RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for P2RX5 (Homo sapiens)

Ensembl gene IDs: ENSG00000083454

Ensembl transcript IDs: ENST00000225328.10, ENST00000345901.7, ENST00000547178.5, ENST00000547933.1, ENST00000549063.1, ENST00000550772.1, ENST00000551178.5, ENST00000552050.5, ENST00000552276.5, ENST00000552456.1, ENST00000552723.1

Found 611 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTCCAGGAGCTGTGGGCACACAGATCCGTTCCCCTTCTGACTGCTaGTTCCACGCTTCGCCTCGGGTGGCTCCTGCAGCTCCTGCTGCT +
Preference number: 1 (lower is better)
Translates to: APGAVGTQIRSPSDC*FHASPRVAPAAPAA
Trigger: AGCAGCAGGAGCTGCAGGAGCCACCCGAGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGAACGGATCTGTGTGCCCACAGCTCCTGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552456.1
3UTR CCA 90 bp GTAAGCAGAGGCAATTCACGTGCTCCTGTGGGGCTCCAGGAGCTGTaGGCACACAGATCCGTTCCCCTTCTGACTGCTGCTTCCACGCTT +
Preference number: 1 (lower is better)
Translates to: VSRGNSRAPVGLQEL*AHRSVPLLTAASTL
Trigger: AAGCGTGGAAGCAGCAGTCAGAAGGGGAACGGATCTGTGTGCCCACAGCTCCTGGAGCCCCACAGGAGCACGTGAATTGCCTCTGCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552456.1
3UTR CCA 90 bp GAGGGAAGCTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATaGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTGAGGTA +
Preference number: 1 (lower is better)
Translates to: EGSCGTCRGEWAGTK*SPFPDTHNAIPSEV
Trigger: TACCTCACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCTTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR CCA 90 bp TGGAGAGTATGCTCTGAGGGAAGCTGCGGCACTTGCAGAGGGGAGTaGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCT +
Preference number: 1 (lower is better)
Translates to: WRVCSEGSCGTCRGE*AGTKWSPFPDTHNA
Trigger: AGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCTTCCCTCAGAGCATACTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR GCA 90 bp GGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTATaGTCTGAGGGAAGCTGCGGCACTTGCAGAGGGGAGTGGGCTGGA +
Preference number: 1 (lower is better)
Translates to: GGVFRRESTWIHWRV*SEGSCGTCRGEWAG
Trigger: TCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCTTCCCTCAGAGCATACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR CCA 90 bp TGGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTaGAGAGTATGCTCTGAGGGAAGCTGCGGCACTTGCAGAGGGGAG +
Preference number: 1 (lower is better)
Translates to: WQEGGVFRRESTWIH*RVCSEGSCGTCRGE
Trigger: CTCCCCTCTGCAAGTGCCGCAGCTTCCCTCAGAGCATACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR CCA 90 bp CCCTGTGATGTGGCATTGATAGCACCCAATGTACAAATTTCCCGTTaGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGC +
Preference number: 1 (lower is better)
Translates to: PCDVALIAPNVQISR*AASWDSQRHGITGC
Trigger: GCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTATCAATGCCACATCACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
3UTR TCA 90 bp GCATCAGACGTGGAGGTCACTTTGCTCTGTGATGGCTGGTCCCTGTaGTGTGGCATTGATAGCACCCAATGTACAAATTTCCCGTTGGGC +
Preference number: 1 (lower is better)
Translates to: ASDVEVTLLCDGWSL*CGIDSTQCTNFPLG
Trigger: GCCCAACGGGAAATTTGTACATTGGGTGCTATCAATGCCACATCACAGGGACCAGCCATCACAGAGCAAAGTGACCTCCACGTCTGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
3UTR CCA 90 bp ATCTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTaGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCAC +
Preference number: 1 (lower is better)
Translates to: ISPTLILCTGLRANS*QEGGVFRRESTWIH
Trigger: GTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp CTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGAACTGACGGCAGGGGGTaGGGCAAAAAGACAGCCATG +
Preference number: 2 (lower is better)
Translates to: LRHLQRGVGWNQMEPFSGTDGRG*GKKTAM
Trigger: CATGGCTGTCTTTTTGCCCCACCCCCTGCCGTCAGT...TCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR TCA 90 bp CCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGAGATGGCTGGTCCCTGTaGTGTGGCATTGATAGCACC +
Preference number: 2 (lower is better)
Translates to: PVGQHPGIPKGMGSLGARDGWSL*CGIDST
Trigger: GGTGCTATCAATGCCACATCACAGGGACCAGCCATC...TCTAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
3UTR-3UTR TCA 90 bp CCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAAAGGAAGAAGGAGAAAGGAAGAACTaGCGGCAGGGGGTGGGGCAA +
Preference number: 2 (lower is better)
Translates to: PIYNPFPSAGSQPRRKEEGERKN*RQGVGQ
Trigger: TTGCCCCACCCCCTGCCGTCAGTTCTTCCTTTCTCC...TTCTTCCTTTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp GTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAACTGACGGCAGGGGGTaGGGCAAAAAGACAGCCATG +
Preference number: 2 (lower is better)
Translates to: VMFPIYNPFPSAGSQPRRTDGRG*GKKTAM
Trigger: CATGGCTGTCTTTTTGCCCCACCCCCTGCCGTCAGT...TCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp AGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCGGGCTCCAGGAGCTGTaGGCACACAGATCCGTTCCC +
Preference number: 2 (lower is better)
Translates to: RCSRTPEGSHVPHLQPVPGLQEL*AHRSVP
Trigger: GGGAACGGATCTGTGTGCCCACAGCTCCTGGAGCCC...GGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552456.1
3UTR-3UTR CCA 90 bp TTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAAAGGCATGGGATCACTaGGTGCTAGACGGCTGGGTT +
Preference number: 2 (lower is better)
Translates to: FPLGSILGFPKAWDHWVLKAWDH*VLDGWV
Trigger: AACCCAGCCGTCTAGCACCCAGTGATCCCATGCCTT...TAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp CCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGAGGATTCCCAAAGGCATaGGATCACTGGGTGCTAGAC +
Preference number: 2 (lower is better)
Translates to: PVGQHPGIPKGMGSLGARGFPKA*DHWVLD
Trigger: GTCTAGCACCCAGTGATCCCATGCCTTTGGGAATCC...TCTAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
3UTR-3UTR TCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCACGCCAAGGAGAAGCTaGGGCCATAGCGTTGCCCCC +
Preference number: 2 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSTPRRS*GHSVAP
Trigger: GGGGGCAACGCTATGGCCTCAGCTTCTCCTTGGCGT...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
3UTR-3UTR GCA 90 bp CCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAAAGGAAGAAACGTGGAGGTCACTTTaGTCTGTGATGGCTGGTCCC +
Preference number: 2 (lower is better)
Translates to: PIYNPFPSAGSQPRRKEETWRSL*SVMAGP
Trigger: GGGACCAGCCATCACAGAGCAAAGTGACCTCCACGT...TTCTTCCTTTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR GCA 90 bp CGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGACGTGGAGGTCACTTTaGTCTGTGATGGCTGGTCCC +
Preference number: 2 (lower is better)
Translates to: RKEVMFPIYNPFPSAGSQTWRSL*SVMAGP
Trigger: GGGACCAGCCATCACAGAGCAAAGTGACCTCCACGT...CTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp CAAAAAGACAGCCATGATGGGTCCGTCCTGATGACCCCAGCATCAGACGTGGAGAAGGCATGGGATCACTaGGTGCTAGACGGCTGGGTT +
Preference number: 2 (lower is better)
Translates to: QKDSHDGSVLMTPASDVEKAWDH*VLDGWV
Trigger: AACCCAGCCGTCTAGCACCCAGTGATCCCATGCCTT...CTCCACGTCTGATGCTGGGGTCATCAGGACGGACCCATCATGGCTGTCTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp GTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGCCCCAGCATCAGACGTaGAGGTCACTTTGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: VGWNQMEPFSGHAQCYSQPQHQT*RSLCSV
Trigger: CACAGAGCAAAGTGACCTCCACGTCTGATGCTGGGG...CTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp AGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATCCCCAGCATCAGACGTaGAGGTCACTTTGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: RGVGWNQMEPFSGHAQCYPQHQT*RSLCSV
Trigger: CACAGAGCAAAGTGACCTCCACGTCTGATGCTGGGG...ATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp CTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGAAGGACTGACGGCAGGGGGTaGGGCAAAAAGACAGCCATG +
Preference number: 2 (lower is better)
Translates to: LPHFNSVYWPKGKQLAGRTDGRG*GKKTAM
Trigger: CATGGCTGTCTTTTTGCCCCACCCCCTGCCGTCAGT...CCTTCCTGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR TCA 90 bp ATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAAAGGCAAAAAGACAGCCATaGTGGGTCCGTCCTGATGAC +
Preference number: 2 (lower is better)
Translates to: MFPIYNPFPSAGSQPRRKAKRQP*WVRPDD
Trigger: GTCATCAGGACGGACCCATCATGGCTGTCTTTTTGC...CTTTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR TCA 90 bp CGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGGCAAAAAGACAGCCATaGTGGGTCCGTCCTGATGAC +
Preference number: 2 (lower is better)
Translates to: RKEVMFPIYNPFPSAGSQAKRQP*WVRPDD
Trigger: GTCATCAGGACGGACCCATCATGGCTGTCTTTTTGC...CTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR TCA 90 bp TGGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTAACTGCGGTCCTTAGCTaGGGTGCTCAAGGACTCCGG +
Preference number: 2 (lower is better)
Translates to: WQEGGVFRRESTWIHWRVTAVLS*GAQGLR
Trigger: CCGGAGTCCTTGAGCACCTCAGCTAAGGACCGCAGT...TACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR TCA 90 bp GGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTGAGGTACTGGAGAGTATGCTCTaGGGGAAGCTGCGGCACTTG +
Preference number: 2 (lower is better)
Translates to: GTKWSPFPDTHNAIPSEVLESML*GKLRHL
Trigger: CAAGTGCCGCAGCTTCCCTCAGAGCATACTCTCCAG...TACCTCACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR GCA 90 bp GAGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCACGTGGAGGTCACTTTaGTCTGTGATGGCTGGTCCC +
Preference number: 2 (lower is better)
Translates to: EVLKDSGRKSCSPFTTRSTWRSL*SVMAGP
Trigger: GGGACCAGCCATCACAGAGCAAAGTGACCTCCACGT...GGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR GCA 90 bp CATCTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGACGTTCCCCTTCTGACTaGTGCTTCCACGCTTCGCCT +
Preference number: 2 (lower is better)
Translates to: HLPHFNSVYWPKGKQLAGRSPSD*CFHASP
Trigger: AGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGAACG...TCCTGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552456.1
3UTR-3UTR CCA 90 bp TGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTAAGGCATGGGATCACTaGGTGCTAGACGGCTGGGTT +
Preference number: 2 (lower is better)
Translates to: WAGTKWSPFPDTHNAIPSKAWDH*VLDGWV
Trigger: AACCCAGCCGTCTAGCACCCAGTGATCCCATGCCTT...ACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp CAAAAAGACAGCCATGATGGGTCCGTCCTGATGACCCCAGCATCAGACGTGGAGGGATTCCCAAAGGCATaGGATCACTGGGTGCTAGAC +
Preference number: 2 (lower is better)
Translates to: QKDSHDGSVLMTPASDVEGFPKA*DHWVLD
Trigger: GTCTAGCACCCAGTGATCCCATGCCTTTGGGAATCC...CTCCACGTCTGATGCTGGGGTCATCAGGACGGACCCATCATGGCTGTCTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp TTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGTACAAATTTCCCGTTaGGCAGCATCCTGGGATTCC +
Preference number: 2 (lower is better)
Translates to: FPLGSILGFPKAWDHWVLVQISR*AASWDS
Trigger: GGAATCCCAGGATGCTGCCCAACGGGAAATTTGTAC...TAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp TTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAAGTACAAATTTCCCGTTaGGCAGCATCCTGGGATTCC +
Preference number: 2 (lower is better)
Translates to: LQRGVGWNQMEPFSGHAQVQISR*AASWDS
Trigger: GGAATCCCAGGATGCTGCCCAACGGGAAATTTGTAC...TTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp CTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGAAGGCCCCAGCATCAGACGTaGAGGTCACTTTGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: LPHFNSVYWPKGKQLAGRPQHQT*RSLCSV
Trigger: CACAGAGCAAAGTGACCTCCACGTCTGATGCTGGGG...CCTTCCTGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp CTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGAAGGCAGAGGGGAGTGGGCTaGAACCAAATGGAGCCCTTT +
Preference number: 2 (lower is better)
Translates to: LPHFNSVYWPKGKQLAGRQRGVG*NQMEPF
Trigger: AAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTG...CCTTCCTGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR TCA 90 bp TGCCATCTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGATGGCTGGTCCCTGTaGTGTGGCATTGATAGCACC +
Preference number: 2 (lower is better)
Translates to: CHLPHFNSVYWPKGKQLADGWSL*CGIDST
Trigger: GGTGCTATCAATGCCACATCACAGGGACCAGCCATC...TGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAGATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR TCA 90 bp CACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGATGGCTGGTCCCTGTaGTGTGGCATTGATAGCACC +
Preference number: 2 (lower is better)
Translates to: HPMYKFPVGQHPGIPKGMDGWSL*CGIDST
Trigger: GGTGCTATCAATGCCACATCACAGGGACCAGCCATC...CATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
3UTR-3UTR TCA 90 bp GCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACAATGCTATTCCCAGTaGGGTAATCTAGGAACTCTA +
Preference number: 2 (lower is better)
Translates to: AALAEGSGLEPNGALFRTQCYSQ*GNLGTL
Trigger: TAGAGTTCCTAGATTACCTCACTGGGAATAGCATTG...TGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp TGCCATCTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAAAGGCATGGGATCACTaGGTGCTAGACGGCTGGGTT +
Preference number: 2 (lower is better)
Translates to: CHLPHFNSVYWPKGKQLAKAWDH*VLDGWV
Trigger: AACCCAGCCGTCTAGCACCCAGTGATCCCATGCCTT...TGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAGATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp ATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAAAGGTACAAATTTCCCGTTaGGCAGCATCCTGGGATTCC +
Preference number: 2 (lower is better)
Translates to: MFPIYNPFPSAGSQPRRKVQISR*AASWDS
Trigger: GGAATCCCAGGATGCTGCCCAACGGGAAATTTGTAC...CTTTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp CACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGCCCCAGCATCAGACGTaGAGGTCACTTTGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: HPMYKFPVGQHPGIPKGMPQHQT*RSLCSV
Trigger: CACAGAGCAAAGTGACCTCCACGTCTGATGCTGGGG...CATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp TGCCATCTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCACCCCAGCATCAGACGTaGAGGTCACTTTGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: CHLPHFNSVYWPKGKQLAPQHQT*RSLCSV
Trigger: CACAGAGCAAAGTGACCTCCACGTCTGATGCTGGGG...TGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAGATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp GGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTGAGGTATGGGCTGGAACCAAATaGAGCCCTTTTCCGGACACG +
Preference number: 2 (lower is better)
Translates to: GTKWSPFPDTHNAIPSEVWAGTK*SPFPDT
Trigger: CGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCA...TACCTCACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp CATCTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGATGGGCTGGAACCAAATaGAGCCCTTTTCCGGACACG +
Preference number: 2 (lower is better)
Translates to: HLPHFNSVYWPKGKQLAGWAGTK*SPFPDT
Trigger: CGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCA...TCCTGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp CATCTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGACAGAGGGGAGTGGGCTaGAACCAAATGGAGCCCTTT +
Preference number: 2 (lower is better)
Translates to: HLPHFNSVYWPKGKQLAGQRGVG*NQMEPF
Trigger: AAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTG...TCCTGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp TGCCATCTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCACAGAGGGGAGTGGGCTaGAACCAAATGGAGCCCTTT +
Preference number: 2 (lower is better)
Translates to: CHLPHFNSVYWPKGKQLAQRGVG*NQMEPF
Trigger: AAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTG...TGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAGATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR CAA 90 bp TGGAGGTCACTTTGCTCTGTGATGGCTGGTCCCTGTGATGTGGCATaGATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGG +
Preference number: 2 (lower is better)
Translates to: WRSLCSVMAGPCDVA*IAPNVQISRWAASW
Trigger: CCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTATCAATGCCACATCACAGGGACCAGCCATCACAGAGCAAAGTGACCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
3UTR-3UTR TCA 90 bp GGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTATGATGGCTGGTCCCTGTaGTGTGGCATTGATAGCACC +
Preference number: 2 (lower is better)
Translates to: GRKVVSLGERVLGSTGEYDGWSL*CGIDST
Trigger: GGTGCTATCAATGCCACATCACAGGGACCAGCCATC...ATACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR TCA 90 bp CCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGGGAGAAAGGAAGAACTaGCGGCAGGGGGTGGGGCAA +
Preference number: 2 (lower is better)
Translates to: PNKSVREYISWAGPRKRLGERKN*RQGVGQ
Trigger: TTGCCCCACCCCCTGCCGTCAGTTCTTCCTTTCTCC...CAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR TCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTTTTCTCTGCCCCCACTaGAGATCCTCAGTGGTTTGC +
Preference number: 2 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVFLCPH*RSSVVC
Trigger: GCAAACCACTGAGGATCTTCAGTGGGGGCAGAGAAA...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000552276.5
3UTR-3UTR CCA 90 bp GGCATTGATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCAAGGCATGGGATCACTaGGTGCTAGACGGCTGGGTT +
Preference number: 2 (lower is better)
Translates to: GIDSTQCTNFPLGSILGFKAWDH*VLDGWV
Trigger: AACCCAGCCGTCTAGCACCCAGTGATCCCATGCCTT...GAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTATCAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp CACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATTCCCAAAGGCATaGGATCACTGGGTGCTAGAC +
Preference number: 2 (lower is better)
Translates to: HPMYKFPVGQHPGIPKGMGFPKA*DHWVLD
Trigger: GTCTAGCACCCAGTGATCCCATGCCTTTGGGAATCC...CATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
3UTR-3UTR GCA 90 bp TATGACCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGGAAGCTGCGGCACTTaGAGAGGGGAGTGGGCTGGA +
Preference number: 2 (lower is better)
Translates to: YDQIRVSENTYLGQVPESGSCGT*RGEWAG
Trigger: TCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCTTCC...GCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR GCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGGCTTCAGGAACACATaGACACGACGCCAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSGFRNT*TRRQGE
Trigger: TTCTCCTTGGCGTCGTGTGCATGTGTTCCTGAAGCC...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
3UTR-3UTR CCA 90 bp CAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATGGATTCCCAAAGGCATaGGATCACTGGGTGCTAGAC +
Preference number: 2 (lower is better)
Translates to: QCTNFPLGSILGFPKAWDGFPKA*DHWVLD
Trigger: GTCTAGCACCCAGTGATCCCATGCCTTTGGGAATCC...ATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp GGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTGAGGTAGTACAAATTTCCCGTTaGGCAGCATCCTGGGATTCC +
Preference number: 2 (lower is better)
Translates to: GTKWSPFPDTHNAIPSEVVQISR*AASWDS
Trigger: GGAATCCCAGGATGCTGCCCAACGGGAAATTTGTAC...TACCTCACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTACTGAAGATCCTCAGTaGTTTGCCCACCTCAGTCCT +
Preference number: 2 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVTEDPQ*FAHLSP
Trigger: AGGACTGAGGTGGGCAAACCACTGAGGATCTTCAGT...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
3UTR-3UTR TCA 90 bp TCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAACAATGCTATTCCCAGTaGGGTAATCTAGGAACTCTA +
Preference number: 2 (lower is better)
Translates to: SCSPFTTRSLVREASHGEQCYSQ*GNLGTL
Trigger: TAGAGTTCCTAGATTACCTCACTGGGAATAGCATTG...TTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp CAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGCTGGGCTGGAACCAAATaGAGCCCTTTTCCGGACACG +
Preference number: 2 (lower is better)
Translates to: QIRVSENTYLGQVPESVCWAGTK*SPFPDT
Trigger: CGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCA...GCAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp TGCCATCTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAAGGAGAGAGAGTACTTaGATCCACTGGAGAGTATGC +
Preference number: 2 (lower is better)
Translates to: CHLPHFNSVYWPKGKQLARREST*IHWRVC
Trigger: GCATACTCTCCAGTGGATCCAAGTACTCTCTCTCCT...TGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAGATGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR TCA 90 bp CCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGGCAAAAAGACAGCCATaGTGGGTCCGTCCTGATGAC +
Preference number: 2 (lower is better)
Translates to: PNKSVREYISWAGPRKRLAKRQP*WVRPDD
Trigger: GTCATCAGGACGGACCCATCATGGCTGTCTTTTTGC...CAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR TCA 90 bp TATGACCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGGTCACTTTGCTCTGTaGTGGCTGGTCCCTGTGATG +
Preference number: 2 (lower is better)
Translates to: YDQIRVSENTYLGQVPESGHFAL*WLVPVM
Trigger: CATCACAGGGACCAGCCATCACAGAGCAAAGTGACC...GCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGGTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CCA 90 bp TATGACCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCCTAAGGGCAAACAGCTaGCAGGAAGGTGGTGTCTTT +
Preference number: 2 (lower is better)
Translates to: YDQIRVSENTYLGQVPESLRANS*QEGGVF
Trigger: AAAGACACCACCTTCCTGCCAGCTGTTTGCCCTTAG...GCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGGTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR TCA 72 bp TCCAGGAGCTGTGGGCACACAGATCCGTTCCCCTTCTaGCTGCTGCTTCCACGCTTCGCCTCGGGTGGCTCC +
Preference number: 3 (lower is better)
Translates to: SRSCGHTDPFPF*LLLPRFASGGS
Trigger: GGAGCCACCCGAGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGAACGGATCTGTGTGCCCACAGCTCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552456.1
3UTR GCA 72 bp GCTGTGGGCACACAGATCCGTTCCCCTTCTGACTGCTaGTTCCACGCTTCGCCTCGGGTGGCTCCTGCAGCT +
Preference number: 3 (lower is better)
Translates to: AVGTQIRSPSDC*FHASPRVAPAA
Trigger: AGCTGCAGGAGCCACCCGAGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGAACGGATCTGTGTGCCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552456.1
3UTR GCA 72 bp GGAGCTGTGGGCACACAGATCCGTTCCCCTTCTGACTaGTGCTTCCACGCTTCGCCTCGGGTGGCTCCTGCA +
Preference number: 3 (lower is better)
Translates to: GAVGTQIRSPSD*CFHASPRVAPA
Trigger: TGCAGGAGCCACCCGAGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGAACGGATCTGTGTGCCCACAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552456.1
3UTR CCA 72 bp TGCTCTGAGGGAAGCTGCGGCACTTGCAGAGGGGAGTaGGCTGGAACCAAATGGAGCCCTTTTCCGGACACG +
Preference number: 3 (lower is better)
Translates to: CSEGSCGTCRGE*AGTKWSPFPDT
Trigger: CGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCTTCCCTCAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CAA 90 bp TGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTGGGAAGCTGCGGCACTaGCAGAGGGGAGTGGGCTGG +
Preference number: 3 (lower is better)
Translates to: WAGTKWSPFPDTHNAIPSGKLRH*QRGVGW
Trigger: CCAGCCCACTCCCCTCTGCAAGTGCCGCAGCTTCCC...ACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CAA 90 bp GGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTGAGGTAGGGAAGCTGCGGCACTaGCAGAGGGGAGTGGGCTGG +
Preference number: 3 (lower is better)
Translates to: GTKWSPFPDTHNAIPSEVGKLRH*QRGVGW
Trigger: CCAGCCCACTCCCCTCTGCAAGTGCCGCAGCTTCCC...TACCTCACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CAA 90 bp GTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAGACGTGGAGGTCACTTaGCTCTGTGATGGCTGGTCC +
Preference number: 3 (lower is better)
Translates to: VMFPIYNPFPSAGSQPRRDVEVT*LCDGWS
Trigger: GGACCAGCCATCACAGAGCAAAGTGACCTCCACGTC...TCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR CCA 72 bp TGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATaGAGCCCTTTTCCGGACACGCACAATGCTATTCCC +
Preference number: 3 (lower is better)
Translates to: CGTCRGEWAGTK*SPFPDTHNAIP
Trigger: GGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CAA 90 bp TGCCATCTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGACGTGGAGGTCACTTaGCTCTGTGATGGCTGGTCC +
Preference number: 3 (lower is better)
Translates to: CHLPHFNSVYWPKGKQLADVEVT*LCDGWS
Trigger: GGACCAGCCATCACAGAGCAAAGTGACCTCCACGTC...TGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAGATGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CAA 90 bp CACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGACGTGGAGGTCACTTaGCTCTGTGATGGCTGGTCC +
Preference number: 3 (lower is better)
Translates to: HPMYKFPVGQHPGIPKGMDVEVT*LCDGWS
Trigger: GGACCAGCCATCACAGAGCAAAGTGACCTCCACGTC...CATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
3UTR TCA 72 bp GAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTaGGGTAATCTAGGAACTCTACAGGGCACTGCGGTC +
Preference number: 3 (lower is better)
Translates to: EPFSGHAQCYSQ*GNLGTLQGTAV
Trigger: GACCGCAGTGCCCTGTAGAGTTCCTAGATTACCTCACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR GCA 72 bp TTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTATaGTCTGAGGGAAGCTGCGGCACTTGCAGAGGGGAG +
Preference number: 3 (lower is better)
Translates to: FRRESTWIHWRV*SEGSCGTCRGE
Trigger: CTCCCCTCTGCAAGTGCCGCAGCTTCCCTCAGAGCATACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CAA 90 bp ATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAAAGTGTACAAATTTCCCGTaGGGCAGCATCCTGGGATTC +
Preference number: 3 (lower is better)
Translates to: MFPIYNPFPSAGSQPRRKCTNFP*GSILGF
Trigger: GAATCCCAGGATGCTGCCCAACGGGAAATTTGTACA...CTTTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CAA 90 bp TCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAATGTACAAATTTCCCGTaGGGCAGCATCCTGGGATTC +
Preference number: 3 (lower is better)
Translates to: SCSPFTTRSLVREASHGECTNFP*GSILGF
Trigger: GAATCCCAGGATGCTGCCCAACGGGAAATTTGTACA...TTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CAA 90 bp TTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAACCCTGTGATGTGGCATaGATAGCACCCAATGTACAA +
Preference number: 3 (lower is better)
Translates to: LQRGVGWNQMEPFSGHAQPCDVA*IAPNVQ
Trigger: TTGTACATTGGGTGCTATCAATGCCACATCACAGGG...TTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CAA 90 bp CAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATGACGTGGAGGTCACTTaGCTCTGTGATGGCTGGTCC +
Preference number: 3 (lower is better)
Translates to: QCTNFPLGSILGFPKAWDDVEVT*LCDGWS
Trigger: GGACCAGCCATCACAGAGCAAAGTGACCTCCACGTC...ATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
3UTR TCA 72 bp AATCTAGGAACTCTACAGGGCACTGCGGTCCTTAGCTaGGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTC +
Preference number: 3 (lower is better)
Translates to: NLGTLQGTAVLS*GAQGLRKEVMF
Trigger: GAACATGACTTCCTTCCGGAGTCCTTGAGCACCTCAGCTAAGGACCGCAGTGCCCTGTAGAGTTCCTAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR GCA 72 bp AGACCTGTTAAATTCCGTTTCGGCTTCAGGAACACATaGACACGACGCCAAGGAGAAGCTGAGGCCATAGCG +
Preference number: 3 (lower is better)
Translates to: RPVKFRFGFRNT*TRRQGEAEAIA
Trigger: CGCTATGGCCTCAGCTTCTCCTTGGCGTCGTGTGCATGTGTTCCTGAAGCCGAAACGGAATTTAACAGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
3UTR-3UTR CAA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTAAGATCCTCAGTGGTTaGCCCACCTCAGTCCTCTCA +
Preference number: 3 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVKILSG*PTSVLS
Trigger: TGAGAGGACTGAGGTGGGCAAACCACTGAGGATCTT...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
3UTR-3UTR CAA 90 bp TGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTCCCTGTGATGTGGCATaGATAGCACCCAATGTACAA +
Preference number: 3 (lower is better)
Translates to: WAGTKWSPFPDTHNAIPSPCDVA*IAPNVQ
Trigger: TTGTACATTGGGTGCTATCAATGCCACATCACAGGG...ACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR-3UTR CAA 90 bp CTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGAAGGCCCTGTGATGTGGCATaGATAGCACCCAATGTACAA +
Preference number: 3 (lower is better)
Translates to: LPHFNSVYWPKGKQLAGRPCDVA*IAPNVQ
Trigger: TTGTACATTGGGTGCTATCAATGCCACATCACAGGG...CCTTCCTGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
3UTR CCA 72 bp GTGGCATTGATAGCACCCAATGTACAAATTTCCCGTTaGGCAGCATCCTGGGATTCCCAAAGGCATGGGATC +
Preference number: 3 (lower is better)
Translates to: VALIAPNVQISR*AASWDSQRHGI
Trigger: GATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTATCAATGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
3UTR-3UTR CAA 90 bp CCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGCAGAGAATACATATCTaGGGCAGGTCCCAGAAAGCG +
Preference number: 3 (lower is better)
Translates to: PNKSVREYISWAGPRKRLQRIHI*GRSQKA
Trigger: CGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTG...CAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp GCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACTGCGCCCGCTCAGCTaGAGCCCGGGGTGTCCGGCA +
Preference number: 4 (lower is better)
Translates to: AALAEGSGLEPNGALFRTLRPLS*SPGCPA
Trigger: TGCCGGACACCCCGGGCTGCAGCTGAGCGGGCGCAG...TGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225328.10
ENST00000345901.7
CDS-3UTR GCA 90 bp CTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAGCTCTCAGCCGGGCTTaGGGACCGCCCGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: LAEGSGLEPNGALFRTRTALSRA*GPPGPR
Trigger: ACGTGGGCCGGGCGGTCCGCAAGCCCGGCTGAGAGC...TGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
CDS-3UTR CCA 90 bp AGCTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGCCCACGTGCGCTCATaGGGAGCACTCGGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: SCGTCRGEWAGTKWSPFPAHVRS*GALGPS
Trigger: CGAGGGACCGAGTGCTCCCCATGAGCGCACGTGGGC...CGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
CDS-3UTR TCA 90 bp ACTGCTGCTTCCACGCTTCGCCTCGGGTGGCTCCTGCAGCTCCTGCTGCTCCGGGGTCACTTTGCTCTGTaGTGGCTGGTCCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: TAASTLRLGWLLQLLLLRGHFAL*WLVPVM
Trigger: CATCACAGGGACCAGCCATCACAGAGCAAAGTGACC...CCGGAGCAGCAGGAGCTGCAGGAGCCACCCGAGGCGAAGCGTGGAAGCAGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552456.1
CDS-3UTR GCA 90 bp TTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAACCCTTGCAGCCCGCCTaGCCCATGGCGCGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LQRGVGWNQMEPFSGHAQPLQPA*PMARSQ
Trigger: CTGAGAGCGCGCCATGGGGCAGGCGGGCTGCAAGGG...TTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp AGCTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGCCAGGATGGAGGCCTaGAGCAGCCGGTACAGCAGG +
Preference number: 4 (lower is better)
Translates to: SCGTCRGEWAGTKWSPFPARMEA*SSRYSR
Trigger: CCTGCTGTACCGGCTGCTGCAGGCCTCCATCCTGGC...CGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp GCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACAACGCTTCGCCTCGGGTaGCTCCTGCAGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AALAEGSGLEPNGALFRTTLRLG*LLQLLL
Trigger: CAGCAGGAGCTGCAGGAGCCACCCGAGGCGAAGCGT...TGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp GAGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCTGCGCCCGCTCAGCTaGAGCCCGGGGTGTCCGGCA +
Preference number: 4 (lower is better)
Translates to: EVLKDSGRKSCSPFTTRSLRPLS*SPGCPA
Trigger: TGCCGGACACCCCGGGCTGCAGCTGAGCGGGCGCAG...GGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225328.10
ENST00000345901.7
CDS-3UTR GCA 90 bp CAAAAAGACAGCCATGATGGGTCCGTCCTGATGACCCCAGCATCAGACGTGGAGCCCTTGCAGCCCGCCTaGCCCATGGCGCGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: QKDSHDGSVLMTPASDVEPLQPA*PMARSQ
Trigger: CTGAGAGCGCGCCATGGGGCAGGCGGGCTGCAAGGG...CTCCACGTCTGATGCTGGGGTCATCAGGACGGACCCATCATGGCTGTCTTTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp CTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGAGGCCCAGATGTGAGCTaGTCAGATAGCCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LRHLQRGVGWNQMEPFSGGPDVS*SDSPSP
Trigger: GGGGCTGGGGCTATCTGAGCAGCTCACATCTGGGCC...TCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp AAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTAGCCCGCCTGCCCCATaGCGCGCTCTCAGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: KFPVGQHPGIPKGMGSLGSPPAP*RALSRA
Trigger: AGCCCGGCTGAGAGCGCGCCATGGGGCAGGCGGGCT...ACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp GCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACAATGGCTCCTCCGGCCTaGAGCTTGTCTCCAACGGGC +
Preference number: 4 (lower is better)
Translates to: AALAEGSGLEPNGALFRTMAPPA*SLSPTG
Trigger: GCCCGTTGGAGACAAGCTCCAGGCCGGAGGAGCCAT...TGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp CTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGAGGCCTCCTTCAGGAATaGCTCCTCCGGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LRHLQRGVGWNQMEPFSGGLLQE*LLRPGA
Trigger: AGCTCCAGGCCGGAGGAGCCATTCCTGAAGGAGGCC...TCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR TCA 90 bp CCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGACGCCCTGGCCCAGATGTaGGCTGCTCAGATAGCCCCA +
Preference number: 4 (lower is better)
Translates to: PLGSILGFPKAWDHWVLDALAQM*AAQIAP
Trigger: TGGGGCTATCTGAGCAGCTCACATCTGGGCCAGGGC...GTCTAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR TCA 90 bp GCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACAGGAGAAAGGAAGAACTaGCGGCAGGGGGTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: AALAEGSGLEPNGALFRTGERKN*RQGVGQ
Trigger: TTGCCCCACCCCCTGCCGTCAGTTCTTCCTTTCTCC...TGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp GCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACAACTGCGGTCCTTAGCTaGGGTGCTCAAGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: AALAEGSGLEPNGALFRTTAVLS*GAQGLR
Trigger: CCGGAGTCCTTGAGCACCTCAGCTAAGGACCGCAGT...TGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp TGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACGCTCTCAGCCGGGCTTaGGGACCGCCCGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: CTNFPLGSILGFPKAWDHALSRA*GPPGPR
Trigger: ACGTGGGCCGGGCGGTCCGCAAGCCCGGCTGAGAGC...GTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
CDS-3UTR GCA 90 bp GGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTGAGGTAGCTCTCAGCCGGGCTTaGGGACCGCCCGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: GTKWSPFPDTHNAIPSEVALSRA*GPPGPR
Trigger: ACGTGGGCCGGGCGGTCCGCAAGCCCGGCTGAGAGC...TACCTCACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
CDS-3UTR GCA 90 bp ATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCGCCAGGATGGAGGCCTaGAGCAGCCGGTACAGCAGG +
Preference number: 4 (lower is better)
Translates to: ISRWAASWDSQRHGITGCARMEA*SSRYSR
Trigger: CCTGCTGTACCGGCTGCTGCAGGCCTCCATCCTGGC...GCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp CTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGATCCCCTTCTGACTGCTaGTTCCACGCTTCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LRHLQRGVGWNQMEPFSGSPSDC*FHASPR
Trigger: CCGAGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGA...TCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp AGCTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGTCCCCTTCTGACTGCTaGTTCCACGCTTCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: SCGTCRGEWAGTKWSPFPSPSDC*FHASPR
Trigger: CCGAGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGA...CGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp TTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAACCAGGTACGCCAGGATaGAGGCCTGCAGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: LQRGVGWNQMEPFSGHAQPGTPG*RPAAAG
Trigger: ACCGGCTGCTGCAGGCCTCCATCCTGGCGTACCTGG...TTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp AGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCAACCGCCCGGCCCACGTaGGCTCATGGGGAGCACTCG +
Preference number: 4 (lower is better)
Translates to: STQCTNFPLGSILGFPKATARPT*AHGEHS
Trigger: CGAGTGCTCCCCATGAGCGCACGTGGGCCGGGCGGT...TGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
CDS-3UTR GCA 90 bp GTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTACCGCCCGGCCCACGTaGGCTCATGGGGAGCACTCG +
Preference number: 4 (lower is better)
Translates to: VQISRWAASWDSQRHGITTARPT*AHGEHS
Trigger: CGAGTGCTCCCCATGAGCGCACGTGGGCCGGGCGGT...AGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
CDS-3UTR GCA 90 bp CACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGACCGCCCGGCCCACGTaGGCTCATGGGGAGCACTCG +
Preference number: 4 (lower is better)
Translates to: HPMYKFPVGQHPGIPKGMTARPT*AHGEHS
Trigger: CGAGTGCTCCCCATGAGCGCACGTGGGCCGGGCGGT...CATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
CDS-3UTR GCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGCTCTCAGCCGGGCTTaGGGACCGCCCGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSALSRA*GPPGPR
Trigger: ACGTGGGCCGGGCGGTCCGCAAGCCCGGCTGAGAGC...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR GCA 90 bp AGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCACCCTTGCAGCCCGCCTaGCCCATGGCGCGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: STQCTNFPLGSILGFPKAPLQPA*PMARSQ
Trigger: CTGAGAGCGCGCCATGGGGCAGGCGGGCTGCAAGGG...TGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTCCCTTGCAGCCCGCCTaGCCCATGGCGCGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVPLQPA*PMARSQ
Trigger: CTGAGAGCGCGCCATGGGGCAGGCGGGCTGCAAGGG...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR GCA 90 bp CCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGACAGGCAGAGCCCCTTaGAGCCCGCCTGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: PNVQISRWAASWDSQRHGTGRAP*SPPAPW
Trigger: CCATGGGGCAGGCGGGCTGCAAGGGGCTCTGCCTGT...CCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp AGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCACAGGCAGAGCCCCTTaGAGCCCGCCTGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: RCSRTPEGSHVPHLQPVPTGRAP*SPPAPW
Trigger: CCATGGGGCAGGCGGGCTGCAAGGGGCTCTGCCTGT...GGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp AATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGGCCAGGATGGAGGCCTaGAGCAGCCGGTACAGCAGG +
Preference number: 4 (lower is better)
Translates to: NFPLGSILGFPKAWDHWVARMEA*SSRYSR
Trigger: CCTGCTGTACCGGCTGCTGCAGGCCTCCATCCTGGC...CACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp CCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGACAGGCTTTCATCAGGGTaGGGAACTCCACCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: PLGSILGFPKAWDHWVLDRLSSG*GTPPRL
Trigger: CAGCCGGGGTGGAGTTCCGCACCCTGATGAAAGCCT...GTCTAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR GCA 90 bp CCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGATCCCCTTCTGACTGCTaGTTCCACGCTTCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: PVGQHPGIPKGMGSLGARSPSDC*FHASPR
Trigger: CCGAGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGA...TCTAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR GCA 90 bp AGCTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGCGTTCCCCTTCTGACTaGTGCTTCCACGCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: SCGTCRGEWAGTKWSPFPRSPSD*CFHASP
Trigger: AGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGAACG...CGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCAGGTACGCCAGGATaGAGGCCTGCAGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: RKEVMFPIYNPFPSAGSQPGTPG*RPAAAG
Trigger: ACCGGCTGCTGCAGGCCTCCATCCTGGCGTACCTGG...CTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp AGCTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGCGTTCTGCCGCTGGTTaGGGGTCACAATCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SCGTCRGEWAGTKWSPFPRSAAG*GSQSGW
Trigger: CCAACCTGATTGTGACCCCCAACCAGCGGCAGAACG...CGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225328.10
ENST00000547178.5
CDS-3UTR CCA 90 bp CTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAGGCAGTCGCTGTCCTTaGAGCACGCGCCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: LAEGSGLEPNGALFRTRTGSRCP*STRHQE
Trigger: TTCCTGATGGCGCGTGCTCCAAGGACAGCGACTGCC...TGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp ATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCATGGCTCCTCCGGCCTaGAGCTTGTCTCCAACGGGC +
Preference number: 4 (lower is better)
Translates to: ISRWAASWDSQRHGITGCMAPPA*SLSPTG
Trigger: GCCCGTTGGAGACAAGCTCCAGGCCGGAGGAGCCAT...GCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp CTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACATCCAGGGCTATATCCTaGAAGTCGCTCCCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LAEGSGLEPNGALFRTRTSRAIS*KSLPAQ
Trigger: CTGGGCCGGGAGCGACTTCCAGGATATAGCCCTGGA...TGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp GTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAGGGCTCCAGGAGCTGTaGGCACACAGATCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: VMFPIYNPFPSAGSQPRRGLQEL*AHRSVP
Trigger: GGGAACGGATCTGTGTGCCCACAGCTCCTGGAGCCC...TCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp CAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGGCCCTGGCCCAGATGTaGGCTGCTCAGATAGCCCCA +
Preference number: 4 (lower is better)
Translates to: QISRWAASWDSQRHGITGALAQM*AAQIAP
Trigger: TGGGGCTATCTGAGCAGCTCACATCTGGGCCAGGGC...CCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR TCA 90 bp AGCTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGATGGCTGGTCCCTGTaGTGTGGCATTGATAGCACC +
Preference number: 4 (lower is better)
Translates to: SCGTCRGEWAGTKWSPFPDGWSL*CGIDST
Trigger: GGTGCTATCAATGCCACATCACAGGGACCAGCCATC...CGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp CCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGACCATTCTGGGCTGGAATaGCGTAGTCGGCGACATCCC +
Preference number: 4 (lower is better)
Translates to: PLGSILGFPKAWDHWVLDHSGLE*RSRRHP
Trigger: GGGATGTCGCCGACTACGTCATTCCAGCCCAGAATG...GTCTAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345901.7
ENST00000551178.5
ENST00000552050.5
CDS-3UTR GCA 90 bp GGCATTGATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCCTTGCAGCCCGCCTaGCCCATGGCGCGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GIDSTQCTNFPLGSILGFPLQPA*PMARSQ
Trigger: CTGAGAGCGCGCCATGGGGCAGGCGGGCTGCAAGGG...GAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTATCAATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp AAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCCAGGATGGAGGCCTaGAGCAGCCGGTACAGCAGG +
Preference number: 4 (lower is better)
Translates to: KFPVGQHPGIPKGMGSLGARMEA*SSRYSR
Trigger: CCTGCTGTACCGGCTGCTGCAGGCCTCCATCCTGGC...ACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp GCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACAGTGATGACAGCACTCTaGAGGGAGGTGTCGACGTCT +
Preference number: 4 (lower is better)
Translates to: AALAEGSGLEPNGALFRTVMTAL*REVSTS
Trigger: AGACGTCGACACCTCCCTGCAGAGTGCTGTCATCAC...TGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp ATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAAAGGGCCCAGATGTGAGCTaGTCAGATAGCCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: MFPIYNPFPSAGSQPRRKGPDVS*SDSPSP
Trigger: GGGGCTGGGGCTATCTGAGCAGCTCACATCTGGGCC...CTTTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp TCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAAGGCCCAGATGTGAGCTaGTCAGATAGCCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SCSPFTTRSLVREASHGEGPDVS*SDSPSP
Trigger: GGGGCTGGGGCTATCTGAGCAGCTCACATCTGGGCC...TTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp CCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGACGTTCCCCTTCTGACTaGTGCTTCCACGCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: PVGQHPGIPKGMGSLGARRSPSD*CFHASP
Trigger: AGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGAACG...TCTAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp TGCCATCTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGCCCACGTGCGCTCATaGGGAGCACTCGGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: CHLPHFNSVYWPKGKQLAAHVRS*GALGPS
Trigger: CGAGGGACCGAGTGCTCCCCATGAGCGCACGTGGGC...TGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAGATGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
CDS-3UTR CCA 90 bp GGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCGGCCTCCTTCAGGAATaGCTCCTCCGGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GRKSCSPFTTRSLVREASGLLQE*LLRPGA
Trigger: AGCTCCAGGCCGGAGGAGCCATTCCTGAAGGAGGCC...GCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp CAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGGGCCTCCTTCAGGAATaGCTCCTCCGGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: QISRWAASWDSQRHGITGGLLQE*LLRPGA
Trigger: AGCTCCAGGCCGGAGGAGCCATTCCTGAAGGAGGCC...CCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp AGCTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGAGCCCAGTCGGAAGATaGGGCAGTAGTGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SCGTCRGEWAGTKWSPFPSPVGR*GSSGSW
Trigger: CCAAGAACCACTACTGCCCCATCTTCCGACTGGGCT...CGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp CTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGAAGGACGCTTCGCCTCGGGTaGCTCCTGCAGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LPHFNSVYWPKGKQLAGRTLRLG*LLQLLL
Trigger: CAGCAGGAGCTGCAGGAGCCACCCGAGGCGAAGCGT...CCTTCCTGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGGGGCTCCAGGAGCTGTaGGCACACAGATCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: QISRWAASWDSQRHGITGGLQEL*AHRSVP
Trigger: GGGAACGGATCTGTGTGCCCACAGCTCCTGGAGCCC...CCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp TTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAATTCACGTGCTCCTGTaGGGCTCCAGGAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: FPLGSILGFPKAWDHWVLIHVLL*GSRSCG
Trigger: CCCACAGCTCCTGGAGCCCCACAGGAGCACGTGAAT...TAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp ATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCATTCACGTGCTCCTGTaGGGCTCCAGGAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: ISRWAASWDSQRHGITGCIHVLL*GSRSCG
Trigger: CCCACAGCTCCTGGAGCCCCACAGGAGCACGTGAAT...GCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp AGCTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGAAGGCATGGGATCACTaGGTGCTAGACGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: SCGTCRGEWAGTKWSPFPKAWDH*VLDGWV
Trigger: AACCCAGCCGTCTAGCACCCAGTGATCCCATGCCTT...CGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGATGGGCTGGAACCAAATaGAGCCCTTTTCCGGACACG +
Preference number: 4 (lower is better)
Translates to: LRHLQRGVGWNQMEPFSGWAGTK*SPFPDT
Trigger: CGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCA...TCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp CCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGCTCCCTGGGCTGGAATaGCGTAGTCGGCGACATCCC +
Preference number: 4 (lower is better)
Translates to: PNVQISRWAASWDSQRHGLPGLE*RSRRHP
Trigger: GGGATGTCGCCGACTACGTCATTCCAGCCCAGGGAG...CCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225328.10
ENST00000547178.5
CDS-3UTR TCA 90 bp TGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTGCCCTGGCCCAGATGTaGGCTGCTCAGATAGCCCCA +
Preference number: 4 (lower is better)
Translates to: WAGTKWSPFPDTHNAIPSALAQM*AAQIAP
Trigger: TGGGGCTATCTGAGCAGCTCACATCTGGGCCAGGGC...ACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp AGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATGGAGAAAGGAAGAACTaGCGGCAGGGGGTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: RGVGWNQMEPFSGHAQCYGERKN*RQGVGQ
Trigger: TTGCCCCACCCCCTGCCGTCAGTTCTTCCTTTCTCC...ATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp ATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCCTGGAGAGTATGCTCTaGGGGAAGCTGCGGCACTTG +
Preference number: 4 (lower is better)
Translates to: ISRWAASWDSQRHGITGCLESML*GKLRHL
Trigger: CAAGTGCCGCAGCTTCCCTCAGAGCATACTCTCCAG...GCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp GTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGACTGGAGAGTATGCTCTaGGGGAAGCTGCGGCACTTG +
Preference number: 4 (lower is better)
Translates to: VMFPIYNPFPSAGSQPRRLESML*GKLRHL
Trigger: CAAGTGCCGCAGCTTCCCTCAGAGCATACTCTCCAG...TCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp ATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCGCTCCCACTGCTGACTaGAACCCAGTCCTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: ISRWAASWDSQRHGITGCAPTAD*NPVLQA
Trigger: TGCTTGCAGGACTGGGTTTCAGTCAGCAGTGGGAGC...GCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552050.5
CDS-3UTR GCA 90 bp CAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATACAGGCAGAGCCCCTTaGAGCCCGCCTGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: QCTNFPLGSILGFPKAWDTGRAP*SPPAPW
Trigger: CCATGGGGCAGGCGGGCTGCAAGGGGCTCTGCCTGT...ATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp TGGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTAACAGGCAGAGCCCCTTaGAGCCCGCCTGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: WQEGGVFRRESTWIHWRVTGRAP*SPPAPW
Trigger: CCATGGGGCAGGCGGGCTGCAAGGGGCTCTGCCTGT...TACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCACAGGCAGAGCCCCTTaGAGCCCGCCTGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSTGRAP*SPPAPW
Trigger: CCATGGGGCAGGCGGGCTGCAAGGGGCTCTGCCTGT...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR GCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTGCCAGGATGGAGGCCTaGAGCAGCCGGTACAGCAGG +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVARMEA*SSRYSR
Trigger: CCTGCTGTACCGGCTGCTGCAGGCCTCCATCCTGGC...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR GCA 90 bp ATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCGAACTCCACCCCGGCTaGGTCTCGGTAATATCTGGC +
Preference number: 4 (lower is better)
Translates to: ISRWAASWDSQRHGITGCELHPG*VSVISG
Trigger: GCCAGATATTACCGAGACGCAGCCGGGGTGGAGTTC...GCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR GCA 90 bp GTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGAGGCTTTCATCAGGGTaGGGAACTCCACCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: VGWNQMEPFSGHAQCYSQRLSSG*GTPPRL
Trigger: CAGCCGGGGTGGAGTTCCGCACCCTGATGAAAGCCT...CTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp ACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGGCCCAGATGTGAGCTaGTCAGATAGCCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TNFPLGSILGFPKAWDHWGPDVS*SDSPSP
Trigger: GGGGCTGGGGCTATCTGAGCAGCTCACATCTGGGCC...CCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR GCA 90 bp CTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGAAGGGGCCCAGATGTGAGCTaGTCAGATAGCCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LPHFNSVYWPKGKQLAGRGPDVS*SDSPSP
Trigger: GGGGCTGGGGCTATCTGAGCAGCTCACATCTGGGCC...CCTTCCTGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp TCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAATCCCCTTCTGACTGCTaGTTCCACGCTTCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: SCSPFTTRSLVREASHGESPSDC*FHASPR
Trigger: CCGAGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGA...TTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp AGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCGGAAGCTGCGGCACTTaGAGAGGGGAGTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RCSRTPEGSHVPHLQPVPGSCGT*RGEWAG
Trigger: TCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCTTCC...GGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp AAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGGAAGCTGCGGCACTTaGAGAGGGGAGTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: KFPVGQHPGIPKGMGSLGGSCGT*RGEWAG
Trigger: TCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCTTCC...ACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp TGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTGGAAGCTGCGGCACTTaGAGAGGGGAGTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: WAGTKWSPFPDTHNAIPSGSCGT*RGEWAG
Trigger: TCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCTTCC...ACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp CAAAAAGACAGCCATGATGGGTCCGTCCTGATGACCCCAGCATCAGACGTGGAGTGCTCTGAGGGAAGCTaGGGCACTTGCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: QKDSHDGSVLMTPASDVECSEGS*GTCRGE
Trigger: CTCCCCTCTGCAAGTGCCGCAGCTTCCCTCAGAGCA...CTCCACGTCTGATGCTGGGGTCATCAGGACGGACCCATCATGGCTGTCTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp ATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAAAGTGCTCTGAGGGAAGCTaGGGCACTTGCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: MFPIYNPFPSAGSQPRRKCSEGS*GTCRGE
Trigger: CTCCCCTCTGCAAGTGCCGCAGCTTCCCTCAGAGCA...CTTTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp CCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGACATCCACTGGAGAGTATaGTCTGAGGGAAGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: PLGSILGFPKAWDHWVLDIHWRV*SEGSCG
Trigger: GCCGCAGCTTCCCTCAGAGCATACTCTCCAGTGGAT...GTCTAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGCCCACGTGCGCTCATaGGGAGCACTCGGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSAHVRS*GALGPS
Trigger: CGAGGGACCGAGTGCTCCCCATGAGCGCACGTGGGC...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CCA 90 bp GGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTGAGGTACCAGGTACGCCAGGATaGAGGCCTGCAGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: GTKWSPFPDTHNAIPSEVPGTPG*RPAAAG
Trigger: ACCGGCTGCTGCAGGCCTCCATCCTGGCGTACCTGG...TACCTCACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp CACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGCCAGGTACGCCAGGATaGAGGCCTGCAGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: HPMYKFPVGQHPGIPKGMPGTPG*RPAAAG
Trigger: ACCGGCTGCTGCAGGCCTCCATCCTGGCGTACCTGG...CATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTCCAGGTACGCCAGGATaGAGGCCTGCAGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVPGTPG*RPAAAG
Trigger: ACCGGCTGCTGCAGGCCTCCATCCTGGCGTACCTGG...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CCA 90 bp GTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGGGCAGTCGCTGTCCTTaGAGCACGCGCCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: VGWNQMEPFSGHAQCYSQGSRCP*STRHQE
Trigger: TTCCTGATGGCGCGTGCTCCAAGGACAGCGACTGCC...CTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp GAGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCACCGCTTCCCCAGCGTaGCAGTCGCTGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: EVLKDSGRKSCSPFTTRSTASPA*QSLSLE
Trigger: CTCCAAGGACAGCGACTGCCACGCTGGGGAAGCGGT...GGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp TTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTATCTCACAGGTGCCCCTaGCCAAGTTCTCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: FPLGSILGFPKAWDHWVLSHRCP*PSSLSA
Trigger: TGCGGAGAGAGAACTTGGCCAGGGGCACCTGTGAGA...TAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp CTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGAAGGATGGCTCCTCCGGCCTaGAGCTTGTCTCCAACGGGC +
Preference number: 4 (lower is better)
Translates to: LPHFNSVYWPKGKQLAGRMAPPA*SLSPTG
Trigger: GCCCGTTGGAGACAAGCTCCAGGCCGGAGGAGCCAT...CCTTCCTGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp AGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCAGGGCTATATCCTaGAAGTCGCTCCCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RGVGWNQMEPFSGHAQCYSRAIS*KSLPAQ
Trigger: CTGGGCCGGGAGCGACTTCCAGGATATAGCCCTGGA...ATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp AGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCGTCCTCGGCCTCCTaGGAACTGTCTTCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: RGVGWNQMEPFSGHAQCYSSSAS*ELSSRP
Trigger: GGGCCTAGAAGACAGTTCCCAGGAGGCCGAGGACGA...ATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp TCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAATCGTCCTCGGCCTCCTaGGAACTGTCTTCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: SCSPFTTRSLVREASHGESSSAS*ELSSRP
Trigger: GGGCCTAGAAGACAGTTCCCAGGAGGCCGAGGACGA...TTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAAAGGAAGAATCGTCCTCGGCCTCCTaGGAACTGTCTTCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: PIYNPFPSAGSQPRRKEESSSAS*ELSSRP
Trigger: GGGCCTAGAAGACAGTTCCCAGGAGGCCGAGGACGA...TTCTTCCTTTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp AGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCAACGCTTCGCCTCGGGTaGCTCCTGCAGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: STQCTNFPLGSILGFPKATLRLG*LLQLLL
Trigger: CAGCAGGAGCTGCAGGAGCCACCCGAGGCGAAGCGT...TGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTACGCTTCGCCTCGGGTaGCTCCTGCAGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVTLRLG*LLQLLL
Trigger: CAGCAGGAGCTGCAGGAGCCACCCGAGGCGAAGCGT...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CCA 90 bp TGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTGGGCTCCAGGAGCTGTaGGCACACAGATCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: WAGTKWSPFPDTHNAIPSGLQEL*AHRSVP
Trigger: GGGAACGGATCTGTGTGCCCACAGCTCCTGGAGCCC...ACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp GAGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCGGGCTCCAGGAGCTGTaGGCACACAGATCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: EVLKDSGRKSCSPFTTRSGLQEL*AHRSVP
Trigger: GGGAACGGATCTGTGTGCCCACAGCTCCTGGAGCCC...GGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGACAGAGGGGAGTGGGCTaGAACCAAATGGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PVGQHPGIPKGMGSLGARQRGVG*NQMEPF
Trigger: AAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTG...TCTAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp AATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCATCAGCCACTCTGCTaGCTTCGGGGAGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: NFPLGSILGFPKAWDHWVHQPLC*LRGASP
Trigger: TGGGGAAGCTCCCCGAAGCCAGCAGAGTGGCTGATG...CACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552050.5
CDS-3UTR CCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTGGAGTCCTCAGCCTGTaGGGCTCCAGGAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVGVLSL*GSRSCG
Trigger: CCCACAGCTCCTGGAGCCCCACAGGCTGAGGACTCC...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR TCA 90 bp GGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTGAGGTACTCCCTGGGCTGGAATaGCGTAGTCGGCGACATCCC +
Preference number: 4 (lower is better)
Translates to: GTKWSPFPDTHNAIPSEVLPGLE*RSRRHP
Trigger: GGGATGTCGCCGACTACGTCATTCCAGCCCAGGGAG...TACCTCACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225328.10
ENST00000547178.5
CDS-3UTR TCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTCTCCCTGGGCTGGAATaGCGTAGTCGGCGACATCCC +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVLPGLE*RSRRHP
Trigger: GGGATGTCGCCGACTACGTCATTCCAGCCCAGGGAG...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR TCA 90 bp TGCCATCTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGCCCTGGCCCAGATGTaGGCTGCTCAGATAGCCCCA +
Preference number: 4 (lower is better)
Translates to: CHLPHFNSVYWPKGKQLAALAQM*AAQIAP
Trigger: TGGGGCTATCTGAGCAGCTCACATCTGGGCCAGGGC...TGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAGATGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTGCCCTGGCCCAGATGTaGGCTGCTCAGATAGCCCCA +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVALAQM*AAQIAP
Trigger: TGGGGCTATCTGAGCAGCTCACATCTGGGCCAGGGC...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR TCA 90 bp GGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTGAGGTAGCCCTGGCCCAGATGTaGGCTGCTCAGATAGCCCCA +
Preference number: 4 (lower is better)
Translates to: GTKWSPFPDTHNAIPSEVALAQM*AAQIAP
Trigger: TGGGGCTATCTGAGCAGCTCACATCTGGGCCAGGGC...TACCTCACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp CGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGGATCCGTTCCCCTTCTaGCTGCTGCTTCCACGCTTC +
Preference number: 4 (lower is better)
Translates to: RKEVMFPIYNPFPSAGSQDPFPF*LLLPRF
Trigger: GAAGCGTGGAAGCAGCAGTCAGAAGGGGAACGGATC...CTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp CCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGGGAGAAAGGAAGAACTaGCGGCAGGGGGTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: PNVQISRWAASWDSQRHGGERKN*RQGVGQ
Trigger: TTGCCCCACCCCCTGCCGTCAGTTCTTCCTTTCTCC...CCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR TCA 90 bp TGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTACTGCGGTCCTTAGCTaGGGTGCTCAAGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: WAGTKWSPFPDTHNAIPSTAVLS*GAQGLR
Trigger: CCGGAGTCCTTGAGCACCTCAGCTAAGGACCGCAGT...ACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTACGCCAAGGAGAAGCTaGGGCCATAGCGTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVTPRRS*GHSVAP
Trigger: GGGGGCAACGCTATGGCCTCAGCTTCTCCTTGGCGT...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR GCA 90 bp AATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGGAACTCCACCCCGGCTaGGTCTCGGTAATATCTGGC +
Preference number: 4 (lower is better)
Translates to: NFPLGSILGFPKAWDHWVELHPG*VSVISG
Trigger: GCCAGATATTACCGAGACGCAGCCGGGGTGGAGTTC...CACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR GCA 90 bp GTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGGAACTCCACCCCGGCTaGGTCTCGGTAATATCTGGC +
Preference number: 4 (lower is better)
Translates to: VGWNQMEPFSGHAQCYSQELHPG*VSVISG
Trigger: GCCAGATATTACCGAGACGCAGCCGGGGTGGAGTTC...CTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp TGCCATCTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGCCCAGATGTGAGCTaGTCAGATAGCCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: CHLPHFNSVYWPKGKQLAGPDVS*SDSPSP
Trigger: GGGGCTGGGGCTATCTGAGCAGCTCACATCTGGGCC...TGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAGATGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp AAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTTCCCCTTCTGACTGCTaGTTCCACGCTTCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: KFPVGQHPGIPKGMGSLGSPSDC*FHASPR
Trigger: CCGAGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGA...ACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR GCA 90 bp ATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCACGTGGAGGTCACTTTaGTCTGTGATGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: ISRWAASWDSQRHGITGCTWRSL*SVMAGP
Trigger: GGGACCAGCCATCACAGAGCAAAGTGACCTCCACGT...GCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR GCA 90 bp GCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGAAGCTGCGGCACTTaGAGAGGGGAGTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: APNVQISRWAASWDSQRHGSCGT*RGEWAG
Trigger: TCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCTTCC...ATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp AGCTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGTCCCAGAAAGCGTCTaGCATCTCCCCCACTTTAAT +
Preference number: 4 (lower is better)
Translates to: SCGTCRGEWAGTKWSPFPVPESV*HLPHFN
Trigger: ATTAAAGTGGGGGAGATGGCAGACGCTTTCTGGGAC...CGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGGTTCTCTCCCTGGGCTaGAATGACGTAGTCGGCGAC +
Preference number: 4 (lower is better)
Translates to: QISRWAASWDSQRHGITGVLSLG*NDVVGD
Trigger: GTCGCCGACTACGTCATTCCAGCCCAGGGAGAGAAC...CCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225328.10
ENST00000547178.5
CDS-3UTR CCA 90 bp TGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACACCGCTTCCCCAGCGTaGCAGTCGCTGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: CTNFPLGSILGFPKAWDHTASPA*QSLSLE
Trigger: CTCCAAGGACAGCGACTGCCACGCTGGGGAAGCGGT...GTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp GCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATACCGCTTCCCCAGCGTaGCAGTCGCTGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: APNVQISRWAASWDSQRHTASPA*QSLSLE
Trigger: CTCCAAGGACAGCGACTGCCACGCTGGGGAAGCGGT...ATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp CATCTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGAACCGCTTCCCCAGCGTaGCAGTCGCTGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: HLPHFNSVYWPKGKQLAGTASPA*QSLSLE
Trigger: CTCCAAGGACAGCGACTGCCACGCTGGGGAAGCGGT...TCCTGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp GTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTACCGCTTCCCCAGCGTaGCAGTCGCTGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: VQISRWAASWDSQRHGITTASPA*QSLSLE
Trigger: CTCCAAGGACAGCGACTGCCACGCTGGGGAAGCGGT...AGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp CGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGTCTCACAGGTGCCCCTaGCCAAGTTCTCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: RKEVMFPIYNPFPSAGSQSHRCP*PSSLSA
Trigger: TGCGGAGAGAGAACTTGGCCAGGGGCACCTGTGAGA...CTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp GGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCTCTCACAGGTGCCCCTaGCCAAGTTCTCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: GRKSCSPFTTRSLVREASSHRCP*PSSLSA
Trigger: TGCGGAGAGAGAACTTGGCCAGGGGCACCTGTGAGA...GCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp TCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAATCTCACAGGTGCCCCTaGCCAAGTTCTCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: SCSPFTTRSLVREASHGESHRCP*PSSLSA
Trigger: TGCGGAGAGAGAACTTGGCCAGGGGCACCTGTGAGA...TTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp GCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATATGGCTCCTCCGGCCTaGAGCTTGTCTCCAACGGGC +
Preference number: 4 (lower is better)
Translates to: APNVQISRWAASWDSQRHMAPPA*SLSPTG
Trigger: GCCCGTTGGAGACAAGCTCCAGGCCGGAGGAGCCAT...ATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp AGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCTCCAGGGCTATATCCTaGAAGTCGCTCCCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RCSRTPEGSHVPHLQPVPSRAIS*KSLPAQ
Trigger: CTGGGCCGGGAGCGACTTCCAGGATATAGCCCTGGA...GGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp CTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGAAGGTCGTCCTCGGCCTCCTaGGAACTGTCTTCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: LPHFNSVYWPKGKQLAGRSSSAS*ELSSRP
Trigger: GGGCCTAGAAGACAGTTCCCAGGAGGCCGAGGACGA...CCTTCCTGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp ACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGTCGTCCTCGGCCTCCTaGGAACTGTCTTCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: TNFPLGSILGFPKAWDHWSSSAS*ELSSRP
Trigger: GGGCCTAGAAGACAGTTCCCAGGAGGCCGAGGACGA...CCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp ATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGACGCTTCGCCTCGGGTaGCTCCTGCAGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: IAPNVQISRWAASWDSQRTLRLG*LLQLLL
Trigger: CAGCAGGAGCTGCAGGAGCCACCCGAGGCGAAGCGT...CCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp AGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCAGGGCTCCAGGAGCTGTaGGCACACAGATCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: STQCTNFPLGSILGFPKAGLQEL*AHRSVP
Trigger: GGGAACGGATCTGTGTGCCCACAGCTCCTGGAGCCC...TGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTGGGCTCCAGGAGCTGTaGGCACACAGATCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVGLQEL*AHRSVP
Trigger: GGGAACGGATCTGTGTGCCCACAGCTCCTGGAGCCC...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CCA 90 bp AAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTATTCACGTGCTCCTGTaGGGCTCCAGGAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: KFPVGQHPGIPKGMGSLGIHVLL*GSRSCG
Trigger: CCCACAGCTCCTGGAGCCCCACAGGAGCACGTGAAT...ACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp TTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAACCCCAGCATCAGACGTaGAGGTCACTTTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LQRGVGWNQMEPFSGHAQPQHQT*RSLCSV
Trigger: CACAGAGCAAAGTGACCTCCACGTCTGATGCTGGGG...TTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp TTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTACCCCAGCATCAGACGTaGAGGTCACTTTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: FPLGSILGFPKAWDHWVLPQHQT*RSLCSV
Trigger: CACAGAGCAAAGTGACCTCCACGTCTGATGCTGGGG...TAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGACTGACGGCAGGGGGTaGGGCAAAAAGACAGCCATG +
Preference number: 4 (lower is better)
Translates to: RKEVMFPIYNPFPSAGSQTDGRG*GKKTAM
Trigger: CATGGCTGTCTTTTTGCCCCACCCCCTGCCGTCAGT...CTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp GGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCACTGACGGCAGGGGGTaGGGCAAAAAGACAGCCATG +
Preference number: 4 (lower is better)
Translates to: GRKSCSPFTTRSLVREASTDGRG*GKKTAM
Trigger: CATGGCTGTCTTTTTGCCCCACCCCCTGCCGTCAGT...GCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp TTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGGGCTGGAACCAAATaGAGCCCTTTTCCGGACACG +
Preference number: 4 (lower is better)
Translates to: LQRGVGWNQMEPFSGHAQWAGTK*SPFPDT
Trigger: CGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCA...TTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp GTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGATGGGCTGGAACCAAATaGAGCCCTTTTCCGGACACG +
Preference number: 4 (lower is better)
Translates to: VMFPIYNPFPSAGSQPRRWAGTK*SPFPDT
Trigger: CGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCA...TCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp TTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAACTTGCAGAGGGGAGTaGGCTGGAACCAAATGGAGC +
Preference number: 4 (lower is better)
Translates to: FPLGSILGFPKAWDHWVLTCRGE*AGTKWS
Trigger: GCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGT...TAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp TTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAAGCCTTCATTCTGGGCTaGAATGACGTAGTCGGCGAC +
Preference number: 4 (lower is better)
Translates to: LQRGVGWNQMEPFSGHAQAFILG*NDVVGD
Trigger: GTCGCCGACTACGTCATTCCAGCCCAGAATGAAGGC...TTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345901.7
ENST00000551178.5
CDS-3UTR CCA 90 bp AGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCAAAGGGGGCCGGTACGTaGGCATCAGCCACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: STQCTNFPLGSILGFPKAKGAGT*ASATLL
Trigger: CAGCAGAGTGGCTGATGCCCACGTACCGGCCCCCTT...TGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552050.5
CDS-3UTR TCA 90 bp CCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGGATCCGTTCCCCTTCTaGCTGCTGCTTCCACGCTTC +
Preference number: 4 (lower is better)
Translates to: PNVQISRWAASWDSQRHGDPFPF*LLLPRF
Trigger: GAAGCGTGGAAGCAGCAGTCAGAAGGGGAACGGATC...CCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR TCA 90 bp AGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATGATGGCTGGTCCCTGTaGTGTGGCATTGATAGCACC +
Preference number: 4 (lower is better)
Translates to: RGVGWNQMEPFSGHAQCYDGWSL*CGIDST
Trigger: GGTGCTATCAATGCCACATCACAGGGACCAGCCATC...ATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp CGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGGGTCACTTTGCTCTGTaGTGGCTGGTCCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: RKEVMFPIYNPFPSAGSQGHFAL*WLVPVM
Trigger: CATCACAGGGACCAGCCATCACAGAGCAAAGTGACC...CTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp ATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCGCAAAAAGACAGCCATaGTGGGTCCGTCCTGATGAC +
Preference number: 4 (lower is better)
Translates to: ISRWAASWDSQRHGITGCAKRQP*WVRPDD
Trigger: GTCATCAGGACGGACCCATCATGGCTGTCTTTTTGC...GCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR TCA 90 bp GGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTGAGGTAGGAGAAAGGAAGAACTaGCGGCAGGGGGTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: GTKWSPFPDTHNAIPSEVGERKN*RQGVGQ
Trigger: TTGCCCCACCCCCTGCCGTCAGTTCTTCCTTTCTCC...TACCTCACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp CATCTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGAACTGCGGTCCTTAGCTaGGGTGCTCAAGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: HLPHFNSVYWPKGKQLAGTAVLS*GAQGLR
Trigger: CCGGAGTCCTTGAGCACCTCAGCTAAGGACCGCAGT...TCCTGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp CACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGACTGCGGTCCTTAGCTaGGGTGCTCAAGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: HPMYKFPVGQHPGIPKGMTAVLS*GAQGLR
Trigger: CCGGAGTCCTTGAGCACCTCAGCTAAGGACCGCAGT...CATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp CTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGAAGGCTGGAGAGTATGCTCTaGGGGAAGCTGCGGCACTTG +
Preference number: 4 (lower is better)
Translates to: LPHFNSVYWPKGKQLAGRLESML*GKLRHL
Trigger: CAAGTGCCGCAGCTTCCCTCAGAGCATACTCTCCAG...CCTTCCTGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp CAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGGTGATGACAGCACTCTaGAGGGAGGTGTCGACGTCT +
Preference number: 4 (lower is better)
Translates to: QISRWAASWDSQRHGITGVMTAL*REVSTS
Trigger: AGACGTCGACACCTCCCTGCAGAGTGCTGTCATCAC...CCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR GCA 90 bp CCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGGAACTCCACCCCGGCTaGGTCTCGGTAATATCTGGC +
Preference number: 4 (lower is better)
Translates to: PNVQISRWAASWDSQRHGELHPG*VSVISG
Trigger: GCCAGATATTACCGAGACGCAGCCGGGGTGGAGTTC...CCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR GCA 90 bp ACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGAACTCCACCCCGGCTaGGTCTCGGTAATATCTGGC +
Preference number: 4 (lower is better)
Translates to: TNFPLGSILGFPKAWDHWELHPG*VSVISG
Trigger: GCCAGATATTACCGAGACGCAGCCGGGGTGGAGTTC...CCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR GCA 90 bp CACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGAGGCTTTCATCAGGGTaGGGAACTCCACCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: HPMYKFPVGQHPGIPKGMRLSSG*GTPPRL
Trigger: CAGCCGGGGTGGAGTTCCGCACCCTGATGAAAGCCT...CATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR GCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTAGGCTTTCATCAGGGTaGGGAACTCCACCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVRLSSG*GTPPRL
Trigger: CAGCCGGGGTGGAGTTCCGCACCCTGATGAAAGCCT...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR GCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGGCCCAGATGTGAGCTaGTCAGATAGCCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSGPDVS*SDSPSP
Trigger: GGGGCTGGGGCTATCTGAGCAGCTCACATCTGGGCC...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR GCA 90 bp ACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGCGTTCCCCTTCTGACTaGTGCTTCCACGCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: TNFPLGSILGFPKAWDHWRSPSD*CFHASP
Trigger: AGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGAACG...CCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR GCA 90 bp ATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAAAGATCCACTGGAGAGTATaGTCTGAGGGAAGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: MFPIYNPFPSAGSQPRRKIHWRV*SEGSCG
Trigger: GCCGCAGCTTCCCTCAGAGCATACTCTCCAGTGGAT...CTTTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp CAAAAAGACAGCCATGATGGGTCCGTCCTGATGACCCCAGCATCAGACGTGGAGATCCACTGGAGAGTATaGTCTGAGGGAAGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: QKDSHDGSVLMTPASDVEIHWRV*SEGSCG
Trigger: GCCGCAGCTTCCCTCAGAGCATACTCTCCAGTGGAT...CTCCACGTCTGATGCTGGGGTCATCAGGACGGACCCATCATGGCTGTCTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp TTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAACGCGCCATCAGGAATaGCTTCATTCTGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: FPLGSILGFPKAWDHWVLTRHQE*LHSGLE
Trigger: TTCCAGCCCAGAATGAAGGCATTCCTGATGGCGCGT...TAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345901.7
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp CAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGCGCCCACGTGCGCTCATaGGGAGCACTCGGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: QIRVSENTYLGQVPESVCAHVRS*GALGPS
Trigger: CGAGGGACCGAGTGCTCCCCATGAGCGCACGTGGGC...GCAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
CDS-3UTR CCA 90 bp AGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCGTTCTCTCCCTGGGCTaGAATGACGTAGTCGGCGAC +
Preference number: 4 (lower is better)
Translates to: RCSRTPEGSHVPHLQPVPVLSLG*NDVVGD
Trigger: GTCGCCGACTACGTCATTCCAGCCCAGGGAGAGAAC...GGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225328.10
ENST00000547178.5
CDS-3UTR CCA 90 bp GTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGCAGTCGCTGTCCTTaGAGCACGCGCCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: VQISRWAASWDSQRHGITGSRCP*STRHQE
Trigger: TTCCTGATGGCGCGTGCTCCAAGGACAGCGACTGCC...AGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCACCGCTTCCCCAGCGTaGCAGTCGCTGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSTASPA*QSLSLE
Trigger: CTCCAAGGACAGCGACTGCCACGCTGGGGAAGCGGT...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CCA 90 bp ACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGTCTCACAGGTGCCCCTaGCCAAGTTCTCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: TNFPLGSILGFPKAWDHWSHRCP*PSSLSA
Trigger: TGCGGAGAGAGAACTTGGCCAGGGGCACCTGTGAGA...CCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp CAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATATGGCTCCTCCGGCCTaGAGCTTGTCTCCAACGGGC +
Preference number: 4 (lower is better)
Translates to: QCTNFPLGSILGFPKAWDMAPPA*SLSPTG
Trigger: GCCCGTTGGAGACAAGCTCCAGGCCGGAGGAGCCAT...ATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCATGGCTCCTCCGGCCTaGAGCTTGTCTCCAACGGGC +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSMAPPA*SLSPTG
Trigger: GCCCGTTGGAGACAAGCTCCAGGCCGGAGGAGCCAT...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CCA 90 bp ATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCAGGCCTCCTTCAGGAATaGCTCCTCCGGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: MYKFPVGQHPGIPKGMGSGLLQE*LLRPGA
Trigger: AGCTCCAGGCCGGAGGAGCCATTCCTGAAGGAGGCC...TGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp GCTGGTCCCTGTGATGTGGCATTGATAGCACCCAATGTACAAATTTCCCGTTGGGGCCTCCTTCAGGAATaGCTCCTCCGGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: AGPCDVALIAPNVQISRWGLLQE*LLRPGA
Trigger: AGCTCCAGGCCGGAGGAGCCATTCCTGAAGGAGGCC...CCAACGGGAAATTTGTACATTGGGTGCTATCAATGCCACATCACAGGGACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGGCCTCCTTCAGGAATaGCTCCTCCGGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSGLLQE*LLRPGA
Trigger: AGCTCCAGGCCGGAGGAGCCATTCCTGAAGGAGGCC...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CCA 90 bp TCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAAAGCCCAGTCGGAAGATaGGGCAGTAGTGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SCSPFTTRSLVREASHGESPVGR*GSSGSW
Trigger: CCAAGAACCACTACTGCCCCATCTTCCGACTGGGCT...TTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp CAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGAGCCCAGTCGGAAGATaGGGCAGTAGTGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: QISRWAASWDSQRHGITGSPVGR*GSSGSW
Trigger: CCAAGAACCACTACTGCCCCATCTTCCGACTGGGCT...CCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp GTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTTCCAGGGCTATATCCTaGAAGTCGCTCCCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VQISRWAASWDSQRHGITSRAIS*KSLPAQ
Trigger: CTGGGCCGGGAGCGACTTCCAGGATATAGCCCTGGA...AGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTTCGTCCTCGGCCTCCTaGGAACTGTCTTCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVSSSAS*ELSSRP
Trigger: GGGCCTAGAAGACAGTTCCCAGGAGGCCGAGGACGA...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CCA 90 bp ATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGGGGCTCCAGGAGCTGTaGGCACACAGATCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: IAPNVQISRWAASWDSQRGLQEL*AHRSVP
Trigger: GGGAACGGATCTGTGTGCCCACAGCTCCTGGAGCCC...CCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGAAGGCATGGGATCACTaGGTGCTAGACGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: RKEVMFPIYNPFPSAGSQKAWDH*VLDGWV
Trigger: AACCCAGCCGTCTAGCACCCAGTGATCCCATGCCTT...CTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp AATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGAAGGCATGGGATCACTaGGTGCTAGACGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: NFPLGSILGFPKAWDHWVKAWDH*VLDGWV
Trigger: AACCCAGCCGTCTAGCACCCAGTGATCCCATGCCTT...CACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp GTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAGGATTCCCAAAGGCATaGGATCACTGGGTGCTAGAC +
Preference number: 4 (lower is better)
Translates to: VMFPIYNPFPSAGSQPRRGFPKA*DHWVLD
Trigger: GTCTAGCACCCAGTGATCCCATGCCTTTGGGAATCC...TCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGAGTACAAATTTCCCGTTaGGCAGCATCCTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: PVGQHPGIPKGMGSLGARVQISR*AASWDS
Trigger: GGAATCCCAGGATGCTGCCCAACGGGAAATTTGTAC...TCTAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGCAGAGGGGAGTGGGCTaGAACCAAATGGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: QISRWAASWDSQRHGITGQRGVG*NQMEPF
Trigger: AAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTG...CCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CAAAAAGACAGCCATGATGGGTCCGTCCTGATGACCCCAGCATCAGACGTGGAGACTTGCAGAGGGGAGTaGGCTGGAACCAAATGGAGC +
Preference number: 4 (lower is better)
Translates to: QKDSHDGSVLMTPASDVETCRGE*AGTKWS
Trigger: GCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGT...CTCCACGTCTGATGCTGGGGTCATCAGGACGGACCCATCATGGCTGTCTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp GGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCACTTGCAGAGGGGAGTaGGCTGGAACCAAATGGAGC +
Preference number: 4 (lower is better)
Translates to: GRKSCSPFTTRSLVREASTCRGE*AGTKWS
Trigger: GCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGT...GCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp AATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGACTTGCAGAGGGGAGTaGGCTGGAACCAAATGGAGC +
Preference number: 4 (lower is better)
Translates to: NFPLGSILGFPKAWDHWVTCRGE*AGTKWS
Trigger: GCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGT...CACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGACTTGCAGAGGGGAGTaGGCTGGAACCAAATGGAGC +
Preference number: 4 (lower is better)
Translates to: RKEVMFPIYNPFPSAGSQTCRGE*AGTKWS
Trigger: GCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGT...CTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGACCTAAGGGCAAACAGCTaGCAGGAAGGTGGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: PLGSILGFPKAWDHWVLDLRANS*QEGGVF
Trigger: AAAGACACCACCTTCCTGCCAGCTGTTTGCCCTTAG...GTCTAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp AGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCGATGGCTGGTCCCTGTaGTGTGGCATTGATAGCACC +
Preference number: 4 (lower is better)
Translates to: RCSRTPEGSHVPHLQPVPDGWSL*CGIDST
Trigger: GGTGCTATCAATGCCACATCACAGGGACCAGCCATC...GGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp CAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGGCAAAAAGACAGCCATaGTGGGTCCGTCCTGATGAC +
Preference number: 4 (lower is better)
Translates to: QISRWAASWDSQRHGITGAKRQP*WVRPDD
Trigger: GTCATCAGGACGGACCCATCATGGCTGTCTTTTTGC...CCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR TCA 90 bp ATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGACTGCGGTCCTTAGCTaGGGTGCTCAAGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: IAPNVQISRWAASWDSQRTAVLS*GAQGLR
Trigger: CCGGAGTCCTTGAGCACCTCAGCTAAGGACCGCAGT...CCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp TGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACCTGGAGAGTATGCTCTaGGGGAAGCTGCGGCACTTG +
Preference number: 4 (lower is better)
Translates to: CTNFPLGSILGFPKAWDHLESML*GKLRHL
Trigger: CAAGTGCCGCAGCTTCCCTCAGAGCATACTCTCCAG...GTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp GTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTCATTCTGGGCTGGAATaGCGTAGTCGGCGACATCCC +
Preference number: 4 (lower is better)
Translates to: VQISRWAASWDSQRHGITHSGLE*RSRRHP
Trigger: GGGATGTCGCCGACTACGTCATTCCAGCCCAGAATG...AGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345901.7
ENST00000551178.5
ENST00000552050.5
CDS-3UTR GCA 90 bp AAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGTGATGACAGCACTCTaGAGGGAGGTGTCGACGTCT +
Preference number: 4 (lower is better)
Translates to: KFPVGQHPGIPKGMGSLGVMTAL*REVSTS
Trigger: AGACGTCGACACCTCCCTGCAGAGTGCTGTCATCAC...ACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR GCA 90 bp AGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCGTGATGACAGCACTCTaGAGGGAGGTGTCGACGTCT +
Preference number: 4 (lower is better)
Translates to: RCSRTPEGSHVPHLQPVPVMTAL*REVSTS
Trigger: AGACGTCGACACCTCCCTGCAGAGTGCTGTCATCAC...GGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp CCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGACATCCCAGATCCGCTaGCCAAGATCCGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: PNVQISRWAASWDSQRHGTSQIR*PRSEVL
Trigger: CAACACCTCGGATCTTGGGCAGCGGATCTGGGATGT...CCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR GCA 90 bp GTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTTCAGCACAGACGTTCTaGCGCTGGTTGGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: VQISRWAASWDSQRHGITSAQTF*RWLGVT
Trigger: TGTGACCCCCAACCAGCGGCAGAACGTCTGTGCTGA...AGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225328.10
ENST00000547178.5
CDS-3UTR GCA 90 bp GTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGCAAAGATCTCACAGGTaGCCCTGGCCAAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VGWNQMEPFSGHAQCYSQQRSHR*PWPSSL
Trigger: GAGAGAACTTGGCCAGGGGCACCTGTGAGATCTTTG...CTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp ATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAAAGCAAAGATCTCACAGGTaGCCCTGGCCAAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: MFPIYNPFPSAGSQPRRKQRSHR*PWPSSL
Trigger: GAGAGAACTTGGCCAGGGGCACCTGTGAGATCTTTG...CTTTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTGAACTCCACCCCGGCTaGGTCTCGGTAATATCTGGC +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVELHPG*VSVISG
Trigger: GCCAGATATTACCGAGACGCAGCCGGGGTGGAGTTC...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR GCA 90 bp TGGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTAAGGCTTTCATCAGGGTaGGGAACTCCACCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: WQEGGVFRRESTWIHWRVRLSSG*GTPPRL
Trigger: CAGCCGGGGTGGAGTTCCGCACCCTGATGAAAGCCT...TACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp CCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGACAGAAGAAAGCACCCTTaGCGTTCACCATCACGTCAA +
Preference number: 4 (lower is better)
Translates to: PLGSILGFPKAWDHWVLDRRKHP*RSPSRQ
Trigger: TTGACGTGATGGTGAACGGCAAGGGTGCTTTCTTCT...GTCTAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR GCA 90 bp GCTGGTCCCTGTGATGTGGCATTGATAGCACCCAATGTACAAATTTCCCGTTGGTCCCCTTCTGACTGCTaGTTCCACGCTTCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: AGPCDVALIAPNVQISRWSPSDC*FHASPR
Trigger: CCGAGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGA...CCAACGGGAAATTTGTACATTGGGTGCTATCAATGCCACATCACAGGGACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR GCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCTCCCCTTCTGACTGCTaGTTCCACGCTTCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSSPSDC*FHASPR
Trigger: CCGAGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGA...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR GCA 90 bp TGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACCGTTCCCCTTCTGACTaGTGCTTCCACGCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: CTNFPLGSILGFPKAWDHRSPSD*CFHASP
Trigger: AGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGAACG...GTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR GCA 90 bp AAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTATCCACTGGAGAGTATaGTCTGAGGGAAGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: KFPVGQHPGIPKGMGSLGIHWRV*SEGSCG
Trigger: GCCGCAGCTTCCCTCAGAGCATACTCTCCAGTGGAT...ACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp TTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGTCCCAGAAAGCGTCTaGCATCTCCCCCACTTTAAT +
Preference number: 4 (lower is better)
Translates to: FPLGSILGFPKAWDHWVLVPESV*HLPHFN
Trigger: ATTAAAGTGGGGGAGATGGCAGACGCTTTCTGGGAC...TAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp AATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGACGCGCCATCAGGAATaGCTTCATTCTGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: NFPLGSILGFPKAWDHWVTRHQE*LHSGLE
Trigger: TTCCAGCCCAGAATGAAGGCATTCCTGATGGCGCGT...CACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345901.7
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTGTTCTCTCCCTGGGCTaGAATGACGTAGTCGGCGAC +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVVLSLG*NDVVGD
Trigger: GTCGCCGACTACGTCATTCCAGCCCAGGGAGAGAAC...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTCGTTCTGCCGCTGGTTaGGGGTCACAATCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVRSAAG*GSQSGW
Trigger: CCAACCTGATTGTGACCCCCAACCAGCGGCAGAACG...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CCA 90 bp GCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATCAGACGTTCTGCCGCTaGTTGGGGGTCACAATCAGG +
Preference number: 4 (lower is better)
Translates to: APNVQISRWAASWDSQRHQTFCR*LGVTIR
Trigger: CCTGATTGTGACCCCCAACCAGCGGCAGAACGTCTG...ATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225328.10
ENST00000547178.5
CDS-3UTR CCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTCAGACGTTCTGCCGCTaGTTGGGGGTCACAATCAGG +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVQTFCR*LGVTIR
Trigger: CCTGATTGTGACCCCCAACCAGCGGCAGAACGTCTG...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CCA 90 bp TGGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTAGGCAGTCGCTGTCCTTaGAGCACGCGCCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: WQEGGVFRRESTWIHWRVGSRCP*STRHQE
Trigger: TTCCTGATGGCGCGTGCTCCAAGGACAGCGACTGCC...TACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp GGCATTGATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCGGCAGTCGCTGTCCTTaGAGCACGCGCCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: GIDSTQCTNFPLGSILGFGSRCP*STRHQE
Trigger: TTCCTGATGGCGCGTGCTCCAAGGACAGCGACTGCC...GAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTATCAATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGGCAGTCGCTGTCCTTaGAGCACGCGCCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSGSRCP*STRHQE
Trigger: TTCCTGATGGCGCGTGCTCCAAGGACAGCGACTGCC...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTTCTCACAGGTGCCCCTaGCCAAGTTCTCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVSHRCP*PSSLSA
Trigger: TGCGGAGAGAGAACTTGGCCAGGGGCACCTGTGAGA...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CCA 90 bp AAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTAGCCCAGTCGGAAGATaGGGCAGTAGTGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: KFPVGQHPGIPKGMGSLGSPVGR*GSSGSW
Trigger: CCAAGAACCACTACTGCCCCATCTTCCGACTGGGCT...ACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp GGCATTGATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCTCCAGGGCTATATCCTaGAAGTCGCTCCCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GIDSTQCTNFPLGSILGFSRAIS*KSLPAQ
Trigger: CTGGGCCGGGAGCGACTTCCAGGATATAGCCCTGGA...GAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTATCAATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCTCCAGGGCTATATCCTaGAAGTCGCTCCCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSSRAIS*KSLPAQ
Trigger: CTGGGCCGGGAGCGACTTCCAGGATATAGCCCTGGA...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CCA 90 bp CCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGACGCTTCGCCTCGGGTaGCTCCTGCAGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PNKSVREYISWAGPRKRLTLRLG*LLQLLL
Trigger: CAGCAGGAGCTGCAGGAGCCACCCGAGGCGAAGCGT...CAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp AAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTAAGGCATGGGATCACTaGGTGCTAGACGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: KFPVGQHPGIPKGMGSLGKAWDH*VLDGWV
Trigger: AACCCAGCCGTCTAGCACCCAGTGATCCCATGCCTT...ACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp ATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAAAGGGATTCCCAAAGGCATaGGATCACTGGGTGCTAGAC +
Preference number: 4 (lower is better)
Translates to: MFPIYNPFPSAGSQPRRKGFPKA*DHWVLD
Trigger: GTCTAGCACCCAGTGATCCCATGCCTTTGGGAATCC...CTTTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp AGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATGGATTCCCAAAGGCATaGGATCACTGGGTGCTAGAC +
Preference number: 4 (lower is better)
Translates to: RGVGWNQMEPFSGHAQCYGFPKA*DHWVLD
Trigger: GTCTAGCACCCAGTGATCCCATGCCTTTGGGAATCC...ATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp AGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCAACTGACGGCAGGGGGTaGGGCAAAAAGACAGCCATG +
Preference number: 4 (lower is better)
Translates to: STQCTNFPLGSILGFPKATDGRG*GKKTAM
Trigger: CATGGCTGTCTTTTTGCCCCACCCCCTGCCGTCAGT...TGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp GTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTACTGACGGCAGGGGGTaGGGCAAAAAGACAGCCATG +
Preference number: 4 (lower is better)
Translates to: VQISRWAASWDSQRHGITTDGRG*GKKTAM
Trigger: CATGGCTGTCTTTTTGCCCCACCCCCTGCCGTCAGT...AGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp TTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAACTAAGGGCAAACAGCTaGCAGGAAGGTGGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: LQRGVGWNQMEPFSGHAQLRANS*QEGGVF
Trigger: AAAGACACCACCTTCCTGCCAGCTGTTTGCCCTTAG...TTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp ATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCAGATCCGTTCCCCTTCTaGCTGCTGCTTCCACGCTTC +
Preference number: 4 (lower is better)
Translates to: MYKFPVGQHPGIPKGMGSDPFPF*LLLPRF
Trigger: GAAGCGTGGAAGCAGCAGTCAGAAGGGGAACGGATC...TGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR TCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGATCCGTTCCCCTTCTaGCTGCTGCTTCCACGCTTC +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSDPFPF*LLLPRF
Trigger: GAAGCGTGGAAGCAGCAGTCAGAAGGGGAACGGATC...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR TCA 90 bp GTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGTCACTTTGCTCTGTaGTGGCTGGTCCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: VQISRWAASWDSQRHGITGHFAL*WLVPVM
Trigger: CATCACAGGGACCAGCCATCACAGAGCAAAGTGACC...AGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR TCA 90 bp CACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGTCACTTTGCTCTGTaGTGGCTGGTCCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: HPMYKFPVGQHPGIPKGMGHFAL*WLVPVM
Trigger: CATCACAGGGACCAGCCATCACAGAGCAAAGTGACC...CATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR TCA 90 bp ACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGCAAAAAGACAGCCATaGTGGGTCCGTCCTGATGAC +
Preference number: 4 (lower is better)
Translates to: TNFPLGSILGFPKAWDHWAKRQP*WVRPDD
Trigger: GTCATCAGGACGGACCCATCATGGCTGTCTTTTTGC...CCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR TCA 90 bp AGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCGCAAAAAGACAGCCATaGTGGGTCCGTCCTGATGAC +
Preference number: 4 (lower is better)
Translates to: RCSRTPEGSHVPHLQPVPAKRQP*WVRPDD
Trigger: GTCATCAGGACGGACCCATCATGGCTGTCTTTTTGC...GGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp ATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACATTCTGGGCTGGAATaGCGTAGTCGGCGACATCCC +
Preference number: 4 (lower is better)
Translates to: MYKFPVGQHPGIPKGMGSHSGLE*RSRRHP
Trigger: GGGATGTCGCCGACTACGTCATTCCAGCCCAGAATG...TGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345901.7
ENST00000551178.5
ENST00000552050.5
CDS-3UTR TCA 90 bp GTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAGGAAAGATCTGTCCTTaGCGTCCATCACATTGTTGG +
Preference number: 4 (lower is better)
Translates to: VMFPIYNPFPSAGSQPRRGKICP*RPSHCW
Trigger: CCAACAATGTGATGGACGTCAAGGACAGATCTTTCC...TCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547178.5
ENST00000551178.5
CDS-3UTR TCA 90 bp ATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCACAGCTCCCACTGCTaGCTGAAACCCAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: IAPNVQISRWAASWDSQRHSSHC*LKPSPA
Trigger: TGCAGGACTGGGTTTCAGTCAGCAGTGGGAGCTGTG...CCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552050.5
CDS-3UTR GCA 90 bp GGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTGAGGTAACATCCCAGATCCGCTaGCCAAGATCCGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GTKWSPFPDTHNAIPSEVTSQIR*PRSEVL
Trigger: CAACACCTCGGATCTTGGGCAGCGGATCTGGGATGT...TACCTCACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp GGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTATTCAGCACAGACGTTCTaGCGCTGGTTGGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: GRKVVSLGERVLGSTGEYSAQTF*RWLGVT
Trigger: TGTGACCCCCAACCAGCGGCAGAACGTCTGTGCTGA...ATACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225328.10
ENST00000547178.5
CDS-3UTR GCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCTCAGCACAGACGTTCTaGCGCTGGTTGGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSSAQTF*RWLGVT
Trigger: TGTGACCCCCAACCAGCGGCAGAACGTCTGTGCTGA...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR GCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCCGTTCCCCTTCTGACTaGTGCTTCCACGCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSRSPSD*CFHASP
Trigger: AGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGAACG...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR GCA 90 bp CAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCGTTCCCCTTCTGACTaGTGCTTCCACGCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: QCTNFPLGSILGFPKAWDRSPSD*CFHASP
Trigger: AGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGAACG...ATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR GCA 90 bp AGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCAACGTGGAGGTCACTTTaGTCTGTGATGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: STQCTNFPLGSILGFPKATWRSL*SVMAGP
Trigger: GGGACCAGCCATCACAGAGCAAAGTGACCTCCACGT...TGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR GCA 90 bp CAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGCGGAAGCTGCGGCACTTaGAGAGGGGAGTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QIRVSENTYLGQVPESVCGSCGT*RGEWAG
Trigger: TCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCTTCC...GCAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp ATGGCTGGTCCCTGTGATGTGGCATTGATAGCACCCAATGTACAAATTTCCCGTTGCTCTGAGGGAAGCTaGGGCACTTGCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: MAGPCDVALIAPNVQISRCSEGS*GTCRGE
Trigger: CTCCCCTCTGCAAGTGCCGCAGCTTCCCTCAGAGCA...ACGGGAAATTTGTACATTGGGTGCTATCAATGCCACATCACAGGGACCAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp TGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACATCCACTGGAGAGTATaGTCTGAGGGAAGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: CTNFPLGSILGFPKAWDHIHWRV*SEGSCG
Trigger: GCCGCAGCTTCCCTCAGAGCATACTCTCCAGTGGAT...GTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp CTGGGTTTAGGACAGGGCCTGAACGTAAGCAGAGGCAATTCACGTGCTCCTGTGGTCCCAGAAAGCGTCTaGCATCTCCCCCACTTTAAT +
Preference number: 4 (lower is better)
Translates to: LGLGQGLNVSRGNSRAPVVPESV*HLPHFN
Trigger: ATTAAAGTGGGGGAGATGGCAGACGCTTTCTGGGAC...CACAGGAGCACGTGAATTGCCTCTGCTTACGTTCAGGCCCTGTCCTAAACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552456.1
CDS-3UTR CCA 90 bp TGGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTACAGACGTTCTGCCGCTaGTTGGGGGTCACAATCAGG +
Preference number: 4 (lower is better)
Translates to: WQEGGVFRRESTWIHWRVQTFCR*LGVTIR
Trigger: CCTGATTGTGACCCCCAACCAGCGGCAGAACGTCTG...TACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225328.10
ENST00000547178.5
CDS-3UTR CCA 90 bp CTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGATTCTTGGGGCCAAAGTaGCATGATTTCAGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: LRHLQRGVGWNQMEPFSGFLGPK*HDFRKD
Trigger: ATCTTTCCTGAAATCATGCCACTTTGGCCCCAAGAA...TCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp GCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACATTCTTGGGGCCAAAGTaGCATGATTTCAGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: AALAEGSGLEPNGALFRTFLGPK*HDFRKD
Trigger: ATCTTTCCTGAAATCATGCCACTTTGGCCCCAAGAA...TGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp CACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGAGCCCAGTCGGAAGATaGGGCAGTAGTGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: HPMYKFPVGQHPGIPKGMSPVGR*GSSGSW
Trigger: CCAAGAACCACTACTGCCCCATCTTCCGACTGGGCT...CATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp ATGGCTGGTCCCTGTGATGTGGCATTGATAGCACCCAATGTACAAATTTCCCGTATTCACGTGCTCCTGTaGGGCTCCAGGAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: MAGPCDVALIAPNVQISRIHVLL*GSRSCG
Trigger: CCCACAGCTCCTGGAGCCCCACAGGAGCACGTGAAT...ACGGGAAATTTGTACATTGGGTGCTATCAATGCCACATCACAGGGACCAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp AAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGGATTCCCAAAGGCATaGGATCACTGGGTGCTAGAC +
Preference number: 4 (lower is better)
Translates to: KFPVGQHPGIPKGMGSLGGFPKA*DHWVLD
Trigger: GTCTAGCACCCAGTGATCCCATGCCTTTGGGAATCC...ACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGGTACAAATTTCCCGTTaGGCAGCATCCTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: RKEVMFPIYNPFPSAGSQVQISR*AASWDS
Trigger: GGAATCCCAGGATGCTGCCCAACGGGAAATTTGTAC...CTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp TGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACCCCCAGCATCAGACGTaGAGGTCACTTTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: CTNFPLGSILGFPKAWDHPQHQT*RSLCSV
Trigger: CACAGAGCAAAGTGACCTCCACGTCTGATGCTGGGG...GTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp GCTGGTCCCTGTGATGTGGCATTGATAGCACCCAATGTACAAATTTCCCGTTGGACTGACGGCAGGGGGTaGGGCAAAAAGACAGCCATG +
Preference number: 4 (lower is better)
Translates to: AGPCDVALIAPNVQISRWTDGRG*GKKTAM
Trigger: CATGGCTGTCTTTTTGCCCCACCCCCTGCCGTCAGT...CCAACGGGAAATTTGTACATTGGGTGCTATCAATGCCACATCACAGGGACCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp TTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAAAGGAGAGAGAGTACTTaGATCCACTGGAGAGTATGC +
Preference number: 4 (lower is better)
Translates to: LQRGVGWNQMEPFSGHAQRREST*IHWRVC
Trigger: GCATACTCTCCAGTGGATCCAAGTACTCTCTCTCCT...TTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp TTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAAGGAGAGAGAGTACTTaGATCCACTGGAGAGTATGC +
Preference number: 4 (lower is better)
Translates to: FPLGSILGFPKAWDHWVLRREST*IHWRVC
Trigger: GCATACTCTCCAGTGGATCCAAGTACTCTCTCTCCT...TAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp GTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGCTAAGGGCAAACAGCTaGCAGGAAGGTGGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: VGWNQMEPFSGHAQCYSQLRANS*QEGGVF
Trigger: AAAGACACCACCTTCCTGCCAGCTGTTTGCCCTTAG...CTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAAAGGAAGAACTAAGGGCAAACAGCTaGCAGGAAGGTGGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: PIYNPFPSAGSQPRRKEELRANS*QEGGVF
Trigger: AAAGACACCACCTTCCTGCCAGCTGTTTGCCCTTAG...TTCTTCCTTTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp AGCTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGTTTAATTCTGTGTACTaGCCTAAGGGCAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: SCGTCRGEWAGTKWSPFPFNSVY*PKGKQL
Trigger: CAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAA...CGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp AGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCAGCCTTCATTCTGGGCTaGAATGACGTAGTCGGCGAC +
Preference number: 4 (lower is better)
Translates to: STQCTNFPLGSILGFPKAAFILG*NDVVGD
Trigger: GTCGCCGACTACGTCATTCCAGCCCAGAATGAAGGC...TGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345901.7
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTGCCCATGGCCAGTCATaGAAATGGATCTGGGACCCA +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVAHGQS*KWIWDP
Trigger: TGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR TCA 90 bp TTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTATCTTGTTCTTGGCGATaGCATACTTCTCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: FPLGSILGFPKAWDHWVLSCSWR*HTSRSC
Trigger: ACAAGACCGAGAAGTATGTCATCGCCAAGAACAAGA...TAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR TCA 90 bp TTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGGAGGAGACAGACTTTaGAAGTTTATTGTCCAGACG +
Preference number: 4 (lower is better)
Translates to: FPLGSILGFPKAWDHWVLGGDRL*KFIVQT
Trigger: CGTCTGGACAATAAACTTTCAAAGTCTGTCTCCTCC...TAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR TCA 90 bp ATGGCTGGTCCCTGTGATGTGGCATTGATAGCACCCAATGTACAAATTTCCCGTGATCCGTTCCCCTTCTaGCTGCTGCTTCCACGCTTC +
Preference number: 4 (lower is better)
Translates to: MAGPCDVALIAPNVQISRDPFPF*LLLPRF
Trigger: GAAGCGTGGAAGCAGCAGTCAGAAGGGGAACGGATC...ACGGGAAATTTGTACATTGGGTGCTATCAATGCCACATCACAGGGACCAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR TCA 90 bp ATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCAGGTCACTTTGCTCTGTaGTGGCTGGTCCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: MYKFPVGQHPGIPKGMGSGHFAL*WLVPVM
Trigger: CATCACAGGGACCAGCCATCACAGAGCAAAGTGACC...TGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR TCA 90 bp GGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTATGGTCACTTTGCTCTGTaGTGGCTGGTCCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: GRKVVSLGERVLGSTGEYGHFAL*WLVPVM
Trigger: CATCACAGGGACCAGCCATCACAGAGCAAAGTGACC...ATACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp CAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGCGGAGAAAGGAAGAACTaGCGGCAGGGGGTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: QIRVSENTYLGQVPESVCGERKN*RQGVGQ
Trigger: TTGCCCCACCCCCTGCCGTCAGTTCTTCCTTTCTCC...GCAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp GGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTATGTGATGACAGCACTCTaGAGGGAGGTGTCGACGTCT +
Preference number: 4 (lower is better)
Translates to: GRKVVSLGERVLGSTGEYVMTAL*REVSTS
Trigger: AGACGTCGACACCTCCCTGCAGAGTGCTGTCATCAC...ATACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTGATGACAGCACTCTaGAGGGAGGTGTCGACGTCT +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSVMTAL*REVSTS
Trigger: AGACGTCGACACCTCCCTGCAGAGTGCTGTCATCAC...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR GCA 90 bp GGCATTGATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCACATCCCAGATCCGCTaGCCAAGATCCGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GIDSTQCTNFPLGSILGFTSQIR*PRSEVL
Trigger: CAACACCTCGGATCTTGGGCAGCGGATCTGGGATGT...GAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTATCAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR GCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCACATCCCAGATCCGCTaGCCAAGATCCGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSTSQIR*PRSEVL
Trigger: CAACACCTCGGATCTTGGGCAGCGGATCTGGGATGT...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR GCA 90 bp CCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGACGCGCCATCAGGAATaGCTTCATTCTCAGCACAGA +
Preference number: 4 (lower is better)
Translates to: PNVQISRWAASWDSQRHGTRHQE*LHSQHR
Trigger: TCTGTGCTGAGAATGAAGGCATTCCTGATGGCGCGT...CCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225328.10
ENST00000547178.5
CDS-3UTR GCA 90 bp CACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGCAAAGATCTCACAGGTaGCCCTGGCCAAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: HPMYKFPVGQHPGIPKGMQRSHR*PWPSSL
Trigger: GAGAGAACTTGGCCAGGGGCACCTGTGAGATCTTTG...CATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR GCA 90 bp GGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCAGAAGAAAGCACCCTTaGCGTTCACCATCACGTCAA +
Preference number: 4 (lower is better)
Translates to: GRKSCSPFTTRSLVREASRRKHP*RSPSRQ
Trigger: TTGACGTGATGGTGAACGGCAAGGGTGCTTTCTTCT...GCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp CAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGAGAAGAAAGCACCCTTaGCGTTCACCATCACGTCAA +
Preference number: 4 (lower is better)
Translates to: QISRWAASWDSQRHGITGRRKHP*RSPSRQ
Trigger: TTGACGTGATGGTGAACGGCAAGGGTGCTTTCTTCT...CCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR GCA 90 bp GGCATTGATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCACGTGGAGGTCACTTTaGTCTGTGATGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GIDSTQCTNFPLGSILGFTWRSL*SVMAGP
Trigger: GGGACCAGCCATCACAGAGCAAAGTGACCTCCACGT...GAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTATCAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR GCA 90 bp CAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGCTGCTCTGAGGGAAGCTaGGGCACTTGCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: QIRVSENTYLGQVPESVCCSEGS*GTCRGE
Trigger: CTCCCCTCTGCAAGTGCCGCAGCTTCCCTCAGAGCA...GCAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp AGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCGTCCCAGAAAGCGTCTaGCATCTCCCCCACTTTAAT +
Preference number: 4 (lower is better)
Translates to: RCSRTPEGSHVPHLQPVPVPESV*HLPHFN
Trigger: ATTAAAGTGGGGGAGATGGCAGACGCTTTCTGGGAC...GGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp AGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCAACTGAAACCCAGTCCTaGAAGCAGCAGAGGCGACAA +
Preference number: 4 (lower is better)
Translates to: STQCTNFPLGSILGFPKATETQS*KQQRRQ
Trigger: TTGTCGCCTCTGCTGCTTGCAGGACTGGGTTTCAGT...TGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552050.5
CDS-3UTR CCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCAGCCCAGTCGGAAGATaGGGCAGTAGTGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSSPVGR*GSSGSW
Trigger: CCAAGAACCACTACTGCCCCATCTTCCGACTGGGCT...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CCA 90 bp CAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGCTCGTCCTCGGCCTCCTaGGAACTGTCTTCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: QIRVSENTYLGQVPESVCSSSAS*ELSSRP
Trigger: GGGCCTAGAAGACAGTTCCCAGGAGGCCGAGGACGA...GCAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGATTCACGTGCTCCTGTaGGGCTCCAGGAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PNKSVREYISWAGPRKRLIHVLL*GSRSCG
Trigger: CCCACAGCTCCTGGAGCCCCACAGGAGCACGTGAAT...CAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATAAGGCATGGGATCACTaGGTGCTAGACGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: QCTNFPLGSILGFPKAWDKAWDH*VLDGWV
Trigger: AACCCAGCCGTCTAGCACCCAGTGATCCCATGCCTT...ATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGGTACAAATTTCCCGTTaGGCAGCATCCTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: PNVQISRWAASWDSQRHGVQISR*AASWDS
Trigger: GGAATCCCAGGATGCTGCCCAACGGGAAATTTGTAC...CCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp GAGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCGTACAAATTTCCCGTTaGGCAGCATCCTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: EVLKDSGRKSCSPFTTRSVQISR*AASWDS
Trigger: GGAATCCCAGGATGCTGCCCAACGGGAAATTTGTAC...GGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp GGCATTGATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCCCAGCATCAGACGTaGAGGTCACTTTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: GIDSTQCTNFPLGSILGFPQHQT*RSLCSV
Trigger: CACAGAGCAAAGTGACCTCCACGTCTGATGCTGGGG...GAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTATCAATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp GCTGGTCCCTGTGATGTGGCATTGATAGCACCCAATGTACAAATTTCCCGTTGGCCCCAGCATCAGACGTaGAGGTCACTTTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: AGPCDVALIAPNVQISRWPQHQT*RSLCSV
Trigger: CACAGAGCAAAGTGACCTCCACGTCTGATGCTGGGG...CCAACGGGAAATTTGTACATTGGGTGCTATCAATGCCACATCACAGGGACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CCA 90 bp ATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGTGGGCTGGAACCAAATaGAGCCCTTTTCCGGACACG +
Preference number: 4 (lower is better)
Translates to: IAPNVQISRWAASWDSQRWAGTK*SPFPDT
Trigger: CGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCA...CCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp GGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTATCAGAGGGGAGTGGGCTaGAACCAAATGGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: GRKVVSLGERVLGSTGEYQRGVG*NQMEPF
Trigger: AAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTG...ATACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp TCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAAAGTACTTGGATCCACTaGAGAGTATGCTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SCSPFTTRSLVREASHGESTWIH*RVCSEG
Trigger: TCCCTCAGAGCATACTCTCCAGTGGATCCAAGTACT...TTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp AGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATAGGAGAGAGAGTACTTaGATCCACTGGAGAGTATGC +
Preference number: 4 (lower is better)
Translates to: RGVGWNQMEPFSGHAQCYRREST*IHWRVC
Trigger: GCATACTCTCCAGTGGATCCAAGTACTCTCTCTCCT...ATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGGCCAGTCATGGAAATaGATCTGGGACCCAGACCTG +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSGQSWK*IWDPDL
Trigger: CAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCC...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR TCA 90 bp CAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGCGATCCGTTCCCCTTCTaGCTGCTGCTTCCACGCTTC +
Preference number: 4 (lower is better)
Translates to: QIRVSENTYLGQVPESVCDPFPF*LLLPRF
Trigger: GAAGCGTGGAAGCAGCAGTCAGAAGGGGAACGGATC...GCAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp ATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGGCAAAAAGACAGCCATaGTGGGTCCGTCCTGATGAC +
Preference number: 4 (lower is better)
Translates to: IAPNVQISRWAASWDSQRAKRQP*WVRPDD
Trigger: GTCATCAGGACGGACCCATCATGGCTGTCTTTTTGC...CCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR GCA 90 bp GGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTATCAAAGATCTCACAGGTaGCCCTGGCCAAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GRKVVSLGERVLGSTGEYQRSHR*PWPSSL
Trigger: GAGAGAACTTGGCCAGGGGCACCTGTGAGATCTTTG...ATACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCCAAAGATCTCACAGGTaGCCCTGGCCAAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSQRSHR*PWPSSL
Trigger: GAGAGAACTTGGCCAGGGGCACCTGTGAGATCTTTG...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR GCA 90 bp CCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGCGTTCCCCTTCTGACTaGTGCTTCCACGCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: PNKSVREYISWAGPRKRLRSPSD*CFHASP
Trigger: AGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGAACG...CAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR GCA 90 bp ATGGCTGGTCCCTGTGATGTGGCATTGATAGCACCCAATGTACAAATTTCCCGTACGTGGAGGTCACTTTaGTCTGTGATGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: MAGPCDVALIAPNVQISRTWRSL*SVMAGP
Trigger: GGGACCAGCCATCACAGAGCAAAGTGACCTCCACGT...ACGGGAAATTTGTACATTGGGTGCTATCAATGCCACATCACAGGGACCAGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR GCA 90 bp ATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGACGCGCCATCAGGAATaGCTTCATTCTGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: IAPNVQISRWAASWDSQRTRHQE*LHSGLE
Trigger: TTCCAGCCCAGAATGAAGGCATTCCTGATGGCGCGT...CCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345901.7
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp CCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGAGTACTTGGATCCACTaGAGAGTATGCTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PNVQISRWAASWDSQRHGSTWIH*RVCSEG
Trigger: TCCCTCAGAGCATACTCTCCAGTGGATCCAAGTACT...CCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CAAAAAGACAGCCATGATGGGTCCGTCCTGATGACCCCAGCATCAGACGTGGAGAGAGAATACATATCTTaGGCAGGTCCCAGAAAGCGT +
Preference number: 4 (lower is better)
Translates to: QKDSHDGSVLMTPASDVEREYIS*AGPRKR
Trigger: ACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCT...CTCCACGTCTGATGCTGGGGTCATCAGGACGGACCCATCATGGCTGTCTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp AGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTGCTTTTGGAGAAGTTaGATTTGGGGAAACGGATGT +
Preference number: 4 (lower is better)
Translates to: RGVGWNQMEPFSGHAQCYCFWRS*IWGNGC
Trigger: ACATCCGTTTCCCCAAATTCAACTTCTCCAAAAGCA...ATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225328.10
ENST00000345901.7
CDS-3UTR TCA 90 bp CAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTTTTGGAGAAGTTaGATTTGGGGAAACGGATGT +
Preference number: 4 (lower is better)
Translates to: QISRWAASWDSQRHGITGCFWRS*IWGNGC
Trigger: ACATCCGTTTCCCCAAATTCAACTTCTCCAAAAGCA...CCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000552050.5
CDS-3UTR TCA 90 bp CCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGGGAAAGATCTGTCCTTaGCGTCCATCACATTGCTTT +
Preference number: 4 (lower is better)
Translates to: PNVQISRWAASWDSQRHGGKICP*RPSHCF
Trigger: AAAGCAATGTGATGGACGTCAAGGACAGATCTTTCC...CCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000552050.5
CDS-3UTR TCA 90 bp AAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGGAAAGATCTGTCCTTaGCGTCCATCACATTGCTTT +
Preference number: 4 (lower is better)
Translates to: KFPVGQHPGIPKGMGSLGGKICP*RPSHCF
Trigger: AAAGCAATGTGATGGACGTCAAGGACAGATCTTTCC...ACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000552050.5
CDS-3UTR TCA 90 bp TGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTGGAGGAGACAGACTTTaGAAGTTTATTGTCCAGACG +
Preference number: 4 (lower is better)
Translates to: WAGTKWSPFPDTHNAIPSGGDRL*KFIVQT
Trigger: CGTCTGGACAATAAACTTTCAAAGTCTGTCTCCTCC...ACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR TCA 90 bp CAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGCGATGGCTGGTCCCTGTaGTGTGGCATTGATAGCACC +
Preference number: 4 (lower is better)
Translates to: QIRVSENTYLGQVPESVCDGWSL*CGIDST
Trigger: GGTGCTATCAATGCCACATCACAGGGACCAGCCATC...GCAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp AGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATCAATGCTATTCCCAGTaGGGTAATCTAGGAACTCTA +
Preference number: 4 (lower is better)
Translates to: RGVGWNQMEPFSGHAQCYQCYSQ*GNLGTL
Trigger: TAGAGTTCCTAGATTACCTCACTGGGAATAGCATTG...ATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp AGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATCATTGTTGGAGAAGTTaGATTTGGGGAAACGGATGT +
Preference number: 4 (lower is better)
Translates to: RGVGWNQMEPFSGHAQCYHCWRS*IWGNGC
Trigger: ACATCCGTTTCCCCAAATTCAACTTCTCCAACAATG...ATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547178.5
ENST00000551178.5
CDS-3UTR TCA 90 bp TGCCATCTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGAAAGATCTGTCCTTaGCGTCCATCACATTGTTGG +
Preference number: 4 (lower is better)
Translates to: CHLPHFNSVYWPKGKQLAGKICP*RPSHCW
Trigger: CCAACAATGTGATGGACGTCAAGGACAGATCTTTCC...TGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAGATGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp CCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGACATCCCAGATCCGCTaGCCAAGATCCGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: PNKSVREYISWAGPRKRLTSQIR*PRSEVL
Trigger: CAACACCTCGGATCTTGGGCAGCGGATCTGGGATGT...CAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp CAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGCACATCCCAGATCCGCTaGCCAAGATCCGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: QIRVSENTYLGQVPESVCTSQIR*PRSEVL
Trigger: CAACACCTCGGATCTTGGGCAGCGGATCTGGGATGT...GCAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCACGCGCCATCAGGAATaGCTTCATTCTCAGCACAGA +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSTRHQE*LHSQHR
Trigger: TCTGTGCTGAGAATGAAGGCATTCCTGATGGCGCGT...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR GCA 90 bp CACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGAGAAGAAAGCACCCTTaGCGTTCACCATCACGTCAA +
Preference number: 4 (lower is better)
Translates to: HPMYKFPVGQHPGIPKGMRRKHP*RSPSRQ
Trigger: TTGACGTGATGGTGAACGGCAAGGGTGCTTTCTTCT...CATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR GCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTAGAAGAAAGCACCCTTaGCGTTCACCATCACGTCAA +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVRRKHP*RSPSRQ
Trigger: TTGACGTGATGGTGAACGGCAAGGGTGCTTTCTTCT...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CCA 90 bp TGGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTAGTACAAATTTCCCGTTaGGCAGCATCCTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: WQEGGVFRRESTWIHWRVVQISR*AASWDS
Trigger: GGAATCCCAGGATGCTGCCCAACGGGAAATTTGTAC...TACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGCCAGAGGGGAGTGGGCTaGAACCAAATGGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: QIRVSENTYLGQVPESVCQRGVG*NQMEPF
Trigger: AAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTG...GCAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp GGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTGAGGTAAGTACTTGGATCCACTaGAGAGTATGCTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: GTKWSPFPDTHNAIPSEVSTWIH*RVCSEG
Trigger: TCCCTCAGAGCATACTCTCCAGTGGATCCAAGTACT...TACCTCACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp TGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACAGGAGAGAGAGTACTTaGATCCACTGGAGAGTATGC +
Preference number: 4 (lower is better)
Translates to: CTNFPLGSILGFPKAWDHRREST*IHWRVC
Trigger: GCATACTCTCCAGTGGATCCAAGTACTCTCTCTCCT...GTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp ATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAAAGTTTAATTCTGTGTACTaGCCTAAGGGCAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: MFPIYNPFPSAGSQPRRKFNSVY*PKGKQL
Trigger: CAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAA...CTTTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGAAGGAGAGAATACATATCTTaGGCAGGTCCCAGAAAGCGT +
Preference number: 4 (lower is better)
Translates to: LPHFNSVYWPKGKQLAGRREYIS*AGPRKR
Trigger: ACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCT...CCTTCCTGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGGCCTTCATTCTGGGCTaGAATGACGTAGTCGGCGAC +
Preference number: 4 (lower is better)
Translates to: PNKSVREYISWAGPRKRLAFILG*NDVVGD
Trigger: GTCGCCGACTACGTCATTCCAGCCCAGAATGAAGGC...CAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345901.7
ENST00000551178.5
CDS-3UTR CCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTAGAACCTCCTCTGAGTaGGAAGGAAAGGTTCATTCC +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVRTSSE*EGKVHS
Trigger: GGAATGAACCTTTCCTTCCCACTCAGAGGAGGTTCT...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
3UTR CAA 72 bp TGTGGCATTGATAGCACCCAATGTACAAATTTCCCGTaGGGCAGCATCCTGGGATTCCCAAAGGCATGGGAT +
Preference number: 4 (lower is better)
Translates to: CGIDSTQCTNFP*GSILGFPKAWD
Trigger: ATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTATCAATGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR TCA 90 bp CACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGTCTTGTTCTTGGCGATaGCATACTTCTCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: HPMYKFPVGQHPGIPKGMSCSWR*HTSRSC
Trigger: ACAAGACCGAGAAGTATGTCATCGCCAAGAACAAGA...CATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR TCA 90 bp TGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTTGCTTTTGGAGAAGTTaGATTTGGGGAAACGGATGT +
Preference number: 4 (lower is better)
Translates to: WAGTKWSPFPDTHNAIPSCFWRS*IWGNGC
Trigger: ACATCCGTTTCCCCAAATTCAACTTCTCCAAAAGCA...ACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225328.10
ENST00000345901.7
CDS-3UTR TCA 90 bp AGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCAGGAGGAGACAGACTTTaGAAGTTTATTGTCCAGACG +
Preference number: 4 (lower is better)
Translates to: STQCTNFPLGSILGFPKAGGDRL*KFIVQT
Trigger: CGTCTGGACAATAAACTTTCAAAGTCTGTCTCCTCC...TGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR TCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTGGAGGAGACAGACTTTaGAAGTTTATTGTCCAGACG +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVGGDRL*KFIVQT
Trigger: CGTCTGGACAATAAACTTTCAAAGTCTGTCTCCTCC...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR TCA 90 bp CAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGCGCAAAAAGACAGCCATaGTGGGTCCGTCCTGATGAC +
Preference number: 4 (lower is better)
Translates to: QIRVSENTYLGQVPESVCAKRQP*WVRPDD
Trigger: GTCATCAGGACGGACCCATCATGGCTGTCTTTTTGC...GCAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp AGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCCAATGCTATTCCCAGTaGGGTAATCTAGGAACTCTA +
Preference number: 4 (lower is better)
Translates to: RCSRTPEGSHVPHLQPVPQCYSQ*GNLGTL
Trigger: TAGAGTTCCTAGATTACCTCACTGGGAATAGCATTG...GGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp CTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGAAGGCATTGTTGGAGAAGTTaGATTTGGGGAAACGGATGT +
Preference number: 4 (lower is better)
Translates to: LPHFNSVYWPKGKQLAGRHCWRS*IWGNGC
Trigger: ACATCCGTTTCCCCAAATTCAACTTCTCCAACAATG...CCTTCCTGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547178.5
ENST00000551178.5
CDS-3UTR TCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGGAAAGATCTGTCCTTaGCGTCCATCACATTGTTGG +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSGKICP*RPSHCW
Trigger: CCAACAATGTGATGGACGTCAAGGACAGATCTTTCC...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR TCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTATCCAAGTCCCCTTTTaGCAGATCATAGATAGCCCA +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVIQVPF*QIIDSP
Trigger: TGGGCTATCTATGATCTGTCAAAAGGGGACTTGGAT...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR GCA 90 bp ATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGAGAAGAAAGCACCCTTaGCGTTCACCATCACGTCAA +
Preference number: 4 (lower is better)
Translates to: IAPNVQISRWAASWDSQRRRKHP*RSPSRQ
Trigger: TTGACGTGATGGTGAACGGCAAGGGTGCTTTCTTCT...CCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp TATGACCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCACTGACGGCAGGGGGTaGGGCAAAAAGACAGCCATG +
Preference number: 4 (lower is better)
Translates to: YDQIRVSENTYLGQVPESTDGRG*GKKTAM
Trigger: CATGGCTGTCTTTTTGCCCCACCCCCTGCCGTCAGT...GCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGGTCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATAGTACTTGGATCCACTaGAGAGTATGCTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: QCTNFPLGSILGFPKAWDSTWIH*RVCSEG
Trigger: TCCCTCAGAGCATACTCTCCAGTGGATCCAAGTACT...ATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGAAGGTTTAATTCTGTGTACTaGCCTAAGGGCAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: LPHFNSVYWPKGKQLAGRFNSVY*PKGKQL
Trigger: CAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAA...CCTTCCTGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp AGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCAAGAGAATACATATCTTaGGCAGGTCCCAGAAAGCGT +
Preference number: 4 (lower is better)
Translates to: STQCTNFPLGSILGFPKAREYIS*AGPRKR
Trigger: ACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCT...TGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp TGGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTATCTTGTTCTTGGCGATaGCATACTTCTCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: WQEGGVFRRESTWIHWRVSCSWR*HTSRSC
Trigger: ACAAGACCGAGAAGTATGTCATCGCCAAGAACAAGA...TACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR TCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCTCTTGTTCTTGGCGATaGCATACTTCTCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSSCSWR*HTSRSC
Trigger: ACAAGACCGAGAAGTATGTCATCGCCAAGAACAAGA...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR TCA 90 bp ATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGGGAAAGATCTGTCCTTaGCGTCCATCACATTGCTTT +
Preference number: 4 (lower is better)
Translates to: IAPNVQISRWAASWDSQRGKICP*RPSHCF
Trigger: AAAGCAATGTGATGGACGTCAAGGACAGATCTTTCC...CCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000552050.5
CDS-3UTR TCA 90 bp GGCATTGATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCGGAGGAGACAGACTTTaGAAGTTTATTGTCCAGACG +
Preference number: 4 (lower is better)
Translates to: GIDSTQCTNFPLGSILGFGGDRL*KFIVQT
Trigger: CGTCTGGACAATAAACTTTCAAAGTCTGTCTCCTCC...GAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTATCAATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR TCA 90 bp TGCCATCTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCACAATGCTATTCCCAGTaGGGTAATCTAGGAACTCTA +
Preference number: 4 (lower is better)
Translates to: CHLPHFNSVYWPKGKQLAQCYSQ*GNLGTL
Trigger: TAGAGTTCCTAGATTACCTCACTGGGAATAGCATTG...TGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAGATGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTCATTGTTGGAGAAGTTaGATTTGGGGAAACGGATGT +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVHCWRS*IWGNGC
Trigger: ACATCCGTTTCCCCAAATTCAACTTCTCCAACAATG...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR GCA 90 bp TATGACCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCACGTGGAGGTCACTTTaGTCTGTGATGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: YDQIRVSENTYLGQVPESTWRSL*SVMAGP
Trigger: GGGACCAGCCATCACAGAGCAAAGTGACCTCCACGT...GCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGGTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp TGCCATCTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCATTCTTGGGGCCAAAGTaGCATGATTTCAGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: CHLPHFNSVYWPKGKQLAFLGPK*HDFRKD
Trigger: ATCTTTCCTGAAATCATGCCACTTTGGCCCCAAGAA...TGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAGATGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTTTCTTGGGGCCAAAGTaGCATGATTTCAGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVFLGPK*HDFRKD
Trigger: ATCTTTCCTGAAATCATGCCACTTTGGCCCCAAGAA...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CCA 90 bp ATGGCTGGTCCCTGTGATGTGGCATTGATAGCACCCAATGTACAAATTTCCCGTAGGAGAGAGAGTACTTaGATCCACTGGAGAGTATGC +
Preference number: 4 (lower is better)
Translates to: MAGPCDVALIAPNVQISRRREST*IHWRVC
Trigger: GCATACTCTCCAGTGGATCCAAGTACTCTCTCTCCT...ACGGGAAATTTGTACATTGGGTGCTATCAATGCCACATCACAGGGACCAGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp CACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGTTTAATTCTGTGTACTaGCCTAAGGGCAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: HPMYKFPVGQHPGIPKGMFNSVY*PKGKQL
Trigger: CAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAA...CATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp TGGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTAAGAGAATACATATCTTaGGCAGGTCCCAGAAAGCGT +
Preference number: 4 (lower is better)
Translates to: WQEGGVFRRESTWIHWRVREYIS*AGPRKR
Trigger: ACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCT...TACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTATCATAGATAGCCCATaGCCAGTCATGGAAATGGAT +
Preference number: 4 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVIIDSP*PVMEMD
Trigger: ATCCATTTCCATGACTGGCCATGGGCTATCTATGAT...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR TCA 90 bp GGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTATCAATGCTATTCCCAGTaGGGTAATCTAGGAACTCTA +
Preference number: 4 (lower is better)
Translates to: GRKVVSLGERVLGSTGEYQCYSQ*GNLGTL
Trigger: TAGAGTTCCTAGATTACCTCACTGGGAATAGCATTG...ATACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR TCA 90 bp ATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACAATGCTATTCCCAGTaGGGTAATCTAGGAACTCTA +
Preference number: 4 (lower is better)
Translates to: MYKFPVGQHPGIPKGMGSQCYSQ*GNLGTL
Trigger: TAGAGTTCCTAGATTACCTCACTGGGAATAGCATTG...TGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp GGCATTGATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCTTCTTGGGGCCAAAGTaGCATGATTTCAGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: GIDSTQCTNFPLGSILGFFLGPK*HDFRKD
Trigger: ATCTTTCCTGAAATCATGCCACTTTGGCCCCAAGAA...GAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTATCAATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CCA 90 bp CCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGAGTACTTGGATCCACTaGAGAGTATGCTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PNKSVREYISWAGPRKRLSTWIH*RVCSEG
Trigger: TCCCTCAGAGCATACTCTCCAGTGGATCCAAGTACT...CAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp GCTGGTCCCTGTGATGTGGCATTGATAGCACCCAATGTACAAATTTCCCGTTGGTTTAATTCTGTGTACTaGCCTAAGGGCAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: AGPCDVALIAPNVQISRWFNSVY*PKGKQL
Trigger: CAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAA...CCAACGGGAAATTTGTACATTGGGTGCTATCAATGCCACATCACAGGGACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCTCATGGAAATGGATCTaGGACCCAGACCTGTTAAAT +
Preference number: 4 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSSWKWI*DPDLLN
Trigger: ATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGA...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR TCA 90 bp CCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGGGAGGAGACAGACTTTaGAAGTTTATTGTCCAGACG +
Preference number: 4 (lower is better)
Translates to: PNKSVREYISWAGPRKRLGGDRL*KFIVQT
Trigger: CGTCTGGACAATAAACTTTCAAAGTCTGTCTCCTCC...CAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR GCA 90 bp TATGACCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCCCAGAAAGCGTCTaGCATCTCCCCCACTTTAAT +
Preference number: 4 (lower is better)
Translates to: YDQIRVSENTYLGQVPESVPESV*HLPHFN
Trigger: ATTAAAGTGGGGGAGATGGCAGACGCTTTCTGGGAC...GCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGGTCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CCA 90 bp ATGGCTGGTCCCTGTGATGTGGCATTGATAGCACCCAATGTACAAATTTCCCGTTTCTTGGGGCCAAAGTaGCATGATTTCAGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: MAGPCDVALIAPNVQISRFLGPK*HDFRKD
Trigger: ATCTTTCCTGAAATCATGCCACTTTGGCCCCAAGAA...ACGGGAAATTTGTACATTGGGTGCTATCAATGCCACATCACAGGGACCAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR TCA 90 bp TATGACCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCTCTTGTTCTTGGCGATaGCATACTTCTCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: YDQIRVSENTYLGQVPESSCSWR*HTSRSC
Trigger: ACAAGACCGAGAAGTATGTCATCGCCAAGAACAAGA...GCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGGTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CCA 90 bp TATGACCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCAGAGAATACATATCTTaGGCAGGTCCCAGAAAGCGT +
Preference number: 4 (lower is better)
Translates to: YDQIRVSENTYLGQVPESREYIS*AGPRKR
Trigger: ACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCT...GCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGGTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS CCA 90 bp GCGCTCTCAGCCGGGCTTGCGGACCGCCCGGCCCACGTGCGCTCATaGGGAGCACTCGGTCCCTCGGTCCCTGCGCGCCCGGCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: ALSAGLADRPAHVRS*GALGPSVPARPAPA
Trigger: GGCGGGCGCCGGGCGCGCAGGGACCGAGGGACCGAGTGCTCCCCATGAGCGCACGTGGGCCGGGCGGTCCGCAAGCCCGGCTGAGAGCGC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547933.1
CDS GCA 90 bp CCCATGGCGCGCTCTCAGCCGGGCTTGCGGACCGCCCGGCCCACGTaGGCTCATGGGGAGCACTCGGTCCCTCGGTCCCTGCGCGCCCGG +
Preference number: 5 (lower is better)
Translates to: PMARSQPGLRTARPT*AHGEHSVPRSLRAR
Trigger: CCGGGCGCGCAGGGACCGAGGGACCGAGTGCTCCCCATGAGCGCACGTGGGCCGGGCGGTCCGCAAGCCCGGCTGAGAGCGCGCCATGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000547933.1
ENST00000552276.5
CDS CCA 90 bp AGTGGGCAGGACTCCACCCTCAGGCTGGGACCCACCGCACGGGGCTaGGAAACCCCTCAGGGTCCTGAGGCTGCAGCCACTCACTCCGGC +
Preference number: 5 (lower is better)
Translates to: SGQDSTLRLGPTARG*ETPQGPEAAATHSG
Trigger: GCCGGAGTGAGTGGCTGCAGCCTCAGGACCCTGAGGGGTTTCCCAGCCCCGTGCGGTGGGTCCCAGCCTGAGGGTGGAGTCCTGCCCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547933.1
CDS TCA 90 bp CAGGCTGGGACCCACCGCACGGGGCTGGGAAACCCCTCAGGGTCCTaGGGCTGCAGCCACTCACTCCGGCCTGGAGCTTGTCTCCAACGG +
Preference number: 5 (lower is better)
Translates to: QAGTHRTGLGNPSGS*GCSHSLRPGACLQR
Trigger: CCGTTGGAGACAAGCTCCAGGCCGGAGTGAGTGGCTGCAGCCTCAGGACCCTGAGGGGTTTCCCAGCCCCGTGCGGTGGGTCCCAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547933.1
CDS GCA 90 bp CATACTTCTCGGTCTTGTAGTCGAACAGCGACAGGCAGAGCCCCTTaGAGCCCGCCTGCCCCATGGCGCGCTCTCAGCCGGGCTTGCGGA +
Preference number: 5 (lower is better)
Translates to: HTSRSCSRTATGRAP*SPPAPWRALSRACG
Trigger: TCCGCAAGCCCGGCTGAGAGCGCGCCATGGGGCAGGCGGGCTGCAAGGGGCTCTGCCTGTCGCTGTTCGACTACAAGACCGAGAAGTATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000547933.1
ENST00000551178.5
ENST00000552276.5
CDS CCA 90 bp TGGGTCCCCTGGAGCCTCTGCCCAGGACAGTTAATTTGCTCATGCTaGGGAGGCCGTCGGGCCTCGCTGGGACAGCCTGACTCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: WVPWSLCPGQLICSC*GGRRASLGQPDSSL
Trigger: GAGGGAGGAGTCAGGCTGTCCCAGCGAGGCCCGACGGCCTCCCCAGCATGAGCAAATTAACTGTCCTGGGCAGAGGCTCCAGGGGACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547933.1
CDS CCA 90 bp GGCTCAGCAAGGGGCACCCTTGTCCGACACCACAGAGCTGGTCCATaGTGGAGCTCAAGCTGGACTGGAGCTCCCCCGATCCCACAGGCC +
Preference number: 5 (lower is better)
Translates to: GSARGTLVRHHRAGP*WSSSWTGAPPIPQA
Trigger: GGCCTGTGGGATCGGGGGAGCTCCAGTCCAGCTTGAGCTCCACCATGGACCAGCTCTGTGGTGTCGGACAAGGGTGCCCCTTGCTGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS CCA 90 bp TCAGCAAGGGGCACCCTTGTCCGACACCACAGAGCTGGTCCATGGTaGAGCTCAAGCTGGACTGGAGCTCCCCCGATCCCACAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SARGTLVRHHRAGPW*SSSWTGAPPIPQAR
Trigger: CCTGGCCTGTGGGATCGGGGGAGCTCCAGTCCAGCTTGAGCTCCACCATGGACCAGCTCTGTGGTGTCGGACAAGGGTGCCCCTTGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS-3UTR CAA 90 bp CTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGAGGGAAGCTGCGGCACTaGCAGAGGGGAGTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LRHLQRGVGWNQMEPFSGGKLRH*QRGVGW
Trigger: CCAGCCCACTCCCCTCTGCAAGTGCCGCAGCTTCCC...TCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS CCA 90 bp CGGCCGGTCTTCACTCCGTTTCCAGCTGTAACCGCTTCCCCAGCGTaGCAGTCGCTGTCCTTGGAGCACGCGCCATCAGGAATGCCTTCA +
Preference number: 5 (lower is better)
Translates to: RPVFTPFPAVTASPA*QSLSLEHAPSGMPS
Trigger: TGAAGGCATTCCTGATGGCGCGTGCTCCAAGGACAGCGACTGCCACGCTGGGGAAGCGGTTACAGCTGGAAACGGAGTGAAGACCGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000547933.1
ENST00000551178.5
ENST00000552050.5
ENST00000552276.5
ENST00000552723.1
CDS-3UTR CAA 90 bp GTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGACCTCCGGCCTGGAGCTaGTCTCCAACGGGCACCAGG +
Preference number: 5 (lower is better)
Translates to: VMFPIYNPFPSAGSQPRRPPAWS*SPTGTR
Trigger: CCTGGTGCCCGTTGGAGACAAGCTCCAGGCCGGAGG...TCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp TTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAAGGGAAGCTGCGGCACTaGCAGAGGGGAGTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LQRGVGWNQMEPFSGHAQGKLRH*QRGVGW
Trigger: CCAGCCCACTCCCCTCTGCAAGTGCCGCAGCTTCCC...TTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS CCA 90 bp GGAAGTCGCTCCCGGCCCAGCGGATCACGGAGCCCAGTCGGAAGATaGGGCAGTAGTGGTTCTTGGGGCCAAAGTGGCATGATTTCAGGA +
Preference number: 5 (lower is better)
Translates to: GSRSRPSGSRSPVGR*GSSGSWGQSGMISG
Trigger: TCCTGAAATCATGCCACTTTGGCCCCAAGAACCACTACTGCCCCATCTTCCGACTGGGCTCCGTGATCCGCTGGGCCGGGAGCGACTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552276.5
CDS CCA 90 bp GCACCCAGCACGTGCCAGTGTCTGCACCGAAGTACGGAGAGGATCTaGACAAGAGAGACCTCCTGGGGACTCTCCCTCTGGTGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: APSTCQCLHRSTERI*TRETSWGLSLWCRR
Trigger: TCTCCTGCACCAGAGGGAGAGTCCCCAGGAGGTCTCTCTTGTCCAGATCCTCTCCGTACTTCGGTGCAGACACTGGCACGTGCTGGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS-3UTR CAA 90 bp CTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACATGGCAGTCGCTGTCCTaGGAGCACGCGCCATCAGGA +
Preference number: 5 (lower is better)
Translates to: LAEGSGLEPNGALFRTRTWQSLS*EHAPSG
Trigger: TCCTGATGGCGCGTGCTCCAAGGACAGCGACTGCCA...TGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp ATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAAAGCCTCCGGCCTGGAGCTaGTCTCCAACGGGCACCAGG +
Preference number: 5 (lower is better)
Translates to: MFPIYNPFPSAGSQPRRKPPAWS*SPTGTR
Trigger: CCTGGTGCCCGTTGGAGACAAGCTCCAGGCCGGAGG...CTTTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp AATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGGGGAAGCTGCGGCACTaGCAGAGGGGAGTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: NFPLGSILGFPKAWDHWVGKLRH*QRGVGW
Trigger: CCAGCCCACTCCCCTCTGCAAGTGCCGCAGCTTCCC...CACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CAA 90 bp CCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGACCAAGATCCGAGGTGTaGGTGAAGGCCACGCCCTTG +
Preference number: 5 (lower is better)
Translates to: PVGQHPGIPKGMGSLGARPRSEV*VKATPL
Trigger: CAAGGGCGTGGCCTTCACCAACACCTCGGATCTTGG...TCTAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS CCA 90 bp AGAGGTGGAAGGACATTACGGAGGGAGGAACAAGCCTGTCACATCTaGGAAATGCCGCAGGGCCTGTGCGGGAAGAGGGAGATGCGCTTC +
Preference number: 5 (lower is better)
Translates to: RGGRTLRREEQACHI*EMPQGLCGKREMRF
Trigger: GAAGCGCATCTCCCTCTTCCCGCACAGGCCCTGCGGCATTTCCCAGATGTGACAGGCTTGTTCCTCCCTCCGTAATGTCCTTCCACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS-3UTR CAA 90 bp CCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGAGCCACGCCCTTGACTTaGGTGATGACAGCACTCTGC +
Preference number: 5 (lower is better)
Translates to: PVGQHPGIPKGMGSLGARATPLT*VMTALC
Trigger: GCAGAGTGCTGTCATCACCAAAGTCAAGGGCGTGGC...TCTAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp TGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACCCTCCGGCCTGGAGCTaGTCTCCAACGGGCACCAGG +
Preference number: 5 (lower is better)
Translates to: CTNFPLGSILGFPKAWDHPPAWS*SPTGTR
Trigger: CCTGGTGCCCGTTGGAGACAAGCTCCAGGCCGGAGG...GTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp GTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTCCTCCGGCCTGGAGCTaGTCTCCAACGGGCACCAGG +
Preference number: 5 (lower is better)
Translates to: VQISRWAASWDSQRHGITPPAWS*SPTGTR
Trigger: CCTGGTGCCCGTTGGAGACAAGCTCCAGGCCGGAGG...AGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTCCTCCGGCCTGGAGCTaGTCTCCAACGGGCACCAGG +
Preference number: 5 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVPPAWS*SPTGTR
Trigger: CCTGGTGCCCGTTGGAGACAAGCTCCAGGCCGGAGG...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CAA 90 bp CCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGAGACGTGGAGGTCACTTaGCTCTGTGATGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: PVGQHPGIPKGMGSLGARDVEVT*LCDGWS
Trigger: GGACCAGCCATCACAGAGCAAAGTGACCTCCACGTC...TCTAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CAA 90 bp CTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAGACGTGGAGGTCACTTaGCTCTGTGATGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LAEGSGLEPNGALFRTRTDVEVT*LCDGWS
Trigger: GGACCAGCCATCACAGAGCAAAGTGACCTCCACGTC...TGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CAA 90 bp GCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGAAGCTGCGGCACTaGCAGAGGGGAGTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: APNVQISRWAASWDSQRHGKLRH*QRGVGW
Trigger: CCAGCCCACTCCCCTCTGCAAGTGCCGCAGCTTCCC...ATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CAA 90 bp CAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGCCAAGATCCGAGGTGTaGGTGAAGGCCACGCCCTTG +
Preference number: 5 (lower is better)
Translates to: QISRWAASWDSQRHGITGPRSEV*VKATPL
Trigger: CAAGGGCGTGGCCTTCACCAACACCTCGGATCTTGG...CCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp ACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGTGGCAGTCGCTGTCCTaGGAGCACGCGCCATCAGGA +
Preference number: 5 (lower is better)
Translates to: TNFPLGSILGFPKAWDHWWQSLS*EHAPSG
Trigger: TCCTGATGGCGCGTGCTCCAAGGACAGCGACTGCCA...CCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp CCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGTGGCAGTCGCTGTCCTaGGAGCACGCGCCATCAGGA +
Preference number: 5 (lower is better)
Translates to: PNVQISRWAASWDSQRHGWQSLS*EHAPSG
Trigger: TCCTGATGGCGCGTGCTCCAAGGACAGCGACTGCCA...CCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp GCTGGTCCCTGTGATGTGGCATTGATAGCACCCAATGTACAAATTTCCCGTTGGGGGAAGCTGCGGCACTaGCAGAGGGGAGTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: AGPCDVALIAPNVQISRWGKLRH*QRGVGW
Trigger: CCAGCCCACTCCCCTCTGCAAGTGCCGCAGCTTCCC...CCAACGGGAAATTTGTACATTGGGTGCTATCAATGCCACATCACAGGGACCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CAA 90 bp CTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACATGTCTTCTAGGCCCCTaGCCGTTCACCATCACGTCA +
Preference number: 5 (lower is better)
Translates to: LAEGSGLEPNGALFRTRTCLLGP*PFTITS
Trigger: TGACGTGATGGTGAACGGCAAGGGGCCTAGAAGACA...TGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552456.1
CDS-3UTR CAA 90 bp AGCTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGGAGGTGTCGACGTCTaGGTAACCCTTCTTTATCAG +
Preference number: 5 (lower is better)
Translates to: SCGTCRGEWAGTKWSPFPGGVDV*VTLLYQ
Trigger: CTGATAAAGAAGGGTTACCAAGACGTCGACACCTCC...CGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp CAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGGCCACGCCCTTGACTTaGGTGATGACAGCACTCTGC +
Preference number: 5 (lower is better)
Translates to: QISRWAASWDSQRHGITGATPLT*VMTALC
Trigger: GCAGAGTGCTGTCATCACCAAAGTCAAGGGCGTGGC...CCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp TTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGTGAAGGCCACGCCCTaGACTTTGGTGATGACAGCA +
Preference number: 5 (lower is better)
Translates to: FPLGSILGFPKAWDHWVLVKATP*TLVMTA
Trigger: TGCTGTCATCACCAAAGTCAAGGGCGTGGCCTTCAC...TAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp CCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGCCAAGATCCGAGGTGTaGGTGAAGGCCACGCCCTTG +
Preference number: 5 (lower is better)
Translates to: PNVQISRWAASWDSQRHGPRSEV*VKATPL
Trigger: CAAGGGCGTGGCCTTCACCAACACCTCGGATCTTGG...CCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp AGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATACGTTCTGCCGCTGGTaGGGGGTCACAATCAGGTTG +
Preference number: 5 (lower is better)
Translates to: RGVGWNQMEPFSGHAQCYTFCRW*GVTIRL
Trigger: CAACCTGATTGTGACCCCCAACCAGCGGCAGAACGT...ATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225328.10
ENST00000547178.5
CDS-3UTR CAA 90 bp CGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGACGTTCTGCCGCTGGTaGGGGGTCACAATCAGGTTG +
Preference number: 5 (lower is better)
Translates to: RKEVMFPIYNPFPSAGSQTFCRW*GVTIRL
Trigger: CAACCTGATTGTGACCCCCAACCAGCGGCAGAACGT...CTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225328.10
ENST00000547178.5
CDS GCA 90 bp CCCATCCAATCGTTCCTTCAACACATTTGCTGGGCACCCAGCACGTaGCAGTGTCTGCACCGAAGTACGGAGAGGATCTGGACAAGAGAG +
Preference number: 5 (lower is better)
Translates to: PIQSFLQHICWAPST*QCLHRSTERIWTRE
Trigger: CTCTCTTGTCCAGATCCTCTCCGTACTTCGGTGCAGACACTGGCACGTGCTGGGTGCCCAGCAAATGTGTTGAAGGAACGATTGGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS-3UTR CAA 90 bp CTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAGGAGGTGTCGACGTCTaGGTAACCCTTCTTTATCAG +
Preference number: 5 (lower is better)
Translates to: LAEGSGLEPNGALFRTRTGGVDV*VTLLYQ
Trigger: CTGATAAAGAAGGGTTACCAAGACGTCGACACCTCC...TGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp TGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTGCCACGCCCTTGACTTaGGTGATGACAGCACTCTGC +
Preference number: 5 (lower is better)
Translates to: WAGTKWSPFPDTHNAIPSATPLT*VMTALC
Trigger: GCAGAGTGCTGTCATCACCAAAGTCAAGGGCGTGGC...ACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp CCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGGCCACGCCCTTGACTTaGGTGATGACAGCACTCTGC +
Preference number: 5 (lower is better)
Translates to: PNVQISRWAASWDSQRHGATPLT*VMTALC
Trigger: GCAGAGTGCTGTCATCACCAAAGTCAAGGGCGTGGC...CCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp GGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCGTGAAGGCCACGCCCTaGACTTTGGTGATGACAGCA +
Preference number: 5 (lower is better)
Translates to: GRKSCSPFTTRSLVREASVKATP*TLVMTA
Trigger: TGCTGTCATCACCAAAGTCAAGGGCGTGGCCTTCAC...GCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp AGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATGTGAAGGCCACGCCCTaGACTTTGGTGATGACAGCA +
Preference number: 5 (lower is better)
Translates to: RGVGWNQMEPFSGHAQCYVKATP*TLVMTA
Trigger: TGCTGTCATCACCAAAGTCAAGGGCGTGGCCTTCAC...ATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp TGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACCCAAGATCCGAGGTGTaGGTGAAGGCCACGCCCTTG +
Preference number: 5 (lower is better)
Translates to: CTNFPLGSILGFPKAWDHPRSEV*VKATPL
Trigger: CAAGGGCGTGGCCTTCACCAACACCTCGGATCTTGG...GTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp ATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGTGGCAGTCGCTGTCCTaGGAGCACGCGCCATCAGGA +
Preference number: 5 (lower is better)
Translates to: IAPNVQISRWAASWDSQRWQSLS*EHAPSG
Trigger: TCCTGATGGCGCGTGCTCCAAGGACAGCGACTGCCA...CCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCTGGCAGTCGCTGTCCTaGGAGCACGCGCCATCAGGA +
Preference number: 5 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSWQSLS*EHAPSG
Trigger: TCCTGATGGCGCGTGCTCCAAGGACAGCGACTGCCA...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CAA 90 bp TTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAACTGGCAAATCTGAAGTaGTACCCGGAGGAGACAGAC +
Preference number: 5 (lower is better)
Translates to: LQRGVGWNQMEPFSGHAQLANLK*YPEETD
Trigger: GTCTGTCTCCTCCGGGTACAACTTCAGATTTGCCAG...TTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp ATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCCAGAAGAAAGCACCCTaGCCGTTCACCATCACGTCA +
Preference number: 5 (lower is better)
Translates to: ISRWAASWDSQRHGITGCQKKAP*PFTITS
Trigger: TGACGTGATGGTGAACGGCAAGGGTGCTTTCTTCTG...GCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp CCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGACTGTACAAATTTCCCGTaGGGCAGCATCCTGGGATTC +
Preference number: 5 (lower is better)
Translates to: PLGSILGFPKAWDHWVLDCTNFP*GSILGF
Trigger: GAATCCCAGGATGCTGCCCAACGGGAAATTTGTACA...GTCTAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CAA 90 bp CCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTAGATGTACAAATTTCCCGTaGGGCAGCATCCTGGGATTC +
Preference number: 5 (lower is better)
Translates to: PVGQHPGIPKGMGSLGARCTNFP*GSILGF
Trigger: GAATCCCAGGATGCTGCCCAACGGGAAATTTGTACA...TCTAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CAA 90 bp CTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACATGTACAAATTTCCCGTaGGGCAGCATCCTGGGATTC +
Preference number: 5 (lower is better)
Translates to: LAEGSGLEPNGALFRTRTCTNFP*GSILGF
Trigger: GAATCCCAGGATGCTGCCCAACGGGAAATTTGTACA...TGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CAA 90 bp GCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACCCTGTGATGTGGCATaGATAGCACCCAATGTACAA +
Preference number: 5 (lower is better)
Translates to: AALAEGSGLEPNGALFRTPCDVA*IAPNVQ
Trigger: TTGTACATTGGGTGCTATCAATGCCACATCACAGGG...TGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CAA 90 bp GAGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCGACGTGGAGGTCACTTaGCTCTGTGATGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: EVLKDSGRKSCSPFTTRSDVEVT*LCDGWS
Trigger: GGACCAGCCATCACAGAGCAAAGTGACCTCCACGTC...GGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CAA 90 bp AAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGACGTGGAGGTCACTTaGCTCTGTGATGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: KFPVGQHPGIPKGMGSLGDVEVT*LCDGWS
Trigger: GGACCAGCCATCACAGAGCAAAGTGACCTCCACGTC...ACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CAA 90 bp GTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGAGCAGGCCCACCTTCTaGTTCTTGGCGATGACATAC +
Preference number: 5 (lower is better)
Translates to: VGWNQMEPFSGHAQCYSQSRPTF*FLAMTY
Trigger: GTATGTCATCGCCAAGAACAAGAAGGTGGGCCTGCT...CTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTGCCACGCCCTTGACTTaGGTGATGACAGCACTCTGC +
Preference number: 5 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVATPLT*VMTALC
Trigger: GCAGAGTGCTGTCATCACCAAAGTCAAGGGCGTGGC...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CAA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCCCAAGATCCGAGGTGTaGGTGAAGGCCACGCCCTTG +
Preference number: 5 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSPRSEV*VKATPL
Trigger: CAAGGGCGTGGCCTTCACCAACACCTCGGATCTTGG...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CAA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTACGTTCTGCCGCTGGTaGGGGGTCACAATCAGGTTG +
Preference number: 5 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVTFCRW*GVTIRL
Trigger: CAACCTGATTGTGACCCCCAACCAGCGGCAGAACGT...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CAA 90 bp CTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGATTGGAGAAGTTGAATTaGGGGAAACGGATGTGGTTC +
Preference number: 5 (lower is better)
Translates to: LRHLQRGVGWNQMEPFSGLEKLN*GKRMWF
Trigger: GAACCACATCCGTTTCCCCAAATTCAACTTCTCCAA...TCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp TCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAACTGGCAAATCTGAAGTaGTACCCGGAGGAGACAGAC +
Preference number: 5 (lower is better)
Translates to: SCSPFTTRSLVREASHGELANLK*YPEETD
Trigger: GTCTGTCTCCTCCGGGTACAACTTCAGATTTGCCAG...TTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp CAAAAAGACAGCCATGATGGGTCCGTCCTGATGACCCCAGCATCAGACGTGGAGCTGGCAAATCTGAAGTaGTACCCGGAGGAGACAGAC +
Preference number: 5 (lower is better)
Translates to: QKDSHDGSVLMTPASDVELANLK*YPEETD
Trigger: GTCTGTCTCCTCCGGGTACAACTTCAGATTTGCCAG...CTCCACGTCTGATGCTGGGGTCATCAGGACGGACCCATCATGGCTGTCTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp AATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCAGAAGAAAGCACCCTaGCCGTTCACCATCACGTCA +
Preference number: 5 (lower is better)
Translates to: NFPLGSILGFPKAWDHWVQKKAP*PFTITS
Trigger: TGACGTGATGGTGAACGGCAAGGGTGCTTTCTTCTG...CACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp TTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGTACAAATTTCCCGTaGGGCAGCATCCTGGGATTC +
Preference number: 5 (lower is better)
Translates to: LQRGVGWNQMEPFSGHAQCTNFP*GSILGF
Trigger: GAATCCCAGGATGCTGCCCAACGGGAAATTTGTACA...TTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CAA 90 bp TGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACGACGTGGAGGTCACTTaGCTCTGTGATGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: CTNFPLGSILGFPKAWDHDVEVT*LCDGWS
Trigger: GGACCAGCCATCACAGAGCAAAGTGACCTCCACGTC...GTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CAA 90 bp TTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTACAGAGAATACATATCTaGGGCAGGTCCCAGAAAGCG +
Preference number: 5 (lower is better)
Translates to: FPLGSILGFPKAWDHWVLQRIHI*GRSQKA
Trigger: CGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTG...TAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CAA 90 bp ATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAAAGCTTTTATTGACGCGGTaGAGAAAGCCTCGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: MFPIYNPFPSAGSQPRRKLLLTR*RKPRLG
Trigger: TCCCAGCCGAGGCTTTCTCAACCGCGTCAATAAAAG...CTTTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345901.7
CDS-3UTR CAA 90 bp ATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAAAGCCCACCTTCTTGTTCTaGGCGATGACATACTTCTCG +
Preference number: 5 (lower is better)
Translates to: MFPIYNPFPSAGSQPRRKPTFLF*AMTYFS
Trigger: CGAGAAGTATGTCATCGCCAAGAACAAGAAGGTGGG...CTTTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp AGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATGGAGGTGTCGACGTCTaGGTAACCCTTCTTTATCAG +
Preference number: 5 (lower is better)
Translates to: RGVGWNQMEPFSGHAQCYGGVDV*VTLLYQ
Trigger: CTGATAAAGAAGGGTTACCAAGACGTCGACACCTCC...ATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp TGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTCAGAAGAAAGCACCCTaGCCGTTCACCATCACGTCA +
Preference number: 5 (lower is better)
Translates to: WAGTKWSPFPDTHNAIPSQKKAP*PFTITS
Trigger: TGACGTGATGGTGAACGGCAAGGGTGCTTTCTTCTG...ACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp GTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTGTACAAATTTCCCGTaGGGCAGCATCCTGGGATTC +
Preference number: 5 (lower is better)
Translates to: VGWNQMEPFSGHAQCYSQCTNFP*GSILGF
Trigger: GAATCCCAGGATGCTGCCCAACGGGAAATTTGTACA...CTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CAA 90 bp TGGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTAGACGTGGAGGTCACTTaGCTCTGTGATGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: WQEGGVFRRESTWIHWRVDVEVT*LCDGWS
Trigger: GGACCAGCCATCACAGAGCAAAGTGACCTCCACGTC...TACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CAA 90 bp TGGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTACGGGGCGGCCTTTTATaGACGCGGTTGAGAAAGCCT +
Preference number: 5 (lower is better)
Translates to: WQEGGVFRRESTWIHWRVRGGLL*TRLRKP
Trigger: AGGCTTTCTCAACCGCGTCAATAAAAGGCCGCCCCG...TACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345901.7
CDS TCA 90 bp GTCAGCTCCCAAGCCCAACATCGAAACGTACTTCATGTCCATTTTTaGCAGGGGAGACTGGGTCTTAAGCGCCAGCGTCAGGAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: VSSQAQHRNVLHVHF*QGRLGLKRQRQEKF
Trigger: GAACTTCTCCTGACGCTGGCGCTTAAGACCCAGTCTCCCCTGTCAAAAATGGACATGAAGTACGTTTCGATGTTGGGCTTGGGAGCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS-3UTR CAA 90 bp ACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGCCCACCTTCTTGTTCTaGGCGATGACATACTTCTCG +
Preference number: 5 (lower is better)
Translates to: TNFPLGSILGFPKAWDHWPTFLF*AMTYFS
Trigger: CGAGAAGTATGTCATCGCCAAGAACAAGAAGGTGGG...CCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp GAGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCCCACCTTCTTGTTCTaGGCGATGACATACTTCTCG +
Preference number: 5 (lower is better)
Translates to: EVLKDSGRKSCSPFTTRSPTFLF*AMTYFS
Trigger: CGAGAAGTATGTCATCGCCAAGAACAAGAAGGTGGG...GGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp GAGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCGGAGGTGTCGACGTCTaGGTAACCCTTCTTTATCAG +
Preference number: 5 (lower is better)
Translates to: EVLKDSGRKSCSPFTTRSGGVDV*VTLLYQ
Trigger: CTGATAAAGAAGGGTTACCAAGACGTCGACACCTCC...GGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp GGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTATGTGAAGGCCACGCCCTaGACTTTGGTGATGACAGCA +
Preference number: 5 (lower is better)
Translates to: GRKVVSLGERVLGSTGEYVKATP*TLVMTA
Trigger: TGCTGTCATCACCAAAGTCAAGGGCGTGGCCTTCAC...ATACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTGAAGGCCACGCCCTaGACTTTGGTGATGACAGCA +
Preference number: 5 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSVKATP*TLVMTA
Trigger: TGCTGTCATCACCAAAGTCAAGGGCGTGGCCTTCAC...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CAA 90 bp CTGCGGCACTTGCAGAGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGATTGACGTCCATCACATaGCTTTTGGAGAAGTTGAAT +
Preference number: 5 (lower is better)
Translates to: LRHLQRGVGWNQMEPFSGLTSIT*LLEKLN
Trigger: ATTCAACTTCTCCAAAAGCAATGTGATGGACGTCAA...TCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCTCTGCAAGTGCCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225328.10
ENST00000345901.7
CDS-3UTR CAA 90 bp TTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTACGGAGGAGACAGACTTaGAAAGTTTATTGTCCAGAC +
Preference number: 5 (lower is better)
Translates to: FPLGSILGFPKAWDHWVLRRRQT*KVYCPD
Trigger: GTCTGGACAATAAACTTTCAAAGTCTGTCTCCTCCG...TAGCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp ATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCCGGAGGAGACAGACTTaGAAAGTTTATTGTCCAGAC +
Preference number: 5 (lower is better)
Translates to: ISRWAASWDSQRHGITGCRRRQT*KVYCPD
Trigger: GTCTGGACAATAAACTTTCAAAGTCTGTCTCCTCCG...GCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp GCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATCTGGCAAATCTGAAGTaGTACCCGGAGGAGACAGAC +
Preference number: 5 (lower is better)
Translates to: APNVQISRWAASWDSQRHLANLK*YPEETD
Trigger: GTCTGTCTCCTCCGGGTACAACTTCAGATTTGCCAG...ATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp CATCTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGACAGAAGAAAGCACCCTaGCCGTTCACCATCACGTCA +
Preference number: 5 (lower is better)
Translates to: HLPHFNSVYWPKGKQLAGQKKAP*PFTITS
Trigger: TGACGTGATGGTGAACGGCAAGGGTGCTTTCTTCTG...TCCTGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp AGGGGAGTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATCCCTGTGATGTGGCATaGATAGCACCCAATGTACAA +
Preference number: 5 (lower is better)
Translates to: RGVGWNQMEPFSGHAQCYPCDVA*IAPNVQ
Trigger: TTGTACATTGGGTGCTATCAATGCCACATCACAGGG...ATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCACTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CAA 90 bp CAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGCCCTGTGATGTGGCATaGATAGCACCCAATGTACAA +
Preference number: 5 (lower is better)
Translates to: QISRWAASWDSQRHGITGPCDVA*IAPNVQ
Trigger: TTGTACATTGGGTGCTATCAATGCCACATCACAGGG...CCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CAA 90 bp GAGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCAGAGAATACATATCTaGGGCAGGTCCCAGAAAGCG +
Preference number: 5 (lower is better)
Translates to: EVLKDSGRKSCSPFTTRSQRIHI*GRSQKA
Trigger: CGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTG...GGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CAA 90 bp AGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCCAGAGAATACATATCTaGGGCAGGTCCCAGAAAGCG +
Preference number: 5 (lower is better)
Translates to: RCSRTPEGSHVPHLQPVPQRIHI*GRSQKA
Trigger: CGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTG...GGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CAA 90 bp GTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAACGTCCATCACATTGTaGGAGAAGTTGAATTTGGGG +
Preference number: 5 (lower is better)
Translates to: VMFPIYNPFPSAGSQPRRTSITL*EKLNLG
Trigger: CCCCAAATTCAACTTCTCCAACAATGTGATGGACGT...TCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547178.5
ENST00000551178.5
CDS CCA 90 bp CCCAACATCGAAACGTACTTCATGTCCATTTTTGACAGGGGAGACTaGGTCTTAAGCGCCAGCGTCAGGAGAAGTTCATTACCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: PNIETYFMSIFDRGD*VLSASVRRSSLPVG
Trigger: CCCCACAGGTAATGAACTTCTCCTGACGCTGGCGCTTAAGACCCAGTCTCCCCTGTCAAAAATGGACATGAAGTACGTTTCGATGTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS-3UTR CAA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTCCCACCTTCTTGTTCTaGGCGATGACATACTTCTCG +
Preference number: 5 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVPTFLF*AMTYFS
Trigger: CGAGAAGTATGTCATCGCCAAGAACAAGAAGGTGGG...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CAA 90 bp ATGGCTGGTCCCTGTGATGTGGCATTGATAGCACCCAATGTACAAATTTCCCGTGTGAAGGCCACGCCCTaGACTTTGGTGATGACAGCA +
Preference number: 5 (lower is better)
Translates to: MAGPCDVALIAPNVQISRVKATP*TLVMTA
Trigger: TGCTGTCATCACCAAAGTCAAGGGCGTGGCCTTCAC...ACGGGAAATTTGTACATTGGGTGCTATCAATGCCACATCACAGGGACCAGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp CCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAAAGGAAGAATTGGAGAAGTTGAATTaGGGGAAACGGATGTGGTTC +
Preference number: 5 (lower is better)
Translates to: PIYNPFPSAGSQPRRKEELEKLN*GKRMWF
Trigger: GAACCACATCCGTTTCCCCAAATTCAACTTCTCCAA...TTCTTCCTTTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp CAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTTGGAGAAGTTGAATTaGGGGAAACGGATGTGGTTC +
Preference number: 5 (lower is better)
Translates to: QISRWAASWDSQRHGITGLEKLN*GKRMWF
Trigger: GAACCACATCCGTTTCCCCAAATTCAACTTCTCCAA...CCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp GTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGATCCATCACATTGCTTTaGGAGAAGTTGAATTTGGGG +
Preference number: 5 (lower is better)
Translates to: VMFPIYNPFPSAGSQPRRSITLL*EKLNLG
Trigger: CCCCAAATTCAACTTCTCCAAAAGCAATGTGATGGA...TCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225328.10
ENST00000345901.7
CDS-3UTR CAA 90 bp ATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTGCTCCATCACATTGCTTTaGGAGAAGTTGAATTTGGGG +
Preference number: 5 (lower is better)
Translates to: ISRWAASWDSQRHGITGCSITLL*EKLNLG
Trigger: CCCCAAATTCAACTTCTCCAAAAGCAATGTGATGGA...GCACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000552050.5
CDS-3UTR CAA 90 bp GGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCGGAGGAGACAGACTTaGAAAGTTTATTGTCCAGAC +
Preference number: 5 (lower is better)
Translates to: GRKSCSPFTTRSLVREASRRRQT*KVYCPD
Trigger: GTCTGGACAATAAACTTTCAAAGTCTGTCTCCTCCG...GCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGACTTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCCTGGCAAATCTGAAGTaGTACCCGGAGGAGACAGAC +
Preference number: 5 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSLANLK*YPEETD
Trigger: GTCTGTCTCCTCCGGGTACAACTTCAGATTTGCCAG...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CAA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCCAGAAGAAAGCACCCTaGCCGTTCACCATCACGTCA +
Preference number: 5 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSQKKAP*PFTITS
Trigger: TGACGTGATGGTGAACGGCAAGGGTGCTTTCTTCTG...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CAA 90 bp CATCTCCCCCACTTTAATTCTGTGTACTGGCCTAAGGGCAAACAGCTGGCAGGATGTACAAATTTCCCGTaGGGCAGCATCCTGGGATTC +
Preference number: 5 (lower is better)
Translates to: HLPHFNSVYWPKGKQLAGCTNFP*GSILGF
Trigger: GAATCCCAGGATGCTGCCCAACGGGAAATTTGTACA...TCCTGCCAGCTGTTTGCCCTTAGGCCAGTACACAGAATTAAAGTGGGGGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CAA 90 bp ACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGCCCTGTGATGTGGCATaGATAGCACCCAATGTACAA +
Preference number: 5 (lower is better)
Translates to: TNFPLGSILGFPKAWDHWPCDVA*IAPNVQ
Trigger: TTGTACATTGGGTGCTATCAATGCCACATCACAGGG...CCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CAA 90 bp CCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGCCCTGTGATGTGGCATaGATAGCACCCAATGTACAA +
Preference number: 5 (lower is better)
Translates to: PNVQISRWAASWDSQRHGPCDVA*IAPNVQ
Trigger: TTGTACATTGGGTGCTATCAATGCCACATCACAGGG...CCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS TCA 90 bp CAGTCGGAAGATGGGGCAGTAGTGGTTCTTGGGGCCAAAGTGGCATaGTTTCAGGAAAGATCTGTCCTTGACGTCCATCACATTGTTGGA +
Preference number: 5 (lower is better)
Translates to: QSEDGAVVVLGAKVA*FQERSVLDVHHIVG
Trigger: TCCAACAATGTGATGGACGTCAAGGACAGATCTTTCCTGAAATCATGCCACTTTGGCCCCAAGAACCACTACTGCCCCATCTTCCGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547178.5
ENST00000551178.5
ENST00000552276.5
CDS-3UTR CAA 90 bp ATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCAGGAGGTGTCGACGTCTaGGTAACCCTTCTTTATCAG +
Preference number: 5 (lower is better)
Translates to: MYKFPVGQHPGIPKGMGSGGVDV*VTLLYQ
Trigger: CTGATAAAGAAGGGTTACCAAGACGTCGACACCTCC...TGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGGAGGTGTCGACGTCTaGGTAACCCTTCTTTATCAG +
Preference number: 5 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSGGVDV*VTLLYQ
Trigger: CTGATAAAGAAGGGTTACCAAGACGTCGACACCTCC...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CAA 90 bp TATGACCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCCCAAGATCCGAGGTGTaGGTGAAGGCCACGCCCTTG +
Preference number: 5 (lower is better)
Translates to: YDQIRVSENTYLGQVPESPRSEV*VKATPL
Trigger: CAAGGGCGTGGCCTTCACCAACACCTCGGATCTTGG...GCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGGTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp TCATGTTCCCCATTTACAACCCGTTCCCTAGTGCGGGAAGCCAGCCACGGAGAATCCATCACATTGCTTTaGGAGAAGTTGAATTTGGGG +
Preference number: 5 (lower is better)
Translates to: SCSPFTTRSLVREASHGESITLL*EKLNLG
Trigger: CCCCAAATTCAACTTCTCCAAAAGCAATGTGATGGA...TTCTCCGTGGCTGGCTTCCCGCACTAGGGAACGGGTTGTAAATGGGGAACATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225328.10
ENST00000345901.7
CDS-3UTR CAA 90 bp AAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGGTAGGAAAGATCTGTCCTaGACGTCCATCACATTGCTT +
Preference number: 5 (lower is better)
Translates to: KFPVGQHPGIPKGMGSLGRKDLS*TSITLL
Trigger: AAGCAATGTGATGGACGTCAAGGACAGATCTTTCCT...ACCCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000552050.5
CDS-3UTR CAA 90 bp GGCATTGATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCAGAGAATACATATCTaGGGCAGGTCCCAGAAAGCG +
Preference number: 5 (lower is better)
Translates to: GIDSTQCTNFPLGSILGFQRIHI*GRSQKA
Trigger: CGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTG...GAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTATCAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552456.1
CDS-3UTR CAA 90 bp GAGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCACGTCCATCACATTGTaGGAGAAGTTGAATTTGGGG +
Preference number: 5 (lower is better)
Translates to: EVLKDSGRKSCSPFTTRSTSITL*EKLNLG
Trigger: CCCCAAATTCAACTTCTCCAACAATGTGATGGACGT...GGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547178.5
ENST00000551178.5
CDS TCA 90 bp CAGTCGGAAGATGGGGCAGTAGTGGTTCTTGGGGCCAAAGTGGCATaGTTTCAGGAAAGATCTGTCCTTGACGTCCATCACATTGCTTTT +
Preference number: 5 (lower is better)
Translates to: QSEDGAVVVLGAKVA*FQERSVLDVHHIAF
Trigger: AAAAGCAATGTGATGGACGTCAAGGACAGATCTTTCCTGAAATCATGCCACTTTGGCCCCAAGAACCACTACTGCCCCATCTTCCGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000552050.5
CDS-3UTR CAA 90 bp CACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGTTGGAGAAGTTGAATTaGGGGAAACGGATGTGGTTC +
Preference number: 5 (lower is better)
Translates to: HPMYKFPVGQHPGIPKGMLEKLN*GKRMWF
Trigger: GAACCACATCCGTTTCCCCAAATTCAACTTCTCCAA...CATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp AGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCAAGGAAAGATCTGTCCTaGACGTCCATCACATTGCTT +
Preference number: 5 (lower is better)
Translates to: STQCTNFPLGSILGFPKARKDLS*TSITLL
Trigger: AAGCAATGTGATGGACGTCAAGGACAGATCTTTCCT...TGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000552050.5
CDS-3UTR CAA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTCGGAGGAGACAGACTTaGAAAGTTTATTGTCCAGAC +
Preference number: 5 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVRRRQT*KVYCPD
Trigger: GTCTGGACAATAAACTTTCAAAGTCTGTCTCCTCCG...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CAA 90 bp CCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGCTGGCAAATCTGAAGTaGTACCCGGAGGAGACAGAC +
Preference number: 5 (lower is better)
Translates to: PNKSVREYISWAGPRKRLLANLK*YPEETD
Trigger: GTCTGTCTCCTCCGGGTACAACTTCAGATTTGCCAG...CAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp CCAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGCAGAAGAAAGCACCCTaGCCGTTCACCATCACGTCA +
Preference number: 5 (lower is better)
Translates to: PNKSVREYISWAGPRKRLQKKAP*PFTITS
Trigger: TGACGTGATGGTGAACGGCAAGGGTGCTTTCTTCTG...CAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp GCTGGTCCCTGTGATGTGGCATTGATAGCACCCAATGTACAAATTTCCCGTTGGCCCTGTGATGTGGCATaGATAGCACCCAATGTACAA +
Preference number: 5 (lower is better)
Translates to: AGPCDVALIAPNVQISRWPCDVA*IAPNVQ
Trigger: TTGTACATTGGGTGCTATCAATGCCACATCACAGGG...CCAACGGGAAATTTGTACATTGGGTGCTATCAATGCCACATCACAGGGACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552456.1
CDS-3UTR CAA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCTTGGAGAAGTTGAATTaGGGGAAACGGATGTGGTTC +
Preference number: 5 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSLEKLN*GKRMWF
Trigger: GAACCACATCCGTTTCCCCAAATTCAACTTCTCCAA...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CAA 90 bp ACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATCACTGGTTGACGTCCATCACATaGCTTTTGGAGAAGTTGAAT +
Preference number: 5 (lower is better)
Translates to: TNFPLGSILGFPKAWDHWLTSIT*LLEKLN
Trigger: ATTCAACTTCTCCAAAAGCAATGTGATGGACGTCAA...CCAGTGATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000552050.5
CDS-3UTR CAA 90 bp GTGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGGACTTTGAAAGTTTATaGTCCAGACGGCTAAAAGAA +
Preference number: 5 (lower is better)
Translates to: VGWNQMEPFSGHAQCYSQDFESL*SRRLKE
Trigger: TTCTTTTAGCCGTCTGGACAATAAACTTTCAAAGTC...CTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp CAAAAAGACAGCCATGATGGGTCCGTCCTGATGACCCCAGCATCAGACGTGGAGGACTTTGAAAGTTTATaGTCCAGACGGCTAAAAGAA +
Preference number: 5 (lower is better)
Translates to: QKDSHDGSVLMTPASDVEDFESL*SRRLKE
Trigger: TTCTTTTAGCCGTCTGGACAATAAACTTTCAAAGTC...CTCCACGTCTGATGCTGGGGTCATCAGGACGGACCCATCATGGCTGTCTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
CDS-3UTR CAA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCACGTCCATCACATTGTaGGAGAAGTTGAATTTGGGG +
Preference number: 5 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSTSITL*EKLNLG
Trigger: CCCCAAATTCAACTTCTCCAACAATGTGATGGACGT...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CAA 90 bp GCTGGTCCCTGTGATGTGGCATTGATAGCACCCAATGTACAAATTTCCCGTTGGAGGAAAGATCTGTCCTaGACGTCCATCACATTGTTG +
Preference number: 5 (lower is better)
Translates to: AGPCDVALIAPNVQISRWRKDLS*TSITLL
Trigger: CAACAATGTGATGGACGTCAAGGACAGATCTTTCCT...CCAACGGGAAATTTGTACATTGGGTGCTATCAATGCCACATCACAGGGACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp ATAGCACCCAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGAGGAAAGATCTGTCCTaGACGTCCATCACATTGTTG +
Preference number: 5 (lower is better)
Translates to: IAPNVQISRWAASWDSQRRKDLS*TSITLL
Trigger: CAACAATGTGATGGACGTCAAGGACAGATCTTTCCT...CCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTGGGTGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCAGGAAAGATCTGTCCTaGACGTCCATCACATTGTTG +
Preference number: 5 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSRKDLS*TSITLL
Trigger: CAACAATGTGATGGACGTCAAGGACAGATCTTTCCT...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CAA 90 bp GAGGTGCTCAAGGACTCCGGAAGGAAGTCATGTTCCCCATTTACAACCCGTTCCGACTTTGAAAGTTTATaGTCCAGACGGCTAAAAGAA +
Preference number: 5 (lower is better)
Translates to: EVLKDSGRKSCSPFTTRSDFESL*SRRLKE
Trigger: TTCTTTTAGCCGTCTGGACAATAAACTTTCAAAGTC...GGAACGGGTTGTAAATGGGGAACATGACTTCCTTCCGGAGTCCTTGAGCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp TGGGCTGGAACCAAATGGAGCCCTTTTCCGGACACGCACAATGCTATTCCCAGTGACTTTGAAAGTTTATaGTCCAGACGGCTAAAAGAA +
Preference number: 5 (lower is better)
Translates to: WAGTKWSPFPDTHNAIPSDFESL*SRRLKE
Trigger: TTCTTTTAGCCGTCTGGACAATAAACTTTCAAAGTC...ACTGGGAATAGCATTGTGCGTGTCCGGAAAAGGGCTCCATTTGGTTCCAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp CAATGTACAAATTTCCCGTTGGGCAGCATCCTGGGATTCCCAAAGGCATGGGATTTGACGTCCATCACATaGCTTTTGGAGAAGTTGAAT +
Preference number: 5 (lower is better)
Translates to: QCTNFPLGSILGFPKAWDLTSIT*LLEKLN
Trigger: ATTCAACTTCTCCAAAAGCAATGTGATGGACGTCAA...ATCCCATGCCTTTGGGAATCCCAGGATGCTGCCCAACGGGAAATTTGTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000552050.5
CDS-3UTR CAA 90 bp GCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCGTTGACTTTGAAAGTTTATaGTCCAGACGGCTAAAAGAA +
Preference number: 5 (lower is better)
Translates to: AHGQSWKWIWDPDLLNSVDFESL*SRRLKE
Trigger: TTCTTTTAGCCGTCTGGACAATAAACTTTCAAAGTC...AACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CAA 90 bp CAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGCCGGAGGAGACAGACTTaGAAAGTTTATTGTCCAGAC +
Preference number: 5 (lower is better)
Translates to: QIRVSENTYLGQVPESVCRRRQT*KVYCPD
Trigger: GTCTGGACAATAAACTTTCAAAGTCTGTCTCCTCCG...GCAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp GGCAGGAAGGTGGTGTCTTTAGGAGAGAGAGTACTTGGATCCACTGGAGAGTATTTGACGTCCATCACATaGTTGGAGAAGTTGAATTTG +
Preference number: 5 (lower is better)
Translates to: GRKVVSLGERVLGSTGEYLTSIT*LEKLNL
Trigger: CAAATTCAACTTCTCCAACAATGTGATGGACGTCAA...ATACTCTCCAGTGGATCCAAGTACTCTCTCTCCTAAAGACACCACCTTCCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547178.5
ENST00000551178.5
CDS-3UTR CAA 90 bp ATAGCCCATGGCCAGTCATGGAAATGGATCTGGGACCCAGACCTGTTAAATTCCTTGACGTCCATCACATaGTTGGAGAAGTTGAATTTG +
Preference number: 5 (lower is better)
Translates to: IAHGQSWKWIWDPDLLNSLTSIT*LEKLNL
Trigger: CAAATTCAACTTCTCCAACAATGTGATGGACGTCAA...GGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS-3UTR CAA 90 bp CAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGCTTGACGTCCATCACATaGTTGGAGAAGTTGAATTTG +
Preference number: 5 (lower is better)
Translates to: QIRVSENTYLGQVPESVCLTSIT*LEKLNL
Trigger: CAAATTCAACTTCTCCAACAATGTGATGGACGTCAA...GCAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547178.5
ENST00000551178.5
CDS TCA 90 bp GTAATATCTGGCAAATCTGAAGTTGTACCCGGAGGAGACAGACTTTaGAAGTTTATTGTCCAGACGGTTGGAGAAGTTGAATTTGGGGAA +
Preference number: 5 (lower is better)
Translates to: VISGKSEVVPGGDRL*KFIVQTVGEVEFGE
Trigger: TTCCCCAAATTCAACTTCTCCAACCGTCTGGACAATAAACTTTCAAAGTCTGTCTCCTCCGGGTACAACTTCAGATTTGCCAGATATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000550772.1
ENST00000552723.1
CDS-3UTR CAA 90 bp CAAATAAGAGTGTCAGAGAATACATATCTTGGGCAGGTCCCAGAAAGCGTCTGCGACTTTGAAAGTTTATaGTCCAGACGGCTAAAAGAA +
Preference number: 5 (lower is better)
Translates to: QIRVSENTYLGQVPESVCDFESL*SRRLKE
Trigger: TTCTTTTAGCCGTCTGGACAATAAACTTTCAAAGTC...GCAGACGCTTTCTGGGACCTGCCCAAGATATGTATTCTCTGACACTCTTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
CDS CCA 72 bp GCCGGGCTTGCGGACCGCCCGGCCCACGTGCGCTCATaGGGAGCACTCGGTCCCTCGGTCCCTGCGCGCCCG +
Preference number: 6 (lower is better)
Translates to: AGLADRPAHVRS*GALGPSVPARP
Trigger: CGGGCGCGCAGGGACCGAGGGACCGAGTGCTCCCCATGAGCGCACGTGGGCCGGGCGGTCCGCAAGCCCGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000547933.1
ENST00000552276.5
CDS GCA 72 bp CGCTCTCAGCCGGGCTTGCGGACCGCCCGGCCCACGTaGGCTCATGGGGAGCACTCGGTCCCTCGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: RSQPGLRTARPT*AHGEHSVPRSL
Trigger: CAGGGACCGAGGGACCGAGTGCTCCCCATGAGCGCACGTGGGCCGGGCGGTCCGCAAGCCCGGCTGAGAGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000547933.1
ENST00000552276.5
CDS GCA 72 bp CGGTCTTGTAGTCGAACAGCGACAGGCAGAGCCCCTTaGAGCCCGCCTGCCCCATGGCGCGCTCTCAGCCGG +
Preference number: 6 (lower is better)
Translates to: RSCSRTATGRAP*SPPAPWRALSR
Trigger: CCGGCTGAGAGCGCGCCATGGGGCAGGCGGGCTGCAAGGGGCTCTGCCTGTCGCTGTTCGACTACAAGACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000547933.1
ENST00000551178.5
ENST00000552276.5
CDS CCA 72 bp CCACAGAGCTGGTCCATGGTGGAGCTCAAGCTGGACTaGAGCTCCCCCGATCCCACAGGCCAGGCACTCCCC +
Preference number: 6 (lower is better)
Translates to: PQSWSMVELKLD*SSPDPTGQALP
Trigger: GGGGAGTGCCTGGCCTGTGGGATCGGGGGAGCTCCAGTCCAGCTTGAGCTCCACCATGGACCAGCTCTGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS CCA 72 bp CCAACGGGCACCAGGCAAAGATCTCACAGGTGCCCCTaGCCAAGTTCTCTCTCCGCAGGCAGCGGCCGGTCT +
Preference number: 6 (lower is better)
Translates to: PTGTRQRSHRCP*PSSLSAGSGRS
Trigger: AGACCGGCCGCTGCCTGCGGAGAGAGAACTTGGCCAGGGGCACCTGTGAGATCTTTGCCTGGTGCCCGTTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000547933.1
ENST00000550772.1
ENST00000551178.5
ENST00000552050.5
ENST00000552276.5
ENST00000552723.1
CDS CCA 72 bp CGACACCACAGAGCTGGTCCATGGTGGAGCTCAAGCTaGACTGGAGCTCCCCCGATCCCACAGGCCAGGCAC +
Preference number: 6 (lower is better)
Translates to: RHHRAGPWWSSS*TGAPPIPQARH
Trigger: GTGCCTGGCCTGTGGGATCGGGGGAGCTCCAGTCCAGCTTGAGCTCCACCATGGACCAGCTCTGTGGTGTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS CCA 72 bp TCCCGGCCCAGCGGATCACGGAGCCCAGTCGGAAGATaGGGCAGTAGTGGTTCTTGGGGCCAAAGTGGCATG +
Preference number: 6 (lower is better)
Translates to: SRPSGSRSPVGR*GSSGSWGQSGM
Trigger: CATGCCACTTTGGCCCCAAGAACCACTACTGCCCCATCTTCCGACTGGGCTCCGTGATCCGCTGGGCCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552276.5
CDS CCA 72 bp TGGAGCCTCTGCCCAGGACAGTTAATTTGCTCATGCTaGGGAGGCCGTCGGGCCTCGCTGGGACAGCCTGAC +
Preference number: 6 (lower is better)
Translates to: WSLCPGQLICSC*GGRRASLGQPD
Trigger: GTCAGGCTGTCCCAGCGAGGCCCGACGGCCTCCCCAGCATGAGCAAATTAACTGTCCTGGGCAGAGGCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547933.1
CDS CCA 72 bp GGCACCCTTGTCCGACACCACAGAGCTGGTCCATGGTaGAGCTCAAGCTGGACTGGAGCTCCCCCGATCCCA +
Preference number: 6 (lower is better)
Translates to: GTLVRHHRAGPW*SSSWTGAPPIP
Trigger: TGGGATCGGGGGAGCTCCAGTCCAGCTTGAGCTCCACCATGGACCAGCTCTGTGGTGTCGGACAAGGGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS CCA 72 bp AGGGGCACCCTTGTCCGACACCACAGAGCTGGTCCATaGTGGAGCTCAAGCTGGACTGGAGCTCCCCCGATC +
Preference number: 6 (lower is better)
Translates to: RGTLVRHHRAGP*WSSSWTGAPPI
Trigger: GATCGGGGGAGCTCCAGTCCAGCTTGAGCTCCACCATGGACCAGCTCTGTGGTGTCGGACAAGGGTGCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS CCA 72 bp TCAGGAACACCCATCTGTGGGAAGGGGGCCGGTACGTaGGCATCAGCCACTCTGCTGGCTTCGGGGAGCTTC +
Preference number: 6 (lower is better)
Translates to: SGTPICGKGAGT*ASATLLASGSF
Trigger: GAAGCTCCCCGAAGCCAGCAGAGTGGCTGATGCCCACGTACCGGCCCCCTTCCCACAGATGGGTGTTCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552050.5
CDS TCA 72 bp CCTTGGGGTGGGGTAGCAGTCACAGCAACTCCTAGTTaGGGTGGAGCAGGCTCAGGGCTCCACCTGTCCCAC +
Preference number: 6 (lower is better)
Translates to: PWGGVAVTATPS*GGAGSGLHLSH
Trigger: GTGGGACAGGTGGAGCCCTGAGCCTGCTCCACCTCAACTAGGAGTTGCTGTGACTGCTACCCCACCCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552050.5
CDS CCA 72 bp AGAGGGAGTCCTCAGCCTGTGGGGCTCCAGGAGCTGTaGGCACACAGATCCGTTCCCCTTCTGACTGCTGCT +
Preference number: 6 (lower is better)
Translates to: RGSPQPVGLQEL*AHRSVPLLTAA
Trigger: AGCAGCAGTCAGAAGGGGAACGGATCTGTGTGCCCACAGCTCCTGGAGCCCCACAGGCTGAGGACTCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552276.5
CDS GCA 72 bp AACACCCATACGACCAGGTACGCCAGGATGGAGGCCTaGAGCAGCCGGTACAGCAGGCCCACCTTCTTGTTC +
Preference number: 6 (lower is better)
Translates to: NTHTTRYARMEA*SSRYSRPTFLF
Trigger: GAACAAGAAGGTGGGCCTGCTGTACCGGCTGCTGCAGGCCTCCATCCTGGCGTACCTGGTCGTATGGGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000547933.1
ENST00000551178.5
ENST00000552276.5
CDS GCA 72 bp CAAGCCTGTCACATCTGGGAAATGCCGCAGGGCCTGTaGGGGAAGAGGGAGATGCGCTTCTGGAGAAGGGGA +
Preference number: 6 (lower is better)
Translates to: QACHIWEMPQGL*GKREMRFWRRG
Trigger: TCCCCTTCTCCAGAAGCGCATCTCCCTCTTCCCGCACAGGCCCTGCGGCATTTCCCAGATGTGACAGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS GCA 72 bp TACGGAGGGAGGAACAAGCCTGTCACATCTGGGAAATaGCGCAGGGCCTGTGCGGGAAGAGGGAGATGCGCT +
Preference number: 6 (lower is better)
Translates to: YGGRNKPVTSGK*RRACAGRGRCA
Trigger: AGCGCATCTCCCTCTTCCCGCACAGGCCCTGCGGCATTTCCCAGATGTGACAGGCTTGTTCCTCCCTCCGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS CCA 72 bp TTCACTCCGTTTCCAGCTGTAACCGCTTCCCCAGCGTaGCAGTCGCTGTCCTTGGAGCACGCGCCATCAGGA +
Preference number: 6 (lower is better)
Translates to: FTPFPAVTASPA*QSLSLEHAPSG
Trigger: TCCTGATGGCGCGTGCTCCAAGGACAGCGACTGCCACGCTGGGGAAGCGGTTACAGCTGGAAACGGAGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000547933.1
ENST00000551178.5
ENST00000552050.5
ENST00000552276.5
ENST00000552723.1
CDS CCA 72 bp TTAATTCCTATCACGCCACCCTCCAGGGCTATATCCTaGAAGTCGCTCCCGGCCCAGCGGATCACGGAGCCC +
Preference number: 6 (lower is better)
Translates to: LIPITPPSRAIS*KSLPAQRITEP
Trigger: GGGCTCCGTGATCCGCTGGGCCGGGAGCGACTTCCAGGATATAGCCCTGGAGGGTGGCGTGATAGGAATTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552276.5
CDS CAA 90 bp CCGTTTCCAGCTGTAACCGCTTCCCCAGCGTGGCAGTCGCTGTCCTaGGAGCACGCGCCATCAGGAATGCCTTCATTCTCAGCACAGACG +
Preference number: 6 (lower is better)
Translates to: PFPAVTASPAWQSLS*EHAPSGMPSFSAQT
Trigger: CGTCTGTGCTGAGAATGAAGGCATTCCTGATGGCGCGTGCTCCAAGGACAGCGACTGCCACGCTGGGGAAGCGGTTACAGCTGGAAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225328.10
ENST00000547178.5
ENST00000547933.1
ENST00000552276.5
ENST00000552723.1
CDS CAA 90 bp CCGTTTCCAGCTGTAACCGCTTCCCCAGCGTGGCAGTCGCTGTCCTaGGAGCACGCGCCATCAGGAATGCCTTCATTCTGGGCTGGAATG +
Preference number: 6 (lower is better)
Translates to: PFPAVTASPAWQSLS*EHAPSGMPSFWAGM
Trigger: CATTCCAGCCCAGAATGAAGGCATTCCTGATGGCGCGTGCTCCAAGGACAGCGACTGCCACGCTGGGGAAGCGGTTACAGCTGGAAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345901.7
ENST00000551178.5
ENST00000552050.5
CDS GCA 72 bp CACCCGGACCCCATCCAATCGTTCCTTCAACACATTTaGTGGGCACCCAGCACGTGCCAGTGTCTGCACCGA +
Preference number: 6 (lower is better)
Translates to: HPDPIQSFLQHI*WAPSTCQCLHR
Trigger: TCGGTGCAGACACTGGCACGTGCTGGGTGCCCAGCAAATGTGTTGAAGGAACGATTGGATGGGGTCCGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS CCA 72 bp AGGACATTACGGAGGGAGGAACAAGCCTGTCACATCTaGGAAATGCCGCAGGGCCTGTGCGGGAAGAGGGAG +
Preference number: 6 (lower is better)
Translates to: RTLRREEQACHI*EMPQGLCGKRE
Trigger: CTCCCTCTTCCCGCACAGGCCCTGCGGCATTTCCCAGATGTGACAGGCTTGTTCCTCCCTCCGTAATGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS CCA 72 bp CGAAGTACGGAGAGGATCTGGACAAGAGAGACCTCCTaGGGACTCTCCCTCTGGTGCAGGAGACAGGCGTGT +
Preference number: 6 (lower is better)
Translates to: RSTERIWTRETS*GLSLWCRRQAC
Trigger: ACACGCCTGTCTCCTGCACCAGAGGGAGAGTCCCCAGGAGGTCTCTCTTGTCCAGATCCTCTCCGTACTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS CCA 72 bp ACGTGCCAGTGTCTGCACCGAAGTACGGAGAGGATCTaGACAAGAGAGACCTCCTGGGGACTCTCCCTCTGG +
Preference number: 6 (lower is better)
Translates to: TCQCLHRSTERI*TRETSWGLSLW
Trigger: CCAGAGGGAGAGTCCCCAGGAGGTCTCTCTTGTCCAGATCCTCTCCGTACTTCGGTGCAGACACTGGCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS CAA 90 bp CAGATCCGCTGCCCAAGATCCGAGGTGTTGGTGAAGGCCACGCCCTaGACTTTGGTGATGACAGCACTCTGCAGGGAGGTGTCGACGTCT +
Preference number: 6 (lower is better)
Translates to: QIRCPRSEVLVKATP*TLVMTALCREVSTS
Trigger: AGACGTCGACACCTCCCTGCAGAGTGCTGTCATCACCAAAGTCAAGGGCGTGGCCTTCACCAACACCTCGGATCTTGGGCAGCGGATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000547933.1
ENST00000551178.5
ENST00000552050.5
ENST00000552276.5
ENST00000552723.1
CDS GCA 72 bp TCGTTCCTTCAACACATTTGCTGGGCACCCAGCACGTaGCAGTGTCTGCACCGAAGTACGGAGAGGATCTGG +
Preference number: 6 (lower is better)
Translates to: SFLQHICWAPST*QCLHRSTERIW
Trigger: CCAGATCCTCTCCGTACTTCGGTGCAGACACTGGCACGTGCTGGGTGCCCAGCAAATGTGTTGAAGGAACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS CCA 72 bp AGGAGAAGTTCATTACCTGTGGGGCTCCAGGAGCTGTaGGCACACAGATCCGTTCCCCTTCTGACTGCTGCT +
Preference number: 6 (lower is better)
Translates to: RRSSLPVGLQEL*AHRSVPLLTAA
Trigger: AGCAGCAGTCAGAAGGGGAACGGATCTGTGTGCCCACAGCTCCTGGAGCCCCACAGGTAATGAACTTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS GCA 72 bp GTAGGCTTTCATCAGGGTGCGGAACTCCACCCCGGCTaGGTCTCGGTAATATCTGGCAAATCTGAAGTTGTA +
Preference number: 6 (lower is better)
Translates to: VGFHQGAELHPG*VSVISGKSEVV
Trigger: TACAACTTCAGATTTGCCAGATATTACCGAGACGCAGCCGGGGTGGAGTTCCGCACCCTGATGAAAGCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000550772.1
ENST00000551178.5
ENST00000552050.5
ENST00000552276.5
ENST00000552723.1
CDS CAA 90 bp CTTGACTTTGGTGATGACAGCACTCTGCAGGGAGGTGTCGACGTCTaGGTAACCCTTCTTTATCAGGAACACCCATACGACCAGGTACGC +
Preference number: 6 (lower is better)
Translates to: LDFGDDSTLQGGVDV*VTLLYQEHPYDQVR
Trigger: GCGTACCTGGTCGTATGGGTGTTCCTGATAAAGAAGGGTTACCAAGACGTCGACACCTCCCTGCAGAGTGCTGTCATCACCAAAGTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000547933.1
ENST00000551178.5
ENST00000552276.5
CDS TCA 72 bp AGAATGTTTCCGAGGCATTGGTCCTCATCCTTTAGGTaGGGCGGAGGCACCACAGCCCGAATTTTGGCATTT +
Preference number: 6 (lower is better)
Translates to: RMFPRHWSSSFR*GGGTTARILAF
Trigger: AAATGCCAAAATTCGGGCTGTGGTGCCTCCGCCTCACCTAAAGGATGAGGACCAATGCCTCGGAAACATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS CCA 72 bp GAAACGTACTTCATGTCCATTTTTGACAGGGGAGACTaGGTCTTAAGCGCCAGCGTCAGGAGAAGTTCATTA +
Preference number: 6 (lower is better)
Translates to: ETYFMSIFDRGD*VLSASVRRSSL
Trigger: TAATGAACTTCTCCTGACGCTGGCGCTTAAGACCCAGTCTCCCCTGTCAAAAATGGACATGAAGTACGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549063.1
CDS TCA 72 bp GGCAAATCTGAAGTTGTACCCGGAGGAGACAGACTTTaGAAGTTTATTGTCCAGACGGTTGGAGAAGTTGAA +
Preference number: 6 (lower is better)
Translates to: GKSEVVPGGDRL*KFIVQTVGEVE
Trigger: TTCAACTTCTCCAACCGTCTGGACAATAAACTTTCAAAGTCTGTCTCCTCCGGGTACAACTTCAGATTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550772.1
ENST00000552723.1
CDS CAA 72 bp GGGCCAAAGTGGCATGATTTCAGGAAAGATCTGTCCTaGACGTCCATCACATTGCTTTTGGAGAAGTTGAAT +
Preference number: 6 (lower is better)
Translates to: GPKWHDFRKDLS*TSITLLLEKLN
Trigger: ATTCAACTTCTCCAAAAGCAATGTGATGGACGTCAAGGACAGATCTTTCCTGAAATCATGCCACTTTGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000552050.5
CDS TCA 72 bp GGCAAATCTGAAGTTGTACCCGGAGGAGACAGACTTTaGAAGTTTATTGTCCAGACGGCTAAAAGAATAGTG +
Preference number: 6 (lower is better)
Translates to: GKSEVVPGGDRL*KFIVQTAKRIV
Trigger: CACTATTCTTTTAGCCGTCTGGACAATAAACTTTCAAAGTCTGTCTCCTCCGGGTACAACTTCAGATTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225328.10
ENST00000345901.7
ENST00000547178.5
ENST00000551178.5
ENST00000552050.5
ENST00000552276.5