Pregenerated sensors for OVCA2 (Homo sapiens)
Ensembl gene IDs: ENSG00000262664Ensembl transcript IDs: ENST00000572195.3
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TGGGTCTCAAGAATTGATAGTTGTCTCTTAACTGGTTCTGGTGAGGCGCACTCAGGTCCTGGGAGGGCATaGATGACGGAGGCTGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: WVSRIDSCLLTGSGEAHSGPGRA*MTEAAP Trigger: AGGGGCAGCCTCCGTCATCCATGCCCTCCCAGGACC...TGAGTGCGCCTCACCAGAACCAGTTAAGAGACAACTATCAATTCTTGAGACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGCTCCCCTTTTCTTCAGTACAGGGCAGGGCCCTTATAATTTGGGTCTCAAGGTGAGTGGAGGGTCCTaGGAGGGCATGGATGACGGA | + |
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Preference number: 2 (lower is better) Translates to: CAPLFFSTGQGPYNLGLKVSGGS*EGMDDG Trigger: TCCGTCATCCATGCCCTCCCAGGACCCTCCACTCAC...CTTGAGACCCAAATTATAAGGGCCCTGCCCTGTACTGAAGAAAAGGGGAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| 3UTR TCA 72 bp | CTCTTAACTGGTTCTGGTGAGGCGCACTCACAGCAGTaGGTGGAGGGTCCTGGGAGGGCATGGATGACGGAG | + |
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Preference number: 3 (lower is better) Translates to: LLTGSGEAHSQQ*VEGPGRAWMTE Trigger: CTCCGTCATCCATGCCCTCCCAGGACCCTCCACTCACTGCTGTGAGTGCGCCTCACCAGAACCAGTTAAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| 3UTR CCA 72 bp | CCCTTTTCTTCAGTACAGGGCAGGGCCCTTATAATTTaGGTCTCAAGAATTGATAGTTGTCTCTTAACTGGT | + |
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Preference number: 3 (lower is better) Translates to: PFSSVQGRALII*VSRIDSCLLTG Trigger: ACCAGTTAAGAGACAACTATCAATTCTTGAGACCCAAATTATAAGGGCCCTGCCCTGTACTGAAGAAAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| CDS-3UTR GCA 90 bp | CTCCCCTTTTCTTCAGTACAGGGCAGGGCCCTTATAATTTGGGTCTCAAGAATTACCCGCAGGGGTCGCTaGGCGGCCATTATGCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: LPFSSVQGRALIIWVSRITRRGR*AAIMPG Trigger: GCCGGGCATAATGGCCGCGCAGCGACCCCTGCGGGT...AATTCTTGAGACCCAAATTATAAGGGCCCTGCCCTGTACTGAAGAAAAGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| CDS-3UTR GCA 90 bp | TGGGTCTCAAGAATTGATAGTTGTCTCTTAACTGGTTCTGGTGAGGCGCACTCAAAGCCCCGCTCGCTCTaGCGGAAGCCCGCCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: WVSRIDSCLLTGSGEAHSKPRSL*RKPARH Trigger: GTGCCTGGCGGGCTTCCGGCAGAGCGAGCGGGGCTT...TGAGTGCGCCTCACCAGAACCAGTTAAGAGACAACTATCAATTCTTGAGACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| CDS-3UTR GCA 90 bp | ACCCTCCTAATCCAGGGCTCTCCAACCATATTCATGTTTGCGTTTTCACAAGTCGCTGCGCGGCCATTATaGCCGGCAAGGAGCGACGGA | + |
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Preference number: 4 (lower is better) Translates to: TLLIQGSPTIFMFAFSQVAARPL*PARSDG Trigger: TCCGTCGCTCCTTGCCGGGCATAATGGCCGCGCAGC...GACTTGTGAAAACGCAAACATGAATATGGTTGGAGAGCCCTGGATTAGGAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| CDS-3UTR GCA 90 bp | TGTGCTCCCCTTTTCTTCAGTACAGGGCAGGGCCCTTATAATTTGGGTCTCAAGGGCGGGCTCTTCCAATaGGGAGAAAACGTCGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: CAPLFFSTGQGPYNLGLKGGLFQ*GENVGL Trigger: GAGGCCGACGTTTTCTCCGCATTGGAAGAGCCCGCC...CTTGAGACCCAAATTATAAGGGCCCTGCCCTGTACTGAAGAAAAGGGGAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| CDS-3UTR GCA 90 bp | CTCCCCTTTTCTTCAGTACAGGGCAGGGCCCTTATAATTTGGGTCTCAAGAATTATTCCTCCAGGCCCCTaGAGACGGCGGGCTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: LPFSSVQGRALIIWVSRIIPPGP*RRRALP Trigger: TGGAAGAGCCCGCCGTCTGCAGGGGCCTGGAGGAAT...AATTCTTGAGACCCAAATTATAAGGGCCCTGCCCTGTACTGAAGAAAAGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| CDS-3UTR GCA 90 bp | CCTAATCCAGGGCTCTCCAACCATATTCATGTTTGCGTTTTCACAAGTCAATGTGAAGCGGGGATCGCCTaGCTGGCCCAGGGCACACAC | + |
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Preference number: 4 (lower is better) Translates to: PNPGLSNHIHVCVFTSQCEAGIA*LAQGTH Trigger: GTGTGTGCCCTGGGCCAGGCAGGCGATCCCCGCTTC...ACATTGACTTGTGAAAACGCAAACATGAATATGGTTGGAGAGCCCTGGATTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| CDS-3UTR GCA 90 bp | CTCTCCAACCATATTCATGTTTGCGTTTTCACAAGTCAATGTCCATTAAGGCCTCACCAGCCTCGAGGCTaGTCCTCCGGAGGGCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LSNHIHVCVFTSQCPLRPHQPRG*SSGGQD Trigger: GTCCTGCCCTCCGGAGGAGCAGCCTCGAGGCTGGTG...AGGCCTTAATGGACATTGACTTGTGAAAACGCAAACATGAATATGGTTGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| CDS-3UTR GCA 90 bp | ACCCTCCTAATCCAGGGCTCTCCAACCATATTCATGTTTGCGTTTTCACAAGTCACGCTGGGGTGCAGCTaGTGGAATGAAGTGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: TLLIQGSPTIFMFAFSQVTLGCS*WNEVAT Trigger: GGTGGCCACTTCATTCCAGCAGCTGCACCCCAGCGT...GACTTGTGAAAACGCAAACATGAATATGGTTGGAGAGCCCTGGATTAGGAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| CDS-3UTR GCA 90 bp | GCTCTCCAACCATATTCATGTTTGCGTTTTCACAAGTCAATGTCCATTAAGGCCCATGGTGCCAGCCTCTaGCTTCCCCATGTCACCCTC | + |
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Preference number: 4 (lower is better) Translates to: ALQPYSCLRFHKSMSIKAHGASL*LPHVTL Trigger: GAGGGTGACATGGGGAAGGCAGAGGCTGGCACCATG...GGCCTTAATGGACATTGACTTGTGAAAACGCAAACATGAATATGGTTGGAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| CDS-3UTR GCA 90 bp | AGGGCCCTTATAATTTGGGTCTCAAGAATTGATAGTTGTCTCTTAACTGGTTCTCCCCAGCCTGTTCAGTaGCTGTGCCACCATCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: RALIIWVSRIDSCLLTGSPQPVQ*LCHHPQ Trigger: CTGGGGATGGTGGCACAGGCACTGAACAGGCTGGGG...AGAACCAGTTAAGAGACAACTATCAATTCTTGAGACCCAAATTATAAGGGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| CDS-3UTR GCA 90 bp | CTCTCCAACCATATTCATGTTTGCGTTTTCACAAGTCAATGTCCATTAAGGCCTTGGCAGTCACCATGGTaGCAGCCTCTGCCTTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LSNHIHVCVFTSQCPLRPWQSPW*QPLPSP Trigger: TGGGGAAGGCAGAGGCTGGCACCATGGTGACTGCCA...AGGCCTTAATGGACATTGACTTGTGAAAACGCAAACATGAATATGGTTGGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| CDS-3UTR GCA 90 bp | TGTGCTCCCCTTTTCTTCAGTACAGGGCAGGGCCCTTATAATTTGGGTCTCAAGAATGACAAGGGCCTTTaGAGGATGGATTCCTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: CAPLFFSTGQGPYNLGLKNDKGL*RMDSLN Trigger: GTTCAAGGAATCCATCCTGCAAAGGCCCTTGTCATT...CTTGAGACCCAAATTATAAGGGCCCTGCCCTGTACTGAAGAAAAGGGGAGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| CDS-3UTR GCA 90 bp | CCTAATCCAGGGCTCTCCAACCATATTCATGTTTGCGTTTTCACAAGTCAATGTAAAACGTCGGCCTCCTaGTCTGAAAACCACCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: PNPGLSNHIHVCVFTSQCKTSAS*SENHQP Trigger: AGGCTGGTGGTTTTCAGAGCAGGAGGCCGACGTTTT...ACATTGACTTGTGAAAACGCAAACATGAATATGGTTGGAGAGCCCTGGATTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| CDS-3UTR GCA 90 bp | CTCTCCAACCATATTCATGTTTGCGTTTTCACAAGTCAATGTCCATTAAGGCCTCTTGATCTTTCACTCTaGAAACTGGTCCAAGAACTT | + |
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Preference number: 4 (lower is better) Translates to: LSNHIHVCVFTSQCPLRPLDLSL*KLVQEL Trigger: AAGTTCTTGGACCAGTTTGCAGAGTGAAAGATCAAG...AGGCCTTAATGGACATTGACTTGTGAAAACGCAAACATGAATATGGTTGGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| CDS-3UTR CAA 90 bp | TGTGCTCCCCTTTTCTTCAGTACAGGGCAGGGCCCTTATAATTTGGGTCTCAAGGATGGCTCCGGGAAATaGGCTGGCCAGTTGCACACT | + |
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Preference number: 5 (lower is better) Translates to: CAPLFFSTGQGPYNLGLKDGSGK*AGQLHT Trigger: AGTGTGCAACTGGCCAGCCAATTTCCCGGAGCCATC...CTTGAGACCCAAATTATAAGGGCCCTGCCCTGTACTGAAGAAAAGGGGAGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| CDS-3UTR CAA 90 bp | ACCCTCCTAATCCAGGGCTCTCCAACCATATTCATGTTTGCGTTTTCACAAGTCAAATTGGCTGGCCAGTaGCACACTCTCCTGAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: TLLIQGSPTIFMFAFSQVKLAGQ*HTLLRG Trigger: CCCTCTCAGGAGAGTGTGCAACTGGCCAGCCAATTT...GACTTGTGAAAACGCAAACATGAATATGGTTGGAGAGCCCTGGATTAGGAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| CDS-3UTR CAA 90 bp | GGGCTCTCCAACCATATTCATGTTTGCGTTTTCACAAGTCAATGTCCATTAAGGTGCAGGATGGATTCCTaGAACCCAATGCCCCGGGGA | + |
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Preference number: 5 (lower is better) Translates to: GLSNHIHVCVFTSQCPLRCRMDS*NPMPRG Trigger: TCCCCGGGGCATTGGGTTCAAGGAATCCATCCTGCA...CCTTAATGGACATTGACTTGTGAAAACGCAAACATGAATATGGTTGGAGAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| CDS-3UTR CAA 90 bp | AGGGCCCTTATAATTTGGGTCTCAAGAATTGATAGTTGTCTCTTAACTGGTTCTATGTCCATTAAGGCCTaGTGCTCCCCTTTTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: RALIIWVSRIDSCLLTGSMSIKA*CSPFLQ Trigger: CTGAAGAAAAGGGGAGCACAAGGCCTTAATGGACAT...AGAACCAGTTAAGAGACAACTATCAATTCTTGAGACCCAAATTATAAGGGCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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| CDS-3UTR CAA 90 bp | ACCCTCCTAATCCAGGGCTCTCCAACCATATTCATGTTTGCGTTTTCACAAGTCCAACCATATTCATGTTaGCGTTTTCACAAGTCAATG | + |
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Preference number: 5 (lower is better) Translates to: TLLIQGSPTIFMFAFSQVQPYSC*RFHKSM Trigger: CATTGACTTGTGAAAACGCAAACATGAATATGGTTG...GACTTGTGAAAACGCAAACATGAATATGGTTGGAGAGCCCTGGATTAGGAGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572195.3 |
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