Pregenerated sensors for OVOL2 (Homo sapiens)
Ensembl gene IDs: ENSG00000125850Ensembl transcript IDs: ENST00000278780.7, ENST00000462208.1, ENST00000483661.5, ENST00000486776.5, ENST00000494030.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCAACATACGTGGCAGTGTaGACGTCTGTCCTCCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: GECEQLRQTGHRLQGLTSTYVAV*TSVLPF Trigger: GAAGGGGAGGACAGACGTTCACACTGCCACGTATGT...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| 3UTR-3UTR CCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCACCACGTAGACATACGTaGCAGTGTGAACGTCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: GECEQLRQTGHRLQGLTSPRRHT*QCERLS Trigger: GGACAGACGTTCACACTGCCACGTATGTCTACGTGG...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| 3UTR-3UTR TCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCAAATGGACCCTACTGCTaGTGTTTCAAAAGGACACAG | + |
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Preference number: 2 (lower is better) Translates to: GECEQLRQTGHRLQGLTSNGPYC*CFKRTQ Trigger: CTGTGTCCTTTTGAAACATCAGCAGTAGGGTCCATT...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| 3UTR-3UTR CCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCAGACACAGAGGTGAACTaGTCACTTCTAATTAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: GECEQLRQTGHRLQGLTSDTEVN*SLLIKK Trigger: CTTCTTAATTAGAAGTGACCAGTTCACCTCTGTGTC...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| 3UTR-3UTR CAA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCACGGCAACTGACAATCTaGGAATGGACCCTACTGCTG | + |
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Preference number: 3 (lower is better) Translates to: GECEQLRQTGHRLQGLTSRQLTI*EWTLLL Trigger: CAGCAGTAGGGTCCATTCCAAGATTGTCAGTTGCCG...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR GCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCACGCTGCCGCTGCTGCTaGCGCCGTCGCTGCGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSRCRCC*RRRCGS Trigger: ACTGCCGCAGCGACGGCGGCAGCAGCAGCGGCAGCG...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR CCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCATCTCCCCCGCACGCCTaGCGACTCCCAGCCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSSPPHA*RLPASR Trigger: CCGGGAGGCTGGGAGTCGCCAGGCGTGCGGGGGAGA...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR GCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCAGGAGCTCATCCCAGCTaGGGACCGAGACCCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSGAHPS*GPRPPG Trigger: GCCTGGGGGTCTCGGTCCGCAGCTGGGATGAGCTCC...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR GCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCATCGCTCTCGGGGGCGTaGGGGGACGAGCTGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSSLSGA*GDELLS Trigger: AGAGAGCAGCTCGTCCCCGCACGCCCCCGAGAGCGA...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR GCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCACTGGCGACCGGGCGCTaGTTGGTCGCCAGGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSLATGR*LVARCP Trigger: TGGACACCTGGCGACCAAGCAGCGCCCGGTCGCCAG...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR CCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCACGACCGGGCGCTGCTTaGTCGCCAGGTGTCCATCGG | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSRPGAA*SPGVHR Trigger: CCGATGGACACCTGGCGACCAAGCAGCGCCCGGTCG...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR CCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCAACAGGTCCTCCTGGGTaGGGCCCGTGTAGCCGCAAT | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSTGPPG*GPCSRN Trigger: ATTGCGGCTACACGGGCCCCACCCAGGAGGACCTGT...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR TCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCACACAGGTCACAGCTGTaGACCACCGAGTCGCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSHRSQL*TTESLH Trigger: GTGCAGCGACTCGGTGGTTCACAGCTGTGACCTGTG...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR GCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCACGGTTCAGCATGCGCTaGAGACGGAAGCCCTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSRFSMR*RRKPLP Trigger: TGGCAAGGGCTTCCGTCTGCAGCGCATGCTGAACCG...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR GCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCAGGTGACGGTTCAGCATaGGCTGCAGACGGAAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSGDGSA*AADGSP Trigger: AGGGCTTCCGTCTGCAGCGCATGCTGAACCGTCACC...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR CCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCAAGACTTTGGGCATGGTaGGGTCCCCTCTCCCGACTG | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSRLWAW*GPLSRL Trigger: CAGTCGGGAGAGGGGACCCCACCATGCCCAAAGTCT...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR CCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCAGGAAGACTTTGGGCATaGTGGGGTCCCCTCTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSGRLWA*WGPLSR Trigger: TCGGGAGAGGGGACCCCACCATGCCCAAAGTCTTCC...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR CCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCAAACGAGCTGCCCGGATaGGCACTGTTCACGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSNELPG*ALFTCR Trigger: CCTGCACGTGAACAGTGCCCATCCGGGCAGCTCGTT...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR GCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCAGCAGACGGAAGCCCTTaGCACACAGGTCACAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSADGSP*HTGHSC Trigger: ACAGCTGTGACCTGTGTGGCAAGGGCTTCCGTCTGC...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR GCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCATGGGCACTGTTCACGTaGAGGTACAGGTCCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSWALFT*RYRSSW Trigger: CCAGGAGGACCTGTACCTGCACGTGAACAGTGCCCA...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR CCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCATCACCAGGAAGACTTTaGGCATGGTGGGGTCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSSPGRL*AWWGPL Trigger: GAGGGGACCCCACCATGCCCAAAGTCTTCCTGGTGA...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR CCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCACCTCCTCACTCAGGCTaGTATTCTCCTGGTGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSPPHSG*YSPGVR Trigger: CCGCACACCAGGAGAATACCAGCCTGAGTGAGGAGG...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR TCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCAGCCTTAAATCGCGAGTaGGACCACGCCGGGGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSALNRE*DHAGEK Trigger: TTTTTCCCCGGCGTGGTCTCACTCGCGATTTAAGGC...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR TCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCAGAGAGCAGCGCTGGGTaGAGGCTTTATTGCAGACGT | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSESSAG*RLYCRR Trigger: ACGTCTGCAATAAAGCCTTCACCCAGCGCTGCTCTC...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR GCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCAGAATGCCTGTGTGTGTaGGGACGTGCCTCTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSECLCV*GRASSG Trigger: ACCTGAAGAGGCACGTCCGCACACACACAGGCATTC...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR GCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCAGCTCGGCGACACCTATaGCTTAAATCGCGAGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSARRHL*LKSRVR Trigger: TCTCACTCGCGATTTAAGGCATAGGTGTCGCCGAGC...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR GCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCATGGGATGTAGGTGTCTaGCCTTTTCTCATCCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSWDVGV*PFLIRE Trigger: CTCCCGGATGAGAAAAGGGCAGACACCTACATCCCA...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR GCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCACCTTGCCGCAGAAGGTaGACAGGTGTCTTTTCACCT | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSPCRRR*TGVFSP Trigger: AGGTGAAAAGACACCTGTGCACCTTCTGCGGCAAGG...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR GCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCAGTGAATGTGAGCAACTaGGCCAGACAGGACACAGGT | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSVNVSN*ARQDTG Trigger: ACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCAC...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR CCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCATGCTGCTGCACCCCATaGATTTTCTTCAGGTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSCCCTP*IFFRWD Trigger: GTCCCACCTGAAGAAAATCCATGGGGTGCAGCAGCA...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR TCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCAGTCACTAACGGCAACTaGCAATCTTGGAATGGACCC | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSVTNGN*QSWNGP Trigger: GGGTCCATTCCAAGATTGTCAGTTGCCGTTAGTGAC...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR TCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCACTCTCCTTCCGTGTGTaGAAATCCTTGGGGGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSLSFRV*KSLGEK Trigger: TTTTTCCCCCAAGGATTTTCACACACGGAAGGAGAG...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR GCA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCACTTTATTGCAGACGTTaGATTTGTAGGGACGAATGC | + |
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Preference number: 4 (lower is better) Translates to: GECEQLRQTGHRLQGLTSLYCRR*ICRDEC Trigger: GCATTCGTCCCTACAAATGCAACGTCTGCAATAAAG...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS GCA 90 bp | CTTGTGTCGCTGCGGTCGCCCTCCTCCAGGAGGTCGTCAGACGTGTaGCAGCTGCCGGGTGCTGCGGGGGCGCGTCTGGTCAGGGATGCC | + |
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Preference number: 5 (lower is better) Translates to: LVSLRSPSSRRSSDV*QLPGAAGARLVRDA Trigger: GGCATCCCTGACCAGACGCGCCCCCGCAGCACCCGGCAGCTGGCACACGTCTGACGACCTCCTGGAGGAGGGCGACCGCAGCGACACAAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000483661.5 |
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| CDS GCA 90 bp | GGCCCAGTTGCGGGGCGCGCTGCCCTTCCCAAGGCCTTGTTCGGGTaGGCCCAGGACAACCGGCACAGCCTCTTGTGTCGCTGCGGTCGC | + |
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Preference number: 5 (lower is better) Translates to: GPVAGRAALPKALFG*AQDNRHSLLCRCGR Trigger: GCGACCGCAGCGACACAAGAGGCTGTGCCGGTTGTCCTGGGCGCACCCGAACAAGGCCTTGGGAAGGGCAGCGCGCCCCGCAACTGGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483661.5 |
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| CDS GCA 90 bp | CACGTGCCTGTGGTGAACTTGATTTTCGATCTGGCGACCGGGCGCTaGTTGGTCGCCAGGTGTCCATCGGGGCCCTCGGCGTCGCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: HVPVVNLIFDLATGR*LVARCPSGPSASPG Trigger: GCCCGGCGACGCCGAGGGCCCCGATGGACACCTGGCGACCAAGCAGCGCCCGGTCGCCAGATCGAAAATCAAGTTCACCACAGGCACGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278780.7 ENST00000483661.5 |
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| CDS GCA 90 bp | TTGTTCGGGTGCGCCCAGGACAACCGGCACAGCCTCTTGTGTCGCTaGGGTCGCCCTCCTCCAGGAGGTCGTCAGACGTGTGCCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: LFGCAQDNRHSLLCR*GRPPPGGRQTCASC Trigger: GCAGCTGGCACACGTCTGACGACCTCCTGGAGGAGGGCGACCGCAGCGACACAAGAGGCTGTGCCGGTTGTCCTGGGCGCACCCGAACAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483661.5 |
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| CDS CCA 90 bp | TGCCCGGATGGGCACTGTTCACGTGCAGGTACAGGTCCTCCTGGGTaGGGCCCGTGTAGCCGCAATCCTCGCAGACGTAGAGCTTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: CPDGHCSRAGTGPPG*GPCSRNPRRRRACP Trigger: GGGACAAGCTCTACGTCTGCGAGGATTGCGGCTACACGGGCCCCACCCAGGAGGACCTGTACCTGCACGTGAACAGTGCCCATCCGGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000278780.7 ENST00000483661.5 ENST00000494030.1 |
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| CDS-3UTR CAA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCAGCGACCGGGCGCTGCTaGGTCGCCAGGTGTCCATCG | + |
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Preference number: 5 (lower is better) Translates to: GECEQLRQTGHRLQGLTSATGRC*VARCPS Trigger: CGATGGACACCTGGCGACCAAGCAGCGCCCGGTCGC...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS GCA 90 bp | CCCGCACGCCTGGCGACTCCCAGCCTCCCGGCTCGGCGACACCTATaGCTTAAATCGCGAGTGAGACCACGCCGGGGAAAAAGTTTCATA | + |
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Preference number: 5 (lower is better) Translates to: PARLATPSLPARRHL*LKSRVRPRRGKSFI Trigger: TATGAAACTTTTTCCCCGGCGTGGTCTCACTCGCGATTTAAGGCATAGGTGTCGCCGAGCCGGGAGGCTGGGAGTCGCCAGGCGTGCGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS GCA 90 bp | GGATGTAGGTGTCTGCCCTTTTCTCATCCGGGAGCTCATCCCAGCTaGGGACCGAGACCCCCAGGCTCCTCCTCTTCACCAGGAAGACTT | + |
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Preference number: 5 (lower is better) Translates to: GCRCLPFSHPGAHPS*GPRPPGSSSSPGRL Trigger: AAGTCTTCCTGGTGAAGAGGAGGAGCCTGGGGGTCTCGGTCCGCAGCTGGGATGAGCTCCCGGATGAGAAAAGGGCAGACACCTACATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR CAA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCATGCAGACGGAAGCCCTaGCCACACAGGTCACAGCTG | + |
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Preference number: 5 (lower is better) Translates to: GECEQLRQTGHRLQGLTSCRRKP*PHRSQL Trigger: CAGCTGTGACCTGTGTGGCAAGGGCTTCCGTCTGCA...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR CAA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCAGTGTCGTTGAAGCCCTaGCCGCAGAAGGTGCACAGG | + |
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Preference number: 5 (lower is better) Translates to: GECEQLRQTGHRLQGLTSVSLKP*PQKVHR Trigger: CCTGTGCACCTTCTGCGGCAAGGGCTTCAACGACAC...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS GCA 90 bp | CAGGAGAGATGGCAATTCCCACGTTGGTGCAGGTCATACAGGCACTaGAGGGGACTCAGCTCAGTCGGCTCACCAGAGCCCCAGTTAATG | + |
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Preference number: 5 (lower is better) Translates to: QERWQFPRWCRSYRH*RGLSSVGSPEPQLM Trigger: CATTAACTGGGGCTCTGGTGAGCCGACTGAGCTGAGTCCCCTGCAGTGCCTGTATGACCTGCACCAACGTGGGAATTGCCATCTCTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486776.5 |
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| CDS CCA 90 bp | CAGGCAGCACTGATTTTCCAGCAGGAGAGATGGCAATTCCCACGTTaGTGCAGGTCATACAGGCACTGCAGGGGACTCAGCTCAGTCGGC | + |
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Preference number: 5 (lower is better) Translates to: QAALIFQQERWQFPR*CRSYRHCRGLSSVG Trigger: GCCGACTGAGCTGAGTCCCCTGCAGTGCCTGTATGACCTGCACCAACGTGGGAATTGCCATCTCTCCTGCTGGAAAATCAGTGCTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486776.5 |
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| CDS-3UTR CAA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCAGTGCCTGTGGTGAACTaGATTTTCGATCTGGCGACC | + |
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Preference number: 5 (lower is better) Translates to: GECEQLRQTGHRLQGLTSVPVVN*IFDLAT Trigger: GGTCGCCAGATCGAAAATCAAGTTCACCACAGGCAC...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR CAA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCATCCCACACGGTGTTCTaGGCCATCAGGATCATGAAA | + |
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Preference number: 5 (lower is better) Translates to: GECEQLRQTGHRLQGLTSSHTVF*AIRIMK Trigger: TTTCATGATCCTGATGGCCAAGAACACCGTGTGGGA...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR CAA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCATTTTTAGATGTCTTTTaGAGAAACGAGCTGCCCGGA | + |
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Preference number: 5 (lower is better) Translates to: GECEQLRQTGHRLQGLTSFLDVF*RNELPG Trigger: TCCGGGCAGCTCGTTTCTCAAAAAGACATCTAAAAA...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS-3UTR CAA 90 bp | GGTGAATGTGAGCAACTGCGCCAGACAGGACACAGGTTACAGGGCCTGACGTCACAAAATTCACTTGCCTaGCTTAAACAGCATTTCAAG | + |
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Preference number: 5 (lower is better) Translates to: GECEQLRQTGHRLQGLTSQNSLA*LKQHFK Trigger: CTTGAAATGCTGTTTAAGCAAGGCAAGTGAATTTTG...TGACGTCAGGCCCTGTAACCTGTGTCCTGTCTGGCGCAGTTGCTCACATTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS CAA 72 bp | GGCCCAGTTGCGGGGCGCGCTGCCCTTCCCAAGGCCTaGTTCGGGTGCGCCCAGGACAACCGGCACAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: GPVAGRAALPKA*FGCAQDNRHSL Trigger: GAGGCTGTGCCGGTTGTCCTGGGCGCACCCGAACAAGGCCTTGGGAAGGGCAGCGCGCCCCGCAACTGGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483661.5 |
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| CDS CAA 90 bp | GGCGGCCTAGGCCCAGTTGCGGGGCGCGCTGCCCTTCCCAAGGCCTaGTTCGGGTGCGCCCAGGACAACCGGCACAGCCTCTTGTGTCGC | + |
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Preference number: 6 (lower is better) Translates to: GGLGPVAGRAALPKA*FGCAQDNRHSLLCR Trigger: GCGACACAAGAGGCTGTGCCGGTTGTCCTGGGCGCACCCGAACAAGGCCTTGGGAAGGGCAGCGCGCCCCGCAACTGGGCCTAGGCCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483661.5 |
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| CDS GCA 72 bp | CTCCAGGAGGTCGTCAGACGTGTGCCAGCTGCCGGGTaGTGCGGGGGCGCGTCTGGTCAGGGATGCCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LQEVVRRVPAAG*CGGASGQGCPG Trigger: TCCAGGGCATCCCTGACCAGACGCGCCCCCGCAGCACCCGGCAGCTGGCACACGTCTGACGACCTCCTGGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000483661.5 |
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| CDS GCA 72 bp | GCGGGGCGCGCTGCCCTTCCCAAGGCCTTGTTCGGGTaGGCCCAGGACAACCGGCACAGCCTCTTGTGTCGC | + |
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Preference number: 6 (lower is better) Translates to: AGRAALPKALFG*AQDNRHSLLCR Trigger: GCGACACAAGAGGCTGTGCCGGTTGTCCTGGGCGCACCCGAACAAGGCCTTGGGAAGGGCAGCGCGCCCCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483661.5 |
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| CDS CAA 90 bp | GTGCCTGTGGTGAACTTGATTTTCGATCTGGCGACCGGGCGCTGCTaGGTCGCCAGGTGTCCATCGGGGCCCTCGGCGTCGCCGGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: VPVVNLIFDLATGRC*VARCPSGPSASPGS Trigger: CGAGCCCGGCGACGCCGAGGGCCCCGATGGACACCTGGCGACCAAGCAGCGCCCGGTCGCCAGATCGAAAATCAAGTTCACCACAGGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278780.7 ENST00000483661.5 |
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| CDS CAA 90 bp | CCCAAGGCCTTGTTCGGGTGCGCCCAGGACAACCGGCACAGCCTCTaGTGTCGCTGCGGTCGCCCTCCTCCAGGAGGTCGTCAGACGTGT | + |
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Preference number: 6 (lower is better) Translates to: PKALFGCAQDNRHSL*CRCGRPPPGGRQTC Trigger: ACACGTCTGACGACCTCCTGGAGGAGGGCGACCGCAGCGACACAAGAGGCTGTGCCGGTTGTCCTGGGCGCACCCGAACAAGGCCTTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483661.5 |
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| CDS GCA 72 bp | TGCGCCCAGGACAACCGGCACAGCCTCTTGTGTCGCTaGGGTCGCCCTCCTCCAGGAGGTCGTCAGACGTGT | + |
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Preference number: 6 (lower is better) Translates to: CAQDNRHSLLCR*GRPPPGGRQTC Trigger: ACACGTCTGACGACCTCCTGGAGGAGGGCGACCGCAGCGACACAAGAGGCTGTGCCGGTTGTCCTGGGCGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483661.5 |
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| CDS CAA 72 bp | TTGTTCGGGTGCGCCCAGGACAACCGGCACAGCCTCTaGTGTCGCTGCGGTCGCCCTCCTCCAGGAGGTCGT | + |
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Preference number: 6 (lower is better) Translates to: LFGCAQDNRHSL*CRCGRPPPGGR Trigger: ACGACCTCCTGGAGGAGGGCGACCGCAGCGACACAAGAGGCTGTGCCGGTTGTCCTGGGCGCACCCGAACAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483661.5 |
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| CDS GCA 72 bp | GTGGTGAACTTGATTTTCGATCTGGCGACCGGGCGCTaGTTGGTCGCCAGGTGTCCATCGGGGCCCTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: VVNLIFDLATGR*LVARCPSGPSA Trigger: CGCCGAGGGCCCCGATGGACACCTGGCGACCAAGCAGCGCCCGGTCGCCAGATCGAAAATCAAGTTCACCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278780.7 ENST00000483661.5 |
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| CDS CAA 72 bp | GTGAACTTGATTTTCGATCTGGCGACCGGGCGCTGCTaGGTCGCCAGGTGTCCATCGGGGCCCTCGGCGTCG | + |
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Preference number: 6 (lower is better) Translates to: VNLIFDLATGRC*VARCPSGPSAS Trigger: CGACGCCGAGGGCCCCGATGGACACCTGGCGACCAAGCAGCGCCCGGTCGCCAGATCGAAAATCAAGTTCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278780.7 ENST00000483661.5 |
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| CDS GCA 72 bp | CTGGCGACTCCCAGCCTCCCGGCTCGGCGACACCTATaGCTTAAATCGCGAGTGAGACCACGCCGGGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: LATPSLPARRHL*LKSRVRPRRGK Trigger: TTTTCCCCGGCGTGGTCTCACTCGCGATTTAAGGCATAGGTGTCGCCGAGCCGGGAGGCTGGGAGTCGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS GCA 72 bp | TGTCTGCCCTTTTCTCATCCGGGAGCTCATCCCAGCTaGGGACCGAGACCCCCAGGCTCCTCCTCTTCACCA | + |
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Preference number: 6 (lower is better) Translates to: CLPFSHPGAHPS*GPRPPGSSSSP Trigger: TGGTGAAGAGGAGGAGCCTGGGGGTCTCGGTCCGCAGCTGGGATGAGCTCCCGGATGAGAAAAGGGCAGACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278780.7 |
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| CDS TCA 72 bp | TGCAGACGGAAGCCCTTGCCACACAGGTCACAGCTGTaGACCACCGAGTCGCTGCACGTGCCTGTGGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: CRRKPLPHRSQL*TTESLHVPVVN Trigger: GTTCACCACAGGCACGTGCAGCGACTCGGTGGTTCACAGCTGTGACCTGTGTGGCAAGGGCTTCCGTCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000278780.7 ENST00000462208.1 ENST00000483661.5 ENST00000486776.5 ENST00000494030.1 |
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| CDS GCA 72 bp | TGGCAATTCCCACGTTGGTGCAGGTCATACAGGCACTaGAGGGGACTCAGCTCAGTCGGCTCACCAGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: WQFPRWCRSYRH*RGLSSVGSPEP Trigger: GGGCTCTGGTGAGCCGACTGAGCTGAGTCCCCTGCAGTGCCTGTATGACCTGCACCAACGTGGGAATTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486776.5 |
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| CDS TCA 72 bp | CAGCTCCAACCAGGGCGGGCTTCCCACAGGCAGCACTaGTTTTCCAGCAGGAGAGATGGCAATTCCCACGTT | + |
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Preference number: 6 (lower is better) Translates to: QLQPGRASHRQH*FSSRRDGNSHV Trigger: AACGTGGGAATTGCCATCTCTCCTGCTGGAAAATCAGTGCTGCCTGTGGGAAGCCCGCCCTGGTTGGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486776.5 |
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| CDS CAA 90 bp | ACAGGCAGCACTGATTTTCCAGCAGGAGAGATGGCAATTCCCACGTaGGTGCAGGTCATACAGGCACTGCAGGGGACTCAGCTCAGTCGG | + |
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Preference number: 6 (lower is better) Translates to: TGSTDFPAGEMAIPT*VQVIQALQGTQLSR Trigger: CCGACTGAGCTGAGTCCCCTGCAGTGCCTGTATGACCTGCACCAACGTGGGAATTGCCATCTCTCCTGCTGGAAAATCAGTGCTGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486776.5 |
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| CDS GCA 72 bp | TCCACAGATACAGATCTCAGCAAACTGGTAGGAAACTaGAGCTCCAACCAGGGCGGGCTTCCCACAGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: STDTDLSKLVGN*SSNQGGLPTGS Trigger: GCTGCCTGTGGGAAGCCCGCCCTGGTTGGAGCTGCAGTTTCCTACCAGTTTGCTGAGATCTGTATCTGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486776.5 |
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| CDS CCA 72 bp | CTGATTTTCCAGCAGGAGAGATGGCAATTCCCACGTTaGTGCAGGTCATACAGGCACTGCAGGGGACTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LIFQQERWQFPR*CRSYRHCRGLS Trigger: GCTGAGTCCCCTGCAGTGCCTGTATGACCTGCACCAACGTGGGAATTGCCATCTCTCCTGCTGGAAAATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486776.5 |
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| CDS CAA 72 bp | ACTGATTTTCCAGCAGGAGAGATGGCAATTCCCACGTaGGTGCAGGTCATACAGGCACTGCAGGGGACTCAG | + |
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Preference number: 6 (lower is better) Translates to: TDFPAGEMAIPT*VQVIQALQGTQ Trigger: CTGAGTCCCCTGCAGTGCCTGTATGACCTGCACCAACGTGGGAATTGCCATCTCTCCTGCTGGAAAATCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486776.5 |
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