Pregenerated sensors for OVCH1 (Homo sapiens)
Ensembl gene IDs: ENSG00000187950Ensembl transcript IDs: ENST00000318184.9, ENST00000537054.1, ENST00000539117.5
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TCAAAACAACCTCATGAGGCAGTGCATGGTAACAGGTGTTCTGTAGGGCAAGAATTCTTGGTGCTGAATTaGCTTAGGAACCAAGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: SKQPHEAVHGNRCSVGQEFLVLN*LRNQES Trigger: GCTTTCTTGGTTCCTAAGCCAATTCAGCACCAAGAA...TTCTTGCCCTACAGAACACCTGTTACCATGCACTGCCTCATGAGGTTGTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537054.1 |
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| 3UTR-3UTR CCA 90 bp | GAGAAAAATGTGAAGTTCAGTTGTTCCCCATCCAGCAGTCATACATGTAAAGTCCCACTGATAGGAAATTaGGTCTCAATATTGCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: EKNVKFSCSPSSSHTCKVPLIGN*VSILLF Trigger: GAAGAGCAATATTGAGACCCAATTTCCTATCAGTGG...GACTTTACATGTATGACTGCTGGATGGGGAACAACTGAACTTCACATTTTTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000539117.5 |
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| 3UTR-3UTR GCA 90 bp | TATTTTATCATCTTCCTCTGGCACCAGATTAGTAGTGAAAACTCTCCACTGATAATTGGGTCTCAATATTaGTCTTCTGTGATTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: YFIIFLWHQISSENSPLIIGSQY*SSVIAP Trigger: AGGAGCAATCACAGAAGAGCAATATTGAGACCCAAT...TATCAGTGGAGAGTTTTCACTACTAATCTGGTGCCAGAGGAAGATGATAAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000539117.5 |
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| 3UTR TCA 72 bp | CAGTCTCCCCACAAGAAGCTGTGGTCTTCTTGGTGCTaGATTGGCTTAGGAACCAAGAAAGCTCAGTGCTCA | + |
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Preference number: 3 (lower is better) Translates to: QSPHKKLWSSWC*IGLGTKKAQCS Trigger: TGAGCACTGAGCTTTCTTGGTTCCTAAGCCAATTCAGCACCAAGAAGACCACAGCTTCTTGTGGGGAGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537054.1 |
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| 3UTR CAA 72 bp | GATACTGCAGTCTCCCCACAAGAAGCTGTGGTCTTCTaGGTGCTGAATTGGCTTAGGAACCAAGAAAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: DTAVSPQEAVVF*VLNWLRNQESS Trigger: TGAGCTTTCTTGGTTCCTAAGCCAATTCAGCACCAAGAAGACCACAGCTTCTTGTGGGGAGACTGCAGTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537054.1 |
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| CDS-3UTR CCA 90 bp | ATTTTCATAGATACTGCAGTCTCCCCACAAGAAGCTGTGGTCTTCTTGGTGCTGCTGCATGATCCCTTCTaGCTTGGTCAGAAGAACATC | + |
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Preference number: 4 (lower is better) Translates to: IFIDTAVSPQEAVVFLVLLHDPF*LGQKNI Trigger: GATGTTCTTCTGACCAAGCCAGAAGGGATCATGCAG...CAGCACCAAGAAGACCACAGCTTCTTGTGGGGAGACTGCAGTATCTATGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537054.1 |
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| CDS-3UTR TCA 90 bp | GTATACATCATTTTCATAGATACTGCAGTCTCCCCACAAGAAGCTGTGGTCTTCTTCTTGGGATCTGCATaGTCCCTTCTGGCTTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: VYIIFIDTAVSPQEAVVFFLGSA*SLLAWS Trigger: TGACCAAGCCAGAAGGGATCATGCAGATCCCAAGAA...GAAGACCACAGCTTCTTGTGGGGAGACTGCAGTATCTATGAAAATGATGTATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537054.1 |
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| CDS-3UTR TCA 90 bp | TCAAAACAACCTCATGAGGCAGTGCATGGTAACAGGTGTTCTGTAGGGCAAGAACCCATAGTAGTTCTGTaGGAATTTCTTGGGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: SKQPHEAVHGNRCSVGQEPIVVL*EFLGIC Trigger: GCAGATCCCAAGAAATTCTCACAGAACTACTATGGG...TTCTTGCCCTACAGAACACCTGTTACCATGCACTGCCTCATGAGGTTGTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537054.1 |
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| CDS-3UTR GCA 90 bp | ATAGAAGTATACATCATTTTCATAGATACTGCAGTCTCCCCACAAGAAGCTGTGAACCTCATGAGGCAGTaGATGGTAACAGGTGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: IEVYIIFIDTAVSPQEAVNLMRQ*MVTGVL Trigger: CAGAACACCTGTTACCATGCACTGCCTCATGAGGTT...CACAGCTTCTTGTGGGGAGACTGCAGTATCTATGAAAATGATGTATACTTCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537054.1 |
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| CDS-3UTR CCA 90 bp | GAAATTGGGTCTCAATATTGCTCTTCTGTGATTGCTCCTGAATCATCTCTTCTACTGCATGATCCCTTCTaGCTTGGTCAGAAGAACATC | + |
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Preference number: 4 (lower is better) Translates to: EIGSQYCSSVIAPESSLLLHDPF*LGQKNI Trigger: GATGTTCTTCTGACCAAGCCAGAAGGGATCATGCAG...TAGAAGAGATGATTCAGGAGCAATCACAGAAGAGCAATATTGAGACCCAATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539117.5 |
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| CDS-3UTR CCA 90 bp | GTATACATCATTTTCATAGATACTGCAGTCTCCCCACAAGAAGCTGTGGTCTTCTTCTTGGTGCTGAATTaGCTTAGGAACCAAGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: VYIIFIDTAVSPQEAVVFFLVLN*LRNQES Trigger: GCTTTCTTGGTTCCTAAGCCAATTCAGCACCAAGAA...GAAGACCACAGCTTCTTGTGGGGAGACTGCAGTATCTATGAAAATGATGTATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537054.1 |
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| CDS-3UTR TCA 90 bp | AGTCAATTTATTTTATCATCTTCCTCTGGCACCAGATTAGTAGTGAAAACTCTCTTCTTGGGATCTGCATaGTCCCTTCTGGCTTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: SQFILSSSSGTRLVVKTLFLGSA*SLLAWS Trigger: TGACCAAGCCAGAAGGGATCATGCAGATCCCAAGAA...GAGAGTTTTCACTACTAATCTGGTGCCAGAGGAAGATGATAAAATAAATTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000539117.5 |
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| CDS-3UTR GCA 90 bp | ATAGAAGTATACATCATTTTCATAGATACTGCAGTCTCCCCACAAGAAGCTGTGGAATTTCTTGGGATCTaGATGATCCCTTCTGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: IEVYIIFIDTAVSPQEAVEFLGI*MIPSGL Trigger: CAAGCCAGAAGGGATCATGCAGATCCCAAGAAATTC...CACAGCTTCTTGTGGGGAGACTGCAGTATCTATGAAAATGATGTATACTTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537054.1 |
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| CDS-3UTR CCA 90 bp | AGAAGTATACATCATTTTCATAGATACTGCAGTCTCCCCACAAGAAGCTGTGGTGCTACTAATCTCCATTaGCAACCCATAGTAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: RSIHHFHRYCSLPTRSCGATNLH*QPIVVL Trigger: CAGAACTACTATGGGTTGCCAATGGAGATTAGTAGC...ACCACAGCTTCTTGTGGGGAGACTGCAGTATCTATGAAAATGATGTATACTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537054.1 |
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| CDS-3UTR TCA 90 bp | GAGAAAAATGTGAAGTTCAGTTGTTCCCCATCCAGCAGTCATACATGTAAAGTCAATATTGCTCTTCTGTaGTTGCTCCTGAATCATCTC | + |
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Preference number: 4 (lower is better) Translates to: EKNVKFSCSPSSSHTCKVNIALL*LLLNHL Trigger: GAGATGATTCAGGAGCAATCACAGAAGAGCAATATT...GACTTTACATGTATGACTGCTGGATGGGGAACAACTGAACTTCACATTTTTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000539117.5 |
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| CDS-3UTR CCA 90 bp | GTATACATCATTTTCATAGATACTGCAGTCTCCCCACAAGAAGCTGTGGTCTTCACAGACAAAAGTTGTTaGCTTCATCGGGAAGTTAAT | + |
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Preference number: 4 (lower is better) Translates to: VYIIFIDTAVSPQEAVVFTDKSC*LHREVN Trigger: ATTAACTTCCCGATGAAGCCAACAACTTTTGTCTGT...GAAGACCACAGCTTCTTGTGGGGAGACTGCAGTATCTATGAAAATGATGTATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000537054.1 |
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| CDS-3UTR TCA 90 bp | AGTCAATTTATTTTATCATCTTCCTCTGGCACCAGATTAGTAGTGAAAACTCTCCAAGTGCTCTCTGTTTaGACTTTGGGAAAGTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: SQFILSSSSGTRLVVKTLQVLSV*TLGKSG Trigger: ACCAGACTTTCCCAAAGTTCAAACAGAGAGCACTTG...GAGAGTTTTCACTACTAATCTGGTGCCAGAGGAAGATGATAAAATAAATTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000539117.5 |
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| CDS-3UTR TCA 90 bp | AGTCAATTTATTTTATCATCTTCCTCTGGCACCAGATTAGTAGTGAAAACTCTCCCCATAGTAGTTCTGTaGGAATTTCTTGGGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQFILSSSSGTRLVVKTLPIVVL*EFLGIC Trigger: GCAGATCCCAAGAAATTCTCACAGAACTACTATGGG...GAGAGTTTTCACTACTAATCTGGTGCCAGAGGAAGATGATAAAATAAATTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000539117.5 |
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| CDS-3UTR GCA 90 bp | AGTCAATTTATTTTATCATCTTCCTCTGGCACCAGATTAGTAGTGAAAACTCTCGAATTTCTTGGGATCTaGATGATCCCTTCTGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: SQFILSSSSGTRLVVKTLEFLGI*MIPSGL Trigger: CAAGCCAGAAGGGATCATGCAGATCCCAAGAAATTC...GAGAGTTTTCACTACTAATCTGGTGCCAGAGGAAGATGATAAAATAAATTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000539117.5 |
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| CDS-3UTR CCA 90 bp | AGTCAATTTATTTTATCATCTTCCTCTGGCACCAGATTAGTAGTGAAAACTCTCGCTACTAATCTCCATTaGCAACCCATAGTAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SQFILSSSSGTRLVVKTLATNLH*QPIVVL Trigger: CAGAACTACTATGGGTTGCCAATGGAGATTAGTAGC...GAGAGTTTTCACTACTAATCTGGTGCCAGAGGAAGATGATAAAATAAATTGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000539117.5 |
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| CDS-3UTR GCA 90 bp | AGTCAATTTATTTTATCATCTTCCTCTGGCACCAGATTAGTAGTGAAAACTCTCATTGGGTCTCAATATTaGTCTTCTGTGATTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SQFILSSSSGTRLVVKTLIGSQY*SSVIAP Trigger: AGGAGCAATCACAGAAGAGCAATATTGAGACCCAAT...GAGAGTTTTCACTACTAATCTGGTGCCAGAGGAAGATGATAAAATAAATTGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000539117.5 |
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| CDS CCA 90 bp | TGGGGGCAGGCTTCTTCCCCTCCTGCGATTCTTCTGGAAAGCCACTaGGGACTAAATGGAGGGATGCCACAGACATCATGCAGAATAGCT | + |
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Preference number: 5 (lower is better) Translates to: WGQASSPPAILLESH*GLNGGMPQTSCRIA Trigger: AGCTATTCTGCATGATGTCTGTGGCATCCCTCCATTTAGTCCCCAGTGGCTTTCCAGAAGAATCGCAGGAGGGGAAGAAGCCTGCCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS TCA 90 bp | CAAATACACCCGGCTTCCATGGCTGGACACAGCCAGCTCCCCAGCTaGCAATGCCATAGAGGACAAAGGGACCATTTTCATGTCTACATA | + |
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Preference number: 5 (lower is better) Translates to: QIHPASMAGHSQLPS*QCHRGQRDHFHVYI Trigger: TATGTAGACATGAAAATGGTCCCTTTGTCCTCTATGGCATTGTCAGCTGGGGAGCTGGCTGTGTCCAGCCATGGAAGCCGGGTGTATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS TCA 90 bp | GTACAAGGGCATGGAATGTCACCCTCACCAGCGGTCCAGGACTCATaGAAGTCATTGAGTAAAGTCTTCTTCCATGTAATCCACCTGCCG | + |
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Preference number: 5 (lower is better) Translates to: VQGHGMSPSPAVQDS*KSLSKVFFHVIHLP Trigger: CGGCAGGTGGATTACATGGAAGAAGACTTTACTCAATGACTTTCATGAGTCCTGGACCGCTGGTGAGGGTGACATTCCATGCCCTTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS-3UTR CAA 90 bp | ATTTTCATAGATACTGCAGTCTCCCCACAAGAAGCTGTGGTCTTCTTGGTGCTGGAAGCTGTGGTCTTCTaGGTGCTGAATTGGCTTAGG | + |
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Preference number: 5 (lower is better) Translates to: IFIDTAVSPQEAVVFLVLEAVVF*VLNWLR Trigger: CCTAAGCCAATTCAGCACCAAGAAGACCACAGCTTC...CAGCACCAAGAAGACCACAGCTTCTTGTGGGGAGACTGCAGTATCTATGAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537054.1 |
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| CDS CCA 90 bp | ATCAACTCAGACACTTTGGAGAAAATGCCAAGTGATGCCTTCACATaGTTGTTTCTTACGGGAACTGAACCTCCAGCACAACCAGCTACC | + |
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Preference number: 5 (lower is better) Translates to: INSDTLEKMPSDAFT*LFLTGTEPPAQPAT Trigger: GGTAGCTGGTTGTGCTGGAGGTTCAGTTCCCGTAAGAAACAACCATGTGAAGGCATCACTTGGCATTTTCTCCAAAGTGTCTGAGTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CCA 90 bp | CATAGTAGTTCTGTGAGAATTTCTTGGGATCTGCATGATCCCTTCTaGCTTGGTCAGAAGAACATCCTCACAAGGGACCAAGTGCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: HSSSVRISWDLHDPF*LGQKNILTRDQVLS Trigger: AGAGAGCACTTGGTCCCTTGTGAGGATGTTCTTCTGACCAAGCCAGAAGGGATCATGCAGATCCCAAGAAATTCTCACAGAACTACTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000318184.9 ENST00000537054.1 ENST00000539117.5 |
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| CDS-3UTR CAA 90 bp | ATTTTCATAGATACTGCAGTCTCCCCACAAGAAGCTGTGGTCTTCTTGGTGCTGATGATCCCTTCTGGCTaGGTCAGAAGAACATCCTCA | + |
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Preference number: 5 (lower is better) Translates to: IFIDTAVSPQEAVVFLVLMIPSG*VRRTSS Trigger: TGAGGATGTTCTTCTGACCAAGCCAGAAGGGATCAT...CAGCACCAAGAAGACCACAGCTTCTTGTGGGGAGACTGCAGTATCTATGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537054.1 |
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| CDS CCA 90 bp | TTGGCCCTTCTCACCTGCTCTGTTGATTCCTTCAGGTTTCTGTCATaGTCCCCAGCAATAATAGTCCAGGAGAGTGGATTATTCTTCAAT | + |
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Preference number: 5 (lower is better) Translates to: LALLTCSVDSFRFLS*SPAIIVQESGLFFN Trigger: ATTGAAGAATAATCCACTCTCCTGGACTATTATTGCTGGGGACCATGACAGAAACCTGAAGGAATCAACAGAGCAGGTGAGAAGGGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CCA 90 bp | CCTCACAAGGGACCAAGTGCTCTCTGTTTGAACTTTGGGAAAGTCTaGTTATTTTACTGTCCTTTGGACCTAGGACTTTCAAGACAATAT | + |
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Preference number: 5 (lower is better) Translates to: PHKGPSALCLNFGKV*LFYCPLDLGLSRQY Trigger: ATATTGTCTTGAAAGTCCTAGGTCCAAAGGACAGTAAAATAACCAGACTTTCCCAAAGTTCAAACAGAGAGCACTTGGTCCCTTGTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS-3UTR CAA 90 bp | TATTTTATCATCTTCCTCTGGCACCAGATTAGTAGTGAAAACTCTCCACTGATACCAAGTGCTCTCTGTTaGAACTTTGGGAAAGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: YFIIFLWHQISSENSPLIPSALC*NFGKVW Trigger: CCAGACTTTCCCAAAGTTCAAACAGAGAGCACTTGG...TATCAGTGGAGAGTTTTCACTACTAATCTGGTGCCAGAGGAAGATGATAAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000539117.5 |
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| CDS CCA 90 bp | GGACATTTGAATATTCTGATGTTTTGGAAATCTTGCCCCATCCACTaGATAAGCAAAGAATTCCTGGTTCAACTTTATCATCGCTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: GHLNILMFWKSCPIH*ISKEFLVQLYHRCQ Trigger: CTGACAGCGATGATAAAGTTGAACCAGGAATTCTTTGCTTATCCAGTGGATGGGGCAAGATTTCCAAAACATCAGAATATTCAAATGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CCA 90 bp | CAGACATCATGCAGAATAGCTTTTACGGTAGATACAGGATTGTTTTaGGGAGGTAACTTTGGTTCAAATTTGTTTAAAGACTCTGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: QTSCRIAFTVDTGLF*GGNFGSNLFKDSEG Trigger: GCCCTCAGAGTCTTTAAACAAATTTGAACCAAAGTTACCTCCCCAAAACAATCCTGTATCTACCGTAAAAGCTATTCTGCATGATGTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS-3UTR CAA 90 bp | AGTCAATTTATTTTATCATCTTCCTCTGGCACCAGATTAGTAGTGAAAACTCTCATGATCCCTTCTGGCTaGGTCAGAAGAACATCCTCA | + |
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Preference number: 5 (lower is better) Translates to: SQFILSSSSGTRLVVKTLMIPSG*VRRTSS Trigger: TGAGGATGTTCTTCTGACCAAGCCAGAAGGGATCAT...GAGAGTTTTCACTACTAATCTGGTGCCAGAGGAAGATGATAAAATAAATTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000539117.5 |
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| CDS-3UTR CAA 90 bp | AGTCAATTTATTTTATCATCTTCCTCTGGCACCAGATTAGTAGTGAAAACTCTCTCCACTGATAGGAAATaGGGTCTCAATATTGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: SQFILSSSSGTRLVVKTLSTDRK*GLNIAL Trigger: AAGAGCAATATTGAGACCCAATTTCCTATCAGTGGA...GAGAGTTTTCACTACTAATCTGGTGCCAGAGGAAGATGATAAAATAAATTGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000539117.5 |
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| CDS CCA 72 bp | CCTAGAAACCTCAGACCCACCTGCCATGGCCAACAGTaGGGGCAGGCTTCTTCCCCTCCTGCGATTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: PRNLRPTCHGQQ*GQASSPPAILL Trigger: CAGAAGAATCGCAGGAGGGGAAGAAGCCTGCCCCCACTGTTGGCCATGGCAGGTGGGTCTGAGGTTTCTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS TCA 72 bp | TTCCACACTTCAGTCCTAGGCTTCTGGGGTGGCCGATaGCCAGCAACAGCAACAAACCAGCACTGGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: FHTSVLGFWGGR*PATATNQHWPA Trigger: TGCTGGCCAGTGCTGGTTTGTTGCTGTTGCTGGTCATCGGCCACCCCAGAAGCCTAGGACTGAAGTGTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CAA 90 bp | CCAGCACACAGCATGGTCCTTCCCAGGGGAGGGAGGTTCATGCTCTaGAGCACAGTATTACACGCTCTGTCATCCATGATGGGAAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: PAHSMVLPRGGRFML*STVLHALSSMMGSS Trigger: GGAACTTCCCATCATGGATGACAGAGCGTGTAATACTGTGCTCAAGAGCATGAACCTCCCTCCCCTGGGAAGGACCATGCTGTGTGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CCA 72 bp | ATGCGAATTCCACACTTCAGTCCTAGGCTTCTGGGGTaGCCGATGACCAGCAACAGCAACAAACCAGCACTG | + |
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Preference number: 6 (lower is better) Translates to: MRIPHFSPRLLG*PMTSNSNKPAL Trigger: CAGTGCTGGTTTGTTGCTGTTGCTGGTCATCGGCCACCCCAGAAGCCTAGGACTGAAGTGTGGAATTCGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CCA 72 bp | CAATTGCACACAGTGGGCTGCGGTCAGAATCCACACTaGGTTGATGATGGCACCTCCACATTGGTAATCGCC | + |
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Preference number: 6 (lower is better) Translates to: QLHTVGCGQNPH*VDDGTSTLVIA Trigger: GGCGATTACCAATGTGGAGGTGCCATCATCAACCCAGTGTGGATTCTGACCGCAGCCCACTGTGTGCAATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CAA 72 bp | GCGCTGTGTGGGAGACATACTGGCCTCACCACCGAGTaGTACTCCAGAGGAGAGCTTAGTTGTATTAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: ALCGRHTGLTTE*YSRGELSCIRA Trigger: TGCCCTAATACAACTAAGCTCTCCTCTGGAGTACAACTCGGTGGTGAGGCCAGTATGTCTCCCACACAGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CAA 90 bp | AGAGGCTCTGCGCTGTGTGGGAGACATACTGGCCTCACCACCGAGTaGTACTCCAGAGGAGAGCTTAGTTGTATTAGGGCAATGTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: RGSALCGRHTGLTTE*YSRGELSCIRAMSE Trigger: CTCTGACATTGCCCTAATACAACTAAGCTCTCCTCTGGAGTACAACTCGGTGGTGAGGCCAGTATGTCTCCCACACAGCGCAGAGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CCA 72 bp | GTCCAGGAGAGTGGATTATTCTTCAATTGCACACAGTaGGCTGCGGTCAGAATCCACACTGGGTTGATGATG | + |
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Preference number: 6 (lower is better) Translates to: VQESGLFFNCTQ*AAVRIHTGLMM Trigger: CATCATCAACCCAGTGTGGATTCTGACCGCAGCCCACTGTGTGCAATTGAAGAATAATCCACTCTCCTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CAA 90 bp | CTAGAGAAGAATCTAGATCCCACGGCAGGTTCCTTACTTTTCATGTaGACCATGCGAATTCCACACTTCAGTCCTAGGCTTCTGGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LEKNLDPTAGSLLFM*TMRIPHFSPRLLGW Trigger: CCACCCCAGAAGCCTAGGACTGAAGTGTGGAATTCGCATGGTCAACATGAAAAGTAAGGAACCTGCCGTGGGATCTAGATTCTTCTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS TCA 72 bp | GTGTGTTCACAGACCTCTCTTTCTAACACATGCACTTaGATCTGCTGTAGGCGACTTGCTAGGCCACCATCT | + |
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Preference number: 6 (lower is better) Translates to: VCSQTSLSNTCT*ICCRRLARPPS Trigger: AGATGGTGGCCTAGCAAGTCGCCTACAGCAGATTCAAGTGCATGTGTTAGAAAGAGAGGTCTGTGAACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CCA 72 bp | TCCTGCGATTCTTCTGGAAAGCCACTGGGGACTAAATaGAGGGATGCCACAGACATCATGCAGAATAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: SCDSSGKPLGTK*RDATDIMQNSF Trigger: AAAGCTATTCTGCATGATGTCTGTGGCATCCCTCCATTTAGTCCCCAGTGGCTTTCCAGAAGAATCGCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CCA 72 bp | TCTGTCATGGTCCCCAGCAATAATAGTCCAGGAGAGTaGATTATTCTTCAATTGCACACAGTGGGCTGCGGT | + |
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Preference number: 6 (lower is better) Translates to: SVMVPSNNSPGE*IILQLHTVGCG Trigger: ACCGCAGCCCACTGTGTGCAATTGAAGAATAATCCACTCTCCTGGACTATTATTGCTGGGGACCATGACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CCA 72 bp | TCCCCACAAGAAGCTGTGGTCTTCTTGGTGCTGAATTaGCTTAGGAACCAAGAAAGCTCAGTGCTCATCAAC | + |
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Preference number: 6 (lower is better) Translates to: SPQEAVVFLVLN*LRNQESSVLIN Trigger: GTTGATGAGCACTGAGCTTTCTTGGTTCCTAAGCCAATTCAGCACCAAGAAGACCACAGCTTCTTGTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537054.1 |
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| CDS CAA 90 bp | AACTCAGACACTTTGGAGAAAATGCCAAGTGATGCCTTCACATGGTaGTTTCTTACGGGAACTGAACCTCCAGCACAACCAGCTACCCAG | + |
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Preference number: 6 (lower is better) Translates to: NSDTLEKMPSDAFTW*FLTGTEPPAQPATQ Trigger: CTGGGTAGCTGGTTGTGCTGGAGGTTCAGTTCCCGTAAGAAACAACCATGTGAAGGCATCACTTGGCATTTTCTCCAAAGTGTCTGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CCA 72 bp | CTCACCTGCTCTGTTGATTCCTTCAGGTTTCTGTCATaGTCCCCAGCAATAATAGTCCAGGAGAGTGGATTA | + |
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Preference number: 6 (lower is better) Translates to: LTCSVDSFRFLS*SPAIIVQESGL Trigger: TAATCCACTCTCCTGGACTATTATTGCTGGGGACCATGACAGAAACCTGAAGGAATCAACAGAGCAGGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS TCA 72 bp | CATGGAATGTCACCCTCACCAGCGGTCCAGGACTCATaGAAGTCATTGAGTAAAGTCTTCTTCCATGTAATC | + |
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Preference number: 6 (lower is better) Translates to: HGMSPSPAVQDS*KSLSKVFFHVI Trigger: GATTACATGGAAGAAGACTTTACTCAATGACTTTCATGAGTCCTGGACCGCTGGTGAGGGTGACATTCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS TCA 72 bp | GCTACTAATCTCCATTGGCAACCCATAGTAGTTCTGTaGGAATTTCTTGGGATCTGCATGATCCCTTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: ATNLHWQPIVVL*EFLGICMIPSG Trigger: GCCAGAAGGGATCATGCAGATCCCAAGAAATTCTCACAGAACTACTATGGGTTGCCAATGGAGATTAGTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000318184.9 ENST00000537054.1 ENST00000539117.5 |
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| CDS CAA 72 bp | AATCTAGATCCCACGGCAGGTTCCTTACTTTTCATGTaGACCATGCGAATTCCACACTTCAGTCCTAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: NLDPTAGSLLFM*TMRIPHFSPRL Trigger: AAGCCTAGGACTGAAGTGTGGAATTCGCATGGTCAACATGAAAAGTAAGGAACCTGCCGTGGGATCTAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CAA 72 bp | ACTTTGGAGAAAATGCCAAGTGATGCCTTCACATGGTaGTTTCTTACGGGAACTGAACCTCCAGCACAACCA | + |
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Preference number: 6 (lower is better) Translates to: TLEKMPSDAFTW*FLTGTEPPAQP Trigger: TGGTTGTGCTGGAGGTTCAGTTCCCGTAAGAAACAACCATGTGAAGGCATCACTTGGCATTTTCTCCAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CAA 90 bp | GCTTGGTCAGAAGAACATCCTCACAAGGGACCAAGTGCTCTCTGTTaGAACTTTGGGAAAGTCTGGTTATTTTACTGTCCTTTGGACCTA | + |
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Preference number: 6 (lower is better) Translates to: AWSEEHPHKGPSALC*NFGKVWLFYCPLDL Trigger: TAGGTCCAAAGGACAGTAAAATAACCAGACTTTCCCAAAGTTCAAACAGAGAGCACTTGGTCCCTTGTGAGGATGTTCTTCTGACCAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS TCA 72 bp | GTGTTACTGGGATACAAATCAGGATACTTGGCAGAGTaGTTTGTCCCTTCTTCTACCAATATAGCCAGACTC | + |
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Preference number: 6 (lower is better) Translates to: VLLGYKSGYLAE*FVPSSTNIARL Trigger: GAGTCTGGCTATATTGGTAGAAGAAGGGACAAATCACTCTGCCAAGTATCCTGATTTGTATCCCAGTAACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CCA 72 bp | GGACCAAGTGCTCTCTGTTTGAACTTTGGGAAAGTCTaGTTATTTTACTGTCCTTTGGACCTAGGACTTTCA | + |
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Preference number: 6 (lower is better) Translates to: GPSALCLNFGKV*LFYCPLDLGLS Trigger: TGAAAGTCCTAGGTCCAAAGGACAGTAAAATAACCAGACTTTCCCAAAGTTCAAACAGAGAGCACTTGGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CAA 72 bp | GAAGAACATCCTCACAAGGGACCAAGTGCTCTCTGTTaGAACTTTGGGAAAGTCTGGTTATTTTACTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: EEHPHKGPSALC*NFGKVWLFYCP Trigger: AGGACAGTAAAATAACCAGACTTTCCCAAAGTTCAAACAGAGAGCACTTGGTCCCTTGTGAGGATGTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS TCA 72 bp | AAGAACATCCTCACAAGGGACCAAGTGCTCTCTGTTTaGACTTTGGGAAAGTCTGGTTATTTTACTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: KNILTRDQVLSV*TLGKSGYFTVL Trigger: AAGGACAGTAAAATAACCAGACTTTCCCAAAGTTCAAACAGAGAGCACTTGGTCCCTTGTGAGGATGTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS TCA 72 bp | TTTGAGACAGGAATATTCTGTTCTTGCTTATCCTTCTaGAAGAGGCTGTACTCCCCAGAAGTCACAGTTATA | + |
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Preference number: 6 (lower is better) Translates to: FETGIFCSCLSF*KRLYSPEVTVI Trigger: TATAACTGTGACTTCTGGGGAGTACAGCCTCTTTCAGAAGGATAAGCAAGAACAGAATATTCCTGTCTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CCA 72 bp | TGGTTCAACTTTATCATCGCTGTCAGGAAGACAGATTaGCTGAACAGCATTTCCAAACTTGACTTTGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: WFNFIIAVRKTD*LNSISKLDFVF Trigger: AAACACAAAGTCAAGTTTGGAAATGCTGTTCAGCCAATCTGTCTTCCTGACAGCGATGATAAAGTTGAACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CAA 72 bp | AGCAGTGCAATATCAGGACTCATATATTCACGGCTGTaGTATTCAGGATGGGTAATAATTTTTGAGACAGGA | + |
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Preference number: 6 (lower is better) Translates to: SSAISGLIYSRL*YSGWVIIFETG Trigger: TCCTGTCTCAAAAATTATTACCCATCCTGAATACAACAGCCGTGAATATATGAGTCCTGATATTGCACTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CCA 72 bp | AAAGTCCTCAAATGTCAACTTTATAATGTGCTTCTCTaGAGCACAAATGAACCAATGACACCTTGTGTTACT | + |
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Preference number: 6 (lower is better) Translates to: KVLKCQLYNVLL*STNEPMTPCVT Trigger: AGTAACACAAGGTGTCATTGGTTCATTTGTGCTCCAGAGAAGCACATTATAAAGTTGACATTTGAGGACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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| CDS CCA 72 bp | GTAAACACGCAGATGACCATGACAGACAAAAGTTGTTaGCTTCATCGGGAAGTTAATAATATTAAGCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: VNTQMTMTDKSC*LHREVNNIKLN Trigger: ATTCAGCTTAATATTATTAACTTCCCGATGAAGCCAACAACTTTTGTCTGTCATGGTCATCTGCGTGTTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000318184.9 ENST00000537054.1 ENST00000539117.5 |
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| CDS CAA 90 bp | TTTAGATACAGCAGTGCAATATCAGGACTCATATATTCACGGCTGTaGTATTCAGGATGGGTAATAATTTTTGAGACAGGAATATTCTGT | + |
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Preference number: 6 (lower is better) Translates to: FRYSSAISGLIYSRL*YSGWVIIFETGIFC Trigger: ACAGAATATTCCTGTCTCAAAAATTATTACCCATCCTGAATACAACAGCCGTGAATATATGAGTCCTGATATTGCACTGCTGTATCTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318184.9 |
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