RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OXA1L (Homo sapiens)

Ensembl gene IDs: ENSG00000155463

Ensembl transcript IDs: ENST00000285848.9, ENST00000358043.5, ENST00000412791.5, ENST00000431881.6, ENST00000442110.6, ENST00000473744.5, ENST00000481218.1, ENST00000483939.6, ENST00000495424.5, ENST00000556473.1, ENST00000557299.5, ENST00000612549.6

Found 318 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAAGTGATTGTGGATCCTGGCTGCCTCTCGCTGGCCCGTCACGATaGGAGGAAAAATCAGGCAGCGGGCAAAGACTGTACATGCAGCAA +
Preference number: 1 (lower is better)
Translates to: ASDCGSWLPLAGPSR*EEKSGSGQRLYMQQ
Trigger: TTGCTGCATGTACAGTCTTTGCCCGCTGCCTGATTTTTCCTCTCATCGTGACGGGCCAGCGAGAGGCAGCCAGGATCCACAATCACTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442110.6
3UTR TCA 90 bp TTGGCCTCTCTGATTCGACTGGAAAACTTCTGGATCTCTGGCAAGTaGTTGTGGATCCTGGCTGCCTCTCGCTGGCCCGTCACGATGAGA +
Preference number: 1 (lower is better)
Translates to: LASLIRLENFWISGK*LWILAASRWPVTMR
Trigger: TCTCATCGTGACGGGCCAGCGAGAGGCAGCCAGGATCCACAATCACTTGCCAGAGATCCAGAAGTTTTCCAGTCGAATCAGAGAGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442110.6
3UTR GCA 90 bp ACTGGAAAACTTCTGGATCTCTGGCAAGTGATTGTGGATCCTGGCTaGCTCTCGCTGGCCCGTCACGATGAGAGGAAAAATCAGGCAGCG +
Preference number: 1 (lower is better)
Translates to: TGKLLDLWQVIVDPG*LSLARHDERKNQAA
Trigger: CGCTGCCTGATTTTTCCTCTCATCGTGACGGGCCAGCGAGAGGCAGCCAGGATCCACAATCACTTGCCAGAGATCCAGAAGTTTTCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442110.6
3UTR TCA 90 bp AAGCCTTGTAATACTCAATATGGTCTCCTGCTAACTTGGCCTCTCTaGTTCGACTGGAAAACTTCTGGATCTCTGGCAAGTGATTGTGGA +
Preference number: 1 (lower is better)
Translates to: KPCNTQYGLLLTWPL*FDWKTSGSLASDCG
Trigger: TCCACAATCACTTGCCAGAGATCCAGAAGTTTTCCAGTCGAATCAGAGAGGCCAAGTTAGCAGGAGACCATATTGAGTATTACAAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442110.6
3UTR GCA 90 bp TTAGATACAATCTCAACATTCAACTTATCAGCCACACCTCTAGACTaGAATCCAAATGTGCATAGAACAACACATGCATGGGTTGGAAGT +
Preference number: 1 (lower is better)
Translates to: LDTISTFNLSATPLD*NPNVHRTTHAWVGS
Trigger: ACTTCCAACCCATGCATGTGTTGTTCTATGCACATTTGGATTGCAGTCTAGAGGTGTGGCTGATAAGTTGAATGTTGAGATTGTATCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612549.6
3UTR-3UTR GCA 90 bp GCCTCCCAAGTAGCTGGGAATACAGGCACCCGCCGCCATGCCCGGCTAATTTTTTTGCCCAGGCTGGAGTaGGGTGGTGCGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: ASQVAGNTGTRRHARLIFLPRLE*GGAILA
Trigger: AGCCAAGATCGCACCACCGCACTCCAGCCTGGGCAA...AAAAATTAGCCGGGCATGGCGGCGGGTGCCTGTATTCCCAGCTACTTGGGAGGC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000612549.6
3UTR-3UTR CCA 90 bp TCTCAAAGCAATGAAGAAGGAGATGAAGATTGGGGCCTGAGTCACAGGGAGAATCTGGCTGCCTCTCGCTaGCCCGTCACGATGAGAGGA +
Preference number: 2 (lower is better)
Translates to: SQSNEEGDEDWGLSHRENLAASR*PVTMRG
Trigger: TCCTCTCATCGTGACGGGCCAGCGAGAGGCAGCCAG...ATTCTCCCTGTGACTCAGGCCCCAATCTTCATCTCCTTCTTCATTGCTTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442110.6
3UTR-3UTR CCA 90 bp TTGTGGATCCTGGCTGCCTCTCGCTGGCCCGTCACGATGAGAGGAAAAATCAGGAATTCCAGTAAATTCTaGATCAGTCCCACTGGGGTG +
Preference number: 2 (lower is better)
Translates to: LWILAASRWPVTMRGKIRNSSKF*ISPTGV
Trigger: CACCCCAGTGGGACTGATCCAGAATTTACTGGAATT...CCTGATTTTTCCTCTCATCGTGACGGGCCAGCGAGAGGCAGCCAGGATCCACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442110.6
3UTR-3UTR GCA 90 bp AAAGTGCCATCTCCGAGGAAGCCTTGTAATACTCAATATGGTCTCCTGCTAACTATTGTGGATCCTGGCTaGCTCTCGCTGGCCCGTCAC +
Preference number: 2 (lower is better)
Translates to: KVPSPRKPCNTQYGLLLTIVDPG*LSLARH
Trigger: GTGACGGGCCAGCGAGAGGCAGCCAGGATCCACAAT...AGTTAGCAGGAGACCATATTGAGTATTACAAGGCTTCCTCGGAGATGGCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442110.6
3UTR-3UTR TCA 90 bp AAAGTGCCATCTCCGAGGAAGCCTTGTAATACTCAATATGGTCTCCTGCTAACTTGGATCTCTGGCAAGTaGTTGTGGATCCTGGCTGCC +
Preference number: 2 (lower is better)
Translates to: KVPSPRKPCNTQYGLLLTWISGK*LWILAA
Trigger: GGCAGCCAGGATCCACAATCACTTGCCAGAGATCCA...AGTTAGCAGGAGACCATATTGAGTATTACAAGGCTTCCTCGGAGATGGCACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442110.6
3UTR-3UTR GCA 90 bp AATCCAAATGTGCATAGAACAACACATGCATGGGTTGGAAGTTTAAACTGTTTTGCGATCTTGGCTCACTaGAACCTCCGCCTCTCGGAT +
Preference number: 2 (lower is better)
Translates to: NPNVHRTTHAWVGSLNCFAILAH*NLRLSD
Trigger: ATCCGAGAGGCGGAGGTTGCAGTGAGCCAAGATCGC...AAAACAGTTTAAACTTCCAACCCATGCATGTGTTGTTCTATGCACATTTGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612549.6
3UTR-3UTR GCA 90 bp TCTCCGAGGAAGCCTTGTAATACTCAATATGGTCTCCTGCTAACTTGGCCTCTCAGGCCCAGATCAACATaGATAAATTCCAGTAAATTC +
Preference number: 2 (lower is better)
Translates to: SPRKPCNTQYGLLLTWPLRPRST*INSSKF
Trigger: GAATTTACTGGAATTTATGCATGTTGATCTGGGCCT...GAGAGGCCAAGTTAGCAGGAGACCATATTGAGTATTACAAGGCTTCCTCGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442110.6
3UTR-3UTR GCA 90 bp AATCCAAATGTGCATAGAACAACACATGCATGGGTTGGAAGTTTAAACTGTTTTTTGGCCTCCCAAAAGTaGTGGGATTACTGGCGTGAG +
Preference number: 2 (lower is better)
Translates to: NPNVHRTTHAWVGSLNCFLASQK*WDYWRE
Trigger: CTCACGCCAGTAATCCCAGCACTTTTGGGAGGCCAA...AAAACAGTTTAAACTTCCAACCCATGCATGTGTTGTTCTATGCACATTTGGATT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612549.6
3UTR-3UTR TCA 90 bp GTAGTACAGAGGTTTACTAACTCTGTGAATGGGAAGATCACTTGGCTACCCAGTAATCCGTTTTTAAAATaGACATCTCTGTGTGCCACA +
Preference number: 2 (lower is better)
Translates to: VVQRFTNSVNGKITWLPSNPFLK*TSLCAT
Trigger: TGTGGCACACAGAGATGTTCATTTTAAAAACGGATT...ACTGGGTAGCCAAGTGATCTTCCCATTCACAGAGTTAGTAAACCTCTGTACTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285848.9
ENST00000612549.6
3UTR-3UTR GCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAAAGAGACAGAATTCCTaGCAGAATGCGCACAGAACA +
Preference number: 2 (lower is better)
Translates to: HLATQCSLINISTRVFHEKRQNS*QNAHRT
Trigger: TGTTCTGTGCGCATTCTGGCAGGAATTCTGTCTCTT...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
3UTR-3UTR GCA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCAAGAGACAGAATTCCTaGCAGAATGCGCACAGAACA +
Preference number: 2 (lower is better)
Translates to: LATQCSLINISTRVFHEIKRQNS*QNAHRT
Trigger: TGTTCTGTGCGCATTCTGGCAGGAATTCTGTCTCTT...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
3UTR-3UTR GCA 90 bp CCCTGTTCAATAAGTATCAGGAAGCAGCATGTAGTACAGAGGTTTACTAACTCTCACTTGGCTACCCAGTaGTCTCTTATAAACATAAGT +
Preference number: 2 (lower is better)
Translates to: PCSISIRKQHVVQRFTNSHLATQ*SLINIS
Trigger: ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG...AGAGTTAGTAAACCTCTGTACTACATGCTGCTTCCTGATACTTATTGAACAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612549.6
3UTR-3UTR GCA 90 bp AATCCAAATGTGCATAGAACAACACATGCATGGGTTGGAAGTTTAAACTGTTTTTTCAGTTTTCTGAAGTaGACACTGATTTCCCTGTTC +
Preference number: 2 (lower is better)
Translates to: NPNVHRTTHAWVGSLNCFFSFLK*TLISLF
Trigger: GAACAGGGAAATCAGTGTGCACTTCAGAAAACTGAA...AAAACAGTTTAAACTTCCAACCCATGCATGTGTTGTTCTATGCACATTTGGATT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612549.6
3UTR TCA 72 bp TGTGGATCCTGGCTGCCTCTCGCTGGCCCGTCACGATaGGAGGAAAAATCAGGCAGCGGGCAAAGACTGTAC +
Preference number: 3 (lower is better)
Translates to: CGSWLPLAGPSR*EEKSGSGQRLY
Trigger: GTACAGTCTTTGCCCGCTGCCTGATTTTTCCTCTCATCGTGACGGGCCAGCGAGAGGCAGCCAGGATCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442110.6
3UTR GCA 72 bp CTTCTGGATCTCTGGCAAGTGATTGTGGATCCTGGCTaGCTCTCGCTGGCCCGTCACGATGAGAGGAAAAAT +
Preference number: 3 (lower is better)
Translates to: LLDLWQVIVDPG*LSLARHDERKN
Trigger: ATTTTTCCTCTCATCGTGACGGGCCAGCGAGAGGCAGCCAGGATCCACAATCACTTGCCAGAGATCCAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442110.6
3UTR CCA 72 bp GGCCTCTCTGATTCGACTGGAAAACTTCTGGATCTCTaGCAAGTGATTGTGGATCCTGGCTGCCTCTCGCTG +
Preference number: 3 (lower is better)
Translates to: GLSDSTGKLLDL*QVIVDPGCLSL
Trigger: CAGCGAGAGGCAGCCAGGATCCACAATCACTTGCCAGAGATCCAGAAGTTTTCCAGTCGAATCAGAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442110.6
3UTR GCA 72 bp CTCCCAGGTAGCTGGGACTATGGACAAGCACCACCATaGTCAGCTAACTTTTTAGCAGAGACAAGGTCTCGC +
Preference number: 3 (lower is better)
Translates to: LPGSWDYGQAPP*SANFLAETRSR
Trigger: GCGAGACCTTGTCTCTGCTAAAAAGTTAGCTGAGCATGGTGGTGCTTGTCCATAGTCCCAGCTACCTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612549.6
3UTR CCA 72 bp AGGCCCAGATCAACATGCATAAATTCCAGTAAATTCTaGATCAGTCCCACTGGGGTGTATGACCCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: RPRSTCINSSKF*ISPTGVYDPSP
Trigger: GGGGCTGGGGTCATACACCCCAGTGGGACTGATCCAGAATTTACTGGAATTTATGCATGTTGATCTGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442110.6
3UTR TCA 72 bp AATACTCAATATGGTCTCCTGCTAACTTGGCCTCTCTaGTTCGACTGGAAAACTTCTGGATCTCTGGCAAGT +
Preference number: 3 (lower is better)
Translates to: NTQYGLLLTWPL*FDWKTSGSLAS
Trigger: ACTTGCCAGAGATCCAGAAGTTTTCCAGTCGAATCAGAGAGGCCAAGTTAGCAGGAGACCATATTGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442110.6
3UTR GCA 72 bp ATCTCAACATTCAACTTATCAGCCACACCTCTAGACTaGAATCCAAATGTGCATAGAACAACACATGCATGG +
Preference number: 3 (lower is better)
Translates to: ISTFNLSATPLD*NPNVHRTTHAW
Trigger: CCATGCATGTGTTGTTCTATGCACATTTGGATTGCAGTCTAGAGGTGTGGCTGATAAGTTGAATGTTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR TCA 90 bp ACTTCTGGATCTCTGGCAAGTGATTGTGGATCCTGGCTGCCTCTCGCTGGCCCGAGGTACTGCTGTGGGTaGGGGAGTTGCAGCAACAAC +
Preference number: 4 (lower is better)
Translates to: TSGSLASDCGSWLPLAGPRYCCG*GSCSNN
Trigger: GTTGTTGCTGCAACTCCCTCACCCACAGCAGTACCT...CGGGCCAGCGAGAGGCAGCCAGGATCCACAATCACTTGCCAGAGATCCAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442110.6
CDS-3UTR TCA 90 bp ACTTCTGGATCTCTGGCAAGTGATTGTGGATCCTGGCTGCCTCTCGCTGGCCCGTGGATCTCTGGCAAGTaGTTGTGGATCCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TSGSLASDCGSWLPLAGPWISGK*LWILAA
Trigger: GGCAGCCAGGATCCACAATCACTTGCCAGAGATCCA...CGGGCCAGCGAGAGGCAGCCAGGATCCACAATCACTTGCCAGAGATCCAGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442110.6
CDS-3UTR CCA 90 bp GCCTCCCAAGTAGCTGGGAATACAGGCACCCGCCGCCATGCCCGGCTAATTTTTCCTCAGGTACTGCTGTaGGTGAGGGAGTTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: ASQVAGNTGTRRHARLIFPQVLL*VRELQQ
Trigger: TTGCTGCAACTCCCTCACCCACAGCAGTACCTGAGG...AAAAATTAGCCGGGCATGGCGGCGGGTGCCTGTATTCCCAGCTACTTGGGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAGGCCCTGCGACGCTGTaGACCTGGGTTCCCCGCATC +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRGPATL*TWVPRI
Trigger: GATGCGGGGAACCCAGGTCCACAGCGTCGCAGGGCC...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358043.5
CDS-3UTR TCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGACACATCGGAGGGCCCTaGGAACGAGGCCGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRHIGGP*ERGRGA
Trigger: AGCACCTCGGCCTCGTTCTCAGGGCCCTCCGATGTG...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358043.5
CDS-3UTR GCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGACCATTGCGAGGGCCCTaGGACGCTGTGGACCTGGGT +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRPLRGP*DAVDLG
Trigger: ACCCAGGTCCACAGCGTCGCAGGGCCCTCGCAATGG...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358043.5
CDS-3UTR CCA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTGGCCCTGCGACGCTGTaGACCCGACGCCCGGACTGT +
Preference number: 4 (lower is better)
Translates to: LCEWEDHLATQCSLINISGPATL*TRRPDC
Trigger: ACAGTCCGGGCGTCGGGTCCACAGCGTCGCAGGGCC...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp CTCCCAGGTAGCTGGGACTATGGACAAGCACCACCATGCTCAGCTAACTTTTTAAGTGATTGTGGATCCTaGCTGCCTCTCGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: LPGSWDYGQAPPCSANFLSDCGS*LPLAGP
Trigger: CGGGCCAGCGAGAGGCAGCCAGGATCCACAATCACT...TAAAAAGTTAGCTGAGCATGGTGGTGCTTGTCCATAGTCCCAGCTACCTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGATGGGGCCTGGTTCACTaGGTCAGGGCAGCATCCCGG +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRWGLVH*VRAASR
Trigger: CCGGGATGCTGCCCTGACCCAGTGAACCAGGCCCCA...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358043.5
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGACTGACACCGGGCTGCTaGGCCCATAGTGTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRLTPGC*AHSVGD
Trigger: GTCCCCGACACTATGGGCCCAGCAGCCCGGTGTCAG...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358043.5
CDS-3UTR TCA 90 bp GCCTCCCAAGTAGCTGGGAATACAGGCACCCGCCGCCATGCCCGGCTAATTTTTCTAACTTGGCCTCTCTaGTTCGACTGGAAAACTTCT +
Preference number: 4 (lower is better)
Translates to: ASQVAGNTGTRRHARLIFLTWPL*FDWKTS
Trigger: AGAAGTTTTCCAGTCGAATCAGAGAGGCCAAGTTAG...AAAAATTAGCCGGGCATGGCGGCGGGTGCCTGTATTCCCAGCTACTTGGGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR GCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAGGTTTCCCAAGCCATTaGGAGGGCCCTGCGACGCTG +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRGFPSH*EGPATL
Trigger: CAGCGTCGCAGGGCCCTCGCAATGGCTTGGGAAACC...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp GCCTCCCAAGTAGCTGGGAATACAGGCACCCGCCGCCATGCCCGGCTAATTTTTGAATTCCTGCCAGAATaGGCACAGAACATAAGTCAG +
Preference number: 4 (lower is better)
Translates to: ASQVAGNTGTRRHARLIFEFLPE*AQNISQ
Trigger: CTGACTTATGTTCTGTGCGCATTCTGGCAGGAATTC...AAAAATTAGCCGGGCATGGCGGCGGGTGCCTGTATTCCCAGCTACTTGGGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR GCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAAAGCTGACACCGGGCTaGTGGGCCCATAGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRKLTPG*WAHSVG
Trigger: CCCGACACTATGGGCCCAGCAGCCCGGTGTCAGCTT...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358043.5
CDS-3UTR GCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAAGAACGAGGCCGAGGTaGTCTCGCCAGGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRRTRPR*SRQEPS
Trigger: GCTTGGCTCCTGGCGAGAGCACCTCGGCCTCGTTCT...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358043.5
CDS-3UTR GCA 90 bp GCCTCCCAAGTAGCTGGGAATACAGGCACCCGCCGCCATGCCCGGCTAATTTTTGCCACACCTCTAGACTaGAATCCAAATGTGCATAGA +
Preference number: 4 (lower is better)
Translates to: ASQVAGNTGTRRHARLIFATPLD*NPNVHR
Trigger: TCTATGCACATTTGGATTGCAGTCTAGAGGTGTGGC...AAAAATTAGCCGGGCATGGCGGCGGGTGCCTGTATTCCCAGCTACTTGGGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR CCA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGGCCCTGCGACGCTGTaGACCCGACGCCCGGACTGT +
Preference number: 4 (lower is better)
Translates to: EWEDHLATQCSLINISTRGPATL*TRRPDC
Trigger: ACAGTCCGGGCGTCGGGTCCACAGCGTCGCAGGGCC...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp TGGTCTCCTGCTAACTTGGCCTCTCTGATTCGACTGGAAAACTTCTGGATCTCTAAGGAAGAGGTAGTGTaGGCGACAGCAGCACGGGGC +
Preference number: 4 (lower is better)
Translates to: WSPANLASLIRLENFWISKEEVV*ATAARG
Trigger: GCCCCGTGCTGCTGTCGCCCACACTACCTCTTCCTT...AGAGATCCAGAAGTTTTCCAGTCGAATCAGAGAGGCCAAGTTAGCAGGAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442110.6
CDS-3UTR CCA 90 bp TTGTGGATCCTGGCTGCCTCTCGCTGGCCCGTCACGATGAGAGGAAAAATCAGGTGCTCTGCAGCAGTTTaGACTACATCTGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LWILAASRWPVTMRGKIRCSAAV*TTSAVS
Trigger: AGAGACTGCAGATGTAGTCCAAACTGCTGCAGAGCA...CCTGATTTTTCCTCTCATCGTGACGGGCCAGCGAGAGGCAGCCAGGATCCACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442110.6
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGACTGGCTGCCTCTCGCTaGCCCGTCACGATGAGAGGA +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRLAASR*PVTMRG
Trigger: TCCTCTCATCGTGACGGGCCAGCGAGAGGCAGCCAG...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp ATATGGTCTCCTGCTAACTTGGCCTCTCTGATTCGACTGGAAAACTTCTGGATCCTGGCTGCCTCTCGCTaGCCCGTCACGATGAGAGGA +
Preference number: 4 (lower is better)
Translates to: IWSPANLASLIRLENFWILAASR*PVTMRG
Trigger: TCCTCTCATCGTGACGGGCCAGCGAGAGGCAGCCAG...GATCCAGAAGTTTTCCAGTCGAATCAGAGAGGCCAAGTTAGCAGGAGACCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442110.6
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAAGCTGTCCTGGGGCCTaGTTCACTGGGTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRSCPGA*FTGSGQ
Trigger: CTGCCCTGACCCAGTGAACCAGGCCCCAGGACAGCT...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358043.5
CDS-3UTR TCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAACATTCAGGTCCCGGTaGGCAGGTCAGCGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRTFRSR*AGQRLL
Trigger: CAGCAGACGCTGACCTGCTCACCGGGACCTGAATGT...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358043.5
CDS-3UTR GCA 90 bp GTAGTACAGAGGTTTACTAACTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGGTTTCCCAAGCCATTaGGAGGGCCCTGCGACGCTG +
Preference number: 4 (lower is better)
Translates to: VVQRFTNSVNGKITWLPSGFPSH*EGPATL
Trigger: CAGCGTCGCAGGGCCCTCGCAATGGCTTGGGAAACC...ACTGGGTAGCCAAGTGATCTTCCCATTCACAGAGTTAGTAAACCTCTGTACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285848.9
ENST00000612549.6
CDS-3UTR GCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAATTGTGGATCCTGGCTaGCTCTCGCTGGCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRIVDPG*LSLARH
Trigger: GTGACGGGCCAGCGAGAGGCAGCCAGGATCCACAAT...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp ATATGGTCTCCTGCTAACTTGGCCTCTCTGATTCGACTGGAAAACTTCTGGATCATTGTGGATCCTGGCTaGCTCTCGCTGGCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: IWSPANLASLIRLENFWIIVDPG*LSLARH
Trigger: GTGACGGGCCAGCGAGAGGCAGCCAGGATCCACAAT...GATCCAGAAGTTTTCCAGTCGAATCAGAGAGGCCAAGTTAGCAGGAGACCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442110.6
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAAAGGAAGAGGTAGTGTaGGCGACAGCAGCACGGGGC +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRKEEVV*ATAARG
Trigger: GCCCCGTGCTGCTGTCGCCCACACTACCTCTTCCTT...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAAGTGATTGTGGATCCTaGCTGCCTCTCGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRSDCGS*LPLAGP
Trigger: CGGGCCAGCGAGAGGCAGCCAGGATCCACAATCACT...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp TCTCAAAGCAATGAAGAAGGAGATGAAGATTGGGGCCTGAGTCACAGGGAGAATAGTGATTGTGGATCCTaGCTGCCTCTCGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: SQSNEEGDEDWGLSHRENSDCGS*LPLAGP
Trigger: CGGGCCAGCGAGAGGCAGCCAGGATCCACAATCACT...ATTCTCCCTGTGACTCAGGCCCCAATCTTCATCTCCTTCTTCATTGCTTTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442110.6
CDS-3UTR CCA 90 bp ACTTCTGGATCTCTGGCAAGTGATTGTGGATCCTGGCTGCCTCTCGCTGGCCCGAAACTTCTGGATCTCTaGCAAGTGATTGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: TSGSLASDCGSWLPLAGPKLLDL*QVIVDP
Trigger: AGGATCCACAATCACTTGCCAGAGATCCAGAAGTTT...CGGGCCAGCGAGAGGCAGCCAGGATCCACAATCACTTGCCAGAGATCCAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442110.6
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAGCGACGCTGTGGACCTaGGTTCCCCGCATCTCAGTT +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRATLWT*VPRISV
Trigger: AACTGAGATGCGGGGAACCCAGGTCCACAGCGTCGC...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358043.5
CDS-3UTR TCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAGCTGGCCCGTCACGATaGGAGGAAAAATCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRAGPSR*EEKSGS
Trigger: GCTGCCTGATTTTTCCTCTCATCGTGACGGGCCAGC...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGACATGACCCGAGGTCATaGCATTCAGGTCCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRHDPRS*HSGPGE
Trigger: CTCACCGGGACCTGAATGTCATGACCTCGGGTCATG...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358043.5
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAGGAATAGGAGCCGTGTaGTCAGCGGTTTCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRGIGAV*SAVSQA
Trigger: GGCTTGGGAAACCGCTGACCACACGGCTCCTATTCC...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp GTAGTACAGAGGTTTACTAACTCTGTGAATGGGAAGATCACTTGGCTACCCAGTAGTGATTGTGGATCCTaGCTGCCTCTCGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: VVQRFTNSVNGKITWLPSSDCGS*LPLAGP
Trigger: CGGGCCAGCGAGAGGCAGCCAGGATCCACAATCACT...ACTGGGTAGCCAAGTGATCTTCCCATTCACAGAGTTAGTAAACCTCTGTACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285848.9
ENST00000612549.6
CDS-3UTR TCA 90 bp TCTGATTCGACTGGAAAACTTCTGGATCTCTGGCAAGTGATTGTGGATCCTGGCACAACAGGAGGGGCCTaGACCTGGACTTCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: SDSTGKLLDLWQVIVDPGTTGGA*TWTSAK
Trigger: TTTTGCAGAAGTCCAGGTTCAGGCCCCTCCTGTTGT...GCCAGGATCCACAATCACTTGCCAGAGATCCAGAAGTTTTCCAGTCGAATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442110.6
CDS-3UTR TCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAAGGTACTGCTGTGGGTaGGGGAGTTGCAGCAACAAC +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRRYCCG*GSCSNN
Trigger: GTTGTTGCTGCAACTCCCTCACCCACAGCAGTACCT...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp AAAGTGCCATCTCCGAGGAAGCCTTGTAATACTCAATATGGTCTCCTGCTAACTGCTGGCCCGTCACGATaGGAGGAAAAATCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: KVPSPRKPCNTQYGLLLTAGPSR*EEKSGS
Trigger: GCTGCCTGATTTTTCCTCTCATCGTGACGGGCCAGC...AGTTAGCAGGAGACCATATTGAGTATTACAAGGCTTCCTCGGAGATGGCACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442110.6
CDS-3UTR TCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGATGGATCTCTGGCAAGTaGTTGTGGATCCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRWISGK*LWILAA
Trigger: GGCAGCCAGGATCCACAATCACTTGCCAGAGATCCA...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGATGGGATCGGATACCGTaGGATCCTGGAACCACCAGA +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRWDRIP*DPGTTR
Trigger: TCTGGTGGTTCCAGGATCTCACGGTATCCGATCCCA...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCCCATTGCGAGGGCCCTaGGACGCTGTGGACCCGACG +
Preference number: 4 (lower is better)
Translates to: LATQCSLINISTRVFHEIPLRGP*DAVDPT
Trigger: CGTCGGGTCCACAGCGTCGCAGGGCCCTCGCAATGG...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTATTGTGGATCCTGGCTaGCTCTCGCTGGCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: LCEWEDHLATQCSLINISIVDPG*LSLARH
Trigger: GTGACGGGCCAGCGAGAGGCAGCCAGGATCCACAAT...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGACCTCAGGTACTGCTGTaGGTGAGGGAGTTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRPQVLL*VRELQQ
Trigger: TTGCTGCAACTCCCTCACCCACAGCAGTACCTGAGG...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp TCTCAAAGCAATGAAGAAGGAGATGAAGATTGGGGCCTGAGTCACAGGGAGAATCCTCAGGTACTGCTGTaGGTGAGGGAGTTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: SQSNEEGDEDWGLSHRENPQVLL*VRELQQ
Trigger: TTGCTGCAACTCCCTCACCCACAGCAGTACCTGAGG...ATTCTCCCTGTGACTCAGGCCCCAATCTTCATCTCCTTCTTCATTGCTTTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442110.6
CDS-3UTR CCA 90 bp TCTGATTCGACTGGAAAACTTCTGGATCTCTGGCAAGTGATTGTGGATCCTGGCGAAGGAGATGAAGATTaGGGCCTGAGTCACAGGGAG +
Preference number: 4 (lower is better)
Translates to: SDSTGKLLDLWQVIVDPGEGDED*GLSHRE
Trigger: CTCCCTGTGACTCAGGCCCCAATCTTCATCTCCTTC...GCCAGGATCCACAATCACTTGCCAGAGATCCAGAAGTTTTCCAGTCGAATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442110.6
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAGATACCGTGAGATCCTaGAACCACCAGAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRDTVRS*NHQRPP
Trigger: AGGTGGCCTCTGGTGGTTCCAGGATCTCACGGTATC...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp GTAGTACAGAGGTTTACTAACTCTGTGAATGGGAAGATCACTTGGCTACCCAGTTTTTGGAGGCGGGCATaGAGCCAGAATTGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: VVQRFTNSVNGKITWLPSFWRRA*SQNCSR
Trigger: GCGGCTACAATTCTGGCTTCATGCCCGCCTCCAAAA...ACTGGGTAGCCAAGTGATCTTCCCATTCACAGAGTTAGTAAACCTCTGTACTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285848.9
CDS-3UTR TCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAACAACAGGAGGGGCCTaGACCTGGACTTCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRTTGGA*TWTSAK
Trigger: TTTTGCAGAAGTCCAGGTTCAGGCCCCTCCTGTTGT...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp CTGGTAAAGTGCCATCTCCGAGGAAGCCTTGTAATACTCAATATGGTCTCCTGCATGAAGATTGGGGCCTaGGTCACAGGGAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: LVKCHLRGSLVILNMVSCMKIGA*VTGRMR
Trigger: TCTCATTCTCCCTGTGACTCAGGCCCCAATCTTCAT...GCAGGAGACCATATTGAGTATTACAAGGCTTCCTCGGAGATGGCACTTTACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442110.6
CDS-3UTR TCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGATCACGCTCTCGCAGCTaGCGCGTCATTTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRSRSRS*RVISAF
Trigger: AAATGCTGAAATGACGCGTCAGCTGCGAGAGCGTGA...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000612549.6
CDS-3UTR TCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAGCTGCTAGCTCCAACTaGTTCCGCATGCGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRAASSN*FRMRCS
Trigger: TGAACAACGCATGCGGAATCAGTTGGAGCTAGCAGC...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000612549.6
CDS-3UTR GCA 90 bp TTGTGGATCCTGGCTGCCTCTCGCTGGCCCGTCACGATGAGAGGAAAAATCAGGAGGCCCAGATCAACATaGATAAATTCCAGTAAATTC +
Preference number: 4 (lower is better)
Translates to: LWILAASRWPVTMRGKIRRPRST*INSSKF
Trigger: GAATTTACTGGAATTTATGCATGTTGATCTGGGCCT...CCTGATTTTTCCTCTCATCGTGACGGGCCAGCGAGAGGCAGCCAGGATCCACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442110.6
CDS-3UTR GCA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAATTGTGGATCCTGGCTaGCTCTCGCTGGCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: EWEDHLATQCSLINISTRIVDPG*LSLARH
Trigger: GTGACGGGCCAGCGAGAGGCAGCCAGGATCCACAAT...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGACCAACTGATTCCGCATaGGTTGTTCACGCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRPTDSA*VVHALA
Trigger: TGCGAGAGCGTGAACAACGCATGCGGAATCAGTTGG...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000612549.6
CDS-3UTR GCA 90 bp CTCCCAGGTAGCTGGGACTATGGACAAGCACCACCATGCTCAGCTAACTTTTTACAGCCAAGTGTGTCGTaGCAGGGATACTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: LPGSWDYGQAPPCSANFLQPSVS*QGYFDF
Trigger: AAAGTCAAAGTATCCCTGGCACGACACACTTGGCTG...TAAAAAGTTAGCTGAGCATGGTGGTGCTTGTCCATAGTCCCAGCTACCTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR GCA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGATTGCCCAGGCTGGAGTaGGGTGGTGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: EWEDHLATQCSLINISTRLPRLE*GGAILA
Trigger: AGCCAAGATCGCACCACCGCACTCCAGCCTGGGCAA...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR CCA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTGGAATAGGAGCCGTGTaGTCAGCGGTTTCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: LCEWEDHLATQCSLINISGIGAV*SAVSQA
Trigger: GGCTTGGGAAACCGCTGACCACACGGCTCCTATTCC...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAAAGGAAGAGGTAGTGTaGGCGACAGCAGCACGGGGC +
Preference number: 4 (lower is better)
Translates to: EWEDHLATQCSLINISTRKEEVV*ATAARG
Trigger: GCCCCGTGCTGCTGTCGCCCACACTACCTCTTCCTT...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAACTGGCTGCCTCTCGCTaGCCCGTCACGATGAGAGGA +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHELAASR*PVTMRG
Trigger: TCCTCTCATCGTGACGGGCCAGCGAGAGGCAGCCAG...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAGAAGGAGATGAAGATTaGGGCCTGAGTCACAGGGAG +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHREGDED*GLSHRE
Trigger: CTCCCTGTGACTCAGGCCCCAATCTTCATCTCCTTC...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp GTAGTACAGAGGTTTACTAACTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGATACCGTGAGATCCTaGAACCACCAGAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: VVQRFTNSVNGKITWLPSDTVRS*NHQRPP
Trigger: AGGTGGCCTCTGGTGGTTCCAGGATCTCACGGTATC...ACTGGGTAGCCAAGTGATCTTCCCATTCACAGAGTTAGTAAACCTCTGTACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285848.9
ENST00000612549.6
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAGTCGTAAAGGACCCCTaGCTGCTAGCTCCAACTGAT +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRVVKDP*LLAPTD
Trigger: ATCAGTTGGAGCTAGCAGCCAGGGGTCCTTTACGAC...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000612549.6
CDS-3UTR CCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAGCGGTGGTGCGATCTTaGCTCACTGCAACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHEAVVRS*LTATSA
Trigger: GGCGGAGGTTGCAGTGAGCCAAGATCGCACCACCGC...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR TCA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTAGGTACTGCTGTGGGTaGGGGAGTTGCAGCAACAAC +
Preference number: 4 (lower is better)
Translates to: LCEWEDHLATQCSLINISRYCCG*GSCSNN
Trigger: GTTGTTGCTGCAACTCCCTCACCCACAGCAGTACCT...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAATGAAGATTGGGGCCTaGGTCACAGGGAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRMKIGA*VTGRMR
Trigger: TCTCATTCTCCCTGTGACTCAGGCCCCAATCTTCAT...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTTGGGATCGGATACCGTaGGATCCTGGAACCACCAGA +
Preference number: 4 (lower is better)
Translates to: LCEWEDHLATQCSLINISWDRIP*DPGTTR
Trigger: TCTGGTGGTTCCAGGATCTCACGGTATCCGATCCCA...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAGTGCCAGGGATACTTTaGCTTTGGTTTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRVPGIL*LWFAAA
Trigger: AGCAGCAGCAAACCAAAGTCAAAGTATCCCTGGCAC...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGCCCGGAAGAGGACTTaGTTTTGCGCCTGCGCAGTA +
Preference number: 4 (lower is better)
Translates to: EWEDHLATQCSLINISTRARKRT*FCACAV
Trigger: TACTGCGCAGGCGCAAAAGCAAGTCCTCTTCCGGGC...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285848.9
CDS-3UTR GCA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCGGTTTCCCAAGCCATTaGGAGGGCCCTGCGACGCTG +
Preference number: 4 (lower is better)
Translates to: LATQCSLINISTRVFHEIGFPSH*EGPATL
Trigger: CAGCGTCGCAGGGCCCTCGCAATGGCTTGGGAAACC...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAAGTTCAGCGAAGCTCTaGTCTGCAGCAGTTTGGACT +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRSSAKL*SAAVWT
Trigger: AGTCCAAACTGCTGCAGAGCAGAGCTTCGCTGAACT...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp ATATGGTCTCCTGCTAACTTGGCCTCTCTGATTCGACTGGAAAACTTCTGGATCAGTTCAGCGAAGCTCTaGTCTGCAGCAGTTTGGACT +
Preference number: 4 (lower is better)
Translates to: IWSPANLASLIRLENFWISSAKL*SAAVWT
Trigger: AGTCCAAACTGCTGCAGAGCAGAGCTTCGCTGAACT...GATCCAGAAGTTTTCCAGTCGAATCAGAGAGGCCAAGTTAGCAGGAGACCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442110.6
CDS-3UTR GCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATTGTGGATCCTGGCTaGCTCTCGCTGGCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHEIVDPG*LSLARH
Trigger: GTGACGGGCCAGCGAGAGGCAGCCAGGATCCACAAT...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAACTGCCGTGGGGAAATaGATGGTTATGGGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRTAVGK*MVMGKV
Trigger: AACCTTGCCCATAACCATGCATTTCCCCACGGCAGT...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAAAGTACAGTGCGTACTaGTGGAATCCGGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRKYSAY*WNPETG
Trigger: TCCTGTCTCCGGATTCCAGCAGTACGCACTGTACTT...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTCTGGGACTACAGGTGTaGACCACCACGTGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: LCEWEDHLATQCSLINISLGLQV*TTTCGY
Trigger: ATAGCCACACGTGGTGGTGCACACCTGTAGTCCCAG...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR GCA 90 bp CTCCCAGGTAGCTGGGACTATGGACAAGCACCACCATGCTCAGCTAACTTTTTAGGACAAGCACCACCATaGTCAGCTAACTTTTTAGCA +
Preference number: 4 (lower is better)
Translates to: LPGSWDYGQAPPCSANFLGQAPP*SANFLA
Trigger: TGCTAAAAAGTTAGCTGAGCATGGTGGTGCTTGTCC...TAAAAAGTTAGCTGAGCATGGTGGTGCTTGTCCATAGTCCCAGCTACCTGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR CCA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCCTGGCTGCCTCTCGCTaGCCCGTCACGATGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LATQCSLINISTRVFHEILAASR*PVTMRG
Trigger: TCCTCTCATCGTGACGGGCCAGCGAGAGGCAGCCAG...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGATACAGTGCGTACTGCTaGAATCCGGAGACAGGATAC +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRYSAYC*NPETGY
Trigger: GTATCCTGTCTCCGGATTCCAGCAGTACGCACTGTA...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp GTAGTACAGAGGTTTACTAACTCTGTGAATGGGAAGATCACTTGGCTACCCAGTCCATGTTGGCCAGGATaGTCTCGATCTGCTGACTTC +
Preference number: 4 (lower is better)
Translates to: VVQRFTNSVNGKITWLPSPCWPG*SRSADF
Trigger: GAAGTCAGCAGATCGAGACCATCCTGGCCAACATGG...ACTGGGTAGCCAAGTGATCTTCCCATTCACAGAGTTAGTAAACCTCTGTACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR TCA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAACAGGAGGGGCCTaGACCTGGACTTCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: LCEWEDHLATQCSLINISTTGGA*TWTSAK
Trigger: TTTTGCAGAAGTCCAGGTTCAGGCCCCTCCTGTTGT...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAGCTGGCCCGTCACGATaGGAGGAAAAATCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHEAGPSR*EEKSGS
Trigger: GCTGCCTGATTTTTCCTCTCATCGTGACGGGCCAGC...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGATGGATCTCTGGCAAGTaGTTGTGGATCCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: EWEDHLATQCSLINISTRWISGK*LWILAA
Trigger: GGCAGCCAGGATCCACAATCACTTGCCAGAGATCCA...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTCCAACTGATTCCGCATaGGTTGTTCACGCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: LCEWEDHLATQCSLINISPTDSA*VVHALA
Trigger: TGCGAGAGCGTGAACAACGCATGCGGAATCAGTTGG...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285848.9
ENST00000612549.6
CDS-3UTR GCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGACAGCCAAGTGTGTCGTaGCAGGGATACTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRQPSVS*QGYFDF
Trigger: AAAGTCAAAGTATCCCTGGCACGACACACTTGGCTG...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAGCGATCTTGGCTCACTaGAACCTCCGCCTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHEAILAH*NLRLSD
Trigger: ATCCGAGAGGCGGAGGTTGCAGTGAGCCAAGATCGC...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGATGCTCTGCAGCAGTTTaGACTACATCTGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRCSAAV*TTSAVS
Trigger: AGAGACTGCAGATGTAGTCCAAACTGCTGCAGAGCA...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp TCTGATTCGACTGGAAAACTTCTGGATCTCTGGCAAGTGATTGTGGATCCTGGCAATTCCAGTAAATTCTaGATCAGTCCCACTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SDSTGKLLDLWQVIVDPGNSSKF*ISPTGV
Trigger: CACCCCAGTGGGACTGATCCAGAATTTACTGGAATT...GCCAGGATCCACAATCACTTGCCAGAGATCCAGAAGTTTTCCAGTCGAATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442110.6
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAGGAAATGCATGGTTATaGGCAAGGTTATCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRGNAWL*ARLSGA
Trigger: TGCCCCTGATAACCTTGCCCATAACCATGCATTTCC...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGACCGTGGGGAAATGCATaGTTATGGGCAAGGTTATCA +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRPWGNA*LWARLS
Trigger: TGATAACCTTGCCCATAACCATGCATTTCCCCACGG...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp CTCCCAGGTAGCTGGGACTATGGACAAGCACCACCATGCTCAGCTAACTTTTTATCATGTACAACACGCTaGGGGATTTTAAGTACAGTG +
Preference number: 4 (lower is better)
Translates to: LPGSWDYGQAPPCSANFLSCTTR*GILSTV
Trigger: CACTGTACTTAAAATCCCCCAGCGTGTTGTACATGA...TAAAAAGTTAGCTGAGCATGGTGGTGCTTGTCCATAGTCCCAGCTACCTGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR TCA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAACAACAGGAGGGGCCTaGACCTGGACTTCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: EWEDHLATQCSLINISTRTTGGA*TWTSAK
Trigger: TTTTGCAGAAGTCCAGGTTCAGGCCCCTCCTGTTGT...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGACTAACTTGGCCTCTCTaGTTCGACTGGAAAACTTCT +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRLTWPL*FDWKTS
Trigger: AGAAGTTTTCCAGTCGAATCAGAGAGGCCAAGTTAG...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp ATATGGTCTCCTGCTAACTTGGCCTCTCTGATTCGACTGGAAAACTTCTGGATCCTAACTTGGCCTCTCTaGTTCGACTGGAAAACTTCT +
Preference number: 4 (lower is better)
Translates to: IWSPANLASLIRLENFWILTWPL*FDWKTS
Trigger: AGAAGTTTTCCAGTCGAATCAGAGAGGCCAAGTTAG...GATCCAGAAGTTTTCCAGTCGAATCAGAGAGGCCAAGTTAGCAGGAGACCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442110.6
CDS-3UTR TCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAATGGGATCGGATACCGTaGGATCCTGGAACCACCAGA +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHEWDRIP*DPGTTR
Trigger: TCTGGTGGTTCCAGGATCTCACGGTATCCGATCCCA...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGCTGCTAGCTCCAACTaGTTCCGCATGCGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: EWEDHLATQCSLINISTRAASSN*FRMRCS
Trigger: TGAACAACGCATGCGGAATCAGTTGGAGCTAGCAGC...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285848.9
ENST00000612549.6
CDS-3UTR GCA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACTTGCTTTTGCGCCTaGGCAGTAAGAACCACAACC +
Preference number: 4 (lower is better)
Translates to: LCEWEDHLATQCSLINISTCFCA*AVRTTT
Trigger: GGTTGTGGTTCTTACTGCGCAGGCGCAAAAGCAAGT...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285848.9
CDS-3UTR GCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAGAATTCCTGCCAGAATaGGCACAGAACATAAGTCAG +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHREFLPE*AQNISQ
Trigger: CTGACTTATGTTCTGTGCGCATTCTGGCAGGAATTC...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAAAGAGACAGAATTCCTaGCAGAATGCGCACAGAACA +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRKRQNS*QNAHRT
Trigger: TGTTCTGTGCGCATTCTGGCAGGAATTCTGTCTCTT...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp CCCTGTTCAATAAGTATCAGGAAGCAGCATGTAGTACAGAGGTTTACTAACTCTTTGGCCTCCCAAAAGTaGTGGGATTACTGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: PCSISIRKQHVVQRFTNSLASQK*WDYWRE
Trigger: CTCACGCCAGTAATCCCAGCACTTTTGGGAGGCCAA...AGAGTTAGTAAACCTCTGTACTACATGCTGCTTCCTGATACTTATTGAACAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR CCA 90 bp AATCCAAATGTGCATAGAACAACACATGCATGGGTTGGAAGTTTAAACTGTTTTAAGGAAGAGGTAGTGTaGGCGACAGCAGCACGGGGC +
Preference number: 4 (lower is better)
Translates to: NPNVHRTTHAWVGSLNCFKEEVV*ATAARG
Trigger: GCCCCGTGCTGCTGTCGCCCACACTACCTCTTCCTT...AAAACAGTTTAAACTTCCAACCCATGCATGTGTTGTTCTATGCACATTTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR CCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAACCTCAGGTACTGCTGTaGGTGAGGGAGTTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHEPQVLL*VRELQQ
Trigger: TTGCTGCAACTCCCTCACCCACAGCAGTACCTGAGG...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAAATTCCAGTAAATTCTaGATCAGTCCCACTGGGGTG +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRNSSKF*ISPTGV
Trigger: CACCCCAGTGGGACTGATCCAGAATTTACTGGAATT...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp CCCTGTTCAATAAGTATCAGGAAGCAGCATGTAGTACAGAGGTTTACTAACTCTGTCGTAAAGGACCCCTaGCTGCTAGCTCCAACTGAT +
Preference number: 4 (lower is better)
Translates to: PCSISIRKQHVVQRFTNSVVKDP*LLAPTD
Trigger: ATCAGTTGGAGCTAGCAGCCAGGGGTCCTTTACGAC...AGAGTTAGTAAACCTCTGTACTACATGCTGCTTCCTGATACTTATTGAACAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGATGTAGGAGAGGGTTGTaGGTAAAGGTCTGTCGTAAA +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRCRRGL*VKVCRK
Trigger: TTTACGACAGACCTTTACCCACAACCCTCTCCTACA...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTGCCACTGCGCCTGGGTaGAAGTTTAAACCCTTAATG +
Preference number: 4 (lower is better)
Translates to: LCEWEDHLATQCSLINISATAPG*KFKPLM
Trigger: CATTAAGGGTTTAAACTTCCACCCAGGCGCAGTGGC...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR CCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAAGCCTCCCAGGTAGCTaGGACTATGGACAAGCACCA +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHESLPGS*DYGQAP
Trigger: TGGTGCTTGTCCATAGTCCCAGCTACCTGGGAGGCT...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR TCA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCAGGTACTGCTGTGGGTaGGGGAGTTGCAGCAACAAC +
Preference number: 4 (lower is better)
Translates to: LATQCSLINISTRVFHEIRYCCG*GSCSNN
Trigger: GTTGTTGCTGCAACTCCCTCACCCACAGCAGTACCT...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAATGAAGATTGGGGCCTaGGTCACAGGGAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: EWEDHLATQCSLINISTRMKIGA*VTGRMR
Trigger: TCTCATTCTCCCTGTGACTCAGGCCCCAATCTTCAT...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAACATTTCTCATCCACTaGAGGTCAGAACTTTGCACA +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRTFLIH*RSELCT
Trigger: TGTGCAAAGTTCTGACCTTCAGTGGATGAGAAATGT...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp GTAGTACAGAGGTTTACTAACTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGGTTTACTAACTCTGTaGATGGGAAGATCACTTGGC +
Preference number: 4 (lower is better)
Translates to: VVQRFTNSVNGKITWLPSGLLTL*MGRSLG
Trigger: GCCAAGTGATCTTCCCATTCACAGAGTTAGTAAACC...ACTGGGTAGCCAAGTGATCTTCCCATTCACAGAGTTAGTAAACCTCTGTACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285848.9
ENST00000612549.6
CDS-3UTR TCA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGATGGAGTATAGCAGCATaGTCTTGGATCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: EWEDHLATQCSLINISTRWSIAA*SWITAA
Trigger: GGCTGCAGTGATCCAAGATCATGCTGCTATACTCCA...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR GCA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAAAGAGGACTTGCTTTTaGGCCTGCGCAGTAAGAACC +
Preference number: 4 (lower is better)
Translates to: EWEDHLATQCSLINISTRKRTCF*ACAVRT
Trigger: GGTTCTTACTGCGCAGGCGCAAAAGCAAGTCCTCTT...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285848.9
CDS-3UTR GCA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAAAGTACAGTGCGTACTaGTGGAATCCGGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: EWEDHLATQCSLINISTRKYSAY*WNPETG
Trigger: TCCTGTCTCCGGATTCCAGCAGTACGCACTGTACTT...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp CCCTGTTCAATAAGTATCAGGAAGCAGCATGTAGTACAGAGGTTTACTAACTCTAAGGTCTCGCCATGTTaGCCAGGCTGGTCTCAAATT +
Preference number: 4 (lower is better)
Translates to: PCSISIRKQHVVQRFTNSKVSPC*PGWSQI
Trigger: AATTTGAGACCAGCCTGGGCAACATGGCGAGACCTT...AGAGTTAGTAAACCTCTGTACTACATGCTGCTTCCTGATACTTATTGAACAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR GCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATGATCTTGGATCACTaGAGCCTCAACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHEMILDH*SLNLLG
Trigger: GCCCAGGAGGTTGAGGCTGCAGTGATCCAAGATCAT...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR CCA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTAAAGAGAACGGAGCTTaGCGGCCATATTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LCEWEDHLATQCSLINISKENGA*RPYLKW
Trigger: CCACTTCAAATATGGCCGCCAAGCTCCGTTCTCTTT...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285848.9
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAAAACTTCTGGATCTCTaGCAAGTGATTGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRKLLDL*QVIVDP
Trigger: AGGATCCACAATCACTTGCCAGAGATCCAGAAGTTT...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCGATACCGTGAGATCCTaGAACCACCAGAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: LATQCSLINISTRVFHEIDTVRS*NHQRPP
Trigger: AGGTGGCCTCTGGTGGTTCCAGGATCTCACGGTATC...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTGGAAATGCATGGTTATaGGCAAGGTTATCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LCEWEDHLATQCSLINISGNAWL*ARLSGA
Trigger: TGCCCCTGATAACCTTGCCCATAACCATGCATTTCC...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGATACAGTGCGTACTGCTaGAATCCGGAGACAGGATAC +
Preference number: 4 (lower is better)
Translates to: EWEDHLATQCSLINISTRYSAYC*NPETGY
Trigger: GTATCCTGTCTCCGGATTCCAGCAGTACGCACTGTA...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGATCATGTACAACACGCTaGGGGATTTTAAGTACAGTG +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRSCTTR*GILSTV
Trigger: CACTGTACTTAAAATCCCCCAGCGTGTTGTACATGA...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAGTCGTAAAGGACCCCTaGCTGCTAGCTCCAACTGAT +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHEVVKDP*LLAPTD
Trigger: ATCAGTTGGAGCTAGCAGCCAGGGGTCCTTTACGAC...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285848.9
ENST00000612549.6
CDS-3UTR TCA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTCTAACTTGGCCTCTCTaGTTCGACTGGAAAACTTCT +
Preference number: 4 (lower is better)
Translates to: LCEWEDHLATQCSLINISLTWPL*FDWKTS
Trigger: AGAAGTTTTCCAGTCGAATCAGAGAGGCCAAGTTAG...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATGAAGATTGGGGCCTaGGTCACAGGGAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHEMKIGA*VTGRMR
Trigger: TCTCATTCTCCCTGTGACTCAGGCCCCAATCTTCAT...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp AATCCAAATGTGCATAGAACAACACATGCATGGGTTGGAAGTTTAAACTGTTTTTGGGATCGGATACCGTaGGATCCTGGAACCACCAGA +
Preference number: 4 (lower is better)
Translates to: NPNVHRTTHAWVGSLNCFWDRIP*DPGTTR
Trigger: TCTGGTGGTTCCAGGATCTCACGGTATCCGATCCCA...AAAACAGTTTAAACTTCCAACCCATGCATGTGTTGTTCTATGCACATTTGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR TCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAGTGCCAGGGATACTTTaGCTTTGGTTTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHEVPGIL*LWFAAA
Trigger: AGCAGCAGCAAACCAAAGTCAAAGTATCCCTGGCAC...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCGTCCCATCGCCATTTTaGCCGGAAGAGGACTTGCTT +
Preference number: 4 (lower is better)
Translates to: LATQCSLINISTRVFHEIVPSPF*PEEDLL
Trigger: AAGCAAGTCCTCTTCCGGGCAAAATGGCGATGGGAC...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285848.9
CDS-3UTR GCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAAGTTCAGCGAAGCTCTaGTCTGCAGCAGTTTGGACT +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHESSAKL*SAAVWT
Trigger: AGTCCAAACTGCTGCAGAGCAGAGCTTCGCTGAACT...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAACTGCCGTGGGGAAATaGATGGTTATGGGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHETAVGK*MVMGKV
Trigger: AACCTTGCCCATAACCATGCATTTCCCCACGGCAGT...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTGAATTCCTGCCAGAATaGGCACAGAACATAAGTCAG +
Preference number: 4 (lower is better)
Translates to: LCEWEDHLATQCSLINISEFLPE*AQNISQ
Trigger: CTGACTTATGTTCTGTGCGCATTCTGGCAGGAATTC...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTAAGAGACAGAATTCCTaGCAGAATGCGCACAGAACA +
Preference number: 4 (lower is better)
Translates to: LCEWEDHLATQCSLINISKRQNS*QNAHRT
Trigger: TGTTCTGTGCGCATTCTGGCAGGAATTCTGTCTCTT...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGATTCAGTTTTCTGAAGTaGACACTGATTTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRFSFLK*TLISLF
Trigger: GAACAGGGAAATCAGTGTGCACTTCAGAAAACTGAA...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR GCA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTCTCGGCCTCCCAAAATaGTGGGTATTCTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: LCEWEDHLATQCSLINISLGLPK*WVFFSF
Trigger: AAAACTGAAGAATACCCAGCATTTTGGGAGGCCGAG...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR CCA 90 bp CCCTGTTCAATAAGTATCAGGAAGCAGCATGTAGTACAGAGGTTTACTAACTCTTGCTCTGCAGCAGTTTaGACTACATCTGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PCSISIRKQHVVQRFTNSCSAAV*TTSAVS
Trigger: AGAGACTGCAGATGTAGTCCAAACTGCTGCAGAGCA...AGAGTTAGTAAACCTCTGTACTACATGCTGCTTCCTGATACTTATTGAACAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR CCA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTAATTCCAGTAAATTCTaGATCAGTCCCACTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LCEWEDHLATQCSLINISNSSKF*ISPTGV
Trigger: CACCCCAGTGGGACTGATCCAGAATTTACTGGAATT...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGACCGTGGGGAAATGCATaGTTATGGGCAAGGTTATCA +
Preference number: 4 (lower is better)
Translates to: EWEDHLATQCSLINISTRPWGNA*LWARLS
Trigger: TGATAACCTTGCCCATAACCATGCATTTCCCCACGG...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp CCCTGTTCAATAAGTATCAGGAAGCAGCATGTAGTACAGAGGTTTACTAACTCTCCGTGGGGAAATGCATaGTTATGGGCAAGGTTATCA +
Preference number: 4 (lower is better)
Translates to: PCSISIRKQHVVQRFTNSPWGNA*LWARLS
Trigger: TGATAACCTTGCCCATAACCATGCATTTCCCCACGG...AGAGTTAGTAAACCTCTGTACTACATGCTGCTTCCTGATACTTATTGAACAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR CCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAATACAGTGCGTACTGCTaGAATCCGGAGACAGGATAC +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHEYSAYC*NPETGY
Trigger: GTATCCTGTCTCCGGATTCCAGCAGTACGCACTGTA...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTAATGGGAAGATCACTTaGCTACCCAGTGCTCTCTTA +
Preference number: 4 (lower is better)
Translates to: LCEWEDHLATQCSLINISNGKIT*LPSALL
Trigger: TAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATT...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACATTTCTCATCCACTaGAGGTCAGAACTTTGCACA +
Preference number: 4 (lower is better)
Translates to: LCEWEDHLATQCSLINISTFLIH*RSELCT
Trigger: TGTGCAAAGTTCTGACCTTCAGTGGATGAGAAATGT...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp AATCCAAATGTGCATAGAACAACACATGCATGGGTTGGAAGTTTAAACTGTTTTTCACGCTCTCGCAGCTaGCGCGTCATTTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: NPNVHRTTHAWVGSLNCFSRSRS*RVISAF
Trigger: AAATGCTGAAATGACGCGTCAGCTGCGAGAGCGTGA...AAAACAGTTTAAACTTCCAACCCATGCATGTGTTGTTCTATGCACATTTGGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR TCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAAATCCGTTTTTAAAATaGACATCTCTGTGTGCCACA +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRNPFLK*TSLCAT
Trigger: TGTGGCACACAGAGATGTTCATTTTAAAAACGGATT...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp GTAGTACAGAGGTTTACTAACTCTGTGAATGGGAAGATCACTTGGCTACCCAGTCAGCAAAAGCAATCATaGCTCACTCTATTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: VVQRFTNSVNGKITWLPSQQKQS*LTLFFS
Trigger: ACTGAAGAATAGAGTGAGTCATGATTGCTTTTGCTG...ACTGGGTAGCCAAGTGATCTTCCCATTCACAGAGTTAGTAAACCTCTGTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR GCA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCAGTTCAGCGAAGCTCTaGTCTGCAGCAGTTTGGACT +
Preference number: 4 (lower is better)
Translates to: LATQCSLINISTRVFHEISSAKL*SAAVWT
Trigger: AGTCCAAACTGCTGCAGAGCAGAGCTTCGCTGAACT...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAAGGCCCAGATCAACATaGATAAATTCCAGTAAATTC +
Preference number: 4 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRRPRST*INSSKF
Trigger: GAATTTACTGGAATTTATGCATGTTGATCTGGGCCT...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp GTAGTACAGAGGTTTACTAACTCTGTGAATGGGAAGATCACTTGGCTACCCAGTCACTTGGCTACCCAGTaGTCTCTTATAAACATAAGT +
Preference number: 4 (lower is better)
Translates to: VVQRFTNSVNGKITWLPSHLATQ*SLINIS
Trigger: ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG...ACTGGGTAGCCAAGTGATCTTCCCATTCACAGAGTTAGTAAACCTCTGTACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285848.9
ENST00000612549.6
CDS-3UTR CCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAATGCTCTGCAGCAGTTTaGACTACATCTGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHECSAAV*TTSAVS
Trigger: AGAGACTGCAGATGTAGTCCAAACTGCTGCAGAGCA...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTAAACTTCTGGATCTCTaGCAAGTGATTGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: LCEWEDHLATQCSLINISKLLDL*QVIVDP
Trigger: AGGATCCACAATCACTTGCCAGAGATCCAGAAGTTT...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAGGAAATGCATGGTTATaGGCAAGGTTATCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHEGNAWL*ARLSGA
Trigger: TGCCCCTGATAACCTTGCCCATAACCATGCATTTCC...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGATGTAGGAGAGGGTTGTaGGTAAAGGTCTGTCGTAAA +
Preference number: 4 (lower is better)
Translates to: EWEDHLATQCSLINISTRCRRGL*VKVCRK
Trigger: TTTACGACAGACCTTTACCCACAACCCTCTCCTACA...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGACTGGTCTCAAATTCCTaGACTCAAGTGATCTACCCA +
Preference number: 4 (lower is better)
Translates to: EWEDHLATQCSLINISTRLVSNS*TQVIYP
Trigger: TGGGTAGATCACTTGAGTCCAGGAATTTGAGACCAG...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR TCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAACTAACTTGGCCTCTCTaGTTCGACTGGAAAACTTCT +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHELTWPL*FDWKTS
Trigger: AGAAGTTTTCCAGTCGAATCAGAGAGGCCAAGTTAG...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAACATTTCTCATCCACTaGAGGTCAGAACTTTGCACA +
Preference number: 4 (lower is better)
Translates to: EWEDHLATQCSLINISTRTFLIH*RSELCT
Trigger: TGTGCAAAGTTCTGACCTTCAGTGGATGAGAAATGT...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCCAGCCAAGTGTGTCGTaGCAGGGATACTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: LATQCSLINISTRVFHEIQPSVS*QGYFDF
Trigger: AAAGTCAAAGTATCCCTGGCACGACACACTTGGCTG...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAGAATTCCTGCCAGAATaGGCACAGAACATAAGTCAG +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHEEFLPE*AQNISQ
Trigger: CTGACTTATGTTCTGTGCGCATTCTGGCAGGAATTC...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCTGCTCTGCAGCAGTTTaGACTACATCTGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LATQCSLINISTRVFHEICSAAV*TTSAVS
Trigger: AGAGACTGCAGATGTAGTCCAAACTGCTGCAGAGCA...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAAAACTTCTGGATCTCTaGCAAGTGATTGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: EWEDHLATQCSLINISTRKLLDL*QVIVDP
Trigger: AGGATCCACAATCACTTGCCAGAGATCCAGAAGTTT...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCCCGTGGGGAAATGCATaGTTATGGGCAAGGTTATCA +
Preference number: 4 (lower is better)
Translates to: LATQCSLINISTRVFHEIPWGNA*LWARLS
Trigger: TGATAACCTTGCCCATAACCATGCATTTCCCCACGG...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAATGTAGGAGAGGGTTGTaGGTAAAGGTCTGTCGTAAA +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHECRRGL*VKVCRK
Trigger: TTTACGACAGACCTTTACCCACAACCCTCTCCTACA...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAAATGGGAAGATCACTTaGCTACCCAGTGCTCTCTTA +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHENGKIT*LPSALL
Trigger: TAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATT...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAGGCCTCCCAAAATGCTaGGTATTCTTCAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHEGLPKC*VFFSFL
Trigger: CAGAAAACTGAAGAATACCCAGCATTTTGGGAGGCC...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR TCA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCGGTTTACTAACTCTGTaGATGGGAAGATCACTTGGC +
Preference number: 4 (lower is better)
Translates to: LATQCSLINISTRVFHEIGLLTL*MGRSLG
Trigger: GCCAAGTGATCTTCCCATTCACAGAGTTAGTAAACC...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285848.9
ENST00000612549.6
CDS-3UTR CCA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCAATTCCAGTAAATTCTaGATCAGTCCCACTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LATQCSLINISTRVFHEINSSKF*ISPTGV
Trigger: CACCCCAGTGGGACTGATCCAGAATTTACTGGAATT...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAATCATGTACAACACGCTaGGGGATTTTAAGTACAGTG +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHESCTTR*GILSTV
Trigger: CACTGTACTTAAAATCCCCCAGCGTGTTGTACATGA...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCTGTAGGAGAGGGTTGTaGGTAAAGGTCTGTCGTAAA +
Preference number: 4 (lower is better)
Translates to: LATQCSLINISTRVFHEICRRGL*VKVCRK
Trigger: TTTACGACAGACCTTTACCCACAACCCTCTCCTACA...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAAATCCGTTTTTAAAATaGACATCTCTGTGTGCCACA +
Preference number: 4 (lower is better)
Translates to: EWEDHLATQCSLINISTRNPFLK*TSLCAT
Trigger: TGTGGCACACAGAGATGTTCATTTTAAAAACGGATT...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAAGGCCCAGATCAACATaGATAAATTCCAGTAAATTC +
Preference number: 4 (lower is better)
Translates to: EWEDHLATQCSLINISTRRPRST*INSSKF
Trigger: GAATTTACTGGAATTTATGCATGTTGATCTGGGCCT...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAACACTTGGCTACCCAGTaGTCTCTTATAAACATAAGT +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHEHLATQ*SLINIS
Trigger: ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCAAACTTCTGGATCTCTaGCAAGTGATTGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: LATQCSLINISTRVFHEIKLLDL*QVIVDP
Trigger: AGGATCCACAATCACTTGCCAGAGATCCAGAAGTTT...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAAGGCCCAGATCAACATaGATAAATTCCAGTAAATTC +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHERPRST*INSSKF
Trigger: GAATTTACTGGAATTTATGCATGTTGATCTGGGCCT...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR GCA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCCACTTGGCTACCCAGTaGTCTCTTATAAACATAAGT +
Preference number: 4 (lower is better)
Translates to: LATQCSLINISTRVFHEIHLATQ*SLINIS
Trigger: ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CCA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAAGAACAACACATGCATaGGTTGGAAGTTTAAACTGT +
Preference number: 4 (lower is better)
Translates to: HLATQCSLINISTRVFHERTTHA*VGSLNC
Trigger: ACAGTTTAAACTTCCAACCCATGCATGTGTTGTTCT...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR GCA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCAGGCCCAGATCAACATaGATAAATTCCAGTAAATTC +
Preference number: 4 (lower is better)
Translates to: LATQCSLINISTRVFHEIRPRST*INSSKF
Trigger: GAATTTACTGGAATTTATGCATGTTGATCTGGGCCT...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR TCA 90 bp AATCCAAATGTGCATAGAACAACACATGCATGGGTTGGAAGTTTAAACTGTTTTAATCCGTTTTTAAAATaGACATCTCTGTGTGCCACA +
Preference number: 4 (lower is better)
Translates to: NPNVHRTTHAWVGSLNCFNPFLK*TSLCAT
Trigger: TGTGGCACACAGAGATGTTCATTTTAAAAACGGATT...AAAACAGTTTAAACTTCCAACCCATGCATGTGTTGTTCTATGCACATTTGGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS GCA 90 bp GTCCTGGGGCCTGGTTCACTGGGTCAGGGCAGCATCCCGGTGCTCTaGCCCGGGGCATCCTTACCCGACGCCCGGACTGTAGCAAGCGCA +
Preference number: 5 (lower is better)
Translates to: VLGPGSLGQGSIPVL*PGASLPDARTVASA
Trigger: TGCGCTTGCTACAGTCCGGGCGTCGGGTAAGGATGCCCCGGGGCAGAGCACCGGGATGCTGCCCTGACCCAGTGAACCAGGCCCCAGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358043.5
ENST00000431881.6
CDS GCA 90 bp GCTGCTGGGAATAGGAGCCGTGTGGTCAGCGGTTTCCCAAGCCATTaGGAGGGCCCTGCGACGCTGTGGACCCGACGCCCGGACTGTAGC +
Preference number: 5 (lower is better)
Translates to: AAGNRSRVVSGFPSH*EGPATLWTRRPDCS
Trigger: GCTACAGTCCGGGCGTCGGGTCCACAGCGTCGCAGGGCCCTCGCAATGGCTTGGGAAACCGCTGACCACACGGCTCCTATTCCCAGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000473744.5
ENST00000483939.6
ENST00000495424.5
ENST00000557299.5
ENST00000612549.6
CDS CCA 90 bp AGTGTGGGCGACAGCAGCACGGGGCTGCTGGGAATAGGAGCCGTGTaGTCAGCGGTTTCCCAAGCCATTGCGAGGGCCCTGCGACGCTGT +
Preference number: 5 (lower is better)
Translates to: SVGDSSTGLLGIGAV*SAVSQAIARALRRC
Trigger: ACAGCGTCGCAGGGCCCTCGCAATGGCTTGGGAAACCGCTGACCACACGGCTCCTATTCCCAGCAGCCCCGTGCTGCTGTCGCCCACACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000431881.6
ENST00000473744.5
ENST00000483939.6
ENST00000495424.5
ENST00000556473.1
ENST00000557299.5
ENST00000612549.6
CDS TCA 90 bp CGAGGCCGAGGTGCTCTCGCCAGGAGCCAAGCCAATTCCAGAAGCTaGCACCGGGCTGCTGGGCCCATAGTGTCGGGGACTAACCCTAGC +
Preference number: 5 (lower is better)
Translates to: RGRGALARSQANSRS*HRAAGPIVSGTNPS
Trigger: GCTAGGGTTAGTCCCCGACACTATGGGCCCAGCAGCCCGGTGTCAGCTTCTGGAATTGGCTTGGCTCCTGGCGAGAGCACCTCGGCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358043.5
CDS GCA 90 bp GCTGCTGGGAATAGGAGCCGTGTGGTCAGCGGTTTCCCAAGCCATTaGGAGGGCCCTGCGACGCTGTGGACCTGGGTTCCCCGCATCTCA +
Preference number: 5 (lower is better)
Translates to: AAGNRSRVVSGFPSH*EGPATLWTWVPRIS
Trigger: TGAGATGCGGGGAACCCAGGTCCACAGCGTCGCAGGGCCCTCGCAATGGCTTGGGAAACCGCTGACCACACGGCTCCTATTCCCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358043.5
ENST00000556473.1
CDS GCA 90 bp GCTGCTGGGAATAGGAGCCGTGTGGTCAGCGGTTTCCCAAGCCATTaGGAGGGCCCTGCGACGCTGTGGACCCTAGCGCGTCCTCACATG +
Preference number: 5 (lower is better)
Translates to: AAGNRSRVVSGFPSH*EGPATLWTLARPHM
Trigger: CATGTGAGGACGCGCTAGGGTCCACAGCGTCGCAGGGCCCTCGCAATGGCTTGGGAAACCGCTGACCACACGGCTCCTATTCCCAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431881.6
CDS TCA 90 bp GGGTTCCCCGCATCTCAGTTATCGCAGACCCACATCGGAGGGCCCTaGGAACGAGGCCGAGGTGCTCTCGCCAGGAGCCAAGCCAATTCC +
Preference number: 5 (lower is better)
Translates to: GFPASQLSQTHIGGP*ERGRGALARSQANS
Trigger: GGAATTGGCTTGGCTCCTGGCGAGAGCACCTCGGCCTCGTTCTCAGGGCCCTCCGATGTGGGTCTGCGATAACTGAGATGCGGGGAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358043.5
ENST00000556473.1
CDS GCA 90 bp GTTATCGCAGACCCACATCGGAGGGCCCTGAGAACGAGGCCGAGGTaGTCTCGCCAGGAGCCAAGCCAATTCCAGAAGCTGACACCGGGC +
Preference number: 5 (lower is better)
Translates to: VIADPHRRALRTRPR*SRQEPSQFQKLTPG
Trigger: GCCCGGTGTCAGCTTCTGGAATTGGCTTGGCTCCTGGCGAGAGCACCTCGGCCTCGTTCTCAGGGCCCTCCGATGTGGGTCTGCGATAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358043.5
ENST00000556473.1
CDS GCA 90 bp AGCGCAGAAGCTCCCGGCGTCCGCACATTAGTCCCATCGCCATTTTaGCCGGAAGAGGACTTGCTTTTGCGCCTGCGCAGTAAGAACCAC +
Preference number: 5 (lower is better)
Translates to: SAEAPGVRTLVPSPF*PEEDLLLRLRSKNH
Trigger: GTGGTTCTTACTGCGCAGGCGCAAAAGCAAGTCCTCTTCCGGGCAAAATGGCGATGGGACTAATGTGCGGACGCCGGGAGCTTCTGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285848.9
CDS TCA 90 bp GCAAGTGATTGTGGATCCTGGCTGCCTCTCGCTGGCCCGTCACGATaGGAGGAAAAATCAGGCAGCGGGCAAAGAATGCAGCAATGGCCC +
Preference number: 5 (lower is better)
Translates to: ASDCGSWLPLAGPSR*EEKSGSGQRMQQWP
Trigger: GGGCCATTGCTGCATTCTTTGCCCGCTGCCTGATTTTTCCTCTCATCGTGACGGGCCAGCGAGAGGCAGCCAGGATCCACAATCACTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495424.5
CDS CCA 90 bp GGACTACATCTGCAGTCTCTCCAGAAGCCACCTCAGGTACTGCTGTaGGTGAGGGAGTTGCAGCAACAACAGGAGGGGCCTGAACCTGGA +
Preference number: 5 (lower is better)
Translates to: GLHLQSLQKPPQVLL*VRELQQQQEGPEPG
Trigger: TCCAGGTTCAGGCCCCTCCTGTTGTTGCTGCAACTCCCTCACCCACAGCAGTACCTGAGGTGGCTTCTGGAGAGACTGCAGATGTAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000431881.6
ENST00000442110.6
ENST00000473744.5
ENST00000481218.1
ENST00000483939.6
ENST00000495424.5
ENST00000556473.1
ENST00000612549.6
CDS TCA 90 bp TACATCTGCAGTCTCTCCAGAAGCCACCTCAGGTACTGCTGTGGGTaGGGGAGTTGCAGCAACAACAGGAGGGGCCTGAACCTGGACTTC +
Preference number: 5 (lower is better)
Translates to: YICSLSRSHLRYCCG*GSCSNNRRGLNLDF
Trigger: GAAGTCCAGGTTCAGGCCCCTCCTGTTGTTGCTGCAACTCCCTCACCCACAGCAGTACCTGAGGTGGCTTCTGGAGAGACTGCAGATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000431881.6
ENST00000442110.6
ENST00000473744.5
ENST00000481218.1
ENST00000483939.6
ENST00000495424.5
ENST00000556473.1
ENST00000612549.6
CDS CCA 90 bp TATGACCCCAGCCCCAGTTCAGCGAAGCTCTGCTCTGCAGCAGTTTaGACTACATCTGCAGTCTCTCCAGAAGCCACCTCAGGTACTGCT +
Preference number: 5 (lower is better)
Translates to: YDPSPSSAKLCSAAV*TTSAVSPEATSGTA
Trigger: AGCAGTACCTGAGGTGGCTTCTGGAGAGACTGCAGATGTAGTCCAAACTGCTGCAGAGCAGAGCTTCGCTGAACTGGGGCTGGGGTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000431881.6
ENST00000442110.6
ENST00000473744.5
ENST00000481218.1
ENST00000483939.6
ENST00000495424.5
ENST00000556473.1
ENST00000612549.6
CDS-3UTR CAA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGACGGTTTCCCAAGCCATaGCGAGGGCCCTGCGACGCT +
Preference number: 5 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRRFPKP*RGPCDA
Trigger: AGCGTCGCAGGGCCCTCGCAATGGCTTGGGAAACCG...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp GCCTCCCAAGTAGCTGGGAATACAGGCACCCGCCGCCATGCCCGGCTAATTTTTCCGGAGACAGGATACTaGGACCAGGGAAAACAAATT +
Preference number: 5 (lower is better)
Translates to: ASQVAGNTGTRRHARLIFPETGY*DQGKQI
Trigger: AATTTGTTTTCCCTGGTCCAAGTATCCTGTCTCCGG...AAAAATTAGCCGGGCATGGCGGCGGGTGCCTGTATTCCCAGCTACTTGGGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS GCA 90 bp TCTGTCGTAAAGGACCCCTGGCTGCTAGCTCCAACTGATTCCGCATaGGTTGTTCACGCTCTCGCAGCTGACGCGTCATTTCAGCATTTT +
Preference number: 5 (lower is better)
Translates to: SVVKDPWLLAPTDSA*VVHALAADASFQHF
Trigger: AAAATGCTGAAATGACGCGTCAGCTGCGAGAGCGTGAACAACGCATGCGGAATCAGTTGGAGCTAGCAGCCAGGGGTCCTTTACGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000481218.1
ENST00000495424.5
ENST00000612549.6
CDS-3UTR CAA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGATGCCCGGAAGAGGACTaGCTTTTGCGCCTGCGCAGT +
Preference number: 5 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRCPEED*LLRLRS
Trigger: ACTGCGCAGGCGCAAAAGCAAGTCCTCTTCCGGGCA...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285848.9
CDS-3UTR CAA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTCGGTTTCCCAAGCCATaGCGAGGGCCCTGCGACGCT +
Preference number: 5 (lower is better)
Translates to: LCEWEDHLATQCSLINISRFPKP*RGPCDA
Trigger: AGCGTCGCAGGGCCCTCGCAATGGCTTGGGAAACCG...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS CCA 90 bp AAGCCTTCCCGTGGAGGTAATTTGTCCAGGTCATGTACAACACGCTaGGGGATTTTAAGTACAGTGCGTACTGCTGGAATCCGGAGACAG +
Preference number: 5 (lower is better)
Translates to: KPSRGGNLSRSCTTR*GILSTVRTAGIRRQ
Trigger: CTGTCTCCGGATTCCAGCAGTACGCACTGTACTTAAAATCCCCCAGCGTGTTGTACATGACCTGGACAAATTACCTCCACGGGAAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000481218.1
ENST00000495424.5
ENST00000612549.6
CDS-3UTR CAA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGACGGTTTCCCAAGCCATaGCGAGGGCCCTGCGACGCT +
Preference number: 5 (lower is better)
Translates to: EWEDHLATQCSLINISTRRFPKP*RGPCDA
Trigger: AGCGTCGCAGGGCCCTCGCAATGGCTTGGGAAACCG...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp ATAAATTCCAGTAAATTCTGGATCAGTCCCACTGGGGTGTATGACCCCAGCCCCCTGCTCTGCAGCAGTTaGGACTACATCTGCAGTCTC +
Preference number: 5 (lower is better)
Translates to: INSSKFWISPTGVYDPSPLLCSS*DYICSL
Trigger: GAGACTGCAGATGTAGTCCAAACTGCTGCAGAGCAG...GGGGCTGGGGTCATACACCCCAGTGGGACTGATCCAGAATTTACTGGAATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442110.6
CDS-3UTR CAA 90 bp CTCCCAGGTAGCTGGGACTATGGACAAGCACCACCATGCTCAGCTAACTTTTTATGGTCTCCTGCTAACTaGGCCTCTCTGATTCGACTG +
Preference number: 5 (lower is better)
Translates to: LPGSWDYGQAPPCSANFLWSPAN*ASLIRL
Trigger: CAGTCGAATCAGAGAGGCCAAGTTAGCAGGAGACCA...TAAAAAGTTAGCTGAGCATGGTGGTGCTTGTCCATAGTCCCAGCTACCTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR CAA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGACTGATTCCGCATGCGTaGTTCACGCTCTCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRLIPHA*FTLSQL
Trigger: CAGCTGCGAGAGCGTGAACAACGCATGCGGAATCAG...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000612549.6
CDS GCA 90 bp TTCCTGCCAGAATGCGCACAGAACATAAGTCAGCCAAGTGTGTCGTaGCAGGGATACTTTGACTTTGGTTTGCTGCTGCTGCTAGGGATA +
Preference number: 5 (lower is better)
Translates to: FLPECAQNISQPSVS*QGYFDFGLLLLLGI
Trigger: TATCCCTAGCAGCAGCAGCAAACCAAAGTCAAAGTATCCCTGGCACGACACACTTGGCTGACTTATGTTCTGTGCGCATTCTGGCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000481218.1
ENST00000495424.5
ENST00000612549.6
CDS-3UTR CAA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAACGGTTTCCCAAGCCATaGCGAGGGCCCTGCGACGCT +
Preference number: 5 (lower is better)
Translates to: HLATQCSLINISTRVFHERFPKP*RGPCDA
Trigger: AGCGTCGCAGGGCCCTCGCAATGGCTTGGGAAACCG...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp TGGTCTCCTGCTAACTTGGCCTCTCTGATTCGACTGGAAAACTTCTGGATCTCTTGGTCTCCTGCTAACTaGGCCTCTCTGATTCGACTG +
Preference number: 5 (lower is better)
Translates to: WSPANLASLIRLENFWISWSPAN*ASLIRL
Trigger: CAGTCGAATCAGAGAGGCCAAGTTAGCAGGAGACCA...AGAGATCCAGAAGTTTTCCAGTCGAATCAGAGAGGCCAAGTTAGCAGGAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442110.6
CDS-3UTR CAA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAGAAGAGGACTTGCTTTaGCGCCTGCGCAGTAAGAAC +
Preference number: 5 (lower is better)
Translates to: CFEDESLKRQNSCQNAHREEDLL*RLRSKN
Trigger: GTTCTTACTGCGCAGGCGCAAAAGCAAGTCCTCTTC...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285848.9
CDS-3UTR CAA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGACTGCTCTGCAGCAGTTaGGACTACATCTGCAGTCTC +
Preference number: 5 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRLLCSS*DYICSL
Trigger: GAGACTGCAGATGTAGTCCAAACTGCTGCAGAGCAG...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGATGGTCTCCTGCTAACTaGGCCTCTCTGATTCGACTG +
Preference number: 5 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRWSPAN*ASLIRL
Trigger: CAGTCGAATCAGAGAGGCCAAGTTAGCAGGAGACCA...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGACTGAAGGTCAGAACTTaGCACACCTGTCTCAGCACC +
Preference number: 5 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRLKVRT*HTCLST
Trigger: GGTGCTGAGACAGGTGTGCAAAGTTCTGACCTTCAG...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp CTCCCAGGTAGCTGGGACTATGGACAAGCACCACCATGCTCAGCTAACTTTTTATCCCGTGGAGGTAATTaGTCCAGGTCATGTACAACA +
Preference number: 5 (lower is better)
Translates to: LPGSWDYGQAPPCSANFLSRGGN*SRSCTT
Trigger: TGTTGTACATGACCTGGACAAATTACCTCCACGGGA...TAAAAAGTTAGCTGAGCATGGTGGTGCTTGTCCATAGTCCCAGCTACCTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR CAA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTCTGATTCCGCATGCGTaGTTCACGCTCTCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: LCEWEDHLATQCSLINISLIPHA*FTLSQL
Trigger: CAGCTGCGAGAGCGTGAACAACGCATGCGGAATCAG...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285848.9
ENST00000612549.6
CDS-3UTR CAA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAGGTTGTAGGAGAGGGTaGTGGGTAAAGGTCTGTCGT +
Preference number: 5 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRGCRRG*WVKVCR
Trigger: ACGACAGACCTTTACCCACAACCCTCTCCTACAACC...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGACGTGCCAGGGATACTTaGACTTTGGTTTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRRARDT*TLVCCC
Trigger: GCAGCAGCAAACCAAAGTCAAAGTATCCCTGGCACG...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS TCA 90 bp GGCAAGGTTATCAGGGGCATCATTCTGATGACATTTCTCATCCACTaGAGGTCAGAACTTTGCACACCTGTCTCAGCACCTAGCTCAAGA +
Preference number: 5 (lower is better)
Translates to: GKVIRGIILMTFLIH*RSELCTPVSAPSSR
Trigger: TCTTGAGCTAGGTGCTGAGACAGGTGTGCAAAGTTCTGACCTTCAGTGGATGAGAAATGTCATCAGAATGATGCCCCTGATAACCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000481218.1
ENST00000495424.5
ENST00000612549.6
CDS CCA 90 bp GCCAGAATTGTAGCCGCAGATCAGGCGGTAAAAGAGAACGGAGCTTaGCGGCCATATTTGAAGTGGGTAAAAATCTGTAAAGCCACGTTA +
Preference number: 5 (lower is better)
Translates to: ARIVAADQAVKENGA*RPYLKWVKICKATL
Trigger: TAACGTGGCTTTACAGATTTTTACCCACTTCAAATATGGCCGCCAAGCTCCGTTCTCTTTTACCGCCTGATCTGCGGCTACAATTCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285848.9
CDS-3UTR CAA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGACTGCTGCTAGGGATATaGGGAGGGTTATCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRLLLGI*GGLSFP
Trigger: TGGAAAGGATAACCCTCCCAATATCCCTAGCAGCAG...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAGAATGGGAAGATCACTaGGCTACCCAGTGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: CFEDESLKRQNSCQNAHREWEDH*ATQCSL
Trigger: AAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTCTGAAGGTCAGAACTTaGCACACCTGTCTCAGCACC +
Preference number: 5 (lower is better)
Translates to: LCEWEDHLATQCSLINISLKVRT*HTCLST
Trigger: GGTGCTGAGACAGGTGTGCAAAGTTCTGACCTTCAG...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGACCGGAGACAGGATACTaGGACCAGGGAAAACAAATT +
Preference number: 5 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRPETGY*DQGKQI
Trigger: AATTTGTTTTCCCTGGTCCAAGTATCCTGTCTCCGG...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGATCCCGTGGAGGTAATTaGTCCAGGTCATGTACAACA +
Preference number: 5 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRSRGGN*SRSCTT
Trigger: TGTTGTACATGACCTGGACAAATTACCTCCACGGGA...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTGGTTGTAGGAGAGGGTaGTGGGTAAAGGTCTGTCGT +
Preference number: 5 (lower is better)
Translates to: LCEWEDHLATQCSLINISGCRRG*WVKVCR
Trigger: ACGACAGACCTTTACCCACAACCCTCTCCTACAACC...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp AATCCAAATGTGCATAGAACAACACATGCATGGGTTGGAAGTTTAAACTGTTTTTGCGGTGGTGCGATCTaGGCTCACTGCAACCTCCGC +
Preference number: 5 (lower is better)
Translates to: NPNVHRTTHAWVGSLNCFCGGAI*AHCNLR
Trigger: GCGGAGGTTGCAGTGAGCCAAGATCGCACCACCGCA...AAAACAGTTTAAACTTCCAACCCATGCATGTGTTGTTCTATGCACATTTGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR CAA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAAGTCCCATCGCCATTTaGCCCGGAAGAGGACTTGCT +
Preference number: 5 (lower is better)
Translates to: HLATQCSLINISTRVFHESPIAI*PGRGLA
Trigger: AGCAAGTCCTCTTCCGGGCAAAATGGCGATGGGACT...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285848.9
CDS-3UTR CAA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGACTGCTCTGCAGCAGTTaGGACTACATCTGCAGTCTC +
Preference number: 5 (lower is better)
Translates to: EWEDHLATQCSLINISTRLLCSS*DYICSL
Trigger: GAGACTGCAGATGTAGTCCAAACTGCTGCAGAGCAG...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp CCCTGTTCAATAAGTATCAGGAAGCAGCATGTAGTACAGAGGTTTACTAACTCTCTGCTCTGCAGCAGTTaGGACTACATCTGCAGTCTC +
Preference number: 5 (lower is better)
Translates to: PCSISIRKQHVVQRFTNSLLCSS*DYICSL
Trigger: GAGACTGCAGATGTAGTCCAAACTGCTGCAGAGCAG...AGAGTTAGTAAACCTCTGTACTACATGCTGCTTCCTGATACTTATTGAACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR CAA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGAACCAGGGAAAACAAATaGGAGGAGAGCCAGTACATA +
Preference number: 5 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRTRENK*EESQYI
Trigger: TATGTACTGGCTCTCCTCCAATTTGTTTTCCCTGGT...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGGTTGTAGGAGAGGGTaGTGGGTAAAGGTCTGTCGT +
Preference number: 5 (lower is better)
Translates to: EWEDHLATQCSLINISTRGCRRG*WVKVCR
Trigger: ACGACAGACCTTTACCCACAACCCTCTCCTACAACC...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTCTGCTGCTAGGGATATaGGGAGGGTTATCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: LCEWEDHLATQCSLINISLLLGI*GGLSFP
Trigger: TGGAAAGGATAACCCTCCCAATATCCCTAGCAGCAG...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGATACTTTGACTTTGGTTaGCTGCTGCTGCTAGGGATA +
Preference number: 5 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRYFDFG*LLLLGI
Trigger: TATCCCTAGCAGCAGCAGCAAACCAAAGTCAAAGTA...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGACGTGCCAGGGATACTTaGACTTTGGTTTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: EWEDHLATQCSLINISTRRARDT*TLVCCC
Trigger: GCAGCAGCAAACCAAAGTCAAAGTATCCCTGGCACG...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTGAATGGGAAGATCACTaGGCTACCCAGTGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: LCEWEDHLATQCSLINISEWEDH*ATQCSL
Trigger: AAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS TCA 90 bp CCTGGGACACATGAAACACAGAGAGGAAATTTCATGGGTACTGGATaGAATAAGGAAGGAAATGTTTTTGCTCACCTGAGTCACAGGGAG +
Preference number: 5 (lower is better)
Translates to: PGTHETQRGNFMGTG*NKEGNVFAHLSHRE
Trigger: CTCCCTGTGACTCAGGTGAGCAAAAACATTTCCTTCCTTATTTCATCCAGTACCCATGAAATTTCCTCTCTGTGTTTCATGTGTCCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000473744.5
ENST00000481218.1
ENST00000495424.5
CDS CCA 90 bp ATTTTAAGTACAGTGCGTACTGCTGGAATCCGGAGACAGGATACTTaGACCAGGGAAAACAAATTGGAGGAGAGCCAGTACATAAACACT +
Preference number: 5 (lower is better)
Translates to: ILSTVRTAGIRRQDT*TRENKLEESQYINT
Trigger: AGTGTTTATGTACTGGCTCTCCTCCAATTTGTTTTCCCTGGTCCAAGTATCCTGTCTCCGGATTCCAGCAGTACGCACTGTACTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000481218.1
ENST00000495424.5
ENST00000612549.6
CDS-3UTR CAA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTAAAAGAGAACGGAGCTaGGCGGCCATATTTGAAGTG +
Preference number: 5 (lower is better)
Translates to: LCEWEDHLATQCSLINISKRERS*AAIFEV
Trigger: CACTTCAAATATGGCCGCCAAGCTCCGTTCTCTTTT...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285848.9
CDS-3UTR CAA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAACTGAAGGTCAGAACTTaGCACACCTGTCTCAGCACC +
Preference number: 5 (lower is better)
Translates to: HLATQCSLINISTRVFHELKVRT*HTCLST
Trigger: GGTGCTGAGACAGGTGTGCAAAGTTCTGACCTTCAG...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp CTCTGTGAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTCCGGAGACAGGATACTaGGACCAGGGAAAACAAATT +
Preference number: 5 (lower is better)
Translates to: LCEWEDHLATQCSLINISPETGY*DQGKQI
Trigger: AATTTGTTTTCCCTGGTCCAAGTATCCTGTCTCCGG...ACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp TGTTTTGAGGATGAGTCTCTGAAGAGACAGAATTCCTGCCAGAATGCGCACAGATTTTTCCAGCCTTTTTaGAAGCTCTCTAGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: CFEDESLKRQNSCQNAHRFFQPF*KLSRKP
Trigger: AGGCTTCCTAGAGAGCTTCAAAAAAGGCTGGAAAAA...TCTGTGCGCATTCTGGCAGGAATTCTGTCTCTTCAGAGACTCATCCTCAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000612549.6
CDS-3UTR CAA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGACTGCTGCTAGGGATATaGGGAGGGTTATCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: EWEDHLATQCSLINISTRLLLGI*GGLSFP
Trigger: TGGAAAGGATAACCCTCCCAATATCCCTAGCAGCAG...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp CCCTGTTCAATAAGTATCAGGAAGCAGCATGTAGTACAGAGGTTTACTAACTCTCTGCTGCTAGGGATATaGGGAGGGTTATCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: PCSISIRKQHVVQRFTNSLLLGI*GGLSFP
Trigger: TGGAAAGGATAACCCTCCCAATATCCCTAGCAGCAG...AGAGTTAGTAAACCTCTGTACTACATGCTGCTTCCTGATACTTATTGAACAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR CAA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCTGGTCTCCTGCTAACTaGGCCTCTCTGATTCGACTG +
Preference number: 5 (lower is better)
Translates to: LATQCSLINISTRVFHEIWSPAN*ASLIRL
Trigger: CAGTCGAATCAGAGAGGCCAAGTTAGCAGGAGACCA...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCCTGAAGGTCAGAACTTaGCACACCTGTCTCAGCACC +
Preference number: 5 (lower is better)
Translates to: LATQCSLINISTRVFHEILKVRT*HTCLST
Trigger: GGTGCTGAGACAGGTGTGCAAAGTTCTGACCTTCAG...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGACCGGAGACAGGATACTaGGACCAGGGAAAACAAATT +
Preference number: 5 (lower is better)
Translates to: EWEDHLATQCSLINISTRPETGY*DQGKQI
Trigger: AATTTGTTTTCCCTGGTCCAAGTATCCTGTCTCCGG...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp GTAGTACAGAGGTTTACTAACTCTGTGAATGGGAAGATCACTTGGCTACCCAGTTTTTTCCAGCCTTTTTaGAAGCTCTCTAGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: VVQRFTNSVNGKITWLPSFFQPF*KLSRKP
Trigger: AGGCTTCCTAGAGAGCTTCAAAAAAGGCTGGAAAAA...ACTGGGTAGCCAAGTGATCTTCCCATTCACAGAGTTAGTAAACCTCTGTACTAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000285848.9
ENST00000612549.6
CDS-3UTR CAA 90 bp GAATGGGAAGATCACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGCTTGGCGGCCATATTaGAAGTGGGTAAAAATCTGT +
Preference number: 5 (lower is better)
Translates to: EWEDHLATQCSLINISTRAWRPY*KWVKIC
Trigger: ACAGATTTTTACCCACTTCAAATATGGCCGCCAAGC...TCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285848.9
CDS-3UTR CAA 90 bp AATCCAAATGTGCATAGAACAACACATGCATGGGTTGGAAGTTTAAACTGTTTTGGTTGTAGGAGAGGGTaGTGGGTAAAGGTCTGTCGT +
Preference number: 5 (lower is better)
Translates to: NPNVHRTTHAWVGSLNCFGCRRG*WVKVCR
Trigger: ACGACAGACCTTTACCCACAACCCTCTCCTACAACC...AAAACAGTTTAAACTTCCAACCCATGCATGTGTTGTTCTATGCACATTTGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS-3UTR CAA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCGAATGGGAAGATCACTaGGCTACCCAGTGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: LATQCSLINISTRVFHEIEWEDH*ATQCSL
Trigger: AAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTC...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAATATAGCAGCATGATCTaGGATCACTGCAGCCTCAAC +
Preference number: 5 (lower is better)
Translates to: HLATQCSLINISTRVFHEYSSMI*DHCSLN
Trigger: GTTGAGGCTGCAGTGATCCAAGATCATGCTGCTATA...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS GCA 90 bp TTAAGAAATATAGGCAGAGTGCATCTAGGTATCATGAACCTCTATTaGTCATTTGAAATCATCTGCTCTTCTGACCCCAGAGCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: LRNIGRVHLGIMNLY*SFEIICSSDPRASA
Trigger: TGCAGAAGCTCTGGGGTCAGAAGAGCAGATGATTTCAAATGAGCAATAGAGGTTCATGATACCTAGATGCACTCTGCCTATATTTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483939.6
CDS-3UTR CAA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCTCCCGTGGAGGTAATTaGTCCAGGTCATGTACAACA +
Preference number: 5 (lower is better)
Translates to: LATQCSLINISTRVFHEISRGGN*SRSCTT
Trigger: TGTTGTACATGACCTGGACAAATTACCTCCACGGGA...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp CACTTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAATACTTTGACTTTGGTTaGCTGCTGCTGCTAGGGATA +
Preference number: 5 (lower is better)
Translates to: HLATQCSLINISTRVFHEYFDFG*LLLLGI
Trigger: TATCCCTAGCAGCAGCAGCAAACCAAAGTCAAAGTA...TTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCACCAGGGAAAACAAATaGGAGGAGAGCCAGTACATA +
Preference number: 5 (lower is better)
Translates to: LATQCSLINISTRVFHEITRENK*EESQYI
Trigger: TATGTACTGGCTCTCCTCCAATTTGTTTTCCCTGGT...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000612549.6
CDS-3UTR CAA 90 bp TTGGCTACCCAGTGCTCTCTTATAAACATAAGTACAAGAGTGTTTCATGAAATCCGTAAAGGACCTTTTTaGAAGCTCTCTAGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: LATQCSLINISTRVFHEIRKGPF*KLSRKP
Trigger: AGGCTTCCTAGAGAGCTTCAAAAAAGGTCCTTTACG...GATTTCATGAAACACTCTTGTACTTATGTTTATAAGAGAGCACTGGGTAGCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412791.5
CDS-3UTR CAA 90 bp AATCCAAATGTGCATAGAACAACACATGCATGGGTTGGAAGTTTAAACTGTTTTTACTTTGACTTTGGTTaGCTGCTGCTGCTAGGGATA +
Preference number: 5 (lower is better)
Translates to: NPNVHRTTHAWVGSLNCFYFDFG*LLLLGI
Trigger: TATCCCTAGCAGCAGCAGCAAACCAAAGTCAAAGTA...AAAACAGTTTAAACTTCCAACCCATGCATGTGTTGTTCTATGCACATTTGGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612549.6
CDS TCA 90 bp TATAACATCTCTCCTGTTGTACTTTCAATCATTTCCCCACTGAATTaGAAATCCATCCTAAGCAGAGATGCTATCATTTTGGAGAGCTGT +
Preference number: 5 (lower is better)
Translates to: YNISPVVLSIISPLN*KSILSRDAIILESC
Trigger: ACAGCTCTCCAAAATGATAGCATCTCTGCTTAGGATGGATTTTCAATTCAGTGGGGAAATGATTGAAAGTACAACAGGAGAGATGTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557299.5
CDS CCA 72 bp GCTGCGGGGGCCGGAAGCCGCAAGGAAGAGGTAGTGTaGGCGACAGCAGCACGGGGCCGACGCCCGGACTGT +
Preference number: 6 (lower is better)
Translates to: AAGAGSRKEEVV*ATAARGRRPDC
Trigger: ACAGTCCGGGCGTCGGCCCCGTGCTGCTGTCGCCCACACTACCTCTTCCTTGCGGCTTCCGGCCCCCGCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442110.6
CDS GCA 72 bp CCTGGTTCACTGGGTCAGGGCAGCATCCCGGTGCTCTaGCCCGGGGCATCCTTACCCGACGCCCGGACTGTA +
Preference number: 6 (lower is better)
Translates to: PGSLGQGSIPVL*PGASLPDARTV
Trigger: TACAGTCCGGGCGTCGGGTAAGGATGCCCCGGGGCAGAGCACCGGGATGCTGCCCTGACCCAGTGAACCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358043.5
ENST00000431881.6
CDS GCA 72 bp AATAGGAGCCGTGTGGTCAGCGGTTTCCCAAGCCATTaGGAGGGCCCTGCGACGCTGTGGACCCGACGCCCG +
Preference number: 6 (lower is better)
Translates to: NRSRVVSGFPSH*EGPATLWTRRP
Trigger: CGGGCGTCGGGTCCACAGCGTCGCAGGGCCCTCGCAATGGCTTGGGAAACCGCTGACCACACGGCTCCTATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285848.9
ENST00000412791.5
ENST00000473744.5
ENST00000483939.6
ENST00000495424.5
ENST00000557299.5
ENST00000612549.6
CDS CCA 72 bp GACAGCAGCACGGGGCTGCTGGGAATAGGAGCCGTGTaGTCAGCGGTTTCCCAAGCCATTGCGAGGGCCCTG +
Preference number: 6 (lower is better)
Translates to: DSSTGLLGIGAV*SAVSQAIARAL
Trigger: CAGGGCCCTCGCAATGGCTTGGGAAACCGCTGACCACACGGCTCCTATTCCCAGCAGCCCCGTGCTGCTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000431881.6
ENST00000473744.5
ENST00000483939.6
ENST00000495424.5
ENST00000556473.1
ENST00000557299.5
ENST00000612549.6
CDS TCA 72 bp GGTGCTCTCGCCAGGAGCCAAGCCAATTCCAGAAGCTaGCACCGGGCTGCTGGGCCCATAGTGTCGGGGACT +
Preference number: 6 (lower is better)
Translates to: GALARSQANSRS*HRAAGPIVSGT
Trigger: AGTCCCCGACACTATGGGCCCAGCAGCCCGGTGTCAGCTTCTGGAATTGGCTTGGCTCCTGGCGAGAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358043.5
CDS GCA 72 bp GACCCACATCGGAGGGCCCTGAGAACGAGGCCGAGGTaGTCTCGCCAGGAGCCAAGCCAATTCCAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: DPHRRALRTRPR*SRQEPSQFQKL
Trigger: CAGCTTCTGGAATTGGCTTGGCTCCTGGCGAGAGCACCTCGGCCTCGTTCTCAGGGCCCTCCGATGTGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358043.5
ENST00000556473.1
CDS GCA 72 bp AATAGGAGCCGTGTGGTCAGCGGTTTCCCAAGCCATTaGGAGGGCCCTGCGACGCTGTGGACCTGGGTTCCC +
Preference number: 6 (lower is better)
Translates to: NRSRVVSGFPSH*EGPATLWTWVP
Trigger: GGGAACCCAGGTCCACAGCGTCGCAGGGCCCTCGCAATGGCTTGGGAAACCGCTGACCACACGGCTCCTATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358043.5
ENST00000556473.1
CDS GCA 72 bp TGTGGTCAGCGGTTTCCCAAGCCATTGCGAGGGCCCTaGGACGCTGTGGACCCTAGCGCGTCCTCACATGAC +
Preference number: 6 (lower is better)
Translates to: CGQRFPKPLRGP*DAVDPSASSHD
Trigger: GTCATGTGAGGACGCGCTAGGGTCCACAGCGTCGCAGGGCCCTCGCAATGGCTTGGGAAACCGCTGACCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431881.6
CDS GCA 72 bp AATAGGAGCCGTGTGGTCAGCGGTTTCCCAAGCCATTaGGAGGGCCCTGCGACGCTGTGGACCCTAGCGCGT +
Preference number: 6 (lower is better)
Translates to: NRSRVVSGFPSH*EGPATLWTLAR
Trigger: ACGCGCTAGGGTCCACAGCGTCGCAGGGCCCTCGCAATGGCTTGGGAAACCGCTGACCACACGGCTCCTATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431881.6
CDS CCA 72 bp TCTGCTGATACCCCTAGCACGAGCTGTCCTGGGGCCTaGTTCACTGGGTCAGGGCAGCATCCCGGTGCTCTG +
Preference number: 6 (lower is better)
Translates to: SADTPSTSCPGA*FTGSGQHPGAL
Trigger: CAGAGCACCGGGATGCTGCCCTGACCCAGTGAACCAGGCCCCAGGACAGCTCGTGCTAGGGGTATCAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358043.5
ENST00000431881.6
CDS TCA 72 bp GCATCTCAGTTATCGCAGACCCACATCGGAGGGCCCTaGGAACGAGGCCGAGGTGCTCTCGCCAGGAGCCAA +
Preference number: 6 (lower is better)
Translates to: ASQLSQTHIGGP*ERGRGALARSQ
Trigger: TTGGCTCCTGGCGAGAGCACCTCGGCCTCGTTCTCAGGGCCCTCCGATGTGGGTCTGCGATAACTGAGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358043.5
ENST00000556473.1
CDS TCA 72 bp GTGGACCCTAGCGCGTCCTCACATGACCCGAGGTCATaGCATTCAGGTCCCGGTGAGCAGGTCAGCGTCTGC +
Preference number: 6 (lower is better)
Translates to: VDPSASSHDPRS*HSGPGEQVSVC
Trigger: GCAGACGCTGACCTGCTCACCGGGACCTGAATGTCATGACCTCGGGTCATGTGAGGACGCGCTAGGGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431881.6
CDS GCA 72 bp GCTCCCGGCGTCCGCACATTAGTCCCATCGCCATTTTaGCCGGAAGAGGACTTGCTTTTGCGCCTGCGCAGT +
Preference number: 6 (lower is better)
Translates to: APGVRTLVPSPF*PEEDLLLRLRS
Trigger: ACTGCGCAGGCGCAAAAGCAAGTCCTCTTCCGGGCAAAATGGCGATGGGACTAATGTGCGGACGCCGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285848.9
CDS CAA 72 bp AGCTCCCGGCGTCCGCACATTAGTCCCATCGCCATTTaGCCCGGAAGAGGACTTGCTTTTGCGCCTGCGCAG +
Preference number: 6 (lower is better)
Translates to: SSRRPHISPIAI*PGRGLAFAPAQ
Trigger: CTGCGCAGGCGCAAAAGCAAGTCCTCTTCCGGGCAAAATGGCGATGGGACTAATGTGCGGACGCCGGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285848.9
CDS TCA 72 bp ACTAACCCTAGCGCGTCCTCACATGACCCGAGGTCATaGCATTCAGGTCCCGGTGAGCAGGTCAGCGTCTGC +
Preference number: 6 (lower is better)
Translates to: TNPSASSHDPRS*HSGPGEQVSVC
Trigger: GCAGACGCTGACCTGCTCACCGGGACCTGAATGTCATGACCTCGGGTCATGTGAGGACGCGCTAGGGTTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358043.5
CDS CCA 72 bp CTGCAGTCTCTCCAGAAGCCACCTCAGGTACTGCTGTaGGTGAGGGAGTTGCAGCAACAACAGGAGGGGCCT +
Preference number: 6 (lower is better)
Translates to: LQSLQKPPQVLL*VRELQQQQEGP
Trigger: AGGCCCCTCCTGTTGTTGCTGCAACTCCCTCACCCACAGCAGTACCTGAGGTGGCTTCTGGAGAGACTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000431881.6
ENST00000442110.6
ENST00000473744.5
ENST00000481218.1
ENST00000483939.6
ENST00000495424.5
ENST00000556473.1
ENST00000612549.6
CDS TCA 72 bp AGTCTCTCCAGAAGCCACCTCAGGTACTGCTGTGGGTaGGGGAGTTGCAGCAACAACAGGAGGGGCCTGAAC +
Preference number: 6 (lower is better)
Translates to: SLSRSHLRYCCG*GSCSNNRRGLN
Trigger: GTTCAGGCCCCTCCTGTTGTTGCTGCAACTCCCTCACCCACAGCAGTACCTGAGGTGGCTTCTGGAGAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000431881.6
ENST00000442110.6
ENST00000473744.5
ENST00000481218.1
ENST00000483939.6
ENST00000495424.5
ENST00000556473.1
ENST00000612549.6
CDS TCA 72 bp TGTGGATCCTGGCTGCCTCTCGCTGGCCCGTCACGATaGGAGGAAAAATCAGGCAGCGGGCAAAGAATGCAG +
Preference number: 6 (lower is better)
Translates to: CGSWLPLAGPSR*EEKSGSGQRMQ
Trigger: CTGCATTCTTTGCCCGCTGCCTGATTTTTCCTCTCATCGTGACGGGCCAGCGAGAGGCAGCCAGGATCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495424.5
CDS GCA 72 bp AAGGACCCCTGGCTGCTAGCTCCAACTGATTCCGCATaGGTTGTTCACGCTCTCGCAGCTGACGCGTCATTT +
Preference number: 6 (lower is better)
Translates to: KDPWLLAPTDSA*VVHALAADASF
Trigger: AAATGACGCGTCAGCTGCGAGAGCGTGAACAACGCATGCGGAATCAGTTGGAGCTAGCAGCCAGGGGTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000481218.1
ENST00000495424.5
ENST00000612549.6
CDS CAA 72 bp GTCCCATCGCCATTTTGCCCGGAAGAGGACTTGCTTTaGCGCCTGCGCAGTAAGAACCACAACCCCTCGAGA +
Preference number: 6 (lower is better)
Translates to: VPSPFCPEEDLL*RLRSKNHNPSR
Trigger: TCTCGAGGGGTTGTGGTTCTTACTGCGCAGGCGCAAAAGCAAGTCCTCTTCCGGGCAAAATGGCGATGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285848.9
CDS CAA 90 bp CGCACATTAGTCCCATCGCCATTTTGCCCGGAAGAGGACTTGCTTTaGCGCCTGCGCAGTAAGAACCACAACCCCTCGAGAGGAAGCACT +
Preference number: 6 (lower is better)
Translates to: RTLVPSPFCPEEDLL*RLRSKNHNPSRGST
Trigger: AGTGCTTCCTCTCGAGGGGTTGTGGTTCTTACTGCGCAGGCGCAAAAGCAAGTCCTCTTCCGGGCAAAATGGCGATGGGACTAATGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285848.9
CDS CCA 72 bp AGCCCCAGTTCAGCGAAGCTCTGCTCTGCAGCAGTTTaGACTACATCTGCAGTCTCTCCAGAAGCCACCTCA +
Preference number: 6 (lower is better)
Translates to: SPSSAKLCSAAV*TTSAVSPEATS
Trigger: TGAGGTGGCTTCTGGAGAGACTGCAGATGTAGTCCAAACTGCTGCAGAGCAGAGCTTCGCTGAACTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000431881.6
ENST00000442110.6
ENST00000473744.5
ENST00000481218.1
ENST00000483939.6
ENST00000495424.5
ENST00000556473.1
ENST00000612549.6
CDS TCA 72 bp CTGCCAGTGGTAATATGTAGATGGGATCGGATACCGTaGGATCCTGGAACCACCAGAGGCCACCTGTCTGCA +
Preference number: 6 (lower is better)
Translates to: LPVVICRWDRIP*DPGTTRGHLSA
Trigger: TGCAGACAGGTGGCCTCTGGTGGTTCCAGGATCTCACGGTATCCGATCCCATCTACATATTACCACTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000481218.1
ENST00000495424.5
ENST00000612549.6
CDS TCA 72 bp GAAGAAACCTTCCCCCAGGTAACACATGGGTGTGCCTaGGCATGTTTACATGTTCGGGGTAGGGCAGTGAGG +
Preference number: 6 (lower is better)
Translates to: EETFPQVTHGCA*ACLHVRGRAVR
Trigger: CCTCACTGCCCTACCCCGAACATGTAAACATGCTCAGGCACACCCATGTGTTACCTGGGGGAAGGTTTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483939.6
CDS CAA 72 bp ACATTAGTCCCATCGCCATTTTGCCCGGAAGAGGACTaGCTTTTGCGCCTGCGCAGTAAGAACCACAACCCC +
Preference number: 6 (lower is better)
Translates to: TLVPSPFCPEED*LLRLRSKNHNP
Trigger: GGGGTTGTGGTTCTTACTGCGCAGGCGCAAAAGCAAGTCCTCTTCCGGGCAAAATGGCGATGGGACTAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285848.9
CDS CAA 90 bp CTAGGGATATTGGGAGGGTTATCCTTTCCAGGTTGTAGGAGAGGGTaGTGGGTAAAGGTCTGTCGTAAAGGACCCCTGGCTGCTAGCTCC +
Preference number: 6 (lower is better)
Translates to: LGILGGLSFPGCRRG*WVKVCRKGPLAASS
Trigger: GGAGCTAGCAGCCAGGGGTCCTTTACGACAGACCTTTACCCACAACCCTCTCCTACAACCTGGAAAGGATAACCCTCCCAATATCCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000481218.1
ENST00000495424.5
ENST00000612549.6
CDS CCA 72 bp CAGAGATGCTATCATTTTGGAGAGCTGTGTGGAGCGTaGACAAGAACTCTGCTCCATATTCCCCCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: QRCYHFGELCGA*TRTLLHIPPAP
Trigger: GGGAGCAGGGGGAATATGGAGCAGAGTTCTTGTCCACGCTCCACACAGCTCTCCAAAATGATAGCATCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557299.5
CDS CAA 72 bp TTGGGAGGGTTATCCTTTCCAGGTTGTAGGAGAGGGTaGTGGGTAAAGGTCTGTCGTAAAGGACCCCTGGCT +
Preference number: 6 (lower is better)
Translates to: LGGLSFPGCRRG*WVKVCRKGPLA
Trigger: AGCCAGGGGTCCTTTACGACAGACCTTTACCCACAACCCTCTCCTACAACCTGGAAAGGATAACCCTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000481218.1
ENST00000495424.5
ENST00000612549.6
CDS CAA 72 bp CCAAGTGTGTCGTGCCAGGGATACTTTGACTTTGGTTaGCTGCTGCTGCTAGGGATATTGGGAGGGTTATCC +
Preference number: 6 (lower is better)
Translates to: PSVSCQGYFDFG*LLLLGILGGLS
Trigger: GGATAACCCTCCCAATATCCCTAGCAGCAGCAGCAAACCAAAGTCAAAGTATCCCTGGCACGACACACTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000481218.1
ENST00000495424.5
ENST00000612549.6
CDS CAA 90 bp ACTGCTGGAATCCGGAGACAGGATACTTGGACCAGGGAAAACAAATaGGAGGAGAGCCAGTACATAAACACTGCCGTGGGGAAATGCATG +
Preference number: 6 (lower is better)
Translates to: TAGIRRQDTWTRENK*EESQYINTAVGKCM
Trigger: CATGCATTTCCCCACGGCAGTGTTTATGTACTGGCTCTCCTCCAATTTGTTTTCCCTGGTCCAAGTATCCTGTCTCCGGATTCCAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000481218.1
ENST00000495424.5
ENST00000612549.6
CDS GCA 72 bp GAATGCGCACAGAACATAAGTCAGCCAAGTGTGTCGTaGCAGGGATACTTTGACTTTGGTTTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: ECAQNISQPSVS*QGYFDFGLLLL
Trigger: CAGCAGCAGCAAACCAAAGTCAAAGTATCCCTGGCACGACACACTTGGCTGACTTATGTTCTGTGCGCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000481218.1
ENST00000495424.5
ENST00000612549.6
CDS CAA 72 bp TACAGTGCGTACTGCTGGAATCCGGAGACAGGATACTaGGACCAGGGAAAACAAATTGGAGGAGAGCCAGTA +
Preference number: 6 (lower is better)
Translates to: YSAYCWNPETGY*DQGKQIGGEPV
Trigger: TACTGGCTCTCCTCCAATTTGTTTTCCCTGGTCCAAGTATCCTGTCTCCGGATTCCAGCAGTACGCACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000481218.1
ENST00000495424.5
ENST00000612549.6
CDS CAA 90 bp ATAAGTCAGCCAAGTGTGTCGTGCCAGGGATACTTTGACTTTGGTTaGCTGCTGCTGCTAGGGATATTGGGAGGGTTATCCTTTCCAGGT +
Preference number: 6 (lower is better)
Translates to: ISQPSVSCQGYFDFG*LLLLGILGGLSFPG
Trigger: ACCTGGAAAGGATAACCCTCCCAATATCCCTAGCAGCAGCAGCAAACCAAAGTCAAAGTATCCCTGGCACGACACACTTGGCTGACTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000481218.1
ENST00000495424.5
ENST00000612549.6
CDS CCA 72 bp CGTGGAGGTAATTTGTCCAGGTCATGTACAACACGCTaGGGGATTTTAAGTACAGTGCGTACTGCTGGAATC +
Preference number: 6 (lower is better)
Translates to: RGGNLSRSCTTR*GILSTVRTAGI
Trigger: GATTCCAGCAGTACGCACTGTACTTAAAATCCCCCAGCGTGTTGTACATGACCTGGACAAATTACCTCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000481218.1
ENST00000495424.5
ENST00000612549.6
CDS CAA 72 bp TTGAAGCTCTCTAGGAAGCCTTCCCGTGGAGGTAATTaGTCCAGGTCATGTACAACACGCTGGGGGATTTTA +
Preference number: 6 (lower is better)
Translates to: LKLSRKPSRGGN*SRSCTTRWGIL
Trigger: TAAAATCCCCCAGCGTGTTGTACATGACCTGGACAAATTACCTCCACGGGAAGGCTTCCTAGAGAGCTTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000481218.1
ENST00000495424.5
ENST00000612549.6
CDS TCA 72 bp ATCAGGGGCATCATTCTGATGACATTTCTCATCCACTaGAGGTCAGAACTTTGCACACCTGTCTCAGCACCT +
Preference number: 6 (lower is better)
Translates to: IRGIILMTFLIH*RSELCTPVSAP
Trigger: AGGTGCTGAGACAGGTGTGCAAAGTTCTGACCTTCAGTGGATGAGAAATGTCATCAGAATGATGCCCCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000481218.1
ENST00000495424.5
ENST00000612549.6
CDS CCA 72 bp GTAGCCGCAGATCAGGCGGTAAAAGAGAACGGAGCTTaGCGGCCATATTTGAAGTGGGTAAAAATCTGTAAA +
Preference number: 6 (lower is better)
Translates to: VAADQAVKENGA*RPYLKWVKICK
Trigger: TTTACAGATTTTTACCCACTTCAAATATGGCCGCCAAGCTCCGTTCTCTTTTACCGCCTGATCTGCGGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285848.9
CDS CAA 72 bp CAGGCGGTAAAAGAGAACGGAGCTTGGCGGCCATATTaGAAGTGGGTAAAAATCTGTAAAGCCACGTTACCA +
Preference number: 6 (lower is better)
Translates to: QAVKENGAWRPY*KWVKICKATLP
Trigger: TGGTAACGTGGCTTTACAGATTTTTACCCACTTCAAATATGGCCGCCAAGCTCCGTTCTCTTTTACCGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285848.9
CDS CAA 90 bp GATTTTAAGTACAGTGCGTACTGCTGGAATCCGGAGACAGGATACTaGGACCAGGGAAAACAAATTGGAGGAGAGCCAGTACATAAACAC +
Preference number: 6 (lower is better)
Translates to: DFKYSAYCWNPETGY*DQGKQIGGEPVHKH
Trigger: GTGTTTATGTACTGGCTCTCCTCCAATTTGTTTTCCCTGGTCCAAGTATCCTGTCTCCGGATTCCAGCAGTACGCACTGTACTTAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000285848.9
ENST00000358043.5
ENST00000412791.5
ENST00000481218.1
ENST00000495424.5
ENST00000612549.6
CDS CAA 72 bp AAATATGAAACCAACCAGGAAACACCACTCCTAATATaGCAGGAACGAAAGGCCTCTTACCTGGACTTCTGC +
Preference number: 6 (lower is better)
Translates to: KYETNQETPLLI*QERKASYLDFC
Trigger: GCAGAAGTCCAGGTAAGAGGCCTTTCGTTCCTGCAATATTAGGAGTGGTGTTTCCTGGTTGGTTTCATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557299.5
CDS GCA 72 bp ATAGGCAGAGTGCATCTAGGTATCATGAACCTCTATTaGTCATTTGAAATCATCTGCTCTTCTGACCCCAGA +
Preference number: 6 (lower is better)
Translates to: IGRVHLGIMNLY*SFEIICSSDPR
Trigger: TCTGGGGTCAGAAGAGCAGATGATTTCAAATGAGCAATAGAGGTTCATGATACCTAGATGCACTCTGCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483939.6
CDS TCA 72 bp AGGGAAATGCTGAAGACACAGGGGAGAAAAGATAATTaGTGGAGCAACGTGGCAGAAAGACACATAATTCAA +
Preference number: 6 (lower is better)
Translates to: REMLKTQGRKDN*WSNVAERHIIQ
Trigger: TTGAATTATGTGTCTTTCTGCCACGTTGCTCCATCAATTATCTTTTCTCCCCTGTGTCTTCAGCATTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483939.6
CDS TCA 72 bp CATGAAACACAGAGAGGAAATTTCATGGGTACTGGATaGAATAAGGAAGGAAATGTTTTTGCTCACCTGAGT +
Preference number: 6 (lower is better)
Translates to: HETQRGNFMGTG*NKEGNVFAHLS
Trigger: ACTCAGGTGAGCAAAAACATTTCCTTCCTTATTTCATCCAGTACCCATGAAATTTCCTCTCTGTGTTTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000473744.5
ENST00000481218.1
ENST00000495424.5
CDS TCA 72 bp ATGCTTAAGGGGATGGATATCTCATTCTCCATAATGTaGTTATTACACCTTGCATGCCTCTATCAAAACATC +
Preference number: 6 (lower is better)
Translates to: MLKGMDISFSIM*LLHLACLYQNI
Trigger: GATGTTTTGATAGAGGCATGCAAGGTGTAATAATCACATTATGGAGAATGAGATATCCATCCCCTTAAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483939.6