Pregenerated sensors for OVOL3 (Homo sapiens)
Ensembl gene IDs: ENSG00000105261Ensembl transcript IDs: ENST00000585332.3, ENST00000633214.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGCTGGCACACCGTATCAGGCTGCGCGGTGCAGGGCGCGGTGCTGTaGGTAGGTGTCGGGCCGGGAGCTGGTGAAGCCGCAGTCCTCGCA | + |
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Preference number: 5 (lower is better) Translates to: RWHTVSGCAVQGAVL*VGVGPGAGEAAVLA Trigger: TGCGAGGACTGCGGCTTCACCAGCTCCCGGCCCGACACCTACGCACAGCACCGCGCCCTGCACCGCGCAGCCTGATACGGTGTGCCAGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585332.3 ENST00000633214.1 |
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| CDS GCA 72 bp | ACCGTATCAGGCTGCGCGGTGCAGGGCGCGGTGCTGTaGGTAGGTGTCGGGCCGGGAGCTGGTGAAGCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: TVSGCAVQGAVL*VGVGPGAGEAA Trigger: TGCGGCTTCACCAGCTCCCGGCCCGACACCTACGCACAGCACCGCGCCCTGCACCGCGCAGCCTGATACGGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585332.3 ENST00000633214.1 |
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| CDS GCA 72 bp | GCCTCGTGGGGAGGACGCTGGCACACCGTATCAGGCTaGGCGGTGCAGGGCGCGGTGCTGTGCGTAGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ASWGGRWHTVSG*AVQGAVLCVGV Trigger: GACACCTACGCACAGCACCGCGCCCTGCACCGCGCAGCCTGATACGGTGTGCCAGCGTCCTCCCCACGAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585332.3 ENST00000633214.1 |
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| CDS TCA 72 bp | CGCGGTGCTGTGCGTAGGTGTCGGGCCGGGAGCTGGTaGAGCCGCAGTCCTCGCACACGTGCAGCTTCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: RGAVRRCRAGSW*SRSPRTRAASR Trigger: GCGAGAAGCTGCACGTGTGCGAGGACTGCGGCTTCACCAGCTCCCGGCCCGACACCTACGCACAGCACCGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585332.3 ENST00000633214.1 |
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| CDS CCA 72 bp | AGTTTTCTGTGTTTATTTGCCTCGTGGGGAGGACGCTaGCACACCGTATCAGGCTGCGCGGTGCAGGGCGCG | + |
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Preference number: 6 (lower is better) Translates to: SFLCLFASWGGR*HTVSGCAVQGA Trigger: CGCGCCCTGCACCGCGCAGCCTGATACGGTGTGCCAGCGTCCTCCCCACGAGGCAAATAAACACAGAAAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585332.3 ENST00000633214.1 |
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