RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OXNAD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000154814

Ensembl transcript IDs: ENST00000285083.10, ENST00000435829.6, ENST00000442255.5, ENST00000452581.5, ENST00000486267.5, ENST00000605932.5, ENST00000606098.1, ENST00000607329.1, ENST00000627468.2

Found 607 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTAGCAGGCACACAGCCAGCCGTGGTGCTGGCTAAACCGAGACAGTaGGCGACACCTCCCTATCTTCCCATCCCATGCTGCACTGGAGAT +
Preference number: 1 (lower is better)
Translates to: VAGTQPAVVLAKPRQ*ATPPYLPIPCCTGD
Trigger: ATCTCCAGTGCAGCATGGGATGGGAAGATAGGGAGGTGTCGCCCACTGTCTCGGTTTAGCCAGCACCACGGCTGGCTGTGTGCCTGCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR CCA 90 bp TGCCTGCAGGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATaGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTCA +
Preference number: 1 (lower is better)
Translates to: CLQALMGGPQLAAPR*HLSRLLLSRATGLS
Trigger: TGAGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCCTGCAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
3UTR GCA 90 bp TGCGTGCCGCAGGATGGAAAGCAGAGGGTTAATTCCGACTCCTCCTaGAATCAACACGAGGTTTCTAGAGGCATCCGCAGGCTGAGGGTC +
Preference number: 1 (lower is better)
Translates to: CVPQDGKQRVNSDSS*NQHEVSRGIRRLRV
Trigger: GACCCTCAGCCTGCGGATGCCTCTAGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATTAACCCTCTGCTTTCCATCCTGCGGCACGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
3UTR GCA 90 bp GTGGGCGACACCTCCCTATCTTCCCATCCCATGCTGCACTGGAGATaGTCACTTTGCACCTCCACTCCTAATGCAGAGAGGTCTGGGTTA +
Preference number: 1 (lower is better)
Translates to: VGDTSLSSHPMLHWR*SLCTSTPNAERSGL
Trigger: TAACCCAGACCTCTCTGCATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGATAGGGAGGTGTCGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR CCA 90 bp GAGACAGTGGGCGACACCTCCCTATCTTCCCATCCCATGCTGCACTaGAGATGCTCACTTTGCACCTCCACTCCTAATGCAGAGAGGTCT +
Preference number: 1 (lower is better)
Translates to: ETVGDTSLSSHPMLH*RCSLCTSTPNAERS
Trigger: AGACCTCTCTGCATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGATAGGGAGGTGTCGCCCACTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR GCA 90 bp AAACCGAGACAGTGGGCGACACCTCCCTATCTTCCCATCCCATGCTaGACTGGAGATGCTCACTTTGCACCTCCACTCCTAATGCAGAGA +
Preference number: 1 (lower is better)
Translates to: KPRQWATPPYLPIPC*TGDAHFAPPLLMQR
Trigger: TCTCTGCATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGATAGGGAGGTGTCGCCCACTGTCTCGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR TCA 90 bp ACTCCTCCTGCAATCAACACGAGGTTTCTAGAGGCATCCGCAGGCTaGGGGTCAAAGAAGAACTCTCCACCCACTCTCACAGCCACTTCA +
Preference number: 1 (lower is better)
Translates to: TPPAINTRFLEASAG*GSKKNSPPTLTATS
Trigger: TGAAGTGGCTGTGAGAGTGGGTGGAGAGTTCTTCTTTGACCCTCAGCCTGCGGATGCCTCTAGAAACCTCGTGTTGATTGCAGGAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
3UTR GCA 90 bp ACCTCCCTATCTTCCCATCCCATGCTGCACTGGAGATGCTCACTTTaGACCTCCACTCCTAATGCAGAGAGGTCTGGGTTAGGTACTTTC +
Preference number: 1 (lower is better)
Translates to: TSLSSHPMLHWRCSL*TSTPNAERSGLGTF
Trigger: GAAAGTACCTAACCCAGACCTCTCTGCATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGATAGGGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR CCA 90 bp ACCTGCACACCTCAGCTCATTCCAGGCTCAACATTCCTCCTCTTTTaGGTTTGCCTTACTTTTGTCACCATCCCTGGAGGCTCAGGTACC +
Preference number: 1 (lower is better)
Translates to: TCTPQLIPGSTFLLF*VCLTFVTIPGGSGT
Trigger: GGTACCTGAGCCTCCAGGGATGGTGACAAAAGTAAGGCAAACCCAAAAGAGGAGGAATGTTGAGCCTGGAATGAGCTGAGGTGTGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR GCA 90 bp TATCCATTTCTTTTGTTTGCCTGCTCTCTGAGGAGATCTGCTGCGTaGCGCAGGATGGAAAGCAGAGGGTTAATTCCGACTCCTCCTGCA +
Preference number: 1 (lower is better)
Translates to: YPFLLFACSLRRSAA*RRMESRGLIPTPPA
Trigger: TGCAGGAGGAGTCGGAATTAACCCTCTGCTTTCCATCCTGCGGCACGCAGCAGATCTCCTCAGAGAGCAGGCAAACAAAAGAAATGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
3UTR CCA 90 bp CATTTCCATAGCAAGCCAGCCCAGGCACTGAAGGCAGATTCAACATaGAACACATCACCAATGCCTTTGTCCCAAGCAAGAAGCTGCCTC +
Preference number: 1 (lower is better)
Translates to: HFHSKPAQALKADST*NTSPMPLSQARSCL
Trigger: GAGGCAGCTTCTTGCTTGGGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGCTGGCTTGCTATGGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR TCA 90 bp CACACATGCACATACGTAGTTCACATACCTCATCTCATTCTAGGCTaGGGTGCATGTGTGTATACCTCACGCCACCTGCACACCTCAGCT +
Preference number: 1 (lower is better)
Translates to: HTCTYVVHIPHLILG*GACVYTSRHLHTSA
Trigger: AGCTGAGGTGTGCAGGTGGCGTGAGGTATACACACATGCACCTCAGCCTAGAATGAGATGAGGTATGTGAACTACGTATGTGCATGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR GCA 90 bp AGGAAGGAATTCAGCCTGCAGACTCAAAACTGCAACATCGACTCCTaGTGGAATATCCAGCCTGCTGGGCTACCCTGCAAACTTTGGATT +
Preference number: 1 (lower is better)
Translates to: RKEFSLQTQNCNIDS*WNIQPAGLPCKLWI
Trigger: AATCCAAAGTTTGCAGGGTAGCCCAGCAGGCTGGATATTCCAGCAGGAGTCGATGTTGCAGTTTTGAGTCTGCAGGCTGAATTCCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR TCA 90 bp AACTACAATCTGCTTTCTAGCAGTTTCATCAGAGCAGCTTTGGGATaGGGCTCCACCATTCTTTCTATCCACTCTAGGGGACTGCCTCCC +
Preference number: 1 (lower is better)
Translates to: NYNLLSSSFIRAALG*GSTILSIHSRGLPP
Trigger: GGGAGGCAGTCCCCTAGAGTGGATAGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGAAACTGCTAGAAAGCAGATTGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR GCA 90 bp GTGATTTTTCCTTCAACTTTTAGGAAATCGACTAATCTCAGCATGTaGCTGCAGGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGA +
Preference number: 1 (lower is better)
Translates to: VIFPSTFRKSTNLSM*LQALMGGPQLAAPR
Trigger: TCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGTCGATTTCCTAAAAGTTGAAGGAAAAATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
3UTR GCA 90 bp TATCTCATATCCATTTCTTTTGTTTGCCTGCTCTCTGAGGAGATCTaGTGCGTGCCGCAGGATGGAAAGCAGAGGGTTAATTCCGACTCC +
Preference number: 1 (lower is better)
Translates to: YLISISFVCLLSEEI*CVPQDGKQRVNSDS
Trigger: GGAGTCGGAATTAACCCTCTGCTTTCCATCCTGCGGCACGCAGCAGATCTCCTCAGAGAGCAGGCAAACAAAAGAAATGGATATGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
3UTR GCA 90 bp ATGCACATACGTAGTTCACATACCTCATCTCATTCTAGGCTGAGGTaGATGTGTGTATACCTCACGCCACCTGCACACCTCAGCTCATTC +
Preference number: 1 (lower is better)
Translates to: MHIRSSHTSSHSRLR*MCVYLTPPAHLSSF
Trigger: GAATGAGCTGAGGTGTGCAGGTGGCGTGAGGTATACACACATGCACCTCAGCCTAGAATGAGATGAGGTATGTGAACTACGTATGTGCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR GCA 90 bp TGCAACATCGACTCCTGCTGGAATATCCAGCCTGCTGGGCTACCCTaGAAACTTTGGATTTTACATCCTCCACAGTCATGTAAGCCAGTT +
Preference number: 1 (lower is better)
Translates to: CNIDSCWNIQPAGLP*KLWILHPPQSCKPV
Trigger: AACTGGCTTACATGACTGTGGAGGATGTAAAATCCAAAGTTTGCAGGGTAGCCCAGCAGGCTGGATATTCCAGCAGGAGTCGATGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR CCA 90 bp GACTCAAAACTGCAACATCGACTCCTGCTGGAATATCCAGCCTGCTaGGCTACCCTGCAAACTTTGGATTTTACATCCTCCACAGTCATG +
Preference number: 1 (lower is better)
Translates to: DSKLQHRLLLEYPAC*ATLQTLDFTSSTVM
Trigger: CATGACTGTGGAGGATGTAAAATCCAAAGTTTGCAGGGTAGCCCAGCAGGCTGGATATTCCAGCAGGAGTCGATGTTGCAGTTTTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR TCA 90 bp CTAATCAATGCTAAGCACATTTCCATAGCAAGCCAGCCCAGGCACTaGAGGCAGATTCAACATGGAACACATCACCAATGCCTTTGTCCC +
Preference number: 1 (lower is better)
Translates to: LINAKHISIASQPRH*RQIQHGTHHQCLCP
Trigger: GGGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGCTGGCTTGCTATGGAAATGTGCTTAGCATTGATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR TCA 90 bp GACTTGCTCAAGGTCATCTACCTAGTAAGTAGTATAGGTGAGATCTaGACCCAGGCAATCTGGCTCAAGGGCTTTCGAGCCTATACTCTG +
Preference number: 1 (lower is better)
Translates to: DLLKVIYLVSSIGEI*TQAIWLKGFRAYTL
Trigger: CAGAGTATAGGCTCGAAAGCCCTTGAGCCAGATTGCCTGGGTTCAGATCTCACCTATACTACTTACTAGGTAGATGACCTTGAGCAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR CCA 90 bp CGAGCCTATACTCTGAGCCACCGCACTATGAATTCCAAGCCACTCTaGCTGGAGTTAGCTCAATTTAAGTACCAAAAAGATCTGGACAGG +
Preference number: 1 (lower is better)
Translates to: RAYTLSHRTMNSKPL*LELAQFKYQKDLDR
Trigger: CCTGTCCAGATCTTTTTGGTACTTAAATTGAGCTAACTCCAGCCAGAGTGGCTTGGAATTCATAGTGCGGTGGCTCAGAGTATAGGCTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR CCA 90 bp GACTCCTGCTGGAATATCCAGCCTGCTGGGCTACCCTGCAAACTTTaGATTTTACATCCTCCACAGTCATGTAAGCCAGTTCCTCAAAAT +
Preference number: 1 (lower is better)
Translates to: DSCWNIQPAGLPCKL*ILHPPQSCKPVPQN
Trigger: ATTTTGAGGAACTGGCTTACATGACTGTGGAGGATGTAAAATCCAAAGTTTGCAGGGTAGCCCAGCAGGCTGGATATTCCAGCAGGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR CCA 90 bp AAGGAATTCAGCCTGCAGACTCAAAACTGCAACATCGACTCCTGCTaGAATATCCAGCCTGCTGGGCTACCCTGCAAACTTTGGATTTTA +
Preference number: 1 (lower is better)
Translates to: KEFSLQTQNCNIDSC*NIQPAGLPCKLWIL
Trigger: TAAAATCCAAAGTTTGCAGGGTAGCCCAGCAGGCTGGATATTCCAGCAGGAGTCGATGTTGCAGTTTTGAGTCTGCAGGCTGAATTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR CCA 90 bp CAAAGAACTACAATCTGCTTTCTAGCAGTTTCATCAGAGCAGCTTTaGGATGAGGCTCCACCATTCTTTCTATCCACTCTAGGGGACTGC +
Preference number: 1 (lower is better)
Translates to: QRTTICFLAVSSEQL*DEAPPFFLSTLGDC
Trigger: GCAGTCCCCTAGAGTGGATAGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGAAACTGCTAGAAAGCAGATTGTAGTTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR TCA 90 bp AAATGTTCTTCAGCACTTAGCACCAGAATAATGGCACTGAAAGGATaGACACTCCAGGCAAAGGTGATGACCTGGCCCATCTCAGCAATT +
Preference number: 1 (lower is better)
Translates to: KCSSALSTRIMALKG*TLQAKVMTWPISAI
Trigger: AATTGCTGAGATGGGCCAGGTCATCACCTTTGCCTGGAGTGTTCATCCTTTCAGTGCCATTATTCTGGTGCTAAGTGCTGAAGAACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR CCA 90 bp TATATTTCACTGCCAATTCTATCACTCTCTCTTGTTCTAGCAGTCTaGGACTGGAGCATATTGAAAACCCACCAACCACAGAGACTCCTG +
Preference number: 1 (lower is better)
Translates to: YISLPILSLSLVLAV*DWSILKTHQPQRLL
Trigger: CAGGAGTCTCTGTGGTTGGTGGGTTTTCAATATGCTCCAGTCCCAGACTGCTAGAACAAGAGAGAGTGATAGAATTGGCAGTGAAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
3UTR TCA 90 bp GGGCTCCTTGTAGTGATCCAGAGCTTCACATATTCCCTTCACCTCTaGGGTACTAATGACCATTTCCTTGAATGGATTATGATATTCCCA +
Preference number: 1 (lower is better)
Translates to: GLLVVIQSFTYSLHL*GTNDHFLEWIMIFP
Trigger: TGGGAATATCATAATCCATTCAAGGAAATGGTCATTAGTACCTCAGAGGTGAAGGGAATATGTGAAGCTCTGGATCACTACAAGGAGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR CCA 90 bp CTTTGTCTGCCTCCTACCACCACTTCTCAAAGCAAATGTGTTCTTTaGGTACATGGTTGTTTTCCAGTTGCTTGGAGAAAAAGTCTGTCA +
Preference number: 1 (lower is better)
Translates to: LCLPPTTTSQSKCVL*VHGCFPVAWRKSLS
Trigger: TGACAGACTTTTTCTCCAAGCAACTGGAAAACAACCATGTACCCAAAGAACACATTTGCTTTGAGAAGTGGTGGTAGGAGGCAGACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442255.5
3UTR CCA 90 bp CAAAGCAAATGTGTTCTTTGGGTACATGGTTGTTTTCCAGTTGCTTaGAGAAAAAGTCTGTCATTGGAGGTGGGCCACAAATATAGAACA +
Preference number: 1 (lower is better)
Translates to: QSKCVLWVHGCFPVA*RKSLSLEVGHKYRT
Trigger: TGTTCTATATTTGTGGCCCACCTCCAATGACAGACTTTTTCTCCAAGCAACTGGAAAACAACCATGTACCCAAAGAACACATTTGCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442255.5
3UTR GCA 90 bp TATGGCTTGAGTTCCGCATTGATTTGTGTAGTCTGTTTTGTAACATaGAAACTGCATGCAATCTTCTCAGGAAATTCATTTACTAAATCA +
Preference number: 1 (lower is better)
Translates to: YGLSSALICVVCFVT*KLHAIFSGNSFTKS
Trigger: TGATTTAGTAAATGAATTTCCTGAGAAGATTGCATGCAGTTTGCATGTTACAAAACAGACTACACAAATCAATGCGGAACTCAAGCCATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
3UTR CAA 90 bp TTCCCAGGCTCCCTTCACCCTCCTGTGATCTCTATGCAGGCAACCTaGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: FPGSLHPPVISMQAT*GPGLLVIKGMAWPQ
Trigger: CTGAGGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAGAGATCACAGGAGGGTGAAGGGAGCCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR TCA 90 bp GAGATCTGCTGCGTGCCGCAGGATGGAAAGCAGAGGGTTAATTCCGACTCCTCCGGACAGGAGCTCTCCTaGGTAGATCTCACCTCTTTA +
Preference number: 2 (lower is better)
Translates to: EICCVPQDGKQRVNSDSSGQELS*VDLTSL
Trigger: TAAAGAGGTGAGATCTACTCAGGAGAGCTCCTGTCC...GGAGGAGTCGGAATTAACCCTCTGCTTTCCATCCTGCGGCACGCAGCAGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442255.5
3UTR-3UTR TCA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGGGACAGGAGCTCTCCTaGGTAGATCTCACCTCTTTA +
Preference number: 2 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQGQELS*VDLTSL
Trigger: TAAAGAGGTGAGATCTACTCAGGAGAGCTCCTGTCC...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CCA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGTCATCAGAGCAGCTTTaGGATGAGGCTCCACCATTC +
Preference number: 2 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQSSEQL*DEAPPF
Trigger: GAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGA...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CCA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACACTATGCAGGCAACCTTaGGCCCAGGACTACTTGTCA +
Preference number: 2 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTLCRQP*AQDYLS
Trigger: TGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAG...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR CAA 90 bp TGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATCCTaGCATCTCATCATGCTCCTATGCCCTCAGCCTGGGCACTTTGGG +
Preference number: 2 (lower is better)
Translates to: CLHQLVDVPLDNPTS*HLIMLLCPQPGHFG
Trigger: CCCAAAGTGCCCAGGCTGAGGGCATAGGAGCATGATGAGATGCAAGGATGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR TCA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGCACCTTCAGGTCCCATaGATCATATCTGTTCAAGCC +
Preference number: 2 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQHLQVP*IISVQA
Trigger: GGCTTGAACAGATATGATTCATGGGACCTGAAGGTG...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CCA 90 bp AACATCGACTCCTGCTGGAATATCCAGCCTGCTGGGCTACCCTGCAAACTTTGGTTTTGTCACCATCCCTaGAGGCTCAGGTACCCCCTT +
Preference number: 2 (lower is better)
Translates to: NIDSCWNIQPAGLPCKLWFCHHP*RLRYPL
Trigger: AAGGGGGTACCTGAGCCTCCAGGGATGGTGACAAAA...CCAAAGTTTGCAGGGTAGCCCAGCAGGCTGGATATTCCAGCAGGAGTCGATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR-3UTR TCA 90 bp TCGAGCCTATACTCTGAGCCACCGCACTATGAATTCCAAGCCACTCTGGCTGGAGGACAGGAGCTCTCCTaGGTAGATCTCACCTCTTTA +
Preference number: 2 (lower is better)
Translates to: SSLYSEPPHYEFQATLAGGQELS*VDLTSL
Trigger: TAAAGAGGTGAGATCTACTCAGGAGAGCTCCTGTCC...TCCAGCCAGAGTGGCTTGGAATTCATAGTGCGGTGGCTCAGAGTATAGGCTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR TCA 90 bp TCGAGCCTATACTCTGAGCCACCGCACTATGAATTCCAAGCCACTCTGGCTGGAAGAGCAGCTTTGGGATaGGGCTCCACCATTCTTTCT +
Preference number: 2 (lower is better)
Translates to: SSLYSEPPHYEFQATLAGRAALG*GSTILS
Trigger: AGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCT...TCCAGCCAGAGTGGCTTGGAATTCATAGTGCGGTGGCTCAGAGTATAGGCTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR GCA 90 bp TCTTCCCATCCCATGCTGCACTGGAGATGCTCACTTTGCACCTCCACTCCTAATCTCATCATGCTCCTATaGCCTCAGCCTGGGCACTTT +
Preference number: 2 (lower is better)
Translates to: SSHPMLHWRCSLCTSTPNLIMLL*PQPGHF
Trigger: AAAGTGCCCAGGCTGAGGGCATAGGAGCATGATGAG...ATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CCA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGGACAAAACTCAAAACTaGGCAGAAGCTAGAGTCACC +
Preference number: 2 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQDKTQN*AEARVT
Trigger: GGTGACTCTAGCTTCTGCCCAGTTTTGAGTTTTGTC...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CCA 90 bp TCGAGCCTATACTCTGAGCCACCGCACTATGAATTCCAAGCCACTCTGGCTGGAAGTACCAAAAAGATCTaGACAGGCCTGGCAGGCAAG +
Preference number: 2 (lower is better)
Translates to: SSLYSEPPHYEFQATLAGSTKKI*TGLAGK
Trigger: CTTGCCTGCCAGGCCTGTCCAGATCTTTTTGGTACT...TCCAGCCAGAGTGGCTTGGAATTCATAGTGCGGTGGCTCAGAGTATAGGCTCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR GCA 90 bp GCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATCCTTGTCCACTCTAGGGGACTaGCTCCCAATCTCAGACTTA +
Preference number: 2 (lower is better)
Translates to: ADCLHQLVDVPLDNPTSLSTLGD*LPISDL
Trigger: TAAGTCTGAGATTGGGAGGCAGTCCCCTAGAGTGGA...CAAGGATGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR GCA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACAAGTCCCTGGGAGGCCTaGAACAACAAAGATAAGAAA +
Preference number: 2 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTSPWEA*NNKDKK
Trigger: TTTCTTATCTTTGTTGTTGCAGGCCTCCCAGGGACT...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR GCA 90 bp GCTGGAATATCCAGCCTGCTGGGCTACCCTGCAAACTTTGGATTTTACATCCTCATACCTCACGCCACCTaGACACCTCAGCTCATTCCA +
Preference number: 2 (lower is better)
Translates to: AGISSLLGYPANFGFYILIPHAT*TPQLIP
Trigger: TGGAATGAGCTGAGGTGTGCAGGTGGCGTGAGGTAT...GAGGATGTAAAATCCAAAGTTTGCAGGGTAGCCCAGCAGGCTGGATATTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR-3UTR CCA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGAAGGCAGATTCAACATaGAACACATCACCAATGCCT +
Preference number: 2 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQKADST*NTSPMP
Trigger: AGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTT...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CCA 90 bp GCTGGAATATCCAGCCTGCTGGGCTACCCTGCAAACTTTGGATTTTACATCCTCGGTGACAAGTCCACCTaGAGCCAGCATGCCTGTATT +
Preference number: 2 (lower is better)
Translates to: AGISSLLGYPANFGFYILGDKST*SQHACI
Trigger: AATACAGGCATGCTGGCTCCAGGTGGACTTGTCACC...GAGGATGTAAAATCCAAAGTTTGCAGGGTAGCCCAGCAGGCTGGATATTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR-3UTR TCA 90 bp GATCTCTATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCAGAGCAGCTTTGGGATaGGGCTCCACCATTCTTTCT +
Preference number: 2 (lower is better)
Translates to: DLYAGNLGPRTTCHKRNGRAALG*GSTILS
Trigger: AGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCT...GCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR GCA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCTTAAGGAGCTGCTGGTaGCAAGAACAATTCTGGCAA +
Preference number: 2 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLALRSCW*QEQFWQ
Trigger: TTGCCAGAATTGTTCTTGGCACCAGCAGCTCCTTAA...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR GCA 90 bp TCGAGCCTATACTCTGAGCCACCGCACTATGAATTCCAAGCCACTCTGGCTGGAAGTCCCTGGGAGGCCTaGAACAACAAAGATAAGAAA +
Preference number: 2 (lower is better)
Translates to: SSLYSEPPHYEFQATLAGSPWEA*NNKDKK
Trigger: TTTCTTATCTTTGTTGTTGCAGGCCTCCCAGGGACT...TCCAGCCAGAGTGGCTTGGAATTCATAGTGCGGTGGCTCAGAGTATAGGCTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CCA 90 bp GATCTCTATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCTCATCAGAGCAGCTTTaGGATGAGGCTCCACCATTC +
Preference number: 2 (lower is better)
Translates to: DLYAGNLGPRTTCHKRNGSSEQL*DEAPPF
Trigger: GAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGA...GCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CCA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCCCTATGCCCTCAGCCTaGGCACTTTGGGGCCAACTG +
Preference number: 2 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMIPMPSA*ALWGQL
Trigger: CAGTTGGCCCCAAAGTGCCCAGGCTGAGGGCATAGG...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CCA 90 bp TCTTCCCATCCCATGCTGCACTGGAGATGCTCACTTTGCACCTCCACTCCTAATATAAAAGGAATGGCCTaGCCTCAGTCAGGACTTCTT +
Preference number: 2 (lower is better)
Translates to: SSHPMLHWRCSLCTSTPNIKGMA*PQSGLL
Trigger: AAGAAGTCCTGACTGAGGCCAGGCCATTCCTTTTAT...ATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CCA 90 bp TCTTCCCATCCCATGCTGCACTGGAGATGCTCACTTTGCACCTCCACTCCTAATGACAAAACTCAAAACTaGGCAGAAGCTAGAGTCACC +
Preference number: 2 (lower is better)
Translates to: SSHPMLHWRCSLCTSTPNDKTQN*AEARVT
Trigger: GGTGACTCTAGCTTCTGCCCAGTTTTGAGTTTTGTC...ATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR TCA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCCCCTTCACCCTCCTGTaGTCTCTATGCAGGCAACCT +
Preference number: 2 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMIPFTLL*SLCRQP
Trigger: AGGTTGCCTGCATAGAGATCACAGGAGGGTGAAGGG...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR GCA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCTCCTCCCCCGCAGACTaGCTTCACCAGTTAGTAGAC +
Preference number: 2 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMISSPAD*LHQLVD
Trigger: GTCTACTAACTGGTGAAGGCAGTCTGCGGGGGAGGA...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CCA 90 bp GCCCAGGCACTGAAGGCAGATTCAACATGGAACACATCACCAATGCCTTTGTCCTTTAAGTCTGCCAGCTaGCTTTTATTATCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: AQALKADSTWNTSPMPLSFKSAS*LLLSSW
Trigger: CCAGCTGGATAATAAAAGCCAGCTGGCAGACTTAAA...GGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CCA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCTCAGCCTGGGCACTTTaGGGCCAACTGGTAAGTCAG +
Preference number: 2 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMISAWAL*GQLVSQ
Trigger: CTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCTGA...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR GCA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCAGGACAGATGACCCTTaGTCTCTGACAGTAGCAGGC +
Preference number: 2 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMIRTDDP*SLTVAG
Trigger: GCCTGCTACTGTCAGAGAGCAAGGGTCATCTGTCCT...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR TCA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCCAATTCTGCCAATACTaGGTCAGCAACAGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMIQFCQY*VSNRVA
Trigger: TGCCACCCTGTTGCTGACTCAGTATTGGCAGAATTG...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR TCA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCATGGCACTGAAAGGATaGACACTCCAGGCAAAGGTG +
Preference number: 2 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMIMALKG*TLQAKV
Trigger: CACCTTTGCCTGGAGTGTTCATCCTTTCAGTGCCAT...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR GCA 90 bp ATTCACACTCATCCATCTCTACAGCCACAGTGGTTTTCCTTAGTTGCCTCCAACCATGCCTGTATTTCTTaGCATGGGGCCATATTGAAC +
Preference number: 2 (lower is better)
Translates to: IHTHPSLQPQWFSLVASNHACIS*HGAILN
Trigger: GTTCAATATGGCCCCATGGCAAGAAATACAGGCATG...GTTGGAGGCAACTAAGGAAAACCACTGTGGCTGTAGAGATGGATGAGTGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR-3UTR CCA 90 bp GAAGCTAGAGTCACCTTCAGGTCCCATGAATCATATCTGTTCAAGCCCACAAGTATGTTAAGGAGCTGCTaGTGCCAAGAACAATTCTGG +
Preference number: 2 (lower is better)
Translates to: EARVTFRSHESYLFKPTSMLRSC*CQEQFW
Trigger: CCAGAATTGTTCTTGGCACCAGCAGCTCCTTAACAT...ACTTGTGGGCTTGAACAGATATGATTCATGGGACCTGAAGGTGACTCTAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CCA 90 bp TCGAGCCTATACTCTGAGCCACCGCACTATGAATTCCAAGCCACTCTGGCTGGAGACCATTTCCTTGAATaGATTATGATATTCCCATCA +
Preference number: 2 (lower is better)
Translates to: SSLYSEPPHYEFQATLAGDHFLE*IMIFPS
Trigger: TGATGGGAATATCATAATCCATTCAAGGAAATGGTC...TCCAGCCAGAGTGGCTTGGAATTCATAGTGCGGTGGCTCAGAGTATAGGCTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CCA 90 bp CAGAGGGTTAATTCCGACTCCTCCTGCAATCAACACGAGGTTTCTAGAGGCATCAAGAAATCAACCCACTaGCCAGCTTTAAAGGAAAAG +
Preference number: 2 (lower is better)
Translates to: QRVNSDSSCNQHEVSRGIKKSTH*PALKEK
Trigger: CTTTTCCTTTAAAGCTGGCCAGTGGGTTGATTTCTT...GATGCCTCTAGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATTAACCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
3UTR-3UTR CCA 90 bp TCTCAGGAGAATCCTGATGAATCAGATACAAATGCTGTGATGCCATTAATGGGGTCTTGTCTCTGGAGATaGCCGCTAGTACTCTTCTGC +
Preference number: 2 (lower is better)
Translates to: SQENPDESDTNAVMPLMGSCLWR*PLVLFC
Trigger: GCAGAAGAGTACTAGCGGCCATCTCCAGAGACAAGA...CCCCATTAATGGCATCACAGCATTTGTATCTGATTCATCAGGATTCTCCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR-3UTR TCA 90 bp CAGGAGAATCCTGATGAATCAGATACAAATGCTGTGATGCCATTAATGGGGAGAACTTTTATCTTAGGGTaGCAAGTCCACCTGGAGCCA +
Preference number: 2 (lower is better)
Translates to: QENPDESDTNAVMPLMGRTFILG*QVHLEP
Trigger: TGGCTCCAGGTGGACTTGTCACCCTAAGATAAAAGT...TCTCCCCATTAATGGCATCACAGCATTTGTATCTGATTCATCAGGATTCTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR-3UTR GCA 90 bp CAGAGGGTTAATTCCGACTCCTCCTGCAATCAACACGAGGTTTCTAGAGGCATCGTTCGTATATTTCACTaGCAATTCTATCACTCTCTC +
Preference number: 2 (lower is better)
Translates to: QRVNSDSSCNQHEVSRGIVRIFH*QFYHSL
Trigger: GAGAGAGTGATAGAATTGGCAGTGAAATATACGAAC...GATGCCTCTAGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATTAACCCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
3UTR-3UTR CCA 90 bp GAAGCTAGAGTCACCTTCAGGTCCCATGAATCATATCTGTTCAAGCCCACAAGTTTTAAGTCTGCCAGCTaGCTTTTATTATCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: EARVTFRSHESYLFKPTSFKSAS*LLLSSW
Trigger: CCAGCTGGATAATAAAAGCCAGCTGGCAGACTTAAA...ACTTGTGGGCTTGAACAGATATGATTCATGGGACCTGAAGGTGACTCTAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CCA 90 bp CACTCATCCATCTCTACAGCCACAGTGGTTTTCCTTAGTTGCCTCCAACTTTTACTGTATTTCTTGCCATaGGGCCATATTGAACTTTCC +
Preference number: 2 (lower is better)
Translates to: HSSISTATVVFLSCLQLLLYFLP*GHIELS
Trigger: GGAAAGTTCAATATGGCCCCATGGCAAGAAATACAG...TAAAAGTTGGAGGCAACTAAGGAAAACCACTGTGGCTGTAGAGATGGATGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR-3UTR TCA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCTATTCCCTTCACCTCTaGGGTACTAATGACCATTTC +
Preference number: 2 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMIYSLHL*GTNDHF
Trigger: GAAATGGTCATTAGTACCTCAGAGGTGAAGGGAATA...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CCA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCAAGGCAGATTCAACATaGAACACATCACCAATGCCT +
Preference number: 2 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMIKADST*NTSPMP
Trigger: AGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTT...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR CAA 90 bp CGTTATTCTTCCTTCCGTGATGTATGGCTTGAGTTCCGCATTGATTaGTGTAGTCTGTTTTGTAACATGCAAACTGCATGCAATCTTCTC +
Preference number: 2 (lower is better)
Translates to: RYSSFRDVWLEFRID*CSLFCNMQTACNLL
Trigger: GAGAAGATTGCATGCAGTTTGCATGTTACAAAACAGACTACACAAATCAATGCGGAACTCAAGCCATACATCACGGAAGGAAGAATAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
3UTR CAA 90 bp CTTCTCAAAGCAAATGTGTTCTTTGGGTACATGGTTGTTTTCCAGTaGCTTGGAGAAAAAGTCTGTCATTGGAGGTGGGCCACAAATATA +
Preference number: 2 (lower is better)
Translates to: LLKANVFFGYMVVFQ*LGEKVCHWRWATNI
Trigger: TATATTTGTGGCCCACCTCCAATGACAGACTTTTTCTCCAAGCAACTGGAAAACAACCATGTACCCAAAGAACACATTTGCTTTGAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442255.5
3UTR-3UTR TCA 90 bp TTGAACATACCCTTTTCTTGTGCAACTTCTTGCTTTGAGCATGATTTTAAATGGCATCTCATTCTAGGCTaGGGTGCATGTGTGTATACC +
Preference number: 2 (lower is better)
Translates to: LNIPFSCATSCFEHDFKWHLILG*GACVYT
Trigger: GGTATACACACATGCACCTCAGCCTAGAATGAGATG...CCATTTAAAATCATGCTCAAAGCAAGAAGTTGCACAAGAAAAGGGTATGTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR-3UTR GCA 90 bp TCTTCCTTCCGTGATGTATGGCTTGAGTTCCGCATTGATTTGTGTAGTCTGTTTAACATGCAAACTGCATaGAATCTTCTCAGGAAATTC +
Preference number: 2 (lower is better)
Translates to: SSFRDVWLEFRIDLCSLFNMQTA*NLLRKF
Trigger: GAATTTCCTGAGAAGATTGCATGCAGTTTGCATGTT...AAACAGACTACACAAATCAATGCGGAACTCAAGCCATACATCACGGAAGGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442255.5
3UTR-3UTR GCA 90 bp ATGTATGGCTTGAGTTCCGCATTGATTTGTGTAGTCTGTTTTGTAACATGCAAATTTCTTTTGTTTGCCTaGTCTCTGAGGAGATCTGCT +
Preference number: 2 (lower is better)
Translates to: MYGLSSALICVVCFVTCKFLLFA*SLRRSA
Trigger: AGCAGATCTCCTCAGAGAGCAGGCAAACAAAAGAAA...TTTGCATGTTACAAAACAGACTACACAAATCAATGCGGAACTCAAGCCATACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442255.5
3UTR-3UTR CCA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCGACCATTTCCTTGAATaGATTATGATATTCCCATCA +
Preference number: 2 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMIDHFLE*IMIFPS
Trigger: TGATGGGAATATCATAATCCATTCAAGGAAATGGTC...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CCA 90 bp ATTATAGATGAGGTCATTCTGTATAAGCTGACATGGAAGGAATTACAGGAAATGTTTTCTTCTTGTCTCTaGAGATGGCCGCTAGTACTC +
Preference number: 2 (lower is better)
Translates to: IIDEVILYKLTWKELQEMFSSCL*RWPLVL
Trigger: GAGTACTAGCGGCCATCTCCAGAGACAAGAAGAAAA...CATTTCCTGTAATTCCTTCCATGTCAGCTTATACAGAATGACCTCATCTATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR-3UTR CCA 90 bp AAACTTCACAGTCTCTTAGACTTTAGCCAAATTTGTCTCCTTGTAGAAAAGCAAACATTCCTCCTCTTTTaGGTTTGCCTTACTTTTGTC +
Preference number: 2 (lower is better)
Translates to: KLHSLLDFSQICLLVEKQTFLLF*VCLTFV
Trigger: GACAAAAGTAAGGCAAACCCAAAAGAGGAGGAATGT...TTGCTTTTCTACAAGGAGACAAATTTGGCTAAAGTCTAAGAGACTGTGAAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR CCA 72 bp ACACAGCCAGCCGTGGTGCTGGCTAAACCGAGACAGTaGGCGACACCTCCCTATCTTCCCATCCCATGCTGC +
Preference number: 3 (lower is better)
Translates to: TQPAVVLAKPRQ*ATPPYLPIPCC
Trigger: GCAGCATGGGATGGGAAGATAGGGAGGTGTCGCCCACTGTCTCGGTTTAGCCAGCACCACGGCTGGCTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR CCA 72 bp GCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATaGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACA +
Preference number: 3 (lower is better)
Translates to: ALMGGPQLAAPR*HLSRLLLSRAT
Trigger: TGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
3UTR-3UTR CAA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACACTCAGCCTGGGCACTTaGGGGCCAACTGGTAAGTCA +
Preference number: 3 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTLSLGT*GPTGKS
Trigger: TGACTTACCAGTTGGCCCCAAAGTGCCCAGGCTGAG...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR CCA 72 bp GGCGACACCTCCCTATCTTCCCATCCCATGCTGCACTaGAGATGCTCACTTTGCACCTCCACTCCTAATGCA +
Preference number: 3 (lower is better)
Translates to: GDTSLSSHPMLH*RCSLCTSTPNA
Trigger: TGCATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGATAGGGAGGTGTCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CAA 90 bp GCCACCTGCACACCTCAGCTCATTCCAGGCTCAACATTCCTCCTCTTTTGGGTTTGCCATGGGGCCATATaGAACTTTCCTCTGAGCCTC +
Preference number: 3 (lower is better)
Translates to: ATCTPQLIPGSTFLLFWVCHGAI*NFPLSL
Trigger: GAGGCTCAGAGGAAAGTTCAATATGGCCCCATGGCA...AACCCAAAAGAGGAGGAATGTTGAGCCTGGAATGAGCTGAGGTGTGCAGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR GCA 72 bp TCTTCCCATCCCATGCTGCACTGGAGATGCTCACTTTaGACCTCCACTCCTAATGCAGAGAGGTCTGGGTTA +
Preference number: 3 (lower is better)
Translates to: SSHPMLHWRCSL*TSTPNAERSGL
Trigger: TAACCCAGACCTCTCTGCATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR GCA 72 bp CAGGATGGAAAGCAGAGGGTTAATTCCGACTCCTCCTaGAATCAACACGAGGTTTCTAGAGGCATCCGCAGG +
Preference number: 3 (lower is better)
Translates to: QDGKQRVNSDSS*NQHEVSRGIRR
Trigger: CCTGCGGATGCCTCTAGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATTAACCCTCTGCTTTCCATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
3UTR GCA 72 bp CTTTTGTTTGCCTGCTCTCTGAGGAGATCTGCTGCGTaGCGCAGGATGGAAAGCAGAGGGTTAATTCCGACT +
Preference number: 3 (lower is better)
Translates to: LLFACSLRRSAA*RRMESRGLIPT
Trigger: AGTCGGAATTAACCCTCTGCTTTCCATCCTGCGGCACGCAGCAGATCTCCTCAGAGAGCAGGCAAACAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
3UTR GCA 72 bp GACAAGTCCACCTGGAGCCAGCATGCCTGTATTTCTTaGCATGGGGCCATATTGAACTTTCCTCTGAGCCTC +
Preference number: 3 (lower is better)
Translates to: DKSTWSQHACIS*HGAILNFPLSL
Trigger: GAGGCTCAGAGGAAAGTTCAATATGGCCCCATGGCAAGAAATACAGGCATGCTGGCTCCAGGTGGACTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR GCA 72 bp CCTTCAACTTTTAGGAAATCGACTAATCTCAGCATGTaGCTGCAGGCGCTGATGGGTGGACCACAGCTAGCA +
Preference number: 3 (lower is better)
Translates to: PSTFRKSTNLSM*LQALMGGPQLA
Trigger: TGCTAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGTCGATTTCCTAAAAGTTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
3UTR GCA 72 bp CGTAGTTCACATACCTCATCTCATTCTAGGCTGAGGTaGATGTGTGTATACCTCACGCCACCTGCACACCTC +
Preference number: 3 (lower is better)
Translates to: RSSHTSSHSRLR*MCVYLTPPAHL
Trigger: GAGGTGTGCAGGTGGCGTGAGGTATACACACATGCACCTCAGCCTAGAATGAGATGAGGTATGTGAACTACG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR GCA 72 bp CGGAAGAGGAAGGAATTCAGCCTGCAGACTCAAAACTaGAACATCGACTCCTGCTGGAATATCCAGCCTGCT +
Preference number: 3 (lower is better)
Translates to: RKRKEFSLQTQN*NIDSCWNIQPA
Trigger: AGCAGGCTGGATATTCCAGCAGGAGTCGATGTTGCAGTTTTGAGTCTGCAGGCTGAATTCCTTCCTCTTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR CCA 72 bp GTCCACCTGGAGCCAGCATGCCTGTATTTCTTGCCATaGGGCCATATTGAACTTTCCTCTGAGCCTCTGAAA +
Preference number: 3 (lower is better)
Translates to: VHLEPACLYFLP*GHIELSSEPLK
Trigger: TTTCAGAGGCTCAGAGGAAAGTTCAATATGGCCCCATGGCAAGAAATACAGGCATGCTGGCTCCAGGTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR TCA 72 bp TCAGCACTTAGCACCAGAATAATGGCACTGAAAGGATaGACACTCCAGGCAAAGGTGATGACCTGGCCCATC +
Preference number: 3 (lower is better)
Translates to: SALSTRIMALKG*TLQAKVMTWPI
Trigger: GATGGGCCAGGTCATCACCTTTGCCTGGAGTGTTCATCCTTTCAGTGCCATTATTCTGGTGCTAAGTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR GCA 72 bp TCCATTTCTTTTGTTTGCCTGCTCTCTGAGGAGATCTaGTGCGTGCCGCAGGATGGAAAGCAGAGGGTTAAT +
Preference number: 3 (lower is better)
Translates to: SISFVCLLSEEI*CVPQDGKQRVN
Trigger: ATTAACCCTCTGCTTTCCATCCTGCGGCACGCAGCAGATCTCCTCAGAGAGCAGGCAAACAAAAGAAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
3UTR GCA 72 bp CTCATTCCAGGCTCAACATTCCTCCTCTTTTGGGTTTaGCTTACTTTTGTCACCATCCCTGGAGGCTCAGGT +
Preference number: 3 (lower is better)
Translates to: LIPGSTFLLFWV*LTFVTIPGGSG
Trigger: ACCTGAGCCTCCAGGGATGGTGACAAAAGTAAGGCAAACCCAAAAGAGGAGGAATGTTGAGCCTGGAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR-3UTR CAA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGTGTCCAAACTTAACTTaGATGGACCAAATAAGACTG +
Preference number: 3 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQCPNLT*MDQIRL
Trigger: CAGTCTTATTTGGTCCATCAAAGTTAAGTTTGGACA...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CAA 90 bp AATCAACACGAGGTTTCTAGAGGCATCCGCAGGCTGAGGGTCAAAGAAGAACTCTTTATTTCTCAGCCCTaGACACCCCTTCAGGTGGTA +
Preference number: 3 (lower is better)
Translates to: NQHEVSRGIRRLRVKEELFISQP*TPLQVV
Trigger: TACCACCTGAAGGGGTGTCAAGGGCTGAGAAATAAA...GAGTTCTTCTTTGACCCTCAGCCTGCGGATGCCTCTAGAAACCTCGTGTTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
3UTR-3UTR CAA 90 bp AGGAGATCTGCTGCGTGCCGCAGGATGGAAAGCAGAGGGTTAATTCCGACTCCTTTTAAAGGAAAAGTCTaGATCAGCAACAAGCAAGCG +
Preference number: 3 (lower is better)
Translates to: RRSAACRRMESRGLIPTPFKGKV*ISNKQA
Trigger: CGCTTGCTTGTTGCTGATCAAGACTTTTCCTTTAAA...AGGAGTCGGAATTAACCCTCTGCTTTCCATCCTGCGGCACGCAGCAGATCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
3UTR TCA 72 bp CTGCTTTCTAGCAGTTTCATCAGAGCAGCTTTGGGATaGGGCTCCACCATTCTTTCTATCCACTCTAGGGGA +
Preference number: 3 (lower is better)
Translates to: LLSSSFIRAALG*GSTILSIHSRG
Trigger: TCCCCTAGAGTGGATAGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGAAACTGCTAGAAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR TCA 72 bp ACATACGTAGTTCACATACCTCATCTCATTCTAGGCTaGGGTGCATGTGTGTATACCTCACGCCACCTGCAC +
Preference number: 3 (lower is better)
Translates to: TYVVHIPHLILG*GACVYTSRHLH
Trigger: GTGCAGGTGGCGTGAGGTATACACACATGCACCTCAGCCTAGAATGAGATGAGGTATGTGAACTACGTATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR-3UTR CAA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCTCTATGCAGGCAACCTaGGGCCCAGGACTACTTGTC +
Preference number: 3 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMISMQAT*GPGLLV
Trigger: GACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAGA...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR CCA 72 bp TGGAATATCCAGCCTGCTGGGCTACCCTGCAAACTTTaGATTTTACATCCTCCACAGTCATGTAAGCCAGTT +
Preference number: 3 (lower is better)
Translates to: WNIQPAGLPCKL*ILHPPQSCKPV
Trigger: AACTGGCTTACATGACTGTGGAGGATGTAAAATCCAAAGTTTGCAGGGTAGCCCAGCAGGCTGGATATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR-3UTR CAA 90 bp TCTTCCCATCCCATGCTGCACTGGAGATGCTCACTTTGCACCTCCACTCCTAATTGTCCAAACTTAACTTaGATGGACCAAATAAGACTG +
Preference number: 3 (lower is better)
Translates to: SSHPMLHWRCSLCTSTPNCPNLT*MDQIRL
Trigger: CAGTCTTATTTGGTCCATCAAAGTTAAGTTTGGACA...ATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CAA 90 bp TCTCAGGAGAATCCTGATGAATCAGATACAAATGCTGTGATGCCATTAATGGGGGCATGCCTGTATTTCTaGCCATGGGGCCATATTGAA +
Preference number: 3 (lower is better)
Translates to: SQENPDESDTNAVMPLMGACLYF*PWGHIE
Trigger: TTCAATATGGCCCCATGGCAAGAAATACAGGCATGC...CCCCATTAATGGCATCACAGCATTTGTATCTGATTCATCAGGATTCTCCTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR GCA 72 bp CAAATGTGTTCTTTGGGTACATGGTTGTTTTCCAGTTaGTTGGAGAAAAAGTCTGTCATTGGAGGTGGGCCA +
Preference number: 3 (lower is better)
Translates to: QMCSLGTWLFSS*LEKKSVIGGGP
Trigger: TGGCCCACCTCCAATGACAGACTTTTTCTCCAAGCAACTGGAAAACAACCATGTACCCAAAGAACACATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442255.5
3UTR CCA 72 bp ACAATCTGCTTTCTAGCAGTTTCATCAGAGCAGCTTTaGGATGAGGCTCCACCATTCTTTCTATCCACTCTA +
Preference number: 3 (lower is better)
Translates to: TICFLAVSSEQL*DEAPPFFLSTL
Trigger: TAGAGTGGATAGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGAAACTGCTAGAAAGCAGATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR CCA 72 bp ACTCTGAGCCACCGCACTATGAATTCCAAGCCACTCTaGCTGGAGTTAGCTCAATTTAAGTACCAAAAAGAT +
Preference number: 3 (lower is better)
Translates to: TLSHRTMNSKPL*LELAQFKYQKD
Trigger: ATCTTTTTGGTACTTAAATTGAGCTAACTCCAGCCAGAGTGGCTTGGAATTCATAGTGCGGTGGCTCAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR TCA 72 bp GTAGTGATCCAGAGCTTCACATATTCCCTTCACCTCTaGGGTACTAATGACCATTTCCTTGAATGGATTATG +
Preference number: 3 (lower is better)
Translates to: VVIQSFTYSLHL*GTNDHFLEWIM
Trigger: CATAATCCATTCAAGGAAATGGTCATTAGTACCTCAGAGGTGAAGGGAATATGTGAAGCTCTGGATCACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR-3UTR CAA 90 bp GGATTTTACATCCTCCACAGTCATGTAAGCCAGTTCCTCAAAATGAATCTTTCTCCTCCTCTTTTGGGTTaGCCTTACTTTTGTCACCAT +
Preference number: 3 (lower is better)
Translates to: GFYILHSHVSQFLKMNLSPPLLG*PYFCHH
Trigger: ATGGTGACAAAAGTAAGGCAAACCCAAAAGAGGAGG...AGAAAGATTCATTTTGAGGAACTGGCTTACATGACTGTGGAGGATGTAAAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR CCA 72 bp TTTCAGTCATTCAACAACTATATGTTAAGGAGCTGCTaGTGCCAAGAACAATTCTGGCAAATGAGTGAAATA +
Preference number: 3 (lower is better)
Translates to: FQSFNNYMLRSC*CQEQFWQMSEI
Trigger: TATTTCACTCATTTGCCAGAATTGTTCTTGGCACCAGCAGCTCCTTAACATATAGTTGTTGAATGACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR GCA 72 bp AGTTCCGCATTGATTTGTGTAGTCTGTTTTGTAACATaGAAACTGCATGCAATCTTCTCAGGAAATTCATTT +
Preference number: 3 (lower is better)
Translates to: SSALICVVCFVT*KLHAIFSGNSF
Trigger: AAATGAATTTCCTGAGAAGATTGCATGCAGTTTGCATGTTACAAAACAGACTACACAAATCAATGCGGAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
3UTR GCA 72 bp ATTGTCTTGAACATACCCTTTTCTTGTGCAACTTCTTaGTTTGAGCATGATTTTAAATGGCGTATGTGTATA +
Preference number: 3 (lower is better)
Translates to: IVLNIPFSCATS*FEHDFKWRMCI
Trigger: TATACACATACGCCATTTAAAATCATGCTCAAAGCAAGAAGTTGCACAAGAAAAGGGTATGTTCAAGACAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR GCA 90 bp CAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGTCGAGGAGGCTAAGCTaGTCTCGCCTCCCCACCCCG +
Preference number: 4 (lower is better)
Translates to: QHVPAGADGWTTASSSKMSRRLS*SRLPTP
Trigger: CGGGGTGGGGAGGCGAGAGCAGCTTAGCCTCCTCGA...CATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp ACAAGCAAGCGGAGGCTCTTCACTGACGGTGACTCACTGGCAGCTCCACACACCCGAGGGCCGGGAGGCTaGTACCTAGCACCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: TSKRRLFTDGDSLAAPHTRGPGG*YLAPAA
Trigger: TGCAGCAGGTGCTAGGTAGCAGCCTCCCGGCCCTCG...GGTGTGTGGAGCTGCCAGTGAGTCACCGTCAGTGAAGAGCCTCCGCTTGCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR GCA 90 bp GCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCGAGGGCCGGGAGGCTaGTACCTAGCACCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: ALMGGPQLAAPRWHLSRLRGPGG*YLAPAA
Trigger: TGCAGCAGGTGCTAGGTAGCAGCCTCCCGGCCCTCG...CAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGCGAGGGCCGGGAGGCTaGTACCTAGCACCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQRGPGG*YLAPAA
Trigger: TGCAGCAGGTGCTAGGTAGCAGCCTCCCGGCCCTCG...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp GATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTCATCATCCGCGAGGGCCGGGAGGCTaGTACCTAGCACCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: DGISHVCCLAGPQVSHHPRGPGG*YLAPAA
Trigger: TGCAGCAGGTGCTAGGTAGCAGCCTCCCGGCCCTCG...CGGATGATGAGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp GATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTCGAGGAGGCTAAGCTaGTCTCGCCTCCCCACCCCG +
Preference number: 4 (lower is better)
Translates to: DGWTTASSSKMASLTSAASRRLS*SRLPTP
Trigger: CGGGGTGGGGAGGCGAGAGCAGCTTAGCCTCCTCGA...AGCAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACACGAGGGCCGGGAGGCTaGTACCTAGCACCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTRGPGG*YLAPAA
Trigger: TGCAGCAGGTGCTAGGTAGCAGCCTCCCGGCCCTCG...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp AGGAGATCTGCTGCGTGCCGCAGGATGGAAAGCAGAGGGTTAATTCCGACTCCTTCGAGGAGGCTAAGCTaGTCTCGCCTCCCCACCCCG +
Preference number: 4 (lower is better)
Translates to: RRSAACRRMESRGLIPTPSRRLS*SRLPTP
Trigger: CGGGGTGGGGAGGCGAGAGCAGCTTAGCCTCCTCGA...AGGAGTCGGAATTAACCCTCTGCTTTCCATCCTGCGGCACGCAGCAGATCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR GCA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATCGAGGAGGCTAAGCTaGTCTCGCCTCCCCACCCCG +
Preference number: 4 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTSRRLS*SRLPTP
Trigger: CGGGGTGGGGAGGCGAGAGCAGCTTAGCCTCCTCGA...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp CAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGCTCTCTGAGGAGATCTaGTGCGTGCCGCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: QHVPAGADGWTTASSSKMLSEEI*CVPQDG
Trigger: TCCATCCTGCGGCACGCAGCAGATCTCCTCAGAGAG...CATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp CAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGCAGCAGCACAGGCCATaGCGCTTTCTGGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: QHVPAGADGWTTASSSKMQQHRP*RFLGKQ
Trigger: CTGTTTGCCCAGAAAGCGCCATGGCCTGTGCTGCTG...CATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435829.6
CDS-3UTR CCA 90 bp CAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGCAGGCGCTGATGGGTaGACCACAGCTAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QLAAPRWHLSRLLLSRATAGADG*TTASSS
Trigger: GGAGCTGCTAGCTGTGGTCCACCCATCAGCGCCTGC...TGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR TCA 90 bp GGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTTGTTTGCCTGCTCTCTaGGGAGATCTGCTGCGTGCC +
Preference number: 4 (lower is better)
Translates to: GADGWTTASSSKMASLTSCLPAL*GDLLRA
Trigger: GGCACGCAGCAGATCTCCTCAGAGAGCAGGCAAACA...AGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp GATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTCATCATCCGCTGCTACCTAGCACCTaGTGCAGCCTTCAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: DGISHVCCLAGPQVSHHPLLPST*CSLQRA
Trigger: AGCCCGCTGAAGGCTGCAGCAGGTGCTAGGTAGCAG...CGGATGATGAGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp ACTAATCTCAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTAGCAGCTCTGCTACCTAGCACCTaGTGCAGCCTTCAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: TNLSMCLQALMGGPQLAALLPST*CSLQRA
Trigger: AGCCCGCTGAAGGCTGCAGCAGGTGCTAGGTAGCAG...AGCTGCTAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp CCGCAGGATGGAAAGCAGAGGGTTAATTCCGACTCCTCCTGCAATCAACACGAGTCGAGGAGGCTAAGCTaGTCTCGCCTCCCCACCCCG +
Preference number: 4 (lower is better)
Translates to: PQDGKQRVNSDSSCNQHESRRLS*SRLPTP
Trigger: CGGGGTGGGGAGGCGAGAGCAGCTTAGCCTCCTCGA...CTCGTGTTGATTGCAGGAGGAGTCGGAATTAACCCTCTGCTTTCCATCCTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR GCA 90 bp CAGCAACAAGCAAGCGGAGGCTCTTCACTGACGGTGACTCACTGGCAGCTCCACCTCTCTGAGGAGATCTaGTGCGTGCCGCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: QQQASGGSSLTVTHWQLHLSEEI*CVPQDG
Trigger: TCCATCCTGCGGCACGCAGCAGATCTCCTCAGAGAG...GTGGAGCTGCCAGTGAGTCACCGTCAGTGAAGAGCCTCCGCTTGCTTGTTGCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR CCA 90 bp GCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGGGAAACTTTCCCCGCTaGCACCTAGCTTGCAGACCC +
Preference number: 4 (lower is better)
Translates to: ALMGGPQLAAPRWHLSRLGNFPR*HLACRP
Trigger: GGGTCTGCAAGCTAGGTGCCAGCGGGGAAAGTTTCC...CAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGCCTATGCCCTCAGCCTaGGCACTTTGGGGCCAACTG +
Preference number: 4 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQPMPSA*ALWGQL
Trigger: CAGTTGGCCCCAAAGTGCCCAGGCTGAGGGCATAGG...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp GGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTAGTGTACACGTATTGTaGACCCAGAGGGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GADGWTTASSSKMASLTSSVHVL*TQRAGG
Trigger: CCCTCCTGCCCTCTGGGTTCACAATACGTGTACACT...AGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR TCA 90 bp ACAAGCAAGCGGAGGCTCTTCACTGACGGTGACTCACTGGCAGCTCCACACACCGAGGCATCCGCAGGCTaGGGGTCAAAGAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: TSKRRLFTDGDSLAAPHTEASAG*GSKKNS
Trigger: AGAGTTCTTCTTTGACCCTCAGCCTGCGGATGCCTC...GGTGTGTGGAGCTGCCAGTGAGTCACCGTCAGTGAAGAGCCTCCGCTTGCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR TCA 90 bp CAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTTGTTTGCCTGCTCTCTaGGGAGATCTGCTGCGTGCC +
Preference number: 4 (lower is better)
Translates to: QLQDGISHVCCLAGPQVSCLPAL*GDLLRA
Trigger: GGCACGCAGCAGATCTCCTCAGAGAGCAGGCAAACA...AGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR TCA 90 bp GAAGCTAGAGTCACCTTCAGGTCCCATGAATCATATCTGTTCAAGCCCACAAGTCCGCGGTCCCAGACGTaGCGTAGCAGCGCGGGCGAG +
Preference number: 4 (lower is better)
Translates to: EARVTFRSHESYLFKPTSPRSQT*RSSAGE
Trigger: CTCGCCCGCGCTGCTACGTCACGTCTGGGACCGCGG...ACTTGTGGGCTTGAACAGATATGATTCATGGGACCTGAAGGTGACTCTAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627468.2
CDS-3UTR GCA 90 bp GGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTCTACCTAGCACCTGCTaGAGCCTTCAGCGGGCTATT +
Preference number: 4 (lower is better)
Translates to: GADGWTTASSSKMASLTSLPSTC*SLQRAI
Trigger: AATAGCCCGCTGAAGGCTGCAGCAGGTGCTAGGTAG...AGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGCCGGCCACGTTTAGTTaGAGGCGCCTGGAATACTCC +
Preference number: 4 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQPATFS*RRLEYS
Trigger: GGAGTATTCCAGGCGCCTGCAACTAAACGTGGCCGG...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627468.2
CDS-3UTR CCA 90 bp CAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTGGAAACTTTCCCCGCTaGCACCTAGCTTGCAGACCC +
Preference number: 4 (lower is better)
Translates to: QLQDGISHVCCLAGPQVSGNFPR*HLACRP
Trigger: GGGTCTGCAAGCTAGGTGCCAGCGGGGAAAGTTTCC...AGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACACCTATGCCCTCAGCCTaGGCACTTTGGGGCCAACTG +
Preference number: 4 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTPMPSA*ALWGQL
Trigger: CAGTTGGCCCCAAAGTGCCCAGGCTGAGGGCATAGG...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp CAAGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTCATCATGCAGGCGCTGATGGGTaGACCACAGCTAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QDGISHVCCLAGPQVSHHAGADG*TTASSS
Trigger: GGAGCTGCTAGCTGTGGTCCACCCATCAGCGCCTGC...ATGATGAGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR TCA 90 bp GAGGAGATCTGCTGCGTGCCGCAGGATGGAAAGCAGAGGGTTAATTCCGACTCCAGTGTACACGTATTGTaGACCCAGAGGGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: EEICCVPQDGKQRVNSDSSVHVL*TQRAGG
Trigger: CCCTCCTGCCCTCTGGGTTCACAATACGTGTACACT...GGAGTCGGAATTAACCCTCTGCTTTCCATCCTGCGGCACGCAGCAGATCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR TCA 90 bp ACTAATCTCAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTAGCAGCTGAGGCATCCGCAGGCTaGGGGTCAAAGAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: TNLSMCLQALMGGPQLAAEASAG*GSKKNS
Trigger: AGAGTTCTTCTTTGACCCTCAGCCTGCGGATGCCTC...AGCTGCTAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR TCA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATGTTTGCCTGCTCTCTaGGGAGATCTGCTGCGTGCC +
Preference number: 4 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTCLPAL*GDLLRA
Trigger: GGCACGCAGCAGATCTCCTCAGAGAGCAGGCAAACA...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGCCCTTCACCCTCCTGTaGTCTCTATGCAGGCAACCT +
Preference number: 4 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQPFTLL*SLCRQP
Trigger: AGGTTGCCTGCATAGAGATCACAGGAGGGTGAAGGG...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp GCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTCTACCTAGCACCTGCTaGAGCCTTCAGCGGGCTATT +
Preference number: 4 (lower is better)
Translates to: ADGWTTASSSKMASLTSALPSTC*SLQRAI
Trigger: AATAGCCCGCTGAAGGCTGCAGCAGGTGCTAGGTAG...AGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCCTGCTACCTAGCACCTaGTGCAGCCTTCAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLALLPST*CSLQRA
Trigger: AGCCCGCTGAAGGCTGCAGCAGGTGCTAGGTAGCAG...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp GATCTCTATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCTCGAGGAGGCTAAGCTaGTCTCGCCTCCCCACCCCG +
Preference number: 4 (lower is better)
Translates to: DLYAGNLGPRTTCHKRNGSRRLS*SRLPTP
Trigger: CGGGGTGGGGAGGCGAGAGCAGCTTAGCCTCCTCGA...GCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAGAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGAGGAGATCTGCTGCGTaGCGCAGGATGGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQRRSAA*RRMESR
Trigger: TCTGCTTTCCATCCTGCGGCACGCAGCAGATCTCCT...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp CAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTAGGAGATCTGCTGCGTaGCGCAGGATGGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: QLQDGISHVCCLAGPQVSRRSAA*RRMESR
Trigger: TCTGCTTTCCATCCTGCGGCACGCAGCAGATCTCCT...AGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp ACTAATCTCAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTAGCAGCTAGGAGATCTGCTGCGTaGCGCAGGATGGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: TNLSMCLQALMGGPQLAARRSAA*RRMESR
Trigger: TCTGCTTTCCATCCTGCGGCACGCAGCAGATCTCCT...AGCTGCTAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp ACTAATCTCAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTAGCAGCTTCTGAGGAGATCTGCTaGGTGCCGCAGGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: TNLSMCLQALMGGPQLAASEEIC*VPQDGK
Trigger: CTTTCCATCCTGCGGCACGCAGCAGATCTCCTCAGA...AGCTGCTAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACACACAGCCAGCCGTGGTaGTGGCTAAACCGAGACAGT +
Preference number: 4 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTHSQPW*WLNRDS
Trigger: ACTGTCTCGGTTTAGCCAGCACCACGGCTGGCTGTG...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTCATCATCCGCAGCCTCAATACGGATaGCTCCAACAGAGCACCGCA +
Preference number: 4 (lower is better)
Translates to: DGISHVCCLAGPQVSHHPQPQYG*LQQSTA
Trigger: TGCGGTGCTCTGTTGGAGCCATCCGTATTGAGGCTG...CGGATGATGAGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp GAGGAGATCTGCTGCGTGCCGCAGGATGGAAAGCAGAGGGTTAATTCCGACTCCCAGCCTCAATACGGATaGCTCCAACAGAGCACCGCA +
Preference number: 4 (lower is better)
Translates to: EEICCVPQDGKQRVNSDSQPQYG*LQQSTA
Trigger: TGCGGTGCTCTGTTGGAGCCATCCGTATTGAGGCTG...GGAGTCGGAATTAACCCTCTGCTTTCCATCCTGCGGCACGCAGCAGATCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CCA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGAGATCTGGACAGGCCTaGCAGGCAAGAGCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQRSGQA*QARARG
Trigger: TCCTCTTGCTCTTGCCTGCCAGGCCTGTCCAGATCT...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACACAGGAATTAACAAGCTaGCCGTCGCCCTGGGCTCAA +
Preference number: 4 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTQELTS*PSPWAQ
Trigger: TTGAGCCCAGGGCGACGGTCAGCTTGTTAATTCCTG...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp AGGAAATCGACTAATCTCAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGGGTGGCGCAAAGTGCTaGGTGTCAATCTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: RKSTNLSMCLQALMGGPQGGAKC*VSISVT
Trigger: CGTCACTGAGATTGACACTCAGCACTTTGCGCCACC...CTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGTCGATTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR TCA 90 bp AGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTCATCATCCGAGGCATCCGCAGGCTaGGGGTCAAAGAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: RWHLSRLLLSRATGLSSSEASAG*GSKKNS
Trigger: AGAGTTCTTCTTTGACCCTCAGCCTGCGGATGCCTC...GGATGATGAGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp AACCCAGAGGGCAGGAGGGTGGTTCGTATATTTCACTGCCAATTCTATCACTCTCGAGGGCCGGGAGGCTaGTACCTAGCACCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: NPEGRRVVRIFHCQFYHSRGPGG*YLAPAA
Trigger: TGCAGCAGGTGCTAGGTAGCAGCCTCCCGGCCCTCG...AGAGTGATAGAATTGGCAGTGAAATATACGAACCACCCTCCTGCCCTCTGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR GCA 90 bp GCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCCGTCGAAGGACACTTaGAGTTCTCTCCATGTGATC +
Preference number: 4 (lower is better)
Translates to: ALMGGPQLAAPRWHLSRLPSKDT*SSLHVI
Trigger: GATCACATGGAGAGAACTGCAAGTGTCCTTCGACGG...CAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp AAATCGACTAATCTCAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTACTCTCTGAGGAGATCTaGTGCGTGCCGCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: KSTNLSMCLQALMGGPQLLSEEI*CVPQDG
Trigger: TCCATCCTGCGGCACGCAGCAGATCTCCTCAGAGAG...TAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGTCGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp CAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTCAGCAGCACAGGCCATaGCGCTTTCTTAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: QLQDGISHVCCLAGPQVSQQHRP*RFLRSP
Trigger: TGGACTTCTAAGAAAGCGCCATGGCCTGTGCTGCTG...AGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605932.5
CDS-3UTR CCA 90 bp CAGCAACAAGCAAGCGGAGGCTCTTCACTGACGGTGACTCACTGGCAGCTCCACCTGGTTAGAGTAAGGTaGCGCAAAGTGCTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: QQQASGGSSLTVTHWQLHLVRVR*RKVLSV
Trigger: GACACTCAGCACTTTGCGCCACCTTACTCTAACCAG...GTGGAGCTGCCAGTGAGTCACCGTCAGTGAAGAGCCTCCGCTTGCTTGTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR CCA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGCATCCCATGCTGCACTaGAGATGCTCACTTTGCACC +
Preference number: 4 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQHPMLH*RCSLCT
Trigger: GGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATG...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATCCTTGGCACACAGCCAGCCGTaGTGCTGGCTAAACCGAGAC +
Preference number: 4 (lower is better)
Translates to: ADCLHQLVDVPLDNPTSLAHSQP*CWLNRD
Trigger: GTCTCGGTTTAGCCAGCACCACGGCTGGCTGTGTGC...CAAGGATGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp TCTTCCCATCCCATGCTGCACTGGAGATGCTCACTTTGCACCTCCACTCCTAATGCACACAGCCAGCCGTaGTGCTGGCTAAACCGAGAC +
Preference number: 4 (lower is better)
Translates to: SSHPMLHWRCSLCTSTPNAHSQP*CWLNRD
Trigger: GTCTCGGTTTAGCCAGCACCACGGCTGGCTGTGTGC...ATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACAAGATCTGGACAGGCCTaGCAGGCAAGAGCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTRSGQA*QARARG
Trigger: TCCTCTTGCTCTTGCCTGCCAGGCCTGTCCAGATCT...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCTTAGTTGCAGGCGCCTaGAATACTCCGCGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLALVAGA*NTPRSQ
Trigger: CTGGGACCGCGGAGTATTCCAGGCGCCTGCAACTAA...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627468.2
CDS-3UTR TCA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACAACACACCTTAGCTGCTaGCACAATCTCCCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTTHLSC*HNLPSK
Trigger: CTTCGACGGGAGATTGTGTCAGCAGCTAAGGTGTGT...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp AGGAAATCGACTAATCTCAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGACACACCTTAGCTGCTaGCACAATCTCCCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: RKSTNLSMCLQALMGGPQTHLSC*HNLPSK
Trigger: CTTCGACGGGAGATTGTGTCAGCAGCTAAGGTGTGT...CTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGTCGATTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR TCA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGATGGCACTGAAAGGATaGACACTCCAGGCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQMALKG*TLQAKV
Trigger: CACCTTTGCCTGGAGTGTTCATCCTTTCAGTGCCAT...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp AATCAACACGAGGTTTCTAGAGGCATCCGCAGGCTGAGGGTCAAAGAAGAACTCCTGCTACCTAGCACCTaGTGCAGCCTTCAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: NQHEVSRGIRRLRVKEELLLPST*CSLQRA
Trigger: AGCCCGCTGAAGGCTGCAGCAGGTGCTAGGTAGCAG...GAGTTCTTCTTTGACCCTCAGCCTGCGGATGCCTCTAGAAACCTCGTGTTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR GCA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGCCGTCGAAGGACACTTaGAGTTCTCTCCATGTGATC +
Preference number: 4 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQPSKDT*SSLHVI
Trigger: GATCACATGGAGAGAACTGCAAGTGTCCTTCGACGG...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCTCTGAGGAGATCTGCTaGGTGCCGCAGGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLASEEIC*VPQDGK
Trigger: CTTTCCATCCTGCGGCACGCAGCAGATCTCCTCAGA...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp GCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATCCTTGCTCTCTGAGGAGATCTaGTGCGTGCCGCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: ADCLHQLVDVPLDNPTSLLSEEI*CVPQDG
Trigger: TCCATCCTGCGGCACGCAGCAGATCTCCTCAGAGAG...CAAGGATGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp TCTTCCCATCCCATGCTGCACTGGAGATGCTCACTTTGCACCTCCACTCCTAATCTCTCTGAGGAGATCTaGTGCGTGCCGCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: SSHPMLHWRCSLCTSTPNLSEEI*CVPQDG
Trigger: TCCATCCTGCGGCACGCAGCAGATCTCCTCAGAGAG...ATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGATGCTGCACTGGAGATaGTCACTTTGCACCTCCACT +
Preference number: 4 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQMLHWR*SLCTST
Trigger: AGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCAT...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp TCTTCCCATCCCATGCTGCACTGGAGATGCTCACTTTGCACCTCCACTCCTAATCACAGCCAGCCGTGGTaGTGGCTAAACCGAGACAGT +
Preference number: 4 (lower is better)
Translates to: SSHPMLHWRCSLCTSTPNHSQPW*WLNRDS
Trigger: ACTGTCTCGGTTTAGCCAGCACCACGGCTGGCTGTG...ATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp AAATCGACTAATCTCAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTACAGCCTCAATACGGATaGCTCCAACAGAGCACCGCA +
Preference number: 4 (lower is better)
Translates to: KSTNLSMCLQALMGGPQLQPQYG*LQQSTA
Trigger: TGCGGTGCTCTGTTGGAGCCATCCGTATTGAGGCTG...TAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGTCGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp GCCACCTGCACACCTCAGCTCATTCCAGGCTCAACATTCCTCCTCTTTTGGGTTCAGCCTCAATACGGATaGCTCCAACAGAGCACCGCA +
Preference number: 4 (lower is better)
Translates to: ATCTPQLIPGSTFLLFWVQPQYG*LQQSTA
Trigger: TGCGGTGCTCTGTTGGAGCCATCCGTATTGAGGCTG...AACCCAAAAGAGGAGGAATGTTGAGCCTGGAATGAGCTGAGGTGTGCAGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp ATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTCAGAGGGCAGGAGGGTaGTTCGTATATTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: MGGPQLAAPRWHLSRLLLQRAGG*FVYFTA
Trigger: GGCAGTGAAATATACGAACCACCCTCCTGCCCTCTG...AAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp CAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGTCCTTCCGTGATGTATaGCTTGAGTTCCGCATTGAT +
Preference number: 4 (lower is better)
Translates to: QHVPAGADGWTTASSSKMSFRDV*LEFRID
Trigger: ATCAATGCGGAACTCAAGCCATACATCACGGAAGGA...CATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp TCATCAGAGCAGCTTTGGGATGAGGCTCCACCATTCTTTCTATCCACTCTAGGGAGCCAGCCGTGGTGCTaGCTAAACCGAGACAGTGGG +
Preference number: 4 (lower is better)
Translates to: SSEQLWDEAPPFFLSTLGSQPWC*LNRDSG
Trigger: CCCACTGTCTCGGTTTAGCCAGCACCACGGCTGGCT...CCCTAGAGTGGATAGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GCCCAGGCACTGAAGGCAGATTCAACATGGAACACATCACCAATGCCTTTGTCCGGTGGCAGGCATAGCTaGGCAGGACAGATGACCCTT +
Preference number: 4 (lower is better)
Translates to: AQALKADSTWNTSPMPLSGGRHS*AGQMTL
Trigger: AAGGGTCATCTGTCCTGCCCAGCTATGCCTGCCACC...GGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp TCTTCCCATCCCATGCTGCACTGGAGATGCTCACTTTGCACCTCCACTCCTAATGGTGGCAGGCATAGCTaGGCAGGACAGATGACCCTT +
Preference number: 4 (lower is better)
Translates to: SSHPMLHWRCSLCTSTPNGGRHS*AGQMTL
Trigger: AAGGGTCATCTGTCCTGCCCAGCTATGCCTGCCACC...ATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGGCAAAGGTGATGACCTaGCCCATCTCAGCAATTCTG +
Preference number: 4 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQAKVMT*PISAIL
Trigger: CAGAATTGCTGAGATGGGCCAGGTCATCACCTTTGC...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp TCTTCCCATCCCATGCTGCACTGGAGATGCTCACTTTGCACCTCCACTCCTAATCAGCAGCACAGGCCATaGCGCTTTCTGGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: SSHPMLHWRCSLCTSTPNQQHRP*RFLGKQ
Trigger: CTGTTTGCCCAGAAAGCGCCATGGCCTGTGCTGCTG...ATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627468.2
CDS-3UTR TCA 90 bp CAGAGGGTTAATTCCGACTCCTCCTGCAATCAACACGAGGTTTCTAGAGGCATCTGTTTGCCTGCTCTCTaGGGAGATCTGCTGCGTGCC +
Preference number: 4 (lower is better)
Translates to: QRVNSDSSCNQHEVSRGICLPAL*GDLLRA
Trigger: GGCACGCAGCAGATCTCCTCAGAGAGCAGGCAAACA...GATGCCTCTAGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATTAACCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR GCA 90 bp AGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTCATCATCCCCGTCGAAGGACACTTaGAGTTCTCTCCATGTGATC +
Preference number: 4 (lower is better)
Translates to: RWHLSRLLLSRATGLSSSPSKDT*SSLHVI
Trigger: GATCACATGGAGAGAACTGCAAGTGTCCTTCGACGG...GGATGATGAGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp TCTTCCCATCCCATGCTGCACTGGAGATGCTCACTTTGCACCTCCACTCCTAATAGGAGATCTGCTGCGTaGCGCAGGATGGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SSHPMLHWRCSLCTSTPNRRSAA*RRMESR
Trigger: TCTGCTTTCCATCCTGCGGCACGCAGCAGATCTCCT...ATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp AATCAACACGAGGTTTCTAGAGGCATCCGCAGGCTGAGGGTCAAAGAAGAACTCCTCTCTGAGGAGATCTaGTGCGTGCCGCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: NQHEVSRGIRRLRVKEELLSEEI*CVPQDG
Trigger: TCCATCCTGCGGCACGCAGCAGATCTCCTCAGAGAG...GAGTTCTTCTTTGACCCTCAGCCTGCGGATGCCTCTAGAAACCTCGTGTTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR GCA 90 bp CTGGAGCCAGCATGCCTGTATTTCTTGCCATGGGGCCATATTGAACTTTCCTCTCTCTCTGAGGAGATCTaGTGCGTGCCGCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: LEPACLYFLPWGHIELSSLSEEI*CVPQDG
Trigger: TCCATCCTGCGGCACGCAGCAGATCTCCTCAGAGAG...AGAGGAAAGTTCAATATGGCCCCATGGCAAGAAATACAGGCATGCTGGCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR GCA 90 bp CAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGTCCATTTCTTTTGTTTaGCTGCTCTCTGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: QHVPAGADGWTTASSSKMSISFV*LLSEEI
Trigger: GATCTCCTCAGAGAGCAGGCAAACAAAAGAAATGGA...CATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp GCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTTTTTCTGCCTTTGTCTaGCTCCTACCACCACTTCTC +
Preference number: 4 (lower is better)
Translates to: ADGWTTASSSKMASLTSAFSAFV*LLPPLL
Trigger: GAGAAGTGGTGGTAGGAGGCAGACAAAGGCAGAAAA...AGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp TCCGACTCCTCCTGCAATCAACACGAGGTTTCTAGAGGCATCCGCAGGCTGAGGTTTTCTGCCTTTGTCTaGCTCCTACCACCACTTCTC +
Preference number: 4 (lower is better)
Translates to: SDSSCNQHEVSRGIRRLRFSAFV*LLPPLL
Trigger: GAGAAGTGGTGGTAGGAGGCAGACAAAGGCAGAAAA...CCTCAGCCTGCGGATGCCTCTAGAAACCTCGTGTTGATTGCAGGAGGAGTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR GCA 90 bp CTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGTTTTCTGCCTTTGTCTaGCTCCTACCACCACTTCTC +
Preference number: 4 (lower is better)
Translates to: LMGGPQLAAPRWHLSRLLFSAFV*LLPPLL
Trigger: GAGAAGTGGTGGTAGGAGGCAGACAAAGGCAGAAAA...CAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp TCTTCCCATCCCATGCTGCACTGGAGATGCTCACTTTGCACCTCCACTCCTAATTCCTCCCCCGCAGACTaGCTTCACCAGTTAGTAGAC +
Preference number: 4 (lower is better)
Translates to: SSHPMLHWRCSLCTSTPNSSPAD*LHQLVD
Trigger: GTCTACTAACTGGTGAAGGCAGTCTGCGGGGGAGGA...ATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACACTTCCCATCCCATGCTaGACTGGAGATGCTCACTTT +
Preference number: 4 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTLPIPC*TGDAHF
Trigger: AAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAG...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp AGGAGATCTGCTGCGTGCCGCAGGATGGAAAGCAGAGGGTTAATTCCGACTCCTCTGGTTAGAGTAAGGTaGCGCAAAGTGCTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: RRSAACRRMESRGLIPTPLVRVR*RKVLSV
Trigger: GACACTCAGCACTTTGCGCCACCTTACTCTAACCAG...AGGAGTCGGAATTAACCCTCTGCTTTCCATCCTGCGGCACGCAGCAGATCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CCA 90 bp AGGAAATCGACTAATCTCAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTGGTTAGAGTAAGGTaGCGCAAAGTGCTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: RKSTNLSMCLQALMGGPQLVRVR*RKVLSV
Trigger: GACACTCAGCACTTTGCGCCACCTTACTCTAACCAG...CTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGTCGATTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCCAGAGGGCAGGAGGGTaGTTCGTATATTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLAQRAGG*FVYFTA
Trigger: GGCAGTGAAATATACGAACCACCCTCCTGCCCTCTG...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp AAATCGACTAATCTCAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTACAGAGGGCAGGAGGGTaGTTCGTATATTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: KSTNLSMCLQALMGGPQLQRAGG*FVYFTA
Trigger: GGCAGTGAAATATACGAACCACCCTCCTGCCCTCTG...TAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGTCGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp AACATCGACTCCTGCTGGAATATCCAGCCTGCTGGGCTACCCTGCAAACTTTGGCAGAGGGCAGGAGGGTaGTTCGTATATTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: NIDSCWNIQPAGLPCKLWQRAGG*FVYFTA
Trigger: GGCAGTGAAATATACGAACCACCCTCCTGCCCTCTG...CCAAAGTTTGCAGGGTAGCCCAGCAGGCTGGATATTCCAGCAGGAGTCGATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCGCTAAACCGAGACAGTaGGCGACACCTCCCTATCTT +
Preference number: 4 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLAAKPRQ*ATPPYL
Trigger: AAGATAGGGAGGTGTCGCCCACTGTCTCGGTTTAGC...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACAGCAAAGGTGATGACCTaGCCCATCTCAGCAATTCTG +
Preference number: 4 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTAKVMT*PISAIL
Trigger: CAGAATTGCTGAGATGGGCCAGGTCATCACCTTTGC...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACAAGTACCAAAAAGATCTaGACAGGCCTGGCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTSTKKI*TGLAGK
Trigger: CTTGCCTGCCAGGCCTGTCCAGATCTTTTTGGTACT...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp CAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTGGCCATGGCGCTTTCTaGGCAAACAGAAAACTTAGA +
Preference number: 4 (lower is better)
Translates to: QLQDGISHVCCLAGPQVSGHGAF*ANRKLR
Trigger: TCTAAGTTTTCTGTTTGCCCAGAAAGCGCCATGGCC...AGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435829.6
CDS-3UTR CCA 90 bp GGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTCCCAAACAGGTCAGCTaGGTGATTTTTCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: GADGWTTASSSKMASLTSPKQVS*VIFPST
Trigger: AGTTGAAGGAAAAATCACCCAGCTGACCTGTTTGGG...AGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
3UTR CAA 72 bp TCCCTTCACCCTCCTGTGATCTCTATGCAGGCAACCTaGGGCCCAGGACTACTTGTCATAAAAGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: SLHPPVISMQAT*GPGLLVIKGMA
Trigger: GGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAGAGATCACAGGAGGGTGAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
3UTR CAA 72 bp CAGTTAGTAGACGTGCCCCTTGATAATCCCACATCCTaGCATCTCATCATGCTCCTATGCCCTCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QLVDVPLDNPTS*HLIMLLCPQPG
Trigger: CCCAGGCTGAGGGCATAGGAGCATGATGAGATGCAAGGATGTGGGATTATCAAGGGGCACGTCTACTAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp GATCTCTATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCGGTGGCGCAAAGTGCTaGGTGTCAATCTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: DLYAGNLGPRTTCHKRNGGGAKC*VSISVT
Trigger: CGTCACTGAGATTGACACTCAGCACTTTGCGCCACC...GCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAGAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp GATCTCTATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCAGTGTACACGTATTGTaGACCCAGAGGGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: DLYAGNLGPRTTCHKRNGSVHVL*TQRAGG
Trigger: CCCTCCTGCCCTCTGGGTTCACAATACGTGTACACT...GCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAGAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp AACCCACCAACCACAGAGACTCCTGGAATAAAGAAATCAACCCACTGGCCAGCTAGTGTACACGTATTGTaGACCCAGAGGGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: NPPTTETPGIKKSTHWPASVHVL*TQRAGG
Trigger: CCCTCCTGCCCTCTGGGTTCACAATACGTGTACACT...AGCTGGCCAGTGGGTTGATTTCTTTATTCCAGGAGTCTCTGTGGTTGGTGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR TCA 90 bp TCATCAGAGCAGCTTTGGGATGAGGCTCCACCATTCTTTCTATCCACTCTAGGGCCCTTCACCCTCCTGTaGTCTCTATGCAGGCAACCT +
Preference number: 4 (lower is better)
Translates to: SSEQLWDEAPPFFLSTLGPFTLL*SLCRQP
Trigger: AGGTTGCCTGCATAGAGATCACAGGAGGGTGAAGGG...CCCTAGAGTGGATAGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp GAAGCTAGAGTCACCTTCAGGTCCCATGAATCATATCTGTTCAAGCCCACAAGTCTGCTACCTAGCACCTaGTGCAGCCTTCAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: EARVTFRSHESYLFKPTSLLPST*CSLQRA
Trigger: AGCCCGCTGAAGGCTGCAGCAGGTGCTAGGTAGCAG...ACTTGTGGGCTTGAACAGATATGATTCATGGGACCTGAAGGTGACTCTAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp TGTCTGCCTCCTACCACCACTTCTCAAAGCAAATGTGTTCTTTGGGTACATGGTCTGCTACCTAGCACCTaGTGCAGCCTTCAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: CLPPTTTSQSKCVLWVHGLLPST*CSLQRA
Trigger: AGCCCGCTGAAGGCTGCAGCAGGTGCTAGGTAGCAG...ACCATGTACCCAAAGAACACATTTGCTTTGAGAAGTGGTGGTAGGAGGCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR GCA 90 bp GCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGTTTCTTTTGTTTGCCTaGTCTCTGAGGAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: ALMGGPQLAAPRWHLSRLFLLFA*SLRRSA
Trigger: AGCAGATCTCCTCAGAGAGCAGGCAAACAAAAGAAA...CAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCTCCACTCTAGGGGACTaGCTCCCAATCTCAGACTTA +
Preference number: 4 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLASTLGD*LPISDL
Trigger: TAAGTCTGAGATTGGGAGGCAGTCCCCTAGAGTGGA...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp GCCCAGGCACTGAAGGCAGATTCAACATGGAACACATCACCAATGCCTTTGTCCCTCATCATGCTCCTATaGCCTCAGCCTGGGCACTTT +
Preference number: 4 (lower is better)
Translates to: AQALKADSTWNTSPMPLSLIMLL*PQPGHF
Trigger: AAAGTGCCCAGGCTGAGGGCATAGGAGCATGATGAG...GGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp GATCTCTATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCTCCTCCCCCGCAGACTaGCTTCACCAGTTAGTAGAC +
Preference number: 4 (lower is better)
Translates to: DLYAGNLGPRTTCHKRNGSSPAD*LHQLVD
Trigger: GTCTACTAACTGGTGAAGGCAGTCTGCGGGGGAGGA...GCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAGAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATGGAGATGCTCACTTTaGACCTCCACTCCTAATGCA +
Preference number: 4 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTWRCSL*TSTPNA
Trigger: TGCATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCA...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp GCCCAGGCACTGAAGGCAGATTCAACATGGAACACATCACCAATGCCTTTGTCCAGGACAGATGACCCTTaGTCTCTGACAGTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: AQALKADSTWNTSPMPLSRTDDP*SLTVAG
Trigger: GCCTGCTACTGTCAGAGAGCAAGGGTCATCTGTCCT...GGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp AACCCAGAGGGCAGGAGGGTGGTTCGTATATTTCACTGCCAATTCTATCACTCTCCGGCCACGTTTAGTTaGAGGCGCCTGGAATACTCC +
Preference number: 4 (lower is better)
Translates to: NPEGRRVVRIFHCQFYHSPATFS*RRLEYS
Trigger: GGAGTATTCCAGGCGCCTGCAACTAAACGTGGCCGG...AGAGTGATAGAATTGGCAGTGAAATATACGAACCACCCTCCTGCCCTCTGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR CCA 90 bp CCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGAGCTTCACATATTCCCTTGGAAACTTTCCCCGCTaGCACCTAGCTTGCAGACCC +
Preference number: 4 (lower is better)
Translates to: PTGKSGLLVVIQSFTYSLGNFPR*HLACRP
Trigger: GGGTCTGCAAGCTAGGTGCCAGCGGGGAAAGTTTCC...AAGGGAATATGTGAAGCTCTGGATCACTACAAGGAGCCCTGACTTACCAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp CCACCAACCACAGAGACTCCTGGAATAAAGAAATCAACCCACTGGCCAGCTTTAGGAAACTTTCCCCGCTaGCACCTAGCTTGCAGACCC +
Preference number: 4 (lower is better)
Translates to: PPTTETPGIKKSTHWPALGNFPR*HLACRP
Trigger: GGGTCTGCAAGCTAGGTGCCAGCGGGGAAAGTTTCC...TAAAGCTGGCCAGTGGGTTGATTTCTTTATTCCAGGAGTCTCTGTGGTTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CCA 90 bp GATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTGGATGTACAGCAGTTaGAACATGGACAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: DGWTTASSSKMASLTSAAWMYSS*NMDSFS
Trigger: GGAAAAGCTGTCCATGTTCCAACTGCTGTACATCCA...AGCAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp GATCTCTATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCAGCCTCAATACGGATaGCTCCAACAGAGCACCGCA +
Preference number: 4 (lower is better)
Translates to: DLYAGNLGPRTTCHKRNGQPQYG*LQQSTA
Trigger: TGCGGTGCTCTGTTGGAGCCATCCGTATTGAGGCTG...GCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAGAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp CAAGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTCATCATCTGGTTAGAGTAAGGTaGCGCAAAGTGCTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: QDGISHVCCLAGPQVSHHLVRVR*RKVLSV
Trigger: GACACTCAGCACTTTGCGCCACCTTACTCTAACCAG...ATGATGAGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp GGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTCTTGTTCTAGCAGTCTaGGACTGGAGCATATTGAAA +
Preference number: 4 (lower is better)
Translates to: GADGWTTASSSKMASLTSLVLAV*DWSILK
Trigger: TTTCAATATGCTCCAGTCCCAGACTGCTAGAACAAG...AGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp GCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGGTCTGTCATTGGAGGTaGGCCACAAATATAGAACAA +
Preference number: 4 (lower is better)
Translates to: ALMGGPQLAAPRWHLSRLVCHWR*ATNIEQ
Trigger: TTGTTCTATATTTGTGGCCCACCTCCAATGACAGAC...CAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp CAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGAAAAAGTCTGTCATTaGAGGTGGGCCACAAATATA +
Preference number: 4 (lower is better)
Translates to: QHVPAGADGWTTASSSKMEKVCH*RWATNI
Trigger: TATATTTGTGGCCCACCTCCAATGACAGACTTTTTC...CATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp CAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGTGTTCTTTGGGTACATaGTTGTTTTCCAGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: QHVPAGADGWTTASSSKMCSLGT*LFSSCL
Trigger: CAAGCAACTGGAAAACAACCATGTACCCAAAGAACA...CATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp GCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATCCTTGCTATGCAGGCAACCTTaGGCCCAGGACTACTTGTCA +
Preference number: 4 (lower is better)
Translates to: ADCLHQLVDVPLDNPTSLLCRQP*AQDYLS
Trigger: TGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAG...CAAGGATGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATCCTTGCATCCCATGCTGCACTaGAGATGCTCACTTTGCACC +
Preference number: 4 (lower is better)
Translates to: ADCLHQLVDVPLDNPTSLHPMLH*RCSLCT
Trigger: GGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATG...CAAGGATGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTCATCATCCGCCCAAACAGGTCAGCTaGGTGATTTTTCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: DGISHVCCLAGPQVSHHPPKQVS*VIFPST
Trigger: AGTTGAAGGAAAAATCACCCAGCTGACCTGTTTGGG...CGGATGATGAGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR TCA 90 bp GCCTCCAACTTTTATCTTAGGGTGACAAGTCCACCTGGAGCCAGCATGCCTGTAGAGTGTCAATCTCAGTaGCGCAGCCTCAATACGGAT +
Preference number: 4 (lower is better)
Translates to: ASNFYLRVTSPPGASMPVECQSQ*RSLNTD
Trigger: ATCCGTATTGAGGCTGCGTCACTGAGATTGACACTC...TACAGGCATGCTGGCTCCAGGTGGACTTGTCACCCTAAGATAAAAGTTGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR TCA 90 bp CAGAGGGCAGGAGGGTGGTTCGTATATTTCACTGCCAATTCTATCACTCTCTCTGGTGGCGCAAAGTGCTaGGTGTCAATCTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: QRAGGWFVYFTANSITLSGGAKC*VSISVT
Trigger: CGTCACTGAGATTGACACTCAGCACTTTGCGCCACC...AGAGAGAGTGATAGAATTGGCAGTGAAATATACGAACCACCCTCCTGCCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR TCA 90 bp CCACCAACCACAGAGACTCCTGGAATAAAGAAATCAACCCACTGGCCAGCTTTAGGTGGCGCAAAGTGCTaGGTGTCAATCTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: PPTTETPGIKKSTHWPALGGAKC*VSISVT
Trigger: CGTCACTGAGATTGACACTCAGCACTTTGCGCCACC...TAAAGCTGGCCAGTGGGTTGATTTCTTTATTCCAGGAGTCTCTGTGGTTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR TCA 90 bp CCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGAGCTTCACATATTCCCTTGAGGCATCCGCAGGCTaGGGGTCAAAGAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: PTGKSGLLVVIQSFTYSLEASAG*GSKKNS
Trigger: AGAGTTCTTCTTTGACCCTCAGCCTGCGGATGCCTC...AAGGGAATATGTGAAGCTCTGGATCACTACAAGGAGCCCTGACTTACCAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp GAAGCTAGAGTCACCTTCAGGTCCCATGAATCATATCTGTTCAAGCCCACAAGTTGTTTGCCTGCTCTCTaGGGAGATCTGCTGCGTGCC +
Preference number: 4 (lower is better)
Translates to: EARVTFRSHESYLFKPTSCLPAL*GDLLRA
Trigger: GGCACGCAGCAGATCTCCTCAGAGAGCAGGCAAACA...ACTTGTGGGCTTGAACAGATATGATTCATGGGACCTGAAGGTGACTCTAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp GCCCAGGCACTGAAGGCAGATTCAACATGGAACACATCACCAATGCCTTTGTCCAGAGCAGCTTTGGGATaGGGCTCCACCATTCTTTCT +
Preference number: 4 (lower is better)
Translates to: AQALKADSTWNTSPMPLSRAALG*GSTILS
Trigger: AGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCT...GGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp GCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATCCTTGAGAGCAGCTTTGGGATaGGGCTCCACCATTCTTTCT +
Preference number: 4 (lower is better)
Translates to: ADCLHQLVDVPLDNPTSLRAALG*GSTILS
Trigger: AGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCT...CAAGGATGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp GCCCAGGCACTGAAGGCAGATTCAACATGGAACACATCACCAATGCCTTTGTCCCAATTCTGCCAATACTaGGTCAGCAACAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: AQALKADSTWNTSPMPLSQFCQY*VSNRVA
Trigger: TGCCACCCTGTTGCTGACTCAGTATTGGCAGAATTG...GGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp GCCCAGGCACTGAAGGCAGATTCAACATGGAACACATCACCAATGCCTTTGTCCATGGCACTGAAAGGATaGACACTCCAGGCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: AQALKADSTWNTSPMPLSMALKG*TLQAKV
Trigger: CACCTTTGCCTGGAGTGTTCATCCTTTCAGTGCCAT...GGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp GCCACCTGCACACCTCAGCTCATTCCAGGCTCAACATTCCTCCTCTTTTGGGTTCATCTCATTCTAGGCTaGGGTGCATGTGTGTATACC +
Preference number: 4 (lower is better)
Translates to: ATCTPQLIPGSTFLLFWVHLILG*GACVYT
Trigger: GGTATACACACATGCACCTCAGCCTAGAATGAGATG...AACCCAAAAGAGGAGGAATGTTGAGCCTGGAATGAGCTGAGGTGTGCAGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR GCA 90 bp GCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTTTCTCACAAAGTTCCTaGAGCCAGGAATTAACAAGC +
Preference number: 4 (lower is better)
Translates to: ADGWTTASSSKMASLTSAFSQSS*SQELTS
Trigger: GCTTGTTAATTCCTGGCTGCAGGAACTTTGTGAGAA...AGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGTTCTCACAAAGTTCCTaGAGCCAGGAATTAACAAGC +
Preference number: 4 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQFSQSS*SQELTS
Trigger: GCTTGTTAATTCCTGGCTGCAGGAACTTTGTGAGAA...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp TTTGGGTTTGCCTTACTTTTGTCACCATCCCTGGAGGCTCAGGTACCCCCTTCTCCGTCGAAGGACACTTaGAGTTCTCTCCATGTGATC +
Preference number: 4 (lower is better)
Translates to: FGFALLLSPSLEAQVPPSPSKDT*SSLHVI
Trigger: GATCACATGGAGAGAACTGCAAGTGTCCTTCGACGG...AGAAGGGGGTACCTGAGCCTCCAGGGATGGTGACAAAAGTAAGGCAAACCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR GCA 90 bp AGGAAATCGACTAATCTCAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGAATTCCGACTCCTCCTaGAATCAACACGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: RKSTNLSMCLQALMGGPQNSDSS*NQHEVS
Trigger: AGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATT...CTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGTCGATTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp AACCCACTGGCCAGCTTTAAAGGAAAAGTCTTGATCAGCAACAAGCAAGCGGAGAGGAGATCTGCTGCGTaGCGCAGGATGGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: NPLASFKGKVLISNKQAERRSAA*RRMESR
Trigger: TCTGCTTTCCATCCTGCGGCACGCAGCAGATCTCCT...CTCCGCTTGCTTGTTGCTGATCAAGACTTTTCCTTTAAAGCTGGCCAGTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR GCA 90 bp GGAAAGCAGAGGGTTAATTCCGACTCCTCCTGCAATCAACACGAGGTTTCTAGAAGGAGATCTGCTGCGTaGCGCAGGATGGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GKQRVNSDSSCNQHEVSRRRSAA*RRMESR
Trigger: TCTGCTTTCCATCCTGCGGCACGCAGCAGATCTCCT...TCTAGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATTAACCCTCTGCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR GCA 90 bp GCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTTTTCTTTTGTTTGCCTaGTCTCTGAGGAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: ADGWTTASSSKMASLTSAFLLFA*SLRRSA
Trigger: AGCAGATCTCCTCAGAGAGCAGGCAAACAAAAGAAA...AGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp GCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTTCCATTTCTTTTGTTTaGCTGCTCTCTGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: ADGWTTASSSKMASLTSASISFV*LLSEEI
Trigger: GATCTCCTCAGAGAGCAGGCAAACAAAAGAAATGGA...AGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp GAGGAGATCTGCTGCGTGCCGCAGGATGGAAAGCAGAGGGTTAATTCCGACTCCTCCATTTCTTTTGTTTaGCTGCTCTCTGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: EEICCVPQDGKQRVNSDSSISFV*LLSEEI
Trigger: GATCTCCTCAGAGAGCAGGCAAACAAAAGAAATGGA...GGAGTCGGAATTAACCCTCTGCTTTCCATCCTGCGGCACGCAGCAGATCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR GCA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCTTTTCTGCCTTTGTCTaGCTCCTACCACCACTTCTC +
Preference number: 4 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLAFSAFV*LLPPLL
Trigger: GAGAAGTGGTGGTAGGAGGCAGACAAAGGCAGAAAA...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp GCCCAGGCACTGAAGGCAGATTCAACATGGAACACATCACCAATGCCTTTGTCCTCCACTCTAGGGGACTaGCTCCCAATCTCAGACTTA +
Preference number: 4 (lower is better)
Translates to: AQALKADSTWNTSPMPLSSTLGD*LPISDL
Trigger: TAAGTCTGAGATTGGGAGGCAGTCCCCTAGAGTGGA...GGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp GATCTCTATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTCATCATGCTCCTATaGCCTCAGCCTGGGCACTTT +
Preference number: 4 (lower is better)
Translates to: DLYAGNLGPRTTCHKRNGLIMLL*PQPGHF
Trigger: AAAGTGCCCAGGCTGAGGGCATAGGAGCATGATGAG...GCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAGAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp GCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATCCTTGCTTCCCATCCCATGCTaGACTGGAGATGCTCACTTT +
Preference number: 4 (lower is better)
Translates to: ADCLHQLVDVPLDNPTSLLPIPC*TGDAHF
Trigger: AAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAG...CAAGGATGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp TCCTTAGTTGCCTCCAACTTTTATCTTAGGGTGACAAGTCCACCTGGAGCCAGCCTGGAATATCCAGCCTaGTGGGCTACCCTGCAAACT +
Preference number: 4 (lower is better)
Translates to: SLVASNFYLRVTSPPGASLEYPA*WATLQT
Trigger: AGTTTGCAGGGTAGCCCAGCAGGCTGGATATTCCAG...GCTGGCTCCAGGTGGACTTGTCACCCTAAGATAAAAGTTGGAGGCAACTAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp ACTAATCTCAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTAGCAGCTACAGCAGTTGGAACATaGACAGCTTTTCCATGCATT +
Preference number: 4 (lower is better)
Translates to: TNLSMCLQALMGGPQLAATAVGT*TAFPCI
Trigger: AATGCATGGAAAAGCTGTCCATGTTCCAACTGCTGT...AGCTGCTAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp AGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTCATCATCCTGGATGTACAGCAGTTaGAACATGGACAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: RWHLSRLLLSRATGLSSSWMYSS*NMDSFS
Trigger: GGAAAAGCTGTCCATGTTCCAACTGCTGTACATCCA...GGATGATGAGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp TCATCAGAGCAGCTTTGGGATGAGGCTCCACCATTCTTTCTATCCACTCTAGGGCAGCAGCACAGGCCATaGCGCTTTCTTAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: SSEQLWDEAPPFFLSTLGQQHRP*RFLRSP
Trigger: TGGACTTCTAAGAAAGCGCCATGGCCTGTGCTGCTG...CCCTAGAGTGGATAGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285083.10
CDS-3UTR CCA 90 bp AACCCACCAACCACAGAGACTCCTGGAATAAAGAAATCAACCCACTGGCCAGCTCAGCAGCACAGGCCATaGCGCTTTCTTAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: NPPTTETPGIKKSTHWPAQQHRP*RFLRSP
Trigger: TGGACTTCTAAGAAAGCGCCATGGCCTGTGCTGCTG...AGCTGGCCAGTGGGTTGATTTCTTTATTCCAGGAGTCTCTGTGGTTGGTGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CCA 90 bp AACCCACTGGCCAGCTTTAAAGGAAAAGTCTTGATCAGCAACAAGCAAGCGGAGCAGCCTCAATACGGATaGCTCCAACAGAGCACCGCA +
Preference number: 4 (lower is better)
Translates to: NPLASFKGKVLISNKQAEQPQYG*LQQSTA
Trigger: TGCGGTGCTCTGTTGGAGCCATCCGTATTGAGGCTG...CTCCGCTTGCTTGTTGCTGATCAAGACTTTTCCTTTAAAGCTGGCCAGTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CCA 90 bp TCTTCCCATCCCATGCTGCACTGGAGATGCTCACTTTGCACCTCCACTCCTAATCTGGTTAGAGTAAGGTaGCGCAAAGTGCTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: SSHPMLHWRCSLCTSTPNLVRVR*RKVLSV
Trigger: GACACTCAGCACTTTGCGCCACCTTACTCTAACCAG...ATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GCCCAGGCACTGAAGGCAGATTCAACATGGAACACATCACCAATGCCTTTGTCCCTGGTTAGAGTAAGGTaGCGCAAAGTGCTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: AQALKADSTWNTSPMPLSLVRVR*RKVLSV
Trigger: GACACTCAGCACTTTGCGCCACCTTACTCTAACCAG...GGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGCTTGTTCTAGCAGTCTaGGACTGGAGCATATTGAAA +
Preference number: 4 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQLVLAV*DWSILK
Trigger: TTTCAATATGCTCCAGTCCCAGACTGCTAGAACAAG...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATCCTTCCGTGATGTATaGCTTGAGTTCCGCATTGAT +
Preference number: 4 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTSFRDV*LEFRID
Trigger: ATCAATGCGGAACTCAAGCCATACATCACGGAAGGA...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp TCCGACTCCTCCTGCAATCAACACGAGGTTTCTAGAGGCATCCGCAGGCTGAGGGTCTGTCATTGGAGGTaGGCCACAAATATAGAACAA +
Preference number: 4 (lower is better)
Translates to: SDSSCNQHEVSRGIRRLRVCHWR*ATNIEQ
Trigger: TTGTTCTATATTTGTGGCCCACCTCCAATGACAGAC...CCTCAGCCTGCGGATGCCTCTAGAAACCTCGTGTTGATTGCAGGAGGAGTCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR CCA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGTTTAAGTCTGCCAGCTaGCTTTTATTATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQFKSAS*LLLSSW
Trigger: CCAGCTGGATAATAAAAGCCAGCTGGCAGACTTAAA...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp TCTTCCCATCCCATGCTGCACTGGAGATGCTCACTTTGCACCTCCACTCCTAATTCATCAGAGCAGCTTTaGGATGAGGCTCCACCATTC +
Preference number: 4 (lower is better)
Translates to: SSHPMLHWRCSLCTSTPNSSEQL*DEAPPF
Trigger: GAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGA...ATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GCCCAGGCACTGAAGGCAGATTCAACATGGAACACATCACCAATGCCTTTGTCCTCATCAGAGCAGCTTTaGGATGAGGCTCCACCATTC +
Preference number: 4 (lower is better)
Translates to: AQALKADSTWNTSPMPLSSSEQL*DEAPPF
Trigger: GAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGA...GGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACAGACAAAACTCAAAACTaGGCAGAAGCTAGAGTCACC +
Preference number: 4 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTDKTQN*AEARVT
Trigger: GGTGACTCTAGCTTCTGCCCAGTTTTGAGTTTTGTC...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp TCTTCCCATCCCATGCTGCACTGGAGATGCTCACTTTGCACCTCCACTCCTAATAGTACCAAAAAGATCTaGACAGGCCTGGCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: SSHPMLHWRCSLCTSTPNSTKKI*TGLAGK
Trigger: CTTGCCTGCCAGGCCTGTCCAGATCTTTTTGGTACT...ATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp TCGAGCCTATACTCTGAGCCACCGCACTATGAATTCCAAGCCACTCTGGCTGGAGGCCATGGCGCTTTCTaGGCAAACAGAAAACTTAGA +
Preference number: 4 (lower is better)
Translates to: SSLYSEPPHYEFQATLAGGHGAF*ANRKLR
Trigger: TCTAAGTTTTCTGTTTGCCCAGAAAGCGCCATGGCC...TCCAGCCAGAGTGGCTTGGAATTCATAGTGCGGTGGCTCAGAGTATAGGCTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627468.2
CDS-3UTR CCA 90 bp GCCACCTGCACACCTCAGCTCATTCCAGGCTCAACATTCCTCCTCTTTTGGGTTTCTCTACAGCCACAGTaGTTTTCCTTAGTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: ATCTPQLIPGSTFLLFWVSLQPQ*FSLVAS
Trigger: GGAGGCAACTAAGGAAAACCACTGTGGCTGTAGAGA...AACCCAAAAGAGGAGGAATGTTGAGCCTGGAATGAGCTGAGGTGTGCAGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp GCACACCTCAGCTCATTCCAGGCTCAACATTCCTCCTCTTTTGGGTTTGCCTTATTTTGTCACCATCCCTaGAGGCTCAGGTACCCCCTT +
Preference number: 4 (lower is better)
Translates to: AHLSSFQAQHSSSFGFALFCHHP*RLRYPL
Trigger: AAGGGGGTACCTGAGCCTCCAGGGATGGTGACAAAA...TAAGGCAAACCCAAAAGAGGAGGAATGTTGAGCCTGGAATGAGCTGAGGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR CAA 72 bp GCTCATTCCAGGCTCAACATTCCTCCTCTTTTGGGTTaGCCTTACTTTTGTCACCATCCCTGGAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: AHSRLNIPPLLG*PYFCHHPWRLR
Trigger: CCTGAGCCTCCAGGGATGGTGACAAAAGTAAGGCAAACCCAAAAGAGGAGGAATGTTGAGCCTGGAATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR TCA 90 bp TCGAGCCTATACTCTGAGCCACCGCACTATGAATTCCAAGCCACTCTGGCTGGAGTCCTGCTATTACACTaGGACTTTTGGATGTACAGC +
Preference number: 4 (lower is better)
Translates to: SSLYSEPPHYEFQATLAGVLLLH*DFWMYS
Trigger: GCTGTACATCCAAAAGTCTCAGTGTAATAGCAGGAC...TCCAGCCAGAGTGGCTTGGAATTCATAGTGCGGTGGCTCAGAGTATAGGCTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp AAATCGACTAATCTCAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTAGTCCTGCTATTACACTaGGACTTTTGGATGTACAGC +
Preference number: 4 (lower is better)
Translates to: KSTNLSMCLQALMGGPQLVLLLH*DFWMYS
Trigger: GCTGTACATCCAAAAGTCTCAGTGTAATAGCAGGAC...TAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGTCGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR TCA 90 bp CCGCAGGATGGAAAGCAGAGGGTTAATTCCGACTCCTCCTGCAATCAACACGAGGTCCTGCTATTACACTaGGACTTTTGGATGTACAGC +
Preference number: 4 (lower is better)
Translates to: PQDGKQRVNSDSSCNQHEVLLLH*DFWMYS
Trigger: GCTGTACATCCAAAAGTCTCAGTGTAATAGCAGGAC...CTCGTGTTGATTGCAGGAGGAGTCGGAATTAACCCTCTGCTTTCCATCCTGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR TCA 90 bp CAAGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTCATCATGTCCTGCTATTACACTaGGACTTTTGGATGTACAGC +
Preference number: 4 (lower is better)
Translates to: QDGISHVCCLAGPQVSHHVLLLH*DFWMYS
Trigger: GCTGTACATCCAAAAGTCTCAGTGTAATAGCAGGAC...ATGATGAGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR TCA 90 bp GAACCCAGAGGGCAGGAGGGTGGTTCGTATATTTCACTGCCAATTCTATCACTCGAGTGTCAATCTCAGTaGCGCAGCCTCAATACGGAT +
Preference number: 4 (lower is better)
Translates to: EPRGQEGGSYISLPILSLECQSQ*RSLNTD
Trigger: ATCCGTATTGAGGCTGCGTCACTGAGATTGACACTC...GAGTGATAGAATTGGCAGTGAAATATACGAACCACCCTCCTGCCCTCTGGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR TCA 90 bp GAAGCTAGAGTCACCTTCAGGTCCCATGAATCATATCTGTTCAAGCCCACAAGTGGTGGCGCAAAGTGCTaGGTGTCAATCTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: EARVTFRSHESYLFKPTSGGAKC*VSISVT
Trigger: CGTCACTGAGATTGACACTCAGCACTTTGCGCCACC...ACTTGTGGGCTTGAACAGATATGATTCATGGGACCTGAAGGTGACTCTAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp CCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGAGCTTCACATATTCCCTTACACACCTTAGCTGCTaGCACAATCTCCCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: PTGKSGLLVVIQSFTYSLTHLSC*HNLPSK
Trigger: CTTCGACGGGAGATTGTGTCAGCAGCTAAGGTGTGT...AAGGGAATATGTGAAGCTCTGGATCACTACAAGGAGCCCTGACTTACCAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp CACTCATCCATCTCTACAGCCACAGTGGTTTTCCTTAGTTGCCTCCAACTTTTATGTTTGCCTGCTCTCTaGGGAGATCTGCTGCGTGCC +
Preference number: 4 (lower is better)
Translates to: HSSISTATVVFLSCLQLLCLPAL*GDLLRA
Trigger: GGCACGCAGCAGATCTCCTCAGAGAGCAGGCAAACA...TAAAAGTTGGAGGCAACTAAGGAAAACCACTGTGGCTGTAGAGATGGATGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR TCA 90 bp TCATCAGAGCAGCTTTGGGATGAGGCTCCACCATTCTTTCTATCCACTCTAGGGGGACAGGAGCTCTCCTaGGTAGATCTCACCTCTTTA +
Preference number: 4 (lower is better)
Translates to: SSEQLWDEAPPFFLSTLGGQELS*VDLTSL
Trigger: TAAAGAGGTGAGATCTACTCAGGAGAGCTCCTGTCC...CCCTAGAGTGGATAGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp GCCCAGGCACTGAAGGCAGATTCAACATGGAACACATCACCAATGCCTTTGTCCCACCTTCAGGTCCCATaGATCATATCTGTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: AQALKADSTWNTSPMPLSHLQVP*IISVQA
Trigger: GGCTTGAACAGATATGATTCATGGGACCTGAAGGTG...GGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp CTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGAACAGGTCAGCTGGGTaGTTTTTCCTTCAACTTTTA +
Preference number: 4 (lower is better)
Translates to: LMGGPQLAAPRWHLSRLLNRSAG*FFLQLL
Trigger: TAAAAGTTGAAGGAAAAATCACCCAGCTGACCTGTT...CAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR TCA 90 bp GATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTCATCATCCGAACAGGTCAGCTGGGTaGTTTTTCCTTCAACTTTTA +
Preference number: 4 (lower is better)
Translates to: DGISHVCCLAGPQVSHHPNRSAG*FFLQLL
Trigger: TAAAAGTTGAAGGAAAAATCACCCAGCTGACCTGTT...CGGATGATGAGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp GAAGCTAGAGTCACCTTCAGGTCCCATGAATCATATCTGTTCAAGCCCACAAGTCTACCTAGCACCTGCTaGAGCCTTCAGCGGGCTATT +
Preference number: 4 (lower is better)
Translates to: EARVTFRSHESYLFKPTSLPSTC*SLQRAI
Trigger: AATAGCCCGCTGAAGGCTGCAGCAGGTGCTAGGTAG...ACTTGTGGGCTTGAACAGATATGATTCATGGGACCTGAAGGTGACTCTAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp GGTTGTTTTCCAGTTGCTTGGAGAAAAAGTCTGTCATTGGAGGTGGGCCACAAACTACCTAGCACCTGCTaGAGCCTTCAGCGGGCTATT +
Preference number: 4 (lower is better)
Translates to: GCFPVAWRKSLSLEVGHKLPSTC*SLQRAI
Trigger: AATAGCCCGCTGAAGGCTGCAGCAGGTGCTAGGTAG...TTTGTGGCCCACCTCCAATGACAGACTTTTTCTCCAAGCAACTGGAAAACAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR GCA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATTCTCACAAAGTTCCTaGAGCCAGGAATTAACAAGC +
Preference number: 4 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTFSQSS*SQELTS
Trigger: GCTTGTTAATTCCTGGCTGCAGGAACTTTGTGAGAA...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp TCATCAGAGCAGCTTTGGGATGAGGCTCCACCATTCTTTCTATCCACTCTAGGGCCGTCGAAGGACACTTaGAGTTCTCTCCATGTGATC +
Preference number: 4 (lower is better)
Translates to: SSEQLWDEAPPFFLSTLGPSKDT*SSLHVI
Trigger: GATCACATGGAGAGAACTGCAAGTGTCCTTCGACGG...CCCTAGAGTGGATAGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp ACAAGCAAGCGGAGGCTCTTCACTGACGGTGACTCACTGGCAGCTCCACACACCGTTCGTATATTTCACTaGCAATTCTATCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: TSKRRLFTDGDSLAAPHTVRIFH*QFYHSL
Trigger: GAGAGAGTGATAGAATTGGCAGTGAAATATACGAAC...GGTGTGTGGAGCTGCCAGTGAGTCACCGTCAGTGAAGAGCCTCCGCTTGCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR GCA 90 bp AACATCGACTCCTGCTGGAATATCCAGCCTGCTGGGCTACCCTGCAAACTTTGGAATTCCGACTCCTCCTaGAATCAACACGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: NIDSCWNIQPAGLPCKLWNSDSS*NQHEVS
Trigger: AGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATT...CCAAAGTTTGCAGGGTAGCCCAGCAGGCTGGATATTCCAGCAGGAGTCGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR GCA 90 bp GAAGCTAGAGTCACCTTCAGGTCCCATGAATCATATCTGTTCAAGCCCACAAGTTCTGAGGAGATCTGCTaGGTGCCGCAGGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: EARVTFRSHESYLFKPTSSEEIC*VPQDGK
Trigger: CTTTCCATCCTGCGGCACGCAGCAGATCTCCTCAGA...ACTTGTGGGCTTGAACAGATATGATTCATGGGACCTGAAGGTGACTCTAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp GGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTAACATGCAAACTGCATaGAATCTTCTCAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: GADGWTTASSSKMASLTSNMQTA*NLLRKF
Trigger: GAATTTCCTGAGAAGATTGCATGCAGTTTGCATGTT...AGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp GGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGTCTGTTTTGTAACATaGAAACTGCATGCAATCTTC +
Preference number: 4 (lower is better)
Translates to: GADGWTTASSSKMASLTSVCFVT*KLHAIF
Trigger: GAAGATTGCATGCAGTTTGCATGTTACAAAACAGAC...AGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp TCTTCCCATCCCATGCTGCACTGGAGATGCTCACTTTGCACCTCCACTCCTAATTTTTCTGCCTTTGTCTaGCTCCTACCACCACTTCTC +
Preference number: 4 (lower is better)
Translates to: SSHPMLHWRCSLCTSTPNFSAFV*LLPPLL
Trigger: GAGAAGTGGTGGTAGGAGGCAGACAAAGGCAGAAAA...ATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGATAATCCCACATCCTTaGATCTCATCATGCTCCTAT +
Preference number: 4 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQIIPHP*ISSCSY
Trigger: ATAGGAGCATGATGAGATGCAAGGATGTGGGATTAT...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp GCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATCCTTGTGGAGATGCTCACTTTaGACCTCCACTCCTAATGCA +
Preference number: 4 (lower is better)
Translates to: ADCLHQLVDVPLDNPTSLWRCSL*TSTPNA
Trigger: TGCATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCA...CAAGGATGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp GATCTCTATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCATGCTGCACTGGAGATaGTCACTTTGCACCTCCACT +
Preference number: 4 (lower is better)
Translates to: DLYAGNLGPRTTCHKRNGMLHWR*SLCTST
Trigger: AGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCAT...GCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp ATTGAAAACCCACCAACCACAGAGACTCCTGGAATAAAGAAATCAACCCACTGGGGAAACTTTCCCCGCTaGCACCTAGCTTGCAGACCC +
Preference number: 4 (lower is better)
Translates to: IENPPTTETPGIKKSTHWGNFPR*HLACRP
Trigger: GGGTCTGCAAGCTAGGTGCCAGCGGGGAAAGTTTCC...CCAGTGGGTTGATTTCTTTATTCCAGGAGTCTCTGTGGTTGGTGGGTTTTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CCA 90 bp ATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTACAGCAGTTGGAACATaGACAGCTTTTCCATGCATT +
Preference number: 4 (lower is better)
Translates to: MGGPQLAAPRWHLSRLLLTAVGT*TAFPCI
Trigger: AATGCATGGAAAAGCTGTCCATGTTCCAACTGCTGT...AAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp GGAAAGCAGAGGGTTAATTCCGACTCCTCCTGCAATCAACACGAGGTTTCTAGACAGCAGCACAGGCCATaGCGCTTTCTTAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: GKQRVNSDSSCNQHEVSRQQHRP*RFLRSP
Trigger: TGGACTTCTAAGAAAGCGCCATGGCCTGTGCTGCTG...TCTAGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATTAACCCTCTGCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CCA 90 bp CAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTAAGAAATCAACCCACTaGCCAGCTTTAAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: QLQDGISHVCCLAGPQVSKKSTH*PALKEK
Trigger: CTTTTCCTTTAAAGCTGGCCAGTGGGTTGATTTCTT...AGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp AGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTCATCATCCCTTGTTCTAGCAGTCTaGGACTGGAGCATATTGAAA +
Preference number: 4 (lower is better)
Translates to: RWHLSRLLLSRATGLSSSLVLAV*DWSILK
Trigger: TTTCAATATGCTCCAGTCCCAGACTGCTAGAACAAG...GGATGATGAGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp GAGGAGATCTGCTGCGTGCCGCAGGATGGAAAGCAGAGGGTTAATTCCGACTCCGAAAAAGTCTGTCATTaGAGGTGGGCCACAAATATA +
Preference number: 4 (lower is better)
Translates to: EEICCVPQDGKQRVNSDSEKVCH*RWATNI
Trigger: TATATTTGTGGCCCACCTCCAATGACAGACTTTTTC...GGAGTCGGAATTAACCCTCTGCTTTCCATCCTGCGGCACGCAGCAGATCTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR CCA 90 bp GGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTTGTTTTCCAGTTGCTTaGAGAAAAAGTCTGTCATTG +
Preference number: 4 (lower is better)
Translates to: GADGWTTASSSKMASLTSCFPVA*RKSLSL
Trigger: CAATGACAGACTTTTTCTCCAAGCAACTGGAAAACA...AGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCATGTTAAGGAGCTGCTaGTGCCAAGAACAATTCTGG +
Preference number: 4 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLAMLRSC*CQEQFW
Trigger: CCAGAATTGTTCTTGGCACCAGCAGCTCCTTAACAT...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GAAGCTAGAGTCACCTTCAGGTCCCATGAATCATATCTGTTCAAGCCCACAAGTTCAGCCTGGGCACTTTaGGGCCAACTGGTAAGTCAG +
Preference number: 4 (lower is better)
Translates to: EARVTFRSHESYLFKPTSSAWAL*GQLVSQ
Trigger: CTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCTGA...ACTTGTGGGCTTGAACAGATATGATTCATGGGACCTGAAGGTGACTCTAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GCCACCTGCACACCTCAGCTCATTCCAGGCTCAACATTCCTCCTCTTTTGGGTTTCTTCCCGTGATGTATaGCTTGAGTTCCGCATTGAT +
Preference number: 4 (lower is better)
Translates to: ATCTPQLIPGSTFLLFWVSSRDV*LEFRID
Trigger: ATCAATGCGGAACTCAAGCCATACATCACGGGAAGA...AACCCAAAAGAGGAGGAATGTTGAGCCTGGAATGAGCTGAGGTGTGCAGGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp CCTGGAGGCTCAGGTACCCCCTTCTGTCCTTATAAATTCACACTCATCCATCTCTCTTGTCTCTGGAGATaGCCGCTAGTACTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PGGSGTPFCPYKFTLIHLSCLWR*PLVLFC
Trigger: GCAGAAGAGTACTAGCGGCCATCTCCAGAGACAAGA...GAGATGGATGAGTGTGAATTTATAAGGACAGAAGGGGGTACCTGAGCCTCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR TCA 90 bp CCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGAGCTTCACATATTCCCTTGAGTGTCAATCTCAGTaGCGCAGCCTCAATACGGAT +
Preference number: 4 (lower is better)
Translates to: PTGKSGLLVVIQSFTYSLECQSQ*RSLNTD
Trigger: ATCCGTATTGAGGCTGCGTCACTGAGATTGACACTC...AAGGGAATATGTGAAGCTCTGGATCACTACAAGGAGCCCTGACTTACCAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp ACCACAGAGACTCCTGGAATAAAGAAATCAACCCACTGGCCAGCTTTAAAGGAACTACCTAGCACCTGCTaGAGCCTTCAGCGGGCTATT +
Preference number: 4 (lower is better)
Translates to: TTETPGIKKSTHWPALKELPSTC*SLQRAI
Trigger: AATAGCCCGCTGAAGGCTGCAGCAGGTGCTAGGTAG...TTCCTTTAAAGCTGGCCAGTGGGTTGATTTCTTTATTCCAGGAGTCTCTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR GCA 90 bp AAATCGACTAATCTCAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTATTCTCACAAAGTTCCTaGAGCCAGGAATTAACAAGC +
Preference number: 4 (lower is better)
Translates to: KSTNLSMCLQALMGGPQLFSQSS*SQELTS
Trigger: GCTTGTTAATTCCTGGCTGCAGGAACTTTGTGAGAA...TAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGTCGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp CAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGTTCGTATATTTCACTaGCAATTCTATCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: QLAAPRWHLSRLLLSRATVRIFH*QFYHSL
Trigger: GAGAGAGTGATAGAATTGGCAGTGAAATATACGAAC...TGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp TCCGACTCCTCCTGCAATCAACACGAGGTTTCTAGAGGCATCCGCAGGCTGAGGGTTCGTATATTTCACTaGCAATTCTATCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: SDSSCNQHEVSRGIRRLRVRIFH*QFYHSL
Trigger: GAGAGAGTGATAGAATTGGCAGTGAAATATACGAAC...CCTCAGCCTGCGGATGCCTCTAGAAACCTCGTGTTGATTGCAGGAGGAGTCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR GCA 90 bp ATTGAAAACCCACCAACCACAGAGACTCCTGGAATAAAGAAATCAACCCACTGGTCTGAGGAGATCTGCTaGGTGCCGCAGGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: IENPPTTETPGIKKSTHWSEEIC*VPQDGK
Trigger: CTTTCCATCCTGCGGCACGCAGCAGATCTCCTCAGA...CCAGTGGGTTGATTTCTTTATTCCAGGAGTCTCTGTGGTTGGTGGGTTTTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR GCA 90 bp CACTCATCCATCTCTACAGCCACAGTGGTTTTCCTTAGTTGCCTCCAACTTTTATCTGAGGAGATCTGCTaGGTGCCGCAGGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: HSSISTATVVFLSCLQLLSEEIC*VPQDGK
Trigger: CTTTCCATCCTGCGGCACGCAGCAGATCTCCTCAGA...TAAAAGTTGGAGGCAACTAAGGAAAACCACTGTGGCTGTAGAGATGGATGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR GCA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCTCCATTTCTTTTGTTTaGCTGCTCTCTGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLASISFV*LLSEEI
Trigger: GATCTCCTCAGAGAGCAGGCAAACAAAAGAAATGGA...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp GATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTAACATGCAAACTGCATaGAATCTTCTCAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: DGWTTASSSKMASLTSAANMQTA*NLLRKF
Trigger: GAATTTCCTGAGAAGATTGCATGCAGTTTGCATGTT...AGCAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp GCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATCCTTGTTAAGGAGCTGCTGGTaGCAAGAACAATTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: ADCLHQLVDVPLDNPTSLLRSCW*QEQFWQ
Trigger: TTGCCAGAATTGTTCTTGGCACCAGCAGCTCCTTAA...CAAGGATGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp GAAGCTAGAGTCACCTTCAGGTCCCATGAATCATATCTGTTCAAGCCCACAAGTCCTTGCATCTCATCATaGTCCTATGCCCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: EARVTFRSHESYLFKPTSPCISS*SYALSL
Trigger: CAGGCTGAGGGCATAGGAGCATGATGAGATGCAAGG...ACTTGTGGGCTTGAACAGATATGATTCATGGGACCTGAAGGTGACTCTAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCACTCATGCAGTGCTCTaGCAAGCACTTTACATGTAT +
Preference number: 4 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLATHAVL*QALYMY
Trigger: ATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGT...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp ATTTTTCCTTCAACTTTTAGGAAATCGACTAATCTCAGCATGTGCCTGCAGGCGCCGGCCACGTTTAGTTaGAGGCGCCTGGAATACTCC +
Preference number: 4 (lower is better)
Translates to: IFPSTFRKSTNLSMCLQAPATFS*RRLEYS
Trigger: GGAGTATTCCAGGCGCCTGCAACTAAACGTGGCCGG...CGCCTGCAGGCACATGCTGAGATTAGTCGATTTCCTAAAAGTTGAAGGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605932.5
CDS-3UTR GCA 90 bp GCCTCCAACTTTTATCTTAGGGTGACAAGTCCACCTGGAGCCAGCATGCCTGTACCTGCTGGGCTACCCTaGAAACTTTGGATTTTACAT +
Preference number: 4 (lower is better)
Translates to: ASNFYLRVTSPPGASMPVPAGLP*KLWILH
Trigger: ATGTAAAATCCAAAGTTTGCAGGGTAGCCCAGCAGG...TACAGGCATGCTGGCTCCAGGTGGACTTGTCACCCTAAGATAAAAGTTGGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCACAGCAGTTGGAACATaGACAGCTTTTCCATGCATT +
Preference number: 4 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLATAVGT*TAFPCI
Trigger: AATGCATGGAAAAGCTGTCCATGTTCCAACTGCTGT...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GCCCAGGCACTGAAGGCAGATTCAACATGGAACACATCACCAATGCCTTTGTCCTGGATGTACAGCAGTTaGAACATGGACAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: AQALKADSTWNTSPMPLSWMYSS*NMDSFS
Trigger: GGAAAAGCTGTCCATGTTCCAACTGCTGTACATCCA...GGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GTTAATTCCGACTCCTCCTGCAATCAACACGAGGTTTCTAGAGGCATCCGCAGGTGGATGTACAGCAGTTaGAACATGGACAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: VNSDSSCNQHEVSRGIRRWMYSS*NMDSFS
Trigger: GGAAAAGCTGTCCATGTTCCAACTGCTGTACATCCA...CCTGCGGATGCCTCTAGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CCA 90 bp ATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTAAGAAATCAACCCACTaGCCAGCTTTAAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: MGGPQLAAPRWHLSRLLLKKSTH*PALKEK
Trigger: CTTTTCCTTTAAAGCTGGCCAGTGGGTTGATTTCTT...AAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp ATCAACCCACTGGCCAGCTTTAAAGGAAAAGTCTTGATCAGCAACAAGCAAGCGCAGAGGGCAGGAGGGTaGTTCGTATATTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: INPLASFKGKVLISNKQAQRAGG*FVYFTA
Trigger: GGCAGTGAAATATACGAACCACCCTCCTGCCCTCTG...CGCTTGCTTGTTGCTGATCAAGACTTTTCCTTTAAAGCTGGCCAGTGGGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CCA 90 bp GAAGCTAGAGTCACCTTCAGGTCCCATGAATCATATCTGTTCAAGCCCACAAGTCAGAGGGCAGGAGGGTaGTTCGTATATTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: EARVTFRSHESYLFKPTSQRAGG*FVYFTA
Trigger: GGCAGTGAAATATACGAACCACCCTCCTGCCCTCTG...ACTTGTGGGCTTGAACAGATATGATTCATGGGACCTGAAGGTGACTCTAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATCCTTGTCCTTCCGTGATGTATaGCTTGAGTTCCGCATTGAT +
Preference number: 4 (lower is better)
Translates to: ADCLHQLVDVPLDNPTSLSFRDV*LEFRID
Trigger: ATCAATGCGGAACTCAAGCCATACATCACGGAAGGA...CAAGGATGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GTTAATTCCGACTCCTCCTGCAATCAACACGAGGTTTCTAGAGGCATCCGCAGGTCCTTCCGTGATGTATaGCTTGAGTTCCGCATTGAT +
Preference number: 4 (lower is better)
Translates to: VNSDSSCNQHEVSRGIRRSFRDV*LEFRID
Trigger: ATCAATGCGGAACTCAAGCCATACATCACGGAAGGA...CCTGCGGATGCCTCTAGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR CCA 90 bp TCGAGCCTATACTCTGAGCCACCGCACTATGAATTCCAAGCCACTCTGGCTGGAGTCTGTCATTGGAGGTaGGCCACAAATATAGAACAA +
Preference number: 4 (lower is better)
Translates to: SSLYSEPPHYEFQATLAGVCHWR*ATNIEQ
Trigger: TTGTTCTATATTTGTGGCCCACCTCCAATGACAGAC...TCCAGCCAGAGTGGCTTGGAATTCATAGTGCGGTGGCTCAGAGTATAGGCTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp AACATCGACTCCTGCTGGAATATCCAGCCTGCTGGGCTACCCTGCAAACTTTGGGTCTGTCATTGGAGGTaGGCCACAAATATAGAACAA +
Preference number: 4 (lower is better)
Translates to: NIDSCWNIQPAGLPCKLWVCHWR*ATNIEQ
Trigger: TTGTTCTATATTTGTGGCCCACCTCCAATGACAGAC...CCAAAGTTTGCAGGGTAGCCCAGCAGGCTGGATATTCCAGCAGGAGTCGATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp AGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTCATCATCCGAAAAAGTCTGTCATTaGAGGTGGGCCACAAATATA +
Preference number: 4 (lower is better)
Translates to: RWHLSRLLLSRATGLSSSEKVCH*RWATNI
Trigger: TATATTTGTGGCCCACCTCCAATGACAGACTTTTTC...GGATGATGAGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp CTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGTGTTTTCCAGTTGCTTaGAGAAAAAGTCTGTCATTG +
Preference number: 4 (lower is better)
Translates to: LMGGPQLAAPRWHLSRLLCFPVA*RKSLSL
Trigger: CAATGACAGACTTTTTCTCCAAGCAACTGGAAAACA...CAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp AGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTCATCATCCTGTTCTTTGGGTACATaGTTGTTTTCCAGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: RWHLSRLLLSRATGLSSSCSLGT*LFSSCL
Trigger: CAAGCAACTGGAAAACAACCATGTACCCAAAGAACA...GGATGATGAGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp GCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATCCTTGATGTTAAGGAGCTGCTaGTGCCAAGAACAATTCTGG +
Preference number: 4 (lower is better)
Translates to: ADCLHQLVDVPLDNPTSLMLRSC*CQEQFW
Trigger: CCAGAATTGTTCTTGGCACCAGCAGCTCCTTAACAT...CAAGGATGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GAAGCTAGAGTCACCTTCAGGTCCCATGAATCATATCTGTTCAAGCCCACAAGTGCTAAACCGAGACAGTaGGCGACACCTCCCTATCTT +
Preference number: 4 (lower is better)
Translates to: EARVTFRSHESYLFKPTSAKPRQ*ATPPYL
Trigger: AAGATAGGGAGGTGTCGCCCACTGTCTCGGTTTAGC...ACTTGTGGGCTTGAACAGATATGATTCATGGGACCTGAAGGTGACTCTAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GCCACCTGCACACCTCAGCTCATTCCAGGCTCAACATTCCTCCTCTTTTGGGTTCTACCCTGCAAACTTTaGATTTTACATCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: ATCTPQLIPGSTFLLFWVLPCKL*ILHPPQ
Trigger: CTGTGGAGGATGTAAAATCCAAAGTTTGCAGGGTAG...AACCCAAAAGAGGAGGAATGTTGAGCCTGGAATGAGCTGAGGTGTGCAGGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR TCA 90 bp GAAGCTAGAGTCACCTTCAGGTCCCATGAATCATATCTGTTCAAGCCCACAAGTCTCAAGGTCACTCGGTaGAGCGAAATTCTACGGGAA +
Preference number: 4 (lower is better)
Translates to: EARVTFRSHESYLFKPTSLKVTR*SEILRE
Trigger: TTCCCGTAGAATTTCGCTTCACCGAGTGACCTTGAG...ACTTGTGGGCTTGAACAGATATGATTCATGGGACCTGAAGGTGACTCTAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp ATTTTTCCTTCAACTTTTAGGAAATCGACTAATCTCAGCATGTGCCTGCAGGCGAGTGTACACGTATTGTaGACCCAGAGGGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: IFPSTFRKSTNLSMCLQASVHVL*TQRAGG
Trigger: CCCTCCTGCCCTCTGGGTTCACAATACGTGTACACT...CGCCTGCAGGCACATGCTGAGATTAGTCGATTTCCTAAAAGTTGAAGGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR TCA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCGAGGCATCCGCAGGCTaGGGGTCAAAGAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMIEASAG*GSKKNS
Trigger: AGAGTTCTTCTTTGACCCTCAGCCTGCGGATGCCTC...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp CATATTGAAAACCCACCAACCACAGAGACTCCTGGAATAAAGAAATCAACCCACGAGGCATCCGCAGGCTaGGGGTCAAAGAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: HIENPPTTETPGIKKSTHEASAG*GSKKNS
Trigger: AGAGTTCTTCTTTGACCCTCAGCCTGCGGATGCCTC...GTGGGTTGATTTCTTTATTCCAGGAGTCTCTGTGGTTGGTGGGTTTTCAATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR TCA 90 bp GCCCAGGCACTGAAGGCAGATTCAACATGGAACACATCACCAATGCCTTTGTCCTATTCCCTTCACCTCTaGGGTACTAATGACCATTTC +
Preference number: 4 (lower is better)
Translates to: AQALKADSTWNTSPMPLSYSLHL*GTNDHF
Trigger: GAAATGGTCATTAGTACCTCAGAGGTGAAGGGAATA...GGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp CAGAGGGTTAATTCCGACTCCTCCTGCAATCAACACGAGGTTTCTAGAGGCATCACACACCTTAGCTGCTaGCACAATCTGGTTAGAGTA +
Preference number: 4 (lower is better)
Translates to: QRVNSDSSCNQHEVSRGITHLSC*HNLVRV
Trigger: TACTCTAACCAGATTGTGTCAGCAGCTAAGGTGTGT...GATGCCTCTAGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATTAACCCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452581.5
CDS-3UTR GCA 90 bp GTTAATTCCGACTCCTCCTGCAATCAACACGAGGTTTCTAGAGGCATCCGCAGGTTCTCACAAAGTTCCTaGAGCCAGGAATTAACAAGC +
Preference number: 4 (lower is better)
Translates to: VNSDSSCNQHEVSRGIRRFSQSS*SQELTS
Trigger: GCTTGTTAATTCCTGGCTGCAGGAACTTTGTGAGAA...CCTGCGGATGCCTCTAGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR GCA 90 bp TCATCAGAGCAGCTTTGGGATGAGGCTCCACCATTCTTTCTATCCACTCTAGGGAATTCCGACTCCTCCTaGAATCAACACGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SSEQLWDEAPPFFLSTLGNSDSS*NQHEVS
Trigger: AGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATT...CCCTAGAGTGGATAGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp ATTTTTCCTTCAACTTTTAGGAAATCGACTAATCTCAGCATGTGCCTGCAGGCGTCTGAGGAGATCTGCTaGGTGCCGCAGGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: IFPSTFRKSTNLSMCLQASEEIC*VPQDGK
Trigger: CTTTCCATCCTGCGGCACGCAGCAGATCTCCTCAGA...CGCCTGCAGGCACATGCTGAGATTAGTCGATTTCCTAAAAGTTGAAGGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp TTTGGGTTTGCCTTACTTTTGTCACCATCCCTGGAGGCTCAGGTACCCCCTTCTTCCATTTCTTTTGTTTaGCTGCTCTCTGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: FGFALLLSPSLEAQVPPSSISFV*LLSEEI
Trigger: GATCTCCTCAGAGAGCAGGCAAACAAAAGAAATGGA...AGAAGGGGGTACCTGAGCCTCCAGGGATGGTGACAAAAGTAAGGCAAACCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR GCA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACAAACATGCAAACTGCATaGAATCTTCTCAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTNMQTA*NLLRKF
Trigger: GAATTTCCTGAGAAGATTGCATGCAGTTTGCATGTT...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp AAATCGACTAATCTCAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTATGGTTGTTTTCCAGTTaGTTGGAGAAAAAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: KSTNLSMCLQALMGGPQLWLFSS*LEKKSV
Trigger: GACAGACTTTTTCTCCAAGCAACTGGAAAACAACCA...TAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGTCGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp TCATCAGAGCAGCTTTGGGATGAGGCTCCACCATTCTTTCTATCCACTCTAGGGTTAAGGAGCTGCTGGTaGCAAGAACAATTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SSEQLWDEAPPFFLSTLGLRSCW*QEQFWQ
Trigger: TTGCCAGAATTGTTCTTGGCACCAGCAGCTCCTTAA...CCCTAGAGTGGATAGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp CCTGGAGGCTCAGGTACCCCCTTCTGTCCTTATAAATTCACACTCATCCATCTCGGAAGGAATTCAGCCTaGAGACTCAAAACTGCAACA +
Preference number: 4 (lower is better)
Translates to: PGGSGTPFCPYKFTLIHLGRNSA*RLKTAT
Trigger: TGTTGCAGTTTTGAGTCTGCAGGCTGAATTCCTTCC...GAGATGGATGAGTGTGAATTTATAAGGACAGAAGGGGGTACCTGAGCCTCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp TCCTTAGTTGCCTCCAACTTTTATCTTAGGGTGACAAGTCCACCTGGAGCCAGCTGGATGTACAGCAGTTaGAACATGGACAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SLVASNFYLRVTSPPGASWMYSS*NMDSFS
Trigger: GGAAAAGCTGTCCATGTTCCAACTGCTGTACATCCA...GCTGGCTCCAGGTGGACTTGTCACCCTAAGATAAAAGTTGGAGGCAACTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp GATCTCTATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCTGGATGTACAGCAGTTaGAACATGGACAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: DLYAGNLGPRTTCHKRNGWMYSS*NMDSFS
Trigger: GGAAAAGCTGTCCATGTTCCAACTGCTGTACATCCA...GCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCCAGCCTCAATACGGATaGCTCCAACAGAGCACCGCA +
Preference number: 4 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMIQPQYG*LQQSTA
Trigger: TGCGGTGCTCTGTTGGAGCCATCCGTATTGAGGCTG...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCAAGAAATCAACCCACTaGCCAGCTTTAAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLAKKSTH*PALKEK
Trigger: CTTTTCCTTTAAAGCTGGCCAGTGGGTTGATTTCTT...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATGTTTTCCAGTTGCTTaGAGAAAAAGTCTGTCATTG +
Preference number: 4 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTCFPVA*RKSLSL
Trigger: CAATGACAGACTTTTTCTCCAAGCAACTGGAAAACA...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCTGTTCTTTGGGTACATaGTTGTTTTCCAGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLACSLGT*LFSSCL
Trigger: CAAGCAACTGGAAAACAACCATGTACCCAAAGAACA...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GGGTTAATTCCGACTCCTCCTGCAATCAACACGAGGTTTCTAGAGGCATCCGCATTTAAGTCTGCCAGCTaGCTTTTATTATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLIPTPPAINTRFLEASAFKSAS*LLLSSW
Trigger: CCAGCTGGATAATAAAAGCCAGCTGGCAGACTTAAA...TGCGGATGCCTCTAGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATTAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR CCA 90 bp GATCTCTATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCATAAAAGGAATGGCCTaGCCTCAGTCAGGACTTCTT +
Preference number: 4 (lower is better)
Translates to: DLYAGNLGPRTTCHKRNGIKGMA*PQSGLL
Trigger: AAGAAGTCCTGACTGAGGCCAGGCCATTCCTTTTAT...GCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp TCTTCCCATCCCATGCTGCACTGGAGATGCTCACTTTGCACCTCCACTCCTAATAATTCCAAGCCACTCTaGCTGGAGTTAGCTCAATTT +
Preference number: 4 (lower is better)
Translates to: SSHPMLHWRCSLCTSTPNNSKPL*LELAQF
Trigger: AAATTGAGCTAACTCCAGCCAGAGTGGCTTGGAATT...ATTAGGAGTGGAGGTGCAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GCACACCTCAGCTCATTCCAGGCTCAACATTCCTCCTCTTTTGGGTTTGCCTTATTTTCTTCTTGTCTCTaGAGATGGCCGCTAGTACTC +
Preference number: 4 (lower is better)
Translates to: AHLSSFQAQHSSSFGFALFSSCL*RWPLVL
Trigger: GAGTACTAGCGGCCATCTCCAGAGACAAGAAGAAAA...TAAGGCAAACCCAAAAGAGGAGGAATGTTGAGCCTGGAATGAGCTGAGGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp ATTCACACTCATCCATCTCTACAGCCACAGTGGTTTTCCTTAGTTGCCTCCAACGAATATCCAGCCTGCTaGGCTACCCTGCAAACTTTG +
Preference number: 4 (lower is better)
Translates to: IHTHPSLQPQWFSLVASNEYPAC*ATLQTL
Trigger: CAAAGTTTGCAGGGTAGCCCAGCAGGCTGGATATTC...GTTGGAGGCAACTAAGGAAAACCACTGTGGCTGTAGAGATGGATGAGTGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR TCA 90 bp CTGGGACTGGAGCATATTGAAAACCCACCAACCACAGAGACTCCTGGAATAAAGGTCCTGCTATTACACTaGGACTTTTGGATGTACAGC +
Preference number: 4 (lower is better)
Translates to: LGLEHIENPPTTETPGIKVLLLH*DFWMYS
Trigger: GCTGTACATCCAAAAGTCTCAGTGTAATAGCAGGAC...CTTTATTCCAGGAGTCTCTGTGGTTGGTGGGTTTTCAATATGCTCCAGTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR TCA 90 bp TGGGTGATTTTTCCTTCAACTTTTAGGAAATCGACTAATCTCAGCATGTGCCTGGGTGGCGCAAAGTGCTaGGTGTCAATCTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: WVIFPSTFRKSTNLSMCLGGAKC*VSISVT
Trigger: CGTCACTGAGATTGACACTCAGCACTTTGCGCCACC...CAGGCACATGCTGAGATTAGTCGATTTCCTAAAAGTTGAAGGAAAAATCACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR TCA 90 bp TCTTTTTCTTCTTGTCTCTGGAGATGGCCGCTAGTACTCTTCTGCTCTTTATTTGGTGGCGCAAAGTGCTaGGTGTCAATCTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: SFSSCLWRWPLVLFCSLFGGAKC*VSISVT
Trigger: CGTCACTGAGATTGACACTCAGCACTTTGCGCCACC...AAATAAAGAGCAGAAGAGTACTAGCGGCCATCTCCAGAGACAAGAAGAAAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR TCA 90 bp ATTTTTCCTTCAACTTTTAGGAAATCGACTAATCTCAGCATGTGCCTGCAGGCGACACACCTTAGCTGCTaGCACAATCTCCCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: IFPSTFRKSTNLSMCLQATHLSC*HNLPSK
Trigger: CTTCGACGGGAGATTGTGTCAGCAGCTAAGGTGTGT...CGCCTGCAGGCACATGCTGAGATTAGTCGATTTCCTAAAAGTTGAAGGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR TCA 90 bp ACCACAGAGACTCCTGGAATAAAGAAATCAACCCACTGGCCAGCTTTAAAGGAAGGACAGGAGCTCTCCTaGGTAGATCTCACCTCTTTA +
Preference number: 4 (lower is better)
Translates to: TTETPGIKKSTHWPALKEGQELS*VDLTSL
Trigger: TAAAGAGGTGAGATCTACTCAGGAGAGCTCCTGTCC...TTCCTTTAAAGCTGGCCAGTGGGTTGATTTCTTTATTCCAGGAGTCTCTGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR TCA 90 bp AACATCGACTCCTGCTGGAATATCCAGCCTGCTGGGCTACCCTGCAAACTTTGGGCCAGTTCCTCAAAATaGATCTTTCTAGATACAAGA +
Preference number: 4 (lower is better)
Translates to: NIDSCWNIQPAGLPCKLWASSSK*IFLDTR
Trigger: TCTTGTATCTAGAAAGATTCATTTTGAGGAACTGGC...CCAAAGTTTGCAGGGTAGCCCAGCAGGCTGGATATTCCAGCAGGAGTCGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR TCA 90 bp CTGGAGCCAGCATGCCTGTATTTCTTGCCATGGGGCCATATTGAACTTTCCTCTTTACCCTTCCTAATGTaGGTGGACTTCAATCAGTTG +
Preference number: 4 (lower is better)
Translates to: LEPACLYFLPWGHIELSSLPFLM*VDFNQL
Trigger: CAACTGATTGAAGTCCACTCACATTAGGAAGGGTAA...AGAGGAAAGTTCAATATGGCCCCATGGCAAGAAATACAGGCATGCTGGCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR GCA 90 bp AGGAAATCGACTAATCTCAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGTGGACAGCTTTTCCATaGATTAAAATTCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: RKSTNLSMCLQALMGGPQWTAFP*IKILTK
Trigger: CTTTGTGAGAATTTTAATGCATGGAAAAGCTGTCCA...CTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGTCGATTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp AGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTCATCATCCTGGACAGCTTTTCCATaGATTAAAATTCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: RWHLSRLLLSRATGLSSSWTAFP*IKILTK
Trigger: CTTTGTGAGAATTTTAATGCATGGAAAAGCTGTCCA...GGATGATGAGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCGTTCGTATATTTCACTaGCAATTCTATCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLAVRIFH*QFYHSL
Trigger: GAGAGAGTGATAGAATTGGCAGTGAAATATACGAAC...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp CCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGAGCTTCACATATTCCCTTAATTCCGACTCCTCCTaGAATCAACACGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: PTGKSGLLVVIQSFTYSLNSDSS*NQHEVS
Trigger: AGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATT...AAGGGAATATGTGAAGCTCTGGATCACTACAAGGAGCCCTGACTTACCAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp CAGAGGGCAGGAGGGTGGTTCGTATATTTCACTGCCAATTCTATCACTCTCTCTAATTCCGACTCCTCCTaGAATCAACACGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: QRAGGWFVYFTANSITLSNSDSS*NQHEVS
Trigger: AGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATT...AGAGAGAGTGATAGAATTGGCAGTGAAATATACGAACCACCCTCCTGCCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR GCA 90 bp GGAAAGCAGAGGGTTAATTCCGACTCCTCCTGCAATCAACACGAGGTTTCTAGAAATTCCGACTCCTCCTaGAATCAACACGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: GKQRVNSDSSCNQHEVSRNSDSS*NQHEVS
Trigger: AGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATT...TCTAGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATTAACCCTCTGCTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR GCA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCAACATGCAAACTGCATaGAATCTTCTCAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLANMQTA*NLLRKF
Trigger: GAATTTCCTGAGAAGATTGCATGCAGTTTGCATGTT...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp TCGAGCCTATACTCTGAGCCACCGCACTATGAATTCCAAGCCACTCTGGCTGGAGTCTGTTTTGTAACATaGAAACTGCATGCAATCTTC +
Preference number: 4 (lower is better)
Translates to: SSLYSEPPHYEFQATLAGVCFVT*KLHAIF
Trigger: GAAGATTGCATGCAGTTTGCATGTTACAAAACAGAC...TCCAGCCAGAGTGGCTTGGAATTCATAGTGCGGTGGCTCAGAGTATAGGCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp ATTCACACTCATCCATCTCTACAGCCACAGTGGTTTTCCTTAGTTGCCTCCAACTTTTCTGCCTTTGTCTaGCTCCTACCACCACTTCTC +
Preference number: 4 (lower is better)
Translates to: IHTHPSLQPQWFSLVASNFSAFV*LLPPLL
Trigger: GAGAAGTGGTGGTAGGAGGCAGACAAAGGCAGAAAA...GTTGGAGGCAACTAAGGAAAACCACTGTGGCTGTAGAGATGGATGAGTGTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR GCA 90 bp GCCTCCAACTTTTATCTTAGGGTGACAAGTCCACCTGGAGCCAGCATGCCTGTAATACGTGTGCACACATaGACATACGTAGTTCACATA +
Preference number: 4 (lower is better)
Translates to: ASNFYLRVTSPPGASMPVIRVHT*TYVVHI
Trigger: TATGTGAACTACGTATGTGCATGTGTGCACACGTAT...TACAGGCATGCTGGCTCCAGGTGGACTTGTCACCCTAAGATAAAAGTTGGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp GCACACCTCAGCTCATTCCAGGCTCAACATTCCTCCTCTTTTGGGTTTGCCTTAACAGCAGTTGGAACATaGACAGCTTTTCCATGCATT +
Preference number: 4 (lower is better)
Translates to: AHLSSFQAQHSSSFGFALTAVGT*TAFPCI
Trigger: AATGCATGGAAAAGCTGTCCATGTTCCAACTGCTGT...TAAGGCAAACCCAAAAGAGGAGGAATGTTGAGCCTGGAATGAGCTGAGGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp AACCCACTGGCCAGCTTTAAAGGAAAAGTCTTGATCAGCAACAAGCAAGCGGAGTGGATGTACAGCAGTTaGAACATGGACAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: NPLASFKGKVLISNKQAEWMYSS*NMDSFS
Trigger: GGAAAAGCTGTCCATGTTCCAACTGCTGTACATCCA...CTCCGCTTGCTTGTTGCTGATCAAGACTTTTCCTTTAAAGCTGGCCAGTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CCA 90 bp GCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATCCTTGAAGAAATCAACCCACTaGCCAGCTTTAAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: ADCLHQLVDVPLDNPTSLKKSTH*PALKEK
Trigger: CTTTTCCTTTAAAGCTGGCCAGTGGGTTGATTTCTT...CAAGGATGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp CATATTGAAAACCCACCAACCACAGAGACTCCTGGAATAAAGAAATCAACCCACCAGAGGGCAGGAGGGTaGTTCGTATATTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: HIENPPTTETPGIKKSTHQRAGG*FVYFTA
Trigger: GGCAGTGAAATATACGAACCACCCTCCTGCCCTCTG...GTGGGTTGATTTCTTTATTCCAGGAGTCTCTGTGGTTGGTGGGTTTTCAATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CCA 90 bp CCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGAGCTTCACATATTCCCTTGACAAAACTCAAAACTaGGCAGAAGCTAGAGTCACC +
Preference number: 4 (lower is better)
Translates to: PTGKSGLLVVIQSFTYSLDKTQN*AEARVT
Trigger: GGTGACTCTAGCTTCTGCCCAGTTTTGAGTTTTGTC...AAGGGAATATGTGAAGCTCTGGATCACTACAAGGAGCCCTGACTTACCAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GCCCAGGCACTGAAGGCAGATTCAACATGGAACACATCACCAATGCCTTTGTCCTACCTATTTTGTGCCTaGCACAGCAATAAACAAGAC +
Preference number: 4 (lower is better)
Translates to: AQALKADSTWNTSPMPLSYLFCA*HSNKQD
Trigger: GTCTTGTTTATTGCTGTGCCAGGCACAAAATAGGTA...GGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GCACACCTCAGCTCATTCCAGGCTCAACATTCCTCCTCTTTTGGGTTTGCCTTACTGTATTTCTTGCCATaGGGCCATATTGAACTTTCC +
Preference number: 4 (lower is better)
Translates to: AHLSSFQAQHSSSFGFALLYFLP*GHIELS
Trigger: GGAAAGTTCAATATGGCCCCATGGCAAGAAATACAG...TAAGGCAAACCCAAAAGAGGAGGAATGTTGAGCCTGGAATGAGCTGAGGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp TCTCAGGAGAATCCTGATGAATCAGATACAAATGCTGTGATGCCATTAATGGGGGGTGACAAGTCCACCTaGAGCCAGCATGCCTGTATT +
Preference number: 4 (lower is better)
Translates to: SQENPDESDTNAVMPLMGGDKST*SQHACI
Trigger: AATACAGGCATGCTGGCTCCAGGTGGACTTGTCACC...CCCCATTAATGGCATCACAGCATTTGTATCTGATTCATCAGGATTCTCCTGAGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp GCCACCTGCACACCTCAGCTCATTCCAGGCTCAACATTCCTCCTCTTTTGGGTTGAGCATGATTTTAAATaGCGTATGTGTATACGTGTG +
Preference number: 4 (lower is better)
Translates to: ATCTPQLIPGSTFLLFWVEHDFK*RMCIRV
Trigger: CACACGTATACACATACGCCATTTAAAATCATGCTC...AACCCAAAAGAGGAGGAATGTTGAGCCTGGAATGAGCTGAGGTGTGCAGGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR TCA 90 bp TATTCTTCCTTCCGTGATGTATGGCTTGAGTTCCGCATTGATTTGTGTAGTCTGCTCAAGGTCACTCGGTaGAGCGAAATTCTACGGGAA +
Preference number: 4 (lower is better)
Translates to: YSSFRDVWLEFRIDLCSLLKVTR*SEILRE
Trigger: TTCCCGTAGAATTTCGCTTCACCGAGTGACCTTGAG...CAGACTACACAAATCAATGCGGAACTCAAGCCATACATCACGGAAGGAAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR TCA 90 bp CATATTGAAAACCCACCAACCACAGAGACTCCTGGAATAAAGAAATCAACCCACCTCAAGGTCACTCGGTaGAGCGAAATTCTACGGGAA +
Preference number: 4 (lower is better)
Translates to: HIENPPTTETPGIKKSTHLKVTR*SEILRE
Trigger: TTCCCGTAGAATTTCGCTTCACCGAGTGACCTTGAG...GTGGGTTGATTTCTTTATTCCAGGAGTCTCTGTGGTTGGTGGGTTTTCAATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR TCA 90 bp ATTCACACTCATCCATCTCTACAGCCACAGTGGTTTTCCTTAGTTGCCTCCAACGTCCTGCTATTACACTaGGACTTTTGGATGTACAGC +
Preference number: 4 (lower is better)
Translates to: IHTHPSLQPQWFSLVASNVLLLH*DFWMYS
Trigger: GCTGTACATCCAAAAGTCTCAGTGTAATAGCAGGAC...GTTGGAGGCAACTAAGGAAAACCACTGTGGCTGTAGAGATGGATGAGTGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR TCA 90 bp ATTTTTCCTTCAACTTTTAGGAAATCGACTAATCTCAGCATGTGCCTGCAGGCGGAGTGTCAATCTCAGTaGCGCAGCCTCAATACGGAT +
Preference number: 4 (lower is better)
Translates to: IFPSTFRKSTNLSMCLQAECQSQ*RSLNTD
Trigger: ATCCGTATTGAGGCTGCGTCACTGAGATTGACACTC...CGCCTGCAGGCACATGCTGAGATTAGTCGATTTCCTAAAAGTTGAAGGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR TCA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCGAGTGTCAATCTCAGTaGCGCAGCCTCAATACGGAT +
Preference number: 4 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMIECQSQ*RSLNTD
Trigger: ATCCGTATTGAGGCTGCGTCACTGAGATTGACACTC...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp CCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGAGCTTCACATATTCCCTTTATTCCCTTCACCTCTaGGGTACTAATGACCATTTC +
Preference number: 4 (lower is better)
Translates to: PTGKSGLLVVIQSFTYSLYSLHL*GTNDHF
Trigger: GAAATGGTCATTAGTACCTCAGAGGTGAAGGGAATA...AAGGGAATATGTGAAGCTCTGGATCACTACAAGGAGCCCTGACTTACCAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp CAGAGGGCAGGAGGGTGGTTCGTATATTTCACTGCCAATTCTATCACTCTCTCTTTCTCACAAAGTTCCTaGAGCCAGGAATTAACAAGC +
Preference number: 4 (lower is better)
Translates to: QRAGGWFVYFTANSITLSFSQSS*SQELTS
Trigger: GCTTGTTAATTCCTGGCTGCAGGAACTTTGTGAGAA...AGAGAGAGTGATAGAATTGGCAGTGAAATATACGAACCACCCTCCTGCCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR GCA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCTGGACAGCTTTTCCATaGATTAAAATTCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLAWTAFP*IKILTK
Trigger: CTTTGTGAGAATTTTAATGCATGGAAAAGCTGTCCA...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp GCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATCCTTGGTTCGTATATTTCACTaGCAATTCTATCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: ADCLHQLVDVPLDNPTSLVRIFH*QFYHSL
Trigger: GAGAGAGTGATAGAATTGGCAGTGAAATATACGAAC...CAAGGATGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp CCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGAGCTTCACATATTCCCTTTTTCTTTTGTTTGCCTaGTCTCTGAGGAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: PTGKSGLLVVIQSFTYSLFLLFA*SLRRSA
Trigger: AGCAGATCTCCTCAGAGAGCAGGCAAACAAAAGAAA...AAGGGAATATGTGAAGCTCTGGATCACTACAAGGAGCCCTGACTTACCAGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp GCCCAGGCACTGAAGGCAGATTCAACATGGAACACATCACCAATGCCTTTGTCCGTCTGTTTTGTAACATaGAAACTGCATGCAATCTTC +
Preference number: 4 (lower is better)
Translates to: AQALKADSTWNTSPMPLSVCFVT*KLHAIF
Trigger: GAAGATTGCATGCAGTTTGCATGTTACAAAACAGAC...GGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp GAAGCTAGAGTCACCTTCAGGTCCCATGAATCATATCTGTTCAAGCCCACAAGTAGTCCCTGGGAGGCCTaGAACAACAAAGATAAGAAA +
Preference number: 4 (lower is better)
Translates to: EARVTFRSHESYLFKPTSSPWEA*NNKDKK
Trigger: TTTCTTATCTTTGTTGTTGCAGGCCTCCCAGGGACT...ACTTGTGGGCTTGAACAGATATGATTCATGGGACCTGAAGGTGACTCTAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp CCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGAGCTTCACATATTCCCTTACTCATGCAGTGCTCTaGCAAGCACTTTACATGTAT +
Preference number: 4 (lower is better)
Translates to: PTGKSGLLVVIQSFTYSLTHAVL*QALYMY
Trigger: ATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGT...AAGGGAATATGTGAAGCTCTGGATCACTACAAGGAGCCCTGACTTACCAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp TTCTTTTTCTTCTTGTCTCTGGAGATGGCCGCTAGTACTCTTCTGCTCTTTATTATACCTCACGCCACCTaGACACCTCAGCTCATTCCA +
Preference number: 4 (lower is better)
Translates to: FFFFLSLEMAASTLLLFIIPHAT*TPQLIP
Trigger: TGGAATGAGCTGAGGTGTGCAGGTGGCGTGAGGTAT...AATAAAGAGCAGAAGAGTACTAGCGGCCATCTCCAGAGACAAGAAGAAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR GCA 90 bp CACTCATCCATCTCTACAGCCACAGTGGTTTTCCTTAGTTGCCTCCAACTTTTACATTCTAGGCTGAGGTaGATGTGTGTATACCTCACG +
Preference number: 4 (lower is better)
Translates to: HSSISTATVVFLSCLQLLHSRLR*MCVYLT
Trigger: CGTGAGGTATACACACATGCACCTCAGCCTAGAATG...TAAAAGTTGGAGGCAACTAAGGAAAACCACTGTGGCTGTAGAGATGGATGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp AACCCACTGGCCAGCTTTAAAGGAAAAGTCTTGATCAGCAACAAGCAAGCGGAGACAGCAGTTGGAACATaGACAGCTTTTCCATGCATT +
Preference number: 4 (lower is better)
Translates to: NPLASFKGKVLISNKQAETAVGT*TAFPCI
Trigger: AATGCATGGAAAAGCTGTCCATGTTCCAACTGCTGT...CTCCGCTTGCTTGTTGCTGATCAAGACTTTTCCTTTAAAGCTGGCCAGTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CCA 90 bp CCACCAACCACAGAGACTCCTGGAATAAAGAAATCAACCCACTGGCCAGCTTTACTTGTTCTAGCAGTCTaGGACTGGAGCATATTGAAA +
Preference number: 4 (lower is better)
Translates to: PPTTETPGIKKSTHWPALLVLAV*DWSILK
Trigger: TTTCAATATGCTCCAGTCCCAGACTGCTAGAACAAG...TAAAGCTGGCCAGTGGGTTGATTTCTTTATTCCAGGAGTCTCTGTGGTTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CCA 90 bp TCATCAGAGCAGCTTTGGGATGAGGCTCCACCATTCTTTCTATCCACTCTAGGGGAAAAAGTCTGTCATTaGAGGTGGGCCACAAATATA +
Preference number: 4 (lower is better)
Translates to: SSEQLWDEAPPFFLSTLGEKVCH*RWATNI
Trigger: TATATTTGTGGCCCACCTCCAATGACAGACTTTTTC...CCCTAGAGTGGATAGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATCCTTGTGTTTTCCAGTTGCTTaGAGAAAAAGTCTGTCATTG +
Preference number: 4 (lower is better)
Translates to: ADCLHQLVDVPLDNPTSLCFPVA*RKSLSL
Trigger: CAATGACAGACTTTTTCTCCAAGCAACTGGAAAACA...CAAGGATGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp CCTGGAGGCTCAGGTACCCCCTTCTGTCCTTATAAATTCACACTCATCCATCTCTGTTCTTTGGGTACATaGTTGTTTTCCAGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: PGGSGTPFCPYKFTLIHLCSLGT*LFSSCL
Trigger: CAAGCAACTGGAAAACAACCATGTACCCAAAGAACA...GAGATGGATGAGTGTGAATTTATAAGGACAGAAGGGGGTACCTGAGCCTCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp GCACACCTCAGCTCATTCCAGGCTCAACATTCCTCCTCTTTTGGGTTTGCCTTAACATTCCTCCTCTTTTaGGTTTGCCTTACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: AHLSSFQAQHSSSFGFALTFLLF*VCLTFV
Trigger: GACAAAAGTAAGGCAAACCCAAAAGAGGAGGAATGT...TAAGGCAAACCCAAAAGAGGAGGAATGTTGAGCCTGGAATGAGCTGAGGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606098.1
3UTR CAA 72 bp GCAAATGTGTTCTTTGGGTACATGGTTGTTTTCCAGTaGCTTGGAGAAAAAGTCTGTCATTGGAGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: ANVFFGYMVVFQ*LGEKVCHWRWA
Trigger: GGCCCACCTCCAATGACAGACTTTTTCTCCAAGCAACTGGAAAACAACCATGTACCCAAAGAACACATTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR TCA 90 bp TGGGTGATTTTTCCTTCAACTTTTAGGAAATCGACTAATCTCAGCATGTGCCTGCTCAAGGTCACTCGGTaGAGCGAAATTCTACGGGAA +
Preference number: 4 (lower is better)
Translates to: WVIFPSTFRKSTNLSMCLLKVTR*SEILRE
Trigger: TTCCCGTAGAATTTCGCTTCACCGAGTGACCTTGAG...CAGGCACATGCTGAGATTAGTCGATTTCCTAAAAGTTGAAGGAAAAATCACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR TCA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCCACCTTCAGGTCCCATaGATCATATCTGTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMIHLQVP*IISVQA
Trigger: GGCTTGAACAGATATGATTCATGGGACCTGAAGGTG...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp CTGTCATTGGAGGTGGGCCACAAATATAGAACAAAGTCTCTTTTGAAATATGATTCTGAGGAGATCTGCTaGGTGCCGCAGGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: LSLEVGHKYRTKSLLKYDSEEIC*VPQDGK
Trigger: CTTTCCATCCTGCGGCACGCAGCAGATCTCCTCAGA...ATCATATTTCAAAAGAGACTTTGTTCTATATTTGTGGCCCACCTCCAATGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR GCA 90 bp CCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGAGCTTCACATATTCCCTTTGGTTGTTTTCCAGTTaGTTGGAGAAAAAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: PTGKSGLLVVIQSFTYSLWLFSS*LEKKSV
Trigger: GACAGACTTTTTCTCCAAGCAACTGGAAAACAACCA...AAGGGAATATGTGAAGCTCTGGATCACTACAAGGAGCCCTGACTTACCAGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp TTCTTTTTCTTCTTGTCTCTGGAGATGGCCGCTAGTACTCTTCTGCTCTTTATTCTGCAGACTCAAAACTaGAACATCGACTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FFFFLSLEMAASTLLLFILQTQN*NIDSCW
Trigger: CCAGCAGGAGTCGATGTTGCAGTTTTGAGTCTGCAG...AATAAAGAGCAGAAGAGTACTAGCGGCCATCTCCAGAGACAAGAAGAAAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp CCACCAACCACAGAGACTCCTGGAATAAAGAAATCAACCCACTGGCCAGCTTTAAAGAAATCAACCCACTaGCCAGCTTTAAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PPTTETPGIKKSTHWPALKKSTH*PALKEK
Trigger: CTTTTCCTTTAAAGCTGGCCAGTGGGTTGATTTCTT...TAAAGCTGGCCAGTGGGTTGATTTCTTTATTCCAGGAGTCTCTGTGGTTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CCA 90 bp ATCAACCCACTGGCCAGCTTTAAAGGAAAAGTCTTGATCAGCAACAAGCAAGCGCTTGTTCTAGCAGTCTaGGACTGGAGCATATTGAAA +
Preference number: 4 (lower is better)
Translates to: INPLASFKGKVLISNKQALVLAV*DWSILK
Trigger: TTTCAATATGCTCCAGTCCCAGACTGCTAGAACAAG...CGCTTGCTTGTTGCTGATCAAGACTTTTCCTTTAAAGCTGGCCAGTGGGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CCA 90 bp GAAGCTAGAGTCACCTTCAGGTCCCATGAATCATATCTGTTCAAGCCCACAAGTGTCTGTCATTGGAGGTaGGCCACAAATATAGAACAA +
Preference number: 4 (lower is better)
Translates to: EARVTFRSHESYLFKPTSVCHWR*ATNIEQ
Trigger: TTGTTCTATATTTGTGGCCCACCTCCAATGACAGAC...ACTTGTGGGCTTGAACAGATATGATTCATGGGACCTGAAGGTGACTCTAGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp GAAGCTAGAGTCACCTTCAGGTCCCATGAATCATATCTGTTCAAGCCCACAAGTAAGGCAGATTCAACATaGAACACATCACCAATGCCT +
Preference number: 4 (lower is better)
Translates to: EARVTFRSHESYLFKPTSKADST*NTSPMP
Trigger: AGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTT...ACTTGTGGGCTTGAACAGATATGATTCATGGGACCTGAAGGTGACTCTAGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp CCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGAGCTTCACATATTCCCTTTACCTATTTTGTGCCTaGCACAGCAATAAACAAGAC +
Preference number: 4 (lower is better)
Translates to: PTGKSGLLVVIQSFTYSLYLFCA*HSNKQD
Trigger: GTCTTGTTTATTGCTGTGCCAGGCACAAAATAGGTA...AAGGGAATATGTGAAGCTCTGGATCACTACAAGGAGCCCTGACTTACCAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp TTGAACATACCCTTTTCTTGTGCAACTTCTTGCTTTGAGCATGATTTTAAATGGAGTGTACACGTATTGTaGACCCAGAGGGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LNIPFSCATSCFEHDFKWSVHVL*TQRAGG
Trigger: CCCTCCTGCCCTCTGGGTTCACAATACGTGTACACT...CCATTTAAAATCATGCTCAAAGCAAGAAGTTGCACAAGAAAAGGGTATGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR TCA 90 bp ATTATAGATGAGGTCATTCTGTATAAGCTGACATGGAAGGAATTACAGGAAATGGAGGCATCCGCAGGCTaGGGGTCAAAGAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: IIDEVILYKLTWKELQEMEASAG*GSKKNS
Trigger: AGAGTTCTTCTTTGACCCTCAGCCTGCGGATGCCTC...CATTTCCTGTAATTCCTTCCATGTCAGCTTATACAGAATGACCTCATCTATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR GCA 90 bp GATCTCTATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCTGGACAGCTTTTCCATaGATTAAAATTCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: DLYAGNLGPRTTCHKRNGWTAFP*IKILTK
Trigger: CTTTGTGAGAATTTTAATGCATGGAAAAGCTGTCCA...GCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAGAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp TTGAACATACCCTTTTCTTGTGCAACTTCTTGCTTTGAGCATGATTTTAAATGGAGGAGATCTGCTGCGTaGCGCAGGATGGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: LNIPFSCATSCFEHDFKWRRSAA*RRMESR
Trigger: TCTGCTTTCCATCCTGCGGCACGCAGCAGATCTCCT...CCATTTAAAATCATGCTCAAAGCAAGAAGTTGCACAAGAAAAGGGTATGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR GCA 90 bp CAGAGGGCAGGAGGGTGGTTCGTATATTTCACTGCCAATTCTATCACTCTCTCTAACATGCAAACTGCATaGAATCTTCTCAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: QRAGGWFVYFTANSITLSNMQTA*NLLRKF
Trigger: GAATTTCCTGAGAAGATTGCATGCAGTTTGCATGTT...AGAGAGAGTGATAGAATTGGCAGTGAAATATACGAACCACCCTCCTGCCCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR GCA 90 bp AACCCAGAGGGCAGGAGGGTGGTTCGTATATTTCACTGCCAATTCTATCACTCTGTCTGTTTTGTAACATaGAAACTGCATGCAATCTTC +
Preference number: 4 (lower is better)
Translates to: NPEGRRVVRIFHCQFYHSVCFVT*KLHAIF
Trigger: GAAGATTGCATGCAGTTTGCATGTTACAAAACAGAC...AGAGTGATAGAATTGGCAGTGAAATATACGAACCACCCTCCTGCCCTCTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR GCA 90 bp ATCAACCCACTGGCCAGCTTTAAAGGAAAAGTCTTGATCAGCAACAAGCAAGCGTGGTTGTTTTCCAGTTaGTTGGAGAAAAAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: INPLASFKGKVLISNKQAWLFSS*LEKKSV
Trigger: GACAGACTTTTTCTCCAAGCAACTGGAAAACAACCA...CGCTTGCTTGTTGCTGATCAAGACTTTTCCTTTAAAGCTGGCCAGTGGGTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR GCA 90 bp GAAGCTAGAGTCACCTTCAGGTCCCATGAATCATATCTGTTCAAGCCCACAAGTATAATCCCACATCCTTaGATCTCATCATGCTCCTAT +
Preference number: 4 (lower is better)
Translates to: EARVTFRSHESYLFKPTSIIPHP*ISSCSY
Trigger: ATAGGAGCATGATGAGATGCAAGGATGTGGGATTAT...ACTTGTGGGCTTGAACAGATATGATTCATGGGACCTGAAGGTGACTCTAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp TCTCAGGAGAATCCTGATGAATCAGATACAAATGCTGTGATGCCATTAATGGGGCATGCCTGTATTTCTTaGCATGGGGCCATATTGAAC +
Preference number: 4 (lower is better)
Translates to: SQENPDESDTNAVMPLMGHACIS*HGAILN
Trigger: GTTCAATATGGCCCCATGGCAAGAAATACAGGCATG...CCCCATTAATGGCATCACAGCATTTGTATCTGATTCATCAGGATTCTCCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp ATTTTTCCTTCAACTTTTAGGAAATCGACTAATCTCAGCATGTGCCTGCAGGCGTCCTTCCGTGATGTATaGCTTGAGTTCCGCATTGAT +
Preference number: 4 (lower is better)
Translates to: IFPSTFRKSTNLSMCLQASFRDV*LEFRID
Trigger: ATCAATGCGGAACTCAAGCCATACATCACGGAAGGA...CGCCTGCAGGCACATGCTGAGATTAGTCGATTTCCTAAAAGTTGAAGGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp GAAGCTAGAGTCACCTTCAGGTCCCATGAATCATATCTGTTCAAGCCCACAAGTGAAAAAGTCTGTCATTaGAGGTGGGCCACAAATATA +
Preference number: 4 (lower is better)
Translates to: EARVTFRSHESYLFKPTSEKVCH*RWATNI
Trigger: TATATTTGTGGCCCACCTCCAATGACAGACTTTTTC...ACTTGTGGGCTTGAACAGATATGATTCATGGGACCTGAAGGTGACTCTAGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCATAAAAGGAATGGCCTaGCCTCAGTCAGGACTTCTT +
Preference number: 4 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMIIKGMA*PQSGLL
Trigger: AAGAAGTCCTGACTGAGGCCAGGCCATTCCTTTTAT...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp TCATCAGAGCAGCTTTGGGATGAGGCTCCACCATTCTTTCTATCCACTCTAGGGGACCATTTCCTTGAATaGATTATGATATTCCCATCA +
Preference number: 4 (lower is better)
Translates to: SSEQLWDEAPPFFLSTLGDHFLE*IMIFPS
Trigger: TGATGGGAATATCATAATCCATTCAAGGAAATGGTC...CCCTAGAGTGGATAGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp ATTATAGATGAGGTCATTCTGTATAAGCTGACATGGAAGGAATTACAGGAAATGACACACCTTAGCTGCTaGCACAATCTCCCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: IIDEVILYKLTWKELQEMTHLSC*HNLPSK
Trigger: CTTCGACGGGAGATTGTGTCAGCAGCTAAGGTGTGT...CATTTCCTGTAATTCCTTCCATGTCAGCTTATACAGAATGACCTCATCTATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR GCA 90 bp CCACCAACCACAGAGACTCCTGGAATAAAGAAATCAACCCACTGGCCAGCTTTATGGACAGCTTTTCCATaGATTAAAATTCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: PPTTETPGIKKSTHWPALWTAFP*IKILTK
Trigger: CTTTGTGAGAATTTTAATGCATGGAAAAGCTGTCCA...TAAAGCTGGCCAGTGGGTTGATTTCTTTATTCCAGGAGTCTCTGTGGTTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR GCA 90 bp CTGTCATTGGAGGTGGGCCACAAATATAGAACAAAGTCTCTTTTGAAATATGATCCGTCGAAGGACACTTaGAGTTCTCTCCATGTGATC +
Preference number: 4 (lower is better)
Translates to: LSLEVGHKYRTKSLLKYDPSKDT*SSLHVI
Trigger: GATCACATGGAGAGAACTGCAAGTGTCCTTCGACGG...ATCATATTTCAAAAGAGACTTTGTTCTATATTTGTGGCCCACCTCCAATGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR GCA 90 bp TGGGTGATTTTTCCTTCAACTTTTAGGAAATCGACTAATCTCAGCATGTGCCTGAATTCCGACTCCTCCTaGAATCAACACGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: WVIFPSTFRKSTNLSMCLNSDSS*NQHEVS
Trigger: AGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATT...CAGGCACATGCTGAGATTAGTCGATTTCCTAAAAGTTGAAGGAAAAATCACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCTTTCTTTTGTTTGCCTaGTCTCTGAGGAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMIFLLFA*SLRRSA
Trigger: AGCAGATCTCCTCAGAGAGCAGGCAAACAAAAGAAA...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR GCA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCTCCATTTCTTTTGTTTaGCTGCTCTCTGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMISISFV*LLSEEI
Trigger: GATCTCCTCAGAGAGCAGGCAAACAAAAGAAATGGA...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCACAGCAGTTGGAACATaGACAGCTTTTCCATGCATT +
Preference number: 4 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMITAVGT*TAFPCI
Trigger: AATGCATGGAAAAGCTGTCCATGTTCCAACTGCTGT...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp CTGGAGCATATTGAAAACCCACCAACCACAGAGACTCCTGGAATAAAGAAATCAACAGCAGTTGGAACATaGACAGCTTTTCCATGCATT +
Preference number: 4 (lower is better)
Translates to: LEHIENPPTTETPGIKKSTAVGT*TAFPCI
Trigger: AATGCATGGAAAAGCTGTCCATGTTCCAACTGCTGT...TGATTTCTTTATTCCAGGAGTCTCTGTGGTTGGTGGGTTTTCAATATGCTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CCA 90 bp TTGAACATACCCTTTTCTTGTGCAACTTCTTGCTTTGAGCATGATTTTAAATGGCAGCAGCACAGGCCATaGCGCTTTCTTAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: LNIPFSCATSCFEHDFKWQQHRP*RFLRSP
Trigger: TGGACTTCTAAGAAAGCGCCATGGCCTGTGCTGCTG...CCATTTAAAATCATGCTCAAAGCAAGAAGTTGCACAAGAAAAGGGTATGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp CAGGAGAATCCTGATGAATCAGATACAAATGCTGTGATGCCATTAATGGGGAGACTTGTTCTAGCAGTCTaGGACTGGAGCATATTGAAA +
Preference number: 4 (lower is better)
Translates to: QENPDESDTNAVMPLMGRLVLAV*DWSILK
Trigger: TTTCAATATGCTCCAGTCCCAGACTGCTAGAACAAG...TCTCCCCATTAATGGCATCACAGCATTTGTATCTGATTCATCAGGATTCTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCCTTGTTCTAGCAGTCTaGGACTGGAGCATATTGAAA +
Preference number: 4 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMILVLAV*DWSILK
Trigger: TTTCAATATGCTCCAGTCCCAGACTGCTAGAACAAG...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CCA 90 bp TTCTCAGCCCTTGACACCCCTTCAGGTGGTAGATTAGCTTTCTATAGTCTGAATTGTTCTTTGGGTACATaGTTGTTTTCCAGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: FSALDTPSGGRLAFYSLNCSLGT*LFSSCL
Trigger: CAAGCAACTGGAAAACAACCATGTACCCAAAGAACA...ATTCAGACTATAGAAAGCTAATCTACCACCTGAAGGGGTGTCAAGGGCTGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442255.5
3UTR CAA 72 bp TCCTTCTCCGTTATTCTTCCTTCCGTGATGTATGGCTaGAGTTCCGCATTGATTTGTGTAGTCTGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: SFSVILPSVMYG*SSALICVVCFV
Trigger: TACAAAACAGACTACACAAATCAATGCGGAACTCAAGCCATACATCACGGAAGGAAGAATAACGGAGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
3UTR CAA 72 bp GGTTGTTTTCCAGTTGCTTGGAGAAAAAGTCTGTCATaGGAGGTGGGCCACAAATATAGAACAAAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: GCFPVAWRKSLS*EVGHKYRTKSL
Trigger: AAGAGACTTTGTTCTATATTTGTGGCCCACCTCCAATGACAGACTTTTTCTCCAAGCAACTGGAAAACAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR TCA 90 bp CACTCATCCATCTCTACAGCCACAGTGGTTTTCCTTAGTTGCCTCCAACTTTTATGCAGAATTGTCCTGTaGTGGTTAATTTTATGTCAG +
Preference number: 4 (lower is better)
Translates to: HSSISTATVVFLSCLQLLCRIVL*WLILCQ
Trigger: CTGACATAAAATTAACCATCACAGGACAATTCTGCA...TAAAAGTTGGAGGCAACTAAGGAAAACCACTGTGGCTGTAGAGATGGATGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR GCA 90 bp TGGAATAAAGAAATCAACCCACTGGCCAGCTTTAAAGGAAAAGTCTTGATCAGCTTTCTTTTGTTTGCCTaGTCTCTGAGGAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: WNKEINPLASFKGKVLISFLLFA*SLRRSA
Trigger: AGCAGATCTCCTCAGAGAGCAGGCAAACAAAAGAAA...GCTGATCAAGACTTTTCCTTTAAAGCTGGCCAGTGGGTTGATTTCTTTATTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR GCA 90 bp CACTCATCCATCTCTACAGCCACAGTGGTTTTCCTTAGTTGCCTCCAACTTTTAGTCTGTTTTGTAACATaGAAACTGCATGCAATCTTC +
Preference number: 4 (lower is better)
Translates to: HSSISTATVVFLSCLQLLVCFVT*KLHAIF
Trigger: GAAGATTGCATGCAGTTTGCATGTTACAAAACAGAC...TAAAAGTTGGAGGCAACTAAGGAAAACCACTGTGGCTGTAGAGATGGATGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR GCA 90 bp ATTTTTCCTTCAACTTTTAGGAAATCGACTAATCTCAGCATGTGCCTGCAGGCGTGGTTGTTTTCCAGTTaGTTGGAGAAAAAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: IFPSTFRKSTNLSMCLQAWLFSS*LEKKSV
Trigger: GACAGACTTTTTCTCCAAGCAACTGGAAAACAACCA...CGCCTGCAGGCACATGCTGAGATTAGTCGATTTCCTAAAAGTTGAAGGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp TCTCAGGAGAATCCTGATGAATCAGATACAAATGCTGTGATGCCATTAATGGGGTGGTTGTTTTCCAGTTaGTTGGAGAAAAAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: SQENPDESDTNAVMPLMGWLFSS*LEKKSV
Trigger: GACAGACTTTTTCTCCAAGCAACTGGAAAACAACCA...CCCCATTAATGGCATCACAGCATTTGTATCTGATTCATCAGGATTCTCCTGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp ATTATAGATGAGGTCATTCTGTATAAGCTGACATGGAAGGAATTACAGGAAATGCTGGTTAGAGTAAGGTaGCGCAAAGTGCTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: IIDEVILYKLTWKELQEMLVRVR*RKVLSV
Trigger: GACACTCAGCACTTTGCGCCACCTTACTCTAACCAG...CATTTCCTGTAATTCCTTCCATGTCAGCTTATACAGAATGACCTCATCTATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp TCTTCCTTCCGTGATGTATGGCTTGAGTTCCGCATTGATTTGTGTAGTCTGTTTAAGAAATCAACCCACTaGCCAGCTTTAAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: SSFRDVWLEFRIDLCSLFKKSTH*PALKEK
Trigger: CTTTTCCTTTAAAGCTGGCCAGTGGGTTGATTTCTT...AAACAGACTACACAAATCAATGCGGAACTCAAGCCATACATCACGGAAGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR CCA 90 bp TGGGTGATTTTTCCTTCAACTTTTAGGAAATCGACTAATCTCAGCATGTGCCTGGTCTGTCATTGGAGGTaGGCCACAAATATAGAACAA +
Preference number: 4 (lower is better)
Translates to: WVIFPSTFRKSTNLSMCLVCHWR*ATNIEQ
Trigger: TTGTTCTATATTTGTGGCCCACCTCCAATGACAGAC...CAGGCACATGCTGAGATTAGTCGATTTCCTAAAAGTTGAAGGAAAAATCACCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCTGTTCTTTGGGTACATaGTTGTTTTCCAGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMICSLGT*LFSSCL
Trigger: CAAGCAACTGGAAAACAACCATGTACCCAAAGAACA...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR TCA 90 bp ATTATAGATGAGGTCATTCTGTATAAGCTGACATGGAAGGAATTACAGGAAATGACTTTTATCTTAGGGTaGCAAGTCCACCTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: IIDEVILYKLTWKELQEMTFILG*QVHLEP
Trigger: TGGCTCCAGGTGGACTTGTCACCCTAAGATAAAAGT...CATTTCCTGTAATTCCTTCCATGTCAGCTTATACAGAATGACCTCATCTATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR GCA 90 bp ACCACAGAGACTCCTGGAATAAAGAAATCAACCCACTGGCCAGCTTTAAAGGAATGGACAGCTTTTCCATaGATTAAAATTCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: TTETPGIKKSTHWPALKEWTAFP*IKILTK
Trigger: CTTTGTGAGAATTTTAATGCATGGAAAAGCTGTCCA...TTCCTTTAAAGCTGGCCAGTGGGTTGATTTCTTTATTCCAGGAGTCTCTGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR GCA 90 bp TGGGTGATTTTTCCTTCAACTTTTAGGAAATCGACTAATCTCAGCATGTGCCTGGTTCGTATATTTCACTaGCAATTCTATCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: WVIFPSTFRKSTNLSMCLVRIFH*QFYHSL
Trigger: GAGAGAGTGATAGAATTGGCAGTGAAATATACGAAC...CAGGCACATGCTGAGATTAGTCGATTTCCTAAAAGTTGAAGGAAAAATCACCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR GCA 90 bp TTCTTTTTCTTCTTGTCTCTGGAGATGGCCGCTAGTACTCTTCTGCTCTTTATTGTTCGTATATTTCACTaGCAATTCTATCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: FFFFLSLEMAASTLLLFIVRIFH*QFYHSL
Trigger: GAGAGAGTGATAGAATTGGCAGTGAAATATACGAAC...AATAAAGAGCAGAAGAGTACTAGCGGCCATCTCCAGAGACAAGAAGAAAAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR GCA 90 bp TGGGTGATTTTTCCTTCAACTTTTAGGAAATCGACTAATCTCAGCATGTGCCTGGTCTGTTTTGTAACATaGAAACTGCATGCAATCTTC +
Preference number: 4 (lower is better)
Translates to: WVIFPSTFRKSTNLSMCLVCFVT*KLHAIF
Trigger: GAAGATTGCATGCAGTTTGCATGTTACAAAACAGAC...CAGGCACATGCTGAGATTAGTCGATTTCCTAAAAGTTGAAGGAAAAATCACCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CCA 90 bp GGATTTTACATCCTCCACAGTCATGTAAGCCAGTTCCTCAAAATGAATCTTTCTAAGAAATCAACCCACTaGCCAGCTTTAAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: GFYILHSHVSQFLKMNLSKKSTH*PALKEK
Trigger: CTTTTCCTTTAAAGCTGGCCAGTGGGTTGATTTCTT...AGAAAGATTCATTTTGAGGAACTGGCTTACATGACTGTGGAGGATGTAAAATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp TTCTTTTTCTTCTTGTCTCTGGAGATGGCCGCTAGTACTCTTCTGCTCTTTATTTTATGTCAGCTTTGTTaGGCTATAGTACTCACTTAC +
Preference number: 4 (lower is better)
Translates to: FFFFLSLEMAASTLLLFILCQLC*AIVLTY
Trigger: GTAAGTGAGTACTATAGCCCAACAAAGCTGACATAA...AATAAAGAGCAGAAGAGTACTAGCGGCCATCTCCAGAGACAAGAAGAAAAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR GCA 90 bp TTGAACATACCCTTTTCTTGTGCAACTTCTTGCTTTGAGCATGATTTTAAATGGTTCTCACAAAGTTCCTaGAGCCAGGAATTAACAAGC +
Preference number: 4 (lower is better)
Translates to: LNIPFSCATSCFEHDFKWFSQSS*SQELTS
Trigger: GCTTGTTAATTCCTGGCTGCAGGAACTTTGTGAGAA...CCATTTAAAATCATGCTCAAAGCAAGAAGTTGCACAAGAAAAGGGTATGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR GCA 90 bp ATTATAGATGAGGTCATTCTGTATAAGCTGACATGGAAGGAATTACAGGAAATGTTTCTTTTGTTTGCCTaGTCTCTGAGGAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: IIDEVILYKLTWKELQEMFLLFA*SLRRSA
Trigger: AGCAGATCTCCTCAGAGAGCAGGCAAACAAAAGAAA...CATTTCCTGTAATTCCTTCCATGTCAGCTTATACAGAATGACCTCATCTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR GCA 90 bp GGATTTTACATCCTCCACAGTCATGTAAGCCAGTTCCTCAAAATGAATCTTTCTTGGACAGCTTTTCCATaGATTAAAATTCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: GFYILHSHVSQFLKMNLSWTAFP*IKILTK
Trigger: CTTTGTGAGAATTTTAATGCATGGAAAAGCTGTCCA...AGAAAGATTCATTTTGAGGAACTGGCTTACATGACTGTGGAGGATGTAAAATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp AAACTTCACAGTCTCTTAGACTTTAGCCAAATTTGTCTCCTTGTAGAAAAGCAAGAAAAAGTCTGTCATTaGAGGTGGGCCACAAATATA +
Preference number: 4 (lower is better)
Translates to: KLHSLLDFSQICLLVEKQEKVCH*RWATNI
Trigger: TATATTTGTGGCCCACCTCCAATGACAGACTTTTTC...TTGCTTTTCTACAAGGAGACAAATTTGGCTAAAGTCTAAGAGACTGTGAAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp ATGTATGGCTTGAGTTCCGCATTGATTTGTGTAGTCTGTTTTGTAACATGCAAATGTTTTCCAGTTGCTTaGAGAAAAAGTCTGTCATTG +
Preference number: 4 (lower is better)
Translates to: MYGLSSALICVVCFVTCKCFPVA*RKSLSL
Trigger: CAATGACAGACTTTTTCTCCAAGCAACTGGAAAACA...TTTGCATGTTACAAAACAGACTACACAAATCAATGCGGAACTCAAGCCATACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR GCA 90 bp ATTATAGATGAGGTCATTCTGTATAAGCTGACATGGAAGGAATTACAGGAAATGAACATGCAAACTGCATaGAATCTTCTCAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: IIDEVILYKLTWKELQEMNMQTA*NLLRKF
Trigger: GAATTTCCTGAGAAGATTGCATGCAGTTTGCATGTT...CATTTCCTGTAATTCCTTCCATGTCAGCTTATACAGAATGACCTCATCTATAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp AAACTTCACAGTCTCTTAGACTTTAGCCAAATTTGTCTCCTTGTAGAAAAGCAATGTTTTCCAGTTGCTTaGAGAAAAAGTCTGTCATTG +
Preference number: 4 (lower is better)
Translates to: KLHSLLDFSQICLLVEKQCFPVA*RKSLSL
Trigger: CAATGACAGACTTTTTCTCCAAGCAACTGGAAAACA...TTGCTTTTCTACAAGGAGACAAATTTGGCTAAAGTCTAAGAGACTGTGAAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CCA 90 bp TTGAACATACCCTTTTCTTGTGCAACTTCTTGCTTTGAGCATGATTTTAAATGGCTGTATAAGCTGACATaGAAGGAATTACAGGAAATG +
Preference number: 4 (lower is better)
Translates to: LNIPFSCATSCFEHDFKWLYKLT*KELQEM
Trigger: CATTTCCTGTAATTCCTTCCATGTCAGCTTATACAG...CCATTTAAAATCATGCTCAAAGCAAGAAGTTGCACAAGAAAAGGGTATGTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS GCA 90 bp GCTGCTCTCGCCTCCCCACCCCGCCTTTCCCGAGGGCCGGGAGGCTaGTACCTAGCACCTGCTGCAGCCTTCAGCGGGCTATTTAAGGCG +
Preference number: 5 (lower is better)
Translates to: AALASPPRLSRGPGG*YLAPAAAFSGLFKA
Trigger: CGCCTTAAATAGCCCGCTGAAGGCTGCAGCAGGTGCTAGGTAGCAGCCTCCCGGCCCTCGGGAAAGGCGGGGTGGGGAGGCGAGAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000285083.10
ENST00000435829.6
ENST00000442255.5
ENST00000452581.5
ENST00000486267.5
ENST00000605932.5
ENST00000627468.2
CDS GCA 90 bp GAACTGTTCGTCCGTCACCAGGAAGGGAGGTCGAGGAGGCTAAGCTaGTCTCGCCTCCCCACCCCGCCTTTCCCGAGGGCCGGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: ELFVRHQEGRSRRLS*SRLPTPPFPRAGRL
Trigger: CAGCCTCCCGGCCCTCGGGAAAGGCGGGGTGGGGAGGCGAGAGCAGCTTAGCCTCCTCGACCTCCCTTCCTGGTGACGGACGAACAGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000285083.10
ENST00000435829.6
ENST00000442255.5
ENST00000452581.5
ENST00000486267.5
ENST00000605932.5
ENST00000627468.2
CDS-3UTR CAA 90 bp GGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTCCGCTGGCACCTAGCTaGCAGACCCGGCCACGTTTA +
Preference number: 5 (lower is better)
Translates to: GADGWTTASSSKMASLTSPLAPS*QTRPRL
Trigger: TAAACGTGGCCGGGTCTGCAAGCTAGGTGCCAGCGG...AGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGCCGCTGGCACCTAGCTaGCAGACCCGGCCACGTTTA +
Preference number: 5 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQPLAPS*QTRPRL
Trigger: TAAACGTGGCCGGGTCTGCAAGCTAGGTGCCAGCGG...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp CAAGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTCATCATCCGCTGGCACCTAGCTaGCAGACCCGGCCACGTTTA +
Preference number: 5 (lower is better)
Translates to: QDGISHVCCLAGPQVSHHPLAPS*QTRPRL
Trigger: TAAACGTGGCCGGGTCTGCAAGCTAGGTGCCAGCGG...ATGATGAGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp GCCCAGGCACTGAAGGCAGATTCAACATGGAACACATCACCAATGCCTTTGTCCCCGCTGGCACCTAGCTaGCAGACCCGGCCACGTTTA +
Preference number: 5 (lower is better)
Translates to: AQALKADSTWNTSPMPLSPLAPS*QTRPRL
Trigger: TAAACGTGGCCGGGTCTGCAAGCTAGGTGCCAGCGG...GGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATCTATGCAGGCAACCTaGGGCCCAGGACTACTTGTC +
Preference number: 5 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTSMQAT*GPGLLV
Trigger: GACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAGA...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp CAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGTTGGATGTACAGCAGTaGGAACATGGACAGCTTTTC +
Preference number: 5 (lower is better)
Translates to: QHVPAGADGWTTASSSKMLDVQQ*EHGQLF
Trigger: GAAAAGCTGTCCATGTTCCAACTGCTGTACATCCAA...CATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp ATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTCCCGTCGAAGGACACTaGCAGTTCTCTCCATGTGAT +
Preference number: 5 (lower is better)
Translates to: MGGPQLAAPRWHLSRLLLPVEGH*QFSPCD
Trigger: ATCACATGGAGAGAACTGCAAGTGTCCTTCGACGGG...AAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp GATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTCATCATCCGTGGGACTGGAGCATATaGAAAACCCACCAACCACAG +
Preference number: 5 (lower is better)
Translates to: DGISHVCCLAGPQVSHHPWDWSI*KTHQPQ
Trigger: CTGTGGTTGGTGGGTTTTCAATATGCTCCAGTCCCA...CGGATGATGAGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS GCA 90 bp AATTCTTTTTCTTCTTGTCTCTGGAGATGGCCGCTAGTACTCTTCTaGCCTCAGAGCTCCCCACAGGATCAGACTGAGCCGCTGGTCACG +
Preference number: 5 (lower is better)
Translates to: NSFSSCLWRWPLVLF*PQSSPQDQTEPLVT
Trigger: CGTGACCAGCGGCTCAGTCTGATCCTGTGGGGAGCTCTGAGGGCAGAAGAGTACTAGCGGCCATCTCCAGAGACAAGAAGAAAAAGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607329.1
CDS-3UTR CAA 90 bp ATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTTGGGACTGGAGCATATaGAAAACCCACCAACCACAG +
Preference number: 5 (lower is better)
Translates to: MGGPQLAAPRWHLSRLLLWDWSI*KTHQPQ
Trigger: CTGTGGTTGGTGGGTTTTCAATATGCTCCAGTCCCA...AAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp TCATCAGAGCAGCTTTGGGATGAGGCTCCACCATTCTTTCTATCCACTCTAGGGCTCAGCCTGGGCACTTaGGGGCCAACTGGTAAGTCA +
Preference number: 5 (lower is better)
Translates to: SSEQLWDEAPPFFLSTLGLSLGT*GPTGKS
Trigger: TGACTTACCAGTTGGCCCCAAAGTGCCCAGGCTGAG...CCCTAGAGTGGATAGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp GATCTCTATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTCAGCCTGGGCACTTaGGGGCCAACTGGTAAGTCA +
Preference number: 5 (lower is better)
Translates to: DLYAGNLGPRTTCHKRNGLSLGT*GPTGKS
Trigger: TGACTTACCAGTTGGCCCCAAAGTGCCCAGGCTGAG...GCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAGAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp CAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTTTGGATGTACAGCAGTaGGAACATGGACAGCTTTTC +
Preference number: 5 (lower is better)
Translates to: QLQDGISHVCCLAGPQVSLDVQQ*EHGQLF
Trigger: GAAAAGCTGTCCATGTTCCAACTGCTGTACATCCAA...AGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp TCGAGCCTATACTCTGAGCCACCGCACTATGAATTCCAAGCCACTCTGGCTGGATGGGACTGGAGCATATaGAAAACCCACCAACCACAG +
Preference number: 5 (lower is better)
Translates to: SSLYSEPPHYEFQATLAGWDWSI*KTHQPQ
Trigger: CTGTGGTTGGTGGGTTTTCAATATGCTCCAGTCCCA...TCCAGCCAGAGTGGCTTGGAATTCATAGTGCGGTGGCTCAGAGTATAGGCTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp CAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACATCCGTGATGTATGGCTaGAGTTCCGCATTGATTTGT +
Preference number: 5 (lower is better)
Translates to: QLAAPRWHLSRLLLSRATSVMYG*SSALIC
Trigger: ACAAATCAATGCGGAACTCAAGCCATACATCACGGA...TGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp GATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACAGGTCTCTCATCATCCGTCCGTGATGTATGGCTaGAGTTCCGCATTGATTTGT +
Preference number: 5 (lower is better)
Translates to: DGISHVCCLAGPQVSHHPSVMYG*SSALIC
Trigger: ACAAATCAATGCGGAACTCAAGCCATACATCACGGA...CGGATGATGAGAGACCTGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGTCTTTGGGTACATGGTaGTTTTCCAGTTGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQSLGTW*FSSCLE
Trigger: CTCCAAGCAACTGGAAAACAACCATGTACCCAAAGA...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp GCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTTCTTTGGGTACATGGTaGTTTTCCAGTTGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: ADGWTTASSSKMASLTSASLGTW*FSSCLE
Trigger: CTCCAAGCAACTGGAAAACAACCATGTACCCAAAGA...AGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp TATTCTTCCTTCCGTGATGTATGGCTTGAGTTCCGCATTGATTTGTGTAGTCTGCCGCTGGCACCTAGCTaGCAGACCCGGCCACGTTTA +
Preference number: 5 (lower is better)
Translates to: YSSFRDVWLEFRIDLCSLPLAPS*QTRPRL
Trigger: TAAACGTGGCCGGGTCTGCAAGCTAGGTGCCAGCGG...CAGACTACACAAATCAATGCGGAACTCAAGCCATACATCACGGAAGGAAGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR CAA 90 bp TCATCAGAGCAGCTTTGGGATGAGGCTCCACCATTCTTTCTATCCACTCTAGGGCCCGTCGAAGGACACTaGCAGTTCTCTCCATGTGAT +
Preference number: 5 (lower is better)
Translates to: SSEQLWDEAPPFFLSTLGPVEGH*QFSPCD
Trigger: ATCACATGGAGAGAACTGCAAGTGTCCTTCGACGGG...CCCTAGAGTGGATAGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGTCATATCCATTTCTTTaGTTTGCCTGCTCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQSYPFL*FACSLR
Trigger: CCTCAGAGAGCAGGCAAACAAAAGAAATGGATATGA...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp CAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTAGCAGGGCCACATCATATCCATTTCTTTaGTTTGCCTGCTCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: QLAAPRWHLSRLLLSRATSYPFL*FACSLR
Trigger: CCTCAGAGAGCAGGCAAACAAAAGAAATGGATATGA...TGTGGCCCTGCTAAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp GGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGAGTTCCGCATTGATTaGTGTAGTCTGTTTTGTAAC +
Preference number: 5 (lower is better)
Translates to: GADGWTTASSSKMASLTSEFRID*CSLFCN
Trigger: GTTACAAAACAGACTACACAAATCAATGCGGAACTC...AGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGGGCTTGAGTTCCGCATaGATTTGTGTAGTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQGLSSA*ICVVCF
Trigger: AAAACAGACTACACAAATCAATGCGGAACTCAAGCC...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp GATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTGGCTTGAGTTCCGCATaGATTTGTGTAGTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: DGWTTASSSKMASLTSAAGLSSA*ICVVCF
Trigger: AAAACAGACTACACAAATCAATGCGGAACTCAAGCC...AGCAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp GGCGCTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTAAGCAAATGTGTTCTTaGGGTACATGGTTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: GADGWTTASSSKMASLTSKQMCS*GTWLFS
Trigger: GGAAAACAACCATGTACCCAAAGAACACATTTGCTT...AGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAGCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp CCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGAGCTTCACATATTCCCTTTCTATGCAGGCAACCTaGGGCCCAGGACTACTTGTC +
Preference number: 5 (lower is better)
Translates to: PTGKSGLLVVIQSFTYSLSMQAT*GPGLLV
Trigger: GACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAGA...AAGGGAATATGTGAAGCTCTGGATCACTACAAGGAGCCCTGACTTACCAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp CCGCAGGATGGAAAGCAGAGGGTTAATTCCGACTCCTCCTGCAATCAACACGAGTTTATTTCTCAGCCCTaGACACCCCTTCAGGTGGTA +
Preference number: 5 (lower is better)
Translates to: PQDGKQRVNSDSSCNQHEFISQP*TPLQVV
Trigger: TACCACCTGAAGGGGTGTCAAGGGCTGAGAAATAAA...CTCGTGTTGATTGCAGGAGGAGTCGGAATTAACCCTCTGCTTTCCATCCTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR CAA 90 bp TCGAGCCTATACTCTGAGCCACCGCACTATGAATTCCAAGCCACTCTGGCTGGATTGGATGTACAGCAGTaGGAACATGGACAGCTTTTC +
Preference number: 5 (lower is better)
Translates to: SSLYSEPPHYEFQATLAGLDVQQ*EHGQLF
Trigger: GAAAAGCTGTCCATGTTCCAACTGCTGTACATCCAA...TCCAGCCAGAGTGGCTTGGAATTCATAGTGCGGTGGCTCAGAGTATAGGCTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp GATCTCTATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCTGGGACTGGAGCATATaGAAAACCCACCAACCACAG +
Preference number: 5 (lower is better)
Translates to: DLYAGNLGPRTTCHKRNGWDWSI*KTHQPQ
Trigger: CTGTGGTTGGTGGGTTTTCAATATGCTCCAGTCCCA...GCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp ATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTTCATATCCATTTCTTTaGTTTGCCTGCTCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: MGGPQLAAPRWHLSRLLLSYPFL*FACSLR
Trigger: CCTCAGAGAGCAGGCAAACAAAAGAAATGGATATGA...AAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp GATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTGAGTTCCGCATTGATTaGTGTAGTCTGTTTTGTAAC +
Preference number: 5 (lower is better)
Translates to: DGWTTASSSKMASLTSAAEFRID*CSLFCN
Trigger: GTTACAAAACAGACTACACAAATCAATGCGGAACTC...AGCAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp ACTAATCTCAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTAGCAGCTATGGTTGTTTTCCAGTaGCTTGGAGAAAAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: TNLSMCLQALMGGPQLAAMVVFQ*LGEKVC
Trigger: ACAGACTTTTTCTCCAAGCAACTGGAAAACAACCAT...AGCTGCTAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp CTGATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGATGGTTGTTTTCCAGTaGCTTGGAGAAAAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: LMGGPQLAAPRWHLSRLLMVVFQ*LGEKVC
Trigger: ACAGACTTTTTCTCCAAGCAACTGGAAAACAACCAT...CAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCTCTTTGGGTACATGGTaGTTTTCCAGTTGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLASLGTW*FSSCLE
Trigger: CTCCAAGCAACTGGAAAACAACCATGTACCCAAAGA...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp AGCCTGGGCACTTTGGGGCCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGAAGCAAATGTGTTCTTaGGGTACATGGTTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: SLGTLGPTGKSGLLVVIQKQMCS*GTWLFS
Trigger: GGAAAACAACCATGTACCCAAAGAACACATTTGCTT...CTGGATCACTACAAGGAGCCCTGACTTACCAGTTGGCCCCAAAGTGCCCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp TCGAGCCTATACTCTGAGCCACCGCACTATGAATTCCAAGCCACTCTGGCTGGAGATAATCCCACATCCTaGCATCTCATCATGCTCCTA +
Preference number: 5 (lower is better)
Translates to: SSLYSEPPHYEFQATLAGDNPTS*HLIMLL
Trigger: TAGGAGCATGATGAGATGCAAGGATGTGGGATTATC...TCCAGCCAGAGTGGCTTGGAATTCATAGTGCGGTGGCTCAGAGTATAGGCTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCGATAATCCCACATCCTaGCATCTCATCATGCTCCTA +
Preference number: 5 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLADNPTS*HLIMLL
Trigger: TAGGAGCATGATGAGATGCAAGGATGTGGGATTATC...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp AACATCGACTCCTGCTGGAATATCCAGCCTGCTGGGCTACCCTGCAAACTTTGGGCTACCCTGCAAACTTaGGATTTTACATCCTCCACA +
Preference number: 5 (lower is better)
Translates to: NIDSCWNIQPAGLPCKLWATLQT*DFTSST
Trigger: TGTGGAGGATGTAAAATCCAAAGTTTGCAGGGTAGC...CCAAAGTTTGCAGGGTAGCCCAGCAGGCTGGATATTCCAGCAGGAGTCGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CAA 90 bp AGGAAATCGACTAATCTCAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGATTACACTGAGACTTTaGGATGTACAGCAGTTGGAA +
Preference number: 5 (lower is better)
Translates to: RKSTNLSMCLQALMGGPQITLRL*DVQQLE
Trigger: TTCCAACTGCTGTACATCCAAAAGTCTCAGTGTAAT...CTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGTCGATTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATTTAAAGGAAAAGTCTaGATCAGCAACAAGCAAGCG +
Preference number: 5 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTFKGKV*ISNKQA
Trigger: CGCTTGCTTGTTGCTGATCAAGACTTTTCCTTTAAA...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp ATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTTTTAAAGGAAAAGTCTaGATCAGCAACAAGCAAGCG +
Preference number: 5 (lower is better)
Translates to: MGGPQLAAPRWHLSRLLLFKGKV*ISNKQA
Trigger: CGCTTGCTTGTTGCTGATCAAGACTTTTCCTTTAAA...AAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp GAGGGCAGGAGGGTGGTTCGTATATTTCACTGCCAATTCTATCACTCTCTCTTGTGGGACTGGAGCATATaGAAAACCCACCAACCACAG +
Preference number: 5 (lower is better)
Translates to: EGRRVVRIFHCQFYHSLLWDWSI*KTHQPQ
Trigger: CTGTGGTTGGTGGGTTTTCAATATGCTCCAGTCCCA...CAAGAGAGAGTGATAGAATTGGCAGTGAAATATACGAACCACCCTCCTGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CAA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCTCATATCCATTTCTTTaGTTTGCCTGCTCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLASYPFL*FACSLR
Trigger: CCTCAGAGAGCAGGCAAACAAAAGAAATGGATATGA...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp GGGTTAATTCCGACTCCTCCTGCAATCAACACGAGGTTTCTAGAGGCATCCGCATCTTTGGGTACATGGTaGTTTTCCAGTTGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: GLIPTPPAINTRFLEASASLGTW*FSSCLE
Trigger: CTCCAAGCAACTGGAAAACAACCATGTACCCAAAGA...TGCGGATGCCTCTAGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATTAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR CAA 90 bp ATGGGTGGACCACAGCTAGCAGCTCCAAGATGGCATCTCTCACGTCTGCTGCTTAAGCAAATGTGTTCTTaGGGTACATGGTTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: MGGPQLAAPRWHLSRLLLKQMCS*GTWLFS
Trigger: GGAAAACAACCATGTACCCAAAGAACACATTTGCTT...AAGCAGCAGACGTGAGAGATGCCATCTTGGAGCTGCTAGCTGTGGTCCACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp TCCCCCGCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACAAAGCAAATGTGTTCTTaGGGTACATGGTTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: SPADCLHQLVDVPLDNPTKQMCS*GTWLFS
Trigger: GGAAAACAACCATGTACCCAAAGAACACATTTGCTT...TGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGCGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp GCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATCCTTGAAGGCATCCAGCCTCTaGAAATCCTTTCTGAATAGG +
Preference number: 5 (lower is better)
Translates to: ADCLHQLVDVPLDNPTSLKASSL*KSFLNR
Trigger: CCTATTCAGAAAGGATTTCAAGAGGCTGGATGCCTT...CAAGGATGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp GCACACCTCAGCTCATTCCAGGCTCAACATTCCTCCTCTTTTGGGTTTGCCTTAGCATGCCTGTATTTCTaGCCATGGGGCCATATTGAA +
Preference number: 5 (lower is better)
Translates to: AHLSSFQAQHSSSFGFALACLYF*PWGHIE
Trigger: TTCAATATGGCCCCATGGCAAGAAATACAGGCATGC...TAAGGCAAACCCAAAAGAGGAGGAATGTTGAGCCTGGAATGAGCTGAGGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS CCA 90 bp CTGGGCTGCTTCTACTCTGTTGTACGACTTCTCCCGCTCCCTCACTaGCAGCACATCCTTAATAAGTTACTTGCACGTGAATACTTGTTT +
Preference number: 5 (lower is better)
Translates to: LGCFYSVVRLLPLPH*QHILNKLLAREYLF
Trigger: AAACAAGTATTCACGTGCAAGTAACTTATTAAGGATGTGCTGCCAGTGAGGGAGCGGGAGAAGTCGTACAACAGAGTAGAAGCAGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607329.1
CDS-3UTR CAA 90 bp TCATCAGAGCAGCTTTGGGATGAGGCTCCACCATTCTTTCTATCCACTCTAGGGTTGGATGTACAGCAGTaGGAACATGGACAGCTTTTC +
Preference number: 5 (lower is better)
Translates to: SSEQLWDEAPPFFLSTLGLDVQQ*EHGQLF
Trigger: GAAAAGCTGTCCATGTTCCAACTGCTGTACATCCAA...CCCTAGAGTGGATAGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp TATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCCTGGCCATTACACTGAGACTTTaGGATGTACAGCAGTTGGAA +
Preference number: 5 (lower is better)
Translates to: YAGNLGPRTTCHKRNGLAITLRL*DVQQLE
Trigger: TTCCAACTGCTGTACATCCAAAAGTCTCAGTGTAAT...GGCCAGGCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp AAATCGACTAATCTCAGCATGTGCCTGCAGGCGCTGATGGGTGGACCACAGCTATTTAAAGGAAAAGTCTaGATCAGCAACAAGCAAGCG +
Preference number: 5 (lower is better)
Translates to: KSTNLSMCLQALMGGPQLFKGKV*ISNKQA
Trigger: CGCTTGCTTGTTGCTGATCAAGACTTTTCCTTTAAA...TAGCTGTGGTCCACCCATCAGCGCCTGCAGGCACATGCTGAGATTAGTCGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp TCATCAGAGCAGCTTTGGGATGAGGCTCCACCATTCTTTCTATCCACTCTAGGGTCCGTGATGTATGGCTaGAGTTCCGCATTGATTTGT +
Preference number: 5 (lower is better)
Translates to: SSEQLWDEAPPFFLSTLGSVMYG*SSALIC
Trigger: ACAAATCAATGCGGAACTCAAGCCATACATCACGGA...CCCTAGAGTGGATAGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp AACCCACCAACCACAGAGACTCCTGGAATAAAGAAATCAACCCACTGGCCAGCTTCCGTGATGTATGGCTaGAGTTCCGCATTGATTTGT +
Preference number: 5 (lower is better)
Translates to: NPPTTETPGIKKSTHWPASVMYG*SSALIC
Trigger: ACAAATCAATGCGGAACTCAAGCCATACATCACGGA...AGCTGGCCAGTGGGTTGATTTCTTTATTCCAGGAGTCTCTGTGGTTGGTGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR CAA 90 bp CCTGGAGGCTCAGGTACCCCCTTCTGTCCTTATAAATTCACACTCATCCATCTCTCTTTGGGTACATGGTaGTTTTCCAGTTGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: PGGSGTPFCPYKFTLIHLSLGTW*FSSCLE
Trigger: CTCCAAGCAACTGGAAAACAACCATGTACCCAAAGA...GAGATGGATGAGTGTGAATTTATAAGGACAGAAGGGGGTACCTGAGCCTCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CAA 90 bp GATCTCTATGCAGGCAACCTTGGGCCCAGGACTACTTGTCATAAAAGGAATGGCAAGGCATCCAGCCTCTaGAAATCCTTTCTGAATAGG +
Preference number: 5 (lower is better)
Translates to: DLYAGNLGPRTTCHKRNGKASSL*KSFLNR
Trigger: CCTATTCAGAAAGGATTTCAAGAGGCTGGATGCCTT...GCCATTCCTTTTATGACAAGTAGTCCTGGGCCCAAGGTTGCCTGCATAGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp CTGGAGCCAGCATGCCTGTATTTCTTGCCATGGGGCCATATTGAACTTTCCTCTCCTCCTCTTTTGGGTTaGCCTTACTTTTGTCACCAT +
Preference number: 5 (lower is better)
Translates to: LEPACLYFLPWGHIELSSPPLLG*PYFCHH
Trigger: ATGGTGACAAAAGTAAGGCAAACCCAAAAGAGGAGG...AGAGGAAAGTTCAATATGGCCCCATGGCAAGAAATACAGGCATGCTGGCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS GCA 90 bp GCATGCACATTGAAGCTAAGGTGTTACCTTTCCGGGAGTTTGATATaGCTCCCACAACCATCAGCAGGTCGGGTCTCTTTGAAAATTAAC +
Preference number: 5 (lower is better)
Translates to: ACTLKLRCYLSGSLI*LPQPSAGRVSLKIN
Trigger: GTTAATTTTCAAAGAGACCCGACCTGCTGATGGTTGTGGGAGGCATATCAAACTCCCGGAAAGGTAACACCTTAGCTTCAATGTGCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486267.5
CDS-3UTR CAA 90 bp CTGGGACTGGAGCATATTGAAAACCCACCAACCACAGAGACTCCTGGAATAAAGTTGGATGTACAGCAGTaGGAACATGGACAGCTTTTC +
Preference number: 5 (lower is better)
Translates to: LGLEHIENPPTTETPGIKLDVQQ*EHGQLF
Trigger: GAAAAGCTGTCCATGTTCCAACTGCTGTACATCCAA...CTTTATTCCAGGAGTCTCTGTGGTTGGTGGGTTTTCAATATGCTCCAGTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CAA 90 bp GCCCAGGCACTGAAGGCAGATTCAACATGGAACACATCACCAATGCCTTTGTCCATTACACTGAGACTTTaGGATGTACAGCAGTTGGAA +
Preference number: 5 (lower is better)
Translates to: AQALKADSTWNTSPMPLSITLRL*DVQQLE
Trigger: TTCCAACTGCTGTACATCCAAAAGTCTCAGTGTAAT...GGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp CATATTGAAAACCCACCAACCACAGAGACTCCTGGAATAAAGAAATCAACCCACCCCGTCGAAGGACACTaGCAGTTCTCTCCATGTGAT +
Preference number: 5 (lower is better)
Translates to: HIENPPTTETPGIKKSTHPVEGH*QFSPCD
Trigger: ATCACATGGAGAGAACTGCAAGTGTCCTTCGACGGG...GTGGGTTGATTTCTTTATTCCAGGAGTCTCTGTGGTTGGTGGGTTTTCAATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR CAA 90 bp GCAGACTGCCTTCACCAGTTAGTAGACGTGCCCCTTGATAATCCCACATCCTTGTTTAAAGGAAAAGTCTaGATCAGCAACAAGCAAGCG +
Preference number: 5 (lower is better)
Translates to: ADCLHQLVDVPLDNPTSLFKGKV*ISNKQA
Trigger: CGCTTGCTTGTTGCTGATCAAGACTTTTCCTTTAAA...CAAGGATGTGGGATTATCAAGGGGCACGTCTACTAACTGGTGAAGGCAGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp GCCCAGGCACTGAAGGCAGATTCAACATGGAACACATCACCAATGCCTTTGTCCGAGTTCCGCATTGATTaGTGTAGTCTGTTTTGTAAC +
Preference number: 5 (lower is better)
Translates to: AQALKADSTWNTSPMPLSEFRID*CSLFCN
Trigger: GTTACAAAACAGACTACACAAATCAATGCGGAACTC...GGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp GGGTTAATTCCGACTCCTCCTGCAATCAACACGAGGTTTCTAGAGGCATCCGCAGAGTTCCGCATTGATTaGTGTAGTCTGTTTTGTAAC +
Preference number: 5 (lower is better)
Translates to: GLIPTPPAINTRFLEASAEFRID*CSLFCN
Trigger: GTTACAAAACAGACTACACAAATCAATGCGGAACTC...TGCGGATGCCTCTAGAAACCTCGTGTTGATTGCAGGAGGAGTCGGAATTAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS CCA 90 bp TCAAATGACACAGAAGTCTTAATGACTCACCTGGTTAGAGTAAGGTaGCGCAAAGTGCTGAGTGTCAATCTCAGTGACGCAGCCTCAATA +
Preference number: 5 (lower is better)
Translates to: SNDTEVLMTHLVRVR*RKVLSVNLSDAASI
Trigger: TATTGAGGCTGCGTCACTGAGATTGACACTCAGCACTTTGCGCCACCTTACTCTAACCAGGTGAGTCATTAAGACTTCTGTGTCATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486267.5
CDS-3UTR CAA 90 bp GAACCCAGAGGGCAGGAGGGTGGTTCGTATATTTCACTGCCAATTCTATCACTCATTACACTGAGACTTTaGGATGTACAGCAGTTGGAA +
Preference number: 5 (lower is better)
Translates to: EPRGQEGGSYISLPILSLITLRL*DVQQLE
Trigger: TTCCAACTGCTGTACATCCAAAAGTCTCAGTGTAAT...GAGTGATAGAATTGGCAGTGAAATATACGAACCACCCTCCTGCCCTCTGGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CAA 90 bp TGGGTGATTTTTCCTTCAACTTTTAGGAAATCGACTAATCTCAGCATGTGCCTGCCCGTCGAAGGACACTaGCAGTTCTCTCCATGTGAT +
Preference number: 5 (lower is better)
Translates to: WVIFPSTFRKSTNLSMCLPVEGH*QFSPCD
Trigger: ATCACATGGAGAGAACTGCAAGTGTCCTTCGACGGG...CAGGCACATGCTGAGATTAGTCGATTTCCTAAAAGTTGAAGGAAAAATCACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp CCTGGAGGCTCAGGTACCCCCTTCTGTCCTTATAAATTCACACTCATCCATCTCTTTAAAGGAAAAGTCTaGATCAGCAACAAGCAAGCG +
Preference number: 5 (lower is better)
Translates to: PGGSGTPFCPYKFTLIHLFKGKV*ISNKQA
Trigger: CGCTTGCTTGTTGCTGATCAAGACTTTTCCTTTAAA...GAGATGGATGAGTGTGAATTTATAAGGACAGAAGGGGGTACCTGAGCCTCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CAA 90 bp CTGGAGCATATTGAAAACCCACCAACCACAGAGACTCCTGGAATAAAGAAATCATGGGACTGGAGCATATaGAAAACCCACCAACCACAG +
Preference number: 5 (lower is better)
Translates to: LEHIENPPTTETPGIKKSWDWSI*KTHQPQ
Trigger: CTGTGGTTGGTGGGTTTTCAATATGCTCCAGTCCCA...TGATTTCTTTATTCCAGGAGTCTCTGTGGTTGGTGGGTTTTCAATATGCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CAA 90 bp TCATCAGAGCAGCTTTGGGATGAGGCTCCACCATTCTTTCTATCCACTCTAGGGGAGTTCCGCATTGATTaGTGTAGTCTGTTTTGTAAC +
Preference number: 5 (lower is better)
Translates to: SSEQLWDEAPPFFLSTLGEFRID*CSLFCN
Trigger: GTTACAAAACAGACTACACAAATCAATGCGGAACTC...CCCTAGAGTGGATAGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp AACCCAGAGGGCAGGAGGGTGGTTCGTATATTTCACTGCCAATTCTATCACTCTGGCTTGAGTTCCGCATaGATTTGTGTAGTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: NPEGRRVVRIFHCQFYHSGLSSA*ICVVCF
Trigger: AAAACAGACTACACAAATCAATGCGGAACTCAAGCC...AGAGTGATAGAATTGGCAGTGAAATATACGAACCACCCTCCTGCCCTCTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR CAA 90 bp GCCCAGGCACTGAAGGCAGATTCAACATGGAACACATCACCAATGCCTTTGTCCTTGTTTTCCAGTTGCTaGGAGAAAAAGTCTGTCATT +
Preference number: 5 (lower is better)
Translates to: AQALKADSTWNTSPMPLSLFSSC*EKKSVI
Trigger: AATGACAGACTTTTTCTCCAAGCAACTGGAAAACAA...GGACAAAGGCATTGGTGATGTGTTCCATGTTGAATCTGCCTTCAGTGCCTGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp TCATCAGAGCAGCTTTGGGATGAGGCTCCACCATTCTTTCTATCCACTCTAGGGATGGTTGTTTTCCAGTaGCTTGGAGAAAAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: SSEQLWDEAPPFFLSTLGMVVFQ*LGEKVC
Trigger: ACAGACTTTTTCTCCAAGCAACTGGAAAACAACCAT...CCCTAGAGTGGATAGAAAGAATGGTGGAGCCTCATCCCAAAGCTGCTCTGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp TCTTTTTCTTCTTGTCTCTGGAGATGGCCGCTAGTACTCTTCTGCTCTTTATTTTGCCATGGGGCCATATaGAACTTTCCTCTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: SFSSCLWRWPLVLFCSLFCHGAI*NFPLSL
Trigger: GAGGCTCAGAGGAAAGTTCAATATGGCCCCATGGCA...AAATAAAGAGCAGAAGAGTACTAGCGGCCATCTCCAGAGACAAGAAGAAAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CAA 90 bp GCACACCTCAGCTCATTCCAGGCTCAACATTCCTCCTCTTTTGGGTTTGCCTTATTGTTTTCCAGTTGCTaGGAGAAAAAGTCTGTCATT +
Preference number: 5 (lower is better)
Translates to: AHLSSFQAQHSSSFGFALLFSSC*EKKSVI
Trigger: AATGACAGACTTTTTCTCCAAGCAACTGGAAAACAA...TAAGGCAAACCCAAAAGAGGAGGAATGTTGAGCCTGGAATGAGCTGAGGTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CAA 90 bp CTGGGACTGGAGCATATTGAAAACCCACCAACCACAGAGACTCCTGGAATAAAGAAGCAAATGTGTTCTTaGGGTACATGGTTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: LGLEHIENPPTTETPGIKKQMCS*GTWLFS
Trigger: GGAAAACAACCATGTACCCAAAGAACACATTTGCTT...CTTTATTCCAGGAGTCTCTGTGGTTGGTGGGTTTTCAATATGCTCCAGTCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR CAA 90 bp CAGGAGAATCCTGATGAATCAGATACAAATGCTGTGATGCCATTAATGGGGAGATTGGATGTACAGCAGTaGGAACATGGACAGCTTTTC +
Preference number: 5 (lower is better)
Translates to: QENPDESDTNAVMPLMGRLDVQQ*EHGQLF
Trigger: GAAAAGCTGTCCATGTTCCAACTGCTGTACATCCAA...TCTCCCCATTAATGGCATCACAGCATTTGTATCTGATTCATCAGGATTCTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CAA 90 bp GGTTGTTTTCCAGTTGCTTGGAGAAAAAGTCTGTCATTGGAGGTGGGCCACAAAATTACACTGAGACTTTaGGATGTACAGCAGTTGGAA +
Preference number: 5 (lower is better)
Translates to: GCFPVAWRKSLSLEVGHKITLRL*DVQQLE
Trigger: TTCCAACTGCTGTACATCCAAAAGTCTCAGTGTAAT...TTTGTGGCCCACCTCCAATGACAGACTTTTTCTCCAAGCAACTGGAAAACAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR CAA 90 bp GGTTGTTTTCCAGTTGCTTGGAGAAAAAGTCTGTCATTGGAGGTGGGCCACAAATTTAAAGGAAAAGTCTaGATCAGCAACAAGCAAGCG +
Preference number: 5 (lower is better)
Translates to: GCFPVAWRKSLSLEVGHKFKGKV*ISNKQA
Trigger: CGCTTGCTTGTTGCTGATCAAGACTTTTCCTTTAAA...TTTGTGGCCCACCTCCAATGACAGACTTTTTCTCCAAGCAACTGGAAAACAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR CAA 90 bp ATTTTTCCTTCAACTTTTAGGAAATCGACTAATCTCAGCATGTGCCTGCAGGCGTCTTTGGGTACATGGTaGTTTTCCAGTTGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: IFPSTFRKSTNLSMCLQASLGTW*FSSCLE
Trigger: CTCCAAGCAACTGGAAAACAACCATGTACCCAAAGA...CGCCTGCAGGCACATGCTGAGATTAGTCGATTTCCTAAAAGTTGAAGGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp CCAACTGGTAAGTCAGGGCTCCTTGTAGTGATCCAGAGCTTCACATATTCCCTTTGTCCAAACTTAACTTaGATGGACCAAATAAGACTG +
Preference number: 5 (lower is better)
Translates to: PTGKSGLLVVIQSFTYSLCPNLT*MDQIRL
Trigger: CAGTCTTATTTGGTCCATCAAAGTTAAGTTTGGACA...AAGGGAATATGTGAAGCTCTGGATCACTACAAGGAGCCCTGACTTACCAGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp TGGAATAAAGAAATCAACCCACTGGCCAGCTTTAAAGGAAAAGTCTTGATCAGCTTGGATGTACAGCAGTaGGAACATGGACAGCTTTTC +
Preference number: 5 (lower is better)
Translates to: WNKEINPLASFKGKVLISLDVQQ*EHGQLF
Trigger: GAAAAGCTGTCCATGTTCCAACTGCTGTACATCCAA...GCTGATCAAGACTTTTCCTTTAAAGCTGGCCAGTGGGTTGATTTCTTTATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CAA 90 bp ATTATAGATGAGGTCATTCTGTATAAGCTGACATGGAAGGAATTACAGGAAATGCCCGTCGAAGGACACTaGCAGTTCTCTCCATGTGAT +
Preference number: 5 (lower is better)
Translates to: IIDEVILYKLTWKELQEMPVEGH*QFSPCD
Trigger: ATCACATGGAGAGAACTGCAAGTGTCCTTCGACGGG...CATTTCCTGTAATTCCTTCCATGTCAGCTTATACAGAATGACCTCATCTATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CAA 90 bp CAGGAGAATCCTGATGAATCAGATACAAATGCTGTGATGCCATTAATGGGGAGAGGCTTGAGTTCCGCATaGATTTGTGTAGTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: QENPDESDTNAVMPLMGRGLSSA*ICVVCF
Trigger: AAAACAGACTACACAAATCAATGCGGAACTCAAGCC...TCTCCCCATTAATGGCATCACAGCATTTGTATCTGATTCATCAGGATTCTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CAA 90 bp CTGGAGCATATTGAAAACCCACCAACCACAGAGACTCCTGGAATAAAGAAATCATTTAAAGGAAAAGTCTaGATCAGCAACAAGCAAGCG +
Preference number: 5 (lower is better)
Translates to: LEHIENPPTTETPGIKKSFKGKV*ISNKQA
Trigger: CGCTTGCTTGTTGCTGATCAAGACTTTTCCTTTAAA...TGATTTCTTTATTCCAGGAGTCTCTGTGGTTGGTGGGTTTTCAATATGCTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442255.5
ENST00000452581.5
CDS-3UTR CAA 90 bp AAACTTCACAGTCTCTTAGACTTTAGCCAAATTTGTCTCCTTGTAGAAAAGCAATGGGACTGGAGCATATaGAAAACCCACCAACCACAG +
Preference number: 5 (lower is better)
Translates to: KLHSLLDFSQICLLVEKQWDWSI*KTHQPQ
Trigger: CTGTGGTTGGTGGGTTTTCAATATGCTCCAGTCCCA...TTGCTTTTCTACAAGGAGACAAATTTGGCTAAAGTCTAAGAGACTGTGAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CAA 90 bp TTCTTTTTCTTCTTGTCTCTGGAGATGGCCGCTAGTACTCTTCTGCTCTTTATTTCATATCCATTTCTTTaGTTTGCCTGCTCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: FFFFLSLEMAASTLLLFISYPFL*FACSLR
Trigger: CCTCAGAGAGCAGGCAAACAAAAGAAATGGATATGA...AATAAAGAGCAGAAGAGTACTAGCGGCCATCTCCAGAGACAAGAAGAAAAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CAA 90 bp TGGGTGATTTTTCCTTCAACTTTTAGGAAATCGACTAATCTCAGCATGTGCCTGGGCTTGAGTTCCGCATaGATTTGTGTAGTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: WVIFPSTFRKSTNLSMCLGLSSA*ICVVCF
Trigger: AAAACAGACTACACAAATCAATGCGGAACTCAAGCC...CAGGCACATGCTGAGATTAGTCGATTTCCTAAAAGTTGAAGGAAAAATCACCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp AATAACGACAACACACTCATGCAGTGCTCTGCCAAGCACTTTACATGTATGATCATGGTTGTTTTCCAGTaGCTTGGAGAAAAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: NNDNTLMQCSAKHFTCMIMVVFQ*LGEKVC
Trigger: ACAGACTTTTTCTCCAAGCAACTGGAAAACAACCAT...GATCATACATGTAAAGTGCTTGGCAGAGCACTGCATGAGTGTGTTGTCGTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285083.10
ENST00000627468.2
CDS-3UTR CAA 90 bp TCTCAGGAGAATCCTGATGAATCAGATACAAATGCTGTGATGCCATTAATGGGGAAGCAAATGTGTTCTTaGGGTACATGGTTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: SQENPDESDTNAVMPLMGKQMCS*GTWLFS
Trigger: GGAAAACAACCATGTACCCAAAGAACACATTTGCTT...CCCCATTAATGGCATCACAGCATTTGTATCTGATTCATCAGGATTCTCCTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CAA 90 bp TGGGTGATTTTTCCTTCAACTTTTAGGAAATCGACTAATCTCAGCATGTGCCTGATTACACTGAGACTTTaGGATGTACAGCAGTTGGAA +
Preference number: 5 (lower is better)
Translates to: WVIFPSTFRKSTNLSMCLITLRL*DVQQLE
Trigger: TTCCAACTGCTGTACATCCAAAAGTCTCAGTGTAAT...CAGGCACATGCTGAGATTAGTCGATTTCCTAAAAGTTGAAGGAAAAATCACCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp ATTTTTCCTTCAACTTTTAGGAAATCGACTAATCTCAGCATGTGCCTGCAGGCGTTGTTTTCCAGTTGCTaGGAGAAAAAGTCTGTCATT +
Preference number: 5 (lower is better)
Translates to: IFPSTFRKSTNLSMCLQALFSSC*EKKSVI
Trigger: AATGACAGACTTTTTCTCCAAGCAACTGGAAAACAA...CGCCTGCAGGCACATGCTGAGATTAGTCGATTTCCTAAAAGTTGAAGGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000605932.5
CDS-3UTR CAA 90 bp ATTATAGATGAGGTCATTCTGTATAAGCTGACATGGAAGGAATTACAGGAAATGCCCGTGATGTATGGCTaGAGTTCCGCATTGATTTGT +
Preference number: 5 (lower is better)
Translates to: IIDEVILYKLTWKELQEMPVMYG*SSALIC
Trigger: ACAAATCAATGCGGAACTCAAGCCATACATCACGGG...CATTTCCTGTAATTCCTTCCATGTCAGCTTATACAGAATGACCTCATCTATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CAA 90 bp ATGTATGGCTTGAGTTCCGCATTGATTTGTGTAGTCTGTTTTGTAACATGCAAATCATATCCATTTCTTTaGTTTGCCTGCTCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: MYGLSSALICVVCFVTCKSYPFL*FACSLR
Trigger: CCTCAGAGAGCAGGCAAACAAAAGAAATGGATATGA...TTTGCATGTTACAAAACAGACTACACAAATCAATGCGGAACTCAAGCCATACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR CAA 90 bp GGATTTTACATCCTCCACAGTCATGTAAGCCAGTTCCTCAAAATGAATCTTTCTGAGTTCCGCATTGATTaGTGTAGTCTGTTTTGTAAC +
Preference number: 5 (lower is better)
Translates to: GFYILHSHVSQFLKMNLSEFRID*CSLFCN
Trigger: GTTACAAAACAGACTACACAAATCAATGCGGAACTC...AGAAAGATTCATTTTGAGGAACTGGCTTACATGACTGTGGAGGATGTAAAATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CAA 90 bp TGGAATAAAGAAATCAACCCACTGGCCAGCTTTAAAGGAAAAGTCTTGATCAGCTTGTTTTCCAGTTGCTaGGAGAAAAAGTCTGTCATT +
Preference number: 5 (lower is better)
Translates to: WNKEINPLASFKGKVLISLFSSC*EKKSVI
Trigger: AATGACAGACTTTTTCTCCAAGCAACTGGAAAACAA...GCTGATCAAGACTTTTCCTTTAAAGCTGGCCAGTGGGTTGATTTCTTTATTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR CAA 90 bp ATGTATGGCTTGAGTTCCGCATTGATTTGTGTAGTCTGTTTTGTAACATGCAAAATGGTTGTTTTCCAGTaGCTTGGAGAAAAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: MYGLSSALICVVCFVTCKMVVFQ*LGEKVC
Trigger: ACAGACTTTTTCTCCAAGCAACTGGAAAACAACCAT...TTTGCATGTTACAAAACAGACTACACAAATCAATGCGGAACTCAAGCCATACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000442255.5
CDS-3UTR CAA 90 bp GGATTTTACATCCTCCACAGTCATGTAAGCCAGTTCCTCAAAATGAATCTTTCTAACGAGAAAATTAAGTaGCAGAATTGTCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: GFYILHSHVSQFLKMNLSNEKIK*QNCPVM
Trigger: CATCACAGGACAATTCTGCAACTTAATTTTCTCGTT...AGAAAGATTCATTTTGAGGAACTGGCTTACATGACTGTGGAGGATGTAAAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CAA 90 bp AAACTTCACAGTCTCTTAGACTTTAGCCAAATTTGTCTCCTTGTAGAAAAGCAAATTACACTGAGACTTTaGGATGTACAGCAGTTGGAA +
Preference number: 5 (lower is better)
Translates to: KLHSLLDFSQICLLVEKQITLRL*DVQQLE
Trigger: TTCCAACTGCTGTACATCCAAAAGTCTCAGTGTAAT...TTGCTTTTCTACAAGGAGACAAATTTGGCTAAAGTCTAAGAGACTGTGAAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CAA 90 bp TTGAACATACCCTTTTCTTGTGCAACTTCTTGCTTTGAGCATGATTTTAAATGGATGGTTGTTTTCCAGTaGCTTGGAGAAAAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: LNIPFSCATSCFEHDFKWMVVFQ*LGEKVC
Trigger: ACAGACTTTTTCTCCAAGCAACTGGAAAACAACCAT...CCATTTAAAATCATGCTCAAAGCAAGAAGTTGCACAAGAAAAGGGTATGTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS-3UTR CAA 90 bp TTGAACATACCCTTTTCTTGTGCAACTTCTTGCTTTGAGCATGATTTTAAATGGTTTATGTCAGCTTTGTaGGGCTATAGTACTCACTTA +
Preference number: 5 (lower is better)
Translates to: LNIPFSCATSCFEHDFKWFMSAL*GYSTHL
Trigger: TAAGTGAGTACTATAGCCCAACAAAGCTGACATAAA...CCATTTAAAATCATGCTCAAAGCAAGAAGTTGCACAAGAAAAGGGTATGTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS GCA 72 bp GTCCGTCACCAGGAAGGGAGGTCGAGGAGGCTAAGCTaGTCTCGCCTCCCCACCCCGCCTTTCCCGAGGGCC +
Preference number: 6 (lower is better)
Translates to: VRHQEGRSRRLS*SRLPTPPFPRA
Trigger: GGCCCTCGGGAAAGGCGGGGTGGGGAGGCGAGAGCAGCTTAGCCTCCTCGACCTCCCTTCCTGGTGACGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000285083.10
ENST00000435829.6
ENST00000442255.5
ENST00000452581.5
ENST00000486267.5
ENST00000605932.5
ENST00000627468.2
CDS TCA 72 bp GTTGCAGGCGCCTGGAATACTCCGCGGTCCCAGACGTaGCGTAGCAGCGCGGGCGAGCCCCACATTCTATTG +
Preference number: 6 (lower is better)
Translates to: VAGAWNTPRSQT*RSSAGEPHILL
Trigger: CAATAGAATGTGGGGCTCGCCCGCGCTGCTACGTCACGTCTGGGACCGCGGAGTATTCCAGGCGCCTGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627468.2
CDS TCA 72 bp CAAGCTGACCGTCGCCCTGGGCTCAAGGTCACTCGGTaGAGCGAAATTCTACGGGAACTGTTCGTCCGTCAC +
Preference number: 6 (lower is better)
Translates to: QADRRPGLKVTR*SEILRELFVRH
Trigger: GTGACGGACGAACAGTTCCCGTAGAATTTCGCTTCACCGAGTGACCTTGAGCCCAGGGCGACGGTCAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285083.10
ENST00000435829.6
ENST00000442255.5
ENST00000452581.5
ENST00000486267.5
ENST00000605932.5
ENST00000627468.2
CDS GCA 72 bp TCTTCTTGTCTCTGGAGATGGCCGCTAGTACTCTTCTaGCCTCAGAGCTCCCCACAGGATCAGACTGAGCCG +
Preference number: 6 (lower is better)
Translates to: SSCLWRWPLVLF*PQSSPQDQTEP
Trigger: CGGCTCAGTCTGATCCTGTGGGGAGCTCTGAGGGCAGAAGAGTACTAGCGGCCATCTCCAGAGACAAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607329.1
CDS CCA 72 bp GCCCTCAGAGCTCCCCACAGGATCAGACTGAGCCGCTaGTCACGGGATGTTCTTAAAATTGTGTCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: ALRAPHRIRLSR*SRDVLKIVSFL
Trigger: CAGGAAGGACACAATTTTAAGAACATCCCGTGACCAGCGGCTCAGTCTGATCCTGTGGGGAGCTCTGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607329.1
CDS TCA 72 bp TTCTCACAAAGTTCCTGCAGCCAGGAATTAACAAGCTaGCCGTCGCCCTGGGCTCAAGGTCACTCGGTGAAG +
Preference number: 6 (lower is better)
Translates to: FSQSSCSQELTS*PSPWAQGHSVK
Trigger: CTTCACCGAGTGACCTTGAGCCCAGGGCGACGGTCAGCTTGTTAATTCCTGGCTGCAGGAACTTTGTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285083.10
ENST00000435829.6
ENST00000442255.5
ENST00000452581.5
ENST00000486267.5
ENST00000605932.5
ENST00000627468.2
CDS TCA 72 bp AGTAAGGTGGCGCAAAGTGCTGAGTGTCAATCTCAGTaGCGCAGCCTCAATACGGATGGCTCCAACAGAGCA +
Preference number: 6 (lower is better)
Translates to: SKVAQSAECQSQ*RSLNTDGSNRA
Trigger: TGCTCTGTTGGAGCCATCCGTATTGAGGCTGCGTCACTGAGATTGACACTCAGCACTTTGCGCCACCTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285083.10
ENST00000435829.6
ENST00000442255.5
ENST00000452581.5
ENST00000486267.5
ENST00000605932.5
ENST00000606098.1
ENST00000627468.2
CDS TCA 72 bp ACTCTTCTGCCCTCAGAGCTCCCCACAGGATCAGACTaGGCCGCTGGTCACGGGATGTTCTTAAAATTGTGT +
Preference number: 6 (lower is better)
Translates to: TLLPSELPTGSD*AAGHGMFLKLC
Trigger: ACACAATTTTAAGAACATCCCGTGACCAGCGGCTCAGTCTGATCCTGTGGGGAGCTCTGAGGGCAGAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607329.1
CDS CCA 72 bp GCTGGTCACGGGATGTTCTTAAAATTGTGTCCTTCCTaGGCTGCTTCTACTCTGTTGTACGACTTCTCCCGC +
Preference number: 6 (lower is better)
Translates to: AGHGMFLKLCPS*AASTLLYDFSR
Trigger: GCGGGAGAAGTCGTACAACAGAGTAGAAGCAGCCCAGGAAGGACACAATTTTAAGAACATCCCGTGACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607329.1
CDS CAA 72 bp TTAAAATTGTGTCCTTCCTGGGCTGCTTCTACTCTGTaGTACGACTTCTCCCGCTCCCTCACTGGCAGCACA +
Preference number: 6 (lower is better)
Translates to: LKLCPSWAASTL*YDFSRSLTGST
Trigger: TGTGCTGCCAGTGAGGGAGCGGGAGAAGTCGTACAACAGAGTAGAAGCAGCCCAGGAAGGACACAATTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607329.1
CDS GCA 72 bp TTGAAGCTAAGGTGTTACCTTTCCGGGAGTTTGATATaGCTCCCACAACCATCAGCAGGTCGGGTCTCTTTG +
Preference number: 6 (lower is better)
Translates to: LKLRCYLSGSLI*LPQPSAGRVSL
Trigger: CAAAGAGACCCGACCTGCTGATGGTTGTGGGAGGCATATCAAACTCCCGGAAAGGTAACACCTTAGCTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486267.5
CDS GCA 72 bp TCACGGGATGTTCTTAAAATTGTGTCCTTCCTGGGCTaGTTCTACTCTGTTGTACGACTTCTCCCGCTCCCT +
Preference number: 6 (lower is better)
Translates to: SRDVLKIVSFLG*FYSVVRLLPLP
Trigger: AGGGAGCGGGAGAAGTCGTACAACAGAGTAGAAGCAGCCCAGGAAGGACACAATTTTAAGAACATCCCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607329.1
CDS CAA 90 bp GGGATGTTCTTAAAATTGTGTCCTTCCTGGGCTGCTTCTACTCTGTaGTACGACTTCTCCCGCTCCCTCACTGGCAGCACATCCTTAATA +
Preference number: 6 (lower is better)
Translates to: GMFLKLCPSWAASTL*YDFSRSLTGSTSLI
Trigger: TATTAAGGATGTGCTGCCAGTGAGGGAGCGGGAGAAGTCGTACAACAGAGTAGAAGCAGCCCAGGAAGGACACAATTTTAAGAACATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607329.1
CDS CCA 72 bp ACAGAAGTCTTAATGACTCACCTGGTTAGAGTAAGGTaGCGCAAAGTGCTGAGTGTCAATCTCAGTGACGCA +
Preference number: 6 (lower is better)
Translates to: TEVLMTHLVRVR*RKVLSVNLSDA
Trigger: TGCGTCACTGAGATTGACACTCAGCACTTTGCGCCACCTTACTCTAACCAGGTGAGTCATTAAGACTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486267.5
CDS CCA 72 bp TTCTACTCTGTTGTACGACTTCTCCCGCTCCCTCACTaGCAGCACATCCTTAATAAGTTACTTGCACGTGAA +
Preference number: 6 (lower is better)
Translates to: FYSVVRLLPLPH*QHILNKLLARE
Trigger: TTCACGTGCAAGTAACTTATTAAGGATGTGCTGCCAGTGAGGGAGCGGGAGAAGTCGTACAACAGAGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607329.1
CDS CCA 72 bp AGGAATCATAACAGCAGCACAGGCCATGGCGCTTTCTaGGCAAACAGAAAACTTAGAAGTCCACGAGATTTT +
Preference number: 6 (lower is better)
Translates to: RNHNSSTGHGAF*ANRKLRSPRDF
Trigger: AAAATCTCGTGGACTTCTAAGTTTTCTGTTTGCCCAGAAAGCGCCATGGCCTGTGCTGCTGTTATGATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435829.6
ENST00000627468.2
CDS GCA 72 bp GGATGTACAGCAGTTGGAACATGGACAGCTTTTCCATaGATTAAAATTCTCACAAAGTTCCTGCAGCCAGGA +
Preference number: 6 (lower is better)
Translates to: GCTAVGTWTAFP*IKILTKFLQPG
Trigger: TCCTGGCTGCAGGAACTTTGTGAGAATTTTAATGCATGGAAAAGCTGTCCATGTTCCAACTGCTGTACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285083.10
ENST00000435829.6
ENST00000442255.5
ENST00000452581.5
ENST00000486267.5
ENST00000605932.5
ENST00000606098.1
ENST00000627468.2
CDS CCA 72 bp TTCCTTTTGGATTTCATTATGCTGGTTAGAGTAAGGTaGCGCAAAGTGCTGAGTGTCAATCTCAGTGACGCA +
Preference number: 6 (lower is better)
Translates to: FLLDFIMLVRVR*RKVLSVNLSDA
Trigger: TGCGTCACTGAGATTGACACTCAGCACTTTGCGCCACCTTACTCTAACCAGCATAATGAAATCCAAAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285083.10
ENST00000435829.6
ENST00000442255.5
ENST00000605932.5
ENST00000606098.1
ENST00000627468.2
CDS CAA 90 bp CTCCGTTATTCTTCCCGTGATGTATGGCTTGAGTTCCGCATTGATTaGTGTAGTCTGTTTTGTAACATGCAAACTGCATGCAATCTTCTC +
Preference number: 6 (lower is better)
Translates to: LRYSSRDVWLEFRID*CSLFCNMQTACNLL
Trigger: GAGAAGATTGCATGCAGTTTGCATGTTACAAAACAGACTACACAAATCAATGCGGAACTCAAGCCATACATCACGGGAAGAATAACGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS CAA 72 bp ATCTCCTTCTCCGTTATTCTTCCCGTGATGTATGGCTaGAGTTCCGCATTGATTTGTGTAGTCTGTTTTGTA +
Preference number: 6 (lower is better)
Translates to: ISFSVILPVMYG*SSALICVVCFV
Trigger: TACAAAACAGACTACACAAATCAATGCGGAACTCAAGCCATACATCACGGGAAGAATAACGGAGAAGGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606098.1
CDS CAA 72 bp ACAGAATATTTTGGTCCTGCTATTACACTGAGACTTTaGGATGTACAGCAGTTGGAACATGGACAGCTTTTC +
Preference number: 6 (lower is better)
Translates to: TEYFGPAITLRL*DVQQLEHGQLF
Trigger: GAAAAGCTGTCCATGTTCCAACTGCTGTACATCCAAAAGTCTCAGTGTAATAGCAGGACCAAAATATTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285083.10
ENST00000435829.6
ENST00000442255.5
ENST00000452581.5
ENST00000486267.5
ENST00000605932.5
ENST00000606098.1
ENST00000627468.2
CDS TCA 72 bp CACGAGATTTTAGGAGTCATTAAGTATATGGTCAGCTaGTTGACAGAATATTTTGGTCCTGCTATTACACTG +
Preference number: 6 (lower is better)
Translates to: HEILGVIKYMVS*LTEYFGPAITL
Trigger: CAGTGTAATAGCAGGACCAAAATATTCTGTCAATCAGCTGACCATATACTTAATGACTCCTAAAATCTCGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285083.10
ENST00000435829.6
ENST00000442255.5
ENST00000452581.5
ENST00000486267.5
ENST00000605932.5
ENST00000606098.1
ENST00000627468.2