGAACTTGGACAGGGCCATCCTGGTGTCTGTGTCTGACTCCCCAGCAGCAGTGGCCGTaGGTGCAGGTGCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: QVGVRTWTGPSWCLCLTPQQQWP*VQVLSS
Trigger: GGAGCTCAGCACCTGCACCCACGGCCACTGCTGCTG...GGGAGTCAGACACAGACACCAGGATGGCCCTGTCCAAGTTCTGACACCCACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTTGGACAGGGCCATCCTaGTGTCTGTGTCTGACTCCC +
Preference number: 4 (lower is better)
Translates to: ATCSRSPAIQVPAGLSQSWTGPS*CLCLTP
Trigger: GGGAGTCAGACACAGACACCAGGATGGCCCTGTCCA...AGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCTGGACAGGGCCATCCTaGTGTCTGTGTCTGACTCCC +
Preference number: 4 (lower is better)
Translates to: HMQSEPCNTGACWALPVSWTGPS*CLCLTP
Trigger: GGGAGTCAGACACAGACACCAGGATGGCCCTGTCCA...GGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp AGCAACGCCAGGTCCTCGAAGGTCCCTCCAGCCTTGGCCACGAGGTCCCCAATGGTGGGTGTCAGAACTTaGACAGGGCCATCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SNARSSKVPPALATRSPMVGVRT*TGPSWC
Trigger: ACACCAGGATGGCCCTGTCCAAGTTCTGACACCCAC...CATTGGGGACCTCGTGGCCAAGGCTGGAGGGACCTTCGAGGACCTGGCGTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCGTGGGTGTCAGAACTTaGACAGGGCCATCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: PKENQVHVPLLGYPGLRGVGVRT*TGPSWC
Trigger: ACACCAGGATGGCCCTGTCCAAGTTCTGACACCCAC...GCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTGCTCCCGGAATGGGTTaGCAAGTGGGTGTCAGAACT +
Preference number: 4 (lower is better)
Translates to: LRQHPTKVGVRGGTVCWGAPGMG*QVGVRT
Trigger: AGTTCTGACACCCACTTGCCAACCCATTCCGGGAGC...ACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGCTCCCGGAATGGGTTaGCAAGTGGGTGTCAGAACT +
Preference number: 4 (lower is better)
Translates to: GPQGESGARAPPWIPRPQAPGMG*QVGVRT
Trigger: AGTTCTGACACCCACTTGCCAACCCATTCCGGGAGC...CTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CAGCAGGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGTACAGGCTCCCGGAATaGGTTGGCAAGTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: QQEPLPHAVGALQYRCLLYRLPE*VGKWVS
Trigger: TGACACCCACTTGCCAACCCATTCCGGGAGCCTGTA...CAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp AGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCCCCAATCCTCCATGCTaGGGCCTCATCCTTGAGATC +
Preference number: 4 (lower is better)
Translates to: SRSPAIQVPAGLSQSPRVPNPPC*GLILEI
Trigger: GATCTCAAGGATGAGGCCCCAGCATGGAGGATTGGG...GACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CAGCAGGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGTCTACCTTGCCTTTTTaGCTCCAGCTGCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: QQEPLPHAVGALQYRCLLSTLPF*LQLHSP
Trigger: GGGGCTGTGCAGCTGGAGCCAAAAAGGCAAGGTAGA...CAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CCA 90 bp CCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGGCACATGAGTCAGCATaGCAGCTGCAGCCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PPSPFRAHLPMDMALEIEAHESA*QLQPQL
Trigger: CAGCTGCGGCTGCAGCTGCCATGCTGACTCATGTGC...CTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp GGGGCCTCGAGGGCACAACGCCACTCTCCACGGGGCACCAACTCCAGATCTCACTGGGGGATAGGGAGGTaGATTATCTGCCTACTCCAC +
Preference number: 4 (lower is better)
Translates to: GASRAQRHSPRGTNSRSHWGIGR*IICLLH
Trigger: GTGGAGTAGGCAGATAATCCACCTCCCTATCCCCCA...GTGAGATCTGGAGTTGGTGCCCCGTGGAGAGTGGCGTTGTGCCCTCGAGGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442475.5
CDS-3UTR CCA 90 bp CCTGCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGGCTCTCAGGAAGCCTaGAGGAAAGATTCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: PALPPSPFRAHLPMDMALGSQEA*RKDSKG
Trigger: CCCCTTGGAATCTTTCCTCCAGGCTTCCTGAGAGCC...CAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CCA 90 bp GTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCACTTGCCTCCCTGGGGTaGACACTTAGAATTCCCTGC +
Preference number: 4 (lower is better)
Translates to: VGALQYRCLLGSPSLHGSLASLG*TLRIPC
Trigger: GCAGGGAATTCTAAGTGTCCACCCCAGGGAGGCAAG...TGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TATGGCTCCCTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCACCAGGTACCCACAGTaGAAAGCAGCCCCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: YGSLRQHPTKVGVRGGTVTRYPQ*KAAPCL
Trigger: GAGGCAAGGGGCTGCTTTCCACTGTGGGTACCTGGT...GACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAGGGAGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CCCTTGCCTCCCTGGGGTGGACACTTAGAATTCCCTGCCCCGCCCTGGGACCAACCATGGACATGGCTCTaGAGATTGAGAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PLPPWGGHLEFPAPPWDQPWTWL*RLRGSR
Trigger: CCTGCTGCCTCTCAATCTCCAGAGCCATGTCCATGG...TTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGTCCACCCCAGGGAGGCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TACAGAGCCACCCAGCAACGCCAGGTCCTCGAAGGTCCCTCCAGCCTTGGCCACACCTCCCCATGGACATaGCTCTGGAGATTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: YRATQQRQVLEGPSSLGHTSPWT*LWRLRG
Trigger: GCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGT...GTGGCCAAGGCTGGAGGGACCTTCGAGGACCTGGCGTTGCTGGGTGGCTCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTGAGCCCACCTCCCCATaGACATGGCTCTGGAGATTG +
Preference number: 4 (lower is better)
Translates to: ATCSRSPAIQVPAGLSQSEPTSP*TWLWRL
Trigger: CAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTC...AGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp CGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCAGCAACACGTTCTCTCCCTaGGGTGGCTTCACGAAGTCG +
Preference number: 4 (lower is better)
Translates to: RPSEPTSPWTWLWRLRGSNTFSP*GGFTKS
Trigger: CGACTTCGTGAAGCCACCTCAGGGAGAGAACGTGTT...GCTGCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000432930.5
CDS-3UTR TCA 90 bp AGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAATCCCAGTGAACTCTaGTGCCTACAGAGCCACCCA +
Preference number: 4 (lower is better)
Translates to: RCLLGSPSLHGSGSVAVSNPSEL*CLQSHP
Trigger: TGGGTGGCTCTGTAGGCATCAGAGTTCACTGGGATT...TGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp TGTGAAGTTCTGGGCCTGGGCCAGCAGGGGCCTCGAGGGCACAACGCCACTCTCAGGTCACAATCCCAGTaGACTCTGATGCCTACAGAG +
Preference number: 4 (lower is better)
Translates to: CEVLGLGQQGPRGHNATLRSQSQ*TLMPTE
Trigger: CTCTGTAGGCATCAGAGTTCACTGGGATTGTGACCT...GAGAGTGGCGTTGTGCCCTCGAGGCCCCTGCTGGCCCAGGCCCAGAACTTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp TGCTGGCTTTACTCCGTGACTTTGTCCAGCCATGACATCAGCTTCCTCTGGGCCCGTGGGTGCAGGTGCTaGGCTCCGTCTGAGGCACTC +
Preference number: 4 (lower is better)
Translates to: CWLYSVTLSSHDISFLWARGCRC*APSEAL
Trigger: GAGTGCCTCAGACGGAGCTCAGCACCTGCACCCACG...GGCCCAGAGGAAGCTGATGTCATGGCTGGACAAAGTCACGGAGTAAAGCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp TGGGGTGGACACTTAGAATTCCCTGCCCCGCCCTGGGACCAAGAGGAGAATTCCCTAGCTGCGGGCACATaGGTCAGCATGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: WGGHLEFPAPPWDQEENSLAAGT*VSMAAA
Trigger: TGCAGCTGCCATGCTGACTCATGTGCCCGCAGCTAG...GGAATTCTCCTCTTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGTCCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR TCA 90 bp CAGCAGGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGCTGGCTTTACTCCGTaGCTTTGTCCAGCCATGACA +
Preference number: 4 (lower is better)
Translates to: QQEPLPHAVGALQYRCLLAGFTP*LCPAMT
Trigger: TGTCATGGCTGGACAAAGTCACGGAGTAAAGCCAGC...CAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp CCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGGCTGGCTTTACTCCGTaGCTTTGTCCAGCCATGACA +
Preference number: 4 (lower is better)
Translates to: PATCSRSPAIQVPAGLSQAGFTP*LCPAMT
Trigger: TGTCATGGCTGGACAAAGTCACGGAGTAAAGCCAGC...CTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GAGGCAGCAGGGACCCCAGGCATTTTACTGAGGCTCCAGGTGGCAGGTGATTCTCCACGAGGTCCCCAATaGGGAACACGGGACAGTAGG +
Preference number: 4 (lower is better)
Translates to: EAAGTPGILLRLQVAGDSPRGPQ*GTRDSR
Trigger: CCTACTGTCCCGTGTTCCGCATTGGGGACCTCGTGG...AGAATCACCTGCCACCTGGAGCCTCAGTAAAATGCCTGGGGTCCCTGCTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CGCCCTTGCCTGGGGGATAGGGAGGTGGATTATCTGCCTACTCCACCCCATTCCACCCCCAATCCTCCATaGTGGGGCCTCATCCTTGAG +
Preference number: 4 (lower is better)
Translates to: RPCLGDREVDYLPTPPHSTPNPP*WGLILE
Trigger: CTCAAGGATGAGGCCCCAGCATGGAGGATTGGGGGT...GGAATGGGGTGGAGTAGGCAGATAATCCACCTCCCTATCCCCCAGGCAAGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR GCA 90 bp CTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTACCCCCAATCCTCCATaGTGGGGCCTCATCCTTGAG +
Preference number: 4 (lower is better)
Translates to: LPPSPFRAHLPMDMALEITPNPP*WGLILE
Trigger: CTCAAGGATGAGGCCCCAGCATGGAGGATTGGGGGT...AATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GGCTACAGGCTCCCGGAATGGGTTGGCAAGTGGGTGTCAGAACTTGGACAGGGCAGGGGAGGGACTGTCTaGTGGGGTTCAAGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: GYRLPEWVGKWVSELGQGRGGTV*WGSRVE
Trigger: TTCCACCCTTGAACCCCAGCAGACAGTCCCTCCCCT...GCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCCGGGAGCCTGTAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp AGTGAGGCCAGCAGCCAGAGTCCCCGGTGTCCAGGTCACAATCCCAGTGAACTCAGGGGAGGGACTGTCTaGTGGGGTTCAAGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: SEASSQSPRCPGHNPSELRGGTV*WGSRVE
Trigger: TTCCACCCTTGAACCCCAGCAGACAGTCCCTCCCCT...GAGTTCACTGGGATTGTGACCTGGACACCGGGGACTCTGGCTGCTGGCCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp TCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATAGGGGAGGGACTGTCTaGTGGGGTTCAAGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: SPTFALQSPPPHGHGSGDRGGTV*WGSRVE
Trigger: TTCCACCCTTGAACCCCAGCAGACAGTCCCTCCCCT...ATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp AGGCCAGCAGCCAGAGTCCCCGGTGTCCAGGTCACAATCCCAGTGAACTCTGATGCCCTGCAATACAGGTaGCTGCTGGGCTCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: RPAARVPGVQVTIPVNSDALQYR*LLGSPS
Trigger: ACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGC...ATCAGAGTTCACTGGGATTGTGACCTGGACACCGGGGACTCTGGCTGCTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCAGCAGGATGCAGTCGGAGCCCTaGAATACAGGTGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PSEPTSPWTWLWRLRGSRMQSEP*NTGACW
Trigger: CCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCAT...CCTGCTGCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTTCAACTTTTTGGCTCCAGCTaGACAGCCCCATGTAGGACC +
Preference number: 4 (lower is better)
Translates to: GSTLPRWESGEGLSAGVQLFGSS*TAPCRT
Trigger: GGTCCTACATGGGGCTGTGCAGCTGGAGCCAAAAAG...TTGAACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000442475.5
CDS-3UTR GCA 90 bp CTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCCAGCTCCTGCTAGCTaGGGGCACATGAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: LGSPSLHGSGSVAVSKHSPAPAS*GHMSQH
Trigger: ATGCTGACTCATGTGCCCGCAGCTAGCAGGAGCTGG...GCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR GCA 90 bp CACCCCTGGCCCTCCACAGCTTGCCCTGATCACCAGGTACCCACAGTGGAAAGCGGGAGGTGGATTATCTaGCTACTCCACCCCATTCCC +
Preference number: 4 (lower is better)
Translates to: HPWPSTACPDHQVPTVESGRWII*LLHPIP
Trigger: GGGAATGGGGTGGAGTAGGCAGATAATCCACCTCCC...GCTTTCCACTGTGGGTACCTGGTGATCAGGGCAAGCTGTGGAGGGCCAGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR GCA 90 bp GCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTGGGAGGTGGATTATCTaGCTACTCCACCCCATTCCC +
Preference number: 4 (lower is better)
Translates to: ATCSRSPAIQVPAGLSQSGRWII*LLHPIP
Trigger: GGGAATGGGGTGGAGTAGGCAGATAATCCACCTCCC...AGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR GCA 90 bp CCCCCAACTCTCAACCAGCAGGGAACGGCTACAGGCTCCCGGAATGGGTTGGCAACACTTAGAATTCCCTaGCCCGCCCTGGGACCAAGA +
Preference number: 4 (lower is better)
Translates to: PPTLNQQGTATGSRNGLATLRIP*PALGPR
Trigger: TCTTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGT...TGCCAACCCATTCCGGGAGCCTGTAGCCGTTCCCTGCTGGTTGAGAGTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CGGTTGCTTTCGGGGCCTTGGCCTCCTCATACTTTGTCCTCCAGTAGAAATGGGAGGCCTCAGGGGCCCTaGTCTCCCACCTTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: RLLSGPWPPHTLSSSRNGRPQGP*SPTFAL
Trigger: AAGGGCGAAGGTGGGAGAGCAGGGCCCCTGAGGCCT...CCCATTTCTACTGGAGGACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp TCCCTGCCCCGCCCTGGGACCAAGAGGAGAATTCCAGCTGCAAAACCTGGCCAGAGAATCAGGTGCACGTaGCCCTCCTTGGATACCCAG +
Preference number: 4 (lower is better)
Translates to: SLPRPGTKRRIPAAKPGQRIRCT*PSLDTQ
Trigger: CTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCT...CTGGCCAGGTTTTGCAGCTGGAATTCTCCTCTTGGTCCCAGGGCGGGGCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CCTGCCCCGCCCTGGGACCAAGAGGAGAATTCCAGCTGCAAAACCTGGCCAGCCACATGGGTGCACAAGTaGCCAGGCCTGTTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: PAPPWDQEENSSCKTWPATWVHK*PGLFQL
Trigger: TAACTGGAACAGGCCTGGGCACTTGTGCACCCATGT...GGCTGGCCAGGTTTTGCAGCTGGAATTCTCCTCTTGGTCCCAGGGCGGGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR GCA 90 bp CCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCAGGCTGCAGCTCTCTTaGTGTCTTTGCCCACTCTTC +
Preference number: 4 (lower is better)
Translates to: PKENQVHVPLLGYPGLRGRLQLS*CLCPLF
Trigger: GAAGAGTGGGCAAAGACAGCAAGAGAGCTGCAGCCT...GCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp GTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCCCAGCAGTTAGCCAGTaGGACGGACGGGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VSTGQVLSPSQNTADFYGPAVSQ*DGRVLW
Trigger: CCAGAGCACCCGTCCGTCCCACTGGCTAACTGCTGG...GCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000432930.5
CDS-3UTR CCA 90 bp GGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTTCAACCTGTTTTTACACCGTaGCTGTGTGTGCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: GSTLPRWESGEGLSAGVQPVFTP*LCVPPS
Trigger: GGAGGGAGGCACACACAGCCACGGTGTAAAAACAGG...TTGAACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000432930.5
CDS-3UTR CCA 90 bp CTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTTTGCTTTCGGGGCCTTaGCCTCCTCATACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LRQHPTKVGVRGGTVCWGLLSGP*PPHTLS
Trigger: GGACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAA...ACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TCGAAGGTCCCTCCAGCCTTGGCCACGAGGTCCCCAATGCGGAACACGGGACAGTTGCTTTCGGGGCCTTaGCCTCCTCATACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: SKVPPALATRSPMRNTGQLLSGP*PPHTLS
Trigger: GGACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAA...CTGTCCCGTGTTCCGCATTGGGGACCTCGTGGCCAAGGCTGGAGGGACCTTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCTTGCTTTCGGGGCCTTaGCCTCCTCATACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: PKENQVHVPLLGYPGLRGLLSGP*PPHTLS
Trigger: GGACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAA...GCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CTGCTCTCTCTCCCAGACCTCCATGGCAAAAGGGCTACCACTGGAAAGCAGCCGCCCTCCACACAGAGTTaGCGGTTGCTTTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LLSLPDLHGKRATTGKQPPSTQS*RLLSGP
Trigger: AGGCCCCGAAAGCAACCGCCAACTCTGTGTGGAGGG...CGGCTGCTTTCCAGTGGTAGCCCTTTTGCCATGGAGGTCTGGGAGAGAGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CCA 90 bp GCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTGGGTGTCAGAACTTaGACAGGGCCATCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: ALQYRCLLGSPSLHGSGSVGVRT*TGPSWC
Trigger: ACACCAGGATGGCCCTGTCCAAGTTCTGACACCCAC...AGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTTCAAGTGGGTGTCAGAACTTaGACAGGGCCATCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: GSTLPRWESGEGLSAGVQVGVRT*TGPSWC
Trigger: ACACCAGGATGGCCCTGTCCAAGTTCTGACACCCAC...TTGAACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CACCCCTGGCCCTCCACAGCTTGCCCTGATCACCAGGTACCCACAGTGGAAAGCGTGGGTGTCAGAACTTaGACAGGGCCATCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: HPWPSTACPDHQVPTVESVGVRT*TGPSWC
Trigger: ACACCAGGATGGCCCTGTCCAAGTTCTGACACCCAC...GCTTTCCACTGTGGGTACCTGGTGATCAGGGCAAGCTGTGGAGGGCCAGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CACCCCTGGCCCTCCACAGCTTGCCCTGATCACCAGGTACCCACAGTGGAAAGCTACAGGCTCCCGGAATaGGTTGGCAAGTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: HPWPSTACPDHQVPTVESYRLPE*VGKWVS
Trigger: TGACACCCACTTGCCAACCCATTCCGGGAGCCTGTA...GCTTTCCACTGTGGGTACCTGGTGATCAGGGCAAGCTGTGGAGGGCCAGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCCAATCCTCCATGCTaGGGCCTCATCCTTGAGATC +
Preference number: 4 (lower is better)
Translates to: ATCSRSPAIQVPAGLSQSPNPPC*GLILEI
Trigger: GATCTCAAGGATGAGGCCCCAGCATGGAGGATTGGG...AGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp AGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCGCTGGGGTTCAAGGGTaGAATTCTACCCCCAATCCT +
Preference number: 4 (lower is better)
Translates to: SRSPAIQVPAGLSQSPRVAGVQG*NSTPNP
Trigger: AGGATTGGGGGTAGAATTCCACCCTTGAACCCCAGC...GACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp AGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTTCAGGAGGGACTGTCTGCTaGGGTTCAAGGGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: RQHPTKVGVRGGTVCWGSGGTVC*GSRVEF
Trigger: GAATTCCACCCTTGAACCCCAGCAGACAGTCCCTCC...TGAACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp AAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCCCTGGAGGGACTGTCTGCTaGGGTTCAAGGGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: KENQVHVPLLGYPGLRGPGGTVC*GSRVEF
Trigger: GAATTCCACCCTTGAACCCCAGCAGACAGTCCCTCC...AGGGCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TTCTATGGCTCCCTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTAATACAGGTGCCTGCTaGGCTCTCCCAGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: FYGSLRQHPTKVGVRGGTNTGAC*ALPVST
Trigger: CGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATT...AGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAGGGAGCCATAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCAATACAGGTGCCTGCTaGGCTCTCCCAGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: LRPSEPTSPWTWLWRLRGNTGAC*ALPVST
Trigger: CGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATT...GCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp AGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTTCATCTACCTTGCCTTTTTaGCTCCAGCTGCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: RQHPTKVGVRGGTVCWGSSTLPF*LQLHSP
Trigger: GGGGCTGTGCAGCTGGAGCCAAAAAGGCAAGGTAGA...TGAACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CCA 90 bp AGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCTGGGGGATAGGGAGGTaGATTATCTGCCTACTCCAC +
Preference number: 4 (lower is better)
Translates to: SRSPAIQVPAGLSQSPRVWGIGR*IICLLH
Trigger: GTGGAGTAGGCAGATAATCCACCTCCCTATCCCCCA...GACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CCA 90 bp GTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCACAAAAGGGCTACCACTaGAAAGCAGCCGGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VGALQYRCLLGSPSLHGSQKGYH*KAAGPH
Trigger: ATGAGGACCGGCTGCTTTCCAGTGGTAGCCCTTTTG...TGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CCA 90 bp TCCCTGCCCCGCCCTGGGACCAAGAGGAGAATTCCAGCTGCAAAACCTGGCCAGTCTCCCAGACCTCCATaGCAAAAGGGCTACCACTGG +
Preference number: 4 (lower is better)
Translates to: SLPRPGTKRRIPAAKPGQSPRPP*QKGYHW
Trigger: CCAGTGGTAGCCCTTTTGCCATGGAGGTCTGGGAGA...CTGGCCAGGTTTTGCAGCTGGAATTCTCCTCTTGGTCCCAGGGCGGGGCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CCA 90 bp TCAGCTTCCTCTGGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATATTCCCTGCCCCGCCCTaGGACCAAGAGGAGAATTCC +
Preference number: 4 (lower is better)
Translates to: SASSGPQGESGARAPPWIFPAPP*DQEENS
Trigger: GGAATTCTCCTCTTGGTCCCAGGGCGGGGCAGGGAA...TATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCCAGAGGAAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCAGCCCCTTGCCTCCCTaGGGTGGACACTTAGAATTC +
Preference number: 4 (lower is better)
Translates to: HMQSEPCNTGACWALPVSSPLPP*GGHLEF
Trigger: GAATTCTAAGTGTCCACCCCAGGGAGGCAAGGGGCT...GGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TTGCCTCCCTGGGGTGGACACTTAGAATTCCCTGCCCCGCCCTGGGACCAAGAGAGCCCCTTGCCTCCCTaGGGTGGACACTTAGAATTC +
Preference number: 4 (lower is better)
Translates to: LPPWGGHLEFPAPPWDQESPLPP*GGHLEF
Trigger: GAATTCTAAGTGTCCACCCCAGGGAGGCAAGGGGCT...CTCTTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGTCCACCCCAGGGAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTCCATGGACATGGCTCTaGAGATTGAGAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ALQYRCLLGSPSLHGSGSPWTWL*RLRGSR
Trigger: CCTGCTGCCTCTCAATCTCCAGAGCCATGTCCATGG...AGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATGAGCCCACCTCCCCATaGACATGGCTCTGGAGATTG +
Preference number: 4 (lower is better)
Translates to: SPTFALQSPPPHGHGSGDEPTSP*TWLWRL
Trigger: CAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTC...ATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CAA 72 bp ATAGAGCTTGAGCAGGGTGCGGGCCTCCACACCCGGTaGCTCCCACCAGTGAGTGGCTGTCCTGAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: IELEQGAGLHTR*LPPVSGCPEVV
Trigger: TACAACTTCAGGACAGCCACTCACTGGTGGGAGCAACCGGGTGTGGAGGCCCGCACCCTGCTCAAGCTCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CAA 72 bp ATGCAAGGGCCAGCTCCCTCCACACAGAGTTGGCGGTaGCTTTCGGGGCCTTGGCCTCCTCATACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: MQGPAPSTQSWR*LSGPWPPHTLS
Trigger: GGACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGTGGAGGGAGCTGGCCCTTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CAA 72 bp AACCAGCAGGGAACGGCTACAGGCTCCCGGAATGGGTaGGCAAGTGGGTGTCAGAACTTGGACAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: NQQGTATGSRNG*ASGCQNLDRAI
Trigger: GATGGCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCCGGGAGCCTGTAGCCGTTCCCTGCTGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp CGGGCTTGGGATGCAAGGGCCAGCTCCCTCCACACAGAGTTGGCGGTTGCTTTCAATCCCAGTGAACTCTaGTGCCTACAGAGCCACCCA +
Preference number: 4 (lower is better)
Translates to: RAWDARASSLHTELAVAFNPSEL*CLQSHP
Trigger: TGGGTGGCTCTGTAGGCATCAGAGTTCACTGGGATT...GAAAGCAACCGCCAACTCTGTGTGGAGGGAGCTGGCCCTTGCATCCCAAGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp AAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCTCCCTGCCTGCCCGGTaGCGAGGATGTCGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: KPGQPEGDLGGVVWNHSFSLPAR*RGCRSG
Trigger: TCCGCTTCGACATCCTCGTCACCGGGCAGGCAGGGA...GAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp ACAGGCTCCCGGAATGGGTTGGCAAGTGGGTGTCAGAACTTGGACAGGGCCATCAAAACCTGGCCAGCCTaGGGGAGATCTCGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: TGSRNGLASGCQNLDRAIKTWPA*GRSRWC
Trigger: ACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTT...GATGGCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCCGGGAGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp CCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCAGCAGGGACTTTGTCCAGCCATaGCATCAGCTTCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PSEPTSPWTWLWRLRGSRDFVQP*HQLPLG
Trigger: GCCCAGAGGAAGCTGATGTCATGGCTGGACAAAGTC...CCTGCTGCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp CACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCGCTGGCTTTACTCCGTaGCTTTGTCCAGCCATGACA +
Preference number: 4 (lower is better)
Translates to: HMQSEPCNTGACWALPVSAGFTP*LCPAMT
Trigger: TGTCATGGCTGGACAAAGTCACGGAGTAAAGCCAGC...GGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp AGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCACTCTTCAAGGGCTTTaGGGTGAAAAGAGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SRSPAIQVPAGLSQSPRVTLQGL*GEKSVA
Trigger: GGCCACACTCTTTTCACCTCAAAGCCCTTGAAGAGT...GACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR TCA 90 bp GTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCGATCCAGGTGCCCAGTaGAGAGGGGAGCCACACACA +
Preference number: 4 (lower is better)
Translates to: VSTGQVLSPSQNTADFYGDPGAQ*RGEPHT
Trigger: TGTGTGTGGCTCCCCTCTTCACTGGGCACCTGGATC...GCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR GCA 90 bp GGGTTCAAGGGTGGAATTCTACCCCCAATCCTCCATGCTGGGGCCTCATCCTTGCCACGAGGTCCCCAATaGGGAACACGGGACAGTAGG +
Preference number: 4 (lower is better)
Translates to: GFKGGILPPILHAGASSLPRGPQ*GTRDSR
Trigger: CCTACTGTCCCGTGTTCCGCATTGGGGACCTCGTGG...CAAGGATGAGGCCCCAGCATGGAGGATTGGGGGTAGAATTCCACCCTTGAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCTCCACAGAGTTGGCGGTTaGTTTCGGGGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LHGSGSVAVSKHSRLLWLHRVGG*FRGLGL
Trigger: GAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTG...GAGCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp TCAGCTTCCTCTGGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATATGCAATACAGGTGCCTaGTGGGCTCTCCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: SASSGPQGESGARAPPWICNTGA*WALPVS
Trigger: GGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCA...TATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCCAGAGGAAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp TGGGGTGGACACTTAGAATTCCCTGCCCCGCCCTGGGACCAAGAGGAGAATTCCATGCAGTCGGAGCCCTaGAATACAGGTGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: WGGHLEFPAPPWDQEENSMQSEP*NTGACW
Trigger: CCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCAT...GGAATTCTCCTCTTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGTCCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTCTTTTTGGCTCCAGCTaGACAGCCCCATGTAGGACC +
Preference number: 4 (lower is better)
Translates to: LPPSPFRAHLPMDMALEILFGSS*TAPCRT
Trigger: GGTCCTACATGGGGCTGTGCAGCTGGAGCCAAAAAG...AATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR GCA 90 bp CTCCACACAGAGTTGGCGGTTGCTTTCGGGGCCTTGGCCTCCTCATACTTTGTCTGGCCCTCCACAGCTTaGCCTGATCACCAGGTACCC +
Preference number: 4 (lower is better)
Translates to: LHTELAVAFGALASSYFVWPSTA*PDHQVP
Trigger: GGGTACCTGGTGATCAGGGCAAGCTGTGGAGGGCCA...GACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GCTACAGGCTCCCGGAATGGGTTGGCAAGTGGGTGTCAGAACTTGGACAGGGCCCCAAGGAGAATCAGGTaGACGTGCCCCTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: ATGSRNGLASGCQNLDRAPRRIR*TCPSLD
Trigger: ATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGG...GGCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCCGGGAGCCTGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCAAGCCCACCTGGTAGCTaGAGGGCCTCAGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GQPEGDLGGVVWNHSFQPSPPGS*RASVFR
Trigger: CCTGAAGACTGAGGCCCTGCAGCTACCAGGTGGGCT...TGGCTGGAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR GCA 90 bp CTGCAAAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTGGGCCTGGATCCAGGTaGCCAGTGAAGAGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LQNLASLREISVVLFGTIGPGSR*PVKRGA
Trigger: GGCTCCCCTCTTCACTGGGCACCTGGATCCAGGCCC...AATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR GCA 90 bp AAGTGCCCAGGCCTGTTCCAGTTACCTTCTAGCCCACCTGGTAGCTGCAGGGCCCACCAAGTCTTCACCTaGCCCAGGGAACCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: KCPGLFQLPSSPPGSCRAHQVFT*PREPGN
Trigger: ATTGCCTGGTTCCCTGGGGCAGGTGAAGACTTGGTG...GGCCCTGCAGCTACCAGGTGGGCTAGAAGGTAACTGGAACAGGCCTGGGCACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp CTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCTCGACGGACGGGTGCTCTaGGCATCTGCCCTGAACTTG +
Preference number: 4 (lower is better)
Translates to: LHGSGSVAVSKHSRLLWLDGRVL*ASALNL
Trigger: CAAGTTCAGGGCAGATGCCCAGAGCACCCGTCCGTC...GAGCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000432930.5
CDS-3UTR CCA 90 bp CAGCAGGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGTAGGGGCTGAATTGTaGTTCATAGCGGCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: QQEPLPHAVGALQYRCLLVGAEL*FIAAVL
Trigger: AAGCACTGCCGCTATGAACCACAATTCAGCCCCTAC...CAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCGTAGGGGCTGAATTGTaGTTCATAGCGGCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: YRCLLGSPSLHGSGSVAVVGAEL*FIAAVL
Trigger: AAGCACTGCCGCTATGAACCACAATTCAGCCCCTAC...GACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTCCCTCCACACAGAGTTaGCGGTTGCTTTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SQSPRVRFCRRLKTQPTSPSTQS*RLLSGP
Trigger: AGGCCCCGAAAGCAACCGCCAACTCTGTGTGGAGGG...AGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CTGCAAAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTTCGGCCAGTCGGGCTTaGGATGCAAGGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LQNLASLREISVVLFGTISASRA*DARASS
Trigger: GGAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGA...AATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CTGCAAAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCAGCAGCAGTGGCCGTaGGTGCAGGTGCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LQNLASLREISVVLFGTIQQQWP*VQVLSS
Trigger: GGAGCTCAGCACCTGCACCCACGGCCACTGCTGCTG...AATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TCGAAGGTCCCTCCAGCCTTGGCCACGAGGTCCCCAATGCGGAACACGGGACAGGAATGGGTTGGCAAGTaGGTGTCAGAACTTGGACAG +
Preference number: 4 (lower is better)
Translates to: SKVPPALATRSPMRNTGQEWVGK*VSELGQ
Trigger: CTGTCCAAGTTCTGACACCCACTTGCCAACCCATTC...CTGTCCCGTGTTCCGCATTGGGGACCTCGTGGCCAAGGCTGGAGGGACCTTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGCTGGGGTTCAAGGGTaGAATTCTACCCCCAATCCT +
Preference number: 4 (lower is better)
Translates to: ALQYRCLLGSPSLHGSGSAGVQG*NSTPNP
Trigger: AGGATTGGGGGTAGAATTCCACCCTTGAACCCCAGC...AGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCAGCGCTGGGGTTCAAGGGTaGAATTCTACCCCCAATCCT +
Preference number: 4 (lower is better)
Translates to: RPSEPTSPWTWLWRLRGSAGVQG*NSTPNP
Trigger: AGGATTGGGGGTAGAATTCCACCCTTGAACCCCAGC...GCTGCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCGGAGGGACTGTCTGCTaGGGTTCAAGGGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: LRPSEPTSPWTWLWRLRGGGTVC*GSRVEF
Trigger: GAATTCCACCCTTGAACCCCAGCAGACAGTCCCTCC...GCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GACTGTCTGCTGGGGTTCAAGGGTGGAATTCTACCCCCAATCCTCCATGCTGGGCACAGCCGACTTCTATaGCTCCCTGAGGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: DCLLGFKGGILPPILHAGHSRLL*LPEAAP
Trigger: GGGTGCTGCCTCAGGGAGCCATAGAAGTCGGCTGTG...CCCAGCATGGAGGATTGGGGGTAGAATTCCACCCTTGAACCCCAGCAGACAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp ACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACTTGCCTCCCTGGGGTaGACACTTAGAATTCCCTGC +
Preference number: 4 (lower is better)
Translates to: TCSRSPAIQVPAGLSQSPLASLG*TLRIPC
Trigger: GCAGGGAATTCTAAGTGTCCACCCCAGGGAGGCAAG...TGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCCTTGCCTCCCTGGGGTaGACACTTAGAATTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LRPSEPTSPWTWLWRLRGLASLG*TLRIPC
Trigger: GCAGGGAATTCTAAGTGTCCACCCCAGGGAGGCAAG...GCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GCTCCCGGAATGGGTTGGCAAGTGGGTGTCAGAACTTGGACAGGGCCATCCTGGAGCCCCTTGCCTCCCTaGGGTGGACACTTAGAATTC +
Preference number: 4 (lower is better)
Translates to: APGMGWQVGVRTWTGPSWSPLPP*GGHLEF
Trigger: GAATTCTAAGTGTCCACCCCAGGGAGGCAAGGGGCT...CCAGGATGGCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCCGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CGCCCTTGCCTGGGGGATAGGGAGGTGGATTATCTGCCTACTCCACCCCATTCCACCTCCCCATGGACATaGCTCTGGAGATTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RPCLGDREVDYLPTPPHSTSPWT*LWRLRG
Trigger: GCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGT...GGAATGGGGTGGAGTAGGCAGATAATCCACCTCCCTATCCCCCAGGCAAGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CCA 90 bp GCTACAGGCTCCCGGAATGGGTTGGCAAGTGGGTGTCAGAACTTGGACAGGGCCACCTCCCCATGGACATaGCTCTGGAGATTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: ATGSRNGLASGCQNLDRATSPWT*LWRLRG
Trigger: GCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGT...GGCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCCGGGAGCCTGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GGTCCTGAAGAACCCAATGATCACCAACTTAGCCCTGCCGCCCTCTGCTCTCTCCCCACGTCTGCTAGGTaGCAGATCCAGGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GPEEPNDHQLSPAALCSLPTSAR*QIQGAE
Trigger: CTCTGCTCCCTGGATCTGCCACCTAGCAGACGTGGG...GAGAGAGCAGAGGGCGGCAGGGCTAAGTTGGTGATCATTGGGTTCTTCAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp GCCCTGGGACCAAGAGGAGAATTCCAGCTGCAAAACCTGGCCAGCCTGAGGGAGAGCCATGTGGCCTGCTaGCGTATCCACTGTGGCATT +
Preference number: 4 (lower is better)
Translates to: ALGPRGEFQLQNLASLRESHVAC*RIHCGI
Trigger: AATGCCACAGTGGATACGCCAGCAGGCCACATGGCT...CTCCCTCAGGCTGGCCAGGTTTTGCAGCTGGAATTCTCCTCTTGGTCCCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp CTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCTCTTGTGGTGGGGTGGATaGGAAGGCCCACAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LHGSGSVAVSKHSRLLWLLWWGG*EGPQPK
Trigger: CTTGGGCTGTGGGCCTTCCCATCCACCCCACCACAA...GAGCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR TCA 90 bp GCCCTGGGACCAAGAGGAGAATTCCAGCTGCAAAACCTGGCCAGCCTGAGGGAGAATCCCAGTGAACTCTaGTGCCTACAGAGCCACCCA +
Preference number: 4 (lower is better)
Translates to: ALGPRGEFQLQNLASLRENPSEL*CLQSHP
Trigger: TGGGTGGCTCTGTAGGCATCAGAGTTCACTGGGATT...CTCCCTCAGGCTGGCCAGGTTTTGCAGCTGGAATTCTCCTCTTGGTCCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CGGTTGCTTTCGGGGCCTTGGCCTCCTCATACTTTGTCCTCCAGTAGAAATGGGCACAGAGTTGGCGGTTaGTTTCGGGGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RLLSGPWPPHTLSSSRNGHRVGG*FRGLGL
Trigger: GAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTG...CCCATTTCTACTGGAGGACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GGGTTCAAGGGTGGAATTCTACCCCCAATCCTCCATGCTGGGGCCTCATCCTTGAGGGGAGGGACTGTCTaGTGGGGTTCAAGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: GFKGGILPPILHAGASSLRGGTV*WGSRVE
Trigger: TTCCACCCTTGAACCCCAGCAGACAGTCCCTCCCCT...CAAGGATGAGGCCCCAGCATGGAGGATTGGGGGTAGAATTCCACCCTTGAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCTCCCTATGCAGTCGGAGCCCTaGAATACAGGTGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HGSGSVAVSKHSRLLWLPMQSEP*NTGACW
Trigger: CCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCAT...AGGGAGCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GTGGCCTGCTGGCGTATCCACTGTGGCATTCTTTGTGGCACCAAGTCTTCACCTGGAGCCCCTGCCACATaGAGTCGGAGCCCTGCAATA +
Preference number: 4 (lower is better)
Translates to: VACWRIHCGILCGTKSSPGAPAT*SRSPAI
Trigger: TATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCC...AGGTGAAGACTTGGTGCCACAAAGAATGCCACAGTGGATACGCCAGCAGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR GCA 90 bp CCAGACCTCCATGGCAAAAGGGCTACCACTGGAAAGCAGCCGGTCCTCATAAACCCTCCCTCGAGCAGCTaGCCAGACAGCTTCCTAGGT +
Preference number: 4 (lower is better)
Translates to: PDLHGKRATTGKQPVLINPPSSS*PDSFLG
Trigger: ACCTAGGAAGCTGTCTGGGCAGCTGCTCGAGGGAGG...GTTTATGAGGACCGGCTGCTTTCCAGTGGTAGCCCTTTTGCCATGGAGGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR GCA 90 bp CTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGCCTGGGATTCCCCAAGTCCACCCTaGACCACCCCACTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LGGVVWNHSFQPLHPAWDSPSPP*TTPLVS
Trigger: AGAGACCAGTGGGGTGGTGCAGGGTGGACTTGGGGA...ATCCCAGGCTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR GCA 90 bp CCCTCCACAGCTTGCCCTGATCACCAGGTACCCACAGTGGAAAGCAGCCCCTTGAGAGTGTGGCCCTCATaGTCCTACATGGGTGCACAA +
Preference number: 4 (lower is better)
Translates to: PSTACPDHQVPTVESSPLRVWPS*SYMGAQ
Trigger: TTGTGCACCCATGTAGGAGCATGAGGGCCACACTCT...CAAGGGGCTGCTTTCCACTGTGGGTACCTGGTGATCAGGGCAAGCTGTGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR GCA 90 bp CCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCAGCAGGTCTCTAAAGAGTAGGTaGCAGTCCTGGGACCACCCT +
Preference number: 4 (lower is better)
Translates to: PSEPTSPWTWLWRLRGSRSLKSR*QSWDHP
Trigger: AGGGTGGTCCCAGGACTGGCACCTACTCTTTAGAGA...CCTGCTGCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp TACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTTGAACACCACACACTaGCCTGTTTTTACACCGTGG +
Preference number: 4 (lower is better)
Translates to: YRCLLGSPSLHGSGSVAVLNTTH*PVFTPW
Trigger: CCACGGTGTAAAAACAGGCCAGTGTGTGGTGTTCAA...GACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000432930.5
CDS-3UTR CCA 90 bp CACCCCTGGCCCTCCACAGCTTGCCCTGATCACCAGGTACCCACAGTGGAAAGCATCTCACAGGTCCTGTaGGTCCCATTGAACACCACA +
Preference number: 4 (lower is better)
Translates to: HPWPSTACPDHQVPTVESISQVL*VPLNTT
Trigger: TGTGGTGTTCAATGGGACCCACAGGACCTGTGAGAT...GCTTTCCACTGTGGGTACCTGGTGATCAGGGCAAGCTGTGGAGGGCCAGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp AGCAGGGAACGGCTACAGGCTCCCGGAATGGGTTGGCAAGTGGGTGTCAGAACTGCTCCCGGAATGGGTTaGCAAGTGGGTGTCAGAACT +
Preference number: 4 (lower is better)
Translates to: SRERLQAPGMGWQVGVRTAPGMG*QVGVRT
Trigger: AGTTCTGACACCCACTTGCCAACCCATTCCGGGAGC...AGTTCTGACACCCACTTGCCAACCCATTCCGGGAGCCTGTAGCCGTTCCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GAGGCAGCAGGGACCCCAGGCATTTTACTGAGGCTCCAGGTGGCAGGTGATTCTCCCAATCCTCCATGCTaGGGCCTCATCCTTGAGATC +
Preference number: 4 (lower is better)
Translates to: EAAGTPGILLRLQVAGDSPNPPC*GLILEI
Trigger: GATCTCAAGGATGAGGCCCCAGCATGGAGGATTGGG...AGAATCACCTGCCACCTGGAGCCTCAGTAAAATGCCTGGGGTCCCTGCTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TGCTGGCTTTACTCCGTGACTTTGTCCAGCCATGACATCAGCTTCCTCTGGGCCAGCACCCTACCAAGGTaGGAGTCAGGGGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: CWLYSVTLSSHDISFLWASTLPR*ESGEGL
Trigger: CAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCT...GGCCCAGAGGAAGCTGATGTCATGGCTGGACAAAGTCACGGAGTAAAGCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CTGCTCTCTCTCCCAGACCTCCATGGCAAAAGGGCTACCACTGGAAAGCAGCCGTCTACCTTGCCTTTTTaGCTCCAGCTGCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: LLSLPDLHGKRATTGKQPSTLPF*LQLHSP
Trigger: GGGGCTGTGCAGCTGGAGCCAAAAAGGCAAGGTAGA...CGGCTGCTTTCCAGTGGTAGCCCTTTTGCCATGGAGGTCTGGGAGAGAGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CCA 90 bp TGGCCTGCTGGCGTATCCACTGTGGCATTCTTTGTGGCACCAAGTCTTCACCTGTGCTCCGCCCTTGCCTaGGGGATAGGGAGGTGGATT +
Preference number: 4 (lower is better)
Translates to: WPAGVSTVAFFVAPSLHLCSALA*GIGRWI
Trigger: AATCCACCTCCCTATCCCCCAGGCAAGGGCGGAGCA...CAGGTGAAGACTTGGTGCCACAAAGAATGCCACAGTGGATACGCCAGCAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp ACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCTCCCTGACCAGGTACCCACAGTaGAAAGCAGCCCCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: TGQVLSPSQNTADFYGSLTRYPQ*KAAPCL
Trigger: GAGGCAAGGGGCTGCTTTCCACTGTGGGTACCTGGT...CAGGGAGCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp AGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTTCATACACAGGAAGAGGGTaGCTTTGCTGGCTTTACTCC +
Preference number: 4 (lower is better)
Translates to: RQHPTKVGVRGGTVCWGSYTGRG*LCWLYS
Trigger: GGAGTAAAGCCAGCAAAGCCACCCTCTTCCTGTGTA...TGAACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp AGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTTCACTGGCGTATCCACTGTaGCATTCTTTGTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: RQHPTKVGVRGGTVCWGSLAYPL*HSLWHQ
Trigger: TTGGTGCCACAAAGAATGCCACAGTGGATACGCCAG...TGAACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp CTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGCCTGGGATTCAGCTCCAGCTACCTaGGCAGTTGTGGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LGGVVWNHSFQPLHPAWDSAPAT*AVVVGW
Trigger: CCACCCCACCACAACTGCCCAGGTAGCTGGAGCTGA...ATCCCAGGCTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp TGTGAAGTTCTGGGCCTGGGCCAGCAGGGGCCTCGAGGGCACAACGCCACTCTCTTGAACACCACACACTaGCCTGTTTTTACACCTCTG +
Preference number: 4 (lower is better)
Translates to: CEVLGLGQQGPRGHNATLLNTTH*PVFTPL
Trigger: CAGAGGTGTAAAAACAGGCCAGTGTGTGGTGTTCAA...GAGAGTGGCGTTGTGCCCTCGAGGCCCCTGCTGGCCCAGGCCCAGAACTTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452228.5
CDS-3UTR TCA 90 bp TTCCAGCTGCAAAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGACGGGACAGTAGGGGCTaGATTGTGGTTCATAGCGGC +
Preference number: 4 (lower is better)
Translates to: FQLQNLASLREISVVLFGRDSRG*IVVHSG
Trigger: GCCGCTATGAACCACAATTCAGCCCCTACTGTCCCG...TCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTTGCAGCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp TTCCTCTGGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGAGGTCACAATCCCAGTaGACTCTGATGCCTACAGAG +
Preference number: 4 (lower is better)
Translates to: FLWAPRRIRCTCPSLDTQRSQSQ*TLMPTE
Trigger: CTCTGTAGGCATCAGAGTTCACTGGGATTGTGACCT...CTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCCAGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp TGTGGCATTCTTTGTGGCACCAAGTCTTCACCTGCCCCAGGGAACCAGGCAATTTGGGGTCTCTACCTATaGTGGGGGTGCAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: CGILCGTKSSPAPGNQAIWGLYL*WGCRWG
Trigger: CCCCCATCTGCACCCCCATCATAGGTAGAGACCCCA...AATTGCCTGGTTCCCTGGGGCAGGTGAAGACTTGGTGCCACAAAGAATGCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR TCA 90 bp AAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCGCAAGGAGGGTTCCATaGCAGGCATGGGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: KPGQPEGDLGGVVWNHSFARRVP*QAWGQA
Trigger: AGCCTGACCCCATGCCTGTCATGGAACCCTCCTTGC...GAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR GCA 90 bp AAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCCCACGAGGTCCCCAATaGGGAACACGGGACAGTAGG +
Preference number: 4 (lower is better)
Translates to: KPGQPEGDLGGVVWNHSFPRGPQ*GTRDSR
Trigger: CCTACTGTCCCGTGTTCCGCATTGGGGACCTCGTGG...GAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCAGAATCAGGTGCACGTaGCCCTCCTTGGATACCCAG +
Preference number: 4 (lower is better)
Translates to: VSTGQVLSPSQNTADFYGRIRCT*PSLDTQ
Trigger: CTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCT...GCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GGGTTCAAGGGTGGAATTCTACCCCCAATCCTCCATGCTGGGGCCTCATCCTTGAGAATCAGGTGCACGTaGCCCTCCTTGGATACCCAG +
Preference number: 4 (lower is better)
Translates to: GFKGGILPPILHAGASSLRIRCT*PSLDTQ
Trigger: CTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCT...CAAGGATGAGGCCCCAGCATGGAGGATTGGGGGTAGAATTCCACCCTTGAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCCCAAGGAGAATCAGGTaGACGTGCCCCTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: VSTGQVLSPSQNTADFYGPRRIR*TCPSLD
Trigger: ATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGG...GCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CTCCACACAGAGTTGGCGGTTGCTTTCGGGGCCTTGGCCTCCTCATACTTTGTCCCAAGGAGAATCAGGTaGACGTGCCCCTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: LHTELAVAFGALASSYFVPRRIR*TCPSLD
Trigger: ATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGG...GACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp TGGGGTGGACACTTAGAATTCCCTGCCCCGCCCTGGGACCAAGAGGAGAATTCCGGAAGAGGGTGGCTTTaGTGGCTTTACTCCGTGACT +
Preference number: 4 (lower is better)
Translates to: WGGHLEFPAPPWDQEENSGRGWL*WLYSVT
Trigger: AGTCACGGAGTAAAGCCAGCAAAGCCACCCTCTTCC...GGAATTCTCCTCTTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGTCCACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp CGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCAGCTTGAACACCACACACTaGCCTGTTTTTACACCGTGG +
Preference number: 4 (lower is better)
Translates to: RPSEPTSPWTWLWRLRGSLNTTH*PVFTPW
Trigger: CCACGGTGTAAAAACAGGCCAGTGTGTGGTGTTCAA...GCTGCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000432930.5
CDS-3UTR CCA 90 bp TCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATATCTCACAGGTCCTGTaGGTCCCATTGAACACCACA +
Preference number: 4 (lower is better)
Translates to: SPTFALQSPPPHGHGSGDISQVL*VPLNTT
Trigger: TGTGGTGTTCAATGGGACCCACAGGACCTGTGAGAT...ATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp ACATCAGCTTCCTCTGGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATCTCACAGGTCCTGTaGGTCCCATTGAACACCACA +
Preference number: 4 (lower is better)
Translates to: TSASSGPQGESGARAPPWISQVL*VPLNTT
Trigger: TGTGGTGTTCAATGGGACCCACAGGACCTGTGAGAT...CCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCCAGAGGAAGCTGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGCCTGGGATTGGACAGGGCCATCCTaGTGTCTGTGTCTGACTCCC +
Preference number: 4 (lower is better)
Translates to: LGGVVWNHSFQPLHPAWDWTGPS*CLCLTP
Trigger: GGGAGTCAGACACAGACACCAGGATGGCCCTGTCCA...ATCCCAGGCTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCTCCCTTACAGGCTCCCGGAATaGGTTGGCAAGTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: HGSGSVAVSKHSRLLWLPYRLPE*VGKWVS
Trigger: TGACACCCACTTGCCAACCCATTCCGGGAGCCTGTA...AGGGAGCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGACCAGGTACCCACAGTaGAAAGCAGCCCCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: QSPRVRFCRRLKTQPTSMTRYPQ*KAAPCL
Trigger: GAGGCAAGGGGCTGCTTTCCACTGTGGGTACCTGGT...CATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CACCCCTGGCCCTCCACAGCTTGCCCTGATCACCAGGTACCCACAGTGGAAAGCCCACATCAAAGATGCTaGGGCTCTCTAAAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: HPWPSTACPDHQVPTVESPHQRC*GSLKSR
Trigger: CCTACTCTTTAGAGAGCCCCAGCATCTTTGATGTGG...GCTTTCCACTGTGGGTACCTGGTGATCAGGGCAAGCTGTGGAGGGCCAGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp CTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCCTGTGGCATTCTTTGTaGCACCAAGTCTTCACCTGC +
Preference number: 4 (lower is better)
Translates to: LRPSEPTSPWTWLWRLRGLWHSL*HQVFTC
Trigger: GCAGGTGAAGACTTGGTGCCACAAAGAATGCCACAG...GCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR TCA 90 bp GAGGCAGCAGGGACCCCAGGCATTTTACTGAGGCTCCAGGTGGCAGGTGATTCTAGGTCACAATCCCAGTaGACTCTGATGCCTACAGAG +
Preference number: 4 (lower is better)
Translates to: EAAGTPGILLRLQVAGDSRSQSQ*TLMPTE
Trigger: CTCTGTAGGCATCAGAGTTCACTGGGATTGTGACCT...AGAATCACCTGCCACCTGGAGCCTCAGTAAAATGCCTGGGGTCCCTGCTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp AAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCGGTTGCTCCCACCAGTaGGTGGCTGTCCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: KPGQPEGDLGGVVWNHSFGCSHQ*VAVLKL
Trigger: CAACTTCAGGACAGCCACTCACTGGTGGGAGCAACC...GAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp ACATACAGCAGTAGCAGGTCACAGAAAAAGGTGACCACGCCCAGCCAAGCTGCCGACTTTGTCCAGCCATaGCATCAGCTTCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: TYSSSRSQKKVTTPSQAADFVQP*HQLPLG
Trigger: GCCCAGAGGAAGCTGATGTCATGGCTGGACAAAGTC...GGCAGCTTGGCTGGGCGTGGTCACCTTTTTCTGTGACCTGCTACTGCTGTATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp GGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCAGCTGGCTTTACTCCGTaGCTTTGTCCAGCCATGACA +
Preference number: 4 (lower is better)
Translates to: GQPEGDLGGVVWNHSFQPAGFTP*LCPAMT
Trigger: TGTCATGGCTGGACAAAGTCACGGAGTAAAGCCAGC...TGGCTGGAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp GTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCGCCTGTTTTTACACCTaGGGTGGCTTCACGAAGTCG +
Preference number: 4 (lower is better)
Translates to: VSTGQVLSPSQNTADFYGACFYT*GGFTKS
Trigger: CGACTTCGTGAAGCCACCTCAGGTGTAAAAACAGGC...GCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422210.5
ENST00000442475.5
CDS-3UTR GCA 90 bp AAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCTGCAATACAGGTGCCTaGTGGGCTCTCCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: KPGQPEGDLGGVVWNHSFCNTGA*WALPVS
Trigger: GGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCA...GAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GGTGGTGTTGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGCCTGGGATCAGCTTTTTGGCTCCAGCTaGACAGCCCCATGTAGGACC +
Preference number: 4 (lower is better)
Translates to: GGVVWNHSFQPLHPAWDQLFGSS*TAPCRT
Trigger: GGTCCTACATGGGGCTGTGCAGCTGGAGCCAAAAAG...CTGATCCCAGGCTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR GCA 90 bp CTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGCCTGGGATACACTTAGAATTCCCTaGCCCGCCCTGGGACCAAGA +
Preference number: 4 (lower is better)
Translates to: LGGVVWNHSFQPLHPAWDTLRIP*PALGPR
Trigger: TCTTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGT...ATCCCAGGCTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp GGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGAATCCACATCAAAGATaGTGGGGCTCTCTAAAGAGT +
Preference number: 4 (lower is better)
Translates to: GPQGESGARAPPWIPRPQNPHQR*WGSLKS
Trigger: ACTCTTTAGAGAGCCCCAGCATCTTTGATGTGGATT...CTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp CTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGCCTGGGATCCTGTTTTTACACCGTaGCTGTGTGTGCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LGGVVWNHSFQPLHPAWDPVFTP*LCVPPS
Trigger: GGAGGGAGGCACACACAGCCACGGTGTAAAAACAGG...ATCCCAGGCTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000432930.5
CDS-3UTR CCA 90 bp CTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCTTGAACACCACACACTaGCCTGTTTTTACACCGTGG +
Preference number: 4 (lower is better)
Translates to: LGSPSLHGSGSVAVSKHSLNTTH*PVFTPW
Trigger: CCACGGTGTAAAAACAGGCCAGTGTGTGGTGTTCAA...GCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000432930.5
CDS-3UTR CCA 90 bp GAGGCAGCAGGGACCCCAGGCATTTTACTGAGGCTCCAGGTGGCAGGTGATTCTATCTCACAGGTCCTGTaGGTCCCATTGAACACCACA +
Preference number: 4 (lower is better)
Translates to: EAAGTPGILLRLQVAGDSISQVL*VPLNTT
Trigger: TGTGGTGTTCAATGGGACCCACAGGACCTGTGAGAT...AGAATCACCTGCCACCTGGAGCCTCAGTAAAATGCCTGGGGTCCCTGCTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCTCCCTTTGCTTTCGGGGCCTTaGCCTCCTCATACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: HGSGSVAVSKHSRLLWLPLLSGP*PPHTLS
Trigger: GGACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAA...AGGGAGCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCTTGCTTTCGGGGCCTTaGCCTCCTCATACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: VSTGQVLSPSQNTADFYGLLSGP*PPHTLS
Trigger: GGACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAA...GCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp ACAGGCTCCCGGAATGGGTTGGCAAGTGGGTGTCAGAACTTGGACAGGGCCATCGAATGGGTTGGCAAGTaGGTGTCAGAACTTGGACAG +
Preference number: 4 (lower is better)
Translates to: TGSRNGLASGCQNLDRAIEWVGK*VSELGQ
Trigger: CTGTCCAAGTTCTGACACCCACTTGCCAACCCATTC...GATGGCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCCGGGAGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp AGCCATGTGGCCTGCTGGCGTATCCACTGTGGCATTCTTTGTGGCACCAAGTCTGCTCCCGGAATGGGTTaGCAAGTGGGTGTCAGAACT +
Preference number: 4 (lower is better)
Translates to: SHVACWRIHCGILCGTKSAPGMG*QVGVRT
Trigger: AGTTCTGACACCCACTTGCCAACCCATTCCGGGAGC...AGACTTGGTGCCACAAAGAATGCCACAGTGGATACGCCAGCAGGCCACATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp TCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTGCTGGGGTTCAAGGGTaGAATTCTACCCCCAATCCT +
Preference number: 4 (lower is better)
Translates to: SQSPRVRFCRRLKTQPTSAGVQG*NSTPNP
Trigger: AGGATTGGGGGTAGAATTCCACCCTTGAACCCCAGC...AGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGGAGGGACTGTCTGCTaGGGTTCAAGGGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: QSPRVRFCRRLKTQPTSMGGTVC*GSRVEF
Trigger: GAATTCCACCCTTGAACCCCAGCAGACAGTCCCTCC...CATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp TCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTCAAAAGGGCTACCACTaGAAAGCAGCCGGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SQSPRVRFCRRLKTQPTSQKGYH*KAAGPH
Trigger: ATGAGGACCGGCTGCTTTCCAGTGGTAGCCCTTTTG...AGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CCA 90 bp TCGAGCAGCTGCCCAGACAGCTTCCTAGGTATGACTTGGACTGAAGTGAATTTCCCACTCCATCCAGCCTaGGATCAGAGCCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SSSCPDSFLGMTWTEVNFPLHPA*DQSQGL
Trigger: GAGGCCCTGGCTCTGATCCCAGGCTGGATGGAGTGG...GAAATTCACTTCAGTCCAAGTCATACCTAGGAAGCTGTCTGGGCAGCTGCTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CCA 90 bp CTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGCCTGGGATAGCCCCTTGCCTCCCTaGGGTGGACACTTAGAATTC +
Preference number: 4 (lower is better)
Translates to: LGGVVWNHSFQPLHPAWDSPLPP*GGHLEF
Trigger: GAATTCTAAGTGTCCACCCCAGGGAGGCAAGGGGCT...ATCCCAGGCTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CGGTTGCTTTCGGGGCCTTGGCCTCCTCATACTTTGTCCTCCAGTAGAAATGGGCCATGGACATGGCTCTaGAGATTGAGAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RLLSGPWPPHTLSSSRNGPWTWL*RLRGSR
Trigger: CCTGCTGCCTCTCAATCTCCAGAGCCATGTCCATGG...CCCATTTCTACTGGAGGACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCAGCTTGAACACCACACACTaGCCTGTTTTTACACCTGAG +
Preference number: 4 (lower is better)
Translates to: RPSEPTSPWTWLWRLRGSLNTTH*PVFTPE
Trigger: CTCAGGTGTAAAAACAGGCCAGTGTGTGGTGTTCAA...GCTGCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422210.5
ENST00000442475.5
3UTR CAA 72 bp CAAAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTaGTTTGGAACCATTCCTTCCAGCCACTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: QNLASLREISVV*FGTIPSSHSIQ
Trigger: CTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CAA 72 bp GCACCAAGTCTTCACCTGCCCCAGGGAACCAGGCAATaGTCTCCAATCCACATCAAAGATGCTGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: APSLHLPQGTRQ*SPIHIKDAGAL
Trigger: GAGAGCCCCAGCATCTTTGATGTGGATTGGAGACAATTGCCTGGTTCCCTGGGGCAGGTGAAGACTTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR TCA 90 bp GGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCAAGGTCACAATCCCAGTaGACTCTGATGCCTACAGAG +
Preference number: 4 (lower is better)
Translates to: GQPEGDLGGVVWNHSFQPRSQSQ*TLMPTE
Trigger: CTCTGTAGGCATCAGAGTTCACTGGGATTGTGACCT...TGGCTGGAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp AGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAGGTATGACTTGGACTaGAGTGAATTTCAGATGTAC +
Preference number: 4 (lower is better)
Translates to: RCLLGSPSLHGSGSVAVSRYDLD*SEFQMY
Trigger: GTACATCTGAAATTCACTTCAGTCCAAGTCATACCT...TGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR GCA 90 bp GAGGCAGCAGGGACCCCAGGCATTTTACTGAGGCTCCAGGTGGCAGGTGATTCTGTCTCTTCATGGCTGTaGCATGTCTACCATAGATGC +
Preference number: 4 (lower is better)
Translates to: EAAGTPGILLRLQVAGDSVSSWL*HVYHRC
Trigger: GCATCTATGGTAGACATGGCACAGCCATGAAGAGAC...AGAATCACCTGCCACCTGGAGCCTCAGTAAAATGCCTGGGGTCCCTGCTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp GGAATGGGTTGGCAAGTGGGTGTCAGAACTTGGACAGGGCCATCCTGGTGTCTGGTAGGGGCTGAATTGTaGTTCATAGCGGCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: GMGWQVGVRTWTGPSWCLVGAEL*FIAAVL
Trigger: AAGCACTGCCGCTATGAACCACAATTCAGCCCCTAC...CAGACACCAGGATGGCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp ACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCTCCCTGGAATGGGTTGGCAAGTaGGTGTCAGAACTTGGACAG +
Preference number: 4 (lower is better)
Translates to: TGQVLSPSQNTADFYGSLEWVGK*VSELGQ
Trigger: CTGTCCAAGTTCTGACACCCACTTGCCAACCCATTC...CAGGGAGCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CTCCACACAGAGTTGGCGGTTGCTTTCGGGGCCTTGGCCTCCTCATACTTTGTCGAATGGGTTGGCAAGTaGGTGTCAGAACTTGGACAG +
Preference number: 4 (lower is better)
Translates to: LHTELAVAFGALASSYFVEWVGK*VSELGQ
Trigger: CTGTCCAAGTTCTGACACCCACTTGCCAACCCATTC...GACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CTGCAAAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCCAATCCTCCATGCTaGGGCCTCATCCTTGAGATC +
Preference number: 4 (lower is better)
Translates to: LQNLASLREISVVLFGTIPNPPC*GLILEI
Trigger: GATCTCAAGGATGAGGCCCCAGCATGGAGGATTGGG...AATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp AGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGGGCTCTCAGGAAGCCTaGAGGAAAGATTCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: REISVVLFGTIPSSHSIQGSQEA*RKDSKG
Trigger: CCCCTTGGAATCTTTCCTCCAGGCTTCCTGAGAGCC...CTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CCA 90 bp AGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGCCATGGACATGGCTCTaGAGATTGAGAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: REISVVLFGTIPSSHSIQPWTWL*RLRGSR
Trigger: CCTGCTGCCTCTCAATCTCCAGAGCCATGTCCATGG...CTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp GTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCAGAGGGTGGCTTTGCTaGCTTTACTCCGTGACTTTG +
Preference number: 4 (lower is better)
Translates to: VSTGQVLSPSQNTADFYGRGWLC*LYSVTL
Trigger: CAAAGTCACGGAGTAAAGCCAGCAAAGCCACCCTCT...GCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp TCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTGAGGTGAAAAGAGTGTaGCCCTCATGCTCCTACATG +
Preference number: 4 (lower is better)
Translates to: SQSPRVRFCRRLKTQPTSEVKRV*PSCSYM
Trigger: CATGTAGGAGCATGAGGGCCACACTCTTTTCACCTC...AGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp TCGAGCAGCTGCCCAGACAGCTTCCTAGGTATGACTTGGACTGAAGTGAATTTCGGACACAGGTGGGCCTaGATCCAGGTGCCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: SSSCPDSFLGMTWTEVNFGHRWA*IQVPSE
Trigger: TTCACTGGGCACCTGGATCCAGGCCCACCTGTGTCC...GAAATTCACTTCAGTCCAAGTCATACCTAGGAAGCTGTCTGGGCAGCTGCTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR TCA 90 bp AAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCAATCCCAGTGAACTCTaGTGCCTACAGAGCCACCCA +
Preference number: 4 (lower is better)
Translates to: KPGQPEGDLGGVVWNHSFNPSEL*CLQSHP
Trigger: TGGGTGGCTCTGTAGGCATCAGAGTTCACTGGGATT...GAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR TCA 90 bp TATGGCTCCCTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCAGGTATGACTTGGACTaGAGTGAATTTCAGATGTAC +
Preference number: 4 (lower is better)
Translates to: YGSLRQHPTKVGVRGGTVRYDLD*SEFQMY
Trigger: GTACATCTGAAATTCACTTCAGTCCAAGTCATACCT...GACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAGGGAGCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CCA 90 bp CATACTTTGTCCTCCAGTAGAAATGGGCTTCTCTATCCACATACAGCAGTAGCACAGCAGCAGTGGCCGTaGGTGCAGGTGCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: HTLSSSRNGLLYPHTAVAQQQWP*VQVLSS
Trigger: GGAGCTCAGCACCTGCACCCACGGCCACTGCTGCTG...TGCTACTGCTGTATGTGGATAGAGAAGCCCATTTCTACTGGAGGACAAAGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGAATGGGTTGGCAAGTaGGTGTCAGAACTTGGACAG +
Preference number: 4 (lower is better)
Translates to: QSPRVRFCRRLKTQPTSMEWVGK*VSELGQ
Trigger: CTGTCCAAGTTCTGACACCCACTTGCCAACCCATTC...CATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGCCTGGGATCATGTCTACCATAGATaGCCCCCAACTTTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: LGGVVWNHSFQPLHPAWDHVYHR*PPTFQS
Trigger: TGACTGGAAAGTTGGGGGGCATCTATGGTAGACATG...ATCCCAGGCTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp AAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCGTAGGGGCTGAATTGTaGTTCATAGCGGCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: KPGQPEGDLGGVVWNHSFVGAEL*FIAAVL
Trigger: AAGCACTGCCGCTATGAACCACAATTCAGCCCCTAC...GAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CCATGGCAAAAGGGCTACCACTGGAAAGCAGCCGGTCCTCATAAACTAAGCAGGGTAGGGGCTGAATTGTaGTTCATAGCGGCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: PWQKGYHWKAAGPHKLSRVGAEL*FIAAVL
Trigger: AAGCACTGCCGCTATGAACCACAATTCAGCCCCTAC...CCTGCTTAGTTTATGAGGACCGGCTGCTTTCCAGTGGTAGCCCTTTTGCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CCA 90 bp CTCCACACAGAGTTGGCGGTTGCTTTCGGGGCCTTGGCCTCCTCATACTTTGTCTTGAACACCACACACTaGCCTGTTTTTACACCTGAG +
Preference number: 4 (lower is better)
Translates to: LHTELAVAFGALASSYFVLNTTH*PVFTPE
Trigger: CTCAGGTGTAAAAACAGGCCAGTGTGTGGTGTTCAA...GACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422210.5
ENST00000442475.5
CDS-3UTR GCA 90 bp CATACTTTGTCCTCCAGTAGAAATGGGCTTCTCTATCCACATACAGCAGTAGCAGGAGCCCCTGCCACATaGAGTCGGAGCCCTGCAATA +
Preference number: 4 (lower is better)
Translates to: HTLSSSRNGLLYPHTAVAGAPAT*SRSPAI
Trigger: TATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCC...TGCTACTGCTGTATGTGGATAGAGAAGCCCATTTCTACTGGAGGACAAAGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CCA 90 bp CCCTCCACAGCTTGCCCTGATCACCAGGTACCCACAGTGGAAAGCAGCCCCTTGTTCCTAGGTATGACTTaGACTGAAGTGAATTTCAGA +
Preference number: 4 (lower is better)
Translates to: PSTACPDHQVPTVESSPLFLGMT*TEVNFR
Trigger: TCTGAAATTCACTTCAGTCCAAGTCATACCTAGGAA...CAAGGGGCTGCTTTCCACTGTGGGTACCTGGTGATCAGGGCAAGCTGTGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CCA 90 bp GGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCAATAATAATAATTGCTTaGCCAGCCATGTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GQPEGDLGGVVWNHSFQPIIIIA*PAMWPA
Trigger: AGCAGGCCACATGGCTGGCCAAGCAATTATTATTAT...TGGCTGGAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp TCCAAGGCATTGGACTTAGAGAAGTTGAACTTGCTGAAGGTGACTGTGTTTTTGGACGGACGGGTGCTCTaGGCATCTGCCCTGAACTTG +
Preference number: 4 (lower is better)
Translates to: SKALDLEKLNLLKVTVFLDGRVL*ASALNL
Trigger: CAAGTTCAGGGCAGATGCCCAGAGCACCCGTCCGTC...CAAAAACACAGTCACCTTCAGCAAGTTCAACTTCTCTAAGTCCAATGCCTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432930.5
CDS-3UTR CCA 90 bp GTGCACAAGTGCCCAGGCCTGTTCCAGTTACCTTCTAGCCCACCTGGTAGCTGCTTCCTAGGTATGACTTaGACTGAAGTGAATTTCAGA +
Preference number: 4 (lower is better)
Translates to: VHKCPGLFQLPSSPPGSCFLGMT*TEVNFR
Trigger: TCTGAAATTCACTTCAGTCCAAGTCATACCTAGGAA...GCAGCTACCAGGTGGGCTAGAAGGTAACTGGAACAGGCCTGGGCACTTGTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CCA 90 bp TTGGACTTAGAGAAGTTGAACTTGCTGAAGGTGACTGTGTTTTTGATGAACAGTGCTCCCGGAATGGGTTaGCAAGTGGGTGTCAGAACT +
Preference number: 4 (lower is better)
Translates to: LDLEKLNLLKVTVFLMNSAPGMG*QVGVRT
Trigger: AGTTCTGACACCCACTTGCCAACCCATTCCGGGAGC...ACTGTTCATCAAAAACACAGTCACCTTCAGCAAGTTCAACTTCTCTAAGTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
3UTR CAA 72 bp CAGGTCTCCAAGGCATTGGACTTAGAGAAGTTGAACTaGCTGAAGGTGACTGTGTTTTTGATGAACAGTGTG +
Preference number: 4 (lower is better)
Translates to: QVSKALDLEKLN*LKVTVFLMNSV
Trigger: CACACTGTTCATCAAAAACACAGTCACCTTCAGCAAGTTCAACTTCTCTAAGTCCAATGCCTTGGAGACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp GGTGCCCAGTGTGACGGCCGTGGGGATGAGCCCGAACTTCCCTGCCTGCCCGGTCTCGGCCAGTCGGGCTaGGGATGCAAGGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: GAQCDGRGDEPELPCLPGLGQSG*GCKGQL
Trigger: GAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGAG...ACCGGGCAGGCAGGGAAGTTCGGGCTCATCCCCACGGCCGTCACACTGGGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS GCA 90 bp CCTGCAGGTGCCCACAGTGCTCGCACTCACCACGCCCAGCCAAGCTaGCCCGGTGCCCAGTGTGACGGCCGTGGGGATGAGCCCGAACTT +
Preference number: 5 (lower is better)
Translates to: PAGAHSARTHHAQPS*PGAQCDGRGDEPEL
Trigger: AAGTTCGGGCTCATCCCCACGGCCGTCACACTGGGCACCGGGGCAGCTTGGCTGGGCGTGGTGAGTGCGAGCACTGTGGGCACCTGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487342.1
CDS GCA 90 bp AGGCAGGACCAGGATGGGAGGGCCTGGACACCTCATGGGAACTGCTaGTGCCCAGAGCTCGGGGTCCTGTCACCCACAGGCCTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: RQDQDGRAWTPHGNC*CPELGVLSPTGLEA
Trigger: GGCCTCCAGGCCTGTGGGTGACAGGACCCCGAGCTCTGGGCAGCAGCAGTTCCCATGAGGTGTCCAGGCCCTCCCATCCTGGTCCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469722.2
CDS-3UTR CAA 90 bp CAGGCCTCAGGGGCCCTGCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATCCCTCCACACAGAGTaGGCGGTTGCTTTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: QASGALLSHLRPSEPTSPSLHTE*AVAFGA
Trigger: GGCCCCGAAAGCAACCGCCAACTCTGTGTGGAGGGA...TGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGCAGGGCCCCTGAGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp CTGAGGCACTCGGCCAGTCGGGCTTGGGATGCAAGGGCCAGCTCCCTCCACACACTCGGCCAGTCGGGCTaGGGATGCAAGGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LRHSASRAWDARASSLHTLGQSG*GCKGQL
Trigger: GAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGAG...TGTGTGGAGGGAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGAGTGCCTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS GCA 90 bp CAGAGGCAGGACCAGGATGGGAGGGCCTGGACACCTCATGGGAACTaGTGCTGCCCAGAGCTCGGGGTCCTGTCACCCACAGGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: QRQDQDGRAWTPHGN*CCPELGVLSPTGLE
Trigger: CTCCAGGCCTGTGGGTGACAGGACCCCGAGCTCTGGGCAGCAGCAGTTCCCATGAGGTGTCCAGGCCCTCCCATCCTGGTCCTGCCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469722.2
CDS GCA 90 bp GCATTGGACACACCCTGGTCAGCAGCACTCACTGCAGCCTGCAGGTaGCCACAGTGCTCGCACTCACCACGCCCAGCCAAGCTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: ALDTPWSAALTAACR*PQCSHSPRPAKLPR
Trigger: CCGGGGCAGCTTGGCTGGGCGTGGTGAGTGCGAGCACTGTGGGCACCTGCAGGCTGCAGTGAGTGCTGCTGACCAGGGTGTGTCCAATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487342.1
CDS-3UTR CAA 90 bp GTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGCCTCCACACCCGGTaGCTCCCACCAGTGAGTGGC +
Preference number: 5 (lower is better)
Translates to: VGALQYRCLLGSPSLHGSGLHTR*LPPVSG
Trigger: GCCACTCACTGGTGGGAGCAACCGGGTGTGGAGGCC...TGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp AGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCCTCGGCCAGTCGGGCTaGGGATGCAAGGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: SRSPAIQVPAGLSQSPRVLGQSG*GCKGQL
Trigger: GAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGAG...GACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS GCA 90 bp CAGGACCAGGATGGGAGGGCCTGGACACCTCATGGGAACTGCTGCTaGCCAGAGCTCGGGGTCCTGTCACCCACAGGCCTGGAGGCCTTA +
Preference number: 5 (lower is better)
Translates to: QDQDGRAWTPHGNCC*PELGVLSPTGLEAL
Trigger: TAAGGCCTCCAGGCCTGTGGGTGACAGGACCCCGAGCTCTGGGCAGCAGCAGTTCCCATGAGGTGTCCAGGCCCTCCCATCCTGGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469722.2
CDS CCA 90 bp GAGTACCCAGAGGCAGGACCAGGATGGGAGGGCCTGGACACCTCATaGGAACTGCTGCTGCCCAGAGCTCGGGGTCCTGTCACCCACAGG +
Preference number: 5 (lower is better)
Translates to: EYPEAGPGWEGLDTS*ELLLPRARGPVTHR
Trigger: CCTGTGGGTGACAGGACCCCGAGCTCTGGGCAGCAGCAGTTCCCATGAGGTGTCCAGGCCCTCCCATCCTGGTCCTGCCTCTGGGTACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469722.2
CDS-3UTR CAA 90 bp CAGGGGCCCTGCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATAAGGTCCCTCCAGCCTaGGCCACGAGGTCCCCAATG +
Preference number: 5 (lower is better)
Translates to: QGPCSPTFALQSPPPHGHKVPPA*ATRSPM
Trigger: CATTGGGGACCTCGTGGCCAAGGCTGGAGGGACCTT...ATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGCAGGGCCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp GGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTTCAAGGCCTCCACACCCGGTaGCTCCCACCAGTGAGTGGC +
Preference number: 5 (lower is better)
Translates to: GSTLPRWESGEGLSAGVQGLHTR*LPPVSG
Trigger: GCCACTCACTGGTGGGAGCAACCGGGTGTGGAGGCC...TTGAACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TTGCCTCCCTGGGGTGGACACTTAGAATTCCCTGCCCCGCCCTGGGACCAAGAGGGCCTCCACACCCGGTaGCTCCCACCAGTGAGTGGC +
Preference number: 5 (lower is better)
Translates to: LPPWGGHLEFPAPPWDQEGLHTR*LPPVSG
Trigger: GCCACTCACTGGTGGGAGCAACCGGGTGTGGAGGCC...CTCTTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGTCCACCCCAGGGAGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp CCCTGGCCCTCCACAGCTTGCCCTGATCACCAGGTACCCACAGTGGAAAGCAGCGGCCTCCACACCCGGTaGCTCCCACCAGTGAGTGGC +
Preference number: 5 (lower is better)
Translates to: PWPSTACPDHQVPTVESSGLHTR*LPPVSG
Trigger: GCCACTCACTGGTGGGAGCAACCGGGTGTGGAGGCC...GCTGCTTTCCACTGTGGGTACCTGGTGATCAGGGCAAGCTGTGGAGGGCCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp CACCCCTGGCCCTCCACAGCTTGCCCTGATCACCAGGTACCCACAGTGGAAAGCTCCAGGGAGCAGAGCTaGGGCCCCAAGGAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: HPWPSTACPDHQVPTVESSREQS*GPKEAA
Trigger: GGCAGCCTCCTTGGGGCCCAAGCTCTGCTCCCTGGA...GCTTTCCACTGTGGGTACCTGGTGATCAGGGCAAGCTGTGGAGGGCCAGGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS GCA 90 bp GAGGCTCCAGCATGCATTGGACACACCCTGGTCAGCAGCACTCACTaGAGCCTGCAGGTGCCCACAGTGCTCGCACTCACCACGCCCAGC +
Preference number: 5 (lower is better)
Translates to: EAPACIGHTLVSSTH*SLQVPTVLALTTPS
Trigger: GCTGGGCGTGGTGAGTGCGAGCACTGTGGGCACCTGCAGGCTGCAGTGAGTGCTGCTGACCAGGGTGTGTCCAATGCATGCTGGAGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487342.1
CDS-3UTR CAA 90 bp TCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCCCTGCTCTCCCGTCCTGTGGGTCCCATaGAACACCACACACTGGCCT +
Preference number: 5 (lower is better)
Translates to: SGARAPPWIPRPQGPCSPVLWVP*NTTHWP
Trigger: AGGCCAGTGTGTGGTGTTCAATGGGACCCACAGGAC...GGGAGAGCAGGGCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp AGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAAGGTCCCTCCAGCCTaGGCCACGAGGTCCCCAATG +
Preference number: 5 (lower is better)
Translates to: SRSPAIQVPAGLSQSPRVKVPPA*ATRSPM
Trigger: CATTGGGGACCTCGTGGCCAAGGCTGGAGGGACCTT...GACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp CCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGAAGGTCCCTCCAGCCTaGGCCACGAGGTCCCCAATG +
Preference number: 5 (lower is better)
Translates to: PATCSRSPAIQVPAGLSQKVPPA*ATRSPM
Trigger: CATTGGGGACCTCGTGGCCAAGGCTGGAGGGACCTT...CTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp GCTCCCGGAATGGGTTGGCAAGTGGGTGTCAGAACTTGGACAGGGCCATCCTGGGGCCTCCACACCCGGTaGCTCCCACCAGTGAGTGGC +
Preference number: 5 (lower is better)
Translates to: APGMGWQVGVRTWTGPSWGLHTR*LPPVSG
Trigger: GCCACTCACTGGTGGGAGCAACCGGGTGTGGAGGCC...CCAGGATGGCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCCGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp GTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCATCCCTCCACACAGAGTaGGCGGTTGCTTTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: VGALQYRCLLGSPSLHGSSLHTE*AVAFGA
Trigger: GGCCCCGAAAGCAACCGCCAACTCTGTGTGGAGGGA...TGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp ACTGGGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCGGCTCCCGGAATGGGTaGGCAAGTGGGTGTCAGAAC +
Preference number: 5 (lower is better)
Translates to: TGDRALGERPPGPDAAGAGSRNG*ASGCQN
Trigger: GTTCTGACACCCACTTGCCAACCCATTCCGGGAGCC...GGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS GCA 90 bp CAGCATGCATTGGACACACCCTGGTCAGCAGCACTCACTGCAGCCTaGAGGTGCCCACAGTGCTCGCACTCACCACGCCCAGCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: QHALDTPWSAALTAA*RCPQCSHSPRPAKL
Trigger: CAGCTTGGCTGGGCGTGGTGAGTGCGAGCACTGTGGGCACCTGCAGGCTGCAGTGAGTGCTGCTGACCAGGGTGTGTCCAATGCATGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487342.1
CDS GCA 90 bp GCCTGCACCCCGAGACTCAATGTGCAGGCACCGGAGGCTCCAGCATaGATTGGACACACCCTGGTCAGCAGCACTCACTGCAGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: ACTPRLNVQAPEAPA*IGHTLVSSTHCSLQ
Trigger: CTGCAGGCTGCAGTGAGTGCTGCTGACCAGGGTGTGTCCAATGCATGCTGGAGCCTCCGGTGCCTGCACATTGAGTCTCGGGGTGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487342.1
CDS-3UTR CAA 90 bp AGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTTCAAAGGTCCCTCCAGCCTaGGCCACGAGGTCCCCAATG +
Preference number: 5 (lower is better)
Translates to: RQHPTKVGVRGGTVCWGSKVPPA*ATRSPM
Trigger: CATTGGGGACCTCGTGGCCAAGGCTGGAGGGACCTT...TGAACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TTGCCTCCCTGGGGTGGACACTTAGAATTCCCTGCCCCGCCCTGGGACCAAGAGAAGGTCCCTCCAGCCTaGGCCACGAGGTCCCCAATG +
Preference number: 5 (lower is better)
Translates to: LPPWGGHLEFPAPPWDQEKVPPA*ATRSPM
Trigger: CATTGGGGACCTCGTGGCCAAGGCTGGAGGGACCTT...CTCTTGGTCCCAGGGCGGGGCAGGGAATTCTAAGTGTCCACCCCAGGGAGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp CTGGGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCGTTGCTTTCGGGGCCTaGGCCTCCTCATACTTTGTC +
Preference number: 5 (lower is better)
Translates to: LGTEHWERDLQAQTQQEPVAFGA*ASSYFV
Trigger: GACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAAC...GGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGACACAGAGTTGGCGGTaGCTTTCGGGGCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: CSRSPAIQVPAGLSQSPRTQSWR*LSGPWP
Trigger: AGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGT...CCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TCGAAGGTCCCTCCAGCCTTGGCCACGAGGTCCCCAATGCGGAACACGGGACAGACACAGAGTTGGCGGTaGCTTTCGGGGCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: SKVPPALATRSPMRNTGQTQSWR*LSGPWP
Trigger: AGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGT...CTGTCCCGTGTTCCGCATTGGGGACCTCGTGGCCAAGGCTGGAGGGACCTTCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp ACTGGGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCAGTGGGTGTCAGAACTaGGACAGGGCCATCCTGGTG +
Preference number: 5 (lower is better)
Translates to: TGDRALGERPPGPDAAGASGCQN*DRAILV
Trigger: CACCAGGATGGCCCTGTCCAAGTTCTGACACCCACT...GGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp AGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAGGCTCCCGGAATGGGTaGGCAAGTGGGTGTCAGAAC +
Preference number: 5 (lower is better)
Translates to: RCLLGSPSLHGSGSVAVSGSRNG*ASGCQN
Trigger: GTTCTGACACCCACTTGCCAACCCATTCCGGGAGCC...TGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS CCA 90 bp ACCTCCCTGAGCATGTGCGCAGCTCTGGGTGTCACACTACCAACCTaGAGAGTACCCAGAGGCAGGACCAGGATGGGAGGGCCTGGACAC +
Preference number: 5 (lower is better)
Translates to: TSLSMCAALGVTLPT*RVPRGRTRMGGPGH
Trigger: GTGTCCAGGCCCTCCCATCCTGGTCCTGCCTCTGGGTACTCTCCAGGTTGGTAGTGTGACACCCAGAGCTGCGCACATGCTCAGGGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469722.2
CDS-3UTR CAA 90 bp TGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCCTGTGGGTCCCATaGAACACCACACACTGGCCT +
Preference number: 5 (lower is better)
Translates to: CSRSPAIQVPAGLSQSPRVLWVP*NTTHWP
Trigger: AGGCCAGTGTGTGGTGTTCAATGGGACCCACAGGAC...CCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp CTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTGTCCTGTGGGTCCCATaGAACACCACACACTGGCCT +
Preference number: 5 (lower is better)
Translates to: LRQHPTKVGVRGGTVCWGVLWVP*NTTHWP
Trigger: AGGCCAGTGTGTGGTGTTCAATGGGACCCACAGGAC...ACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTCCTGTGGGTCCCATaGAACACCACACACTGGCCT +
Preference number: 5 (lower is better)
Translates to: SEPCNTGACWALPVSTGQVLWVP*NTTHWP
Trigger: AGGCCAGTGTGTGGTGTTCAATGGGACCCACAGGAC...CTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp CGCCCTTGCCTGGGGGATAGGGAGGTGGATTATCTGCCTACTCCACCCCATTCCTCCCTCCACACAGAGTaGGCGGTTGCTTTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: RPCLGDREVDYLPTPPHSSLHTE*AVAFGA
Trigger: GGCCCCGAAAGCAACCGCCAACTCTGTGTGGAGGGA...GGAATGGGGTGGAGTAGGCAGATAATCCACCTCCCTATCCCCCAGGCAAGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CAA 90 bp CACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCTCCCTCTCGGCCAGTCGGGCTaGGGATGCAAGGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: HGSGSVAVSKHSRLLWLPLGQSG*GCKGQL
Trigger: GAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGAG...AGGGAGCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGAGTGGGTGTCAGAACTaGGACAGGGCCATCCTGGTG +
Preference number: 5 (lower is better)
Translates to: CSRSPAIQVPAGLSQSPRSGCQN*DRAILV
Trigger: CACCAGGATGGCCCTGTCCAAGTTCTGACACCCACT...CCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp CTGGGCCAGCAGGGGCCTCGAGGGCACAACGCCACTCTCCACGGGGCACCAACTCAGGTCTCCAAGGCATaGGACTTAGAGAAGTTGAAC +
Preference number: 5 (lower is better)
Translates to: LGQQGPRGHNATLHGAPTQVSKA*DLEKLN
Trigger: GTTCAACTTCTCTAAGTCCAATGCCTTGGAGACCTG...AGTTGGTGCCCCGTGGAGAGTGGCGTTGTGCCCTCGAGGCCCCTGCTGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp ACTGGGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCACAGTAGGGGCTGAATaGTGGTTCATAGCGGCAGTG +
Preference number: 5 (lower is better)
Translates to: TGDRALGERPPGPDAAGATVGAE*WFIAAV
Trigger: CACTGCCGCTATGAACCACAATTCAGCCCCTACTGT...GGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp CAGGGGCCCTGCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATACAGTAGGGGCTGAATaGTGGTTCATAGCGGCAGTG +
Preference number: 5 (lower is better)
Translates to: QGPCSPTFALQSPPPHGHTVGAE*WFIAAV
Trigger: CACTGCCGCTATGAACCACAATTCAGCCCCTACTGT...ATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGCAGGGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp AGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCGTTGCTTTCGGGGCCTaGGCCTCCTCATACTTTGTC +
Preference number: 5 (lower is better)
Translates to: SRSPAIQVPAGLSQSPRVVAFGA*ASSYFV
Trigger: GACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAAC...GACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp GGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAGTTGCTTTCGGGGCCTaGGCCTCCTCATACTTTGTC +
Preference number: 5 (lower is better)
Translates to: GACWALPVSTGQVLSPSQVAFGA*ASSYFV
Trigger: GACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAAC...TTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp AGGGAACGGCTACAGGCTCCCGGAATGGGTTGGCAAGTGGGTGTCAGAACTTGGTCCCTCCACACAGAGTaGGCGGTTGCTTTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: RERLQAPGMGWQVGVRTWSLHTE*AVAFGA
Trigger: GGCCCCGAAAGCAACCGCCAACTCTGTGTGGAGGGA...CCAAGTTCTGACACCCACTTGCCAACCCATTCCGGGAGCCTGTAGCCGTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TTCCAGCTGCAAAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGACTCGGCCAGTCGGGCTaGGGATGCAAGGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: FQLQNLASLREISVVLFGLGQSG*GCKGQL
Trigger: GAGCTGGCCCTTGCATCCCAAGCCCGACTGGCCGAG...TCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTTGCAGCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATGGCTCCCGGAATGGGTaGGCAAGTGGGTGTCAGAAC +
Preference number: 5 (lower is better)
Translates to: SPTFALQSPPPHGHGSGDGSRNG*ASGCQN
Trigger: GTTCTGACACCCACTTGCCAACCCATTCCGGGAGCC...ATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp ACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCAGGCTCCCGGAATGGGTaGGCAAGTGGGTGTCAGAAC +
Preference number: 5 (lower is better)
Translates to: TCSRSPAIQVPAGLSQSPGSRNG*ASGCQN
Trigger: GTTCTGACACCCACTTGCCAACCCATTCCGGGAGCC...TGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp GAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCCCTGCTTTCTACCTTGCCTTTTaGGCTCCAGCTGCACAGCCC +
Preference number: 5 (lower is better)
Translates to: ENQVHVPLLGYPGLRGPAFYLAF*APAAQP
Trigger: GGGCTGTGCAGCTGGAGCCAAAAAGGCAAGGTAGAA...AGCAGGGCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CAA 90 bp GGGTTCAAGGGTGGAATTCTACCCCCAATCCTCCATGCTGGGGCCTCATCCTTGTGCACGTGCCCCTCCTaGGATACCCAGGCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: GFKGGILPPILHAGASSLCTCPS*DTQASG
Trigger: CCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCA...CAAGGATGAGGCCCCAGCATGGAGGATTGGGGGTAGAATTCCACCCTTGAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp AGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCGTTGCTTTCGGGGCCTaGGCCTCCTCATACTTTGTC +
Preference number: 5 (lower is better)
Translates to: SPAIQVPAGLSQSPRVRFVAFGA*ASSYFV
Trigger: GACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAAC...GAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp CCCTCCACAGCTTGCCCTGATCACCAGGTACCCACAGTGGAAAGCAGCCCCTTGAGTGGGTGTCAGAACTaGGACAGGGCCATCCTGGTG +
Preference number: 5 (lower is better)
Translates to: PSTACPDHQVPTVESSPLSGCQN*DRAILV
Trigger: CACCAGGATGGCCCTGTCCAAGTTCTGACACCCACT...CAAGGGGCTGCTTTCCACTGTGGGTACCTGGTGATCAGGGCAAGCTGTGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp ACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCAAGTGGGTGTCAGAACTaGGACAGGGCCATCCTGGTG +
Preference number: 5 (lower is better)
Translates to: TCSRSPAIQVPAGLSQSPSGCQN*DRAILV
Trigger: CACCAGGATGGCCCTGTCCAAGTTCTGACACCCACT...TGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp GAGGCAGCAGGGACCCCAGGCATTTTACTGAGGCTCCAGGTGGCAGGTGATTCTGGCTCCCGGAATGGGTaGGCAAGTGGGTGTCAGAAC +
Preference number: 5 (lower is better)
Translates to: EAAGTPGILLRLQVAGDSGSRNG*ASGCQN
Trigger: GTTCTGACACCCACTTGCCAACCCATTCCGGGAGCC...AGAATCACCTGCCACCTGGAGCCTCAGTAAAATGCCTGGGGTCCCTGCTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TATGGCTCCCTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTTCTACCTTGCCTTTTaGGCTCCAGCTGCACAGCCC +
Preference number: 5 (lower is better)
Translates to: YGSLRQHPTKVGVRGGTVFYLAF*APAAQP
Trigger: GGGCTGTGCAGCTGGAGCCAAAAAGGCAAGGTAGAA...GACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAGGGAGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CAA 90 bp GGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCACTCCTCTTTCTACCTaGCCTTTTTGGCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: GAPATCSRSPAIQVPAGLTPLST*PFWLQL
Trigger: CAGCTGGAGCCAAAAAGGCAAGGTAGAAAGAGGAGT...GAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CAA 90 bp CAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGTGCACGTGCCCCTCCTaGGATACCCAGGCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: QSPRVRFCRRLKTQPTSMCTCPS*DTQASG
Trigger: CCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCA...CATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp GGTGGTGTTGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGCCTGGGATCAGTGCACGTGCCCCTCCTaGGATACCCAGGCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: GGVVWNHSFQPLHPAWDQCTCPS*DTQASG
Trigger: CCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCA...CTGATCCCAGGCTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp CTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGCCTGGGATTGCACGTGCCCCTCCTaGGATACCCAGGCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: LGGVVWNHSFQPLHPAWDCTCPS*DTQASG
Trigger: CCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCA...ATCCCAGGCTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCGCTCTCTTGCTGTCTTaGCCCACTCTTCAAGGGCTT +
Preference number: 5 (lower is better)
Translates to: YRCLLGSPSLHGSGSVAVALLLS*PTLQGL
Trigger: AAGCCCTTGAAGAGTGGGCAAAGACAGCAAGAGAGC...GACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CAA 90 bp ACATCAGCTTCCTCTGGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGGTTGCTTTCGGGGCCTaGGCCTCCTCATACTTTGTC +
Preference number: 5 (lower is better)
Translates to: TSASSGPQGESGARAPPWVAFGA*ASSYFV
Trigger: GACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAAC...CCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCCAGAGGAAGCTGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp GTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCACACAGAGTTGGCGGTaGCTTTCGGGGCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: VSTGQVLSPSQNTADFYGTQSWR*LSGPWP
Trigger: AGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGT...GCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp ACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCTCCCTGACACAGAGTTGGCGGTaGCTTTCGGGGCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: TGQVLSPSQNTADFYGSLTQSWR*LSGPWP
Trigger: AGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGT...CAGGGAGCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp GGGTTCAAGGGTGGAATTCTACCCCCAATCCTCCATGCTGGGGCCTCATCCTTGACACAGAGTTGGCGGTaGCTTTCGGGGCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: GFKGGILPPILHAGASSLTQSWR*LSGPWP
Trigger: AGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGT...CAAGGATGAGGCCCCAGCATGGAGGATTGGGGGTAGAATTCCACCCTTGAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TTCCAGCTGCAAAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGATCCCTCCACACAGAGTaGGCGGTTGCTTTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: FQLQNLASLREISVVLFGSLHTE*AVAFGA
Trigger: GGCCCCGAAAGCAACCGCCAACTCTGTGTGGAGGGA...TCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTTGCAGCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp CTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCTTCTACCTTGCCTTTTaGGCTCCAGCTGCACAGCCC +
Preference number: 5 (lower is better)
Translates to: LGSPSLHGSGSVAVSKHSFYLAF*APAAQP
Trigger: GGGCTGTGCAGCTGGAGCCAAAAAGGCAAGGTAGAA...GCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CAA 90 bp GGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAGAGATCTCGGTGGTGTaGTTTGGAACCATTCCTTCC +
Preference number: 5 (lower is better)
Translates to: GACWALPVSTGQVLSPSQEISVV*FGTIPS
Trigger: GGAAGGAATGGTTCCAAACAACACCACCGAGATCTC...TTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp CCTGCTCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGCTTTACTCCGTGACTTaGTCCAGCCATGACATCAGC +
Preference number: 5 (lower is better)
Translates to: PALPPSPFRAHLPMDMALLYSVT*SSHDIS
Trigger: GCTGATGTCATGGCTGGACAAAGTCACGGAGTAAAG...CAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp GGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGCTTTACTCCGTGACTTaGTCCAGCCATGACATCAGC +
Preference number: 5 (lower is better)
Translates to: GPQGESGARAPPWIPRPQLYSVT*SSHDIS
Trigger: GCTGATGTCATGGCTGGACAAAGTCACGGAGTAAAG...CTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp ACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCTCCCTGGTCCTGTGGGTCCCATaGAACACCACACACTGGCCT +
Preference number: 5 (lower is better)
Translates to: TGQVLSPSQNTADFYGSLVLWVP*NTTHWP
Trigger: AGGCCAGTGTGTGGTGTTCAATGGGACCCACAGGAC...CAGGGAGCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp GGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAACAGGTCTCCAAGGCATaGGACTTAGAGAAGTTGAAC +
Preference number: 5 (lower is better)
Translates to: GACWALPVSTGQVLSPSQQVSKA*DLEKLN
Trigger: GTTCAACTTCTCTAAGTCCAATGCCTTGGAGACCTG...TTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp GAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGGCCTCAGGGGCCCTGCTCAGGTCTCCAAGGCATaGGACTTAGAGAAGTTGAAC +
Preference number: 5 (lower is better)
Translates to: ENQVHVPLLGYPGLRGPAQVSKA*DLEKLN
Trigger: GTTCAACTTCTCTAAGTCCAATGCCTTGGAGACCTG...AGCAGGGCCCCTGAGGCCTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TTCTATGGCTCCCTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTACAGTAGGGGCTGAATaGTGGTTCATAGCGGCAGTG +
Preference number: 5 (lower is better)
Translates to: FYGSLRQHPTKVGVRGGTTVGAE*WFIAAV
Trigger: CACTGCCGCTATGAACCACAATTCAGCCCCTACTGT...AGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAGGGAGCCATAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp GCCCTGCAATACAGGTGCCTGCTGGGCTCTCCCAGTCTCCACGGGTCAGGTTCTTGGCCTCCTCATACTTaGTCCTCCAGTAGAAATGGG +
Preference number: 5 (lower is better)
Translates to: ALQYRCLLGSPSLHGSGSWPPHT*SSSRNG
Trigger: CCCATTTCTACTGGAGGACAAAGTATGAGGAGGCCA...AGAACCTGACCCGTGGAGACTGGGAGAGCCCAGCAGGCACCTGTATTGCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp CTCCACACAGAGTTGGCGGTTGCTTTCGGGGCCTTGGCCTCCTCATACTTTGTCAGTGGGTGTCAGAACTaGGACAGGGCCATCCTGGTG +
Preference number: 5 (lower is better)
Translates to: LHTELAVAFGALASSYFVSGCQN*DRAILV
Trigger: CACCAGGATGGCCCTGTCCAAGTTCTGACACCCACT...GACAAAGTATGAGGAGGCCAAGGCCCCGAAAGCAACCGCCAACTCTGTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp AGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTTCAACTCCTCTTTCTACCTaGCCTTTTTGGCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: RQHPTKVGVRGGTVCWGSTPLST*PFWLQL
Trigger: CAGCTGGAGCCAAAAAGGCAAGGTAGAAAGAGGAGT...TGAACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CAA 90 bp CACCCCTGGCCCTCCACAGCTTGCCCTGATCACCAGGTACCCACAGTGGAAAGCGAGATCTCGGTGGTGTaGTTTGGAACCATTCCTTCC +
Preference number: 5 (lower is better)
Translates to: HPWPSTACPDHQVPTVESEISVV*FGTIPS
Trigger: GGAAGGAATGGTTCCAAACAACACCACCGAGATCTC...GCTTTCCACTGTGGGTACCTGGTGATCAGGGCAAGCTGTGGAGGGCCAGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp CGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTGAGAGGCAGCGAGATCTCGGTGGTGTaGTTTGGAACCATTCCTTCC +
Preference number: 5 (lower is better)
Translates to: RPSEPTSPWTWLWRLRGSEISVV*FGTIPS
Trigger: GGAAGGAATGGTTCCAAACAACACCACCGAGATCTC...GCTGCCTCTCAATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp GGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCCTGTTAGAGAAGTTGAACTaGCTGAAGGTGACTGTGTTT +
Preference number: 5 (lower is better)
Translates to: GTEHWERDLQAQTQQEPLLEKLN*LKVTVF
Trigger: AAACACAGTCACCTTCAGCAAGTTCAACTTCTCTAA...CAGGGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp GGGGACAGAGCACTGGGAGAGAGACCTCCAGGCCCAGACGCAGCAGGAGCCCCTTTAGAGAAGTTGAACTaGCTGAAGGTGACTGTGTTT +
Preference number: 5 (lower is better)
Translates to: GDRALGERPPGPDAAGAPLEKLN*LKVTVF
Trigger: AAACACAGTCACCTTCAGCAAGTTCAACTTCTCTAA...AGGGGCTCCTGCTGCGTCTGGGCCTGGAGGTCTCTCTCCCAGTGCTCTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp CACCCCTGGCCCTCCACAGCTTGCCCTGATCACCAGGTACCCACAGTGGAAAGCCAGGTCTCCAAGGCATaGGACTTAGAGAAGTTGAAC +
Preference number: 5 (lower is better)
Translates to: HPWPSTACPDHQVPTVESQVSKA*DLEKLN
Trigger: GTTCAACTTCTCTAAGTCCAATGCCTTGGAGACCTG...GCTTTCCACTGTGGGTACCTGGTGATCAGGGCAAGCTGTGGAGGGCCAGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp GCCCTGGGACCAAGAGGAGAATTCCAGCTGCAAAACCTGGCCAGCCTGAGGGAGTGGCCTCCTCATACTTaGTCCTCCAGTAGAAATGGG +
Preference number: 5 (lower is better)
Translates to: ALGPRGEFQLQNLASLREWPPHT*SSSRNG
Trigger: CCCATTTCTACTGGAGGACAAAGTATGAGGAGGCCA...CTCCCTCAGGCTGGCCAGGTTTTGCAGCTGGAATTCTCCTCTTGGTCCCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TTCCTCTGGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATACCCAGTGGCCTCCTCATACTTaGTCCTCCAGTAGAAATGGG +
Preference number: 5 (lower is better)
Translates to: FLWAPRRIRCTCPSLDTQWPPHT*SSSRNG
Trigger: CCCATTTCTACTGGAGGACAAAGTATGAGGAGGCCA...CTGGGTATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCCAGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TATGGCTCCCTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCCAGGGAACCAGGCAATaGTCTCCAATCCACATCAAA +
Preference number: 5 (lower is better)
Translates to: YGSLRQHPTKVGVRGGTVQGTRQ*SPIHIK
Trigger: TTTGATGTGGATTGGAGACAATTGCCTGGTTCCCTG...GACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAGGGAGCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CAA 90 bp AGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGCAGCTACCTGGGCAGTaGTGGTGGGGTGGATGGGAA +
Preference number: 5 (lower is better)
Translates to: REISVVLFGTIPSSHSIQQLPGQ*WWGGWE
Trigger: TTCCCATCCACCCCACCACAACTGCCCAGGTAGCTG...CTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CAA 90 bp GGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGGGCTCTTAGAGAAGTTGAACTaGCTGAAGGTGACTGTGTTT +
Preference number: 5 (lower is better)
Translates to: GAPATCSRSPAIQVPAGLLEKLN*LKVTVF
Trigger: AAACACAGTCACCTTCAGCAAGTTCAACTTCTCTAA...GAGCCCAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp CTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTGTCTGCTGGGGTTTGGACTTAGAGAAGTaGAACTTGCTGAAGGTGACT +
Preference number: 5 (lower is better)
Translates to: LRQHPTKVGVRGGTVCWGLDLEK*NLLKVT
Trigger: AGTCACCTTCAGCAAGTTCAACTTCTCTAAGTCCAA...ACCCCAGCAGACAGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp CAGCAGGAGCCCCTGCCACATGCAGTCGGAGCCCTGCAATACAGGTGCCTGCTGTTGGACTTAGAGAAGTaGAACTTGCTGAAGGTGACT +
Preference number: 5 (lower is better)
Translates to: QQEPLPHAVGALQYRCLLLDLEK*NLLKVT
Trigger: AGTCACCTTCAGCAAGTTCAACTTCTCTAAGTCCAA...CAGCAGGCACCTGTATTGCAGGGCTCCGACTGCATGTGGCAGGGGCTCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp GGGTTCAAGGGTGGAATTCTACCCCCAATCCTCCATGCTGGGGCCTCATCCTTGACAGTAGGGGCTGAATaGTGGTTCATAGCGGCAGTG +
Preference number: 5 (lower is better)
Translates to: GFKGGILPPILHAGASSLTVGAE*WFIAAV
Trigger: CACTGCCGCTATGAACCACAATTCAGCCCCTACTGT...CAAGGATGAGGCCCCAGCATGGAGGATTGGGGGTAGAATTCCACCCTTGAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTACAGTAGGGGCTGAATaGTGGTTCATAGCGGCAGTG +
Preference number: 5 (lower is better)
Translates to: SQSPRVRFCRRLKTQPTSTVGAE*WFIAAV
Trigger: CACTGCCGCTATGAACCACAATTCAGCCCCTACTGT...AGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp ACAGGCTCCCGGAATGGGTTGGCAAGTGGGTGTCAGAACTTGGACAGGGCCATCTGGCCTCCTCATACTTaGTCCTCCAGTAGAAATGGG +
Preference number: 5 (lower is better)
Translates to: TGSRNGLASGCQNLDRAIWPPHT*SSSRNG
Trigger: CCCATTTCTACTGGAGGACAAAGTATGAGGAGGCCA...GATGGCCCTGTCCAAGTTCTGACACCCACTTGCCAACCCATTCCGGGAGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp GACTGTCTGCTGGGGTTCAAGGGTGGAATTCTACCCCCAATCCTCCATGCTGGGTCTCGGTGGTGTTGTTaGGAACCATTCCTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: DCLLGFKGGILPPILHAGSRWCC*EPFLPA
Trigger: GGCTGGAAGGAATGGTTCCAAACAACACCACCGAGA...CCCAGCATGGAGGATTGGGGGTAGAATTCCACCCTTGAACCCCAGCAGACAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp AGAGGAGAATTCCAGCTGCAAAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTCTCGGTGGTGTTGTTaGGAACCATTCCTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: RGEFQLQNLASLREISVVSRWCC*EPFLPA
Trigger: GGCTGGAAGGAATGGTTCCAAACAACACCACCGAGA...CACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTTGCAGCTGGAATTCTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp GTGGGTGTCAGAACTTGGACAGGGCCATCCTGGTGTCTGTGTCTGACTCCCAGCGAGATCTCGGTGGTGTaGTTTGGAACCATTCCTTCC +
Preference number: 5 (lower is better)
Translates to: VGVRTWTGPSWCLCLTPSEISVV*FGTIPS
Trigger: GGAAGGAATGGTTCCAAACAACACCACCGAGATCTC...GCTGGGAGTCAGACACAGACACCAGGATGGCCCTGTCCAAGTTCTGACACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TGGCACCAAGTCTTCACCTGCCCCAGGGAACCAGGCAATTGTCTCCAATCCACAAGGAAGAGGGTGGCTTaGCTGGCTTTACTCCGTGAC +
Preference number: 5 (lower is better)
Translates to: WHQVFTCPREPGNCLQSTRKRVA*LALLRD
Trigger: GTCACGGAGTAAAGCCAGCAAAGCCACCCTCTTCCT...TGTGGATTGGAGACAATTGCCTGGTTCCCTGGGGCAGGTGAAGACTTGGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CAA 90 bp TGGCACCAAGTCTTCACCTGCCCCAGGGAACCAGGCAATTGTCTCCAATCCACACAGGCTGCAGCTCTCTaGCTGTCTTTGCCCACTCTT +
Preference number: 5 (lower is better)
Translates to: WHQVFTCPREPGNCLQSTQAAAL*LSLPTL
Trigger: AAGAGTGGGCAAAGACAGCAAGAGAGCTGCAGCCTG...TGTGGATTGGAGACAATTGCCTGGTTCCCTGGGGCAGGTGAAGACTTGGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CAA 90 bp GACTGTCTGCTGGGGTTCAAGGGTGGAATTCTACCCCCAATCCTCCATGCTGGGCCACTGTGGCATTCTTaGTGGCACCAAGTCTTCACC +
Preference number: 5 (lower is better)
Translates to: DCLLGFKGGILPPILHAGPLWHS*WHQVFT
Trigger: GGTGAAGACTTGGTGCCACAAAGAATGCCACAGTGG...CCCAGCATGGAGGATTGGGGGTAGAATTCCACCCTTGAACCCCAGCAGACAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CAA 90 bp CACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGGCTCCCTACTCCTCTTTCTACCTaGCCTTTTTGGCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: HGSGSVAVSKHSRLLWLPTPLST*PFWLQL
Trigger: CAGCTGGAGCCAAAAAGGCAAGGTAGAAAGAGGAGT...AGGGAGCCATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000442475.5
CDS-3UTR CAA 90 bp CAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGTCTCGGTGGTGTTGTTaGGAACCATTCCTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: QSPRVRFCRRLKTQPTSMSRWCC*EPFLPA
Trigger: GGCTGGAAGGAATGGTTCCAAACAACACCACCGAGA...CATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTCTTTACTCCGTGACTTaGTCCAGCCATGACATCAGC +
Preference number: 5 (lower is better)
Translates to: SQSPRVRFCRRLKTQPTSLYSVT*SSHDIS
Trigger: GCTGATGTCATGGCTGGACAAAGTCACGGAGTAAAG...AGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS TCA 90 bp GTCACCCACAGGCCTGGAGGCCTTAAGAAAGTGACTCAACCTCACTaGGCCTCAGTCTTCTCCTCTGAAATGGGGATCACAGGACTTCCT +
Preference number: 5 (lower is better)
Translates to: VTHRPGGLKKVTQPH*ASVFSSEMGITGLP
Trigger: AGGAAGTCCTGTGATCCCCATTTCAGAGGAGAAGACTGAGGCTCAGTGAGGTTGAGTCACTTTCTTAAGGCCTCCAGGCCTGTGGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469722.2
CDS GCA 90 bp TATGTGAAGACTGAACATAATGATTCAGGAAAAGATGTAGCCCAGTaGCTGGGGGACACCGAGCACAGGCTGAGCCTTCAGCCACCTGGG +
Preference number: 5 (lower is better)
Translates to: YVKTEHNDSGKDVAQ*LGDTEHRLSLQPPG
Trigger: CCCAGGTGGCTGAAGGCTCAGCCTGTGCTCGGTGTCCCCCAGGCACTGGGCTACATCTTTTCCTGAATCATTATGTTCAGTCTTCACATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469722.2
CDS-3UTR CAA 90 bp CCCGCCCTGGGACCAAGAGGAGAATTCCAGCTGCAAAACCTGGCCAGCCTGAGGTTAGAGAAGTTGAACTaGCTGAAGGTGACTGTGTTT +
Preference number: 5 (lower is better)
Translates to: PALGPRGEFQLQNLASLRLEKLN*LKVTVF
Trigger: AAACACAGTCACCTTCAGCAAGTTCAACTTCTCTAA...CCTCAGGCTGGCCAGGTTTTGCAGCTGGAATTCTCCTCTTGGTCCCAGGGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TCTCCCACCTTCGCCCTTCAGAGCCCACCTCCCCATGGACATGGCTCTGGAGATTTGGACTTAGAGAAGTaGAACTTGCTGAAGGTGACT +
Preference number: 5 (lower is better)
Translates to: SPTFALQSPPPHGHGSGDLDLEK*NLLKVT
Trigger: AGTCACCTTCAGCAAGTTCAACTTCTCTAAGTCCAA...ATCTCCAGAGCCATGTCCATGGGGAGGTGGGCTCTGAAGGGCGAAGGTGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TTCTATGGCTCCCTGAGGCAGCACCCTACCAAGGTGGGAGTCAGGGGAGGGACTTTGGACTTAGAGAAGTaGAACTTGCTGAAGGTGACT +
Preference number: 5 (lower is better)
Translates to: FYGSLRQHPTKVGVRGGTLDLEK*NLLKVT
Trigger: AGTCACCTTCAGCAAGTTCAACTTCTCTAAGTCCAA...AGTCCCTCCCCTGACTCCCACCTTGGTAGGGTGCTGCCTCAGGGAGCCATAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TTCCAGCTGCAAAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGATGGCCTCCTCATACTTaGTCCTCCAGTAGAAATGGG +
Preference number: 5 (lower is better)
Translates to: FQLQNLASLREISVVLFGWPPHT*SSSRNG
Trigger: CCCATTTCTACTGGAGGACAAAGTATGAGGAGGCCA...TCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTTTGCAGCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp AGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCCAGCCACTCCATCCAGTCTCGGTGGTGTTGTTaGGAACCATTCCTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: REISVVLFGTIPSSHSIQSRWCC*EPFLPA
Trigger: GGCTGGAAGGAATGGTTCCAAACAACACCACCGAGA...CTGGATGGAGTGGCTGGAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TCAGCTTCCTCTGGGCCCCAAGGAGAATCAGGTGCACGTGCCCCTCCTTGGATATTGGACTTAGAGAAGTaGAACTTGCTGAAGGTGACT +
Preference number: 5 (lower is better)
Translates to: SASSGPQGESGARAPPWILDLEK*NLLKVT
Trigger: AGTCACCTTCAGCAAGTTCAACTTCTCTAAGTCCAA...TATCCAAGGAGGGGCACGTGCACCTGATTCTCCTTGGGGCCCAGAGGAAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp CAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTATGCAGGTCTCCAAGGCATaGGACTTAGAGAAGTTGAAC +
Preference number: 5 (lower is better)
Translates to: QSPRVRFCRRLKTQPTSMQVSKA*DLEKLN
Trigger: GTTCAACTTCTCTAAGTCCAATGCCTTGGAGACCTG...CATAGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp AAACCTGGCCAGCCTGAGGGAGATCTCGGTGGTGTTGTTTGGAACCATTCCTTCCTTTACTCCGTGACTTaGTCCAGCCATGACATCAGC +
Preference number: 5 (lower is better)
Translates to: KPGQPEGDLGGVVWNHSFLYSVT*SSHDIS
Trigger: GCTGATGTCATGGCTGGACAAAGTCACGGAGTAAAG...GAAGGAATGGTTCCAAACAACACCACCGAGATCTCCCTCAGGCTGGCCAGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS-3UTR CAA 90 bp TGGCCTGCTGGCGTATCCACTGTGGCATTCTTTGTGGCACCAAGTCTTCACCTGCATAATAATAATTGCTaGGCCAGCCATGTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: WPAGVSTVAFFVAPSLHLHNNNC*ASHVAC
Trigger: GCAGGCCACATGGCTGGCCAAGCAATTATTATTATG...CAGGTGAAGACTTGGTGCCACAAAGAATGCCACAGTGGATACGCCAGCAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413302.6
CDS-3UTR CAA 90 bp TCCCAGTCTCCACGGGTCAGGTTCTGTCGCCGTCTCAAAACACAGCCGACTTCTTTAGAGAAGTTGAACTaGCTGAAGGTGACTGTGTTT +
Preference number: 5 (lower is better)
Translates to: SQSPRVRFCRRLKTQPTSLEKLN*LKVTVF
Trigger: AAACACAGTCACCTTCAGCAAGTTCAACTTCTCTAA...AGAAGTCGGCTGTGTTTTGAGACGGCGACAGAACCTGACCCGTGGAGACTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000422210.5
ENST00000432930.5
ENST00000442475.5
CDS GCA 72 bp GCCCACAGTGCTCGCACTCACCACGCCCAGCCAAGCTaGCCCGGTGCCCAGTGTGACGGCCGTGGGGATGAG +
Preference number: 6 (lower is better)
Translates to: AHSARTHHAQPS*PGAQCDGRGDE
Trigger: CTCATCCCCACGGCCGTCACACTGGGCACCGGGGCAGCTTGGCTGGGCGTGGTGAGTGCGAGCACTGTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487342.1
CDS GCA 72 bp GATGGGAGGGCCTGGACACCTCATGGGAACTGCTGCTaGCCAGAGCTCGGGGTCCTGTCACCCACAGGCCTG +
Preference number: 6 (lower is better)
Translates to: DGRAWTPHGNCC*PELGVLSPTGL
Trigger: CAGGCCTGTGGGTGACAGGACCCCGAGCTCTGGGCAGCAGCAGTTCCCATGAGGTGTCCAGGCCCTCCCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469722.2
CDS GCA 72 bp CAGGATGGGAGGGCCTGGACACCTCATGGGAACTGCTaGTGCCCAGAGCTCGGGGTCCTGTCACCCACAGGC +
Preference number: 6 (lower is better)
Translates to: QDGRAWTPHGNC*CPELGVLSPTG
Trigger: GCCTGTGGGTGACAGGACCCCGAGCTCTGGGCAGCAGCAGTTCCCATGAGGTGTCCAGGCCCTCCCATCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469722.2
CDS CCA 72 bp GAGGCAGGACCAGGATGGGAGGGCCTGGACACCTCATaGGAACTGCTGCTGCCCAGAGCTCGGGGTCCTGTC +
Preference number: 6 (lower is better)
Translates to: EAGPGWEGLDTS*ELLLPRARGPV
Trigger: GACAGGACCCCGAGCTCTGGGCAGCAGCAGTTCCCATGAGGTGTCCAGGCCCTCCCATCCTGGTCCTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469722.2
CDS CCA 72 bp TTCGGGGCAGTCCTCGTCGACCCAGCAGTTAGCCAGTaGGACGGACGGGTGCTCTGGGCATCTGCCCTGAAC +
Preference number: 6 (lower is better)
Translates to: FGAVLVDPAVSQ*DGRVLWASALN
Trigger: GTTCAGGGCAGATGCCCAGAGCACCCGTCCGTCCCACTGGCTAACTGCTGGGTCGACGAGGACTGCCCCGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401443.5
ENST00000413302.6
ENST00000432930.5
CDS GCA 72 bp TTGGACACACCCTGGTCAGCAGCACTCACTGCAGCCTaGAGGTGCCCACAGTGCTCGCACTCACCACGCCCA +
Preference number: 6 (lower is better)
Translates to: LDTPWSAALTAA*RCPQCSHSPRP
Trigger: TGGGCGTGGTGAGTGCGAGCACTGTGGGCACCTGCAGGCTGCAGTGAGTGCTGCTGACCAGGGTGTGTCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487342.1
CDS GCA 72 bp CTGCCACCTCCCCAGCCTGCACCCCGAGACTCAATGTaGAGGCACCGGAGGCTCCAGCATGCATTGGACACA +
Preference number: 6 (lower is better)
Translates to: LPPPQPAPRDSM*RHRRLQHALDT
Trigger: TGTGTCCAATGCATGCTGGAGCCTCCGGTGCCTGCACATTGAGTCTCGGGGTGCAGGCTGGGGAGGTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487342.1
CDS CAA 90 bp GCACCCCGAGACTCAATGTGCAGGCACCGGAGGCTCCAGCATGCATaGGACACACCCTGGTCAGCAGCACTCACTGCAGCCTGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: APRDSMCRHRRLQHA*DTPWSAALTAACRC
Trigger: GCACCTGCAGGCTGCAGTGAGTGCTGCTGACCAGGGTGTGTCCAATGCATGCTGGAGCCTCCGGTGCCTGCACATTGAGTCTCGGGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487342.1
CDS GCA 72 bp GCATGCATTGGACACACCCTGGTCAGCAGCACTCACTaGAGCCTGCAGGTGCCCACAGTGCTCGCACTCACC +
Preference number: 6 (lower is better)
Translates to: ACIGHTLVSSTH*SLQVPTVLALT
Trigger: GGTGAGTGCGAGCACTGTGGGCACCTGCAGGCTGCAGTGAGTGCTGCTGACCAGGGTGTGTCCAATGCATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487342.1
CDS TCA 72 bp GGAGAATGGCGTGAACCTGAGAGGCAGAGCTTGCAGTaGGCTGATATCTGCCACTGCACTCCAGCGTGGGTG +
Preference number: 6 (lower is better)
Translates to: GEWREPERQSLQ*ADICHCTPAWV
Trigger: CACCCACGCTGGAGTGCAGTGGCAGATATCAGCTCACTGCAAGCTCTGCCTCTCAGGTTCACGCCATTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469722.2
CDS GCA 72 bp ACTGAACATAATGATTCAGGAAAAGATGTAGCCCAGTaGCTGGGGGACACCGAGCACAGGCTGAGCCTTCAG +
Preference number: 6 (lower is better)
Translates to: TEHNDSGKDVAQ*LGDTEHRLSLQ
Trigger: CTGAAGGCTCAGCCTGTGCTCGGTGTCCCCCAGGCACTGGGCTACATCTTTTCCTGAATCATTATGTTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469722.2
CDS CCA 72 bp TCACAGGTCCTGTGGGTCCCATTGAACACCACACACTaGCCTGTTTTTACACCTGAGGTGGCTTCACGAAGT +
Preference number: 6 (lower is better)
Translates to: SQVLWVPLNTTH*PVFTPEVASRS
Trigger: ACTTCGTGAAGCCACCTCAGGTGTAAAAACAGGCCAGTGTGTGGTGTTCAATGGGACCCACAGGACCTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422210.5
ENST00000442475.5
CDS TCA 72 bp AGGCCTGGAGGCCTTAAGAAAGTGACTCAACCTCACTaGGCCTCAGTCTTCTCCTCTGAAATGGGGATCACA +
Preference number: 6 (lower is better)
Translates to: RPGGLKKVTQPH*ASVFSSEMGIT
Trigger: TGTGATCCCCATTTCAGAGGAGAAGACTGAGGCTCAGTGAGGTTGAGTCACTTTCTTAAGGCCTCCAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469722.2
CDS TCA 72 bp GATATTCCAGCTTGGCTCTTGCTATTAGAACCTCCCTaGGCATGTGCGCAGCTCTGGGTGTCACACTACCAA +
Preference number: 6 (lower is better)
Translates to: DIPAWLLLLEPP*ACAQLWVSHYQ
Trigger: TTGGTAGTGTGACACCCAGAGCTGCGCACATGCTCAGGGAGGTTCTAATAGCAAGAGCCAAGCTGGAATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469722.2
CDS CCA 72 bp AAGATGAAAGCTGCCTCAGGACATATTAATAGAGGCTaGGCACAGACAAGGGGAGGTGATATTCCAGCTTGG +
Preference number: 6 (lower is better)
Translates to: KMKAASGHINRG*AQTRGGDIPAW
Trigger: CCAAGCTGGAATATCACCTCCCCTTGTCTGTGCCCAGCCTCTATTAATATGTCCTGAGGCAGCTTTCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469722.2
CDS CCA 72 bp AATCCTGAATTCACCATGAGCAAGAGTGTGCTGTGTTaGCCCACAAAGATGAAAGCTGCCTCAGGACATATT +
Preference number: 6 (lower is better)
Translates to: NPEFTMSKSVLC*PTKMKAASGHI
Trigger: AATATGTCCTGAGGCAGCTTTCATCTTTGTGGGCCAACACAGCACACTCTTGCTCATGGTGAATTCAGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469722.2