RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for P2RX3 (Homo sapiens)

Ensembl gene IDs: ENSG00000109991

Ensembl transcript IDs: ENST00000263314.3, ENST00000533436.1, ENST00000534820.1, ENST00000616487.4

Found 294 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACGTCCCCTACCCGCAAGATGGGGCAGAAAGGGTCCTTGTCCGGGTaGAAGCGGCAGGTCTTCATGTCCCTGGCTGTCAGGTTGGGAAGG +
Preference number: 1 (lower is better)
Translates to: TSPTRKMGQKGSLSG*KRQVFMSLAVRLGR
Trigger: CCTTCCCAACCTGACAGCCAGGGACATGAAGACCTGCCGCTTCCACCCGGACAAGGACCCTTTCTGCCCCATCTTGCGGGTAGGGGACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534820.1
3UTR GCA 90 bp GAGCCTCCTGAACTACTCCTGAAGCTGTCCCTTCCCCACTTCCTGTaGCGTGTGTTGAGGGGCCGCCCTCCATCTACAGTTGAGCTGGTG +
Preference number: 1 (lower is better)
Translates to: EPPELLLKLSLPHFL*RVLRGRPPSTVELV
Trigger: CACCAGCTCAACTGTAGATGGAGGGCGGCCCCTCAACACACGGCACAGGAAGTGGGGAAGGGACAGCTTCAGGAGTAGTTCAGGAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR TCA 90 bp GGCACCTTATTAAGACCCTATGGGGACAGGCCTGGCCAACCCAGCTaGGCAGCTCACAAGGCACCAGGCCTTACTGGAGCATTTTCACTG +
Preference number: 1 (lower is better)
Translates to: GTLLRPYGDRPGQPS*AAHKAPGLTGAFSL
Trigger: CAGTGAAAATGCTCCAGTAAGGCCTGGTGCCTTGTGAGCTGCTCAGCTGGGTTGGCCAGGCCTGTCCCCATAGGGTCTTAATAAGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR TCA 90 bp GATGCCTGGGGGAGTCCCAGGTGGAGAATGTGGTGCTGCCTTCACTaGTGTCTCTGCTGGAGAAGCATAGTCTGGTCAGATCTCCAGGCA +
Preference number: 1 (lower is better)
Translates to: DAWGSPRWRMWCCLH*CLCWRSIVWSDLQA
Trigger: TGCCTGGAGATCTGACCAGACTATGCTTCTCCAGCAGAGACATCAGTGAAGGCAGCACCACATTCTCCACCTGGGACTCCCCCAGGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR CCA 90 bp GCAGGGCTGATGGACCCTGGGAGTTCATTCTTCTCTCATGGGGTGTaGGCGATGGAGTTAGTCAGACGGACGTTCAAATCCCAGCTCTCT +
Preference number: 1 (lower is better)
Translates to: AGLMDPGSSFFSHGV*AMELVRRTFKSQLS
Trigger: AGAGAGCTGGGATTTGAACGTCCGTCTGACTAACTCCATCGCCCACACCCCATGAGAGAAGAATGAACTCCCAGGGTCCATCAGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR CCA 90 bp CACTGTAGGAGAGGACAGAAAGGGGATAGAGGATGTCTGGGTCAATaGATCCAGCTTCCTGTTCTTGCCTCCTTCCCTGAAGGGCCAGGA +
Preference number: 1 (lower is better)
Translates to: HCRRGQKGDRGCLGQ*IQLPVLASFPEGPG
Trigger: TCCTGGCCCTTCAGGGAAGGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTCTATCCCCTTTCTGTCCTCTCCTACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR CCA 90 bp GGGCCTCTCACTGTAGGAGAGGACAGAAAGGGGATAGAGGATGTCTaGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCTTCCCTGAAG +
Preference number: 1 (lower is better)
Translates to: GPLTVGEDRKGIEDV*VNGSSFLFLPPSLK
Trigger: CTTCAGGGAAGGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTCTATCCCCTTTCTGTCCTCTCCTACAGTGAGAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR CCA 90 bp GGTGGGGTGGAGGTGGTGACAAATGATTTCCTCCCATCCTCCAGGTaGGAGACGGAGGCAGGGAGAACGGAAAGTGACATGTCATATACT +
Preference number: 1 (lower is better)
Translates to: GGVEVVTNDFLPSSR*ETEAGRTESDMSYT
Trigger: AGTATATGACATGTCACTTTCCGTTCTCCCTGCCTCCGTCTCCCACCTGGAGGATGGGAGGAAATCATTTGTCACCACCTCCACCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534820.1
3UTR TCA 90 bp ATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCTTCCCTaGAGGGCCAGGACATGTGGGTTCCTTTTTGGCCATGAACTGTGG +
Preference number: 1 (lower is better)
Translates to: MSGSMDPASCSCLLP*RARTCGFLFGHELW
Trigger: CCACAGTTCATGGCCAAAAAGGAACCCACATGTCCTGGCCCTTCAGGGAAGGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR TCA 90 bp ACAAGGCACCAGGCCTTACTGGAGCATTTTCACTGTTGTTGTAAATaGGGACTGCTGAACTCCTGGAACAGGGTCCCAGCCTACGACAGG +
Preference number: 1 (lower is better)
Translates to: TRHQALLEHFHCCCK*GLLNSWNRVPAYDR
Trigger: CCTGTCGTAGGCTGGGACCCTGTTCCAGGAGTTCAGCAGTCCTCATTTACAACAACAGTGAAAATGCTCCAGTAAGGCCTGGTGCCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR CCA 90 bp GTCAGACGGACGTTCAAATCCCAGCTCTCTCACATCCTGGCTATCTaGCCTGGGGCAAATGACTCAGTCTCTCTGAGCCTTGGTTTATCT +
Preference number: 1 (lower is better)
Translates to: VRRTFKSQLSHILAI*PGANDSVSLSLGLS
Trigger: AGATAAACCAAGGCTCAGAGAGACTGAGTCATTTGCCCCAGGCCAGATAGCCAGGATGTGAGAGAGCTGGGATTTGAACGTCCGTCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR GCA 90 bp TTAACCCTACATCTAGCACACAGAAGTGGTAACTTAGTTCAGATATaGGGAGGACAACCTCAGGCTCACACACACTTGCTGGCCGGCTCC +
Preference number: 1 (lower is better)
Translates to: LTLHLAHRSGNLVQI*GGQPQAHTHLLAGS
Trigger: GGAGCCGGCCAGCAAGTGTGTGTGAGCCTGAGGTTGTCCTCCGCATATCTGAACTAAGTTACCACTTCTGTGTGCTAGATGTAGGGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR TCA 90 bp GCAGAAAGGGTCCTTGTCCGGGTGGAAGCGGCAGGTCTTCATGTCCCTGGCTGTTGGGCAAAGGGGAGCTaGGGTGGGGGCCTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: AERVLVRVEAAGLHVPGCWAKGS*GGGLSP
Trigger: AGGAGACAGGCCCCCACCTCAGCTCCCCTTTGCCCA...ACAGCCAGGGACATGAAGACCTGCCGCTTCCACCCGGACAAGGACCCTTTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534820.1
3UTR CAA 90 bp AACTTGACCACGTCCCCTACCCGCAAGATGGGGCAGAAAGGGTCCTaGTCCGGGTGGAAGCGGCAGGTCTTCATGTCCCTGGCTGTCAGG +
Preference number: 2 (lower is better)
Translates to: NLTTSPTRKMGQKGS*SGWKRQVFMSLAVR
Trigger: CCTGACAGCCAGGGACATGAAGACCTGCCGCTTCCACCCGGACAAGGACCCTTTCTGCCCCATCTTGCGGGTAGGGGACGTGGTCAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534820.1
3UTR-3UTR CCA 90 bp CAGATATGCGGAGGACAACCTCAGGCTCACACACACTTGCTGGCCGGCTCCAGAAGGCAGGGTCCTCTGTaGGGAGGCCTGGAGCCTTTG +
Preference number: 2 (lower is better)
Translates to: QICGGQPQAHTHLLAGSRRQGPL*GGLEPL
Trigger: CAAAGGCTCCAGGCCTCCCCACAGAGGACCCTGCCT...TCTGGAGCCGGCCAGCAAGTGTGTGTGAGCCTGAGGTTGTCCTCCGCATATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CCA 90 bp AGTCTGGTCAGATCTCCAGGCACTGCCCAATTCCCAAGGCTGACCCTGGGGAGACTATGGGGACAGGCCTaGCCAACCCAGCTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: SLVRSPGTAQFPRLTLGRLWGQA*PTQLSS
Trigger: GCTGCTCAGCTGGGTTGGCCAGGCCTGTCCCCATAG...TCTCCCCAGGGTCAGCCTTGGGAATTGGGCAGTGCCTGGAGATCTGACCAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR GCA 90 bp CAGATATGCGGAGGACAACCTCAGGCTCACACACACTTGCTGGCCGGCTCCAGACACAAAACCTGGTTCTaGCCCAGAGCCCTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: QICGGQPQAHTHLLAGSRHKTWF*PRALPW
Trigger: CCAGGGCAGGGCTCTGGGGCAGAACCAGGTTTTGTG...TCTGGAGCCGGCCAGCAAGTGTGTGTGAGCCTGAGGTTGTCCTCCGCATATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR CAA 90 bp AACTTAGTTCAGATATGCGGAGGACAACCTCAGGCTCACACACACTaGCTGGCCGGCTCCAGAGGGGCGGAGGCACCTACAGGAGGACCA +
Preference number: 2 (lower is better)
Translates to: NLVQICGGQPQAHTH*LAGSRGAEAPTGGP
Trigger: TGGTCCTCCTGTAGGTGCCTCCGCCCCTCTGGAGCCGGCCAGCAAGTGTGTGTGAGCCTGAGGTTGTCCTCCGCATATCTGAACTAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR TCA 90 bp GCAGAAAGGGTCCTTGTCCGGGTGGAAGCGGCAGGTCTTCATGTCCCTGGCTGTTCTCAGCTTCCATCATaGTGGGCCCTCCTCAAGCTC +
Preference number: 2 (lower is better)
Translates to: AERVLVRVEAAGLHVPGCSQLPS*WALLKL
Trigger: GAGCTTGAGGAGGGCCCATCATGATGGAAGCTGAGA...ACAGCCAGGGACATGAAGACCTGCCGCTTCCACCCGGACAAGGACCCTTTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534820.1
3UTR CAA 90 bp GAACTACTCCTGAAGCTGTCCCTTCCCCACTTCCTGTGCCGTGTGTaGAGGGGCCGCCCTCCATCTACAGTTGAGCTGGTGCAGCTAAGA +
Preference number: 2 (lower is better)
Translates to: ELLLKLSLPHFLCRV*RGRPPSTVELVQLR
Trigger: TCTTAGCTGCACCAGCTCAACTGTAGATGGAGGGCGGCCCCTCAACACACGGCACAGGAAGTGGGGAAGGGACAGCTTCAGGAGTAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR TCA 90 bp CACTGTAGGAGAGGACAGAAAGGGGATAGAGGATGTCTGGGTCAATGGATCCAGCAGGGTGGAGGCGGCTaGAGCAGCAGGGCTGATGGA +
Preference number: 2 (lower is better)
Translates to: HCRRGQKGDRGCLGQWIQQGGGG*SSRADG
Trigger: TCCATCAGCCCTGCTGCTTCAGCCGCCTCCACCCTG...CTGGATCCATTGACCCAGACATCCTCTATCCCCTTTCTGTCCTCTCCTACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CCA 90 bp ATTAGCCGGGCTTGGTCCCAGCTACTCCGGAAGCTGAGGCAGGAGAATGGCGTGAGGTCTTCATGTCCCTaGCTGTCAGGTTGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: ISRAWSQLLRKLRQENGVRSSCP*LSGWEG
Trigger: TCCTTCCCAACCTGACAGCCAGGGACATGAAGACCT...CACGCCATTCTCCTGCCTCAGCTTCCGGAGTAGCTGGGACCAAGCCCGGCTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534820.1
3UTR-3UTR GCA 90 bp TCATTGGGCAAGGCCTTTGCAAGTACCCACCATTTGAGCCTCCTGAACTACTCCTGGCTCAGGTGCTCCTaGCCCAGGGGTCCTAGGAAG +
Preference number: 2 (lower is better)
Translates to: SLGKAFASTHHLSLLNYSWLRCS*PRGPRK
Trigger: CTTCCTAGGACCCCTGGGGCAGGAGCACCTGAGCCA...GGAGTAGTTCAGGAGGCTCAAATGGTGGGTACTTGCAAAGGCCTTGCCCAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR GCA 90 bp CCAAAAATTAGCCGGGCTTGGTCCCAGCTACTCCGGAAGCTGAGGCAGGAGAATGCCGAAATCGCGCCATaGACTCTAGCCTGGGAGACA +
Preference number: 2 (lower is better)
Translates to: PKISRAWSQLLRKLRQENAEIAP*TLAWET
Trigger: TGTCTCCCAGGCTAGAGTGCATGGCGCGATTTCGGC...ATTCTCCTGCCTCAGCTTCCGGAGTAGCTGGGACCAAGCCCGGCTAATTTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534820.1
3UTR-3UTR CCA 90 bp CCAAAAATTAGCCGGGCTTGGTCCCAGCTACTCCGGAAGCTGAGGCAGGAGAATTCGTGCGCGCCAGTTTaGCAAAATCCTGCCCCGCAA +
Preference number: 2 (lower is better)
Translates to: PKISRAWSQLLRKLRQENSCAPV*QNPAPQ
Trigger: TTGCGGGGCAGGATTTTGCCAAACTGGCGCGCACGA...ATTCTCCTGCCTCAGCTTCCGGAGTAGCTGGGACCAAGCCCGGCTAATTTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534820.1
3UTR-3UTR GCA 90 bp CTTCTAAATTTGGGATGCACCCAAGTCAGAGATGGGGTCCCTCACCACTGTCTACCCTCCCATGCCCCTTaGTCAGGCAGGGTCCTCTGT +
Preference number: 2 (lower is better)
Translates to: LLNLGCTQVRDGVPHHCLPSHAP*SGRVLC
Trigger: ACAGAGGACCCTGCCTGAGCAAGGGGCATGGGAGGG...TAGACAGTGGTGAGGGACCCCATCTCTGACTTGGGTGCATCCCAAATTTAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CCA 90 bp GTCCTACATTATAATCTCTACTCTTTGGGAAGGGGATGGCTCAGGTGCTCCTGCGCACTGCCTGTCTGCTaGAGCAGTCGGAGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: VLHYNLYSLGRGWLRCSCALPVC*SSRRPR
Trigger: TCTGGGCCTCCGACTGCTCCAGCAGACAGGCAGTGC...GCAGGAGCACCTGAGCCATCCCCTTCCCAAAGAGTAGAGATTATAATGTAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CCA 90 bp AGTCTGGTCAGATCTCCAGGCACTGCCCAATTCCCAAGGCTGACCCTGGGGAGAAGGGCTGATGGACCCTaGGAGTTCATTCTTCTCTCA +
Preference number: 2 (lower is better)
Translates to: SLVRSPGTAQFPRLTLGRRADGP*EFILLS
Trigger: TGAGAGAAGAATGAACTCCCAGGGTCCATCAGCCCT...TCTCCCCAGGGTCAGCCTTGGGAATTGGGCAGTGCCTGGAGATCTGACCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CCA 90 bp TCATTGGGCAAGGCCTTTGCAAGTACCCACCATTTGAGCCTCCTGAACTACTCCGGGCCCAGATGTGTGTaGGTGTGGGGTCCCAGAGAA +
Preference number: 2 (lower is better)
Translates to: SLGKAFASTHHLSLLNYSGPRCV*VWGPRE
Trigger: TTCTCTGGGACCCCACACCCACACACATCTGGGCCC...GGAGTAGTTCAGGAGGCTCAAATGGTGGGTACTTGCAAAGGCCTTGCCCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR GCA 90 bp GACCTCATGATCATGCCCACTCTGACTGCCAGATGCAGATTTATCATGAAGCTAGGAGCACTGCCTGTCTaGTGGAGCAGTCGGAGGCCC +
Preference number: 2 (lower is better)
Translates to: DLMIMPTLTARCRFIMKLGALPV*WSSRRP
Trigger: GGGCCTCCGACTGCTCCAGCAGACAGGCAGTGCTCC...TAGCTTCATGATAAATCTGCATCTGGCAGTCAGAGTGGGCATGATCATGAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR TCA 90 bp AAAGGGGATAGAGGATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCAATGAGCAGCAGAAATaGGAGCCCCTCTTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: KGDRGCLGQWIQLPVLASNEQQK*EPLFPP
Trigger: GGGAGGGAAGAGGGGCTCTCATTTCTGCTGCTCATT...GGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTCTATCCCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR TCA 90 bp TGTAAAGTGGGGGTTGAGTTAGACAATCCCTGTCACTCATTTGGTCCATTGCCTTCCTGTGCCGTGTGTTaGGGGGCCGCCCTCCATCTA +
Preference number: 2 (lower is better)
Translates to: CKVGVELDNPCHSFGPLPSCAVC*GAALHL
Trigger: TAGATGGAGGGCGGCCCCTCAACACACGGCACAGGA...AGGCAATGGACCAAATGAGTGACAGGGATTGTCTAACTCAACCCCCACTTTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR GCA 90 bp TGTAAAGTGGGGGTTGAGTTAGACAATCCCTGTCACTCATTTGGTCCATTGCCTTCTGCCCCAGAGCCCTaGCCTGGGGCAATTTCTGGG +
Preference number: 2 (lower is better)
Translates to: CKVGVELDNPCHSFGPLPSAPEP*PGAISG
Trigger: CCCAGAAATTGCCCCAGGGCAGGGCTCTGGGGCAGA...AGGCAATGGACCAAATGAGTGACAGGGATTGTCTAACTCAACCCCCACTTTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR GCA 90 bp CAGATATGCGGAGGACAACCTCAGGCTCACACACACTTGCTGGCCGGCTCCAGACATGCCCACTCTGACTaGCAGATGCAGATTTATCAT +
Preference number: 2 (lower is better)
Translates to: QICGGQPQAHTHLLAGSRHAHSD*QMQIYH
Trigger: ATGATAAATCTGCATCTGGCAGTCAGAGTGGGCATG...TCTGGAGCCGGCCAGCAAGTGTGTGTGAGCCTGAGGTTGTCCTCCGCATATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR GCA 90 bp CCAAAAATTAGCCGGGCTTGGTCCCAGCTACTCCGGAAGCTGAGGCAGGAGAATAGTTTGGCAAAATCCTaGCCCGCAAACTTGACCACG +
Preference number: 2 (lower is better)
Translates to: PKISRAWSQLLRKLRQENSLAKS*PANLTT
Trigger: CGTGGTCAAGTTTGCGGGGCAGGATTTTGCCAAACT...ATTCTCCTGCCTCAGCTTCCGGAGTAGCTGGGACCAAGCCCGGCTAATTTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534820.1
3UTR CAA 90 bp GTTCTTGCCTCCTTCCCTGAAGGGCCAGGACATGTGGGTTCCTTTTaGGCCATGAACTGTGGCACTGAACCAGTCATTTTCCCTTTCTGG +
Preference number: 2 (lower is better)
Translates to: VLASFPEGPGHVGSF*AMNCGTEPVIFPFW
Trigger: CCAGAAAGGGAAAATGACTGGTTCAGTGCCACAGTTCATGGCCAAAAAGGAACCCACATGTCCTGGCCCTTCAGGGAAGGAGGCAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR GCA 90 bp AAAGGGGATAGAGGATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCCTTGGGTCCCAGCTATaGTCATGGAATGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: KGDRGCLGQWIQLPVLASLGSQL*SWNEQQ
Trigger: CTGCTGCTCATTCCATGAGCATAGCTGGGACCCAAG...GGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTCTATCCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR GCA 90 bp GACCTCATGATCATGCCCACTCTGACTGCCAGATGCAGATTTATCATGAAGCTACTCAGCAGGGAGCACTaGCTGTCTGCTGGAGCAGTC +
Preference number: 2 (lower is better)
Translates to: DLMIMPTLTARCRFIMKLLSREH*LSAGAV
Trigger: GACTGCTCCAGCAGACAGGCAGTGCTCCCTGCTGAG...TAGCTTCATGATAAATCTGCATCTGGCAGTCAGAGTGGGCATGATCATGAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CCA 90 bp CACTGTAGGAGAGGACAGAAAGGGGATAGAGGATGTCTGGGTCAATGGATCCAGGTGTGTGAAAGTGCCTaGCACTTGGTAGGCCCTTGT +
Preference number: 2 (lower is better)
Translates to: HCRRGQKGDRGCLGQWIQVCESA*HLVGPC
Trigger: ACAAGGGCCTACCAAGTGCCAGGCACTTTCACACAC...CTGGATCCATTGACCCAGACATCCTCTATCCCCTTTCTGTCCTCTCCTACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CCA 90 bp TGTAAAGTGGGGGTTGAGTTAGACAATCCCTGTCACTCATTTGGTCCATTGCCTGGACTGCTGAACTCCTaGAACAGGGTCCCAGCCTAC +
Preference number: 2 (lower is better)
Translates to: CKVGVELDNPCHSFGPLPGLLNS*NRVPAY
Trigger: GTAGGCTGGGACCCTGTTCCAGGAGTTCAGCAGTCC...AGGCAATGGACCAAATGAGTGACAGGGATTGTCTAACTCAACCCCCACTTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CCA 90 bp CAGGGAGAACGGAAAGTGACATGTCATATACTGCTCAGTAAAGAAGTGCTGTGGCCCCTACCCGCAAGATaGGGCAGAAAGGGTCCTTGT +
Preference number: 2 (lower is better)
Translates to: QGERKVTCHILLSKEVLWPLPAR*GRKGPC
Trigger: ACAAGGACCCTTTCTGCCCCATCTTGCGGGTAGGGG...CCACAGCACTTCTTTACTGAGCAGTATATGACATGTCACTTTCCGTTCTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534820.1
3UTR-3UTR TCA 90 bp ACAATCCCTGTCACTCATTTGGTCCATTGCCTGCCAATAGTAAGTAATCAGTGTTCTTGCCTCCTTCCCTaGAGGGCCAGGACATGTGGG +
Preference number: 2 (lower is better)
Translates to: TIPVTHLVHCLPIVSNQCSCLLP*RARTCG
Trigger: CCCACATGTCCTGGCCCTTCAGGGAAGGAGGCAAGA...ACACTGATTACTTACTATTGGCAGGCAATGGACCAAATGAGTGACAGGGATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CCA 90 bp GAGGATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCTTCCCTGAAGATAATCTCTACTCTTTaGGAAGGGGATGGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: EDVWVNGSSFLFLPPSLKIISTL*EGDGSG
Trigger: ACCTGAGCCATCCCCTTCCCAAAGAGTAGAGATTAT...CTTCAGGGAAGGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR TCA 90 bp CTTTCTAAAGAGATGCCCCCAAATTGTATATGCTTAGGATTCACAAAACCTGGTCCTGGCCAACCCAGCTaGGCAGCTCACAAGGCACCA +
Preference number: 2 (lower is better)
Translates to: LSKEMPPNCICLGFTKPGPGQPS*AAHKAP
Trigger: TGGTGCCTTGTGAGCTGCTCAGCTGGGTTGGCCAGG...ACCAGGTTTTGTGAATCCTAAGCATATACAATTTGGGGGCATCTCTTTAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR TCA 90 bp TCATTGGGCAAGGCCTTTGCAAGTACCCACCATTTGAGCCTCCTGAACTACTCCCATGAACTGTGGCACTaGACCAGTCATTTTCCCTTT +
Preference number: 2 (lower is better)
Translates to: SLGKAFASTHHLSLLNYSHELWH*TSHFPF
Trigger: AAAGGGAAAATGACTGGTTCAGTGCCACAGTTCATG...GGAGTAGTTCAGGAGGCTCAAATGGTGGGTACTTGCAAAGGCCTTGCCCAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR GCA 90 bp AAAGGGGATAGAGGATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCTTTCTGGCCTCAGTTTaGTCATCTGTAAGCAAGAGG +
Preference number: 2 (lower is better)
Translates to: KGDRGCLGQWIQLPVLASFLASV*SSVSKR
Trigger: CCTCTTGCTTACAGATGAGCAAACTGAGGCCAGAAA...GGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTCTATCCCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR GCA 90 bp CAGATATGCGGAGGACAACCTCAGGCTCACACACACTTGCTGGCCGGCTCCAGATTCTTTCTAAAGAGATaGCCCCAAATTGTATATGCT +
Preference number: 2 (lower is better)
Translates to: QICGGQPQAHTHLLAGSRFFLKR*PQIVYA
Trigger: AGCATATACAATTTGGGGGCATCTCTTTAGAAAGAA...TCTGGAGCCGGCCAGCAAGTGTGTGTGAGCCTGAGGTTGTCCTCCGCATATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR GCA 90 bp TGTAAAGTGGGGGTTGAGTTAGACAATCCCTGTCACTCATTTGGTCCATTGCCTCCTTCAGGACACCACTaGCTCCATCTCCCCATTAGA +
Preference number: 2 (lower is better)
Translates to: CKVGVELDNPCHSFGPLPPSGHH*LHLPIR
Trigger: TCTAATGGGGAGATGGAGGCAGTGGTGTCCTGAAGG...AGGCAATGGACCAAATGAGTGACAGGGATTGTCTAACTCAACCCCCACTTTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CCA 90 bp CTTTCTAAAGAGATGCCCCCAAATTGTATATGCTTAGGATTCACAAAACCTGGTCCCAGAGCCCTGCCCTaGGGCAATTTCTGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: LSKEMPPNCICLGFTKPGPRALP*GNFWAS
Trigger: AGAGGCCCAGAAATTGCCCCAGGGCAGGGCTCTGGG...ACCAGGTTTTGTGAATCCTAAGCATATACAATTTGGGGGCATCTCTTTAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CCA 90 bp TGTAAAGTGGGGGTTGAGTTAGACAATCCCTGTCACTCATTTGGTCCATTGCCTAGGATTCACAAAACCTaGTTCTGCCCCAGAGCCCTG +
Preference number: 2 (lower is better)
Translates to: CKVGVELDNPCHSFGPLPRIHKT*FCPRAL
Trigger: CAGGGCTCTGGGGCAGAACCAGGTTTTGTGAATCCT...AGGCAATGGACCAAATGAGTGACAGGGATTGTCTAACTCAACCCCCACTTTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR TCA 90 bp CACTGTAGGAGAGGACAGAAAGGGGATAGAGGATGTCTGGGTCAATGGATCCAGATGACTCAGTCTCTCTaGGCCTTGGTTTATCTTCAA +
Preference number: 2 (lower is better)
Translates to: HCRRGQKGDRGCLGQWIQMTQSL*ALVYLQ
Trigger: TTGAAGATAAACCAAGGCTCAGAGAGACTGAGTCAT...CTGGATCCATTGACCCAGACATCCTCTATCCCCTTTCTGTCCTCTCCTACAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR TCA 90 bp GGAGAACGGAAAGTGACATGTCATATACTGCTCAGTAAAGAAGTGCTGTGGTGGTTCCCTTCTCAAAGTTaGAGAGGGGGAAACGGATGC +
Preference number: 2 (lower is better)
Translates to: GERKVTCHILLSKEVLWWFPSQS*RGGNGC
Trigger: GCATCCGTTTCCCCCTCTTCAACTTTGAGAAGGGAA...CCACCACAGCACTTCTTTACTGAGCAGTATATGACATGTCACTTTCCGTTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534820.1
3UTR-3UTR CCA 90 bp TGTAAAGTGGGGGTTGAGTTAGACAATCCCTGTCACTCATTTGGTCCATTGCCTTTCTCTCATGGGGTGTaGGCGATGGAGTTAGTCAGA +
Preference number: 2 (lower is better)
Translates to: CKVGVELDNPCHSFGPLPFSHGV*AMELVR
Trigger: TCTGACTAACTCCATCGCCCACACCCCATGAGAGAA...AGGCAATGGACCAAATGAGTGACAGGGATTGTCTAACTCAACCCCCACTTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CCA 90 bp AGAGATGCCCCCAAATTGTATATGCTTAGGATTCACAAAACCTGGTTCTGCCCCAGATGTGTGTGGGTGTaGGGTCCCAGAGAAGAACAA +
Preference number: 2 (lower is better)
Translates to: RDAPKLYMLRIHKTWFCPRCVWV*GPREEQ
Trigger: TTGTTCTTCTCTGGGACCCCACACCCACACACATCT...GGGGCAGAACCAGGTTTTGTGAATCCTAAGCATATACAATTTGGGGGCATCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR TCA 90 bp TGTAAAGTGGGGGTTGAGTTAGACAATCCCTGTCACTCATTTGGTCCATTGCCTCACTGTTGTTGTAAATaGGGACTGCTGAACTCCTGG +
Preference number: 2 (lower is better)
Translates to: CKVGVELDNPCHSFGPLPHCCCK*GLLNSW
Trigger: CCAGGAGTTCAGCAGTCCTCATTTACAACAACAGTG...AGGCAATGGACCAAATGAGTGACAGGGATTGTCTAACTCAACCCCCACTTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR TCA 90 bp TTCTTTTTCTATCAAATAGGATTAATGACAAACCATAGCGGACTCACCAGCGTTCAGCCTCCCAAGAGCTaGATTCCCCAGGGATGCCTG +
Preference number: 2 (lower is better)
Translates to: FFFYQIGLMTNHSGLTSVQPPKS*IPQGCL
Trigger: CAGGCATCCCTGGGGAATTCAGCTCTTGGGAGGCTG...AACGCTGGTGAGTCCGCTATGGTTTGTCATTAATCCTATTTGATAGAAAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR GCA 90 bp GACCTCATGATCATGCCCACTCTGACTGCCAGATGCAGATTTATCATGAAGCTAAAATGCAAACTTTGTTaGTGGGAAAGGCATGGGGCT +
Preference number: 2 (lower is better)
Translates to: DLMIMPTLTARCRFIMKLKCKLC*WERHGA
Trigger: AGCCCCATGCCTTTCCCAGCAACAAAGTTTGCATTT...TAGCTTCATGATAAATCTGCATCTGGCAGTCAGAGTGGGCATGATCATGAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CCA 90 bp TTCTTTTTCTATCAAATAGGATTAATGACAAACCATAGCGGACTCACCAGCGTTGTCCTAGGAAGCAGATaGGGCCAGGCAAGGAGTGAA +
Preference number: 2 (lower is better)
Translates to: FFFYQIGLMTNHSGLTSVVLGSR*GQARSE
Trigger: TTCACTCCTTGCCTGGCCCCATCTGCTTCCTAGGAC...AACGCTGGTGAGTCCGCTATGGTTTGTCATTAATCCTATTTGATAGAAAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CCA 90 bp ACAATCCCTGTCACTCATTTGGTCCATTGCCTGCCAATAGTAAGTAATCAGTGTCTTGGTAGGCCCTTGTaGCCATCTGTCCTACATTAT +
Preference number: 2 (lower is better)
Translates to: TIPVTHLVHCLPIVSNQCLGRPL*PSVLHY
Trigger: ATAATGTAGGACAGATGGCCACAAGGGCCTACCAAG...ACACTGATTACTTACTATTGGCAGGCAATGGACCAAATGAGTGACAGGGATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CCA 90 bp TTCTTTTTCTATCAAATAGGATTAATGACAAACCATAGCGGACTCACCAGCGTTAGGACCACCTCCATCTaGGTAAAAGGGAGGGGTTGG +
Preference number: 2 (lower is better)
Translates to: FFFYQIGLMTNHSGLTSVRTTSI*VKGRGW
Trigger: CCAACCCCTCCCTTTTACCCAGATGGAGGTGGTCCT...AACGCTGGTGAGTCCGCTATGGTTTGTCATTAATCCTATTTGATAGAAAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR GCA 90 bp ACAATCCCTGTCACTCATTTGGTCCATTGCCTGCCAATAGTAAGTAATCAGTGTCTTCTAAATTTGGGATaGACCCAAGTCAGAGATGGG +
Preference number: 2 (lower is better)
Translates to: TIPVTHLVHCLPIVSNQCLLNLG*TQVRDG
Trigger: CCCATCTCTGACTTGGGTGCATCCCAAATTTAGAAG...ACACTGATTACTTACTATTGGCAGGCAATGGACCAAATGAGTGACAGGGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CCA 90 bp CTTTCTAAAGAGATGCCCCCAAATTGTATATGCTTAGGATTCACAAAACCTGGTGGATGTCTGGGTCAATaGATCCAGCTTCCTGTTCTT +
Preference number: 2 (lower is better)
Translates to: LSKEMPPNCICLGFTKPGGCLGQ*IQLPVL
Trigger: AAGAACAGGAAGCTGGATCCATTGACCCAGACATCC...ACCAGGTTTTGTGAATCCTAAGCATATACAATTTGGGGGCATCTCTTTAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR GCA 72 bp GTGAGATTGGGGTCTCAGCAGGGAGCACTGCCTGTCTaGTGGAGCAGTCGGAGGCCCAGACACTTGGGTCCC +
Preference number: 3 (lower is better)
Translates to: VRLGSQQGALPV*WSSRRPRHLGP
Trigger: GGGACCCAAGTGTCTGGGCCTCCGACTGCTCCAGCAGACAGGCAGTGCTCCCTGCTGAGACCCCAATCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR CCA 72 bp AGATTGGGGTCTCAGCAGGGAGCACTGCCTGTCTGCTaGAGCAGTCGGAGGCCCAGACACTTGGGTCCCAGC +
Preference number: 3 (lower is better)
Translates to: RLGSQQGALPVC*SSRRPRHLGPS
Trigger: GCTGGGACCCAAGTGTCTGGGCCTCCGACTGCTCCAGCAGACAGGCAGTGCTCCCTGCTGAGACCCCAATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR CCA 72 bp TATGCGGAGGACAACCTCAGGCTCACACACACTTGCTaGCCGGCTCCAGAGGGGCGGAGGCACCTACAGGAG +
Preference number: 3 (lower is better)
Translates to: YAEDNLRLTHTC*PAPEGRRHLQE
Trigger: CTCCTGTAGGTGCCTCCGCCCCTCTGGAGCCGGCCAGCAAGTGTGTGTGAGCCTGAGGTTGTCCTCCGCATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR GCA 72 bp CACTGCCCAATTCCCAAGGCTGACCCTGGGGAGATATaGCCCACCATCCTGGGCATGGGGCTGTGGGTTAGG +
Preference number: 3 (lower is better)
Translates to: HCPIPKADPGEI*PTILGMGLWVR
Trigger: CCTAACCCACAGCCCCATGCCCAGGATGGTGGGGCATATCTCCCCAGGGTCAGCCTTGGGAATTGGGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR GCA 72 bp AGATATGCGGAGGACAACCTCAGGCTCACACACACTTaGTGGCCGGCTCCAGAGGGGCGGAGGCACCTACAG +
Preference number: 3 (lower is better)
Translates to: RYAEDNLRLTHT*WPAPEGRRHLQ
Trigger: CTGTAGGTGCCTCCGCCCCTCTGGAGCCGGCCAGCAAGTGTGTGTGAGCCTGAGGTTGTCCTCCGCATATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR CCA 72 bp CCCAGCCTCCCAAGAGCTGAATTCCCCAGGGATGCCTaGGGGAGTCCCAGGTGGAGAATGTGGTGCTGCCTT +
Preference number: 3 (lower is better)
Translates to: PSLPRAEFPRDA*GSPRWRMWCCL
Trigger: AAGGCAGCACCACATTCTCCACCTGGGACTCCCCCAGGCATCCCTGGGGAATTCAGCTCTTGGGAGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR CCA 72 bp ACCCGCAAGATGGGGCAGAAAGGGTCCTTGTCCGGGTaGAAGCGGCAGGTCTTCATGTCCCTGGCTGTCAGG +
Preference number: 3 (lower is better)
Translates to: TRKMGQKGSLSG*KRQVFMSLAVR
Trigger: CCTGACAGCCAGGGACATGAAGACCTGCCGCTTCCACCCGGACAAGGACCCTTTCTGCCCCATCTTGCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534820.1
3UTR-3UTR CAA 90 bp TTGACCACGTCCCCTACCCGCAAGATGGGGCAGAAAGGGTCCTTGTCCGGGTGGTCCCTGGCTGTCAGGTaGGGAAGGAGGTTTCCCTTC +
Preference number: 3 (lower is better)
Translates to: LTTSPTRKMGQKGSLSGWSLAVR*GRRFPF
Trigger: GAAGGGAAACCTCCTTCCCAACCTGACAGCCAGGGA...CCACCCGGACAAGGACCCTTTCTGCCCCATCTTGCGGGTAGGGGACGTGGTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534820.1
3UTR TCA 72 bp TTAAGACCCTATGGGGACAGGCCTGGCCAACCCAGCTaGGCAGCTCACAAGGCACCAGGCCTTACTGGAGCA +
Preference number: 3 (lower is better)
Translates to: LRPYGDRPGQPS*AAHKAPGLTGA
Trigger: TGCTCCAGTAAGGCCTGGTGCCTTGTGAGCTGCTCAGCTGGGTTGGCCAGGCCTGTCCCCATAGGGTCTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR TCA 72 bp TGGTCAGATCTCCAGGCACTGCCCAATTCCCAAGGCTaGCCCTGGGGAGATATGCCCCACCATCCTGGGCAT +
Preference number: 3 (lower is better)
Translates to: WSDLQALPNSQG*PWGDMPHHPGH
Trigger: ATGCCCAGGATGGTGGGGCATATCTCCCCAGGGTCAGCCTTGGGAATTGGGCAGTGCCTGGAGATCTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR GCA 72 bp AGATCGAGACTCGTGCGCGCCAGTTTGGCAAAATCCTaGCCCGCAAACTTGACCACGTCCCCTACCCGCAAG +
Preference number: 3 (lower is better)
Translates to: RSRLVRASLAKS*PANLTTSPTRK
Trigger: CTTGCGGGTAGGGGACGTGGTCAAGTTTGCGGGGCAGGATTTTGCCAAACTGGCGCGCACGAGTCTCGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534820.1
3UTR CCA 72 bp ATGGGGCACCTTATTAAGACCCTATGGGGACAGGCCTaGCCAACCCAGCTGAGCAGCTCACAAGGCACCAGG +
Preference number: 3 (lower is better)
Translates to: MGHLIKTLWGQA*PTQLSSSQGTR
Trigger: CCTGGTGCCTTGTGAGCTGCTCAGCTGGGTTGGCCAGGCCTGTCCCCATAGGGTCTTAATAAGGTGCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CAA 90 bp TGCCTGGGGGAGTCCCAGGTGGAGAATGTGGTGCTGCCTTCACTGATGTCTCTGGGAGTGAAGGTGAGATaGGGGTCTCAGCAGGGAGCA +
Preference number: 3 (lower is better)
Translates to: CLGESQVENVVLPSLMSLGVKVR*GSQQGA
Trigger: TGCTCCCTGCTGAGACCCCAATCTCACCTTCACTCC...CAGAGACATCAGTGAAGGCAGCACCACATTCTCCACCTGGGACTCCCCCAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CAA 90 bp CCAAAAATTAGCCGGGCTTGGTCCCAGCTACTCCGGAAGCTGAGGCAGGAGAATCTCGTGCGCGCCAGTTaGGCAAAATCCTGCCCCGCA +
Preference number: 3 (lower is better)
Translates to: PKISRAWSQLLRKLRQENLVRAS*AKSCPA
Trigger: TGCGGGGCAGGATTTTGCCAAACTGGCGCGCACGAG...ATTCTCCTGCCTCAGCTTCCGGAGTAGCTGGGACCAAGCCCGGCTAATTTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534820.1
3UTR-3UTR CAA 90 bp GGCGGAGGCACCTACAGGAGGACCACCTCCATCTGGGTAAAAGGGAGGGGTTGGCATGTGGGTTCCTTTTaGGCCATGAACTGTGGCACT +
Preference number: 3 (lower is better)
Translates to: GGGTYRRTTSIWVKGRGWHVGSF*AMNCGT
Trigger: AGTGCCACAGTTCATGGCCAAAAAGGAACCCACATG...CCAACCCCTCCCTTTTACCCAGATGGAGGTGGTCCTCCTGTAGGTGCCTCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CAA 90 bp TCCCAGCTCTCTCACATCCTGGCTATCTGGCCTGGGGCAAATGACTCAGTCTCTGCACTTGGTAGGCCCTaGTGGCCATCTGTCCTACAT +
Preference number: 3 (lower is better)
Translates to: SQLSHILAIWPGANDSVSALGRP*WPSVLH
Trigger: ATGTAGGACAGATGGCCACAAGGGCCTACCAAGTGC...AGAGACTGAGTCATTTGCCCCAGGCCAGATAGCCAGGATGTGAGAGAGCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CAA 90 bp GCAGAAAGGGTCCTTGTCCGGGTGGAAGCGGCAGGTCTTCATGTCCCTGGCTGTTTTCCCTTCTCAAAGTaGAAGAGGGGGAAACGGATG +
Preference number: 3 (lower is better)
Translates to: AERVLVRVEAAGLHVPGCFPFSK*KRGKRM
Trigger: CATCCGTTTCCCCCTCTTCAACTTTGAGAAGGGAAA...ACAGCCAGGGACATGAAGACCTGCCGCTTCCACCCGGACAAGGACCCTTTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534820.1
3UTR CCA 72 bp AGGGCTGATGGACCCTGGGAGTTCATTCTTCTCTCATaGGGTGTGGGCGATGGAGTTAGTCAGACGGACGTT +
Preference number: 3 (lower is better)
Translates to: RADGPWEFILLS*GVGDGVSQTDV
Trigger: AACGTCCGTCTGACTAACTCCATCGCCCACACCCCATGAGAGAAGAATGAACTCCCAGGGTCCATCAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR CCA 72 bp GAGGTGGTGACAAATGATTTCCTCCCATCCTCCAGGTaGGAGACGGAGGCAGGGAGAACGGAAAGTGACATG +
Preference number: 3 (lower is better)
Translates to: EVVTNDFLPSSR*ETEAGRTESDM
Trigger: CATGTCACTTTCCGTTCTCCCTGCCTCCGTCTCCCACCTGGAGGATGGGAGGAAATCATTTGTCACCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534820.1
3UTR TCA 72 bp GGGAGTCCCAGGTGGAGAATGTGGTGCTGCCTTCACTaGTGTCTCTGCTGGAGAAGCATAGTCTGGTCAGAT +
Preference number: 3 (lower is better)
Translates to: GSPRWRMWCCLH*CLCWRSIVWSD
Trigger: ATCTGACCAGACTATGCTTCTCCAGCAGAGACATCAGTGAAGGCAGCACCACATTCTCCACCTGGGACTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR CCA 72 bp TCAGACGGACGTTCAAATCCCAGCTCTCTCACATCCTaGCTATCTGGCCTGGGGCAAATGACTCAGTCTCTC +
Preference number: 3 (lower is better)
Translates to: SDGRSNPSSLTS*LSGLGQMTQSL
Trigger: GAGAGACTGAGTCATTTGCCCCAGGCCAGATAGCCAGGATGTGAGAGAGCTGGGATTTGAACGTCCGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR CCA 72 bp ACGTTCAAATCCCAGCTCTCTCACATCCTGGCTATCTaGCCTGGGGCAAATGACTCAGTCTCTCTGAGCCTT +
Preference number: 3 (lower is better)
Translates to: TFKSQLSHILAI*PGANDSVSLSL
Trigger: AAGGCTCAGAGAGACTGAGTCATTTGCCCCAGGCCAGATAGCCAGGATGTGAGAGAGCTGGGATTTGAACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR CCA 72 bp ATGGACCCTGGGAGTTCATTCTTCTCTCATGGGGTGTaGGCGATGGAGTTAGTCAGACGGACGTTCAAATCC +
Preference number: 3 (lower is better)
Translates to: MDPGSSFFSHGV*AMELVRRTFKS
Trigger: GGATTTGAACGTCCGTCTGACTAACTCCATCGCCCACACCCCATGAGAGAAGAATGAACTCCCAGGGTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR GCA 72 bp GACAGCCATGCCTTCTGTTTCCTTCTAAATTTGGGATaGACCCAAGTCAGAGATGGGGTCCCTCACCACTGT +
Preference number: 3 (lower is better)
Translates to: DSHAFCFLLNLG*TQVRDGVPHHC
Trigger: ACAGTGGTGAGGGACCCCATCTCTGACTTGGGTGCATCCCAAATTTAGAAGGAAACAGAAGGCATGGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR GCA 72 bp AAATTGTATATGCTTAGGATTCACAAAACCTGGTTCTaGCCCAGAGCCCTGCCCTGGGGCAATTTCTGGGCC +
Preference number: 3 (lower is better)
Translates to: KLYMLRIHKTWF*PRALPWGNFWA
Trigger: GGCCCAGAAATTGCCCCAGGGCAGGGCTCTGGGGCAGAACCAGGTTTTGTGAATCCTAAGCATATACAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR CCA 72 bp AGAGGACAGAAAGGGGATAGAGGATGTCTGGGTCAATaGATCCAGCTTCCTGTTCTTGCCTCCTTCCCTGAA +
Preference number: 3 (lower is better)
Translates to: RGQKGDRGCLGQ*IQLPVLASFPE
Trigger: TTCAGGGAAGGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTCTATCCCCTTTCTGTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR TCA 72 bp GCTCTCTCACATCCTGGCTATCTGGCCTGGGGCAAATaGCTCAGTCTCTCTGAGCCTTGGTTTATCTTCAAA +
Preference number: 3 (lower is better)
Translates to: ALSHPGYLAWGK*LSLSEPWFIFK
Trigger: TTTGAAGATAAACCAAGGCTCAGAGAGACTGAGTCATTTGCCCCAGGCCAGATAGCCAGGATGTGAGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR TCA 72 bp CTGAAGGGCCAGGACATGTGGGTTCCTTTTTGGCCATaGACTGTGGCACTGAACCAGTCATTTTCCCTTTCT +
Preference number: 3 (lower is better)
Translates to: LKGQDMWVPFWP*TVALNQSFSLS
Trigger: AGAAAGGGAAAATGACTGGTTCAGTGCCACAGTTCATGGCCAAAAAGGAACCCACATGTCCTGGCCCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR TCA 72 bp ACATGTGGGTTCCTTTTTGGCCATGAACTGTGGCACTaGACCAGTCATTTTCCCTTTCTGGCCTCAGTTTGC +
Preference number: 3 (lower is better)
Translates to: TCGFLFGHELWH*TSHFPFLASVC
Trigger: GCAAACTGAGGCCAGAAAGGGAAAATGACTGGTTCAGTGCCACAGTTCATGGCCAAAAAGGAACCCACATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR GCA 72 bp CATCTAGCACACAGAAGTGGTAACTTAGTTCAGATATaGGGAGGACAACCTCAGGCTCACACACACTTGCTG +
Preference number: 3 (lower is better)
Translates to: HLAHRSGNLVQI*GGQPQAHTHLL
Trigger: CAGCAAGTGTGTGTGAGCCTGAGGTTGTCCTCCGCATATCTGAACTAAGTTACCACTTCTGTGTGCTAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CAA 90 bp AGAGATGCCCCCAAATTGTATATGCTTAGGATTCACAAAACCTGGTTCTGCCCCTATAATCTCTACTCTTaGGGAAGGGGATGGCTCAGG +
Preference number: 3 (lower is better)
Translates to: RDAPKLYMLRIHKTWFCPYNLYS*GRGWLR
Trigger: CCTGAGCCATCCCCTTCCCAAAGAGTAGAGATTATA...GGGGCAGAACCAGGTTTTGTGAATCCTAAGCATATACAATTTGGGGGCATCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CAA 90 bp CTTTCTAAAGAGATGCCCCCAAATTGTATATGCTTAGGATTCACAAAACCTGGTCCTAAAATGCAAACTTaGTTGCTGGGAAAGGCATGG +
Preference number: 3 (lower is better)
Translates to: LSKEMPPNCICLGFTKPGPKMQT*LLGKAW
Trigger: CCATGCCTTTCCCAGCAACAAAGTTTGCATTTTAGG...ACCAGGTTTTGTGAATCCTAAGCATATACAATTTGGGGGCATCTCTTTAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR-3UTR CAA 90 bp GCCAGATGCAGATTTATCATGAAGCTATTGAAACATTCTTTAGGCTCATTCACTTGTTTCCTTCTAAATTaGGGATGCACCCAAGTCAGA +
Preference number: 3 (lower is better)
Translates to: ARCRFIMKLLKHSLGSFTCFLLN*GCTQVR
Trigger: TCTGACTTGGGTGCATCCCAAATTTAGAAGGAAACA...AGTGAATGAGCCTAAAGAATGTTTCAATAGCTTCATGATAAATCTGCATCTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp CTCAGCAGGGAGCACTGCCTGTCTGCTGGAGCAGTCGGAGGCCCAGACACTTGGCAGGGTGGAGGCGGCTaGAGCAGCAGGGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: LSREHCLSAGAVGGPDTWQGGGG*SSRADG
Trigger: TCCATCAGCCCTGCTGCTTCAGCCGCCTCCACCCTG...CCAAGTGTCTGGGCCTCCGACTGCTCCAGCAGACAGGCAGTGCTCCCTGCTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp CCCTACCCGCAAGATGGGGCAGAAAGGGTCCTTGTCCGGGTGGAAGCGGCAGGTTGGGCAAAGGGGAGCTaGGGTGGGGGCCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PYPQDGAERVLVRVEAAGWAKGS*GGGLSP
Trigger: AGGAGACAGGCCCCCACCTCAGCTCCCCTTTGCCCA...ACCTGCCGCTTCCACCCGGACAAGGACCCTTTCTGCCCCATCTTGCGGGTAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR GCA 90 bp CTCAGCAGGGAGCACTGCCTGTCTGCTGGAGCAGTCGGAGGCCCAGACACTTGGGGAGCACTGCCTGTCTaGTGGAGCAGTCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LSREHCLSAGAVGGPDTWGALPV*WSSRRP
Trigger: GGGCCTCCGACTGCTCCAGCAGACAGGCAGTGCTCC...CCAAGTGTCTGGGCCTCCGACTGCTCCAGCAGACAGGCAGTGCTCCCTGCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp TTGACCACGTCCCCTACCCGCAAGATGGGGCAGAAAGGGTCCTTGTCCGGGTGGCCTGCCCCGCAAACTTaGCCACGTCCCCTACCCGCA +
Preference number: 4 (lower is better)
Translates to: LTTSPTRKMGQKGSLSGWPAPQT*PRPLPA
Trigger: TGCGGGTAGGGGACGTGGTCAAGTTTGCGGGGCAGG...CCACCCGGACAAGGACCCTTTCTGCCCCATCTTGCGGGTAGGGGACGTGGTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR TCA 90 bp CTCAGCAGGGAGCACTGCCTGTCTGCTGGAGCAGTCGGAGGCCCAGACACTTGGTCTTGCCTCCTTCCCTaGAGGGCCAGGACATGTGGG +
Preference number: 4 (lower is better)
Translates to: LSREHCLSAGAVGGPDTWSCLLP*RARTCG
Trigger: CCCACATGTCCTGGCCCTTCAGGGAAGGAGGCAAGA...CCAAGTGTCTGGGCCTCCGACTGCTCCAGCAGACAGGCAGTGCTCCCTGCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp ACCCGCAAGATGGGGCAGAAAGGGTCCTTGTCCGGGTGGAAGCGGCAGGTCTTCGGCAGGAGAATGGCGTaGACCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TRKMGQKGSLSGWKRQVFGRRMA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCC...GAAGACCTGCCGCTTCCACCCGGACAAGGACCCTTTCTGCCCCATCTTGCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR GCA 90 bp CCTACGACAGGATCCCAGGTCCGGGAATCAAATCCCCAGAGTGAGGGGGCCCAGCTTCCCCACTTCCTGTaGCGTGTGTTGAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: PTTGSQVRESNPQSEGAQLPHFL*RVLRGR
Trigger: GCGGCCCCTCAACACACGGCACAGGAAGTGGGGAAG...CTGGGCCCCCTCACTCTGGGGATTTGATTCCCGGACCTGGGATCCTGTCGTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GACCACGTCCCCTACCCGCAAGATGGGGCAGAAAGGGTCCTTGTCCGGGTGGAACGCTCAGGCCCGCACTaGCTGTCTGATACACAGCGG +
Preference number: 4 (lower is better)
Translates to: DHVPYPQDGAERVLVRVERSGPH*LSDTQR
Trigger: CCGCTGTGTATCAGACAGCCAGTGCGGGCCTGAGCG...TTCCACCCGGACAAGGACCCTTTCTGCCCCATCTTGCGGGTAGGGGACGTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR TCA 90 bp GGCGGAGGCACCTACAGGAGGACCACCTCCATCTGGGTAAAAGGGAGGGGTTGGCGCTGTCGAGCCGGGTaGAGGAGTATTTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: GGGTYRRTTSIWVKGRGWRCRAG*RSIWGC
Trigger: GCATCCCCAAATACTCCTTCACCCGGCTCGACAGCG...CCAACCCCTCCCTTTTACCCAGATGGAGGTGGTCCTCCTGTAGGTGCCTCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp CCCTACCCGCAAGATGGGGCAGAAAGGGTCCTTGTCCGGGTGGAAGCGGCAGGTCCCCTACCCGCAAGATaGGGCAGAAAGGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PYPQDGAERVLVRVEAAGPLPAR*GRKGPC
Trigger: ACAAGGACCCTTTCTGCCCCATCTTGCGGGTAGGGG...ACCTGCCGCTTCCACCCGGACAAGGACCCTTTCTGCCCCATCTTGCGGGTAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR CCA 90 bp CTGGGAGACAGATCGAGACTCGTGCGCGCCAGTTTGGCAAAATCCTGCCCCGCACTCCCATCCTCCAGGTaGGAGACGGAGGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LGDRSRLVRASLAKSCPALPSSR*ETEAGR
Trigger: TCTCCCTGCCTCCGTCTCCCACCTGGAGGATGGGAG...TGCGGGGCAGGATTTTGCCAAACTGGCGCGCACGAGTCTCGATCTGTCTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534820.1
3UTR CAA 72 bp CAGATATGCGGAGGACAACCTCAGGCTCACACACACTaGCTGGCCGGCTCCAGAGGGGCGGAGGCACCTACA +
Preference number: 4 (lower is better)
Translates to: QICGGQPQAHTH*LAGSRGAEAPT
Trigger: TGTAGGTGCCTCCGCCCCTCTGGAGCCGGCCAGCAAGTGTGTGTGAGCCTGAGGTTGTCCTCCGCATATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR CAA 72 bp ACGTCCCCTACCCGCAAGATGGGGCAGAAAGGGTCCTaGTCCGGGTGGAAGCGGCAGGTCTTCATGTCCCTG +
Preference number: 4 (lower is better)
Translates to: TSPTRKMGQKGS*SGWKRQVFMSL
Trigger: CAGGGACATGAAGACCTGCCGCTTCCACCCGGACAAGGACCCTTTCTGCCCCATCTTGCGGGTAGGGGACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR TCA 90 bp CAGATATGCGGAGGACAACCTCAGGCTCACACACACTTGCTGGCCGGCTCCAGACCTGGCCAACCCAGCTaGGCAGCTCACAAGGCACCA +
Preference number: 4 (lower is better)
Translates to: QICGGQPQAHTHLLAGSRPGQPS*AAHKAP
Trigger: TGGTGCCTTGTGAGCTGCTCAGCTGGGTTGGCCAGG...TCTGGAGCCGGCCAGCAAGTGTGTGTGAGCCTGAGGTTGTCCTCCGCATATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp GATGGGCCCTCCTCAAGCTCAGAGACGCACGGCTCCCACATGGGCAAAGGGGAGTCTCAGCTTCCATCATaGTGGGCCCTCCTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: DGPSSSSETHGSHMGKGESQLPS*WALLKL
Trigger: GAGCTTGAGGAGGGCCCATCATGATGGAAGCTGAGA...CTCCCCTTTGCCCATGTGGGAGCCGTGCGTCTCTGAGCTTGAGGAGGGCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR GCA 90 bp CAGATATGCGGAGGACAACCTCAGGCTCACACACACTTGCTGGCCGGCTCCAGACCCTCCCATGCCCCTTaGTCAGGCAGGGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: QICGGQPQAHTHLLAGSRPSHAP*SGRVLC
Trigger: ACAGAGGACCCTGCCTGAGCAAGGGGCATGGGAGGG...TCTGGAGCCGGCCAGCAAGTGTGTGTGAGCCTGAGGTTGTCCTCCGCATATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp AGTCTGGTCAGATCTCCAGGCACTGCCCAATTCCCAAGGCTGACCCTGGGGAGAAGGCTCACACACACTTaGTGGCCGGCTCCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLVRSPGTAQFPRLTLGRRLTHT*WPAPEG
Trigger: CCCCTCTGGAGCCGGCCAGCAAGTGTGTGTGAGCCT...TCTCCCCAGGGTCAGCCTTGGGAATTGGGCAGTGCCTGGAGATCTGACCAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp GACCACGTCCCCTACCCGCAAGATGGGGCAGAAAGGGTCCTTGTCCGGGTGGAAGCCGAAATCGCGCCATaGACTCTAGCCTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: DHVPYPQDGAERVLVRVEAEIAP*TLAWET
Trigger: TGTCTCCCAGGCTAGAGTGCATGGCGCGATTTCGGC...TTCCACCCGGACAAGGACCCTTTCTGCCCCATCTTGCGGGTAGGGGACGTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR GCA 90 bp GACCACGTCCCCTACCCGCAAGATGGGGCAGAAAGGGTCCTTGTCCGGGTGGAATGCTCAGTAAAGAAGTaGTGTGGTGGCCGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: DHVPYPQDGAERVLVRVECSVKK*CGGRVR
Trigger: CCGCACCCGGCCACCACAGCACTTCTTTACTGAGCA...TTCCACCCGGACAAGGACCCTTTCTGCCCCATCTTGCGGGTAGGGGACGTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR CCA 90 bp CCCTCCTCAAGCTCAGAGACGCACGGCTCCCACATGGGCAAAGGGGAGCTGAGGCCCTGGCTGTCAGGTTaGGAAGGAGGTTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PSSSSETHGSHMGKGELRPWLSG*EGGFPS
Trigger: AGAAGGGAAACCTCCTTCCCAACCTGACAGCCAGGG...CCTCAGCTCCCCTTTGCCCATGTGGGAGCCGTGCGTCTCTGAGCTTGAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR CCA 90 bp GACCACGTCCCCTACCCGCAAGATGGGGCAGAAAGGGTCCTTGTCCGGGTGGAATCGTGCGCGCCAGTTTaGCAAAATCCTGCCCCGCAA +
Preference number: 4 (lower is better)
Translates to: DHVPYPQDGAERVLVRVESCAPV*QNPAPQ
Trigger: TTGCGGGGCAGGATTTTGCCAAACTGGCGCGCACGA...TTCCACCCGGACAAGGACCCTTTCTGCCCCATCTTGCGGGTAGGGGACGTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000534820.1
3UTR CAA 72 bp CTGAAGCTGTCCCTTCCCCACTTCCTGTGCCGTGTGTaGAGGGGCCGCCCTCCATCTACAGTTGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LKLSLPHFLCRV*RGRPPSTVELV
Trigger: CACCAGCTCAACTGTAGATGGAGGGCGGCCCCTCAACACACGGCACAGGAAGTGGGGAAGGGACAGCTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp GAAGCAGCAGGGCTGATGGACCCTGGGAGTTCATTCTTCTCTCATGGGGTGTGGTCCTGTGCCGTGTGTTaGGGGGCCGCCCTCCATCTA +
Preference number: 4 (lower is better)
Translates to: EAAGLMDPGSSFFSHGVWSCAVC*GAALHL
Trigger: TAGATGGAGGGCGGCCCCTCAACACACGGCACAGGA...CCACACCCCATGAGAGAAGAATGAACTCCCAGGGTCCATCAGCCCTGCTGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp CTCAGCAGGGAGCACTGCCTGTCTGCTGGAGCAGTCGGAGGCCCAGACACTTGGCTTGGGTCCCAGCTATaGTCATGGAATGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LSREHCLSAGAVGGPDTWLGSQL*SWNEQQ
Trigger: CTGCTGCTCATTCCATGAGCATAGCTGGGACCCAAG...CCAAGTGTCTGGGCCTCCGACTGCTCCAGCAGACAGGCAGTGCTCCCTGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp AGTCTGGTCAGATCTCCAGGCACTGCCCAATTCCCAAGGCTGACCCTGGGGAGACACAAAACCTGGTTCTaGCCCAGAGCCCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SLVRSPGTAQFPRLTLGRHKTWF*PRALPW
Trigger: CCAGGGCAGGGCTCTGGGGCAGAACCAGGTTTTGTG...TCTCCCCAGGGTCAGCCTTGGGAATTGGGCAGTGCCTGGAGATCTGACCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GATGGGCCCTCCTCAAGCTCAGAGACGCACGGCTCCCACATGGGCAAAGGGGAGTCCTCCTGTCTGGCTTaGAGCCTTACGTTTCCACTG +
Preference number: 4 (lower is better)
Translates to: DGPSSSSETHGSHMGKGESSCLA*SLTFPL
Trigger: CAGTGGAAACGTAAGGCTCCAAGCCAGACAGGAGGA...CTCCCCTTTGCCCATGTGGGAGCCGTGCGTCTCTGAGCTTGAGGAGGGCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534820.1
3UTR CAA 72 bp AGCCTGGGAGACAGATCGAGACTCGTGCGCGCCAGTTaGGCAAAATCCTGCCCCGCAAACTTGACCACGTCC +
Preference number: 4 (lower is better)
Translates to: SLGDRSRLVRAS*AKSCPANLTTS
Trigger: GGACGTGGTCAAGTTTGCGGGGCAGGATTTTGCCAAACTGGCGCGCACGAGTCTCGATCTGTCTCCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR GCA 90 bp CCCTCCTCAAGCTCAGAGACGCACGGCTCCCACATGGGCAAAGGGGAGCTGAGGAGTTTGGCAAAATCCTaGCCCGCAAACTTGACCACG +
Preference number: 4 (lower is better)
Translates to: PSSSSETHGSHMGKGELRSLAKS*PANLTT
Trigger: CGTGGTCAAGTTTGCGGGGCAGGATTTTGCCAAACT...CCTCAGCTCCCCTTTGCCCATGTGGGAGCCGTGCGTCTCTGAGCTTGAGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR GCA 90 bp AGTCTGGTCAGATCTCCAGGCACTGCCCAATTCCCAAGGCTGACCCTGGGGAGAGCACGTCGAAGCGGATaGCAAAAGCCTTCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SLVRSPGTAQFPRLTLGRARRSG*QKPSGG
Trigger: CCCTCCTGAAGGCTTTTGGCATCCGCTTCGACGTGC...TCTCCCCAGGGTCAGCCTTGGGAATTGGGCAGTGCCTGGAGATCTGACCAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp AGTCTGGTCAGATCTCCAGGCACTGCCCAATTCCCAAGGCTGACCCTGGGGAGACTGTGGTCTGGTCGCTaGGGTACACTGGGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: SLVRSPGTAQFPRLTLGRLWSGR*GTLGWS
Trigger: TGACCAACCCAGTGTACCCCAGCGACCAGACCACAG...TCTCCCCAGGGTCAGCCTTGGGAATTGGGCAGTGCCTGGAGATCTGACCAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp TCCCAGCTCTCTCACATCCTGGCTATCTGGCCTGGGGCAAATGACTCAGTCTCTCTATGGGGACAGGCCTaGCCAACCCAGCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SQLSHILAIWPGANDSVSLWGQA*PTQLSS
Trigger: GCTGCTCAGCTGGGTTGGCCAGGCCTGTCCCCATAG...AGAGACTGAGTCATTTGCCCCAGGCCAGATAGCCAGGATGTGAGAGAGCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp CCTACGACAGGATCCCAGGTCCGGGAATCAAATCCCCAGAGTGAGGGGGCCCAGTCTCAGCTTCCATCATaGTGGGCGTTTCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: PTTGSQVRESNPQSEGAQSQLPS*WAFPLC
Trigger: ACACAGTGGAAACGCCCATCATGATGGAAGCTGAGA...CTGGGCCCCCTCACTCTGGGGATTTGATTCCCGGACCTGGGATCCTGTCGTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp CACTGTAGGAGAGGACAGAAAGGGGATAGAGGATGTCTGGGTCAATGGATCCAGCCTGCCCCGCAAACTTaGCCACGTCCCCTACCCGCA +
Preference number: 4 (lower is better)
Translates to: HCRRGQKGDRGCLGQWIQPAPQT*PRPLPA
Trigger: TGCGGGTAGGGGACGTGGTCAAGTTTGCGGGGCAGG...CTGGATCCATTGACCCAGACATCCTCTATCCCCTTTCTGTCCTCTCCTACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp CAGATATGCGGAGGACAACCTCAGGCTCACACACACTTGCTGGCCGGCTCCAGACGGAGCCCTTCACCTTaGTTACCACCGAGGACTCAA +
Preference number: 4 (lower is better)
Translates to: QICGGQPQAHTHLLAGSRRSPSP*LPPRTQ
Trigger: TTGAGTCCTCGGTGGTAACCAAGGTGAAGGGCTCCG...TCTGGAGCCGGCCAGCAAGTGTGTGTGAGCCTGAGGTTGTCCTCCGCATATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp CCAAAAATTAGCCGGGCTTGGTCCCAGCTACTCCGGAAGCTGAGGCAGGAGAATGGGTCCTTGTCCGGGTaGAAGCGGCAGGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: PKISRAWSQLLRKLRQENGSLSG*KRQVFM
Trigger: CATGAAGACCTGCCGCTTCCACCCGGACAAGGACCC...ATTCTCCTGCCTCAGCTTCCGGAGTAGCTGGGACCAAGCCCGGCTAATTTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR CCA 90 bp TCCCAGCTCTCTCACATCCTGGCTATCTGGCCTGGGGCAAATGACTCAGTCTCTCCGTGCGCGCCAGTTTaGCAAAATCCTGCCCCGCAA +
Preference number: 4 (lower is better)
Translates to: SQLSHILAIWPGANDSVSPCAPV*QNPAPQ
Trigger: TTGCGGGGCAGGATTTTGCCAAACTGGCGCGCACGG...AGAGACTGAGTCATTTGCCCCAGGCCAGATAGCCAGGATGTGAGAGAGCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GAGGATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCTTCCCTGAAGAGGCAGGGTCCTCTGTaGGGAGGCCTGGAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: EDVWVNGSSFLFLPPSLKRQGPL*GGLEPL
Trigger: CAAAGGCTCCAGGCCTCCCCACAGAGGACCCTGCCT...CTTCAGGGAAGGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp CTCAGCAGGGAGCACTGCCTGTCTGCTGGAGCAGTCGGAGGCCCAGACACTTGGGGATGTCTGGGTCAATaGATCCAGCTTCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LSREHCLSAGAVGGPDTWGCLGQ*IQLPVL
Trigger: AAGAACAGGAAGCTGGATCCATTGACCCAGACATCC...CCAAGTGTCTGGGCCTCCGACTGCTCCAGCAGACAGGCAGTGCTCCCTGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp CAGATATGCGGAGGACAACCTCAGGCTCACACACACTTGCTGGCCGGCTCCAGAAGGACCACCTCCATCTaGGTAAAAGGGAGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: QICGGQPQAHTHLLAGSRRTTSI*VKGRGW
Trigger: CCAACCCCTCCCTTTTACCCAGATGGAGGTGGTCCT...TCTGGAGCCGGCCAGCAAGTGTGTGTGAGCCTGAGGTTGTCCTCCGCATATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GAGGTGGTGACAAATGATTTCCTCCCATCCTCCAGGTGGGAGACGGAGGCAGGGAAAGAAGTGCTGTGGTaGCCGGGTGCGGTGATTCAC +
Preference number: 4 (lower is better)
Translates to: EVVTNDFLPSSRWETEAGKEVLW*PGAVIH
Trigger: GTGAATCACCGCACCCGGCCACCACAGCACTTCTTT...CCCTGCCTCCGTCTCCCACCTGGAGGATGGGAGGAAATCATTTGTCACCACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR GCA 90 bp AAAGGGGATAGAGGATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCTGGCTCAGGTGCTCCTaGCCCAGGGGTCCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: KGDRGCLGQWIQLPVLASWLRCS*PRGPRK
Trigger: CTTCCTAGGACCCCTGGGGCAGGAGCACCTGAGCCA...GGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTCTATCCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp CTCAGCAGGGAGCACTGCCTGTCTGCTGGAGCAGTCGGAGGCCCAGACACTTGGCATGCCCACTCTGACTaGCAGATGCAGATTTATCAT +
Preference number: 4 (lower is better)
Translates to: LSREHCLSAGAVGGPDTWHAHSD*QMQIYH
Trigger: ATGATAAATCTGCATCTGGCAGTCAGAGTGGGCATG...CCAAGTGTCTGGGCCTCCGACTGCTCCAGCAGACAGGCAGTGCTCCCTGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GAGGATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCTTCCCTGAAGGACGAGATCACGACCTaGAGGGGGCAGCTTAGAGGG +
Preference number: 4 (lower is better)
Translates to: EDVWVNGSSFLFLPPSLKDEITT*RGQLRG
Trigger: CCCTCTAAGCTGCCCCCTCCAGGTCGTGATCTCGTC...CTTCAGGGAAGGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp AAAGGGGATAGAGGATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCAGGCCCCCGAATCGGTaGACTGCTTCTCCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KGDRGCLGQWIQLPVLASRPPNR*TASPLW
Trigger: CCACAGCGGAGAAGCAGTCCACCGATTCGGGGGCCT...GGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTCTATCCCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GAAGCAGCAGGGCTGATGGACCCTGGGAGTTCATTCTTCTCTCATGGGGTGTGGCACCCAAGTCAGAGATaGGGTCCCTCACCACTGTCT +
Preference number: 4 (lower is better)
Translates to: EAAGLMDPGSSFFSHGVWHPSQR*GPSPLS
Trigger: AGACAGTGGTGAGGGACCCCATCTCTGACTTGGGTG...CCACACCCCATGAGAGAAGAATGAACTCCCAGGGTCCATCAGCCCTGCTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GTCCTACATTATAATCTCTACTCTTTGGGAAGGGGATGGCTCAGGTGCTCCTGCCTCACACACACTTGCTaGCCGGCTCCAGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: VLHYNLYSLGRGWLRCSCLTHTC*PAPEGR
Trigger: CCGCCCCTCTGGAGCCGGCCAGCAAGTGTGTGTGAG...GCAGGAGCACCTGAGCCATCCCCTTCCCAAAGAGTAGAGATTATAATGTAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GAGGTGGTGACAAATGATTTCCTCCCATCCTCCAGGTGGGAGACGGAGGCAGGGCTGTCTCCTCCTGTCTaGCTTGGAGCCTTACGTTTC +
Preference number: 4 (lower is better)
Translates to: EVVTNDFLPSSRWETEAGLSPPV*LGALRF
Trigger: GAAACGTAAGGCTCCAAGCCAGACAGGAGGAGACAG...CCCTGCCTCCGTCTCCCACCTGGAGGATGGGAGGAAATCATTTGTCACCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR CCA 90 bp GAGACAGATCGAGACTCGTGCGCGCCAGTTTGGCAAAATCCTGCCCCGCAAACTCCATGCACTCTAGCCTaGGAGACAGATCGAGACTCG +
Preference number: 4 (lower is better)
Translates to: ETDRDSCAPVWQNPAPQTPCTLA*ETDRDS
Trigger: CGAGTCTCGATCTGTCTCCCAGGCTAGAGTGCATGG...AGTTTGCGGGGCAGGATTTTGCCAAACTGGCGCGCACGAGTCTCGATCTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR TCA 90 bp GAGGTGGTGACAAATGATTTCCTCCCATCCTCCAGGTGGGAGACGGAGGCAGGGTTCCCTTCTCAAAGTTaGAGAGGGGGAAACGGATGC +
Preference number: 4 (lower is better)
Translates to: EVVTNDFLPSSRWETEAGFPSQS*RGGNGC
Trigger: GCATCCGTTTCCCCCTCTTCAACTTTGAGAAGGGAA...CCCTGCCTCCGTCTCCCACCTGGAGGATGGGAGGAAATCATTTGTCACCACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR CCA 90 bp TCATTGGGCAAGGCCTTTGCAAGTACCCACCATTTGAGCCTCCTGAACTACTCCGGGTCCTTGTCCGGGTaGAAGCGGCAGGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: SLGKAFASTHHLSLLNYSGSLSG*KRQVFM
Trigger: CATGAAGACCTGCCGCTTCCACCCGGACAAGGACCC...GGAGTAGTTCAGGAGGCTCAAATGGTGGGTACTTGCAAAGGCCTTGCCCAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GAGGATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCTTCCCTGAAGCCCCTACCCGCAAGATaGGGCAGAAAGGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: EDVWVNGSSFLFLPPSLKPLPAR*GRKGPC
Trigger: ACAAGGACCCTTTCTGCCCCATCTTGCGGGTAGGGG...CTTCAGGGAAGGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp TCATTGGGCAAGGCCTTTGCAAGTACCCACCATTTGAGCCTCCTGAACTACTCCTTCTCCGCTGTGGTCTaGTCGCTGGGGTACACTGGG +
Preference number: 4 (lower is better)
Translates to: SLGKAFASTHHLSLLNYSFSAVV*SLGYTG
Trigger: CCCAGTGTACCCCAGCGACCAGACCACAGCGGAGAA...GGAGTAGTTCAGGAGGCTCAAATGGTGGGTACTTGCAAAGGCCTTGCCCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp AGTCTGGTCAGATCTCCAGGCACTGCCCAATTCCCAAGGCTGACCCTGGGGAGATTCTCTCATGGGGTGTaGGCGATGGAGTTAGTCAGA +
Preference number: 4 (lower is better)
Translates to: SLVRSPGTAQFPRLTLGRFSHGV*AMELVR
Trigger: TCTGACTAACTCCATCGCCCACACCCCATGAGAGAA...TCTCCCCAGGGTCAGCCTTGGGAATTGGGCAGTGCCTGGAGATCTGACCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GGCGGAGGCACCTACAGGAGGACCACCTCCATCTGGGTAAAAGGGAGGGGTTGGGTCATTTTCCCTTTCTaGCCTCAGTTTGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: GGGTYRRTTSIWVKGRGWVIFPF*PQFAHL
Trigger: CAGATGAGCAAACTGAGGCCAGAAAGGGAAAATGAC...CCAACCCCTCCCTTTTACCCAGATGGAGGTGGTCCTCCTGTAGGTGCCTCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GAAGCAGCAGGGCTGATGGACCCTGGGAGTTCATTCTTCTCTCATGGGGTGTGGAGGATTCACAAAACCTaGTTCTGCCCCAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: EAAGLMDPGSSFFSHGVWRIHKT*FCPRAL
Trigger: CAGGGCTCTGGGGCAGAACCAGGTTTTGTGAATCCT...CCACACCCCATGAGAGAAGAATGAACTCCCAGGGTCCATCAGCCCTGCTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GAGGATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCTTCCCTGAAGTGGGGGAGTCCCAGGTaGAGAATGTGGTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: EDVWVNGSSFLFLPPSLKWGSPR*RMWCCL
Trigger: AAGGCAGCACCACATTCTCCACCTGGGACTCCCCCA...CTTCAGGGAAGGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp CTTCTAAATTTGGGATGCACCCAAGTCAGAGATGGGGTCCCTCACCACTGTCTATTCCCCAGGGATGCCTaGGGGAGTCCCAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LLNLGCTQVRDGVPHHCLFPRDA*GSPRWR
Trigger: TCTCCACCTGGGACTCCCCCAGGCATCCCTGGGGAA...TAGACAGTGGTGAGGGACCCCATCTCTGACTTGGGTGCATCCCAAATTTAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp GAAGCAGCAGGGCTGATGGACCCTGGGAGTTCATTCTTCTCTCATGGGGTGTGGAGAGAAGAACAAGAATaGCCCCTTCCCTGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: EAAGLMDPGSSFFSHGVWREEQE*PLPWFG
Trigger: CCCAAACCAGGGAAGGGGTCATTCTTGTTCTTCTCT...CCACACCCCATGAGAGAAGAATGAACTCCCAGGGTCCATCAGCCCTGCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp GAGGATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCTTCCCTGAAGCCCTCCATCTACAGTTaGGCTGGTGCAGCTAAGACC +
Preference number: 4 (lower is better)
Translates to: EDVWVNGSSFLFLPPSLKPSIYS*AGAAKT
Trigger: GGTCTTAGCTGCACCAGCTCAACTGTAGATGGAGGG...CTTCAGGGAAGGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp CTTCTAAATTTGGGATGCACCCAAGTCAGAGATGGGGTCCCTCACCACTGTCTACCCAATTCCCAAGGCTaGCCCTGGGGAGATATGCCC +
Preference number: 4 (lower is better)
Translates to: LLNLGCTQVRDGVPHHCLPNSQG*PWGDMP
Trigger: GGGCATATCTCCCCAGGGTCAGCCTTGGGAATTGGG...TAGACAGTGGTGAGGGACCCCATCTCTGACTTGGGTGCATCCCAAATTTAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp AAAGGGGATAGAGGATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCGTCGCTGGGGTACACTaGGTTGGTCAAAGCCGCGAT +
Preference number: 4 (lower is better)
Translates to: KGDRGCLGQWIQLPVLASVAGVH*VGQSRD
Trigger: ATCGCGGCTTTGACCAACCCAGTGTACCCCAGCGAC...GGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTCTATCCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp TCATTGGGCAAGGCCTTTGCAAGTACCCACCATTTGAGCCTCCTGAACTACTCCACTGCTTCTCCGCTGTaGTCTGGTCGCTGGGGTACA +
Preference number: 4 (lower is better)
Translates to: SLGKAFASTHHLSLLNYSTASPL*SGRWGT
Trigger: TGTACCCCAGCGACCAGACCACAGCGGAGAAGCAGT...GGAGTAGTTCAGGAGGCTCAAATGGTGGGTACTTGCAAAGGCCTTGCCCAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp TGTAAAGTGGGGGTTGAGTTAGACAATCCCTGTCACTCATTTGGTCCATTGCCTCGCTCAGGCCCGCACTaGCTGTCTGATACACAGCGG +
Preference number: 4 (lower is better)
Translates to: CKVGVELDNPCHSFGPLPRSGPH*LSDTQR
Trigger: CCGCTGTGTATCAGACAGCCAGTGCGGGCCTGAGCG...AGGCAATGGACCAAATGAGTGACAGGGATTGTCTAACTCAACCCCCACTTTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp TCCCAGCTCTCTCACATCCTGGCTATCTGGCCTGGGGCAAATGACTCAGTCTCTTGGGGTACACTGGGTTaGTCAAAGCCGCGATTTTCA +
Preference number: 4 (lower is better)
Translates to: SQLSHILAIWPGANDSVSWGTLG*SKPRFS
Trigger: TGAAAATCGCGGCTTTGACCAACCCAGTGTACCCCA...AGAGACTGAGTCATTTGCCCCAGGCCAGATAGCCAGGATGTGAGAGAGCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GACCTCATGATCATGCCCACTCTGACTGCCAGATGCAGATTTATCATGAAGCTAGGCCCTAGTGGCCTATaGAGAAGGCCCCCGAATCGG +
Preference number: 4 (lower is better)
Translates to: DLMIMPTLTARCRFIMKLGPSGL*RRPPNR
Trigger: CCGATTCGGGGGCCTTCTCCATAGGCCACTAGGGCC...TAGCTTCATGATAAATCTGCATCTGGCAGTCAGAGTGGGCATGATCATGAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp AGTGAAGTTCTCAGCTTCCATCATGATGGGCCCTCCTCAAGCTCAGAGACGCACAAAATTAGCCGGGCTTaGTCCCAGCTACTCCGGAAG +
Preference number: 4 (lower is better)
Translates to: SEVLSFHHDGPSSSSETHKISRA*SQLLRK
Trigger: CTTCCGGAGTAGCTGGGACCAAGCCCGGCTAATTTT...GTGCGTCTCTGAGCTTGAGGAGGGCCCATCATGATGGAAGCTGAGAACTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR TCA 90 bp CAGATATGCGGAGGACAACCTCAGGCTCACACACACTTGCTGGCCGGCTCCAGACTACAAAGTAGGAGATaGTCAGAAGCTGAACTACTC +
Preference number: 4 (lower is better)
Translates to: QICGGQPQAHTHLLAGSRLQSRR*SEAELL
Trigger: GAGTAGTTCAGCTTCTGATCATCTCCTACTTTGTAG...TCTGGAGCCGGCCAGCAAGTGTGTGTGAGCCTGAGGTTGTCCTCCGCATATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp AAAGGGGATAGAGGATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCGTAAATGAGGACTGCTaGACTCCTGGAACAGGGTCC +
Preference number: 4 (lower is better)
Translates to: KGDRGCLGQWIQLPVLASVNEDC*TPGTGS
Trigger: GGACCCTGTTCCAGGAGTTCAGCAGTCCTCATTTAC...GGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTCTATCCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp AAAGGGGATAGAGGATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCAGCCTGGGGACACGCTaGTTTTCTCAGAAACGCTGT +
Preference number: 4 (lower is better)
Translates to: KGDRGCLGQWIQLPVLASSLGTR*FSQKRC
Trigger: ACAGCGTTTCTGAGAAAAGCAGCGTGTCCCCAGGCT...GGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTCTATCCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GTCCTACATTATAATCTCTACTCTTTGGGAAGGGGATGGCTCAGGTGCTCCTGCCCCTGGCTGTCAGGTTaGGAAGGAGGTTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: VLHYNLYSLGRGWLRCSCPWLSG*EGGFPS
Trigger: AGAAGGGAAACCTCCTTCCCAACCTGACAGCCAGGG...GCAGGAGCACCTGAGCCATCCCCTTCCCAAAGAGTAGAGATTATAATGTAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp CACTGTAGGAGAGGACAGAAAGGGGATAGAGGATGTCTGGGTCAATGGATCCAGTTCTTGGCTTTGTACTaGTCGGCCCCCTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: HCRRGQKGDRGCLGQWIQFLALY*SAPLRK
Trigger: CTTCCTCAAGGGGGCCGACCAGTACAAAGCCAAGAA...CTGGATCCATTGACCCAGACATCCTCTATCCCCTTTCTGTCCTCTCCTACAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp TCATTGGGCAAGGCCTTTGCAAGTACCCACCATTTGAGCCTCCTGAACTACTCCGTGTGTGAAAGTGCCTaGCACTTGGTAGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: SLGKAFASTHHLSLLNYSVCESA*HLVGPC
Trigger: ACAAGGGCCTACCAAGTGCCAGGCACTTTCACACAC...GGAGTAGTTCAGGAGGCTCAAATGGTGGGTACTTGCAAAGGCCTTGCCCAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp TCCCAGCTCTCTCACATCCTGGCTATCTGGCCTGGGGCAAATGACTCAGTCTCTCATGAACTGTGGCACTaGACCAGTCATTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: SQLSHILAIWPGANDSVSHELWH*TSHFPF
Trigger: AAAGGGAAAATGACTGGTTCAGTGCCACAGTTCATG...AGAGACTGAGTCATTTGCCCCAGGCCAGATAGCCAGGATGTGAGAGAGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp CTTCTAAATTTGGGATGCACCCAAGTCAGAGATGGGGTCCCTCACCACTGTCTAAGGAGTATTTGGGGATaGACTGGTCCCAGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: LLNLGCTQVRDGVPHHCLRSIWG*TGPRPC
Trigger: ACAAGGCCTGGGACCAGTGCATCCCCAAATACTCCT...TAGACAGTGGTGAGGGACCCCATCTCTGACTTGGGTGCATCCCAAATTTAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp CTTCTAAATTTGGGATGCACCCAAGTCAGAGATGGGGTCCCTCACCACTGTCTACCTTCAGGACACCACTaGCTCCATCTCCCCATTAGA +
Preference number: 4 (lower is better)
Translates to: LLNLGCTQVRDGVPHHCLPSGHH*LHLPIR
Trigger: TCTAATGGGGAGATGGAGGCAGTGGTGTCCTGAAGG...TAGACAGTGGTGAGGGACCCCATCTCTGACTTGGGTGCATCCCAAATTTAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp TGTAAAGTGGGGGTTGAGTTAGACAATCCCTGTCACTCATTTGGTCCATTGCCTCGAGGTGCCCTGAGGTaGCGTCACGTAATCAGACAC +
Preference number: 4 (lower is better)
Translates to: CKVGVELDNPCHSFGPLPRGALR*RHVIRH
Trigger: GTGTCTGATTACGTGACGCCACCTCAGGGCACCTCG...AGGCAATGGACCAAATGAGTGACAGGGATTGTCTAACTCAACCCCCACTTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp CTTCTAAATTTGGGATGCACCCAAGTCAGAGATGGGGTCCCTCACCACTGTCTATATTTGGGGATGCACTaGTCCCAGGCCTTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: LLNLGCTQVRDGVPHHCLYLGMH*SQALSK
Trigger: CTTGGACAAGGCCTGGGACCAGTGCATCCCCAAATA...TAGACAGTGGTGAGGGACCCCATCTCTGACTTGGGTGCATCCCAAATTTAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp CTTCTAAATTTGGGATGCACCCAAGTCAGAGATGGGGTCCCTCACCACTGTCTACCTCCTCAAACTTCTTaGCTTTGTACTGGTCGGCCC +
Preference number: 4 (lower is better)
Translates to: LLNLGCTQVRDGVPHHCLPPQTS*LCTGRP
Trigger: GGGCCGACCAGTACAAAGCCAAGAAGTTTGAGGAGG...TAGACAGTGGTGAGGGACCCCATCTCTGACTTGGGTGCATCCCAAATTTAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp ACAATCCCTGTCACTCATTTGGTCCATTGCCTGCCAATAGTAAGTAATCAGTGTGCACTGCCTGTCTGCTaGAGCAGTCGGAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TIPVTHLVHCLPIVSNQCALPVC*SSRRPR
Trigger: TCTGGGCCTCCGACTGCTCCAGCAGACAGGCAGTGC...ACACTGATTACTTACTATTGGCAGGCAATGGACCAAATGAGTGACAGGGATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp TGTAAAGTGGGGGTTGAGTTAGACAATCCCTGTCACTCATTTGGTCCATTGCCTACCCCTTCCCTGGTTTaGGGAGAGAGCTATGGGGAG +
Preference number: 4 (lower is better)
Translates to: CKVGVELDNPCHSFGPLPTPSLV*GESYGE
Trigger: CTCCCCATAGCTCTCTCCCCAAACCAGGGAAGGGGT...AGGCAATGGACCAAATGAGTGACAGGGATTGTCTAACTCAACCCCCACTTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp TGTAAAGTGGGGGTTGAGTTAGACAATCCCTGTCACTCATTTGGTCCATTGCCTTATGCCCCACCATCCTaGGCATGGGGCTGTGGGTTA +
Preference number: 4 (lower is better)
Translates to: CKVGVELDNPCHSFGPLPYAPPS*AWGCGL
Trigger: TAACCCACAGCCCCATGCCCAGGATGGTGGGGCATA...AGGCAATGGACCAAATGAGTGACAGGGATTGTCTAACTCAACCCCCACTTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp GTCCTACATTATAATCTCTACTCTTTGGGAAGGGGATGGCTCAGGTGCTCCTGCATATGCAGTTCATGCTaGGAGAGTGCTCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: VLHYNLYSLGRGWLRCSCICSSC*ESAQGT
Trigger: TGTCCCCTGAGCACTCTCTCAGCATGAACTGCATAT...GCAGGAGCACCTGAGCCATCCCCTTCCCAAAGAGTAGAGATTATAATGTAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp GAGGATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCTTCCCTGAAGGAGATGATCAGAAGCTaGACTACTCGGTTGATGATC +
Preference number: 4 (lower is better)
Translates to: EDVWVNGSSFLFLPPSLKEMIRS*TTRLMI
Trigger: GATCATCAACCGAGTAGTTCAGCTTCTGATCATCTC...CTTCAGGGAAGGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp AAAGGGGATAGAGGATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCCACTGTTGTTGTAAATaGGGACTGCTGAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: KGDRGCLGQWIQLPVLASHCCCK*GLLNSW
Trigger: CCAGGAGTTCAGCAGTCCTCATTTACAACAACAGTG...GGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTCTATCCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp GTCCTACATTATAATCTCTACTCTTTGGGAAGGGGATGGCTCAGGTGCTCCTGCTTCATGCTGAGAGAGTaGTCAGGGGACACTCAGAAG +
Preference number: 4 (lower is better)
Translates to: VLHYNLYSLGRGWLRCSCFMLRE*SGDTQK
Trigger: CTTCTGAGTGTCCCCTGAGCACTCTCTCAGCATGAA...GCAGGAGCACCTGAGCCATCCCCTTCCCAAAGAGTAGAGATTATAATGTAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp GGTGTGGGCGATGGAGTTAGTCAGACGGACGTTCAAATCCCAGCTCTCTCACATCTTCTAAATTTGGGATaGACCCAAGTCAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: GVGDGVSQTDVQIPALSHLLNLG*TQVRDG
Trigger: CCCATCTCTGACTTGGGTGCATCCCAAATTTAGAAG...ATGTGAGAGAGCTGGGATTTGAACGTCCGTCTGACTAACTCCATCGCCCACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp GGTGTGGGCGATGGAGTTAGTCAGACGGACGTTCAAATCCCAGCTCTCTCACATAACTTAGTTCAGATATaGGGAGGACAACCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GVGDGVSQTDVQIPALSHNLVQI*GGQPQA
Trigger: AGCCTGAGGTTGTCCTCCGCATATCTGAACTAAGTT...ATGTGAGAGAGCTGGGATTTGAACGTCCGTCTGACTAACTCCATCGCCCACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp TGTAAAGTGGGGGTTGAGTTAGACAATCCCTGTCACTCATTTGGTCCATTGCCTGAGGGGTTGGAGGAATaGGGAGCCTGTCCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: CKVGVELDNPCHSFGPLPEGLEE*GACPFK
Trigger: CTTAAAGGGACAGGCTCCCCATTCCTCCAACCCCTC...AGGCAATGGACCAAATGAGTGACAGGGATTGTCTAACTCAACCCCCACTTTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp AAAGGGGATAGAGGATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCCTTGGTAGGCCCTTGTaGCCATCTGTCCTACATTAT +
Preference number: 4 (lower is better)
Translates to: KGDRGCLGQWIQLPVLASLGRPL*PSVLHY
Trigger: ATAATGTAGGACAGATGGCCACAAGGGCCTACCAAG...GGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTCTATCCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp ACAATCCCTGTCACTCATTTGGTCCATTGCCTGCCAATAGTAAGTAATCAGTGTGGGCCCAGATGTGTGTaGGTGTGGGGTCCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: TIPVTHLVHCLPIVSNQCGPRCV*VWGPRE
Trigger: TTCTCTGGGACCCCACACCCACACACATCTGGGCCC...ACACTGATTACTTACTATTGGCAGGCAATGGACCAAATGAGTGACAGGGATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp TCATTGGGCAAGGCCTTTGCAAGTACCCACCATTTGAGCCTCCTGAACTACTCCGGCACCAGGCCTTACTaGAGCATTTTCACTGTTGTT +
Preference number: 4 (lower is better)
Translates to: SLGKAFASTHHLSLLNYSGTRPY*SIFTVV
Trigger: AACAACAGTGAAAATGCTCCAGTAAGGCCTGGTGCC...GGAGTAGTTCAGGAGGCTCAAATGGTGGGTACTTGCAAAGGCCTTGCCCAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GACCTCATGATCATGCCCACTCTGACTGCCAGATGCAGATTTATCATGAAGCTACCCTGGGGCAATTTCTaGGCCTCTCACTGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: DLMIMPTLTARCRFIMKLPWGNF*ASHCRR
Trigger: TCTCCTACAGTGAGAGGCCCAGAAATTGCCCCAGGG...TAGCTTCATGATAAATCTGCATCTGGCAGTCAGAGTGGGCATGATCATGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp CTTCTAAATTTGGGATGCACCCAAGTCAGAGATGGGGTCCCTCACCACTGTCTAGAGATTCTCTGCTCTTaGTACTCTGGCTTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LLNLGCTQVRDGVPHHCLEILCS*YSGFQE
Trigger: CTCTTGGAAGCCAGAGTATCAAGAGCAGAGAATCTC...TAGACAGTGGTGAGGGACCCCATCTCTGACTTGGGTGCATCCCAAATTTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp ACAATCCCTGTCACTCATTTGGTCCATTGCCTGCCAATAGTAAGTAATCAGTGTCCACCGAGGACTCAATaGCTGTGTCCCGTACCTGGT +
Preference number: 4 (lower is better)
Translates to: TIPVTHLVHCLPIVSNQCPPRTQ*LCPVPG
Trigger: ACCAGGTACGGGACACAGCCATTGAGTCCTCGGTGG...ACACTGATTACTTACTATTGGCAGGCAATGGACCAAATGAGTGACAGGGATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GACCTCATGATCATGCCCACTCTGACTGCCAGATGCAGATTTATCATGAAGCTAAGGTCTTCATGTCCCTaGCTGTCAGGTTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: DLMIMPTLTARCRFIMKLRSSCP*LSGWEG
Trigger: TCCTTCCCAACCTGACAGCCAGGGACATGAAGACCT...TAGCTTCATGATAAATCTGCATCTGGCAGTCAGAGTGGGCATGATCATGAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GGAGAACGGAAAGTGACATGTCATATACTGCTCAGTAAAGAAGTGCTGTGGTGGAGGTCTTCATGTCCCTaGCTGTCAGGTTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GERKVTCHILLSKEVLWWRSSCP*LSGWEG
Trigger: TCCTTCCCAACCTGACAGCCAGGGACATGAAGACCT...CCACCACAGCACTTCTTTACTGAGCAGTATATGACATGTCACTTTCCGTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR CCA 90 bp TCATTGGGCAAGGCCTTTGCAAGTACCCACCATTTGAGCCTCCTGAACTACTCCTTGGGGAGAGAGCTATaGGGAGTGATGAGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: SLGKAFASTHHLSLLNYSLGREL*GVMRKN
Trigger: ATTTTTCCTCATCACTCCCCATAGCTCTCTCCCCAA...GGAGTAGTTCAGGAGGCTCAAATGGTGGGTACTTGCAAAGGCCTTGCCCAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp TGTAAAGTGGGGGTTGAGTTAGACAATCCCTGTCACTCATTTGGTCCATTGCCTCTTATTAAGACCCTATaGGGACAGGCCTGGCCAACC +
Preference number: 4 (lower is better)
Translates to: CKVGVELDNPCHSFGPLPLIKTL*GQAWPT
Trigger: GGTTGGCCAGGCCTGTCCCCATAGGGTCTTAATAAG...AGGCAATGGACCAAATGAGTGACAGGGATTGTCTAACTCAACCCCCACTTTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp AGAGATGCCCCCAAATTGTATATGCTTAGGATTCACAAAACCTGGTTCTGCCCCAGTACTTGGCAAACCTaGAGTTGTAGCCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: RDAPKLYMLRIHKTWFCPSTWQT*SCSLGT
Trigger: TGTCCCCAGGCTACAACTTCAGGTTTGCCAAGTACT...GGGGCAGAACCAGGTTTTGTGAATCCTAAGCATATACAATTTGGGGGCATCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp CTTTCTAAAGAGATGCCCCCAAATTGTATATGCTTAGGATTCACAAAACCTGGTCTCAGCAGGGAGCACTaGCTGTCTGCTGGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: LSKEMPPNCICLGFTKPGLSREH*LSAGAV
Trigger: GACTGCTCCAGCAGACAGGCAGTGCTCCCTGCTGAG...ACCAGGTTTTGTGAATCCTAAGCATATACAATTTGGGGGCATCTCTTTAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp CTTCTAAATTTGGGATGCACCCAAGTCAGAGATGGGGTCCCTCACCACTGTCTAAAATGCAAACTTTGTTaGTGGGAAAGGCATGGGGCT +
Preference number: 4 (lower is better)
Translates to: LLNLGCTQVRDGVPHHCLKCKLC*WERHGA
Trigger: AGCCCCATGCCTTTCCCAGCAACAAAGTTTGCATTT...TAGACAGTGGTGAGGGACCCCATCTCTGACTTGGGTGCATCCCAAATTTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp GCCAGATGCAGATTTATCATGAAGCTATTGAAACATTCTTTAGGCTCATTCACTTCTGCCCCAGAGCCCTaGCCTGGGGCAATTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ARCRFIMKLLKHSLGSFTSAPEP*PGAISG
Trigger: CCCAGAAATTGCCCCAGGGCAGGGCTCTGGGGCAGA...AGTGAATGAGCCTAAAGAATGTTTCAATAGCTTCATGATAAATCTGCATCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp GAAGCAGCAGGGCTGATGGACCCTGGGAGTTCATTCTTCTCTCATGGGGTGTGGTTCTTTCTAAAGAGATaGCCCCAAATTGTATATGCT +
Preference number: 4 (lower is better)
Translates to: EAAGLMDPGSSFFSHGVWFFLKR*PQIVYA
Trigger: AGCATATACAATTTGGGGGCATCTCTTTAGAAAGAA...CCACACCCCATGAGAGAAGAATGAACTCCCAGGGTCCATCAGCCCTGCTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp TGTAAAGTGGGGGTTGAGTTAGACAATCCCTGTCACTCATTTGGTCCATTGCCTAGGGCTGATGGACCCTaGGAGTTCATTCTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: CKVGVELDNPCHSFGPLPRADGP*EFILLS
Trigger: TGAGAGAAGAATGAACTCCCAGGGTCCATCAGCCCT...AGGCAATGGACCAAATGAGTGACAGGGATTGTCTAACTCAACCCCCACTTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GAGGATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCTTCCCTGAAGTCTAACCTTAGAAAATaGGGCACCTTATTAAGACCC +
Preference number: 4 (lower is better)
Translates to: EDVWVNGSSFLFLPPSLKSNLRK*GTLLRP
Trigger: GGGTCTTAATAAGGTGCCCCATTTTCTAAGGTTAGA...CTTCAGGGAAGGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp TTCTTTTTCTATCAAATAGGATTAATGACAAACCATAGCGGACTCACCAGCGTTCCCAGAGCCCTGCCCTaGGGCAATTTCTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: FFFYQIGLMTNHSGLTSVPRALP*GNFWAS
Trigger: AGAGGCCCAGAAATTGCCCCAGGGCAGGGCTCTGGG...AACGCTGGTGAGTCCGCTATGGTTTGTCATTAATCCTATTTGATAGAAAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GACCTCATGATCATGCCCACTCTGACTGCCAGATGCAGATTTATCATGAAGCTAGTGTTGAGCTTTATGTaGGGTGGGTCTTACCCCTTC +
Preference number: 4 (lower is better)
Translates to: DLMIMPTLTARCRFIMKLVLSFM*GGSYPF
Trigger: GAAGGGGTAAGACCCACCCCACATAAAGCTCAACAC...TAGCTTCATGATAAATCTGCATCTGGCAGTCAGAGTGGGCATGATCATGAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GACCTCATGATCATGCCCACTCTGACTGCCAGATGCAGATTTATCATGAAGCTATGGAGAAGCATAGTCTaGTCAGATCTCCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: DLMIMPTLTARCRFIMKLWRSIV*SDLQAL
Trigger: CAGTGCCTGGAGATCTGACCAGACTATGCTTCTCCA...TAGCTTCATGATAAATCTGCATCTGGCAGTCAGAGTGGGCATGATCATGAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp GCCAGATGCAGATTTATCATGAAGCTATTGAAACATTCTTTAGGCTCATTCACTCAGCCTCCCAAGAGCTaGATTCCCCAGGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: ARCRFIMKLLKHSLGSFTQPPKS*IPQGCL
Trigger: CAGGCATCCCTGGGGAATTCAGCTCTTGGGAGGCTG...AGTGAATGAGCCTAAAGAATGTTTCAATAGCTTCATGATAAATCTGCATCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp AGAGATGCCCCCAAATTGTATATGCTTAGGATTCACAAAACCTGGTTCTGCCCCGGGTGCGGTACTCACTaGCATTTTCCATTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: RDAPKLYMLRIHKTWFCPGCGTH*HFPFCS
Trigger: ACTACAAAATGGAAAATGGCAGTGAGTACCGCACCC...GGGGCAGAACCAGGTTTTGTGAATCCTAAGCATATACAATTTGGGGGCATCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp AGAGATGCCCCCAAATTGTATATGCTTAGGATTCACAAAACCTGGTTCTGCCCCTTTCTGGCCTCAGTTTaGTCATCTGTAAGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: RDAPKLYMLRIHKTWFCPFLASV*SSVSKR
Trigger: CCTCTTGCTTACAGATGAGCAAACTGAGGCCAGAAA...GGGGCAGAACCAGGTTTTGTGAATCCTAAGCATATACAATTTGGGGGCATCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp CTTTCTAAAGAGATGCCCCCAAATTGTATATGCTTAGGATTCACAAAACCTGGTGTCCTAGGAAGCAGATaGGGCCAGGCAAGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: LSKEMPPNCICLGFTKPGVLGSR*GQARSE
Trigger: TTCACTCCTTGCCTGGCCCCATCTGCTTCCTAGGAC...ACCAGGTTTTGTGAATCCTAAGCATATACAATTTGGGGGCATCTCTTTAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp TGTAAAGTGGGGGTTGAGTTAGACAATCCCTGTCACTCATTTGGTCCATTGCCTATAATCTCTACTCTTTaGGAAGGGGATGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: CKVGVELDNPCHSFGPLPIISTL*EGDGSG
Trigger: ACCTGAGCCATCCCCTTCCCAAAGAGTAGAGATTAT...AGGCAATGGACCAAATGAGTGACAGGGATTGTCTAACTCAACCCCCACTTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp TTCTTTTTCTATCAAATAGGATTAATGACAAACCATAGCGGACTCACCAGCGTTGGACTGCTGAACTCCTaGAACAGGGTCCCAGCCTAC +
Preference number: 4 (lower is better)
Translates to: FFFYQIGLMTNHSGLTSVGLLNS*NRVPAY
Trigger: GTAGGCTGGGACCCTGTTCCAGGAGTTCAGCAGTCC...AACGCTGGTGAGTCCGCTATGGTTTGTCATTAATCCTATTTGATAGAAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp TTCTTTTTCTATCAAATAGGATTAATGACAAACCATAGCGGACTCACCAGCGTTCCCGCACTGGCTGTCTaGTACACAGCGGTATTTCTC +
Preference number: 4 (lower is better)
Translates to: FFFYQIGLMTNHSGLTSVPALAV*YTAVFL
Trigger: GAGAAATACCGCTGTGTATCAGACAGCCAGTGCGGG...AACGCTGGTGAGTCCGCTATGGTTTGTCATTAATCCTATTTGATAGAAAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp TGTAAAGTGGGGGTTGAGTTAGACAATCCCTGTCACTCATTTGGTCCATTGCCTTGTCCCTTTAAGCCATaGAATCCTAGTGAGATTCTC +
Preference number: 4 (lower is better)
Translates to: CKVGVELDNPCHSFGPLPCPFKP*NPSEIL
Trigger: GAGAATCTCACTAGGATTGCATGGCTTAAAGGGACA...AGGCAATGGACCAAATGAGTGACAGGGATTGTCTAACTCAACCCCCACTTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp GCCAGATGCAGATTTATCATGAAGCTATTGAAACATTCTTTAGGCTCATTCACTCAGATCTCCAGGCACTaGCCAATTCCCAAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: ARCRFIMKLLKHSLGSFTQISRH*PIPKAD
Trigger: GTCAGCCTTGGGAATTGGGCAGTGCCTGGAGATCTG...AGTGAATGAGCCTAAAGAATGTTTCAATAGCTTCATGATAAATCTGCATCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CCA 90 bp GCCAGATGCAGATTTATCATGAAGCTATTGAAACATTCTTTAGGCTCATTCACTGAGCTTTATGTGGGGTaGGTCTTACCCCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: ARCRFIMKLLKHSLGSFTELYVG*VLPLLP
Trigger: GGGGAGAAGGGGTAAGACCCACCCCACATAAAGCTC...AGTGAATGAGCCTAAAGAATGTTTCAATAGCTTCATGATAAATCTGCATCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp CTTTCTAAAGAGATGCCCCCAAATTGTATATGCTTAGGATTCACAAAACCTGGTTTCCCTTCTCAAAGTTaGAGAGGGGGAAACGGATGC +
Preference number: 4 (lower is better)
Translates to: LSKEMPPNCICLGFTKPGFPSQS*RGGNGC
Trigger: GCATCCGTTTCCCCCTCTTCAACTTTGAGAAGGGAA...ACCAGGTTTTGTGAATCCTAAGCATATACAATTTGGGGGCATCTCTTTAGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp GACCTCATGATCATGCCCACTCTGACTGCCAGATGCAGATTTATCATGAAGCTACAGAATCCTTGCATCTaGTTTTCAGTAACAATCATC +
Preference number: 4 (lower is better)
Translates to: DLMIMPTLTARCRFIMKLQNPCI*FSVTII
Trigger: GATGATTGTTACTGAAAATCAGATGCAAGGATTCTG...TAGCTTCATGATAAATCTGCATCTGGCAGTCAGAGTGGGCATGATCATGAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp GCCAGATGCAGATTTATCATGAAGCTATTGAAACATTCTTTAGGCTCATTCACTAGTTTGGCAAAATCCTaGCCCGCAAACTTGACCACG +
Preference number: 4 (lower is better)
Translates to: ARCRFIMKLLKHSLGSFTSLAKS*PANLTT
Trigger: CGTGGTCAAGTTTGCGGGGCAGGATTTTGCCAAACT...AGTGAATGAGCCTAAAGAATGTTTCAATAGCTTCATGATAAATCTGCATCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp TGTAAAGTGGGGGTTGAGTTAGACAATCCCTGTCACTCATTTGGTCCATTGCCTACTCATTTGGTCCATTaGCTGCCAATAGTAAGTAAT +
Preference number: 4 (lower is better)
Translates to: CKVGVELDNPCHSFGPLPTHLVH*LPIVSN
Trigger: ATTACTTACTATTGGCAGGCAATGGACCAAATGAGT...AGGCAATGGACCAAATGAGTGACAGGGATTGTCTAACTCAACCCCCACTTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp GCCAGATGCAGATTTATCATGAAGCTATTGAAACATTCTTTAGGCTCATTCACTTGGTGGTCTCATAGGTaGAGAAGTCGGATATGCAGT +
Preference number: 4 (lower is better)
Translates to: ARCRFIMKLLKHSLGSFTWWSHR*RSRICS
Trigger: ACTGCATATCCGACTTCTTCACCTATGAGACCACCA...AGTGAATGAGCCTAAAGAATGTTTCAATAGCTTCATGATAAATCTGCATCTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR TCA 90 bp TTCTTTTTCTATCAAATAGGATTAATGACAAACCATAGCGGACTCACCAGCGTTAATCAGACACATCCATaGCTCTGTTGGCGTAGAGTC +
Preference number: 4 (lower is better)
Translates to: FFFYQIGLMTNHSGLTSVNQTHP*LCWRRV
Trigger: GACTCTACGCCAACAGAGTCATGGATGTGTCTGATT...AACGCTGGTGAGTCCGCTATGGTTTGTCATTAATCCTATTTGATAGAAAAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR GCA 90 bp GCCAGATGCAGATTTATCATGAAGCTATTGAAACATTCTTTAGGCTCATTCACTATTGGGCAAGGCCTTTaGAAGTACCCACCATTTGAG +
Preference number: 4 (lower is better)
Translates to: ARCRFIMKLLKHSLGSFTIGQGL*KYPPFE
Trigger: CTCAAATGGTGGGTACTTGCAAAGGCCTTGCCCAAT...AGTGAATGAGCCTAAAGAATGTTTCAATAGCTTCATGATAAATCTGCATCTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
3UTR CAA 72 bp CATGAAGCTATTGAAACATTCTTTAGGCTCATTCACTaGCATGAGCCCCTTCTAATACCTAATTTTGTATTC +
Preference number: 4 (lower is better)
Translates to: HEAIETFFRLIH*HEPLLIPNFVF
Trigger: GAATACAAAATTAGGTATTAGAAGGGGCTCATGCAAGTGAATGAGCCTAAAGAATGTTTCAATAGCTTCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp GGGCAGAAAGGGTCCTTGTCCGGGTGGAAGCGGCAGGTCTTCATGTCCCTGGCTGGGCAGAAAGGGTCCTaGTCCGGGTGGAAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: GQKGSLSGWKRQVFMSLAGQKGS*SGWKRQ
Trigger: CTGCCGCTTCCACCCGGACAAGGACCCTTTCTGCCC...AGCCAGGGACATGAAGACCTGCCGCTTCCACCCGGACAAGGACCCTTTCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR CAA 90 bp TGGGGCAGAAAGGGTCCTTGTCCGGGTGGAAGCGGCAGGTCTTCATGTCCCTGGTCCTGCCCCGCAAACTaGACCACGTCCCCTACCCGC +
Preference number: 5 (lower is better)
Translates to: WGRKGPCPGGSGRSSCPWSCPAN*TTSPTR
Trigger: GCGGGTAGGGGACGTGGTCAAGTTTGCGGGGCAGGA...CCAGGGACATGAAGACCTGCCGCTTCCACCCGGACAAGGACCCTTTCTGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR CAA 90 bp CTCAGCAGGGAGCACTGCCTGTCTGCTGGAGCAGTCGGAGGCCCAGACACTTGGTTCCTGTGCCGTGTGTaGAGGGGCCGCCCTCCATCT +
Preference number: 5 (lower is better)
Translates to: LSREHCLSAGAVGGPDTWFLCRV*RGRPPS
Trigger: AGATGGAGGGCGGCCCCTCAACACACGGCACAGGAA...CCAAGTGTCTGGGCCTCCGACTGCTCCAGCAGACAGGCAGTGCTCCCTGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS GCA 90 bp GCCTTCCGCTGTAAGCCCCAGGAGGGCGAGGACCCTGTCTGCTTTTaGCCACCATTCCGTCCTCAATCCACAGTGCCTGGCATGCAGAGA +
Preference number: 5 (lower is better)
Translates to: AFRCKPQEGEDPVCF*PPFRPQSTVPGMQR
Trigger: TCTCTGCATGCCAGGCACTGTGGATTGAGGACGGAATGGTGGGCAAAAGCAGACAGGGTCCTCGCCCTCCTGGGGCTTACAGCGGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533436.1
CDS CCA 90 bp GGCCTATGGAGAAGGCCCCCGAATCGGTGGACTGCTTCTCCGCTGTaGTCTGGTCGCTGGGGTACACTGGGTTGGTCAAAGCCGCGATTT +
Preference number: 5 (lower is better)
Translates to: GLWRRPPNRWTASPL*SGRWGTLGWSKPRF
Trigger: AAATCGCGGCTTTGACCAACCCAGTGTACCCCAGCGACCAGACCACAGCGGAGAAGCAGTCCACCGATTCGGGGGCCTTCTCCATAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS CCA 90 bp AGCCTTTGTGAGTGTGGGGCCCTGGAAAGAGGCCCTAGTGGCCTATaGAGAAGGCCCCCGAATCGGTGGACTGCTTCTCCGCTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: SLCECGALERGPSGL*RRPPNRWTASPLWS
Trigger: AGACCACAGCGGAGAAGCAGTCCACCGATTCGGGGGCCTTCTCCATAGGCCACTAGGGCCTCTTTCCAGGGCCCCACACTCACAAAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS-3UTR CAA 90 bp TGGGGCAGAAAGGGTCCTTGTCCGGGTGGAAGCGGCAGGTCTTCATGTCCCTGGTCCCTGGCTGTCAGGTaGGGAAGGAGGTTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: WGRKGPCPGGSGRSSCPWSLAVR*GRRFPF
Trigger: GAAGGGAAACCTCCTTCCCAACCTGACAGCCAGGGA...CCAGGGACATGAAGACCTGCCGCTTCCACCCGGACAAGGACCCTTTCTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR CAA 90 bp GATGGGCCCTCCTCAAGCTCAGAGACGCACGGCTCCCACATGGGCAAAGGGGAGCTCCTCCTGTCTGGCTaGGAGCCTTACGTTTCCACT +
Preference number: 5 (lower is better)
Translates to: DGPSSSSETHGSHMGKGELLLSG*EPYVST
Trigger: AGTGGAAACGTAAGGCTCCAAGCCAGACAGGAGGAG...CTCCCCTTTGCCCATGTGGGAGCCGTGCGTCTCTGAGCTTGAGGAGGGCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR CAA 90 bp AGCTTCCATCATGATGGGCCCTCCTCAAGCTCAGAGACGCACGGCTCCCACATGCTCGTGCGCGCCAGTTaGGCAAAATCCTGCCCCGCA +
Preference number: 5 (lower is better)
Translates to: SFHHDGPSSSSETHGSHMLVRAS*AKSCPA
Trigger: TGCGGGGCAGGATTTTGCCAAACTGGCGCGCACGAG...CATGTGGGAGCCGTGCGTCTCTGAGCTTGAGGAGGGCCCATCATGATGGAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS GCA 90 bp TCTCTTGCCTTCCGCTGTAAGCCCCAGGAGGGCGAGGACCCTGTCTaGTTTTGCCCACCATTCCGTCCTCAATCCACAGTGCCTGGCATG +
Preference number: 5 (lower is better)
Translates to: SLAFRCKPQEGEDPV*FCPPFRPQSTVPGM
Trigger: CATGCCAGGCACTGTGGATTGAGGACGGAATGGTGGGCAAAAGCAGACAGGGTCCTCGCCCTCCTGGGGCTTACAGCGGAAGGCAAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533436.1
CDS-3UTR CAA 90 bp GGTGTGGGCGATGGAGTTAGTCAGACGGACGTTCAAATCCCAGCTCTCTCACATGGGCAGAAAGGGTCCTaGTCCGGGTGGAAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: GVGDGVSQTDVQIPALSHGQKGS*SGWKRQ
Trigger: CTGCCGCTTCCACCCGGACAAGGACCCTTTCTGCCC...ATGTGAGAGAGCTGGGATTTGAACGTCCGTCTGACTAACTCCATCGCCCACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp CCTACGACAGGATCCCAGGTCCGGGAATCAAATCCCCAGAGTGAGGGGGCCCAGATGGTGGGGATGATGTaGAACTTGCCAGCATTCCCG +
Preference number: 5 (lower is better)
Translates to: PTTGSQVRESNPQSEGAQMVGMM*NLPAFP
Trigger: CGGGAATGCTGGCAAGTTCAACATCATCCCCACCAT...CTGGGCCCCCTCACTCTGGGGATTTGATTCCCGGACCTGGGATCCTGTCGTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp AGTCTGGTCAGATCTCCAGGCACTGCCCAATTCCCAAGGCTGACCCTGGGGAGAGTGAGGGAAGGGGTGTaGAGCTTTATGTGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: SLVRSPGTAQFPRLTLGRVREGV*SFMWGG
Trigger: CCCACCCCACATAAAGCTCAACACCCCTTCCCTCAC...TCTCCCCAGGGTCAGCCTTGGGAATTGGGCAGTGCCTGGAGATCTGACCAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp GATGGGCCCTCCTCAAGCTCAGAGACGCACGGCTCCCACATGGGCAAAGGGGAGTTTCCCTTCTCAAAGTaGAAGAGGGGGAAACGGATG +
Preference number: 5 (lower is better)
Translates to: DGPSSSSETHGSHMGKGEFPFSK*KRGKRM
Trigger: CATCCGTTTCCCCCTCTTCAACTTTGAGAAGGGAAA...CTCCCCTTTGCCCATGTGGGAGCCGTGCGTCTCTGAGCTTGAGGAGGGCCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534820.1
CDS-3UTR CAA 90 bp GAAGCAGCAGGGCTGATGGACCCTGGGAGTTCATTCTTCTCTCATGGGGTGTGGCGGGTGAAGGAGTATTaGGGGATGCACTGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: EAAGLMDPGSSFFSHGVWRVKEY*GMHWSQ
Trigger: CTGGGACCAGTGCATCCCCAAATACTCCTTCACCCG...CCACACCCCATGAGAGAAGAATGAACTCCCAGGGTCCATCAGCCCTGCTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS TCA 90 bp AGACCGAGGTGCCCTGAGGTGGCGTCACGTAATCAGACACATCCATaGCTCTGTTGGCGTAGAGTCCGGAGCCCTTCACCTTGGTTACCA +
Preference number: 5 (lower is better)
Translates to: RPRCPEVASRNQTHP*LCWRRVRSPSPWLP
Trigger: TGGTAACCAAGGTGAAGGGCTCCGGACTCTACGCCAACAGAGTCATGGATGTGTCTGATTACGTGACGCCACCTCAGGGCACCTCGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS CCA 90 bp ATCGGTGGACTGCTTCTCCGCTGTGGTCTGGTCGCTGGGGTACACTaGGTTGGTCAAAGCCGCGATTTTCAGCGTAGTCTCATTCACCTC +
Preference number: 5 (lower is better)
Translates to: IGGLLLRCGLVAGVH*VGQSRDFQRSLIHL
Trigger: GAGGTGAATGAGACTACGCTGAAAATCGCGGCTTTGACCAACCCAGTGTACCCCAGCGACCAGACCACAGCGGAGAAGCAGTCCACCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS-3UTR CAA 90 bp AGTCTGGTCAGATCTCCAGGCACTGCCCAATTCCCAAGGCTGACCCTGGGGAGATCAAACTTCTTGGCTTaGTACTGGTCGGCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: SLVRSPGTAQFPRLTLGRSNFLA*YWSAPL
Trigger: CAAGGGGGCCGACCAGTACAAAGCCAAGAAGTTTGA...TCTCCCCAGGGTCAGCCTTGGGAATTGGGCAGTGCCTGGAGATCTGACCAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS CCA 90 bp ACGAGATCACGACCTGGAGGGGGCAGCTTAGAGGGGTTGGAGGAATaGGGAGCCTGTCCCTTTAAGCCATGCAATCCTAGTGAGATTCTC +
Preference number: 5 (lower is better)
Translates to: TRSRPGGGSLEGLEE*GACPFKPCNPSEIL
Trigger: GAGAATCTCACTAGGATTGCATGGCTTAAAGGGACAGGCTCCCCATTCCTCCAACCCCTCTAAGCTGCCCCCTCCAGGTCGTGATCTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000533436.1
CDS-3UTR CAA 90 bp GAAGCAGCAGGGCTGATGGACCCTGGGAGTTCATTCTTCTCTCATGGGGTGTGGACCTCCTCAAACTTCTaGGCTTTGTACTGGTCGGCC +
Preference number: 5 (lower is better)
Translates to: EAAGLMDPGSSFFSHGVWTSSNF*ALYWSA
Trigger: GGCCGACCAGTACAAAGCCAAGAAGTTTGAGGAGGT...CCACACCCCATGAGAGAAGAATGAACTCCCAGGGTCCATCAGCCCTGCTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp TGCCTGGGGGAGTCCCAGGTGGAGAATGTGGTGCTGCCTTCACTGATGTCTCTGCATGTGGGTTCCTTTTaGGCCATGAACTGTGGCACT +
Preference number: 5 (lower is better)
Translates to: CLGESQVENVVLPSLMSLHVGSF*AMNCGT
Trigger: AGTGCCACAGTTCATGGCCAAAAAGGAACCCACATG...CAGAGACATCAGTGAAGGCAGCACCACATTCTCCACCTGGGACTCCCCCAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp AGTCTGGTCAGATCTCCAGGCACTGCCCAATTCCCAAGGCTGACCCTGGGGAGATTTCCCTTCTCAAAGTaGAAGAGGGGGAAACGGATG +
Preference number: 5 (lower is better)
Translates to: SLVRSPGTAQFPRLTLGRFPFSK*KRGKRM
Trigger: CATCCGTTTCCCCCTCTTCAACTTTGAGAAGGGAAA...TCTCCCCAGGGTCAGCCTTGGGAATTGGGCAGTGCCTGGAGATCTGACCAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp AAAGGGGATAGAGGATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCTCCCTGGCTGTCAGGTaGGGAAGGAGGTTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: KGDRGCLGQWIQLPVLASSLAVR*GRRFPF
Trigger: GAAGGGAAACCTCCTTCCCAACCTGACAGCCAGGGA...GGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTCTATCCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp GACCTCATGATCATGCCCACTCTGACTGCCAGATGCAGATTTATCATGAAGCTACCCGTGCGCGCCAGTTaGGCAAAATCCTGCCCCGCA +
Preference number: 5 (lower is better)
Translates to: DLMIMPTLTARCRFIMKLPVRAS*AKSCPA
Trigger: TGCGGGGCAGGATTTTGCCAAACTGGCGCGCACGGG...TAGCTTCATGATAAATCTGCATCTGGCAGTCAGAGTGGGCATGATCATGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp AGTCTGGTCAGATCTCCAGGCACTGCCCAATTCCCAAGGCTGACCCTGGGGAGACCTAAAATGCAAACTTaGTTGCTGGGAAAGGCATGG +
Preference number: 5 (lower is better)
Translates to: SLVRSPGTAQFPRLTLGRPKMQT*LLGKAW
Trigger: CCATGCCTTTCCCAGCAACAAAGTTTGCATTTTAGG...TCTCCCCAGGGTCAGCCTTGGGAATTGGGCAGTGCCTGGAGATCTGACCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp ACAATCCCTGTCACTCATTTGGTCCATTGCCTGCCAATAGTAAGTAATCAGTGTTCCTGCCCCGCAAACTaGACCACGTCCCCTACCCGC +
Preference number: 5 (lower is better)
Translates to: TIPVTHLVHCLPIVSNQCSCPAN*TTSPTR
Trigger: GCGGGTAGGGGACGTGGTCAAGTTTGCGGGGCAGGA...ACACTGATTACTTACTATTGGCAGGCAATGGACCAAATGAGTGACAGGGATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp CTTCTAAATTTGGGATGCACCCAAGTCAGAGATGGGGTCCCTCACCACTGTCTAGCCCCCTTGAGGAAGTaGAGCAGGATGATGTCACAG +
Preference number: 5 (lower is better)
Translates to: LLNLGCTQVRDGVPHHCLAPLRK*SRMMSQ
Trigger: CTGTGACATCATCCTGCTCAACTTCCTCAAGGGGGC...TAGACAGTGGTGAGGGACCCCATCTCTGACTTGGGTGCATCCCAAATTTAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp GTCCTACATTATAATCTCTACTCTTTGGGAAGGGGATGGCTCAGGTGCTCCTGCGCACTTGGTAGGCCCTaGTGGCCATCTGTCCTACAT +
Preference number: 5 (lower is better)
Translates to: VLHYNLYSLGRGWLRCSCALGRP*WPSVLH
Trigger: ATGTAGGACAGATGGCCACAAGGGCCTACCAAGTGC...GCAGGAGCACCTGAGCCATCCCCTTCCCAAAGAGTAGAGATTATAATGTAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp TGTAAAGTGGGGGTTGAGTTAGACAATCCCTGTCACTCATTTGGTCCATTGCCTGGAGTGAAGGTGAGATaGGGGTCTCAGCAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: CKVGVELDNPCHSFGPLPGVKVR*GSQQGA
Trigger: TGCTCCCTGCTGAGACCCCAATCTCACCTTCACTCC...AGGCAATGGACCAAATGAGTGACAGGGATTGTCTAACTCAACCCCCACTTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp GTCCTACATTATAATCTCTACTCTTTGGGAAGGGGATGGCTCAGGTGCTCCTGCGCAAGTACCCACCATTaGAGCCTCCTGAACTACTCC +
Preference number: 5 (lower is better)
Translates to: VLHYNLYSLGRGWLRCSCASTHH*SLLNYS
Trigger: GGAGTAGTTCAGGAGGCTCAAATGGTGGGTACTTGC...GCAGGAGCACCTGAGCCATCCCCTTCCCAAAGAGTAGAGATTATAATGTAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp GAGGATGTCTGGGTCAATGGATCCAGCTTCCTGTTCTTGCCTCCTTCCCTGAAGCTCTGGGCAGAATCCTaGCATCTGATTTTCAGTAAC +
Preference number: 5 (lower is better)
Translates to: EDVWVNGSSFLFLPPSLKLWAES*HLIFSN
Trigger: GTTACTGAAAATCAGATGCAAGGATTCTGCCCAGAG...CTTCAGGGAAGGAGGCAAGAACAGGAAGCTGGATCCATTGACCCAGACATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp TGTAAAGTGGGGGTTGAGTTAGACAATCCCTGTCACTCATTTGGTCCATTGCCTCTGGGGTACACTGGGTaGGTCAAAGCCGCGATTTTC +
Preference number: 5 (lower is better)
Translates to: CKVGVELDNPCHSFGPLPLGYTG*VKAAIF
Trigger: GAAAATCGCGGCTTTGACCAACCCAGTGTACCCCAG...AGGCAATGGACCAAATGAGTGACAGGGATTGTCTAACTCAACCCCCACTTTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp TTCTTTTTCTATCAAATAGGATTAATGACAAACCATAGCGGACTCACCAGCGTTGGCAGCTTAGAGGGGTaGGAGGAATGGGGAGCCTGT +
Preference number: 5 (lower is better)
Translates to: FFFYQIGLMTNHSGLTSVGSLEG*EEWGAC
Trigger: ACAGGCTCCCCATTCCTCCAACCCCTCTAAGCTGCC...AACGCTGGTGAGTCCGCTATGGTTTGTCATTAATCCTATTTGATAGAAAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp GCCAGATGCAGATTTATCATGAAGCTATTGAAACATTCTTTAGGCTCATTCACTCCGGAGCCCTTCACCTaGGTTACCACCGAGGACTCA +
Preference number: 5 (lower is better)
Translates to: ARCRFIMKLLKHSLGSFTPEPFT*VTTEDS
Trigger: TGAGTCCTCGGTGGTAACCAAGGTGAAGGGCTCCGG...AGTGAATGAGCCTAAAGAATGTTTCAATAGCTTCATGATAAATCTGCATCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp CTTTCTAAAGAGATGCCCCCAAATTGTATATGCTTAGGATTCACAAAACCTGGTTACTGGTCGGCCCCCTaGAGGAAGTTGAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: LSKEMPPNCICLGFTKPGYWSAP*RKLSRM
Trigger: CATCCTGCTCAACTTCCTCAAGGGGGCCGACCAGTA...ACCAGGTTTTGTGAATCCTAAGCATATACAATTTGGGGGCATCTCTTTAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp TGTAAAGTGGGGGTTGAGTTAGACAATCCCTGTCACTCATTTGGTCCATTGCCTAAAATGCAAACTTTGTaGCTGGGAAAGGCATGGGGC +
Preference number: 5 (lower is better)
Translates to: CKVGVELDNPCHSFGPLPKMQTL*LGKAWG
Trigger: GCCCCATGCCTTTCCCAGCAACAAAGTTTGCATTTT...AGGCAATGGACCAAATGAGTGACAGGGATTGTCTAACTCAACCCCCACTTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp ACAATCCCTGTCACTCATTTGGTCCATTGCCTGCCAATAGTAAGTAATCAGTGTGGGATGATGTTGAACTaGCCAGCATTCCCGTATACC +
Preference number: 5 (lower is better)
Translates to: TIPVTHLVHCLPIVSNQCGMMLN*PAFPYT
Trigger: GGTATACGGGAATGCTGGCAAGTTCAACATCATCCC...ACACTGATTACTTACTATTGGCAGGCAATGGACCAAATGAGTGACAGGGATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp GCCAGATGCAGATTTATCATGAAGCTATTGAAACATTCTTTAGGCTCATTCACTTCCAGCTTCCTGTTCTaGCCTCCTTCCCTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: ARCRFIMKLLKHSLGSFTSSFLF*PPSLKG
Trigger: GCCCTTCAGGGAAGGAGGCAAGAACAGGAAGCTGGA...AGTGAATGAGCCTAAAGAATGTTTCAATAGCTTCATGATAAATCTGCATCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp CTTCTAAATTTGGGATGCACCCAAGTCAGAGATGGGGTCCCTCACCACTGTCTAGTCCATGTGATTATGTaGGTGATTGTGCTGAGTAAA +
Preference number: 5 (lower is better)
Translates to: LLNLGCTQVRDGVPHHCLVHVIM*VIVLSK
Trigger: TTTACTCAGCACAATCACCAACATAATCACATGGAC...TAGACAGTGGTGAGGGACCCCATCTCTGACTTGGGTGCATCCCAAATTTAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp AGAGATGCCCCCAAATTGTATATGCTTAGGATTCACAAAACCTGGTTCTGCCCCTGTTTCCTTCTAAATTaGGGATGCACCCAAGTCAGA +
Preference number: 5 (lower is better)
Translates to: RDAPKLYMLRIHKTWFCPCFLLN*GCTQVR
Trigger: TCTGACTTGGGTGCATCCCAAATTTAGAAGGAAACA...GGGGCAGAACCAGGTTTTGTGAATCCTAAGCATATACAATTTGGGGGCATCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS-3UTR CAA 90 bp TTCTTTTTCTATCAAATAGGATTAATGACAAACCATAGCGGACTCACCAGCGTTTATAATCTCTACTCTTaGGGAAGGGGATGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: FFFYQIGLMTNHSGLTSVYNLYS*GRGWLR
Trigger: CCTGAGCCATCCCCTTCCCAAAGAGTAGAGATTATA...AACGCTGGTGAGTCCGCTATGGTTTGTCATTAATCCTATTTGATAGAAAAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS CCA 72 bp GAGTGCTCAGGGGACACTCAGAAGGGGGCCCAGTGGTaGCCTCAGGAGAGGGAGGTCCTACAGGACAGGGAG +
Preference number: 6 (lower is better)
Translates to: ECSGDTQKGAQW*PQEREVLQDRE
Trigger: CTCCCTGTCCTGTAGGACCTCCCTCTCCTGAGGCCACCACTGGGCCCCCTTCTGAGTGTCCCCTGAGCACTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000533436.1
CDS CCA 72 bp GCCCCCGAATCGGTGGACTGCTTCTCCGCTGTGGTCTaGTCGCTGGGGTACACTGGGTTGGTCAAAGCCGCG +
Preference number: 6 (lower is better)
Translates to: APESVDCFSAVV*SLGYTGLVKAA
Trigger: CGCGGCTTTGACCAACCCAGTGTACCCCAGCGACCAGACCACAGCGGAGAAGCAGTCCACCGATTCGGGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS CCA 72 bp GGCCCTAGTGGCCTATGGAGAAGGCCCCCGAATCGGTaGACTGCTTCTCCGCTGTGGTCTGGTCGCTGGGGT +
Preference number: 6 (lower is better)
Translates to: GPSGLWRRPPNR*TASPLWSGRWG
Trigger: ACCCCAGCGACCAGACCACAGCGGAGAAGCAGTCCACCGATTCGGGGGCCTTCTCCATAGGCCACTAGGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS CCA 72 bp GAGTGTGGGGCCCTGGAAAGAGGCCCTAGTGGCCTATaGAGAAGGCCCCCGAATCGGTGGACTGCTTCTCCG +
Preference number: 6 (lower is better)
Translates to: ECGALERGPSGL*RRPPNRWTASP
Trigger: CGGAGAAGCAGTCCACCGATTCGGGGGCCTTCTCCATAGGCCACTAGGGCCTCTTTCCAGGGCCCCACACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS CCA 72 bp GGAGGTCCTACAGGACAGGGAGACGAGATCACGACCTaGAGGGGGCAGCTTAGAGGGGTTGGAGGAATGGGG +
Preference number: 6 (lower is better)
Translates to: GGPTGQGDEITT*RGQLRGVGGMG
Trigger: CCCCATTCCTCCAACCCCTCTAAGCTGCCCCCTCCAGGTCGTGATCTCGTCTCCCTGTCCTGTAGGACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000533436.1
CDS CCA 72 bp CTGTCGAGCCGGGTGAAGGAGTATTTGGGGATGCACTaGTCCCAGGCCTTGTCCAAGTCGCACACCCAGCCG +
Preference number: 6 (lower is better)
Translates to: LSSRVKEYLGMH*SQALSKSHTQP
Trigger: CGGCTGGGTGTGCGACTTGGACAAGGCCTGGGACCAGTGCATCCCCAAATACTCCTTCACCCGGCTCGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS TCA 72 bp CCCACCTGGCAAGCGCTCAGGCCCGCACTGGCTGTCTaGTACACAGCGGTATTTCTCCTCACTCTCTGGGCA +
Preference number: 6 (lower is better)
Translates to: PTWQALRPALAV*YTAVFLLTLWA
Trigger: TGCCCAGAGAGTGAGGAGAAATACCGCTGTGTATCAGACAGCCAGTGCGGGCCTGAGCGCTTGCCAGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS GCA 72 bp TGTAAGCCCCAGGAGGGCGAGGACCCTGTCTGCTTTTaGCCACCATTCCGTCCTCAATCCACAGTGCCTGGC +
Preference number: 6 (lower is better)
Translates to: CKPQEGEDPVCF*PPFRPQSTVPG
Trigger: GCCAGGCACTGTGGATTGAGGACGGAATGGTGGGCAAAAGCAGACAGGGTCCTCGCCCTCCTGGGGCTTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533436.1
CDS CCA 72 bp AGAAGGCCCCCGAATCGGTGGACTGCTTCTCCGCTGTaGTCTGGTCGCTGGGGTACACTGGGTTGGTCAAAG +
Preference number: 6 (lower is better)
Translates to: RRPPNRWTASPL*SGRWGTLGWSK
Trigger: CTTTGACCAACCCAGTGTACCCCAGCGACCAGACCACAGCGGAGAAGCAGTCCACCGATTCGGGGGCCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS CAA 90 bp TCGAGCCGGGTGAAGGAGTATTTGGGGATGCACTGGTCCCAGGCCTaGTCCAAGTCGCACACCCAGCCGATCTTAATGCCCAGAACTCCC +
Preference number: 6 (lower is better)
Translates to: SSRVKEYLGMHWSQA*SKSHTQPILMPRTP
Trigger: GGGAGTTCTGGGCATTAAGATCGGCTGGGTGTGCGACTTGGACAAGGCCTGGGACCAGTGCATCCCCAAATACTCCTTCACCCGGCTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS CAA 90 bp ACGCTGCTTTTCTCAGAAACGCTGTCGAGCCGGGTGAAGGAGTATTaGGGGATGCACTGGTCCCAGGCCTTGTCCAAGTCGCACACCCAG +
Preference number: 6 (lower is better)
Translates to: TLLFSETLSSRVKEY*GMHWSQALSKSHTQ
Trigger: CTGGGTGTGCGACTTGGACAAGGCCTGGGACCAGTGCATCCCCAAATACTCCTTCACCCGGCTCGACAGCGTTTCTGAGAAAAGCAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS GCA 72 bp TGCCAGCATTCCCGTATACCAGCACGTCGAAGCGGATaGCAAAAGCCTTCAGGAGGGTGCGGTACTCACTGC +
Preference number: 6 (lower is better)
Translates to: CQHSRIPARRSG*QKPSGGCGTHC
Trigger: GCAGTGAGTACCGCACCCTCCTGAAGGCTTTTGGCATCCGCTTCGACGTGCTGGTATACGGGAATGCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263314.3
CDS GCA 72 bp ACTTGCCAGCTCCCGTATACAGCACGTCGAAGCGGATaGCAAAAGCCTTCAGGAGGGTGCGGTACTCACTGC +
Preference number: 6 (lower is better)
Translates to: TCQLPYTARRSG*QKPSGGCGTHC
Trigger: GCAGTGAGTACCGCACCCTCCTGAAGGCTTTTGGCATCCGCTTCGACGTGCTGTATACGGGAGCTGGCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616487.4
CDS CCA 72 bp CGACCTGGAGGGGGCAGCTTAGAGGGGTTGGAGGAATaGGGAGCCTGTCCCTTTAAGCCATGCAATCCTAGT +
Preference number: 6 (lower is better)
Translates to: RPGGGSLEGLEE*GACPFKPCNPS
Trigger: ACTAGGATTGCATGGCTTAAAGGGACAGGCTCCCCATTCCTCCAACCCCTCTAAGCTGCCCCCTCCAGGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000533436.1
CDS CCA 72 bp CGGAGCCCTTCACCTTGGTTACCACCGAGGACTCAATaGCTGTGTCCCGTACCTGGTAAGCCTTCTCGTGCA +
Preference number: 6 (lower is better)
Translates to: RSPSPWLPPRTQ*LCPVPGKPSRA
Trigger: TGCACGAGAAGGCTTACCAGGTACGGGACACAGCCATTGAGTCCTCGGTGGTAACCAAGGTGAAGGGCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS CCA 72 bp CTGCTTCTCCGCTGTGGTCTGGTCGCTGGGGTACACTaGGTTGGTCAAAGCCGCGATTTTCAGCGTAGTCTC +
Preference number: 6 (lower is better)
Translates to: LLLRCGLVAGVH*VGQSRDFQRSL
Trigger: GAGACTACGCTGAAAATCGCGGCTTTGACCAACCCAGTGTACCCCAGCGACCAGACCACAGCGGAGAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS CAA 90 bp GTGGACTGCTTCTCCGCTGTGGTCTGGTCGCTGGGGTACACTGGGTaGGTCAAAGCCGCGATTTTCAGCGTAGTCTCATTCACCTCCTCA +
Preference number: 6 (lower is better)
Translates to: VDCFSAVVWSLGYTG*VKAAIFSVVSFTSS
Trigger: TGAGGAGGTGAATGAGACTACGCTGAAAATCGCGGCTTTGACCAACCCAGTGTACCCCAGCGACCAGACCACAGCGGAGAAGCAGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS TCA 72 bp TGCCCTGAGGTGGCGTCACGTAATCAGACACATCCATaGCTCTGTTGGCGTAGAGTCCGGAGCCCTTCACCT +
Preference number: 6 (lower is better)
Translates to: CPEVASRNQTHP*LCWRRVRSPSP
Trigger: AGGTGAAGGGCTCCGGACTCTACGCCAACAGAGTCATGGATGTGTCTGATTACGTGACGCCACCTCAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS GCA 72 bp GTGAAGAAGTCGGATATGCAGTTCATGCTGAGAGAGTaGTCAGGGGACACTCAGAAGGGGGCCCAGTGGTGG +
Preference number: 6 (lower is better)
Translates to: VKKSDMQFMLRE*SGDTQKGAQWW
Trigger: CCACCACTGGGCCCCCTTCTGAGTGTCCCCTGAGCACTCTCTCAGCATGAACTGCATATCCGACTTCTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263314.3
ENST00000533436.1
ENST00000616487.4
CDS CCA 72 bp AATCGGTGGACTGCTTCTCCGCTGTGGTCTGGTCGCTaGGGTACACTGGGTTGGTCAAAGCCGCGATTTTCA +
Preference number: 6 (lower is better)
Translates to: NRWTASPLWSGR*GTLGWSKPRFS
Trigger: TGAAAATCGCGGCTTTGACCAACCCAGTGTACCCCAGCGACCAGACCACAGCGGAGAAGCAGTCCACCGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS CAA 72 bp TTCTCAGAAACGCTGTCGAGCCGGGTGAAGGAGTATTaGGGGATGCACTGGTCCCAGGCCTTGTCCAAGTCG +
Preference number: 6 (lower is better)
Translates to: FSETLSSRVKEY*GMHWSQALSKS
Trigger: CGACTTGGACAAGGCCTGGGACCAGTGCATCCCCAAATACTCCTTCACCCGGCTCGACAGCGTTTCTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS CAA 72 bp TTCTCCGCTGTGGTCTGGTCGCTGGGGTACACTGGGTaGGTCAAAGCCGCGATTTTCAGCGTAGTCTCATTC +
Preference number: 6 (lower is better)
Translates to: FSAVVWSLGYTG*VKAAIFSVVSF
Trigger: GAATGAGACTACGCTGAAAATCGCGGCTTTGACCAACCCAGTGTACCCCAGCGACCAGACCACAGCGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS CAA 72 bp TCACGTTTGTGGAGATCATCAGATGAATGCCATCTCTaGCCTTCCGCTGTAAGCCCCAGGAGGGCGAGGACC +
Preference number: 6 (lower is better)
Translates to: SRLWRSSDECHL*PSAVSPRRART
Trigger: GGTCCTCGCCCTCCTGGGGCTTACAGCGGAAGGCAAGAGATGGCATTCATCTGATGATCTCCACAAACGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533436.1
CDS CAA 72 bp AGCGTAGTCTCATTCACCTCCTCAAACTTCTTGGCTTaGTACTGGTCGGCCCCCTTGAGGAAGTTGAGCAGG +
Preference number: 6 (lower is better)
Translates to: SVVSFTSSNFLA*YWSAPLRKLSR
Trigger: CCTGCTCAACTTCCTCAAGGGGGCCGACCAGTACAAAGCCAAGAAGTTTGAGGAGGTGAATGAGACTACGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS CAA 90 bp TCCTCAAACTTCTTGGCTTTGTACTGGTCGGCCCCCTTGAGGAAGTaGAGCAGGATGATGTCACAGAGAACAGTTCCCACTCCCACAGAA +
Preference number: 6 (lower is better)
Translates to: SSNFLALYWSAPLRK*SRMMSQRTVPTPTE
Trigger: TTCTGTGGGAGTGGGAACTGTTCTCTGTGACATCATCCTGCTCAACTTCCTCAAGGGGGCCGACCAGTACAAAGCCAAGAAGTTTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS CCA 72 bp GTCTCATTCACCTCCTCAAACTTCTTGGCTTTGTACTaGTCGGCCCCCTTGAGGAAGTTGAGCAGGATGATG +
Preference number: 6 (lower is better)
Translates to: VSFTSSNFLALY*SAPLRKLSRMM
Trigger: CATCATCCTGCTCAACTTCCTCAAGGGGGCCGACCAGTACAAAGCCAAGAAGTTTGAGGAGGTGAATGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS CAA 72 bp TTCTTGGCTTTGTACTGGTCGGCCCCCTTGAGGAAGTaGAGCAGGATGATGTCACAGAGAACAGTTCCCACT +
Preference number: 6 (lower is better)
Translates to: FLALYWSAPLRK*SRMMSQRTVPT
Trigger: AGTGGGAACTGTTCTCTGTGACATCATCCTGCTCAACTTCCTCAAGGGGGCCGACCAGTACAAAGCCAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS CAA 90 bp TCATTCACCTCCTCAAACTTCTTGGCTTTGTACTGGTCGGCCCCCTaGAGGAAGTTGAGCAGGATGATGTCACAGAGAACAGTTCCCACT +
Preference number: 6 (lower is better)
Translates to: SFTSSNFLALYWSAP*RKLSRMMSQRTVPT
Trigger: AGTGGGAACTGTTCTCTGTGACATCATCCTGCTCAACTTCCTCAAGGGGGCCGACCAGTACAAAGCCAAGAAGTTTGAGGAGGTGAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS CCA 72 bp CTTTTGCCCACCATTCCGTCCTCAATCCACAGTGCCTaGCATGCAGAGATGCTGGTACATTTTTGCCTACAA +
Preference number: 6 (lower is better)
Translates to: LLPTIPSSIHSA*HAEMLVHFCLQ
Trigger: TTGTAGGCAAAAATGTACCAGCATCTCTGCATGCCAGGCACTGTGGATTGAGGACGGAATGGTGGGCAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533436.1
CDS CAA 72 bp TCCTCAAACTTCTTGGCTTTGTACTGGTCGGCCCCCTaGAGGAAGTTGAGCAGGATGATGTCACAGAGAACA +
Preference number: 6 (lower is better)
Translates to: SSNFLALYWSAP*RKLSRMMSQRT
Trigger: TGTTCTCTGTGACATCATCCTGCTCAACTTCCTCAAGGGGGCCGACCAGTACAAAGCCAAGAAGTTTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263314.3
ENST00000616487.4
CDS CCA 72 bp CGTCCTCAATCCACAGTGCCTGGCATGCAGAGATGCTaGTACATTTTTGCCTACAAAGTAGGAGATGATCAG +
Preference number: 6 (lower is better)
Translates to: RPQSTVPGMQRC*YIFAYKVGDDQ
Trigger: CTGATCATCTCCTACTTTGTAGGCAAAAATGTACCAGCATCTCTGCATGCCAGGCACTGTGGATTGAGGACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533436.1
CDS GCA 72 bp TTCCGTCCTCAATCCACAGTGCCTGGCATGCAGAGATaGTGGTACATTTTTGCCTACAAAGTAGGAGATGAT +
Preference number: 6 (lower is better)
Translates to: FRPQSTVPGMQR*WYIFAYKVGDD
Trigger: ATCATCTCCTACTTTGTAGGCAAAAATGTACCAGCATCTCTGCATGCCAGGCACTGTGGATTGAGGACGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533436.1