RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OTX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000115507

Ensembl transcript IDs: ENST00000282549.7, ENST00000366671.7, ENST00000405984.8, ENST00000476383.1, ENST00000477348.1, ENST00000484066.2

Found 465 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCCAGCGCAGGGCGGGGCGGGATGCGGCTCTGTGCGCGGAAGGCTaGGGACGCGCTCCTCCGGCGGGCCTAGCCCTGGCGCGCCCCAGC +
Preference number: 1 (lower is better)
Translates to: VQRRAGRDAALCAEG*GRAPPAGLALARPS
Trigger: GCTGGGGCGCGCCAGGGCTAGGCCCGCCGGAGGAGCGCGTCCCCAGCCTTCCGCGCACAGAGCCGCATCCCGCCCCGCCCTGCGCTGGAC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR GCA 90 bp AAGCTTGAACCAGTCCAGCGCAGGGCGGGGCGGGATGCGGCTCTGTaGGCGGAAGGCTGGGGACGCGCTCCTCCGGCGGGCCTAGCCCTG +
Preference number: 1 (lower is better)
Translates to: KLEPVQRRAGRDAAL*AEGWGRAPPAGLAL
Trigger: CAGGGCTAGGCCCGCCGGAGGAGCGCGTCCCCAGCCTTCCGCGCACAGAGCCGCATCCCGCCCCGCCCTGCGCTGGACTGGTTCAAGCTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR TCA 90 bp GGAACGGACCTGACTATGTACAGCGTTCCCGCCGAGGCGGAAGCTTaGACCAGTCCAGCGCAGGGCGGGGCGGGATGCGGCTCTGTGCGC +
Preference number: 1 (lower is better)
Translates to: GTDLTMYSVPAEAEA*TSPAQGGAGCGSVR
Trigger: GCGCACAGAGCCGCATCCCGCCCCGCCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGCGGGAACGCTGTACATAGTCAGGTCCGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR GCA 90 bp CTGGCCGTAGGACATGGGATAAGAGGCTGCTGCGGTGGCGGCGCCTaGAGCTACGGAGCGCTGCATACACGAGGTGTTGCTAGGCGCGGC +
Preference number: 1 (lower is better)
Translates to: LAVGHGIRGCCGGGA*SYGALHTRGVARRG
Trigger: GCCGCGCCTAGCAACACCTCGTGTATGCAGCGCTCCGTAGCTGCAGGCGCCGCCACCGCAGCAGCCTCTTATCCCATGTCCTACGGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR GCA 90 bp TTGGCCGTAGCTGCCGCCCTGGCCGTAGGACATGGGATAAGAGGCTaGTGCGGTGGCGGCGCCTGCAGCTACGGAGCGCTGCATACACGA +
Preference number: 1 (lower is better)
Translates to: LAVAAALAVGHGIRG*CGGGACSYGALHTR
Trigger: TCGTGTATGCAGCGCTCCGTAGCTGCAGGCGCCGCCACCGCAGCAGCCTCTTATCCCATGTCCTACGGCCAGGGCGGCAGCTACGGCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CCA 90 bp AGCTCTCCCGCACTGGAGAGGACTTCTTCTTGGCTGGGCGGCTCTTaGTTCCGCTCCCGCTCTGCTGCTGCTGGCGGCATTTGGCGCGGC +
Preference number: 1 (lower is better)
Translates to: SSPALERTSSWLGGS*FRSRSAAAGGIWRG
Trigger: GCCGCGCCAAATGCCGCCAGCAGCAGCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCAAGAAGAAGTCCTCTCCAGTGCGGGAGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CCA 90 bp TTCGGAGCCCGAGCTCTCCCGCACTGGAGAGGACTTCTTCTTGGCTaGGCGGCTCTTGGTTCCGCTCCCGCTCTGCTGCTGCTGGCGGCA +
Preference number: 1 (lower is better)
Translates to: FGARALPHWRGLLLG*AALGSAPALLLLAA
Trigger: TGCCGCCAGCAGCAGCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCAAGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCGGGCTCCGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CCA 90 bp AGCTGCCGCCCTGGCCGTAGGACATGGGATAAGAGGCTGCTGCGGTaGCGGCGCCTGCAGCTACGGAGCGCTGCATACACGAGGTGTTGC +
Preference number: 1 (lower is better)
Translates to: SCRPGRRTWDKRLLR*RRLQLRSAAYTRCC
Trigger: GCAACACCTCGTGTATGCAGCGCTCCGTAGCTGCAGGCGCCGCCACCGCAGCAGCCTCTTATCCCATGTCCTACGGCCAGGGCGGCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CCA 90 bp TGCTTTCGGAGCCCGAGCTCTCCCGCACTGGAGAGGACTTCTTCTTaGCTGGGCGGCTCTTGGTTCCGCTCCCGCTCTGCTGCTGCTGGC +
Preference number: 1 (lower is better)
Translates to: CFRSPSSPALERTSS*LGGSWFRSRSAAAG
Trigger: GCCAGCAGCAGCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCAAGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCGGGCTCCGAAAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CCA 90 bp AGAGCTGGACGCCGAGCTAGAGGACGAGGCAGAGCTGGACACAGCTaGCGGCGTGAATTGGCCACTGCTTTCGGAGCCCGAGCTCTCCCG +
Preference number: 1 (lower is better)
Translates to: RAGRRARGRGRAGHS*RRELATAFGARALP
Trigger: CGGGAGAGCTCGGGCTCCGAAAGCAGTGGCCAATTCACGCCGCCAGCTGTGTCCAGCTCTGCCTCGTCCTCTAGCTCGGCGTCCAGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CCA 90 bp CGGCGTGAATTGGCCACTGCTTTCGGAGCCCGAGCTCTCCCGCACTaGAGAGGACTTCTTCTTGGCTGGGCGGCTCTTGGTTCCGCTCCC +
Preference number: 1 (lower is better)
Translates to: RRELATAFGARALPH*RGLLLGWAALGSAP
Trigger: GGGAGCGGAACCAAGAGCCGCCCAGCCAAGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCGGGCTCCGAAAGCAGTGGCCAATTCACGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CCA 90 bp GAGCTAGAGGACGAGGCAGAGCTGGACACAGCTGGCGGCGTGAATTaGCCACTGCTTTCGGAGCCCGAGCTCTCCCGCACTGGAGAGGAC +
Preference number: 1 (lower is better)
Translates to: ELEDEAELDTAGGVN*PLLSEPELSRTGED
Trigger: GTCCTCTCCAGTGCGGGAGAGCTCGGGCTCCGAAAGCAGTGGCCAATTCACGCCGCCAGCTGTGTCCAGCTCTGCCTCGTCCTCTAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR TCA 90 bp CAGCAGCGGCGCCAGGCTCCTTGTAATCCAAGCAGTCGGCAGAGTTaGAGGCAAGCCCAGAGCCACCGTAGCCTTGGTGGTGGTGGTGGT +
Preference number: 1 (lower is better)
Translates to: QQRRQAPCNPSSRQS*RQAQSHRSLGGGGG
Trigger: ACCACCACCACCACCAAGGCTACGGTGGCTCTGGGCTTGCCTTCAACTCTGCCGACTGCTTGGATTACAAGGAGCCTGGCGCCGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR GCA 90 bp TGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTaGGTTTCTTCTCCTCTTTCATTCCTGGGCTCACAAGACCTGGAA +
Preference number: 1 (lower is better)
Translates to: CSSSNRIGTTEGAGS*VSSPLSFLGSQDLE
Trigger: TTCCAGGTCTTGTGAGCCCAGGAATGAAAGAGGAGAAGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR GCA 90 bp GTGTTGGGCTCAAACAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTaGAAGTGCTTAATAGCTGTCCAGAAAGACTGGAAGGGGAGGCTT +
Preference number: 1 (lower is better)
Translates to: VLGSNSGSERRASEG*KCLIAVQKDWKGRL
Trigger: AAGCCTCCCCTTCCAGTCTTTCTGGACAGCTATTAAGCACTTGCAGCCTTCGGAGGCTCTGCGCTCTGATCCGCTGTTTGAGCCCAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR GCA 90 bp GGCTCAAACAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTGCAAGTaGTTAATAGCTGTCCAGAAAGACTGGAAGGGGAGGCTTAAGAGT +
Preference number: 1 (lower is better)
Translates to: GSNSGSERRASEGCK*LIAVQKDWKGRLKS
Trigger: ACTCTTAAGCCTCCCCTTCCAGTCTTTCTGGACAGCTATTAAGCACTTGCAGCCTTCGGAGGCTCTGCGCTCTGATCCGCTGTTTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR CCA 90 bp AAGGGGCAGCAGTCTGCGCGGGAGGAACTCTTAGTGGTTTTGATTTaGAGTAGTGTGCGGGTGCTCCAATGGGCAGAAACACGCCAGTTA +
Preference number: 1 (lower is better)
Translates to: KGQQSAREELLVVLI*SSVRVLQWAETRQL
Trigger: TAACTGGCGTGTTTCTGCCCATTGGAGCACCCGCACACTACTCCAAATCAAAACCACTAAGAGTTCCTCCCGCGCAGACTGCTGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR TCA 90 bp CAAATTACTTTCCCACCTACTGGACGAAGCGGCCAAAGCCAAAATTaGTACACAGGCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAG +
Preference number: 1 (lower is better)
Translates to: QITFPPTGRSGQSQN*YTGARALRRFRRTK
Trigger: CTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGCCTGTGTATCAATTTTGGCTTTGGCCGCTTCGTCCAGTAGGTGGGAAAGTAATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR TCA 90 bp CAACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTGGAACGGACCTaGCTATGTACAGCGTTCCCGCCGAGGCGGAAGCTTGAACCAGTC +
Preference number: 1 (lower is better)
Translates to: QPTATKKFKWSLERT*LCTAFPPRRKLEPV
Trigger: GACTGGTTCAAGCTTCCGCCTCGGCGGGAACGCTGTACATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR TCA 90 bp TCTTCTCCTCTTTCATTCCTGGGCTCACAAGACCTGGAACCGCCATaGGGCTTGGTCCTTATAGTCCAGACAGTCGGGGGAGTTGAAGTT +
Preference number: 1 (lower is better)
Translates to: SSPLSFLGSQDLEPP*GLVLIVQTVGGVEV
Trigger: AACTTCAACTCCCCCGACTGTCTGGACTATAAGGACCAAGCCTCATGGCGGTTCCAGGTCTTGTGAGCCCAGGAATGAAAGAGGAGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CCA 90 bp TTCAGTTCAACCAACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTaGAACGGACCTGACTATGTACAGCGTTCCCGCCGAGGCGGAAGC +
Preference number: 1 (lower is better)
Translates to: FSSTNQQQLKSLSGP*NGPDYVQRSRRGGS
Trigger: GCTTCCGCCTCGGCGGGAACGCTGTACATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTTGGTTGAACTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR GCA 90 bp GATACACAGGCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTaGACTAAAAACTCACTAGACAAAACAAGGGTGTTGAAAGAGAGA +
Preference number: 1 (lower is better)
Translates to: DTQARGLSADFGERR*TKNSLDKTRVLKER
Trigger: TCTCTCTTTCAACACCCTTGTTTTGTCTAGTGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGCCTGTGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR TCA 90 bp CTTGTCTGTTTCCTCCACACTTCGGATATCCCGCGCCCAGCTTCCTaGAACCAAGCGGTTCTCTTCAATAAATACACAGAGGGAGAAGAT +
Preference number: 1 (lower is better)
Translates to: LVCFLHTSDIPRPAS*NQAVLFNKYTEGED
Trigger: ATCTTCTCCCTCTGTGTATTTATTGAAGAGAACCGCTTGGTTTCAGGAAGCTGGGCGCGGGATATCCGAAGTGTGGAGGAAACAGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR CCA 90 bp GAACTCTTAGTGGTTTTGATTTGGAGTAGTGTGCGGGTGCTCCAATaGGCAGAAACACGCCAGTTAGTGACTCCAGTGTCCAGAAAGAAT +
Preference number: 1 (lower is better)
Translates to: ELLVVLIWSSVRVLQ*AETRQLVTPVSRKN
Trigger: ATTCTTTCTGGACACTGGAGTCACTAACTGGCGTGTTTCTGCCCATTGGAGCACCCGCACACTACTCCAAATCAAAACCACTAAGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR CCA 90 bp CTTCACATCAGACAAATCAAATTTACAAATTACTTTCCCACCTACTaGACGAAGCGGCCAAAGCCAAAATTGATACACAGGCGCGCGGGC +
Preference number: 1 (lower is better)
Translates to: LHIRQIKFTNYFPTY*TKRPKPKLIHRRAG
Trigger: GCCCGCGCGCCTGTGTATCAATTTTGGCTTTGGCCGCTTCGTCCAGTAGGTGGGAAAGTAATTTGTAAATTTGATTTGTCTGATGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR CAA 90 bp GCGGTGGCGGCGCCTGCAGCTACGGAGCGCTGCATACACGAGGTGTaGCTAGGCGCGGCCAATGGCTCCGGCACCGACACGGACGCGGGC +
Preference number: 2 (lower is better)
Translates to: AVAAPAATERCIHEV*LGAANGSGTDTDAG
Trigger: GCCCGCGTCCGTGTCGGTGCCGGAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCGCTCCGTAGCTGCAGGCGCCGCCACCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CAA 90 bp GCCACCGGGTTCCCACCTAGTCCCGCAGCCGCTGCAGCCGCTGGGTaGGCGGAAGAGCTGGACGCCGAGCTAGAGGACGAGGCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: ATGFPPSPAAAAAAG*AEELDAELEDEAEL
Trigger: CAGCTCTGCCTCGTCCTCTAGCTCGGCGTCCAGCTCTTCCGCCAACCCAGCGGCTGCAGCGGCTGCGGGACTAGGTGGGAACCCGGTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR TCA 90 bp CGTAGGGTAGCCTTGGCCGTAGCTGCCGCCCTGGCCGTAGGACATGGGATAAGACACGGACGCGGGCGCTaGGCCTGGCGAGATGGAGGC +
Preference number: 2 (lower is better)
Translates to: RRVALAVAAALAVGHGIRHGRGR*AWRDGG
Trigger: GCCTCCATCTCGCCAGGCTCAGCGCCCGCGTCCGTG...TCTTATCCCATGTCCTACGGCCAGGGCGGCAGCTACGGCCAAGGCTACCCTACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR CCA 90 bp CGAGGCAGAGCTGGACACAGCTGGCGGCGTGAATTGGCCACTGCTTTCGGAGCCCCGCTCTGCTGCTGCTaGCGGCATTTGGCGCGGCGG +
Preference number: 2 (lower is better)
Translates to: RGRAGHSWRRELATAFGAPLCCC*RHLARR
Trigger: CCGCCGCGCCAAATGCCGCCAGCAGCAGCAGAGCGG...GGCTCCGAAAGCAGTGGCCAATTCACGCCGCCAGCTGTGTCCAGCTCTGCCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CAA 90 bp TGGAACGGACCTGACTATGTACAGCGTTCCCGCCGAGGCGGAAGCTaGAACCAGTCCAGCGCAGGGCGGGGCGGGATGCGGCTCTGTGCG +
Preference number: 2 (lower is better)
Translates to: WNGPDYVQRSRRGGS*NQSSAGRGGMRLCA
Trigger: CGCACAGAGCCGCATCCCGCCCCGCCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGCGGGAACGCTGTACATAGTCAGGTCCGTTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR CAA 90 bp GAGCTCTCCCGCACTGGAGAGGACTTCTTCTTGGCTGGGCGGCTCTaGGTTCCGCTCCCGCTCTGCTGCTGCTGGCGGCATTTGGCGCGG +
Preference number: 2 (lower is better)
Translates to: ELSRTGEDFFLAGRL*VPLPLCCCWRHLAR
Trigger: CCGCGCCAAATGCCGCCAGCAGCAGCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCAAGAAGAAGTCCTCTCCAGTGCGGGAGAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR TCA 90 bp CTGGTGTACTCAGCGACGACGCGGCCGCCACCGGGTTCCCACCTAGTCCCGCAGACACAGCTGGCGGCGTaGATTGGCCACTGCTTTCGG +
Preference number: 2 (lower is better)
Translates to: LVYSATTRPPPGSHLVPQTQLAA*IGHCFR
Trigger: CCGAAAGCAGTGGCCAATTCACGCCGCCAGCTGTGT...CTGCGGGACTAGGTGGGAACCCGGTGGCGGCCGCGTCGTCGCTGAGTACACCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR GCA 90 bp TTCGGAGCCCGAGCTCTCCCGCACTGGAGAGGACTTCTTCTTGGCTGGGCGGCTCCGCTCCCGCTCTGCTaGTGCTGGCGGCATTTGGCG +
Preference number: 2 (lower is better)
Translates to: FGARALPHWRGLLLGWAAPLPLC*CWRHLA
Trigger: CGCCAAATGCCGCCAGCAGCAGCAGAGCGGGAGCGG...AGCCGCCCAGCCAAGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCGGGCTCCGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR CCA 90 bp GGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCCCAGCGCACTCCGCTaGGGCGGAAGAAACGCCGGG +
Preference number: 2 (lower is better)
Translates to: GAAAATGSGPRRAQVVAFPSALR*GGRNAG
Trigger: CCCGGCGTTTCTTCCGCCCCAGCGGAGTGCGCTGGG...AAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CCA 90 bp GAGGCAGCTGGTGTACTCAGCGACGACGCGGCCGCCACCGGGTTCCCACCTAGTGCTGGCGGCGTGAATTaGCCACTGCTTTCGGAGCCC +
Preference number: 2 (lower is better)
Translates to: EAAGVLSDDAAATGFPPSAGGVN*PLLSEP
Trigger: GGGCTCCGAAAGCAGTGGCCAATTCACGCCGCCAGC...ACTAGGTGGGAACCCGGTGGCGGCCGCGTCGTCGCTGAGTACACCAGCTGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CAA 90 bp CTGCTTTCGGAGCCCGAGCTCTCCCGCACTGGAGAGGACTTCTTCTaGGCTGGGCGGCTCTTGGTTCCGCTCCCGCTCTGCTGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: LLSEPELSRTGEDFF*AGRLLVPLPLCCCW
Trigger: CCAGCAGCAGCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCAAGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCGGGCTCCGAAAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR TCA 90 bp GGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTGCCGAGGCGGAAGCTTaGACCAGTCCAGCGCAGGGC +
Preference number: 2 (lower is better)
Translates to: GAAAATGSGPRRAQVVAFAEAEA*TSPAQG
Trigger: GCCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGC...AAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR GCA 90 bp ACAGTCGGGGGAGTTGAAGTTGAGTTTCCAGGCGGAGGAAGCAGCAGCGGCGCCCTCCCGCTCTGCTGCTaGTGGCGGCATTTGGCGCGG +
Preference number: 2 (lower is better)
Translates to: TVGGVEVEFPGGGSSSGALPLCC*WRHLAR
Trigger: CCGCGCCAAATGCCGCCAGCAGCAGCAGAGCGGGAG...GGCGCCGCTGCTGCTTCCTCCGCCTGGAAACTCAACTTCAACTCCCCCGACTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR CCA 90 bp GGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTAACGCCGGGAGGCTCTaGCCGGCAGGCGTGGAGCAA +
Preference number: 2 (lower is better)
Translates to: GAAAATGSGPRRAQVVAFNAGRL*PAGVEQ
Trigger: TTGCTCCACGCCTGCCGGCCAGAGCCTCCCGGCGTT...AAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR CAA 90 bp CGAGCTAGAGGACGAGGCAGAGCTGGACACAGCTGGCGGCGTGAATaGGCCACTGCTTTCGGAGCCCGAGCTCTCCCGCACTGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: RARGRGRAGHSWRRE*ATAFGARALPHWRG
Trigger: TCCTCTCCAGTGCGGGAGAGCTCGGGCTCCGAAAGCAGTGGCCAATTCACGCCGCCAGCTGTGTCCAGCTCTGCCTCGTCCTCTAGCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CAA 90 bp GCAGTCCACGCCGCCAAAGTAGGAAGAGGAGGGCGTAGGGTAGCCTaGGCCGTAGCTGCCGCCCTGGCCGTAGGACATGGGATAAGAGGC +
Preference number: 2 (lower is better)
Translates to: AVHAAKVGRGGRRVA*AVAAALAVGHGIRG
Trigger: GCCTCTTATCCCATGTCCTACGGCCAGGGCGGCAGCTACGGCCAAGGCTACCCTACGCCCTCCTCTTCCTACTTTGGCGGCGTGGACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR CCA 90 bp GGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTTGGCTGGGCGGCTCTTaGTTCCGCTCCCGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: GAAAATGSGPRRAQVVAFWLGGS*FRSRSA
Trigger: AGCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCA...AAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR CCA 90 bp GAGCTGGACGCCGAGCTAGAGGACGAGGCAGAGCTGGACACAGCTGGCGGCGTGCGAGCTCTCCCGCACTaGAGAGGACTTCTTCTTGGC +
Preference number: 2 (lower is better)
Translates to: ELDAELEDEAELDTAGGVRALPH*RGLLLG
Trigger: GCCAAGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCG...CACGCCGCCAGCTGTGTCCAGCTCTGCCTCGTCCTCTAGCTCGGCGTCCAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR GCA 90 bp TCAGTTTTGGAGAAGACGAGGCAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATCGGGATGCGGCTCTGTaGGCGGAAGGCTGGGGACGC +
Preference number: 2 (lower is better)
Translates to: SVLEKTRQRRAVQQQQQDRDAAL*AEGWGR
Trigger: GCGTCCCCAGCCTTCCGCGCACAGAGCCGCATCCCG...ATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTGCCTCGTCTTCTCCAAAACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CCA 90 bp GCGGAAGAAACGCCGGGAGGCTCTGGCCGGCAGGCGTGGAGCAAAATCGAGGGCCAAGTGGCACAAAAATaGGGGCGGCAGTGCAGGCAA +
Preference number: 2 (lower is better)
Translates to: AEETPGGSGRQAWSKIEGQVAQK*GRQCRQ
Trigger: TTGCCTGCACTGCCGCCCCCATTTTTGTGCCACTTG...GCCCTCGATTTTGCTCCACGCCTGCCGGCCAGAGCCTCCCGGCGTTTCTTCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CCA 90 bp ACAGCGTTCCCGCCGAGGCGGAAGCTTGAACCAGTCCAGCGCAGGGCGGGGCGGGCTGTCCAGAAAGACTaGAAGGGGAGGCTTAAGAGT +
Preference number: 2 (lower is better)
Translates to: TAFPPRRKLEPVQRRAGRAVQKD*KGRLKS
Trigger: ACTCTTAAGCCTCCCCTTCCAGTCTTTCTGGACAGC...CCGCCCCGCCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGCGGGAACGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CCA 90 bp CTCCAGATAGATGAGGCAGCTGGTGTACTCAGCGACGACGCGGCCGCCACCGGGGGACTTCTTCTTGGCTaGGCGGCTCTTGGTTCCGCT +
Preference number: 2 (lower is better)
Translates to: LQIDEAAGVLSDDAAATGGLLLG*AALGSA
Trigger: AGCGGAACCAAGAGCCGCCCAGCCAAGAAGAAGTCC...CCCGGTGGCGGCCGCGTCGTCGCTGAGTACACCAGCTGCCTCATCTATCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR TCA 90 bp GGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTAAAATCGAGGGCAGCTaGAGGGGCAGCAGTCTGCGC +
Preference number: 2 (lower is better)
Translates to: GAAAATGSGPRRAQVVAFKIEGS*RGSSLR
Trigger: GCGCAGACTGCTGCCCCTTCAGCTGCCCTCGATTTT...AAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR GCA 90 bp TACTGGACGAAGCGGCCAAAGCCAAAATTGATACACAGGCGCGCGGGCTCTCCGTCAGCCCTGCGCCCCTaGCCAACCCCCACCTCTGTA +
Preference number: 2 (lower is better)
Translates to: YWTKRPKPKLIHRRAGSPSALRP*PTPTSV
Trigger: TACAGAGGTGGGGGTTGGGCAGGGGCGCAGGGCTGA...CGGAGAGCCCGCGCGCCTGTGTATCAATTTTGGCTTTGGCCGCTTCGTCCAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CCA 90 bp CGCTGCATACACGAGGTGTTGCTAGGCGCGGCCAATGGCTCCGGCACCGACACGCAAGTGGCACAAAAATaGGGGCGGCAGTGCAGGCAA +
Preference number: 2 (lower is better)
Translates to: RCIHEVLLGAANGSGTDTQVAQK*GRQCRQ
Trigger: TTGCCTGCACTGCCGCCCCCATTTTTGTGCCACTTG...CGTGTCGGTGCCGGAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR CCA 90 bp TCAGTTTTGGAGAAGACGAGGCAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATCTGCAGCCGCTGGGTTaGCGGAAGAGCTGGACGCCG +
Preference number: 2 (lower is better)
Translates to: SVLEKTRQRRAVQQQQQDLQPLG*RKSWTP
Trigger: CGGCGTCCAGCTCTTCCGCCAACCCAGCGGCTGCAG...ATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTGCCTCGTCTTCTCCAAAACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR GCA 90 bp AGTGTTGGGCTCAAACAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTGCAAGTGGGCAAAGGCGGGCGGTaGAGCAGCAGCAACAGGATC +
Preference number: 2 (lower is better)
Translates to: SVGLKQRIRAQSLRRLQVGKGGR*SSSNRI
Trigger: GATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTGCC...CACTTGCAGCCTTCGGAGGCTCTGCGCTCTGATCCGCTGTTTGAGCCCAACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CCA 90 bp CTCCTCTTTCATTCCTGGGCTCACAAGACCTGGAACCGCCATGAGGCTTGGTCCAGCCGCTGCAGCCGCTaGGTTGGCGGAAGAGCTGGA +
Preference number: 2 (lower is better)
Translates to: LLFHSWAHKTWNRHEAWSSRCSR*VGGRAG
Trigger: TCCAGCTCTTCCGCCAACCCAGCGGCTGCAGCGGCT...GGACCAAGCCTCATGGCGGTTCCAGGTCTTGTGAGCCCAGGAATGAAAGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR TCA 90 bp AACCCCCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCGCCGAGGCGGAAGCTTaGACCAGTCCAGCGCAGGGC +
Preference number: 2 (lower is better)
Translates to: NPHLCTLTCLFPPHFGYPAEAEA*TSPAQG
Trigger: GCCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGC...GGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGGGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CCA 90 bp AACCCCCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCAACGCCGGGAGGCTCTaGCCGGCAGGCGTGGAGCAA +
Preference number: 2 (lower is better)
Translates to: NPHLCTLTCLFPPHFGYPNAGRL*PAGVEQ
Trigger: TTGCTCCACGCCTGCCGGCCAGAGCCTCCCGGCGTT...GGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGGGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CCA 90 bp TGCAGCTACGGAGCGCTGCATACACGAGGTGTTGCTAGGCGCGGCCAATGGCTCGAGAGGACTTCTTCTTaGCTGGGCGGCTCTTGGTTC +
Preference number: 2 (lower is better)
Translates to: CSYGALHTRGVARRGQWLERTSS*LGGSWF
Trigger: GAACCAAGAGCCGCCCAGCCAAGAAGAAGTCCTCTC...GAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCGCTCCGTAGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR CCA 90 bp GGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTGGTGATGTGAGTGCATaGGCGCTAGGTATGAGCTGC +
Preference number: 2 (lower is better)
Translates to: GAAAATGSGPRRAQVVAFGDVSA*ALGMSC
Trigger: GCAGCTCATACCTAGCGCCCATGCACTCACATCACC...AAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR GCA 90 bp TACTGGACGAAGCGGCCAAAGCCAAAATTGATACACAGGCGCGCGGGCTCTCCGGAAGGGGCAGCAGTCTaGGCGGGAGGAACTCTTAGT +
Preference number: 2 (lower is better)
Translates to: YWTKRPKPKLIHRRAGSPEGAAV*AGGTLS
Trigger: ACTAAGAGTTCCTCCCGCGCAGACTGCTGCCCCTTC...CGGAGAGCCCGCGCGCCTGTGTATCAATTTTGGCTTTGGCCGCTTCGTCCAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CCA 90 bp TCAGTTTTGGAGAAGACGAGGCAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATCCTGGCCGTAGGACATaGGATAAGAGGCTGCTGCGG +
Preference number: 2 (lower is better)
Translates to: SVLEKTRQRRAVQQQQQDPGRRT*DKRLLR
Trigger: CCGCAGCAGCCTCTTATCCCATGTCCTACGGCCAGG...ATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTGCCTCGTCTTCTCCAAAACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR GCA 90 bp GCCACTGCTTTCGGAGCCCGAGCTCTCCCGCACTGGAGAGGACTTCTTCTTGGCGAGGGCGCAGGTAGTTaGGTTTCTTCTCCTCTTTCA +
Preference number: 2 (lower is better)
Translates to: ATAFGARALPHWRGLLLGEGAGS*VSSPLS
Trigger: TGAAAGAGGAGAAGAAACGCAACTACCTGCGCCCTC...GCCAAGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCGGGCTCCGAAAGCAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR GCA 90 bp GGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTAAATGGGGGCGGCAGTaGAGGCAATGGACATCTTTT +
Preference number: 2 (lower is better)
Translates to: GAAAATGSGPRRAQVVAFKWGRQ*RQWTSF
Trigger: AAAAGATGTCCATTGCCTGCACTGCCGCCCCCATTT...AAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
3UTR CAA 90 bp CAGCTGAAGGGGCAGCAGTCTGCGCGGGAGGAACTCTTAGTGGTTTaGATTTGGAGTAGTGTGCGGGTGCTCCAATGGGCAGAAACACGC +
Preference number: 2 (lower is better)
Translates to: QLKGQQSAREELLVV*IWSSVRVLQWAETR
Trigger: GCGTGTTTCTGCCCATTGGAGCACCCGCACACTACTCCAAATCAAAACCACTAAGAGTTCCTCCCGCGCAGACTGCTGCCCCTTCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR GCA 90 bp CCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCGCGCCGGAGTAGTGTGCGGGTaGTCCAATGGGCAGAAACAC +
Preference number: 2 (lower is better)
Translates to: PPLYPDLSVSSTLRISRAGVVCG*SNGQKH
Trigger: GTGTTTCTGCCCATTGGAGCACCCGCACACTACTCC...GGCGCGGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR GCA 90 bp GCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTGCACTAAAAACTCACTAGAAGGGGCAGCAGTCTaGGCGGGAGGAACTCTTAGT +
Preference number: 2 (lower is better)
Translates to: ARGLSADFGERRCTKNSLEGAAV*AGGTLS
Trigger: ACTAAGAGTTCCTCCCGCGCAGACTGCTGCCCCTTC...TAGTGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CCA 90 bp CCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCGCGCCCAAGTGGCACAAAAATaGGGGCGGCAGTGCAGGCAA +
Preference number: 2 (lower is better)
Translates to: PPLYPDLSVSSTLRISRAQVAQK*GRQCRQ
Trigger: TTGCCTGCACTGCCGCCCCCATTTTTGTGCCACTTG...GGCGCGGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CCA 90 bp AGTGTTGGGCTCAAACAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTGCAAGTGGCTGTCCAGAAAGACTaGAAGGGGAGGCTTAAGAGT +
Preference number: 2 (lower is better)
Translates to: SVGLKQRIRAQSLRRLQVAVQKD*KGRLKS
Trigger: ACTCTTAAGCCTCCCCTTCCAGTCTTTCTGGACAGC...CACTTGCAGCCTTCGGAGGCTCTGCGCTCTGATCCGCTGTTTGAGCCCAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CCA 90 bp GGAAGTAATGTAGATAAAGAGGAGGAGGGGGACTGCCTTACATTTCAACAAGTACTGTGCGCGGAAGGCTaGGGACGCGCTCCTCCGGCG +
Preference number: 2 (lower is better)
Translates to: GSNVDKEEEGDCLTFQQVLCAEG*GRAPPA
Trigger: CGCCGGAGGAGCGCGTCCCCAGCCTTCCGCGCACAG...TACTTGTTGAAATGTAAGGCAGTCCCCCTCCTCCTCTTTATCTACATTACTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR GCA 90 bp GGGGAAATAATACATCTCTCCTGTATAGAATGTGTAGGCCAAGCCGAAGCACCGGGCAAAGGCGGGCGGTaGAGCAGCAGCAACAGGATC +
Preference number: 2 (lower is better)
Translates to: GEIIHLSCIECVGQAEAPGKGGR*SSSNRI
Trigger: GATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTGCC...CGGTGCTTCGGCTTGGCCTACACATTCTATACAGGAGAGATGTATTATTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CCA 90 bp AACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTGGAACGGACCTGACTATGTACCCAGCGCACTCCGCTaGGGCGGAAGAAACGCCGGG +
Preference number: 2 (lower is better)
Translates to: NQQQLKSLSGPWNGPDYVPSALR*GGRNAG
Trigger: CCCGGCGTTTCTTCCGCCCCAGCGGAGTGCGCTGGG...TACATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR GCA 90 bp GCTGAAGGGGCAGCAGTCTGCGCGGGAGGAACTCTTAGTGGTTTTGATTTGGAGAGAGCCTCCGAAGGCTaGAAGTGCTTAATAGCTGTC +
Preference number: 2 (lower is better)
Translates to: AEGAAVCAGGTLSGFDLERASEG*KCLIAV
Trigger: GACAGCTATTAAGCACTTGCAGCCTTCGGAGGCTCT...CTCCAAATCAAAACCACTAAGAGTTCCTCCCGCGCAGACTGCTGCCCCTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR CAA 90 bp ACAAATTACTTTCCCACCTACTGGACGAAGCGGCCAAAGCCAAAATaGATACACAGGCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAA +
Preference number: 2 (lower is better)
Translates to: TNYFPTYWTKRPKPK*IHRRAGSPQISENE
Trigger: TTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGCCTGTGTATCAATTTTGGCTTTGGCCGCTTCGTCCAGTAGGTGGGAAAGTAATTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR TCA 90 bp AACCCCCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCAAAAGCGCCATTGATTaGGGAAGAGCAGAAGGGGGA +
Preference number: 2 (lower is better)
Translates to: NPHLCTLTCLFPPHFGYPKSAID*GRAEGG
Trigger: TCCCCCTTCTGCTCTTCCTCAATCAATGGCGCTTTT...GGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGGGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CCA 90 bp GCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTGCACTAAAAACTCACTAAGTTTAAGTGGTCCCTaGAACGGACCTGACTATGTA +
Preference number: 2 (lower is better)
Translates to: ARGLSADFGERRCTKNSLSLSGP*NGPDYV
Trigger: TACATAGTCAGGTCCGTTCCAGGGACCACTTAAACT...TAGTGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR TCA 90 bp AACCCCCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCAAGAAAAAGCGCCATTaGTTGAGGAAGAGCAGAAGG +
Preference number: 2 (lower is better)
Translates to: NPHLCTLTCLFPPHFGYPKKKRH*LRKSRR
Trigger: CCTTCTGCTCTTCCTCAATCAATGGCGCTTTTTCTT...GGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGGGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR GCA 90 bp GAACGAAGGTGCACTAAAAACTCACTAGACAAAACAAGGGTGTTGAAAGAGAGAGGAACTGCGACCCTGTaGTTAGACCGGGTGAGGGGG +
Preference number: 2 (lower is better)
Translates to: ERRCTKNSLDKTRVLKERGTATL*LDRVRG
Trigger: CCCCCTCACCCGGTCTAAGCACAGGGTCGCAGTTCC...TCTCTCTTTCAACACCCTTGTTTTGTCTAGTGAGTTTTTAGTGCACCTTCGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CCA 90 bp AACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTGGAACGGACCTGACTATGTAGTGCGGGTGCTCCAATaGGCAGAAACACGCCAGTTA +
Preference number: 2 (lower is better)
Translates to: NQQQLKSLSGPWNGPDYVVRVLQ*AETRQL
Trigger: TAACTGGCGTGTTTCTGCCCATTGGAGCACCCGCAC...TACATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CCA 90 bp GGAAGTAATGTAGATAAAGAGGAGGAGGGGGACTGCCTTACATTTCAACAAGTAGTGCGGGTGCTCCAATaGGCAGAAACACGCCAGTTA +
Preference number: 2 (lower is better)
Translates to: GSNVDKEEEGDCLTFQQVVRVLQ*AETRQL
Trigger: TAACTGGCGTGTTTCTGCCCATTGGAGCACCCGCAC...TACTTGTTGAAATGTAAGGCAGTCCCCCTCCTCCTCTTTATCTACATTACTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR GCA 90 bp ACCAACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTGGAACGGACCTGACTATAAATGGGGGCGGCAGTaGAGGCAATGGACATCTTTT +
Preference number: 2 (lower is better)
Translates to: TNQQQLKSLSGPWNGPDYKWGRQ*RQWTSF
Trigger: AAAAGATGTCCATTGCCTGCACTGCCGCCCCCATTT...ATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CCA 90 bp GGAAGTAATGTAGATAAAGAGGAGGAGGGGGACTGCCTTACATTTCAACAAGTATACTTTCCCACCTACTaGACGAAGCGGCCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: GSNVDKEEEGDCLTFQQVYFPTY*TKRPKP
Trigger: TGGCTTTGGCCGCTTCGTCCAGTAGGTGGGAAAGTA...TACTTGTTGAAATGTAAGGCAGTCCCCCTCCTCCTCTTTATCTACATTACTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR GCA 90 bp AACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTGGAACGGACCTGACTATGTAGAGGGCGCAGGTAGTTaGGTTTCTTCTCCTCTTTCA +
Preference number: 2 (lower is better)
Translates to: NQQQLKSLSGPWNGPDYVEGAGS*VSSPLS
Trigger: TGAAAGAGGAGAAGAAACGCAACTACCTGCGCCCTC...TACATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR GCA 90 bp GGAAGTAATGTAGATAAAGAGGAGGAGGGGGACTGCCTTACATTTCAACAAGTATTTGTAAACTGGAACTaGGACCCTGTGCTTAGACCG +
Preference number: 2 (lower is better)
Translates to: GSNVDKEEEGDCLTFQQVFVNWN*DPVLRP
Trigger: CGGTCTAAGCACAGGGTCGCAGTTCCAGTTTACAAA...TACTTGTTGAAATGTAAGGCAGTCCCCCTCCTCCTCTTTATCTACATTACTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR GCA 90 bp AACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTGGAACGGACCTGACTATGTATCCGAAGGCTGCAAGTaGTTAATAGCTGTCCAGAAA +
Preference number: 2 (lower is better)
Translates to: NQQQLKSLSGPWNGPDYVSEGCK*LIAVQK
Trigger: TTTCTGGACAGCTATTAAGCACTTGCAGCCTTCGGA...TACATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR GCA 90 bp GTGCTAAGACAAGATATGTTCAGTTCAACCAACCAACAGCAACTAAAAAGTTTAGAGGGCGCAGGTAGTTaGGTTTCTTCTCCTCTTTCA +
Preference number: 2 (lower is better)
Translates to: VLRQDMFSSTNQQQLKSLEGAGS*VSSPLS
Trigger: TGAAAGAGGAGAAGAAACGCAACTACCTGCGCCCTC...TAAACTTTTTAGTTGCTGTTGGTTGGTTGAACTGAACATATCTTGTCTTAGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR GCA 72 bp CCAGTCCAGCGCAGGGCGGGGCGGGATGCGGCTCTGTaGGCGGAAGGCTGGGGACGCGCTCCTCCGGCGGGC +
Preference number: 3 (lower is better)
Translates to: PVQRRAGRDAAL*AEGWGRAPPAG
Trigger: GCCCGCCGGAGGAGCGCGTCCCCAGCCTTCCGCGCACAGAGCCGCATCCCGCCCCGCCCTGCGCTGGACTGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR CCA 72 bp AGGGCGGGGCGGGATGCGGCTCTGTGCGCGGAAGGCTaGGGACGCGCTCCTCCGGCGGGCCTAGCCCTGGCG +
Preference number: 3 (lower is better)
Translates to: RAGRDAALCAEG*GRAPPAGLALA
Trigger: CGCCAGGGCTAGGCCCGCCGGAGGAGCGCGTCCCCAGCCTTCCGCGCACAGAGCCGCATCCCGCCCCGCCCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR GCA 72 bp GCTGCTGCGGTGGCGGCGCCTGCAGCTACGGAGCGCTaGATACACGAGGTGTTGCTAGGCGCGGCCAATGGC +
Preference number: 3 (lower is better)
Translates to: AAAVAAPAATER*IHEVLLGAANG
Trigger: GCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCGCTCCGTAGCTGCAGGCGCCGCCACCGCAGCAGC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CCA 72 bp GCACTCCGCTGGGGCGGAAGAAACGCCGGGAGGCTCTaGCCGGCAGGCGTGGAGCAAAATCGAGGGCAGCTG +
Preference number: 3 (lower is better)
Translates to: ALRWGGRNAGRL*PAGVEQNRGQL
Trigger: CAGCTGCCCTCGATTTTGCTCCACGCCTGCCGGCCAGAGCCTCCCGGCGTTTCTTCCGCCCCAGCGGAGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR CCA 72 bp AGCCTTGGCCGTAGCTGCCGCCCTGGCCGTAGGACATaGGATAAGAGGCTGCTGCGGTGGCGGCGCCTGCAG +
Preference number: 3 (lower is better)
Translates to: SLGRSCRPGRRT*DKRLLRWRRLQ
Trigger: CTGCAGGCGCCGCCACCGCAGCAGCCTCTTATCCCATGTCCTACGGCCAGGGCGGCAGCTACGGCCAAGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR TCA 72 bp CTGACTATGTACAGCGTTCCCGCCGAGGCGGAAGCTTaGACCAGTCCAGCGCAGGGCGGGGCGGGATGCGGC +
Preference number: 3 (lower is better)
Translates to: LTMYSVPAEAEA*TSPAQGGAGCG
Trigger: GCCGCATCCCGCCCCGCCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGCGGGAACGCTGTACATAGTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR TCA 72 bp GATGGTGGCCCGCCATGGAGGAGGGTGCCATGGGGCTaGGCTGGTGCGGGTGGTGATGTGAGTGCATGGGCG +
Preference number: 3 (lower is better)
Translates to: DGGPPWRRVPWG*AGAGGDVSAWA
Trigger: CGCCCATGCACTCACATCACCACCCGCACCAGCTCAGCCCCATGGCACCCTCCTCCATGGCGGGCCACCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR CAA 90 bp CTGGTGTACTCAGCGACGACGCGGCCGCCACCGGGTTCCCACCTAGTCCCGCAGCTAGACTCCGGCAGGTaGATCTTGAGCGCCACCTCC +
Preference number: 3 (lower is better)
Translates to: LVYSATTRPPPGSHLVPQLDSGR*ILSATS
Trigger: GGAGGTGGCGCTCAAGATCAACCTGCCGGAGTCTAG...CTGCGGGACTAGGTGGGAACCCGGTGGCGGCCGCGTCGTCGCTGAGTACACCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR CAA 90 bp GGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTTTGGCTGGGCGGCTCTaGGTTCCGCTCCCGCTCTGC +
Preference number: 3 (lower is better)
Translates to: GAAAATGSGPRRAQVVAFLAGRL*VPLPLC
Trigger: GCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCAA...AAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CCA 72 bp CGAGCTCTCCCGCACTGGAGAGGACTTCTTCTTGGCTaGGCGGCTCTTGGTTCCGCTCCCGCTCTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: RALPHWRGLLLG*AALGSAPALLL
Trigger: CAGCAGCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCAAGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CCA 72 bp AGCCCGAGCTCTCCCGCACTGGAGAGGACTTCTTCTTaGCTGGGCGGCTCTTGGTTCCGCTCCCGCTCTGCT +
Preference number: 3 (lower is better)
Translates to: SPSSPALERTSS*LGGSWFRSRSA
Trigger: AGCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCAAGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCGGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CCA 72 bp GACGAGGCAGAGCTGGACACAGCTGGCGGCGTGAATTaGCCACTGCTTTCGGAGCCCGAGCTCTCCCGCACT +
Preference number: 3 (lower is better)
Translates to: DEAELDTAGGVN*PLLSEPELSRT
Trigger: AGTGCGGGAGAGCTCGGGCTCCGAAAGCAGTGGCCAATTCACGCCGCCAGCTGTGTCCAGCTCTGCCTCGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CCA 72 bp CGCCGAGCTAGAGGACGAGGCAGAGCTGGACACAGCTaGCGGCGTGAATTGGCCACTGCTTTCGGAGCCCGA +
Preference number: 3 (lower is better)
Translates to: RRARGRGRAGHS*RRELATAFGAR
Trigger: TCGGGCTCCGAAAGCAGTGGCCAATTCACGCCGCCAGCTGTGTCCAGCTCTGCCTCGTCCTCTAGCTCGGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR TCA 72 bp TTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGCCTaGGGACTGGCTCAACGGGTGGTGCGCATGTGGGTG +
Preference number: 3 (lower is better)
Translates to: LVVVVVMVVVVA*GLAQRVVRMWV
Trigger: CACCCACATGCGCACCACCCGTTGAGCCAGTCCTCAGGCCACCACCACCACCATCACCACCACCACCACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR GCA 72 bp GGACATGGGATAAGAGGCTGCTGCGGTGGCGGCGCCTaGAGCTACGGAGCGCTGCATACACGAGGTGTTGCT +
Preference number: 3 (lower is better)
Translates to: GHGIRGCCGGGA*SYGALHTRGVA
Trigger: AGCAACACCTCGTGTATGCAGCGCTCCGTAGCTGCAGGCGCCGCCACCGCAGCAGCCTCTTATCCCATGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR CAA 90 bp CTTGGCCGTAGCTGCCGCCCTGGCCGTAGGACATGGGATAAGAGGCTGCTGCGGGGAGAGGACTTCTTCTaGGCTGGGCGGCTCTTGGTT +
Preference number: 3 (lower is better)
Translates to: LGRSCRPGRRTWDKRLLRGEDFF*AGRLLV
Trigger: AACCAAGAGCCGCCCAGCCAAGAAGAAGTCCTCTCC...CCGCAGCAGCCTCTTATCCCATGTCCTACGGCCAGGGCGGCAGCTACGGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR CAA 90 bp AGGCAAGCCCAGAGCCACCGTAGCCTTGGTGGTGGTGGTGGTGATGGTGGTGGTAGCTGGCGGCGTGAATaGGCCACTGCTTTCGGAGCC +
Preference number: 3 (lower is better)
Translates to: RQAQSHRSLGGGGGDGGGSWRRE*ATAFGA
Trigger: GGCTCCGAAAGCAGTGGCCAATTCACGCCGCCAGCT...ACCACCACCATCACCACCACCACCACCAAGGCTACGGTGGCTCTGGGCTTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR CAA 90 bp TCAGTTTTGGAGAAGACGAGGCAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATGCTGCAGCCGCTGGGTaGGCGGAAGAGCTGGACGCC +
Preference number: 3 (lower is better)
Translates to: SVLEKTRQRRAVQQQQQDAAAAG*AEELDA
Trigger: GGCGTCCAGCTCTTCCGCCAACCCAGCGGCTGCAGC...ATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTGCCTCGTCTTCTCCAAAACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR CAA 90 bp AGGCAAGCCCAGAGCCACCGTAGCCTTGGTGGTGGTGGTGGTGATGGTGGTGGTTGCATACACGAGGTGTaGCTAGGCGCGGCCAATGGC +
Preference number: 3 (lower is better)
Translates to: RQAQSHRSLGGGGGDGGGCIHEV*LGAANG
Trigger: GCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCA...ACCACCACCATCACCACCACCACCACCAAGGCTACGGTGGCTCTGGGCTTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CCA 72 bp TTGGCCACTGCTTTCGGAGCCCGAGCTCTCCCGCACTaGAGAGGACTTCTTCTTGGCTGGGCGGCTCTTGGT +
Preference number: 3 (lower is better)
Translates to: LATAFGARALPH*RGLLLGWAALG
Trigger: ACCAAGAGCCGCCCAGCCAAGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCGGGCTCCGAAAGCAGTGGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR TCA 72 bp CGCCAGGCTCCTTGTAATCCAAGCAGTCGGCAGAGTTaGAGGCAAGCCCAGAGCCACCGTAGCCTTGGTGGT +
Preference number: 3 (lower is better)
Translates to: RQAPCNPSSRQS*RQAQSHRSLGG
Trigger: ACCACCAAGGCTACGGTGGCTCTGGGCTTGCCTTCAACTCTGCCGACTGCTTGGATTACAAGGAGCCTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR TCA 72 bp TTCCCACCTACTGGACGAAGCGGCCAAAGCCAAAATTaGTACACAGGCGCGCGGGCTCTCCGCAGATTTCGG +
Preference number: 3 (lower is better)
Translates to: FPPTGRSGQSQN*YTGARALRRFR
Trigger: CCGAAATCTGCGGAGAGCCCGCGCGCCTGTGTATCAATTTTGGCTTTGGCCGCTTCGTCCAGTAGGTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR GCA 72 bp AGCGGATCAGAGCGCAGAGCCTCCGAAGGCTGCAAGTaGTTAATAGCTGTCCAGAAAGACTGGAAGGGGAGG +
Preference number: 3 (lower is better)
Translates to: SGSERRASEGCK*LIAVQKDWKGR
Trigger: CCTCCCCTTCCAGTCTTTCTGGACAGCTATTAAGCACTTGCAGCCTTCGGAGGCTCTGCGCTCTGATCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR TCA 72 bp CTTTCATTCCTGGGCTCACAAGACCTGGAACCGCCATaGGGCTTGGTCCTTATAGTCCAGACAGTCGGGGGA +
Preference number: 3 (lower is better)
Translates to: LSFLGSQDLEPP*GLVLIVQTVGG
Trigger: TCCCCCGACTGTCTGGACTATAAGGACCAAGCCTCATGGCGGTTCCAGGTCTTGTGAGCCCAGGAATGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CCA 72 bp GCGCAGGTAGTTGCGTTTCTTCTCCTCTTTCATTCCTaGGCTCACAAGACCTGGAACCGCCATGAGGCTTGG +
Preference number: 3 (lower is better)
Translates to: AQVVAFLLLFHS*AHKTWNRHEAW
Trigger: CCAAGCCTCATGGCGGTTCCAGGTCTTGTGAGCCCAGGAATGAAAGAGGAGAAGAAACGCAACTACCTGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR TCA 72 bp GCAACTAAAAAGTTTAAGTGGTCCCTGGAACGGACCTaGCTATGTACAGCGTTCCCGCCGAGGCGGAAGCTT +
Preference number: 3 (lower is better)
Translates to: ATKKFKWSLERT*LCTAFPPRRKL
Trigger: AAGCTTCCGCCTCGGCGGGAACGCTGTACATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR GCA 72 bp GCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTaGACTAAAAACTCACTAGACAAAACAAGGGTGTTG +
Preference number: 3 (lower is better)
Translates to: ARGLSADFGERR*TKNSLDKTRVL
Trigger: CAACACCCTTGTTTTGTCTAGTGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR CCA 72 bp GTGGTTTTGATTTGGAGTAGTGTGCGGGTGCTCCAATaGGCAGAAACACGCCAGTTAGTGACTCCAGTGTCC +
Preference number: 3 (lower is better)
Translates to: VVLIWSSVRVLQ*AETRQLVTPVS
Trigger: GGACACTGGAGTCACTAACTGGCGTGTTTCTGCCCATTGGAGCACCCGCACACTACTCCAAATCAAAACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR CCA 72 bp CAGTCTGCGCGGGAGGAACTCTTAGTGGTTTTGATTTaGAGTAGTGTGCGGGTGCTCCAATGGGCAGAAACA +
Preference number: 3 (lower is better)
Translates to: QSAREELLVVLI*SSVRVLQWAET
Trigger: TGTTTCTGCCCATTGGAGCACCCGCACACTACTCCAAATCAAAACCACTAAGAGTTCCTCCCGCGCAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CAA 90 bp CCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCGCGCCGGTGAAAATTCAGTTTaGGAGAAGACGAGGCAAAGG +
Preference number: 3 (lower is better)
Translates to: PPLYPDLSVSSTLRISRAGENSV*EKTRQR
Trigger: CCTTTGCCTCGTCTTCTCCAAAACTGAATTTTCACC...GGCGCGGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CAA 90 bp AGACCTGGAACCGCCATGAGGCTTGGTCCTTATAGTCCAGACAGTCGGGGGAGTGGTGAAAATTCAGTTTaGGAGAAGACGAGGCAAAGG +
Preference number: 3 (lower is better)
Translates to: RPGTAMRLGPYSPDSRGSGENSV*EKTRQR
Trigger: CCTTTGCCTCGTCTTCTCCAAAACTGAATTTTCACC...ACTCCCCCGACTGTCTGGACTATAAGGACCAAGCCTCATGGCGGTTCCAGGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR-3UTR CAA 90 bp CAGGCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTGCACTAAAAACTCAGAACTCTTAGTGGTTTaGATTTGGAGTAGTGTGCGG +
Preference number: 3 (lower is better)
Translates to: QARGLSADFGERRCTKNSELLVV*IWSSVR
Trigger: CCGCACACTACTCCAAATCAAAACCACTAAGAGTTC...TGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR TCA 72 bp TTCCTCCACACTTCGGATATCCCGCGCCCAGCTTCCTaGAACCAAGCGGTTCTCTTCAATAAATACACAGAG +
Preference number: 3 (lower is better)
Translates to: FLHTSDIPRPAS*NQAVLFNKYTE
Trigger: CTCTGTGTATTTATTGAAGAGAACCGCTTGGTTTCAGGAAGCTGGGCGCGGGATATCCGAAGTGTGGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR CCA 72 bp ACCAACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTaGAACGGACCTGACTATGTACAGCGTTCCCGCCGA +
Preference number: 3 (lower is better)
Translates to: TNQQQLKSLSGP*NGPDYVQRSRR
Trigger: TCGGCGGGAACGCTGTACATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CAA 90 bp ACAAATCAAATTTACAAATTACTTTCCCACCTACTGGACGAAGCGGCCAAAGCCAAGCCGACAGAGGAGTaGGAACTGGGTTTGGGGCCT +
Preference number: 3 (lower is better)
Translates to: TNQIYKLLSHLLDEAAKAKPTEE*ELGLGP
Trigger: AGGCCCCAAACCCAGTTCCAACTCCTCTGTCGGCTT...GGCTTTGGCCGCTTCGTCCAGTAGGTGGGAAAGTAATTTGTAAATTTGATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR-3UTR CAA 90 bp GGAAGTAATGTAGATAAAGAGGAGGAGGGGGACTGCCTTACATTTCAACAAGTAGGTGAAAATTCAGTTTaGGAGAAGACGAGGCAAAGG +
Preference number: 3 (lower is better)
Translates to: GSNVDKEEEGDCLTFQQVGENSV*EKTRQR
Trigger: CCTTTGCCTCGTCTTCTCCAAAACTGAATTTTCACC...TACTTGTTGAAATGTAAGGCAGTCCCCCTCCTCCTCTTTATCTACATTACTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR CCA 72 bp AGACAAATCAAATTTACAAATTACTTTCCCACCTACTaGACGAAGCGGCCAAAGCCAAAATTGATACACAGG +
Preference number: 3 (lower is better)
Translates to: RQIKFTNYFPTY*TKRPKPKLIHR
Trigger: CCTGTGTATCAATTTTGGCTTTGGCCGCTTCGTCCAGTAGGTGGGAAAGTAATTTGTAAATTTGATTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp ACAGCGTTCCCGCCGAGGCGGAAGCTTGAACCAGTCCAGCGCAGGGCGGGGCGGCTCCCGCTCTGCTGCTaGTGGCGGCATTTGGCGCGG +
Preference number: 4 (lower is better)
Translates to: TAFPPRRKLEPVQRRAGRLPLCC*WRHLAR
Trigger: CCGCGCCAAATGCCGCCAGCAGCAGCAGAGCGGGAG...CCGCCCCGCCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGCGGGAACGCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp CAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGCCGCTCTGCTGCTGCTaGCGGCATTTGGCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: QRRAVQQQQQDRDHGGRRPLCCC*RHLARR
Trigger: CCGCCGCGCCAAATGCCGCCAGCAGCAGCAGAGCGG...CCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR CCA 90 bp GAGCTGGACGCCGAGCTAGAGGACGAGGCAGAGCTGGACACAGCTGGCGGCGTGGGCGCCGCGGGTCATTaGTGGCCACGTGGACCCGCG +
Preference number: 4 (lower is better)
Translates to: ELDAELEDEAELDTAGGVGAAGH*WPRGPA
Trigger: CGCGGGTCCACGTGGCCACCAATGACCCGCGGCGCC...CACGCCGCCAGCTGTGTCCAGCTCTGCCTCGTCCTCTAGCTCGGCGTCCAGCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR TCA 90 bp CAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGCCAGCTGTGAACGCGTaGAGGTGGTGCGCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: QRRAVQQQQQDRDHGGRRPAVNA*RWCAPA
Trigger: GGCGGGAGCGCACCACCTTCACGCGTTCACAGCTGG...CCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR GCA 90 bp CAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGCTCCCGCTCTGCTGCTaGTGGCGGCATTTGGCGCGG +
Preference number: 4 (lower is better)
Translates to: QRRAVQQQQQDRDHGGRRLPLCC*WRHLAR
Trigger: CCGCGCCAAATGCCGCCAGCAGCAGCAGAGCGGGAG...CCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR GCA 90 bp GCCGCTGCAGCCGCTGGGTTGGCGGAAGAGCTGGACGCCGAGCTAGAGGACGAGCTCCCGCTCTGCTGCTaGTGGCGGCATTTGGCGCGG +
Preference number: 4 (lower is better)
Translates to: AAAAAGLAEELDAELEDELPLCC*WRHLAR
Trigger: CCGCGCCAAATGCCGCCAGCAGCAGCAGAGCGGGAG...CTCGTCCTCTAGCTCGGCGTCCAGCTCTTCCGCCAACCCAGCGGCTGCAGCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR GCA 90 bp CAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGCCGCTCCCGCTCTGCTaGTGCTGGCGGCATTTGGCG +
Preference number: 4 (lower is better)
Translates to: QRRAVQQQQQDRDHGGRRPLPLC*CWRHLA
Trigger: CGCCAAATGCCGCCAGCAGCAGCAGAGCGGGAGCGG...CCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR GCA 90 bp ACAGCGTTCCCGCCGAGGCGGAAGCTTGAACCAGTCCAGCGCAGGGCGGGGCGGTCAGCCCTGCGCCCCTaGCCAACCCCCACCTCTGTA +
Preference number: 4 (lower is better)
Translates to: TAFPPRRKLEPVQRRAGRSALRP*PTPTSV
Trigger: TACAGAGGTGGGGGTTGGGCAGGGGCGCAGGGCTGA...CCGCCCCGCCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGCGGGAACGCTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp ACAGCGTTCCCGCCGAGGCGGAAGCTTGAACCAGTCCAGCGCAGGGCGGGGCGGGAGCACGTCCAGCTGTaGACGCGTGAAGGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: TAFPPRRKLEPVQRRAGREHVQL*TREGGA
Trigger: CGCACCACCTTCACGCGTTCACAGCTGGACGTGCTC...CCGCCCCGCCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGCGGGAACGCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp CAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGGCCGGGCAGCCAACCTaGTTGCTCGTCGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: QRRAVQQQQQDRDHGGRRAGQPT*LLVGIS
Trigger: GGAGATGCCGACGAGCAAGCAGGTTGGCTGCCCGGC...CCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366671.7
CDS-3UTR TCA 90 bp CTGGTGTACTCAGCGACGACGCGGCCGCCACCGGGTTCCCACCTAGTCCCGCAGAGCTGGTGCGGGTGGTaGTGTGAGTGCATGGGCGCT +
Preference number: 4 (lower is better)
Translates to: LVYSATTRPPPGSHLVPQSWCGW*CECMGA
Trigger: AGCGCCCATGCACTCACATCACCACCCGCACCAGCT...CTGCGGGACTAGGTGGGAACCCGGTGGCGGCCGCGTCGTCGCTGAGTACACCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR GCA 90 bp GGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCAGGGCGGGGCGGGATaGGGCTCTGTGCGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GAAAATGSGPRRAQVVAFQGGAG*GSVRGR
Trigger: CCTTCCGCGCACAGAGCCGCATCCCGCCCCGCCCTG...AAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp TGCAGCTACGGAGCGCTGCATACACGAGGTGTTGCTAGGCGCGGCCAATGGCTCGTGCGCTCCCGCCGCTaGTTCCGCGGAGTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: CSYGALHTRGVARRGQWLVRSRR*FRGVAA
Trigger: CGCAGCCACTCCGCGGAAGCAGCGGCGGGAGCGCAC...GAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCGCTCCGTAGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp CTGGTGTACTCAGCGACGACGCGGCCGCCACCGGGTTCCCACCTAGTCCCGCAGCATCATGCTAACAGCTaGGTGGAGGCGCCCCGACGG +
Preference number: 4 (lower is better)
Translates to: LVYSATTRPPPGSHLVPQHHANS*VEAPRR
Trigger: CCGTCGGGGCGCCTCCACCCAGCTGTTAGCATGATG...CTGCGGGACTAGGTGGGAACCCGGTGGCGGCCGCGTCGTCGCTGAGTACACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp GGAAGAAACGCCGGGAGGCTCTGGCCGGCAGGCGTGGAGCAAAATCGAGGGCAGCTGCAGCCGCTGGGTTaGCGGAAGAGCTGGACGCCG +
Preference number: 4 (lower is better)
Translates to: GRNAGRLWPAGVEQNRGQLQPLG*RKSWTP
Trigger: CGGCGTCCAGCTCTTCCGCCAACCCAGCGGCTGCAG...CTGCCCTCGATTTTGCTCCACGCCTGCCGGCCAGAGCCTCCCGGCGTTTCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GCTGGACGCCGAGCTAGAGGACGAGGCAGAGCTGGACACAGCTGGCGGCGTGAAGCTAGGCGCGGCCAATaGCTCCGGCACCGACACGGA +
Preference number: 4 (lower is better)
Translates to: AGRRARGRGRAGHSWRREARRGQ*LRHRHG
Trigger: TCCGTGTCGGTGCCGGAGCCATTGGCCGCGCCTAGC...TTCACGCCGCCAGCTGTGTCCAGCTCTGCCTCGTCCTCTAGCTCGGCGTCCAGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp TGCAGCTACGGAGCGCTGCATACACGAGGTGTTGCTAGGCGCGGCCAATGGCTCGCTGCTTCCGCGGAGTaGCTGCGGGGACACGCGGGG +
Preference number: 4 (lower is better)
Translates to: CSYGALHTRGVARRGQWLAASAE*LRGHAG
Trigger: CCCCGCGTGTCCCCGCAGCCACTCCGCGGAAGCAGC...GAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCGCTCCGTAGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CAA 72 bp CCTGACTATGTACAGCGTTCCCGCCGAGGCGGAAGCTaGAACCAGTCCAGCGCAGGGCGGGGCGGGATGCGG +
Preference number: 4 (lower is better)
Translates to: PDYVQRSRRGGS*NQSSAGRGGMR
Trigger: CCGCATCCCGCCCCGCCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGCGGGAACGCTGTACATAGTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR CAA 72 bp GCGCCTGCAGCTACGGAGCGCTGCATACACGAGGTGTaGCTAGGCGCGGCCAATGGCTCCGGCACCGACACG +
Preference number: 4 (lower is better)
Translates to: APAATERCIHEV*LGAANGSGTDT
Trigger: CGTGTCGGTGCCGGAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCGCTCCGTAGCTGCAGGCGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR TCA 90 bp CAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGCCACCTCCTCCCGCATaGAGATGTCAGGGTAGCGAG +
Preference number: 4 (lower is better)
Translates to: QRRAVQQQQQDRDHGGRRPPPPA*RCQGSE
Trigger: CTCGCTACCCTGACATCTTCATGCGGGAGGAGGTGG...CCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR TCA 90 bp TGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCTCACGGACGCGGGCGCTaGGCCTGGCGAGATGGAGGC +
Preference number: 4 (lower is better)
Translates to: CSSSNRIGTTEGAGSCVSHGRGR*AWRDGG
Trigger: GCCTCCATCTCGCCAGGCTCAGCGCCCGCGTCCGTG...AGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR TCA 90 bp GGAAGAAACGCCGGGAGGCTCTGGCCGGCAGGCGTGGAGCAAAATCGAGGGCAGAGGGTGCCATGGGGCTaGGCTGGTGCGGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: GRNAGRLWPAGVEQNRGQRVPWG*AGAGGD
Trigger: ATCACCACCCGCACCAGCTCAGCCCCATGGCACCCT...CTGCCCTCGATTTTGCTCCACGCCTGCCGGCCAGAGCCTCCCGGCGTTTCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp TTCTTCTTGGCTGGGCGGCTCTTGGTTCCGCTCCCGCTCTGCTGCTGCTGGCGGAGGGTGCCATGGGGCTaGGCTGGTGCGGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: FFLAGRLLVPLPLCCCWRRVPWG*AGAGGD
Trigger: ATCACCACCCGCACCAGCTCAGCCCCATGGCACCCT...CCGCCAGCAGCAGCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCAAGAAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR TCA 90 bp ACAGCGTTCCCGCCGAGGCGGAAGCTTGAACCAGTCCAGCGCAGGGCGGGGCGGTCCCTGGAACGGACCTaGCTATGTACAGCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: TAFPPRRKLEPVQRRAGRSLERT*LCTAFP
Trigger: CGGGAACGCTGTACATAGTCAGGTCCGTTCCAGGGA...CCGCCCCGCCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGCGGGAACGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp GGACTTCTTCTTGGCTGGGCGGCTCTTGGTTCCGCTCCCGCTCTGCTGCTGCTGCCGCTCCCGCTCTGCTaGTGCTGGCGGCATTTGGCG +
Preference number: 4 (lower is better)
Translates to: GLLLGWAALGSAPALLLLPLPLC*CWRHLA
Trigger: CGCCAAATGCCGCCAGCAGCAGCAGAGCGGGAGCGG...CAGCAGCAGCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCAAGAAGAAGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR GCA 90 bp GCGCTGCATACACGAGGTGTTGCTAGGCGCGGCCAATGGCTCCGGCACCGACACCGCCATGGAGGAGGGTaGCATGGGGCTGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ALHTRGVARRGQWLRHRHRHGGG*HGAELV
Trigger: CACCAGCTCAGCCCCATGGCACCCTCCTCCATGGCG...GTGTCGGTGCCGGAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR GCA 90 bp GAGCTGGACGCCGAGCTAGAGGACGAGGCAGAGCTGGACACAGCTGGCGGCGTGGGCAAAGGCGGGCGGTaGAGCAGCAGCAACAGGATC +
Preference number: 4 (lower is better)
Translates to: ELDAELEDEAELDTAGGVGKGGR*SSSNRI
Trigger: GATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTGCC...CACGCCGCCAGCTGTGTCCAGCTCTGCCTCGTCCTCTAGCTCGGCGTCCAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR GCA 90 bp TGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCTCAGGGCGGGGCGGGATaGGGCTCTGTGCGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: CSSSNRIGTTEGAGSCVSQGGAG*GSVRGR
Trigger: CCTTCCGCGCACAGAGCCGCATCCCGCCCCGCCCTG...AGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GAGGCAGCTGGTGTACTCAGCGACGACGCGGCCGCCACCGGGTTCCCACCTAGTATGCTAACAGCTGGGTaGAGGCGCCCCGACGGATCC +
Preference number: 4 (lower is better)
Translates to: EAAGVLSDDAAATGFPPSMLTAG*RRPDGS
Trigger: GGATCCGTCGGGGCGCCTCCACCCAGCTGTTAGCAT...ACTAGGTGGGAACCCGGTGGCGGCCGCGTCGTCGCTGAGTACACCAGCTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp GCGGAAGAAACGCCGGGAGGCTCTGGCCGGCAGGCGTGGAGCAAAATCGAGGGCGCTGGCGGCGTGAATTaGCCACTGCTTTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: AEETPGGSGRQAWSKIEGAGGVN*PLLSEP
Trigger: GGGCTCCGAAAGCAGTGGCCAATTCACGCCGCCAGC...GCCCTCGATTTTGCTCCACGCCTGCCGGCCAGAGCCTCCCGGCGTTTCTTCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GGACTTCTTCTTGGCTGGGCGGCTCTTGGTTCCGCTCCCGCTCTGCTGCTGCTGCTGCAGCCGCTGGGTTaGCGGAAGAGCTGGACGCCG +
Preference number: 4 (lower is better)
Translates to: GLLLGWAALGSAPALLLLLQPLG*RKSWTP
Trigger: CGGCGTCCAGCTCTTCCGCCAACCCAGCGGCTGCAG...CAGCAGCAGCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCAAGAAGAAGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp CAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGCCTGGCCGTAGGACATaGGATAAGAGGCTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: QRRAVQQQQQDRDHGGRRPGRRT*DKRLLR
Trigger: CCGCAGCAGCCTCTTATCCCATGTCCTACGGCCAGG...CCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
3UTR CAA 72 bp GAGCCCGAGCTCTCCCGCACTGGAGAGGACTTCTTCTaGGCTGGGCGGCTCTTGGTTCCGCTCCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: EPELSRTGEDFF*AGRLLVPLPLC
Trigger: GCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCAAGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCGGGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
3UTR CAA 72 bp GGACGAGGCAGAGCTGGACACAGCTGGCGGCGTGAATaGGCCACTGCTTTCGGAGCCCGAGCTCTCCCGCAC +
Preference number: 4 (lower is better)
Translates to: GRGRAGHSWRRE*ATAFGARALPH
Trigger: GTGCGGGAGAGCTCGGGCTCCGAAAGCAGTGGCCAATTCACGCCGCCAGCTGTGTCCAGCTCTGCCTCGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR TCA 90 bp GGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCCAGCTGTGAACGCGTaGAGGTGGTGCGCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: GAAAATGSGPRRAQVVAFPAVNA*RWCAPA
Trigger: GGCGGGAGCGCACCACCTTCACGCGTTCACAGCTGG...AAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR TCA 90 bp CGTAGGGTAGCCTTGGCCGTAGCTGCCGCCCTGGCCGTAGGACATGGGATAAGACCAGCTGTGAACGCGTaGAGGTGGTGCGCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: RRVALAVAAALAVGHGIRPAVNA*RWCAPA
Trigger: GGCGGGAGCGCACCACCTTCACGCGTTCACAGCTGG...TCTTATCCCATGTCCTACGGCCAGGGCGGCAGCTACGGCCAAGGCTACCCTACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR TCA 90 bp ATTGGCCACTGCTTTCGGAGCCCGAGCTCTCCCGCACTGGAGAGGACTTCTTCTCACGGACGCGGGCGCTaGGCCTGGCGAGATGGAGGC +
Preference number: 4 (lower is better)
Translates to: IGHCFRSPSSPALERTSSHGRGR*AWRDGG
Trigger: GCCTCCATCTCGCCAGGCTCAGCGCCCGCGTCCGTG...AGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCGGGCTCCGAAAGCAGTGGCCAAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp GGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTGATGGTGGCCCGCCATaGAGGAGGGTGCCATGGGGC +
Preference number: 4 (lower is better)
Translates to: GAAAATGSGPRRAQVVAFDGGPP*RRVPWG
Trigger: GCCCCATGGCACCCTCCTCCATGGCGGGCCACCATC...AAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR CCA 90 bp GCTGGACGCCGAGCTAGAGGACGAGGCAGAGCTGGACACAGCTGGCGGCGTGAACGGGTGGTGCGCATGTaGGTGGTGATGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AGRRARGRGRAGHSWRRERVVRM*VVMMVA
Trigger: GGCCACCATCATCACCACCCACATGCGCACCACCCG...TTCACGCCGCCAGCTGTGTCCAGCTCTGCCTCGTCCTCTAGCTCGGCGTCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp ACAGCGTTCCCGCCGAGGCGGAAGCTTGAACCAGTCCAGCGCAGGGCGGGGCGGCAAGTGGCACAAAAATaGGGGCGGCAGTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: TAFPPRRKLEPVQRRAGRQVAQK*GRQCRQ
Trigger: TTGCCTGCACTGCCGCCCCCATTTTTGTGCCACTTG...CCGCCCCGCCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGCGGGAACGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR CAA 72 bp CGCACTGGAGAGGACTTCTTCTTGGCTGGGCGGCTCTaGGTTCCGCTCCCGCTCTGCTGCTGCTGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: RTGEDFFLAGRL*VPLPLCCCWRH
Trigger: ATGCCGCCAGCAGCAGCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCAAGAAGAAGTCCTCTCCAGTGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR TCA 90 bp GCGCTGCATACACGAGGTGTTGCTAGGCGCGGCCAATGGCTCCGGCACCGACACACACAGCTGGCGGCGTaGATTGGCCACTGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: ALHTRGVARRGQWLRHRHTQLAA*IGHCFR
Trigger: CCGAAAGCAGTGGCCAATTCACGCCGCCAGCTGTGT...GTGTCGGTGCCGGAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR TCA 90 bp GCGGAAGAAACGCCGGGAGGCTCTGGCCGGCAGGCGTGGAGCAAAATCGAGGGCCGGGCTCCAGATAGATaGGGCAGCTGGTGTACTCAG +
Preference number: 4 (lower is better)
Translates to: AEETPGGSGRQAWSKIEGRAPDR*GSWCTQ
Trigger: CTGAGTACACCAGCTGCCTCATCTATCTGGAGCCCG...GCCCTCGATTTTGCTCCACGCCTGCCGGCCAGAGCCTCCCGGCGTTTCTTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp GAGCTGGACGCCGAGCTAGAGGACGAGGCAGAGCTGGACACAGCTGGCGGCGTGCGGGCTCCAGATAGATaGGGCAGCTGGTGTACTCAG +
Preference number: 4 (lower is better)
Translates to: ELDAELEDEAELDTAGGVRAPDR*GSWCTQ
Trigger: CTGAGTACACCAGCTGCCTCATCTATCTGGAGCCCG...CACGCCGCCAGCTGTGTCCAGCTCTGCCTCGTCCTCTAGCTCGGCGTCCAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR TCA 90 bp CAGGCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTGCACTAAAAACTCACACGGACGCGGGCGCTaGGCCTGGCGAGATGGAGGC +
Preference number: 4 (lower is better)
Translates to: QARGLSADFGERRCTKNSHGRGR*AWRDGG
Trigger: GCCTCCATCTCGCCAGGCTCAGCGCCCGCGTCCGTG...TGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp TGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCTGCCGAGGCGGAAGCTTaGACCAGTCCAGCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: CSSSNRIGTTEGAGSCVSAEAEA*TSPAQG
Trigger: GCCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGC...AGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp GGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTTGGCCTGCCCTCAGCTaGCGGGGCCGTTCACCATCT +
Preference number: 4 (lower is better)
Translates to: GAAAATGSGPRRAQVVAFWPALS*RGRSPS
Trigger: AGATGGTGAACGGCCCCGGCAGCTGAGGGCAGGCCA...AAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR GCA 90 bp CAGGCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTGCACTAAAAACTCACGGGGCCAGGAGCGGTaGAGGGCTCCCACCACGCAG +
Preference number: 4 (lower is better)
Translates to: QARGLSADFGERRCTKNSRGQER*RAPTTQ
Trigger: CTGCGTGGTGGGAGCCCTGCACCGCTCCTGGCCCCG...TGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp CCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCGCGCCCGGGGCCAGGAGCGGTaGAGGGCTCCCACCACGCAG +
Preference number: 4 (lower is better)
Translates to: PPLYPDLSVSSTLRISRARGQER*RAPTTQ
Trigger: CTGCGTGGTGGGAGCCCTGCACCGCTCCTGGCCCCG...GGCGCGGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp AGGCAAGCCCAGAGCCACCGTAGCCTTGGTGGTGGTGGTGGTGATGGTGGTGGTCATGGGATAAGAGGCTaGTGCGGTGGCGGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: RQAQSHRSLGGGGGDGGGHGIRG*CGGGAC
Trigger: GCAGGCGCCGCCACCGCAGCAGCCTCTTATCCCATG...ACCACCACCATCACCACCACCACCACCAAGGCTACGGTGGCTCTGGGCTTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR GCA 90 bp CGTAGGGTAGCCTTGGCCGTAGCTGCCGCCCTGGCCGTAGGACATGGGATAAGAAGCCTTGGCCGTAGCTaGCGCCCTGGCCGTAGGACA +
Preference number: 4 (lower is better)
Translates to: RRVALAVAAALAVGHGIRSLGRS*RPGRRT
Trigger: TGTCCTACGGCCAGGGCGGCAGCTACGGCCAAGGCT...TCTTATCCCATGTCCTACGGCCAGGGCGGCAGCTACGGCCAAGGCTACCCTACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR GCA 90 bp GCGGAAGAAACGCCGGGAGGCTCTGGCCGGCAGGCGTGGAGCAAAATCGAGGGCGCGCTAGGTATGAGCTaGAGTCCACGCCGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: AEETPGGSGRQAWSKIEGALGMS*SPRRQS
Trigger: ACTTTGGCGGCGTGGACTGCAGCTCATACCTAGCGC...GCCCTCGATTTTGCTCCACGCCTGCCGGCCAGAGCCTCCCGGCGTTTCTTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp CTTGGCCGTAGCTGCCGCCCTGGCCGTAGGACATGGGATAAGAGGCTGCTGCGGCAGGGTAGCGAGTCTTaGCGAAGAGCGCCTCGAGCA +
Preference number: 4 (lower is better)
Translates to: LGRSCRPGRRTWDKRLLRQGSES*RRAPRA
Trigger: TGCTCGAGGCGCTCTTCGCCAAGACTCGCTACCCTG...CCGCAGCAGCCTCTTATCCCATGTCCTACGGCCAGGGCGGCAGCTACGGCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp GCCACTGCTTTCGGAGCCCGAGCTCTCCCGCACTGGAGAGGACTTCTTCTTGGCTGGCTGGGCGGCTCTTaGTTCCGCTCCCGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ATAFGARALPHWRGLLLGWLGGS*FRSRSA
Trigger: AGCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCA...GCCAAGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCGGGCTCCGAAAGCAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp CTGGTGTACTCAGCGACGACGCGGCCGCCACCGGGTTCCCACCTAGTCCCGCAGGAGAGGACTTCTTCTTaGCTGGGCGGCTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: LVYSATTRPPPGSHLVPQERTSS*LGGSWF
Trigger: GAACCAAGAGCCGCCCAGCCAAGAAGAAGTCCTCTC...CTGCGGGACTAGGTGGGAACCCGGTGGCGGCCGCGTCGTCGCTGAGTACACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp CGTAGGGTAGCCTTGGCCGTAGCTGCCGCCCTGGCCGTAGGACATGGGATAAGAAGCCGCTGCAGCCGCTaGGTTGGCGGAAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RRVALAVAAALAVGHGIRSRCSR*VGGRAG
Trigger: TCCAGCTCTTCCGCCAACCCAGCGGCTGCAGCGGCT...TCTTATCCCATGTCCTACGGCCAGGGCGGCAGCTACGGCCAAGGCTACCCTACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp TGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCTGATGGTGGCCCGCCATaGAGGAGGGTGCCATGGGGC +
Preference number: 4 (lower is better)
Translates to: CSSSNRIGTTEGAGSCVSDGGPP*RRVPWG
Trigger: GCCCCATGGCACCCTCCTCCATGGCGGGCCACCATC...AGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR CCA 90 bp CAGGCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTGCACTAAAAACTCACTGTGCGCGGAAGGCTaGGGACGCGCTCCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: QARGLSADFGERRCTKNSLCAEG*GRAPPA
Trigger: CGCCGGAGGAGCGCGTCCCCAGCCTTCCGCGCACAG...TGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp GCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCTTTGGCCTGCCCTCAGCTaGCGGGGCCGTTCACCATCT +
Preference number: 4 (lower is better)
Translates to: AAAATGSGPRRAQVVAFLWPALS*RGRSPS
Trigger: AGATGGTGAACGGCCCCGGCAGCTGAGGGCAGGCCA...AAGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR GCA 90 bp TGCAGCTACGGAGCGCTGCATACACGAGGTGTTGCTAGGCGCGGCCAATGGCTCGTTCCGCTCCCGCTCTaGTGCTGCTGGCGGCATTTG +
Preference number: 4 (lower is better)
Translates to: CSYGALHTRGVARRGQWLVPLPL*CCWRHL
Trigger: CAAATGCCGCCAGCAGCAGCAGAGCGGGAGCGGAAC...GAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCGCTCCGTAGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR GCA 90 bp ATTGGCCACTGCTTTCGGAGCCCGAGCTCTCCCGCACTGGAGAGGACTTCTTCTTGCGGTGGCGGCGCCTaGAGCTACGGAGCGCTGCAT +
Preference number: 4 (lower is better)
Translates to: IGHCFRSPSSPALERTSSCGGGA*SYGALH
Trigger: ATGCAGCGCTCCGTAGCTGCAGGCGCCGCCACCGCA...AGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCGGGCTCCGAAAGCAGTGGCCAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR GCA 90 bp TGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCTAGCCTTGGCCGTAGCTaGCGCCCTGGCCGTAGGACA +
Preference number: 4 (lower is better)
Translates to: CSSSNRIGTTEGAGSCVSSLGRS*RPGRRT
Trigger: TGTCCTACGGCCAGGGCGGCAGCTACGGCCAAGGCT...AGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR GCA 90 bp GCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCTTAGCCTTGGCCGTAGCTaGCGCCCTGGCCGTAGGACA +
Preference number: 4 (lower is better)
Translates to: AAAATGSGPRRAQVVAFLSLGRS*RPGRRT
Trigger: TGTCCTACGGCCAGGGCGGCAGCTACGGCCAAGGCT...AAGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR GCA 90 bp TCTGTTTCCTCCACACTTCGGATATCCCGCGCCCAGCTTCCTGAAACCAAGCGGCGGGATGCGGCTCTGTaGGCGGAAGGCTGGGGACGC +
Preference number: 4 (lower is better)
Translates to: SVSSTLRISRAQLPETKRRDAAL*AEGWGR
Trigger: GCGTCCCCAGCCTTCCGCGCACAGAGCCGCATCCCG...CCGCTTGGTTTCAGGAAGCTGGGCGCGGGATATCCGAAGTGTGGAGGAAACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp CGCTGCATACACGAGGTGTTGCTAGGCGCGGCCAATGGCTCCGGCACCGACACGGGACTTCTTCTTGGCTaGGCGGCTCTTGGTTCCGCT +
Preference number: 4 (lower is better)
Translates to: RCIHEVLLGAANGSGTDTGLLLG*AALGSA
Trigger: AGCGGAACCAAGAGCCGCCCAGCCAAGAAGAAGTCC...CGTGTCGGTGCCGGAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp ACAGTCGGGGGAGTTGAAGTTGAGTTTCCAGGCGGAGGAAGCAGCAGCGGCGCCGCTGGCGGCGTGAATTaGCCACTGCTTTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: TVGGVEVEFPGGGSSSGAAGGVN*PLLSEP
Trigger: GGGCTCCGAAAGCAGTGGCCAATTCACGCCGCCAGC...GGCGCCGCTGCTGCTTCCTCCGCCTGGAAACTCAACTTCAACTCCCCCGACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp TACTGGACGAAGCGGCCAAAGCCAAAATTGATACACAGGCGCGCGGGCTCTCCGCTGCAGCCGCTGGGTTaGCGGAAGAGCTGGACGCCG +
Preference number: 4 (lower is better)
Translates to: YWTKRPKPKLIHRRAGSPLQPLG*RKSWTP
Trigger: CGGCGTCCAGCTCTTCCGCCAACCCAGCGGCTGCAG...CGGAGAGCCCGCGCGCCTGTGTATCAATTTTGGCTTTGGCCGCTTCGTCCAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp AATCGAGGGCAGCTGAAGGGGCAGCAGTCTGCGCGGGAGGAACTCTTAGTGGTTGATGGTGGCCCGCCATaGAGGAGGGTGCCATGGGGC +
Preference number: 4 (lower is better)
Translates to: NRGQLKGQQSAREELLVVDGGPP*RRVPWG
Trigger: GCCCCATGGCACCCTCCTCCATGGCGGGCCACCATC...AACCACTAAGAGTTCCTCCCGCGCAGACTGCTGCCCCTTCAGCTGCCCTCGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GGAAGAAACGCCGGGAGGCTCTGGCCGGCAGGCGTGGAGCAAAATCGAGGGCAGTGGGCTCACAAGACCTaGAACCGCCATGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GRNAGRLWPAGVEQNRGQWAHKT*NRHEAW
Trigger: CCAAGCCTCATGGCGGTTCCAGGTCTTGTGAGCCCA...CTGCCCTCGATTTTGCTCCACGCCTGCCGGCCAGAGCCTCCCGGCGTTTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp CGCTGCATACACGAGGTGTTGCTAGGCGCGGCCAATGGCTCCGGCACCGACACGTGGGCTCACAAGACCTaGAACCGCCATGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RCIHEVLLGAANGSGTDTWAHKT*NRHEAW
Trigger: CCAAGCCTCATGGCGGTTCCAGGTCTTGTGAGCCCA...CGTGTCGGTGCCGGAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp CAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTGCAAGTGCTTAATAGCTGTCCACCCAGCGCACTCCGCTaGGGCGGAAGAAACGCCGGG +
Preference number: 4 (lower is better)
Translates to: QRIRAQSLRRLQVLNSCPPSALR*GGRNAG
Trigger: CCCGGCGTTTCTTCCGCCCCAGCGGAGTGCGCTGGG...TGGACAGCTATTAAGCACTTGCAGCCTTCGGAGGCTCTGCGCTCTGATCCGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp CTCCTCTTTCATTCCTGGGCTCACAAGACCTGGAACCGCCATGAGGCTTGGTCCACTCGGGCAGGCCCCTaGCAGGCCCAGATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LLFHSWAHKTWNRHEAWSTRAGP*QAQISA
Trigger: GGCCGAGATCTGGGCCTGCCAGGGGCCTGCCCGAGT...GGACCAAGCCTCATGGCGGTTCCAGGTCTTGTGAGCCCAGGAATGAAAGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR TCA 90 bp GCTGGACGCCGAGCTAGAGGACGAGGCAGAGCTGGACACAGCTGGCGGCGTGAAGACCTGGAACCGCCATaGGGCTTGGTCCTTATAGTC +
Preference number: 4 (lower is better)
Translates to: AGRRARGRGRAGHSWRREDLEPP*GLVLIV
Trigger: GACTATAAGGACCAAGCCTCATGGCGGTTCCAGGTC...TTCACGCCGCCAGCTGTGTCCAGCTCTGCCTCGTCCTCTAGCTCGGCGTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR TCA 90 bp GGAAGAAACGCCGGGAGGCTCTGGCCGGCAGGCGTGGAGCAAAATCGAGGGCAGCCCACCTCTGTACCCTaGCTTGTCTGTTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GRNAGRLWPAGVEQNRGQPTSVP*LVCFLH
Trigger: GTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGGG...CTGCCCTCGATTTTGCTCCACGCCTGCCGGCCAGAGCCTCCCGGCGTTTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp ATTGGCCACTGCTTTCGGAGCCCGAGCTCTCCCGCACTGGAGAGGACTTCTTCTTGGCCTGCCCTCAGCTaGCGGGGCCGTTCACCATCT +
Preference number: 4 (lower is better)
Translates to: IGHCFRSPSSPALERTSSWPALS*RGRSPS
Trigger: AGATGGTGAACGGCCCCGGCAGCTGAGGGCAGGCCA...AGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCGGGCTCCGAAAGCAGTGGCCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR GCA 90 bp AACCCCCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCGTGCGCTCCCGCCGCTaGTTCCGCGGAGTGGCCGGA +
Preference number: 4 (lower is better)
Translates to: NPHLCTLTCLFPPHFGYPVRSRR*FRGVAG
Trigger: TCCGGCCACTCCGCGGAAGCAGCGGCGGGAGCGCAC...GGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGGGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp CGAGGCAGAGCTGGACACAGCTGGCGGCGTGAATTGGCCACTGCTTTCGGAGCCGCGCTAGGTATGAGCTaGAGTCCACGCCGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: RGRAGHSWRRELATAFGAALGMS*SPRRQS
Trigger: ACTTTGGCGGCGTGGACTGCAGCTCATACCTAGCGC...GGCTCCGAAAGCAGTGGCCAATTCACGCCGCCAGCTGTGTCCAGCTCTGCCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR GCA 90 bp GCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCTTGGCAAAGGCGGGCGGTaGAGCAGCAGCAACAGGATC +
Preference number: 4 (lower is better)
Translates to: AAAATGSGPRRAQVVAFLGKGGR*SSSNRI
Trigger: GATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTGCC...AAGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR GCA 90 bp CAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGAAATGGGGGCGGCAGTaGAGGCAATGGACATCTTTT +
Preference number: 4 (lower is better)
Translates to: QRRAVQQQQQDRDHGGRRKWGRQ*RQWTSF
Trigger: AAAAGATGTCCATTGCCTGCACTGCCGCCCCCATTT...CCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR GCA 90 bp AATCGAGGGCAGCTGAAGGGGCAGCAGTCTGCGCGGGAGGAACTCTTAGTGGTTTCAGCCCTGCGCCCCTaGCCAACCCCCACCTCTGTA +
Preference number: 4 (lower is better)
Translates to: NRGQLKGQQSAREELLVVSALRP*PTPTSV
Trigger: TACAGAGGTGGGGGTTGGGCAGGGGCGCAGGGCTGA...AACCACTAAGAGTTCCTCCCGCGCAGACTGCTGCCCCTTCAGCTGCCCTCGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTGCACTAAAAACTCACTACCGCTCTGCTGCTGCTaGCGGCATTTGGCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: ARGLSADFGERRCTKNSLPLCCC*RHLARR
Trigger: CCGCCGCGCCAAATGCCGCCAGCAGCAGCAGAGCGG...TAGTGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp CAGGCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTGCACTAAAAACTCAGCTAGGCGCGGCCAATaGCTCCGGCACCGACACGGA +
Preference number: 4 (lower is better)
Translates to: QARGLSADFGERRCTKNSARRGQ*LRHRHG
Trigger: TCCGTGTCGGTGCCGGAGCCATTGGCCGCGCCTAGC...TGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCTTCGGGTGGTGCGCATGTaGGTGGTGATGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AAAATGSGPRRAQVVAFLRVVRM*VVMMVA
Trigger: GGCCACCATCATCACCACCCACATGCGCACCACCCG...AAGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR CCA 90 bp CAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTGCAAGTGCTTAATAGCTGTCCAAACGCCGGGAGGCTCTaGCCGGCAGGCGTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: QRIRAQSLRRLQVLNSCPNAGRL*PAGVEQ
Trigger: TTGCTCCACGCCTGCCGGCCAGAGCCTCCCGGCGTT...TGGACAGCTATTAAGCACTTGCAGCCTTCGGAGGCTCTGCGCTCTGATCCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp AACCCCCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCCTGTGCGCGGAAGGCTaGGGACGCGCTCCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: NPHLCTLTCLFPPHFGYPLCAEG*GRAPPA
Trigger: CGCCGGAGGAGCGCGTCCCCAGCCTTCCGCGCACAG...GGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGGGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp ATTGGCCACTGCTTTCGGAGCCCGAGCTCTCCCGCACTGGAGAGGACTTCTTCTGCCGCGGGTCATTGGTaGCCACGTGGACCCGCGATA +
Preference number: 4 (lower is better)
Translates to: IGHCFRSPSSPALERTSSAAGHW*PRGPAI
Trigger: TATCGCGGGTCCACGTGGCCACCAATGACCCGCGGC...AGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCGGGCTCCGAAAGCAGTGGCCAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR TCA 90 bp GGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCGGGCTCCAGATAGATaGGGCAGCTGGTGTACTCAG +
Preference number: 4 (lower is better)
Translates to: GAAAATGSGPRRAQVVAFRAPDR*GSWCTQ
Trigger: CTGAGTACACCAGCTGCCTCATCTATCTGGAGCCCG...AAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR TCA 90 bp TGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCTAGCAGTCGGCAGAGTTaGAGGCAAGCCCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: CSSSNRIGTTEGAGSCVSSSRQS*RQAQSH
Trigger: GTGGCTCTGGGCTTGCCTTCAACTCTGCCGACTGCT...AGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR TCA 90 bp GCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTGCACTAAAAACTCACTAGCCGAGGCGGAAGCTTaGACCAGTCCAGCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ARGLSADFGERRCTKNSLAEAEA*TSPAQG
Trigger: GCCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGC...TAGTGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp GGAAGAAACGCCGGGAGGCTCTGGCCGGCAGGCGTGGAGCAAAATCGAGGGCAGCTTAAGCGCTTCTACTaGAACGTTGGAGCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: GRNAGRLWPAGVEQNRGQLKRFY*NVGAQR
Trigger: ACGCTGGGCTCCAACGTTTCAGTAGAAGCGCTTAAG...CTGCCCTCGATTTTGCTCCACGCCTGCCGGCCAGAGCCTCCCGGCGTTTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366671.7
CDS-3UTR GCA 90 bp GCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTGCACTAAAAACTCACTATGCGGTGGCGGCGCCTaGAGCTACGGAGCGCTGCAT +
Preference number: 4 (lower is better)
Translates to: ARGLSADFGERRCTKNSLCGGGA*SYGALH
Trigger: ATGCAGCGCTCCGTAGCTGCAGGCGCCGCCACCGCA...TAGTGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp CAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTGCAAGTGCTTAATAGCTGTCCACATGGGATAAGAGGCTaGTGCGGTGGCGGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: QRIRAQSLRRLQVLNSCPHGIRG*CGGGAC
Trigger: GCAGGCGCCGCCACCGCAGCAGCCTCTTATCCCATG...TGGACAGCTATTAAGCACTTGCAGCCTTCGGAGGCTCTGCGCTCTGATCCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp ACAGCGTTCCCGCCGAGGCGGAAGCTTGAACCAGTCCAGCGCAGGGCGGGGCGGTCCGAAGGCTGCAAGTaGTTAATAGCTGTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: TAFPPRRKLEPVQRRAGRSEGCK*LIAVQK
Trigger: TTTCTGGACAGCTATTAAGCACTTGCAGCCTTCGGA...CCGCCCCGCCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGCGGGAACGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GCGCTGCATACACGAGGTGTTGCTAGGCGCGGCCAATGGCTCCGGCACCGACACCCAACCTTGTCGGAGTaGCTTGTCTTGCTCGGTTGT +
Preference number: 4 (lower is better)
Translates to: ALHTRGVARRGQWLRHRHPTLSE*LVLLGC
Trigger: ACAACCGAGCAAGACAAGCCACTCCGACAAGGTTGG...GTGTCGGTGCCGGAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp GCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCTTCAGGGTAGCGAGTCTTaGCGAAGAGCGCCTCGAGCA +
Preference number: 4 (lower is better)
Translates to: AAAATGSGPRRAQVVAFLQGSES*RRAPRA
Trigger: TGCTCGAGGCGCTCTTCGCCAAGACTCGCTACCCTG...AAGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR CCA 90 bp GCTGGACGCCGAGCTAGAGGACGAGGCAGAGCTGGACACAGCTGGCGGCGTGAATTCTTGAACCAGACCTaGACTCTAGACTCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: AGRRARGRGRAGHSWRREFLNQT*TLDSGR
Trigger: CCTGCCGGAGTCTAGAGTCCAGGTCTGGTTCAAGAA...TTCACGCCGCCAGCTGTGTCCAGCTCTGCCTCGTCCTCTAGCTCGGCGTCCAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp TCTGTTTCCTCCACACTTCGGATATCCCGCGCCCAGCTTCCTGAAACCAAGCGGTGGCTGGGCGGCTCTTaGTTCCGCTCCCGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SVSSTLRISRAQLPETKRWLGGS*FRSRSA
Trigger: AGCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCA...CCGCTTGGTTTCAGGAAGCTGGGCGCGGGATATCCGAAGTGTGGAGGAAACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCGAGCTCTCCCGCACTaGAGAGGACTTCTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: GAAAATGSGPRRAQVVAFRALPH*RGLLLG
Trigger: GCCAAGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCG...AAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR CCA 90 bp TGCAGCTACGGAGCGCTGCATACACGAGGTGTTGCTAGGCGCGGCCAATGGCTCCGAGCTCTCCCGCACTaGAGAGGACTTCTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: CSYGALHTRGVARRGQWLRALPH*RGLLLG
Trigger: GCCAAGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCG...GAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCGCTCCGTAGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp AGTGTTGGGCTCAAACAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTGCAAGTGGCTGGCGGCGTGAATTaGCCACTGCTTTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SVGLKQRIRAQSLRRLQVAGGVN*PLLSEP
Trigger: GGGCTCCGAAAGCAGTGGCCAATTCACGCCGCCAGC...CACTTGCAGCCTTCGGAGGCTCTGCGCTCTGATCCGCTGTTTGAGCCCAACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp TACGGAGCGCTGCATACACGAGGTGTTGCTAGGCGCGGCCAATGGCTCCGGCACGGTGATGTGAGTGCATaGGCGCTAGGTATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: YGALHTRGVARRGQWLRHGDVSA*ALGMSC
Trigger: GCAGCTCATACCTAGCGCCCATGCACTCACATCACC...GTGCCGGAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCGCTCCGTA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp TACTGGACGAAGCGGCCAAAGCCAAAATTGATACACAGGCGCGCGGGCTCTCCGCGGGTGGTGCGCATGTaGGTGGTGATGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: YWTKRPKPKLIHRRAGSPRVVRM*VVMMVA
Trigger: GGCCACCATCATCACCACCCACATGCGCACCACCCG...CGGAGAGCCCGCGCGCCTGTGTATCAATTTTGGCTTTGGCCGCTTCGTCCAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp TACTGGACGAAGCGGCCAAAGCCAAAATTGATACACAGGCGCGCGGGCTCTCCGTCTGGCCGGCAGGCGTaGAGCAAAATCGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: YWTKRPKPKLIHRRAGSPSGRQA*SKIEGS
Trigger: GCTGCCCTCGATTTTGCTCCACGCCTGCCGGCCAGA...CGGAGAGCCCGCGCGCCTGTGTATCAATTTTGGCTTTGGCCGCTTCGTCCAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp TGCAGCTACGGAGCGCTGCATACACGAGGTGTTGCTAGGCGCGGCCAATGGCTCTCATTGGTGGCCACGTaGACCCGCGATAGAGGACTC +
Preference number: 4 (lower is better)
Translates to: CSYGALHTRGVARRGQWLSLVAT*TRDRGL
Trigger: GAGTCCTCTATCGCGGGTCCACGTGGCCACCAATGA...GAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCGCTCCGTAGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR TCA 90 bp AATCGAGGGCAGCTGAAGGGGCAGCAGTCTGCGCGGGAGGAACTCTTAGTGGTTAGCAGTCGGCAGAGTTaGAGGCAAGCCCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: NRGQLKGQQSAREELLVVSSRQS*RQAQSH
Trigger: GTGGCTCTGGGCTTGCCTTCAACTCTGCCGACTGCT...AACCACTAAGAGTTCCTCCCGCGCAGACTGCTGCCCCTTCAGCTGCCCTCGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp CAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGAAGAAAAAGCGCCATTaGTTGAGGAAGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: QRRAVQQQQQDRDHGGRRKKKRH*LRKSRR
Trigger: CCTTCTGCTCTTCCTCAATCAATGGCGCTTTTTCTT...CCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp AATCGAGGGCAGCTGAAGGGGCAGCAGTCTGCGCGGGAGGAACTCTTAGTGGTTCCGCGCCCAGCTTCCTaGAACCAAGCGGTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: NRGQLKGQQSAREELLVVPRPAS*NQAVLF
Trigger: GAAGAGAACCGCTTGGTTTCAGGAAGCTGGGCGCGG...AACCACTAAGAGTTCCTCCCGCGCAGACTGCTGCCCCTTCAGCTGCCCTCGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp CAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGACAAAACAAGGGTGTTaGAAGAGAGAAGCCGACAGA +
Preference number: 4 (lower is better)
Translates to: QRRAVQQQQQDRDHGGRRTKQGC*KREADR
Trigger: TCTGTCGGCTTCTCTCTTTCAACACCCTTGTTTTGT...CCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp CAGGCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTGCACTAAAAACTCAGTTCCGCTCCCGCTCTaGTGCTGCTGGCGGCATTTG +
Preference number: 4 (lower is better)
Translates to: QARGLSADFGERRCTKNSVPLPL*CCWRHL
Trigger: CAAATGCCGCCAGCAGCAGCAGAGCGGGAGCGGAAC...TGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp GCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCTTGCGCTAGGTATGAGCTaGAGTCCACGCCGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: AAAATGSGPRRAQVVAFLALGMS*SPRRQS
Trigger: ACTTTGGCGGCGTGGACTGCAGCTCATACCTAGCGC...AAGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR CCA 90 bp CAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTGCAAGTGCTTAATAGCTGTCCAATGCTAACAGCTGGGTaGAGGCGCCCCGACGGATCC +
Preference number: 4 (lower is better)
Translates to: QRIRAQSLRRLQVLNSCPMLTAG*RRPDGS
Trigger: GGATCCGTCGGGGCGCCTCCACCCAGCTGTTAGCAT...TGGACAGCTATTAAGCACTTGCAGCCTTCGGAGGCTCTGCGCTCTGATCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp ATTGGCCACTGCTTTCGGAGCCCGAGCTCTCCCGCACTGGAGAGGACTTCTTCTCCTGGCCGTAGGACATaGGATAAGAGGCTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: IGHCFRSPSSPALERTSSPGRRT*DKRLLR
Trigger: CCGCAGCAGCCTCTTATCCCATGTCCTACGGCCAGG...AGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCGGGCTCCGAAAGCAGTGGCCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp TGCAGCTACGGAGCGCTGCATACACGAGGTGTTGCTAGGCGCGGCCAATGGCTCCAAGTGGCACAAAAATaGGGGCGGCAGTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: CSYGALHTRGVARRGQWLQVAQK*GRQCRQ
Trigger: TTGCCTGCACTGCCGCCCCCATTTTTGTGCCACTTG...GAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCGCTCCGTAGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp ACAGCGTTCCCGCCGAGGCGGAAGCTTGAACCAGTCCAGCGCAGGGCGGGGCGGTTTAGGTTTGTAAACTaGAACTGCGACCCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: TAFPPRRKLEPVQRRAGRFRFVN*NCDPVL
Trigger: AAGCACAGGGTCGCAGTTCCAGTTTACAAACCTAAA...CCGCCCCGCCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGCGGGAACGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp GCTGAAGGGGCAGCAGTCTGCGCGGGAGGAACTCTTAGTGGTTTTGATTTGGAGAGCTGGTGCGGGTGGTaGTGTGAGTGCATGGGCGCT +
Preference number: 4 (lower is better)
Translates to: AEGAAVCAGGTLSGFDLESWCGW*CECMGA
Trigger: AGCGCCCATGCACTCACATCACCACCCGCACCAGCT...CTCCAAATCAAAACCACTAAGAGTTCCTCCCGCGCAGACTGCTGCCCCTTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp AGACCTGGAACCGCCATGAGGCTTGGTCCTTATAGTCCAGACAGTCGGGGGAGTAGCAGTCGGCAGAGTTaGAGGCAAGCCCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: RPGTAMRLGPYSPDSRGSSSRQS*RQAQSH
Trigger: GTGGCTCTGGGCTTGCCTTCAACTCTGCCGACTGCT...ACTCCCCCGACTGTCTGGACTATAAGGACCAAGCCTCATGGCGGTTCCAGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR TCA 90 bp TCTGTTTCCTCCACACTTCGGATATCCCGCGCCCAGCTTCCTGAAACCAAGCGGAAAATCGAGGGCAGCTaGAGGGGCAGCAGTCTGCGC +
Preference number: 4 (lower is better)
Translates to: SVSSTLRISRAQLPETKRKIEGS*RGSSLR
Trigger: GCGCAGACTGCTGCCCCTTCAGCTGCCCTCGATTTT...CCGCTTGGTTTCAGGAAGCTGGGCGCGGGATATCCGAAGTGTGGAGGAAACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp CAGGCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTGCACTAAAAACTCAAAAATCGAGGGCAGCTaGAGGGGCAGCAGTCTGCGC +
Preference number: 4 (lower is better)
Translates to: QARGLSADFGERRCTKNSKIEGS*RGSSLR
Trigger: GCGCAGACTGCTGCCCCTTCAGCTGCCCTCGATTTT...TGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp GCTGTCCAGAAAGACTGGAAGGGGAGGCTTAAGAGTTTAGTAGGGGCTGAAGGGCGCCATGGAGGAGGGTaGCATGGGGCTGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: AVQKDWKGRLKSLVGAEGRHGGG*HGAELV
Trigger: CACCAGCTCAGCCCCATGGCACCCTCCTCCATGGCG...CCCTTCAGCCCCTACTAAACTCTTAAGCCTCCCCTTCCAGTCTTTCTGGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp GGACTTCTTCTTGGCTGGGCGGCTCTTGGTTCCGCTCCCGCTCTGCTGCTGCTGGAGGGCGCAGGTAGTTaGGTTTCTTCTCCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: GLLLGWAALGSAPALLLLEGAGS*VSSPLS
Trigger: TGAAAGAGGAGAAGAAACGCAACTACCTGCGCCCTC...CAGCAGCAGCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCAAGAAGAAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR GCA 90 bp AACCCCCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCGGCAGCCAACCTGCTTaGTCGTCGGCATCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: NPHLCTLTCLFPPHFGYPGSQPA*SSASPG
Trigger: CCCGGGAGATGCCGACGAGCAAGCAGGTTGGCTGCC...GGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGGGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366671.7
CDS-3UTR CCA 90 bp TACGGAGCGCTGCATACACGAGGTGTTGCTAGGCGCGGCCAATGGCTCCGGCACCCCGTTCATGCCGTATaGGGGTTGTTTGAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: YGALHTRGVARRGQWLRHPVHAV*GLFEVR
Trigger: TCTTACCTCAAACAACCCCCATACGGCATGAACGGG...GTGCCGGAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCGCTCCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp AACCCCCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCTGGCTGGGCGGCTCTTaGTTCCGCTCCCGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: NPHLCTLTCLFPPHFGYPWLGGS*FRSRSA
Trigger: AGCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCA...GGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGGGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GCTGTCCAGAAAGACTGGAAGGGGAGGCTTAAGAGTTTAGTAGGGGCTGAAGGGAGCCGCTGCAGCCGCTaGGTTGGCGGAAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: AVQKDWKGRLKSLVGAEGSRCSR*VGGRAG
Trigger: TCCAGCTCTTCCGCCAACCCAGCGGCTGCAGCGGCT...CCCTTCAGCCCCTACTAAACTCTTAAGCCTCCCCTTCCAGTCTTTCTGGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp CAGGCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTGCACTAAAAACTCACCTGGCCGTAGGACATaGGATAAGAGGCTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: QARGLSADFGERRCTKNSPGRRT*DKRLLR
Trigger: CCGCAGCAGCCTCTTATCCCATGTCCTACGGCCAGG...TGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp AAATTAAAGTGTTGGGCTCAAACAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTAACGCCGGGAGGCTCTaGCCGGCAGGCGTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: KLKCWAQTADQSAEPPKANAGRL*PAGVEQ
Trigger: TTGCTCCACGCCTGCCGGCCAGAGCCTCCCGGCGTT...AGCCTTCGGAGGCTCTGCGCTCTGATCCGCTGTTTGAGCCCAACACTTTAATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp TACTGGACGAAGCGGCCAAAGCCAAAATTGATACACAGGCGCGCGGGCTCTCCGAGCCGACAGAGGAGTTaGAACTGGGTTTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: YWTKRPKPKLIHRRAGSPSRQRS*NWVWGL
Trigger: CAGGCCCCAAACCCAGTTCCAACTCCTCTGTCGGCT...CGGAGAGCCCGCGCGCCTGTGTATCAATTTTGGCTTTGGCCGCTTCGTCCAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp AACCCCCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCGAGCACGTCCAGCTGTaGACGCGTGAAGGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: NPHLCTLTCLFPPHFGYPEHVQL*TREGGA
Trigger: CGCACCACCTTCACGCGTTCACAGCTGGACGTGCTC...GGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGGGGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp AATCGAGGGCAGCTGAAGGGGCAGCAGTCTGCGCGGGAGGAACTCTTAGTGGTTCAGAGGGAGAAGATGTaGAGAGGGCAGGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: NRGQLKGQQSAREELLVVQREKM*RGQGSF
Trigger: AAAGCTGCCCTGCCCTCTTCACATCTTCTCCCTCTG...AACCACTAAGAGTTCCTCCCGCGCAGACTGCTGCCCCTTCAGCTGCCCTCGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp CAGGCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTGCACTAAAAACTCAGGCCAAAGCCAAAATTaGTACACAGGCGCGCGGGCT +
Preference number: 4 (lower is better)
Translates to: QARGLSADFGERRCTKNSGQSQN*YTGARA
Trigger: AGCCCGCGCGCCTGTGTATCAATTTTGGCTTTGGCC...TGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp GCTGTCCAGAAAGACTGGAAGGGGAGGCTTAAGAGTTTAGTAGGGGCTGAAGGGGTTCCGCTCCCGCTCTaGTGCTGCTGGCGGCATTTG +
Preference number: 4 (lower is better)
Translates to: AVQKDWKGRLKSLVGAEGVPLPL*CCWRHL
Trigger: CAAATGCCGCCAGCAGCAGCAGAGCGGGAGCGGAAC...CCCTTCAGCCCCTACTAAACTCTTAAGCCTCCCCTTCCAGTCTTTCTGGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp ATTGGCCACTGCTTTCGGAGCCCGAGCTCTCCCGCACTGGAGAGGACTTCTTCTGCAGCTACGGAGCGCTaGATACACGAGGTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: IGHCFRSPSSPALERTSSAATER*IHEVLL
Trigger: TAGCAACACCTCGTGTATGCAGCGCTCCGTAGCTGC...AGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCGGGCTCCGAAAGCAGTGGCCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR GCA 90 bp AACCCCCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCGGCAAAGGCGGGCGGTaGAGCAGCAGCAACAGGATC +
Preference number: 4 (lower is better)
Translates to: NPHLCTLTCLFPPHFGYPGKGGR*SSSNRI
Trigger: GATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTGCC...GGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGGGGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp TCAGTTTTGGAGAAGACGAGGCAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATGAAGGGGCAGCAGTCTaGGCGGGAGGAACTCTTAGT +
Preference number: 4 (lower is better)
Translates to: SVLEKTRQRRAVQQQQQDEGAAV*AGGTLS
Trigger: ACTAAGAGTTCCTCCCGCGCAGACTGCTGCCCCTTC...ATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTGCCTCGTCTTCTCCAAAACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp CAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTGCAAGTGCTTAATAGCTGTCCAGAAGGGGCAGCAGTCTaGGCGGGAGGAACTCTTAGT +
Preference number: 4 (lower is better)
Translates to: QRIRAQSLRRLQVLNSCPEGAAV*AGGTLS
Trigger: ACTAAGAGTTCCTCCCGCGCAGACTGCTGCCCCTTC...TGGACAGCTATTAAGCACTTGCAGCCTTCGGAGGCTCTGCGCTCTGATCCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp GCTGTCCAGAAAGACTGGAAGGGGAGGCTTAAGAGTTTAGTAGGGGCTGAAGGGGGAACTGCGACCCTGTaGTTAGACCGGGTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: AVQKDWKGRLKSLVGAEGGTATL*LDRVRG
Trigger: CCCCCTCACCCGGTCTAAGCACAGGGTCGCAGTTCC...CCCTTCAGCCCCTACTAAACTCTTAAGCCTCCCCTTCCAGTCTTTCTGGACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp TCTGTTTCCTCCACACTTCGGATATCCCGCGCCCAGCTTCCTGAAACCAAGCGGGGACTTCTTCTTGGCTaGGCGGCTCTTGGTTCCGCT +
Preference number: 4 (lower is better)
Translates to: SVSSTLRISRAQLPETKRGLLLG*AALGSA
Trigger: AGCGGAACCAAGAGCCGCCCAGCCAAGAAGAAGTCC...CCGCTTGGTTTCAGGAAGCTGGGCGCGGGATATCCGAAGTGTGGAGGAAACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp AGTGTTGGGCTCAAACAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTGCAAGTGGGTGATGTGAGTGCATaGGCGCTAGGTATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SVGLKQRIRAQSLRRLQVGDVSA*ALGMSC
Trigger: GCAGCTCATACCTAGCGCCCATGCACTCACATCACC...CACTTGCAGCCTTCGGAGGCTCTGCGCTCTGATCCGCTGTTTGAGCCCAACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp TCTGTTTCCTCCACACTTCGGATATCCCGCGCCCAGCTTCCTGAAACCAAGCGGTGGGCTCACAAGACCTaGAACCGCCATGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SVSSTLRISRAQLPETKRWAHKT*NRHEAW
Trigger: CCAAGCCTCATGGCGGTTCCAGGTCTTGTGAGCCCA...CCGCTTGGTTTCAGGAAGCTGGGCGCGGGATATCCGAAGTGTGGAGGAAACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp AATCGAGGGCAGCTGAAGGGGCAGCAGTCTGCGCGGGAGGAACTCTTAGTGGTTGTGCGGGTGCTCCAATaGGCAGAAACACGCCAGTTA +
Preference number: 4 (lower is better)
Translates to: NRGQLKGQQSAREELLVVVRVLQ*AETRQL
Trigger: TAACTGGCGTGTTTCTGCCCATTGGAGCACCCGCAC...AACCACTAAGAGTTCCTCCCGCGCAGACTGCTGCCCCTTCAGCTGCCCTCGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GGGGAAATAATACATCTCTCCTGTATAGAATGTGTAGGCCAAGCCGAAGCACCGCCCAGCGCACTCCGCTaGGGCGGAAGAAACGCCGGG +
Preference number: 4 (lower is better)
Translates to: GEIIHLSCIECVGQAEAPPSALR*GGRNAG
Trigger: CCCGGCGTTTCTTCCGCCCCAGCGGAGTGCGCTGGG...CGGTGCTTCGGCTTGGCCTACACATTCTATACAGGAGAGATGTATTATTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp CAGGCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTGCACTAAAAACTCAAGCCGACAGAGGAGTTaGAACTGGGTTTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: QARGLSADFGERRCTKNSSRQRS*NWVWGL
Trigger: CAGGCCCCAAACCCAGTTCCAACTCCTCTGTCGGCT...TGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp AACCCCCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCCCACCTCCTCCCGCATaGAGATGTCAGGGTAGCGAG +
Preference number: 4 (lower is better)
Translates to: NPHLCTLTCLFPPHFGYPPPPPA*RCQGSE
Trigger: CTCGCTACCCTGACATCTTCATGCGGGAGGAGGTGG...GGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGGGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp AACCCCCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCACACAGCTGGCGGCGTaGATTGGCCACTGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: NPHLCTLTCLFPPHFGYPTQLAA*IGHCFR
Trigger: CCGAAAGCAGTGGCCAATTCACGCCGCCAGCTGTGT...GGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGGGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp GCTGTCCAGAAAGACTGGAAGGGGAGGCTTAAGAGTTTAGTAGGGGCTGAAGGGACACAGCTGGCGGCGTaGATTGGCCACTGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: AVQKDWKGRLKSLVGAEGTQLAA*IGHCFR
Trigger: CCGAAAGCAGTGGCCAATTCACGCCGCCAGCTGTGT...CCCTTCAGCCCCTACTAAACTCTTAAGCCTCCCCTTCCAGTCTTTCTGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp GCGGAAGAAACGCCGGGAGGCTCTGGCCGGCAGGCGTGGAGCAAAATCGAGGGCCAGCTTTGCAACAACTaGAAAAGAAAAAGCGCCATT +
Preference number: 4 (lower is better)
Translates to: AEETPGGSGRQAWSKIEGQLCNN*KRKSAI
Trigger: AATGGCGCTTTTTCTTTTTCAGTTGTTGCAAAGCTG...GCCCTCGATTTTGCTCCACGCCTGCCGGCCAGAGCCTCCCGGCGTTTCTTCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp GCTGAAGGGGCAGCAGTCTGCGCGGGAGGAACTCTTAGTGGTTTTGATTTGGAGGGCCAAAGCCAAAATTaGTACACAGGCGCGCGGGCT +
Preference number: 4 (lower is better)
Translates to: AEGAAVCAGGTLSGFDLEGQSQN*YTGARA
Trigger: AGCCCGCGCGCCTGTGTATCAATTTTGGCTTTGGCC...CTCCAAATCAAAACCACTAAGAGTTCCTCCCGCGCAGACTGCTGCCCCTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp GGGGAAATAATACATCTCTCCTGTATAGAATGTGTAGGCCAAGCCGAAGCACCGTGCGGTGGCGGCGCCTaGAGCTACGGAGCGCTGCAT +
Preference number: 4 (lower is better)
Translates to: GEIIHLSCIECVGQAEAPCGGGA*SYGALH
Trigger: ATGCAGCGCTCCGTAGCTGCAGGCGCCGCCACCGCA...CGGTGCTTCGGCTTGGCCTACACATTCTATACAGGAGAGATGTATTATTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp TCAGTTTTGGAGAAGACGAGGCAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATGGAGTAGTGTGCGGGTaGTCCAATGGGCAGAAACAC +
Preference number: 4 (lower is better)
Translates to: SVLEKTRQRRAVQQQQQDGVVCG*SNGQKH
Trigger: GTGTTTCTGCCCATTGGAGCACCCGCACACTACTCC...ATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTGCCTCGTCTTCTCCAAAACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp AAATTAAAGTGTTGGGCTCAAACAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTATGCTAACAGCTGGGTaGAGGCGCCCCGACGGATCC +
Preference number: 4 (lower is better)
Translates to: KLKCWAQTADQSAEPPKAMLTAG*RRPDGS
Trigger: GGATCCGTCGGGGCGCCTCCACCCAGCTGTTAGCAT...AGCCTTCGGAGGCTCTGCGCTCTGATCCGCTGTTTGAGCCCAACACTTTAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp AACCCCCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCCAGGGTAGCGAGTCTTaGCGAAGAGCGCCTCGAGCA +
Preference number: 4 (lower is better)
Translates to: NPHLCTLTCLFPPHFGYPQGSES*RRAPRA
Trigger: TGCTCGAGGCGCTCTTCGCCAAGACTCGCTACCCTG...GGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGGGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp TACTGGACGAAGCGGCCAAAGCCAAAATTGATACACAGGCGCGCGGGCTCTCCGTTCTTGAACCAGACCTaGACTCTAGACTCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: YWTKRPKPKLIHRRAGSPFLNQT*TLDSGR
Trigger: CCTGCCGGAGTCTAGAGTCCAGGTCTGGTTCAAGAA...CGGAGAGCCCGCGCGCCTGTGTATCAATTTTGGCTTTGGCCGCTTCGTCCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GCTGAAGGGGCAGCAGTCTGCGCGGGAGGAACTCTTAGTGGTTTTGATTTGGAGGGACTTCTTCTTGGCTaGGCGGCTCTTGGTTCCGCT +
Preference number: 4 (lower is better)
Translates to: AEGAAVCAGGTLSGFDLEGLLLG*AALGSA
Trigger: AGCGGAACCAAGAGCCGCCCAGCCAAGAAGAAGTCC...CTCCAAATCAAAACCACTAAGAGTTCCTCCCGCGCAGACTGCTGCCCCTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCTTCTCCTCTTTCATTCCTaGGCTCACAAGACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: AAAATGSGPRRAQVVAFLLLFHS*AHKTWN
Trigger: GTTCCAGGTCTTGTGAGCCCAGGAATGAAAGAGGAG...AAGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR CCA 90 bp CAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTGCAAGTGCTTAATAGCTGTCCACAAGTGGCACAAAAATaGGGGCGGCAGTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: QRIRAQSLRRLQVLNSCPQVAQK*GRQCRQ
Trigger: TTGCCTGCACTGCCGCCCCCATTTTTGTGCCACTTG...TGGACAGCTATTAAGCACTTGCAGCCTTCGGAGGCTCTGCGCTCTGATCCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR CAA 72 bp GGGCAGCAGTCTGCGCGGGAGGAACTCTTAGTGGTTTaGATTTGGAGTAGTGTGCGGGTGCTCCAATGGGCA +
Preference number: 4 (lower is better)
Translates to: GQQSAREELLVV*IWSSVRVLQWA
Trigger: TGCCCATTGGAGCACCCGCACACTACTCCAAATCAAAACCACTAAGAGTTCCTCCCGCGCAGACTGCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
3UTR CAA 72 bp TTTCCCACCTACTGGACGAAGCGGCCAAAGCCAAAATaGATACACAGGCGCGCGGGCTCTCCGCAGATTTCG +
Preference number: 4 (lower is better)
Translates to: FPTYWTKRPKPK*IHRRAGSPQIS
Trigger: CGAAATCTGCGGAGAGCCCGCGCGCCTGTGTATCAATTTTGGCTTTGGCCGCTTCGTCCAGTAGGTGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp GCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTGCACTAAAAACTCACTACAGAGGGAGAAGATGTaGAGAGGGCAGGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: ARGLSADFGERRCTKNSLQREKM*RGQGSF
Trigger: AAAGCTGCCCTGCCCTCTTCACATCTTCTCCCTCTG...TAGTGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp GGGGAAATAATACATCTCTCCTGTATAGAATGTGTAGGCCAAGCCGAAGCACCGCGCCATGGAGGAGGGTaGCATGGGGCTGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GEIIHLSCIECVGQAEAPRHGGG*HGAELV
Trigger: CACCAGCTCAGCCCCATGGCACCCTCCTCCATGGCG...CGGTGCTTCGGCTTGGCCTACACATTCTATACAGGAGAGATGTATTATTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp CTCCAGATAGATGAGGCAGCTGGTGTACTCAGCGACGACGCGGCCGCCACCGGGGGTTGTTTAGGTGATTaGAAATGTAGCCTGATGAAG +
Preference number: 4 (lower is better)
Translates to: LQIDEAAGVLSDDAAATGGCLGD*KCSLMK
Trigger: CTTCATCAGGCTACATTTCCAATCACCTAAACAACC...CCCGGTGGCGGCCGCGTCGTCGCTGAGTACACCAGCTGCCTCATCTATCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CCA 90 bp CCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCGCGCCCCAACCTTGTCGGAGTaGCTTGTCTTGCTCGGTTGT +
Preference number: 4 (lower is better)
Translates to: PPLYPDLSVSSTLRISRAPTLSE*LVLLGC
Trigger: ACAACCGAGCAAGACAAGCCACTCCGACAAGGTTGG...GGCGCGGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282549.7
CDS-3UTR CCA 90 bp CAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTGCAAGTGCTTAATAGCTGTCCACGTTCACCATCTACCTaGATCTCTCACAGAGACCCG +
Preference number: 4 (lower is better)
Translates to: QRIRAQSLRRLQVLNSCPRSPST*ISHRDP
Trigger: CGGGTCTCTGTGAGAGATCCAGGTAGATGGTGAACG...TGGACAGCTATTAAGCACTTGCAGCCTTCGGAGGCTCTGCGCTCTGATCCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp CAGGCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTGCACTAAAAACTCATTCTTGAACCAGACCTaGACTCTAGACTCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: QARGLSADFGERRCTKNSFLNQT*TLDSGR
Trigger: CCTGCCGGAGTCTAGAGTCCAGGTCTGGTTCAAGAA...TGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp AATCGAGGGCAGCTGAAGGGGCAGCAGTCTGCGCGGGAGGAACTCTTAGTGGTTGCTGTCCAGAAAGACTaGAAGGGGAGGCTTAAGAGT +
Preference number: 4 (lower is better)
Translates to: NRGQLKGQQSAREELLVVAVQKD*KGRLKS
Trigger: ACTCTTAAGCCTCCCCTTCCAGTCTTTCTGGACAGC...AACCACTAAGAGTTCCTCCCGCGCAGACTGCTGCCCCTTCAGCTGCCCTCGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp GGGGAAATAATACATCTCTCCTGTATAGAATGTGTAGGCCAAGCCGAAGCACCGAGCTGGTGCGGGTGGTaGTGTGAGTGCATGGGCGCT +
Preference number: 4 (lower is better)
Translates to: GEIIHLSCIECVGQAEAPSWCGW*CECMGA
Trigger: AGCGCCCATGCACTCACATCACCACCCGCACCAGCT...CGGTGCTTCGGCTTGGCCTACACATTCTATACAGGAGAGATGTATTATTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp GCTGTCCAGAAAGACTGGAAGGGGAGGCTTAAGAGTTTAGTAGGGGCTGAAGGGGACCTGGAACCGCCATaGGGCTTGGTCCTTATAGTC +
Preference number: 4 (lower is better)
Translates to: AVQKDWKGRLKSLVGAEGDLEPP*GLVLIV
Trigger: GACTATAAGGACCAAGCCTCATGGCGGTTCCAGGTC...CCCTTCAGCCCCTACTAAACTCTTAAGCCTCCCCTTCCAGTCTTTCTGGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp TCAGTTTTGGAGAAGACGAGGCAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATAAAAGCGCCATTGATTaGGGAAGAGCAGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: SVLEKTRQRRAVQQQQQDKSAID*GRAEGG
Trigger: TCCCCCTTCTGCTCTTCCTCAATCAATGGCGCTTTT...ATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTGCCTCGTCTTCTCCAAAACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp GCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCTTAAGAAAAAGCGCCATTaGTTGAGGAAGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: AAAATGSGPRRAQVVAFLKKKRH*LRKSRR
Trigger: CCTTCTGCTCTTCCTCAATCAATGGCGCTTTTTCTT...AAGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp GAACGAAGGTGCACTAAAAACTCACTAGACAAAACAAGGGTGTTGAAAGAGAGAGTGCGCTCCCGCCGCTaGTTCCGCGGAGTGGCCGGA +
Preference number: 4 (lower is better)
Translates to: ERRCTKNSLDKTRVLKERVRSRR*FRGVAG
Trigger: TCCGGCCACTCCGCGGAAGCAGCGGCGGGAGCGCAC...TCTCTCTTTCAACACCCTTGTTTTGTCTAGTGAGTTTTTAGTGCACCTTCGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp TCAGTTTTGGAGAAGACGAGGCAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATAAATGGGGGCGGCAGTaGAGGCAATGGACATCTTTT +
Preference number: 4 (lower is better)
Translates to: SVLEKTRQRRAVQQQQQDKWGRQ*RQWTSF
Trigger: AAAAGATGTCCATTGCCTGCACTGCCGCCCCCATTT...ATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTGCCTCGTCTTCTCCAAAACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR GCA 90 bp TCAGTTTTGGAGAAGACGAGGCAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATAGAGCCTCCGAAGGCTaGAAGTGCTTAATAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SVLEKTRQRRAVQQQQQDRASEG*KCLIAV
Trigger: GACAGCTATTAAGCACTTGCAGCCTTCGGAGGCTCT...ATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTGCCTCGTCTTCTCCAAAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GGGGAAATAATACATCTCTCCTGTATAGAATGTGTAGGCCAAGCCGAAGCACCGCATCATGCTAACAGCTaGGTGGAGGCGCCCCGACGG +
Preference number: 4 (lower is better)
Translates to: GEIIHLSCIECVGQAEAPHHANS*VEAPRR
Trigger: CCGTCGGGGCGCCTCCACCCAGCTGTTAGCATGATG...CGGTGCTTCGGCTTGGCCTACACATTCTATACAGGAGAGATGTATTATTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GCTGTCCAGAAAGACTGGAAGGGGAGGCTTAAGAGTTTAGTAGGGGCTGAAGGGGAGAGGACTTCTTCTTaGCTGGGCGGCTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: AVQKDWKGRLKSLVGAEGERTSS*LGGSWF
Trigger: GAACCAAGAGCCGCCCAGCCAAGAAGAAGTCCTCTC...CCCTTCAGCCCCTACTAAACTCTTAAGCCTCCCCTTCCAGTCTTTCTGGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp TCAGTTTTGGAGAAGACGAGGCAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATCTCCTCTTTCATTCCTaGGCTCACAAGACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SVLEKTRQRRAVQQQQQDLLFHS*AHKTWN
Trigger: GTTCCAGGTCTTGTGAGCCCAGGAATGAAAGAGGAG...ATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTGCCTCGTCTTCTCCAAAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR CCA 90 bp AACCCCCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCGTGCGGGTGCTCCAATaGGCAGAAACACGCCAGTTA +
Preference number: 4 (lower is better)
Translates to: NPHLCTLTCLFPPHFGYPVRVLQ*AETRQL
Trigger: TAACTGGCGTGTTTCTGCCCATTGGAGCACCCGCAC...GGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGGGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCTTAGTTTAAGTGGTCCCTaGAACGGACCTGACTATGTA +
Preference number: 4 (lower is better)
Translates to: AAAATGSGPRRAQVVAFLSLSGP*NGPDYV
Trigger: TACATAGTCAGGTCCGTTCCAGGGACCACTTAAACT...AAGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp AAATTAAAGTGTTGGGCTCAAACAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTCCCACCTCTGTACCCTaGCTTGTCTGTTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KLKCWAQTADQSAEPPKAPTSVP*LVCFLH
Trigger: GTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGGG...AGCCTTCGGAGGCTCTGCGCTCTGATCCGCTGTTTGAGCCCAACACTTTAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp AACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTGGAACGGACCTGACTATGTACCGCTCCCGCTCTGCTaGTGCTGGCGGCATTTGGCG +
Preference number: 4 (lower is better)
Translates to: NQQQLKSLSGPWNGPDYVPLPLC*CWRHLA
Trigger: CGCCAAATGCCGCCAGCAGCAGCAGAGCGGGAGCGG...TACATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp TACTGGACGAAGCGGCCAAAGCCAAAATTGATACACAGGCGCGCGGGCTCTCCGTCCGAAGGCTGCAAGTaGTTAATAGCTGTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: YWTKRPKPKLIHRRAGSPSEGCK*LIAVQK
Trigger: TTTCTGGACAGCTATTAAGCACTTGCAGCCTTCGGA...CGGAGAGCCCGCGCGCCTGTGTATCAATTTTGGCTTTGGCCGCTTCGTCCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp AAATTAAAGTGTTGGGCTCAAACAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTGGAGTAGTGTGCGGGTaGTCCAATGGGCAGAAACAC +
Preference number: 4 (lower is better)
Translates to: KLKCWAQTADQSAEPPKAGVVCG*SNGQKH
Trigger: GTGTTTCTGCCCATTGGAGCACCCGCACACTACTCC...AGCCTTCGGAGGCTCTGCGCTCTGATCCGCTGTTTGAGCCCAACACTTTAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp GAACGAAGGTGCACTAAAAACTCACTAGACAAAACAAGGGTGTTGAAAGAGAGACGGGATGCGGCTCTGTaGGCGGAAGGCTGGGGACGC +
Preference number: 4 (lower is better)
Translates to: ERRCTKNSLDKTRVLKERRDAAL*AEGWGR
Trigger: GCGTCCCCAGCCTTCCGCGCACAGAGCCGCATCCCG...TCTCTCTTTCAACACCCTTGTTTTGTCTAGTGAGTTTTTAGTGCACCTTCGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp CAGGCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTGCACTAAAAACTCATTTGTAAACTGGAACTaGGACCCTGTGCTTAGACCG +
Preference number: 4 (lower is better)
Translates to: QARGLSADFGERRCTKNSFVNWN*DPVLRP
Trigger: CGGTCTAAGCACAGGGTCGCAGTTCCAGTTTACAAA...TGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp TCTGTTTCCTCCACACTTCGGATATCCCGCGCCCAGCTTCCTGAAACCAAGCGGTTTGTAAACTGGAACTaGGACCCTGTGCTTAGACCG +
Preference number: 4 (lower is better)
Translates to: SVSSTLRISRAQLPETKRFVNWN*DPVLRP
Trigger: CGGTCTAAGCACAGGGTCGCAGTTCCAGTTTACAAA...CCGCTTGGTTTCAGGAAGCTGGGCGCGGGATATCCGAAGTGTGGAGGAAACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp AACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTGGAACGGACCTGACTATGTAGCTAGGCGCGGCCAATaGCTCCGGCACCGACACGGA +
Preference number: 4 (lower is better)
Translates to: NQQQLKSLSGPWNGPDYVARRGQ*LRHRHG
Trigger: TCCGTGTCGGTGCCGGAGCCATTGGCCGCGCCTAGC...TACATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp AACCCCCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCTACTTTCCCACCTACTaGACGAAGCGGCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: NPHLCTLTCLFPPHFGYPYFPTY*TKRPKP
Trigger: TGGCTTTGGCCGCTTCGTCCAGTAGGTGGGAAAGTA...GGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGGGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp GGGGAAATAATACATCTCTCCTGTATAGAATGTGTAGGCCAAGCCGAAGCACCGTCCCTGGAACGGACCTaGCTATGTACAGCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: GEIIHLSCIECVGQAEAPSLERT*LCTAFP
Trigger: CGGGAACGCTGTACATAGTCAGGTCCGTTCCAGGGA...CGGTGCTTCGGCTTGGCCTACACATTCTATACAGGAGAGATGTATTATTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp TCTGTTTCCTCCACACTTCGGATATCCCGCGCCCAGCTTCCTGAAACCAAGCGGACAAAACAAGGGTGTTaGAAGAGAGAAGCCGACAGA +
Preference number: 4 (lower is better)
Translates to: SVSSTLRISRAQLPETKRTKQGC*KREADR
Trigger: TCTGTCGGCTTCTCTCTTTCAACACCCTTGTTTTGT...CCGCTTGGTTTCAGGAAGCTGGGCGCGGGATATCCGAAGTGTGGAGGAAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp ACAAATCAAATTTACAAATTACTTTCCCACCTACTGGACGAAGCGGCCAAAGCCCATGGGATAAGAGGCTaGTGCGGTGGCGGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: TNQIYKLLSHLLDEAAKAHGIRG*CGGGAC
Trigger: GCAGGCGCCGCCACCGCAGCAGCCTCTTATCCCATG...GGCTTTGGCCGCTTCGTCCAGTAGGTGGGAAAGTAATTTGTAAATTTGATTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp AATCGAGGGCAGCTGAAGGGGCAGCAGTCTGCGCGGGAGGAACTCTTAGTGGTTTTCGGAGAACGAAGGTaGACTAAAAACTCACTAGAC +
Preference number: 4 (lower is better)
Translates to: NRGQLKGQQSAREELLVVFGERR*TKNSLD
Trigger: GTCTAGTGAGTTTTTAGTGCACCTTCGTTCTCCGAA...AACCACTAAGAGTTCCTCCCGCGCAGACTGCTGCCCCTTCAGCTGCCCTCGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GCTGTCCAGAAAGACTGGAAGGGGAGGCTTAAGAGTTTAGTAGGGGCTGAAGGGCCCGTTCATGCCGTATaGGGGTTGTTTGAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: AVQKDWKGRLKSLVGAEGPVHAV*GLFEVR
Trigger: TCTTACCTCAAACAACCCCCATACGGCATGAACGGG...CCCTTCAGCCCCTACTAAACTCTTAAGCCTCCCCTTCCAGTCTTTCTGGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp CAGGCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTGCACTAAAAACTCAAGTTTAAGTGGTCCCTaGAACGGACCTGACTATGTA +
Preference number: 4 (lower is better)
Translates to: QARGLSADFGERRCTKNSSLSGP*NGPDYV
Trigger: TACATAGTCAGGTCCGTTCCAGGGACCACTTAAACT...TGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp ACCAACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTGGAACGGACCTGACTATCCGCGCCCAGCTTCCTaGAACCAAGCGGTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: TNQQQLKSLSGPWNGPDYPRPAS*NQAVLF
Trigger: GAAGAGAACCGCTTGGTTTCAGGAAGCTGGGCGCGG...ATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp AAATTAAAGTGTTGGGCTCAAACAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTGAGGGCGCAGGTAGTTaGGTTTCTTCTCCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: KLKCWAQTADQSAEPPKAEGAGS*VSSPLS
Trigger: TGAAAGAGGAGAAGAAACGCAACTACCTGCGCCCTC...AGCCTTCGGAGGCTCTGCGCTCTGATCCGCTGTTTGAGCCCAACACTTTAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp GGAAGTAATGTAGATAAAGAGGAGGAGGGGGACTGCCTTACATTTCAACAAGTAGGAACTGCGACCCTGTaGTTAGACCGGGTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GSNVDKEEEGDCLTFQQVGTATL*LDRVRG
Trigger: CCCCCTCACCCGGTCTAAGCACAGGGTCGCAGTTCC...TACTTGTTGAAATGTAAGGCAGTCCCCCTCCTCCTCTTTATCTACATTACTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp ACAAATCAAATTTACAAATTACTTTCCCACCTACTGGACGAAGCGGCCAAAGCCTCTGGCCGGCAGGCGTaGAGCAAAATCGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TNQIYKLLSHLLDEAAKASGRQA*SKIEGS
Trigger: GCTGCCCTCGATTTTGCTCCACGCCTGCCGGCCAGA...GGCTTTGGCCGCTTCGTCCAGTAGGTGGGAAAGTAATTTGTAAATTTGATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp CCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCGCGCCCAGCTTTGCAACAACTaGAAAAGAAAAAGCGCCATT +
Preference number: 4 (lower is better)
Translates to: PPLYPDLSVSSTLRISRAQLCNN*KRKSAI
Trigger: AATGGCGCTTTTTCTTTTTCAGTTGTTGCAAAGCTG...GGCGCGGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp CAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTGCAAGTGCTTAATAGCTGTCCAGGTTGTTTAGGTGATTaGAAATGTAGCCTGATGAAG +
Preference number: 4 (lower is better)
Translates to: QRIRAQSLRRLQVLNSCPGCLGD*KCSLMK
Trigger: CTTCATCAGGCTACATTTCCAATCACCTAAACAACC...TGGACAGCTATTAAGCACTTGCAGCCTTCGGAGGCTCTGCGCTCTGATCCGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282549.7
CDS-3UTR CCA 90 bp GAACGAAGGTGCACTAAAAACTCACTAGACAAAACAAGGGTGTTGAAAGAGAGACATCATGCTAACAGCTaGGTGGAGGCGCCCCGACGG +
Preference number: 4 (lower is better)
Translates to: ERRCTKNSLDKTRVLKERHHANS*VEAPRR
Trigger: CCGTCGGGGCGCCTCCACCCAGCTGTTAGCATGATG...TCTCTCTTTCAACACCCTTGTTTTGTCTAGTGAGTTTTTAGTGCACCTTCGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp GAACGAAGGTGCACTAAAAACTCACTAGACAAAACAAGGGTGTTGAAAGAGAGACCACCTCCTCCCGCATaGAGATGTCAGGGTAGCGAG +
Preference number: 4 (lower is better)
Translates to: ERRCTKNSLDKTRVLKERPPPPA*RCQGSE
Trigger: CTCGCTACCCTGACATCTTCATGCGGGAGGAGGTGG...TCTCTCTTTCAACACCCTTGTTTTGTCTAGTGAGTTTTTAGTGCACCTTCGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp GGGGAAATAATACATCTCTCCTGTATAGAATGTGTAGGCCAAGCCGAAGCACCGAGAGCCTCCGAAGGCTaGAAGTGCTTAATAGCTGTC +
Preference number: 4 (lower is better)
Translates to: GEIIHLSCIECVGQAEAPRASEG*KCLIAV
Trigger: GACAGCTATTAAGCACTTGCAGCCTTCGGAGGCTCT...CGGTGCTTCGGCTTGGCCTACACATTCTATACAGGAGAGATGTATTATTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GGGGAAATAATACATCTCTCCTGTATAGAATGTGTAGGCCAAGCCGAAGCACCGGCTGTCCAGAAAGACTaGAAGGGGAGGCTTAAGAGT +
Preference number: 4 (lower is better)
Translates to: GEIIHLSCIECVGQAEAPAVQKD*KGRLKS
Trigger: ACTCTTAAGCCTCCCCTTCCAGTCTTTCTGGACAGC...CGGTGCTTCGGCTTGGCCTACACATTCTATACAGGAGAGATGTATTATTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp GTGCTAAGACAAGATATGTTCAGTTCAACCAACCAACAGCAACTAAAAAGTTTAAGGGTGCCATGGGGCTaGGCTGGTGCGGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: VLRQDMFSSTNQQQLKSLRVPWG*AGAGGD
Trigger: ATCACCACCCGCACCAGCTCAGCCCCATGGCACCCT...TAAACTTTTTAGTTGCTGTTGGTTGGTTGAACTGAACATATCTTGTCTTAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp GGAAGTAATGTAGATAAAGAGGAGGAGGGGGACTGCCTTACATTTCAACAAGTAGACCTGGAACCGCCATaGGGCTTGGTCCTTATAGTC +
Preference number: 4 (lower is better)
Translates to: GSNVDKEEEGDCLTFQQVDLEPP*GLVLIV
Trigger: GACTATAAGGACCAAGCCTCATGGCGGTTCCAGGTC...TACTTGTTGAAATGTAAGGCAGTCCCCCTCCTCCTCTTTATCTACATTACTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GAACGAAGGTGCACTAAAAACTCACTAGACAAAACAAGGGTGTTGAAAGAGAGACGAGCTCTCCCGCACTaGAGAGGACTTCTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: ERRCTKNSLDKTRVLKERRALPH*RGLLLG
Trigger: GCCAAGAAGAAGTCCTCTCCAGTGCGGGAGAGCTCG...TCTCTCTTTCAACACCCTTGTTTTGTCTAGTGAGTTTTTAGTGCACCTTCGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GTGCTAAGACAAGATATGTTCAGTTCAACCAACCAACAGCAACTAAAAAGTTTAAGCCGCTGCAGCCGCTaGGTTGGCGGAAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: VLRQDMFSSTNQQQLKSLSRCSR*VGGRAG
Trigger: TCCAGCTCTTCCGCCAACCCAGCGGCTGCAGCGGCT...TAAACTTTTTAGTTGCTGTTGGTTGGTTGAACTGAACATATCTTGTCTTAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp ACAAATCAAATTTACAAATTACTTTCCCACCTACTGGACGAAGCGGCCAAAGCCGGTGATGTGAGTGCATaGGCGCTAGGTATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TNQIYKLLSHLLDEAAKAGDVSA*ALGMSC
Trigger: GCAGCTCATACCTAGCGCCCATGCACTCACATCACC...GGCTTTGGCCGCTTCGTCCAGTAGGTGGGAAAGTAATTTGTAAATTTGATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp GAACGAAGGTGCACTAAAAACTCACTAGACAAAACAAGGGTGTTGAAAGAGAGAGCAGCTACGGAGCGCTaGATACACGAGGTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: ERRCTKNSLDKTRVLKERAATER*IHEVLL
Trigger: TAGCAACACCTCGTGTATGCAGCGCTCCGTAGCTGC...TCTCTCTTTCAACACCCTTGTTTTGTCTAGTGAGTTTTTAGTGCACCTTCGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GAACGAAGGTGCACTAAAAACTCACTAGACAAAACAAGGGTGTTGAAAGAGAGAGAGAGGACTTCTTCTTaGCTGGGCGGCTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: ERRCTKNSLDKTRVLKERERTSS*LGGSWF
Trigger: GAACCAAGAGCCGCCCAGCCAAGAAGAAGTCCTCTC...TCTCTCTTTCAACACCCTTGTTTTGTCTAGTGAGTTTTTAGTGCACCTTCGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp AACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTGGAACGGACCTGACTATGTATACTTTCCCACCTACTaGACGAAGCGGCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: NQQQLKSLSGPWNGPDYVYFPTY*TKRPKP
Trigger: TGGCTTTGGCCGCTTCGTCCAGTAGGTGGGAAAGTA...TACATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp ACAAATCAAATTTACAAATTACTTTCCCACCTACTGGACGAAGCGGCCAAAGCCAAATGGGGGCGGCAGTaGAGGCAATGGACATCTTTT +
Preference number: 4 (lower is better)
Translates to: TNQIYKLLSHLLDEAAKAKWGRQ*RQWTSF
Trigger: AAAAGATGTCCATTGCCTGCACTGCCGCCCCCATTT...GGCTTTGGCCGCTTCGTCCAGTAGGTGGGAAAGTAATTTGTAAATTTGATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp ACAAATCAAATTTACAAATTACTTTCCCACCTACTGGACGAAGCGGCCAAAGCCCTCCTCTTTCATTCCTaGGCTCACAAGACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: TNQIYKLLSHLLDEAAKALLFHS*AHKTWN
Trigger: GTTCCAGGTCTTGTGAGCCCAGGAATGAAAGAGGAG...GGCTTTGGCCGCTTCGTCCAGTAGGTGGGAAAGTAATTTGTAAATTTGATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GAACGAAGGTGCACTAAAAACTCACTAGACAAAACAAGGGTGTTGAAAGAGAGACCCGTTCATGCCGTATaGGGGTTGTTTGAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: ERRCTKNSLDKTRVLKERPVHAV*GLFEVR
Trigger: TCTTACCTCAAACAACCCCCATACGGCATGAACGGG...TCTCTCTTTCAACACCCTTGTTTTGTCTAGTGAGTTTTTAGTGCACCTTCGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR GCA 90 bp ACCAACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTGGAACGGACCTGACTATTTCGGAGAACGAAGGTaGACTAAAAACTCACTAGAC +
Preference number: 4 (lower is better)
Translates to: TNQQQLKSLSGPWNGPDYFGERR*TKNSLD
Trigger: GTCTAGTGAGTTTTTAGTGCACCTTCGTTCTCCGAA...ATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR TCA 90 bp GTGCTAAGACAAGATATGTTCAGTTCAACCAACCAACAGCAACTAAAAAGTTTAAAAAGCGCCATTGATTaGGGAAGAGCAGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: VLRQDMFSSTNQQQLKSLKSAID*GRAEGG
Trigger: TCCCCCTTCTGCTCTTCCTCAATCAATGGCGCTTTT...TAAACTTTTTAGTTGCTGTTGGTTGGTTGAACTGAACATATCTTGTCTTAGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CCA 90 bp GTGCTAAGACAAGATATGTTCAGTTCAACCAACCAACAGCAACTAAAAAGTTTATTTAGGTTTGTAAACTaGAACTGCGACCCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: VLRQDMFSSTNQQQLKSLFRFVN*NCDPVL
Trigger: AAGCACAGGGTCGCAGTTCCAGTTTACAAACCTAAA...TAAACTTTTTAGTTGCTGTTGGTTGGTTGAACTGAACATATCTTGTCTTAGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS GCA 90 bp CGGCCTGAGGTCGGGAGCGCCTCAGCTGCGGCCAGCGTCCTTCGTTaGCAGCGCGCACCCGGCCTTCTCTCTGCCCAGTCTGGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: RPEVGSASAAASVLR*QRAPGLLSAQSGLR
Trigger: CCGCAGCCCAGACTGGGCAGAGAGAAGGCCGGGTGCGCGCTGGCAACGAAGGACGCTGGCCGCAGCTGAGGCGCTCCCGACCTCAGGCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476383.1
CDS CCA 90 bp AACAGAGAACTAGGCCTCAGCGGCGTAGCCCACGCAGACCCGAGCTaGGAGGTCGAAGCCTCGCCCCCGCCGCTGCCGGGAACCCGGGGT +
Preference number: 5 (lower is better)
Translates to: NRELGLSGVAHADPS*EVEASPPPLPGTRG
Trigger: ACCCCGGGTTCCCGGCAGCGGCGGGGGCGAGGCTTCGACCTCCCAGCTCGGGTCTGCGTGGGCTACGCCGCTGAGGCCTAGTTCTCTGTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476383.1
CDS-3UTR CAA 90 bp GAGGCAGCTGGTGTACTCAGCGACGACGCGGCCGCCACCGGGTTCCCACCTAGTGCTGCAGCCGCTGGGTaGGCGGAAGAGCTGGACGCC +
Preference number: 5 (lower is better)
Translates to: EAAGVLSDDAAATGFPPSAAAAG*AEELDA
Trigger: GGCGTCCAGCTCTTCCGCCAACCCAGCGGCTGCAGC...ACTAGGTGGGAACCCGGTGGCGGCCGCGTCGTCGCTGAGTACACCAGCTGCCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS CCA 90 bp GGGGCCTGGCCTGCCCTCAGCTGCCGGGGCCGTTCACCATCTACCTaGATCTCTCACAGAGACCCGCCGGGCAGCCAACCTGCTTGCTCG +
Preference number: 5 (lower is better)
Translates to: GAWPALSCRGRSPST*ISHRDPPGSQPACS
Trigger: CGAGCAAGCAGGTTGGCTGCCCGGCGGGTCTCTGTGAGAGATCCAGGTAGATGGTGAACGGCCCCGGCAGCTGAGGGCAGGCCAGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366671.7
CDS-3UTR CAA 90 bp GCGCTGCATACACGAGGTGTTGCTAGGCGCGGCCAATGGCTCCGGCACCGACACGGGCGTAGGGTAGCCTaGGCCGTAGCTGCCGCCCTG +
Preference number: 5 (lower is better)
Translates to: ALHTRGVARRGQWLRHRHGRRVA*AVAAAL
Trigger: CAGGGCGGCAGCTACGGCCAAGGCTACCCTACGCCC...GTGTCGGTGCCGGAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS CCA 90 bp GGGGCCTGGCCTGCCCTCAGCTGCCGGGGCCGTTCACCATCTACCTaGATCTCTCACAGAGACCCGCCGGGCAGCCAACCTTGTCGGAGT +
Preference number: 5 (lower is better)
Translates to: GAWPALSCRGRSPST*ISHRDPPGSQPCRS
Trigger: ACTCCGACAAGGTTGGCTGCCCGGCGGGTCTCTGTGAGAGATCCAGGTAGATGGTGAACGGCCCCGGCAGCTGAGGGCAGGCCAGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000405984.8
CDS-3UTR CAA 90 bp GCTACGGAGCGCTGCATACACGAGGTGTTGCTAGGCGCGGCCAATGGCTCCGGCTTGGCTGGGCGGCTCTaGGTTCCGCTCCCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: ATERCIHEVLLGAANGSGLAGRL*VPLPLC
Trigger: GCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCAA...GCCGGAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCGCTCCGTAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CAA 90 bp CAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGAGCTGGCGGCGTGAATaGGCCACTGCTTTCGGAGCC +
Preference number: 5 (lower is better)
Translates to: QRRAVQQQQQDRDHGGRRSWRRE*ATAFGA
Trigger: GGCTCCGAAAGCAGTGGCCAATTCACGCCGCCAGCT...CCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR CAA 90 bp ACAGCGTTCCCGCCGAGGCGGAAGCTTGAACCAGTCCAGCGCAGGGCGGGGCGGTGCATACACGAGGTGTaGCTAGGCGCGGCCAATGGC +
Preference number: 5 (lower is better)
Translates to: TAFPPRRKLEPVQRRAGRCIHEV*LGAANG
Trigger: GCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCA...CCGCCCCGCCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGCGGGAACGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp ACAGCGTTCCCGCCGAGGCGGAAGCTTGAACCAGTCCAGCGCAGGGCGGGGCGGAGAGCCACCGTAGCCTaGGTGGTGGTGGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: TAFPPRRKLEPVQRRAGRRATVA*VVVVVM
Trigger: CATCACCACCACCACCACCAAGGCTACGGTGGCTCT...CCGCCCCGCCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGCGGGAACGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS CCA 90 bp GGGACTCGGGCTGCCCTCAGCTGCCGGGGCCGTTCACCATCTACCTaGATCTCTCACAGAGACCCGCCGGGCAGCCAACCTTGTCGGAGT +
Preference number: 5 (lower is better)
Translates to: GTRAALSCRGRSPST*ISHRDPPGSQPCRS
Trigger: ACTCCGACAAGGTTGGCTGCCCGGCGGGTCTCTGTGAGAGATCCAGGTAGATGGTGAACGGCCCCGGCAGCTGAGGGCAGCCCGAGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476383.1
CDS-3UTR CAA 90 bp CAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGCGGCCAAAGCCAAAATaGATACACAGGCGCGCGGGC +
Preference number: 5 (lower is better)
Translates to: QRRAVQQQQQDRDHGGRRRPKPK*IHRRAG
Trigger: GCCCGCGCGCCTGTGTATCAATTTTGGCTTTGGCCG...CCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS CCA 90 bp CCTGGCCACCTCACACGCCCACGACTCTGCCCCATGCGCCGGCAGTaGGCCCTGTATTGTAAACAGACAGTGGGCCCTGTGTTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: PGHLTRPRLCPMRRQ*ALYCKQTVGPVLQP
Trigger: CGGCTGCAACACAGGGCCCACTGTCTGTTTACAATACAGGGCCCACTGCCGGCGCATGGGGCAGAGTCGTGGGCGTGTGAGGTGGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS TCA 90 bp AGCTCTGCGCTGGCGGTGGGACCACAACCGGAGAAAGGTTGCCGGTaGTCCGGCCGGGAAGGCGCATATTGCGCGTTTTCTCAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: SSALAVGPQPEKGCR*SGREGAYCAFSQPW
Trigger: CCAGGGCTGAGAAAACGCGCAATATGCGCCTTCCCGGCCGGATCACCGGCAACCTTTCTCCGGTTGTGGTCCCACCGCCAGCGCAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS-3UTR CAA 90 bp TTCTTCTTGGCTGGGCGGCTCTTGGTTCCGCTCCCGCTCTGCTGCTGCTGGCGGCTAGACTCCGGCAGGTaGATCTTGAGCGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: FFLAGRLLVPLPLCCCWRLDSGR*ILSATS
Trigger: GGAGGTGGCGCTCAAGATCAACCTGCCGGAGTCTAG...CCGCCAGCAGCAGCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCAAGAAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CAA 90 bp GCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCTTTTGGCTGGGCGGCTCTaGGTTCCGCTCCCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: AAAATGSGPRRAQVVAFLLAGRL*VPLPLC
Trigger: GCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCAA...AAGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR CAA 90 bp CTCCAGATAGATGAGGCAGCTGGTGTACTCAGCGACGACGCGGCCGCCACCGGGAGAGCCACCGTAGCCTaGGTGGTGGTGGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: LQIDEAAGVLSDDAAATGRATVA*VVVVVM
Trigger: CATCACCACCACCACCACCAAGGCTACGGTGGCTCT...CCCGGTGGCGGCCGCGTCGTCGCTGAGTACACCAGCTGCCTCATCTATCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CAA 90 bp CAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTCGGGGGAGTTGAAGTaGAGTTTCCAGGCGGAGGAA +
Preference number: 5 (lower is better)
Translates to: QRRAVQQQQQDRDHGGRRSGELK*SFQAEE
Trigger: TTCCTCCGCCTGGAAACTCAACTTCAACTCCCCCGA...CCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS GCA 90 bp GTTTTCTCAGCCCTGGCCACCTCACACGCCCACGACTCTGCCCCATaGGCCGGCAGTGGGCCCTGTATTGTAAACAGACAGTGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: VFSALATSHAHDSAP*AGSGPCIVNRQWAL
Trigger: CAGGGCCCACTGTCTGTTTACAATACAGGGCCCACTGCCGGCGCATGGGGCAGAGTCGTGGGCGTGTGAGGTGGCCAGGGCTGAGAAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CCA 90 bp AGTTGGGAGGTGGCTCGGCGTTGCCGCGGCACTCCCGGTGCAACGTaGAGGCAGTGGGGACTGGGAAGTCCTGCAGAGTCACTTTGCAAA +
Preference number: 5 (lower is better)
Translates to: SWEVARRCRGTPGAT*RQWGLGSPAESLCK
Trigger: TTTGCAAAGTGACTCTGCAGGACTTCCCAGTCCCCACTGCCTCCACGTTGCACCGGGAGTGCCGCGGCAACGCCGAGCCACCTCCCAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CCA 90 bp TCTGCCCCATGCGCCGGCAGTGGGCCCTGTATTGTAAACAGACAGTaGGCCCTGTGTTGCAGCCGGCTCCCTGGGCCTGCTCAGCAACAA +
Preference number: 5 (lower is better)
Translates to: SAPCAGSGPCIVNRQ*ALCCSRLPGPAQQQ
Trigger: TTGTTGCTGAGCAGGCCCAGGGAGCCGGCTGCAACACAGGGCCCACTGTCTGTTTACAATACAGGGCCCACTGCCGGCGCATGGGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS-3UTR CAA 90 bp GGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTGCCGGGCAGCCAACCTaGTCGGAGTGGCTTGTCTTG +
Preference number: 5 (lower is better)
Translates to: GAAAATGSGPRRAQVVAFAGQPT*SEWLVL
Trigger: CAAGACAAGCCACTCCGACAAGGTTGGCTGCCCGGC...AAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000405984.8
CDS-3UTR CAA 90 bp ACAGTCGGGGGAGTTGAAGTTGAGTTTCCAGGCGGAGGAAGCAGCAGCGGCGCCGCCGGGCAGCCAACCTaGTCGGAGTGGCTTGTCTTG +
Preference number: 5 (lower is better)
Translates to: TVGGVEVEFPGGGSSSGAAGQPT*SEWLVL
Trigger: CAAGACAAGCCACTCCGACAAGGTTGGCTGCCCGGC...GGCGCCGCTGCTGCTTCCTCCGCCTGGAAACTCAACTTCAACTCCCCCGACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CAA 90 bp GCGCTGCATACACGAGGTGTTGCTAGGCGCGGCCAATGGCTCCGGCACCGACACGGAGAGGACTTCTTCTaGGCTGGGCGGCTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: ALHTRGVARRGQWLRHRHGEDFF*AGRLLV
Trigger: AACCAAGAGCCGCCCAGCCAAGAAGAAGTCCTCTCC...GTGTCGGTGCCGGAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CAA 90 bp GCTACGGAGCGCTGCATACACGAGGTGTTGCTAGGCGCGGCCAATGGCTCCGGCAAGCAGTCGGCAGAGTaGAAGGCAAGCCCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: ATERCIHEVLLGAANGSGKQSAE*KASPEP
Trigger: TGGCTCTGGGCTTGCCTTCAACTCTGCCGACTGCTT...GCCGGAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCGCTCCGTAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CAA 90 bp ACAGCGTTCCCGCCGAGGCGGAAGCTTGAACCAGTCCAGCGCAGGGCGGGGCGGCCTCTGTACCCTGACTaGTCTGTTTCCTCCACACTT +
Preference number: 5 (lower is better)
Translates to: TAFPPRRKLEPVQRRAGRPLYPD*SVSSTL
Trigger: AAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGG...CCGCCCCGCCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGCGGGAACGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp CAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGCCCCACCAAGGGTGTTaGCAAGTCTTAAGCGCTTCT +
Preference number: 5 (lower is better)
Translates to: QRRAVQQQQQDRDHGGRRPHQGC*QVLSAS
Trigger: AGAAGCGCTTAAGACTTGCAAACACCCTTGGTGGGG...CCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366671.7
CDS CCA 90 bp TTCTCCTTACCTGCCCTCAGCTGCCGGGGCCGTTCACCATCTACCTaGATCTCTCACAGAGACCCGCCGGGCAGCCAACCTTGTCGGAGT +
Preference number: 5 (lower is better)
Translates to: FSLPALSCRGRSPST*ISHRDPPGSQPCRS
Trigger: ACTCCGACAAGGTTGGCTGCCCGGCGGGTCTCTGTGAGAGATCCAGGTAGATGGTGAACGGCCCCGGCAGCTGAGGGCAGGTAAGGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477348.1
CDS-3UTR CAA 90 bp TCAGTTTTGGAGAAGACGAGGCAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATCGCCGAGGCGGAAGCTaGAACCAGTCCAGCGCAGGG +
Preference number: 5 (lower is better)
Translates to: SVLEKTRQRRAVQQQQQDRRGGS*NQSSAG
Trigger: CCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGCG...ATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTGCCTCGTCTTCTCCAAAACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS GCA 90 bp GCCGGCAGTGGGCCCTGTATTGTAAACAGACAGTGGGCCCTGTGTTaGAGCCGGCTCCCTGGGCCTGCTCAGCAACAAAGCTTGCACTCA +
Preference number: 5 (lower is better)
Translates to: AGSGPCIVNRQWALC*SRLPGPAQQQSLHS
Trigger: TGAGTGCAAGCTTTGTTGCTGAGCAGGCCCAGGGAGCCGGCTGCAACACAGGGCCCACTGTCTGTTTACAATACAGGGCCCACTGCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS GCA 90 bp ATTGCGCGTTTTCTCAGCCCTGGCCACCTCACACGCCCACGACTCTaGCCCATGCGCCGGCAGTGGGCCCTGTATTGTAAACAGACAGTG +
Preference number: 5 (lower is better)
Translates to: IARFLSPGHLTRPRL*PMRRQWALYCKQTV
Trigger: CACTGTCTGTTTACAATACAGGGCCCACTGCCGGCGCATGGGGCAGAGTCGTGGGCGTGTGAGGTGGCCAGGGCTGAGAAAACGCGCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS-3UTR CAA 90 bp TACTGGACGAAGCGGCCAAAGCCAAAATTGATACACAGGCGCGCGGGCTCTCCGAGCTGGCGGCGTGAATaGGCCACTGCTTTCGGAGCC +
Preference number: 5 (lower is better)
Translates to: YWTKRPKPKLIHRRAGSPSWRRE*ATAFGA
Trigger: GGCTCCGAAAGCAGTGGCCAATTCACGCCGCCAGCT...CGGAGAGCCCGCGCGCCTGTGTATCAATTTTGGCTTTGGCCGCTTCGTCCAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp AACCCCCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCGCTGCAGCCGCTGGGTaGGCGGAAGAGCTGGACGCC +
Preference number: 5 (lower is better)
Translates to: NPHLCTLTCLFPPHFGYPAAAAG*AEELDA
Trigger: GGCGTCCAGCTCTTCCGCCAACCCAGCGGCTGCAGC...GGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGGGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp GCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCTTTGCATACACGAGGTGTaGCTAGGCGCGGCCAATGGC +
Preference number: 5 (lower is better)
Translates to: AAAATGSGPRRAQVVAFLCIHEV*LGAANG
Trigger: GCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCA...AAGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS-3UTR CAA 90 bp GGAAGAAACGCCGGGAGGCTCTGGCCGGCAGGCGTGGAGCAAAATCGAGGGCAGGAGTTGGAACTGGGTTaGGGGCCTGGGTTTGTTTGT +
Preference number: 5 (lower is better)
Translates to: GRNAGRLWPAGVEQNRGQELELG*GPGFVC
Trigger: ACAAACAAACCCAGGCCCCAAACCCAGTTCCAACTC...CTGCCCTCGATTTTGCTCCACGCCTGCCGGCCAGAGCCTCCCGGCGTTTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp GCTGAAGGGGCAGCAGTCTGCGCGGGAGGAACTCTTAGTGGTTTTGATTTGGAGGGGCAGCCAACCTGCTaGCTCGTCGGCATCTCCCGG +
Preference number: 5 (lower is better)
Translates to: AEGAAVCAGGTLSGFDLEGQPTC*LVGISR
Trigger: CCGGGAGATGCCGACGAGCAAGCAGGTTGGCTGCCC...CTCCAAATCAAAACCACTAAGAGTTCCTCCCGCGCAGACTGCTGCCCCTTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366671.7
CDS CCA 90 bp CCTGGGCCTGCTCAGCAACAAAGCTTGCACTCAAATCCAACAGTCTaGGGGTCCCCAACATTTGAGAGGCTGAGGCAGGGTCGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: PGPAQQQSLHSNPTV*GSPTFERLRQGREG
Trigger: GCCCTCCCGACCCTGCCTCAGCCTCTCAAATGTTGGGGACCCCCAGACTGTTGGATTTGAGTGCAAGCTTTGTTGCTGAGCAGGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS-3UTR CAA 90 bp TACTGGACGAAGCGGCCAAAGCCAAAATTGATACACAGGCGCGCGGGCTCTCCGAGAGCCACCGTAGCCTaGGTGGTGGTGGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: YWTKRPKPKLIHRRAGSPRATVA*VVVVVM
Trigger: CATCACCACCACCACCACCAAGGCTACGGTGGCTCT...CGGAGAGCCCGCGCGCCTGTGTATCAATTTTGGCTTTGGCCGCTTCGTCCAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp TGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCTAAGCAGTCGGCAGAGTaGAAGGCAAGCCCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: CSSSNRIGTTEGAGSCVSKQSAE*KASPEP
Trigger: TGGCTCTGGGCTTGCCTTCAACTCTGCCGACTGCTT...AGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS GCA 90 bp ACCATCTACCTGGATCTCTCACAGAGACCCGCCGGGCAGCCAACCTaGAAAACAGAGCAGCACTGGAATTACCCTGGCGGCTGGTCTAGG +
Preference number: 5 (lower is better)
Translates to: TIYLDLSQRPAGQPT*KTEQHWNYPGGWSR
Trigger: CCTAGACCAGCCGCCAGGGTAATTCCAGTGCTGCTCTGTTTTGCAGGTTGGCTGCCCGGCGGGTCTCTGTGAGAGATCCAGGTAGATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS GCA 90 bp CCCTGTGTTGCAGCCGGCTCCCTGGGCCTGCTCAGCAACAAAGCTTaGACTCAAATCCAACAGTCTGGGGGTCCCCAACATTTGAGAGGC +
Preference number: 5 (lower is better)
Translates to: PCVAAGSLGLLSNKA*TQIQQSGGPQHLRG
Trigger: GCCTCTCAAATGTTGGGGACCCCCAGACTGTTGGATTTGAGTGCAAGCTTTGTTGCTGAGCAGGCCCAGGGAGCCGGCTGCAACACAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS GCA 90 bp AATACTAGCCGCCCCTGGGTAGCGAATCCGCAAGTAAATGAGCTCTaGGCTGGCGGTGGGACCACAACCGGAGAAAGGTTGCCGGTGATC +
Preference number: 5 (lower is better)
Translates to: NTSRPWVANPQVNEL*AGGGTTTGERLPVI
Trigger: GATCACCGGCAACCTTTCTCCGGTTGTGGTCCCACCGCCAGCGCAGAGCTCATTTACTTGCGGATTCGCTACCCAGGGGCGGCTAGTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CCA 90 bp GTGGCTCGGCGTTGCCGCGGCACTCCCGGTGCAACGTGGAGGCAGTaGGGACTGGGAAGTCCTGCAGAGTCACTTTGCAAACTAAATAAA +
Preference number: 5 (lower is better)
Translates to: VARRCRGTPGATWRQ*GLGSPAESLCKLNK
Trigger: TTTATTTAGTTTGCAAAGTGACTCTGCAGGACTTCCCAGTCCCCACTGCCTCCACGTTGCACCGGGAGTGCCGCGGCAACGCCGAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CCA 90 bp TCACAGAGACCCGCCGGGCAGCCAACCTGCAAAACAGAGCAGCACTaGAATTACCCTGGCGGCTGGTCTAGGACCCCCAGGTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: SQRPAGQPTCKTEQH*NYPGGWSRTPRFLS
Trigger: AGAAAGAAACCTGGGGGTCCTAGACCAGCCGCCAGGGTAATTCCAGTGCTGCTCTGTTTTGCAGGTTGGCTGCCCGGCGGGTCTCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS-3UTR CAA 90 bp AAATTAAAGTGTTGGGCTCAAACAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTTTGGCTGGGCGGCTCTaGGTTCCGCTCCCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: KLKCWAQTADQSAEPPKALAGRL*VPLPLC
Trigger: GCAGAGCGGGAGCGGAACCAAGAGCCGCCCAGCCAA...AGCCTTCGGAGGCTCTGCGCTCTGATCCGCTGTTTGAGCCCAACACTTTAATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp CCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCGCGCCCGGCCAAAGCCAAAATaGATACACAGGCGCGCGGGC +
Preference number: 5 (lower is better)
Translates to: PPLYPDLSVSSTLRISRARPKPK*IHRRAG
Trigger: GCCCGCGCGCCTGTGTATCAATTTTGGCTTTGGCCG...GGCGCGGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS TCA 90 bp ACAAAGCTTGCACTCAAATCCAACAGTCTGGGGGTCCCCAACATTTaGGAGGCTGAGGCAGGGTCGGGAGGGCTGGTGCTCACCCGGATA +
Preference number: 5 (lower is better)
Translates to: TKLALKSNSLGVPNI*EAEAGSGGLVLTRI
Trigger: TATCCGGGTGAGCACCAGCCCTCCCGACCCTGCCTCAGCCTCTCAAATGTTGGGGACCCCCAGACTGTTGGATTTGAGTGCAAGCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS GCA 90 bp TGTAAACAGACAGTGGGCCCTGTGTTGCAGCCGGCTCCCTGGGCCTaGTCAGCAACAAAGCTTGCACTCAAATCCAACAGTCTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: CKQTVGPVLQPAPWA*SATKLALKSNSLGV
Trigger: GACCCCCAGACTGTTGGATTTGAGTGCAAGCTTTGTTGCTGAGCAGGCCCAGGGAGCCGGCTGCAACACAGGGCCCACTGTCTGTTTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS-3UTR CAA 90 bp ACAGTCGGGGGAGTTGAAGTTGAGTTTCCAGGCGGAGGAAGCAGCAGCGGCGCCCATGCCGTATGGGGGTaGTTTGAGGTAAGACATCAT +
Preference number: 5 (lower is better)
Translates to: TVGGVEVEFPGGGSSSGAHAVWG*FEVRHH
Trigger: ATGATGTCTTACCTCAAACAACCCCCATACGGCATG...GGCGCCGCTGCTGCTTCCTCCGCCTGGAAACTCAACTTCAACTCCCCCGACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CAA 90 bp AAATTAAAGTGTTGGGCTCAAACAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTAGCTGGCGGCGTGAATaGGCCACTGCTTTCGGAGCC +
Preference number: 5 (lower is better)
Translates to: KLKCWAQTADQSAEPPKASWRRE*ATAFGA
Trigger: GGCTCCGAAAGCAGTGGCCAATTCACGCCGCCAGCT...AGCCTTCGGAGGCTCTGCGCTCTGATCCGCTGTTTGAGCCCAACACTTTAATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp AGACCTGGAACCGCCATGAGGCTTGGTCCTTATAGTCCAGACAGTCGGGGGAGTAGACAGTCGGGGGAGTaGAAGTTGAGTTTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: RPGTAMRLGPYSPDSRGSRQSGE*KLSFQA
Trigger: CGCCTGGAAACTCAACTTCAACTCCCCCGACTGTCT...ACTCCCCCGACTGTCTGGACTATAAGGACCAAGCCTCATGGCGGTTCCAGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS-3UTR CAA 90 bp TGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCTCCTCTGTACCCTGACTaGTCTGTTTCCTCCACACTT +
Preference number: 5 (lower is better)
Translates to: CSSSNRIGTTEGAGSCVSPLYPD*SVSSTL
Trigger: AAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGG...AGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp ACCAACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTGGAACGGACCTGACTATGCTGCAGCCGCTGGGTaGGCGGAAGAGCTGGACGCC +
Preference number: 5 (lower is better)
Translates to: TNQQQLKSLSGPWNGPDYAAAAG*AEELDA
Trigger: GGCGTCCAGCTCTTCCGCCAACCCAGCGGCTGCAGC...ATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp TGCAGCAGCAGCAACAGGATCGGGACCACGGAGGGCGCAGGTAGTTGCGTTTCTGGGGCCTGGGTTTGTTaGTTTTTCCCTAATGCTGTA +
Preference number: 5 (lower is better)
Translates to: CSSSNRIGTTEGAGSCVSGAWVC*FFPNAV
Trigger: TACAGCATTAGGGAAAAACAAACAAACCCAGGCCCC...AGAAACGCAACTACCTGCGCCCTCCGTGGTCCCGATCCTGTTGCTGCTGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp AACCCCCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCAAGCCGACAGAGGAGTaGGAACTGGGTTTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: NPHLCTLTCLFPPHFGYPKPTEE*ELGLGP
Trigger: AGGCCCCAAACCCAGTTCCAACTCCTCTGTCGGCTT...GGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGGGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp GCTGTCCAGAAAGACTGGAAGGGGAGGCTTAAGAGTTTAGTAGGGGCTGAAGGGAAGCCGACAGAGGAGTaGGAACTGGGTTTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: AVQKDWKGRLKSLVGAEGKPTEE*ELGLGP
Trigger: AGGCCCCAAACCCAGTTCCAACTCCTCTGTCGGCTT...CCCTTCAGCCCCTACTAAACTCTTAAGCCTCCCCTTCCAGTCTTTCTGGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS GCA 90 bp GAAGCAGCCAGGGCTCTAGGGCCGAAGGAAAATGGGACTCAAAGCTaGGACGGCTTTGCGAAGCTGCAGCGTGAGTTTTCAAAGACTTTC +
Preference number: 5 (lower is better)
Translates to: EAARALGPKENGTQS*DGFAKLQREFSKTF
Trigger: GAAAGTCTTTGAAAACTCACGCTGCAGCTTCGCAAAGCCGTCGCAGCTTTGAGTCCCATTTTCCTTCGGCCCTAGAGCCCTGGCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477348.1
CDS CCA 90 bp CTGTATTGTAAACAGACAGTGGGCCCTGTGTTGCAGCCGGCTCCCTaGGCCTGCTCAGCAACAAAGCTTGCACTCAAATCCAACAGTCTG +
Preference number: 5 (lower is better)
Translates to: LYCKQTVGPVLQPAP*ACSATKLALKSNSL
Trigger: CAGACTGTTGGATTTGAGTGCAAGCTTTGTTGCTGAGCAGGCCCAGGGAGCCGGCTGCAACACAGGGCCCACTGTCTGTTTACAATACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS-3UTR CAA 90 bp AGTGTTGGGCTCAAACAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTGCAAGTGCATGCCGTATGGGGGTaGTTTGAGGTAAGACATCAT +
Preference number: 5 (lower is better)
Translates to: SVGLKQRIRAQSLRRLQVHAVWG*FEVRHH
Trigger: ATGATGTCTTACCTCAAACAACCCCCATACGGCATG...CACTTGCAGCCTTCGGAGGCTCTGCGCTCTGATCCGCTGTTTGAGCCCAACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp AACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTGGAACGGACCTGACTATGTAGGGCGTAGGGTAGCCTaGGCCGTAGCTGCCGCCCTG +
Preference number: 5 (lower is better)
Translates to: NQQQLKSLSGPWNGPDYVGRRVA*AVAAAL
Trigger: CAGGGCGGCAGCTACGGCCAAGGCTACCCTACGCCC...TACATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp GGAAGTAATGTAGATAAAGAGGAGGAGGGGGACTGCCTTACATTTCAACAAGTAGGGCGTAGGGTAGCCTaGGCCGTAGCTGCCGCCCTG +
Preference number: 5 (lower is better)
Translates to: GSNVDKEEEGDCLTFQQVGRRVA*AVAAAL
Trigger: CAGGGCGGCAGCTACGGCCAAGGCTACCCTACGCCC...TACTTGTTGAAATGTAAGGCAGTCCCCCTCCTCCTCTTTATCTACATTACTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp AACCCCCACCTCTGTACCCTGACTTGTCTGTTTCCTCCACACTTCGGATATCCCAGACAGTCGGGGGAGTaGAAGTTGAGTTTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: NPHLCTLTCLFPPHFGYPRQSGE*KLSFQA
Trigger: CGCCTGGAAACTCAACTTCAACTCCCCCGACTGTCT...GGGATATCCGAAGTGTGGAGGAAACAGACAAGTCAGGGTACAGAGGTGGGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp GGGGAAATAATACATCTCTCCTGTATAGAATGTGTAGGCCAAGCCGAAGCACCGCTAGACTCCGGCAGGTaGATCTTGAGCGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: GEIIHLSCIECVGQAEAPLDSGR*ILSATS
Trigger: GGAGGTGGCGCTCAAGATCAACCTGCCGGAGTCTAG...CGGTGCTTCGGCTTGGCCTACACATTCTATACAGGAGAGATGTATTATTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp CAGGCGCGCGGGCTCTCCGCAGATTTCGGAGAACGAAGGTGCACTAAAAACTCAGGGGCCTGGGTTTGTTaGTTTTTCCCTAATGCTGTA +
Preference number: 5 (lower is better)
Translates to: QARGLSADFGERRCTKNSGAWVC*FFPNAV
Trigger: TACAGCATTAGGGAAAAACAAACAAACCCAGGCCCC...TGAGTTTTTAGTGCACCTTCGTTCTCCGAAATCTGCGGAGAGCCCGCGCGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp TCAGTTTTGGAGAAGACGAGGCAAAGGCGGGCGGTGCAGCAGCAGCAACAGGATGGTGAAAATTCAGTTTaGGAGAAGACGAGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: SVLEKTRQRRAVQQQQQDGENSV*EKTRQR
Trigger: CCTTTGCCTCGTCTTCTCCAAAACTGAATTTTCACC...ATCCTGTTGCTGCTGCTGCACCGCCCGCCTTTGCCTCGTCTTCTCCAAAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
CDS GCA 90 bp GGCCGAAGGAAAATGGGACTCAAAGCTGCGACGGCTTTGCGAAGCTaGAGCGTGAGTTTTCAAAGACTTTCTCCAAACTTAGCACTTCAG +
Preference number: 5 (lower is better)
Translates to: GRRKMGLKAATALRS*SVSFQRLSPNLALQ
Trigger: CTGAAGTGCTAAGTTTGGAGAAAGTCTTTGAAAACTCACGCTGCAGCTTCGCAAAGCCGTCGCAGCTTTGAGTCCCATTTTCCTTCGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477348.1
CDS-3UTR CAA 90 bp GGAAGTAATGTAGATAAAGAGGAGGAGGGGGACTGCCTTACATTTCAACAAGTACTAGACTCCGGCAGGTaGATCTTGAGCGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: GSNVDKEEEGDCLTFQQVLDSGR*ILSATS
Trigger: GGAGGTGGCGCTCAAGATCAACCTGCCGGAGTCTAG...TACTTGTTGAAATGTAAGGCAGTCCCCCTCCTCCTCTTTATCTACATTACTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp GGAAGTAATGTAGATAAAGAGGAGGAGGGGGACTGCCTTACATTTCAACAAGTATGCATACACGAGGTGTaGCTAGGCGCGGCCAATGGC +
Preference number: 5 (lower is better)
Translates to: GSNVDKEEEGDCLTFQQVCIHEV*LGAANG
Trigger: GCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCA...TACTTGTTGAAATGTAAGGCAGTCCCCCTCCTCCTCTTTATCTACATTACTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS CCA 90 bp AGAATACTCCTTCAGTGCAGCCTGCCGCTTCGCATAAGGAAAGTTTaGCTCTTTCTGTCAGGGCCTAACGAGTGTCCAGATTACACATTC +
Preference number: 5 (lower is better)
Translates to: RILLQCSLPLRIRKV*LFLSGPNECPDYTF
Trigger: GAATGTGTAATCTGGACACTCGTTAGGCCCTGACAGAAAGAGCCAAACTTTCCTTATGCGAAGCGGCAGGCTGCACTGAAGGAGTATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS-3UTR CAA 90 bp AACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTGGAACGGACCTGACTATGTAGGAGAGGACTTCTTCTaGGCTGGGCGGCTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: NQQQLKSLSGPWNGPDYVGEDFF*AGRLLV
Trigger: AACCAAGAGCCGCCCAGCCAAGAAGAAGTCCTCTCC...TACATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp AACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTGGAACGGACCTGACTATGTAAAGCAGTCGGCAGAGTaGAAGGCAAGCCCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: NQQQLKSLSGPWNGPDYVKQSAE*KASPEP
Trigger: TGGCTCTGGGCTTGCCTTCAACTCTGCCGACTGCTT...TACATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp AAATTAAAGTGTTGGGCTCAAACAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTGGTGAAAATTCAGTTTaGGAGAAGACGAGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: KLKCWAQTADQSAEPPKAGENSV*EKTRQR
Trigger: CCTTTGCCTCGTCTTCTCCAAAACTGAATTTTCACC...AGCCTTCGGAGGCTCTGCGCTCTGATCCGCTGTTTGAGCCCAACACTTTAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp GTGCTAAGACAAGATATGTTCAGTTCAACCAACCAACAGCAACTAAAAAGTTTACGCCGAGGCGGAAGCTaGAACCAGTCCAGCGCAGGG +
Preference number: 5 (lower is better)
Translates to: VLRQDMFSSTNQQQLKSLRRGGS*NQSSAG
Trigger: CCCTGCGCTGGACTGGTTCAAGCTTCCGCCTCGGCG...TAAACTTTTTAGTTGCTGTTGGTTGGTTGAACTGAACATATCTTGTCTTAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp GCTGTCCAGAAAGACTGGAAGGGGAGGCTTAAGAGTTTAGTAGGGGCTGAAGGGAAAGAAAAAGCGCCATaGATTGAGGAAGAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: AVQKDWKGRLKSLVGAEGKEKAP*IEEEQK
Trigger: CTTCTGCTCTTCCTCAATCAATGGCGCTTTTTCTTT...CCCTTCAGCCCCTACTAAACTCTTAAGCCTCCCCTTCCAGTCTTTCTGGACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp GGAAGTAATGTAGATAAAGAGGAGGAGGGGGACTGCCTTACATTTCAACAAGTATCGGGGGAGTTGAAGTaGAGTTTCCAGGCGGAGGAA +
Preference number: 5 (lower is better)
Translates to: GSNVDKEEEGDCLTFQQVSGELK*SFQAEE
Trigger: TTCCTCCGCCTGGAAACTCAACTTCAACTCCCCCGA...TACTTGTTGAAATGTAAGGCAGTCCCCCTCCTCCTCTTTATCTACATTACTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp GGAAGTAATGTAGATAAAGAGGAGGAGGGGGACTGCCTTACATTTCAACAAGTAAGACAGTCGGGGGAGTaGAAGTTGAGTTTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: GSNVDKEEEGDCLTFQQVRQSGE*KLSFQA
Trigger: CGCCTGGAAACTCAACTTCAACTCCCCCGACTGTCT...TACTTGTTGAAATGTAAGGCAGTCCCCCTCCTCCTCTTTATCTACATTACTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp AAATTAAAGTGTTGGGCTCAAACAGCGGATCAGAGCGCAGAGCCTCCGAAGGCTAAAGAAAAAGCGCCATaGATTGAGGAAGAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: KLKCWAQTADQSAEPPKAKEKAP*IEEEQK
Trigger: CTTCTGCTCTTCCTCAATCAATGGCGCTTTTTCTTT...AGCCTTCGGAGGCTCTGCGCTCTGATCCGCTGTTTGAGCCCAACACTTTAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp GAACGAAGGTGCACTAAAAACTCACTAGACAAAACAAGGGTGTTGAAAGAGAGATCGGGGGAGTTGAAGTaGAGTTTCCAGGCGGAGGAA +
Preference number: 5 (lower is better)
Translates to: ERRCTKNSLDKTRVLKERSGELK*SFQAEE
Trigger: TTCCTCCGCCTGGAAACTCAACTTCAACTCCCCCGA...TCTCTCTTTCAACACCCTTGTTTTGTCTAGTGAGTTTTTAGTGCACCTTCGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp AACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTGGAACGGACCTGACTATGTAGAGTTGGAACTGGGTTaGGGGCCTGGGTTTGTTTGT +
Preference number: 5 (lower is better)
Translates to: NQQQLKSLSGPWNGPDYVELELG*GPGFVC
Trigger: ACAAACAAACCCAGGCCCCAAACCCAGTTCCAACTC...TACATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS CCA 90 bp TTTACCTTGTCGGAGTGGCTTGTCTTGCTCGGTTGTTTAGGTGATTaGAAATGTAGCCTGATGAAGATTGATCACCTTTCTACTGCCCTC +
Preference number: 5 (lower is better)
Translates to: FTLSEWLVLLGCLGD*KCSLMKIDHLSTAL
Trigger: GAGGGCAGTAGAAAGGTGATCAATCTTCATCAGGCTACATTTCCAATCACCTAAACAACCGAGCAAGACAAGCCACTCCGACAAGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS-3UTR CAA 90 bp AACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTGGAACGGACCTGACTATGTACATGCCGTATGGGGGTaGTTTGAGGTAAGACATCAT +
Preference number: 5 (lower is better)
Translates to: NQQQLKSLSGPWNGPDYVHAVWG*FEVRHH
Trigger: ATGATGTCTTACCTCAAACAACCCCCATACGGCATG...TACATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp AACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTGGAACGGACCTGACTATGTAGGTGAAAATTCAGTTTaGGAGAAGACGAGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: NQQQLKSLSGPWNGPDYVGENSV*EKTRQR
Trigger: CCTTTGCCTCGTCTTCTCCAAAACTGAATTTTCACC...TACATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp AACCAACAGCAACTAAAAAGTTTAAGTGGTCCCTGGAACGGACCTGACTATGTAGAACTCTTAGTGGTTTaGATTTGGAGTAGTGTGCGG +
Preference number: 5 (lower is better)
Translates to: NQQQLKSLSGPWNGPDYVELLVV*IWSSVR
Trigger: CCGCACACTACTCCAAATCAAAACCACTAAGAGTTC...TACATAGTCAGGTCCGTTCCAGGGACCACTTAAACTTTTTAGTTGCTGTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS-3UTR CAA 90 bp GAACGAAGGTGCACTAAAAACTCACTAGACAAAACAAGGGTGTTGAAAGAGAGAGAACTCTTAGTGGTTTaGATTTGGAGTAGTGTGCGG +
Preference number: 5 (lower is better)
Translates to: ERRCTKNSLDKTRVLKERELLVV*IWSSVR
Trigger: CCGCACACTACTCCAAATCAAAACCACTAAGAGTTC...TCTCTCTTTCAACACCCTTGTTTTGTCTAGTGAGTTTTTAGTGCACCTTCGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282549.7
ENST00000366671.7
CDS CCA 72 bp GACACGCGGGGGCGCCGCGGGTCATTGGTGGCCACGTaGACCCGCGATAGAGGACTCGGGCAGGCCCCTGGC +
Preference number: 6 (lower is better)
Translates to: DTRGRRGSLVAT*TRDRGLGQAPG
Trigger: GCCAGGGGCCTGCCCGAGTCCTCTATCGCGGGTCCACGTGGCCACCAATGACCCGCGGCGCCCCCGCGTGTC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS CCA 72 bp GCTGCGGGGACACGCGGGGGCGCCGCGGGTCATTGGTaGCCACGTGGACCCGCGATAGAGGACTCGGGCAGG +
Preference number: 6 (lower is better)
Translates to: AAGTRGGAAGHW*PRGPAIEDSGR
Trigger: CCTGCCCGAGTCCTCTATCGCGGGTCCACGTGGCCACCAATGACCCGCGGCGCCCCCGCGTGTCCCCGCAGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS CCA 72 bp CTAGGCCTCAGCGGCGTAGCCCACGCAGACCCGAGCTaGGAGGTCGAAGCCTCGCCCCCGCCGCTGCCGGGA +
Preference number: 6 (lower is better)
Translates to: LGLSGVAHADPS*EVEASPPPLPG
Trigger: TCCCGGCAGCGGCGGGGGCGAGGCTTCGACCTCCCAGCTCGGGTCTGCGTGGGCTACGCCGCTGAGGCCTAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476383.1
CDS CAA 72 bp AGTGGCTGCGGGGACACGCGGGGGCGCCGCGGGTCATaGGTGGCCACGTGGACCCGCGATAGAGGACTCGGG +
Preference number: 6 (lower is better)
Translates to: SGCGDTRGRRGS*VATWTRDRGLG
Trigger: CCCGAGTCCTCTATCGCGGGTCCACGTGGCCACCAATGACCCGCGGCGCCCCCGCGTGTCCCCGCAGCCACT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405984.8
CDS CAA 72 bp GGTCGGGAGCGCCTCAGCTGCGGCCAGCGTCCTTCGTaGCCAGCGCGCACCCGGCCTTCTCTCTGCCCAGTC +
Preference number: 6 (lower is better)
Translates to: GRERLSCGQRPS*PARTRPSLCPV
Trigger: GACTGGGCAGAGAGAAGGCCGGGTGCGCGCTGGCAACGAAGGACGCTGGCCGCAGCTGAGGCGCTCCCGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476383.1
CDS GCA 72 bp GTCGGGAGCGCCTCAGCTGCGGCCAGCGTCCTTCGTTaGCAGCGCGCACCCGGCCTTCTCTCTGCCCAGTCT +
Preference number: 6 (lower is better)
Translates to: VGSASAAASVLR*QRAPGLLSAQS
Trigger: AGACTGGGCAGAGAGAAGGCCGGGTGCGCGCTGGCAACGAAGGACGCTGGCCGCAGCTGAGGCGCTCCCGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476383.1
CDS TCA 72 bp GGGGCCATCGCTACACCCCGCTTAGCGGGATCGCTGTaGAGCAAGCCAGGGACTCGGGCTGCCCTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: GAIATPRLAGSL*SKPGTRAALSC
Trigger: GCAGCTGAGGGCAGCCCGAGTCCCTGGCTTGCTTCACAGCGATCCCGCTAAGCGGGGTGTAGCGATGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476383.1
CDS GCA 72 bp GAATTCGAGGGGCAGAGTTGGGAGGTGGCTCGGCGTTaGCGCGGCACTCCCGGTGCAACGTGGAGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: EFEGQSWEVARR*RGTPGATWRQW
Trigger: CCACTGCCTCCACGTTGCACCGGGAGTGCCGCGGCAACGCCGAGCCACCTCCCAACTCTGCCCCTCGAATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CCA 72 bp GTGGCTCGGCGTTGCCGCGGCACTCCCGGTGCAACGTaGAGGCAGTGGGGACTGGGAAGTCCTGCAGAGTCA +
Preference number: 6 (lower is better)
Translates to: VARRCRGTPGAT*RQWGLGSPAES
Trigger: TGACTCTGCAGGACTTCCCAGTCCCCACTGCCTCCACGTTGCACCGGGAGTGCCGCGGCAACGCCGAGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CAA 72 bp GGAATTCGAGGGGCAGAGTTGGGAGGTGGCTCGGCGTaGCCGCGGCACTCCCGGTGCAACGTGGAGGCAGTG +
Preference number: 6 (lower is better)
Translates to: GIRGAELGGGSA*PRHSRCNVEAV
Trigger: CACTGCCTCCACGTTGCACCGGGAGTGCCGCGGCAACGCCGAGCCACCTCCCAACTCTGCCCCTCGAATTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CCA 72 bp CCTGCCCTCAGCTGCCGGGGCCGTTCACCATCTACCTaGATCTCTCACAGAGACCCGCCGGGCAGCCAACCT +
Preference number: 6 (lower is better)
Translates to: PALSCRGRSPST*ISHRDPPGSQP
Trigger: AGGTTGGCTGCCCGGCGGGTCTCTGTGAGAGATCCAGGTAGATGGTGAACGGCCCCGGCAGCTGAGGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282549.7
ENST00000366671.7
ENST00000405984.8
ENST00000477348.1
ENST00000484066.2
CDS CCA 72 bp GCTGCCCTCAGCTGCCGGGGCCGTTCACCATCTACCTaGATCTCTCACAGAGACCCGCCGGGCAGCCAACCT +
Preference number: 6 (lower is better)
Translates to: AALSCRGRSPST*ISHRDPPGSQP
Trigger: AGGTTGGCTGCCCGGCGGGTCTCTGTGAGAGATCCAGGTAGATGGTGAACGGCCCCGGCAGCTGAGGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476383.1
CDS CCA 72 bp GGCCGGGAAGGCGCATATTGCGCGTTTTCTCAGCCCTaGCCACCTCACACGCCCACGACTCTGCCCCATGCG +
Preference number: 6 (lower is better)
Translates to: GREGAYCAFSQP*PPHTPTTLPHA
Trigger: CGCATGGGGCAGAGTCGTGGGCGTGTGAGGTGGCCAGGGCTGAGAAAACGCGCAATATGCGCCTTCCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CAA 72 bp CTCTGCGCTGGCGGTGGGACCACAACCGGAGAAAGGTaGCCGGTGATCCGGCCGGGAAGGCGCATATTGCGC +
Preference number: 6 (lower is better)
Translates to: LCAGGGTTTGER*PVIRPGRRILR
Trigger: GCGCAATATGCGCCTTCCCGGCCGGATCACCGGCAACCTTTCTCCGGTTGTGGTCCCACCGCCAGCGCAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS TCA 72 bp GGAGGGCAGCAAGTCGCGTGCTGCCATCCTTGTAGCTaGACCCGCGGCCCCAGGACACGGTCGAGAACAGAG +
Preference number: 6 (lower is better)
Translates to: GGQQVACCHPCS*TRGPRTRSRTE
Trigger: CTCTGTTCTCGACCGTGTCCTGGGGCCGCGGGTTCAGCTACAAGGATGGCAGCACGCGACTTGCTGCCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476383.1
CDS GCA 72 bp GGTGGCCCCGCGGCTTTCTCCTTACCTGCCCTCAGCTaGCGGGGCCGTTCACCATCTACCTGGATCTCTCAC +
Preference number: 6 (lower is better)
Translates to: GGPAAFSLPALS*RGRSPSTWISH
Trigger: GTGAGAGATCCAGGTAGATGGTGAACGGCCCCGGCAGCTGAGGGCAGGTAAGGAGAAAGCCGCGGGGCCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477348.1
CDS GCA 72 bp GCCCTGGCCACCTCACACGCCCACGACTCTGCCCCATaGGCCGGCAGTGGGCCCTGTATTGTAAACAGACAG +
Preference number: 6 (lower is better)
Translates to: ALATSHAHDSAP*AGSGPCIVNRQ
Trigger: CTGTCTGTTTACAATACAGGGCCCACTGCCGGCGCATGGGGCAGAGTCGTGGGCGTGTGAGGTGGCCAGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CCA 72 bp CCCGCCGGGCAGCCAACCTGCAAAACAGAGCAGCACTaGAATTACCCTGGCGGCTGGTCTAGGACCCCCAGG +
Preference number: 6 (lower is better)
Translates to: PAGQPTCKTEQH*NYPGGWSRTPR
Trigger: CCTGGGGGTCCTAGACCAGCCGCCAGGGTAATTCCAGTGCTGCTCTGTTTTGCAGGTTGGCTGCCCGGCGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CCA 72 bp TGCGCCGGCAGTGGGCCCTGTATTGTAAACAGACAGTaGGCCCTGTGTTGCAGCCGGCTCCCTGGGCCTGCT +
Preference number: 6 (lower is better)
Translates to: CAGSGPCIVNRQ*ALCCSRLPGPA
Trigger: AGCAGGCCCAGGGAGCCGGCTGCAACACAGGGCCCACTGTCTGTTTACAATACAGGGCCCACTGCCGGCGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CCA 72 bp CTCACACGCCCACGACTCTGCCCCATGCGCCGGCAGTaGGCCCTGTATTGTAAACAGACAGTGGGCCCTGTG +
Preference number: 6 (lower is better)
Translates to: LTRPRLCPMRRQ*ALYCKQTVGPV
Trigger: CACAGGGCCCACTGTCTGTTTACAATACAGGGCCCACTGCCGGCGCATGGGGCAGAGTCGTGGGCGTGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CAA 72 bp GAAAGGTTGCCGGTGATCCGGCCGGGAAGGCGCATATaGCGCGTTTTCTCAGCCCTGGCCACCTCACACGCC +
Preference number: 6 (lower is better)
Translates to: ERLPVIRPGRRI*RVFSALATSHA
Trigger: GGCGTGTGAGGTGGCCAGGGCTGAGAAAACGCGCAATATGCGCCTTCCCGGCCGGATCACCGGCAACCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CAA 90 bp CGCCGGCAGTGGGCCCTGTATTGTAAACAGACAGTGGGCCCTGTGTaGCAGCCGGCTCCCTGGGCCTGCTCAGCAACAAAGCTTGCACTC +
Preference number: 6 (lower is better)
Translates to: RRQWALYCKQTVGPV*QPAPWACSATKLAL
Trigger: GAGTGCAAGCTTTGTTGCTGAGCAGGCCCAGGGAGCCGGCTGCAACACAGGGCCCACTGTCTGTTTACAATACAGGGCCCACTGCCGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CAA 90 bp ACAACCGGAGAAAGGTTGCCGGTGATCCGGCCGGGAAGGCGCATATaGCGCGTTTTCTCAGCCCTGGCCACCTCACACGCCCACGACTCT +
Preference number: 6 (lower is better)
Translates to: TTGERLPVIRPGRRI*RVFSALATSHAHDS
Trigger: AGAGTCGTGGGCGTGTGAGGTGGCCAGGGCTGAGAAAACGCGCAATATGCGCCTTCCCGGCCGGATCACCGGCAACCTTTCTCCGGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS TCA 72 bp GACTGGCCTAGCACCTCAAAGGGTCTCGGGGATTTGTaGAGCCGGAGGGCAGCAAGTCGCGTGCTGCCATCC +
Preference number: 6 (lower is better)
Translates to: DWPSTSKGLGDL*SRRAASRVLPS
Trigger: GGATGGCAGCACGCGACTTGCTGCCCTCCGGCTTCACAAATCCCCGAGACCCTTTGAGGTGCTAGGCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476383.1
CDS TCA 72 bp CTGGCGGTGGGACCACAACCGGAGAAAGGTTGCCGGTaGTCCGGCCGGGAAGGCGCATATTGCGCGTTTTCT +
Preference number: 6 (lower is better)
Translates to: LAVGPQPEKGCR*SGREGAYCAFS
Trigger: AGAAAACGCGCAATATGCGCCTTCCCGGCCGGATCACCGGCAACCTTTCTCCGGTTGTGGTCCCACCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS GCA 72 bp ACTTTGTTTGCTAAGCCCCACACGTTCTCAGGACATTaGCTCGCCTGGGATCGCGCCGAGGGGCCGCAAGGG +
Preference number: 6 (lower is better)
Translates to: TLFAKPHTFSGH*LAWDRAEGPQG
Trigger: CCCTTGCGGCCCCTCGGCGCGATCCCAGGCGAGGCAATGTCCTGAGAACGTGTGGGGCTTAGCAAACAAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS GCA 72 bp TTTCTCAGCCCTGGCCACCTCACACGCCCACGACTCTaGCCCATGCGCCGGCAGTGGGCCCTGTATTGTAAA +
Preference number: 6 (lower is better)
Translates to: FLSPGHLTRPRL*PMRRQWALYCK
Trigger: TTTACAATACAGGGCCCACTGCCGGCGCATGGGGCAGAGTCGTGGGCGTGTGAGGTGGCCAGGGCTGAGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CCA 72 bp CGTTGCCGCGGCACTCCCGGTGCAACGTGGAGGCAGTaGGGACTGGGAAGTCCTGCAGAGTCACTTTGCAAA +
Preference number: 6 (lower is better)
Translates to: RCRGTPGATWRQ*GLGSPAESLCK
Trigger: TTTGCAAAGTGACTCTGCAGGACTTCCCAGTCCCCACTGCCTCCACGTTGCACCGGGAGTGCCGCGGCAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS TCA 72 bp AGATTGATCACCTTTCTACTGCCCTCCCCGGGTATGTaGACGCGAGGCGAGTGCGTAACGGGGCTAGGCCGC +
Preference number: 6 (lower is better)
Translates to: RLITFLLPSPGM*TRGECVTGLGR
Trigger: GCGGCCTAGCCCCGTTACGCACTCGCCTCGCGTTCACATACCCGGGGAGGGCAGTAGAAAGGTGATCAATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS GCA 72 bp CTGGATCTCTCACAGAGACCCGCCGGGCAGCCAACCTaGAAAACAGAGCAGCACTGGAATTACCCTGGCGGC +
Preference number: 6 (lower is better)
Translates to: LDLSQRPAGQPT*KTEQHWNYPGG
Trigger: GCCGCCAGGGTAATTCCAGTGCTGCTCTGTTTTGCAGGTTGGCTGCCCGGCGGGTCTCTGTGAGAGATCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS GCA 72 bp GGGCCCTGTATTGTAAACAGACAGTGGGCCCTGTGTTaGAGCCGGCTCCCTGGGCCTGCTCAGCAACAAAGC +
Preference number: 6 (lower is better)
Translates to: GPCIVNRQWALC*SRLPGPAQQQS
Trigger: GCTTTGTTGCTGAGCAGGCCCAGGGAGCCGGCTGCAACACAGGGCCCACTGTCTGTTTACAATACAGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS GCA 72 bp CGCCCCTGGGTAGCGAATCCGCAAGTAAATGAGCTCTaGGCTGGCGGTGGGACCACAACCGGAGAAAGGTTG +
Preference number: 6 (lower is better)
Translates to: RPWVANPQVNEL*AGGGTTTGERL
Trigger: CAACCTTTCTCCGGTTGTGGTCCCACCGCCAGCGCAGAGCTCATTTACTTGCGGATTCGCTACCCAGGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CAA 90 bp GTAAATGAGCTCTGCGCTGGCGGTGGGACCACAACCGGAGAAAGGTaGCCGGTGATCCGGCCGGGAAGGCGCATATTGCGCGTTTTCTCA +
Preference number: 6 (lower is better)
Translates to: VNELCAGGGTTTGER*PVIRPGRRILRVFS
Trigger: TGAGAAAACGCGCAATATGCGCCTTCCCGGCCGGATCACCGGCAACCTTTCTCCGGTTGTGGTCCCACCGCCAGCGCAGAGCTCATTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CAA 90 bp TGCTCGTCGGCATCTCCCGGGGTTCCAGGTCCCCACCAAGGGTGTTaGCAAGTCTTAAGCGCTTCTACTGAAACGTTGGAGCCCAGCGTC +
Preference number: 6 (lower is better)
Translates to: CSSASPGVPGPHQGC*QVLSASTETLEPSV
Trigger: GACGCTGGGCTCCAACGTTTCAGTAGAAGCGCTTAAGACTTGCAAACACCCTTGGTGGGGACCTGGAACCCCGGGAGATGCCGACGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366671.7
CDS CAA 90 bp GCCCTGTGTTGCAGCCGGCTCCCTGGGCCTGCTCAGCAACAAAGCTaGCACTCAAATCCAACAGTCTGGGGGTCCCCAACATTTGAGAGG +
Preference number: 6 (lower is better)
Translates to: ALCCSRLPGPAQQQS*HSNPTVWGSPTFER
Trigger: CCTCTCAAATGTTGGGGACCCCCAGACTGTTGGATTTGAGTGCAAGCTTTGTTGCTGAGCAGGCCCAGGGAGCCGGCTGCAACACAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS GCA 72 bp ACAGTGGGCCCTGTGTTGCAGCCGGCTCCCTGGGCCTaGTCAGCAACAAAGCTTGCACTCAAATCCAACAGT +
Preference number: 6 (lower is better)
Translates to: TVGPVLQPAPWA*SATKLALKSNS
Trigger: ACTGTTGGATTTGAGTGCAAGCTTTGTTGCTGAGCAGGCCCAGGGAGCCGGCTGCAACACAGGGCCCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CCA 72 bp AAGGGAAGCAGCCAGGGCTCTAGGGCCGAAGGAAAATaGGACTCAAAGCTGCGACGGCTTTGCGAAGCTGCA +
Preference number: 6 (lower is better)
Translates to: KGSSQGSRAEGK*DSKLRRLCEAA
Trigger: TGCAGCTTCGCAAAGCCGTCGCAGCTTTGAGTCCCATTTTCCTTCGGCCCTAGAGCCCTGGCTGCTTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477348.1
CDS CAA 72 bp CCCGCCGGGCAGCCAACCTTGTCGGAGTGGCTTGTCTaGCTCGGTTGTTTAGGTGATTGGAAATGTAGCCTG +
Preference number: 6 (lower is better)
Translates to: PAGQPTLSEWLV*LGCLGDWKCSL
Trigger: CAGGCTACATTTCCAATCACCTAAACAACCGAGCAAGACAAGCCACTCCGACAAGGTTGGCTGCCCGGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282549.7
ENST00000405984.8
ENST00000477348.1
CDS GCA 72 bp AGGGCTCTAGGGCCGAAGGAAAATGGGACTCAAAGCTaGGACGGCTTTGCGAAGCTGCAGCGTGAGTTTTCA +
Preference number: 6 (lower is better)
Translates to: RALGPKENGTQS*DGFAKLQREFS
Trigger: TGAAAACTCACGCTGCAGCTTCGCAAAGCCGTCGCAGCTTTGAGTCCCATTTTCCTTCGGCCCTAGAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477348.1
CDS CAA 72 bp GCATCTCCCGGGGTTCCAGGTCCCCACCAAGGGTGTTaGCAAGTCTTAAGCGCTTCTACTGAAACGTTGGAG +
Preference number: 6 (lower is better)
Translates to: ASPGVPGPHQGC*QVLSASTETLE
Trigger: CTCCAACGTTTCAGTAGAAGCGCTTAAGACTTGCAAACACCCTTGGTGGGGACCTGGAACCCCGGGAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366671.7
CDS CCA 72 bp GCTCAGCAACAAAGCTTGCACTCAAATCCAACAGTCTaGGGGTCCCCAACATTTGAGAGGCTGAGGCAGGGT +
Preference number: 6 (lower is better)
Translates to: AQQQSLHSNPTV*GSPTFERLRQG
Trigger: ACCCTGCCTCAGCCTCTCAAATGTTGGGGACCCCCAGACTGTTGGATTTGAGTGCAAGCTTTGTTGCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CAA 90 bp TGTGCGTGTCCTTCTGGGTTTCACTTTATTGCACAGACACTTTGTTaGCTAAGCCCCACACGTTCTCAGGACATTGCCTCGCCTGGGATC +
Preference number: 6 (lower is better)
Translates to: CACPSGFHFIAQTLC*LSPTRSQDIASPGI
Trigger: GATCCCAGGCGAGGCAATGTCCTGAGAACGTGTGGGGCTTAGCAAACAAAGTGTCTGTGCAATAAAGTGAAACCCAGAAGGACACGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CAA 90 bp GCTTTGTGCGTGTCCTTCTGGGTTTCACTTTATTGCACAGACACTTaGTTTGCTAAGCCCCACACGTTCTCAGGACATTGCCTCGCCTGG +
Preference number: 6 (lower is better)
Translates to: ALCVSFWVSLYCTDT*FAKPHTFSGHCLAW
Trigger: CCAGGCGAGGCAATGTCCTGAGAACGTGTGGGGCTTAGCAAACAAAGTGTCTGTGCAATAAAGTGAAACCCAGAAGGACACGCACAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484066.2
CDS CAA 72 bp GGCCGAAGGAAAATGGGACTCAAAGCTGCGACGGCTTaGCGAAGCTGCAGCGTGAGTTTTCAAAGACTTTCT +
Preference number: 6 (lower is better)
Translates to: GRRKMGLKAATA*RSCSVSFQRLS
Trigger: AGAAAGTCTTTGAAAACTCACGCTGCAGCTTCGCAAAGCCGTCGCAGCTTTGAGTCCCATTTTCCTTCGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477348.1
CDS GCA 72 bp AAAATGGGACTCAAAGCTGCGACGGCTTTGCGAAGCTaGAGCGTGAGTTTTCAAAGACTTTCTCCAAACTTA +
Preference number: 6 (lower is better)
Translates to: KMGLKAATALRS*SVSFQRLSPNL
Trigger: TAAGTTTGGAGAAAGTCTTTGAAAACTCACGCTGCAGCTTCGCAAAGCCGTCGCAGCTTTGAGTCCCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477348.1
CDS CCA 72 bp TCGGAGTGGCTTGTCTTGCTCGGTTGTTTAGGTGATTaGAAATGTAGCCTGATGAAGATTGATCACCTTTCT +
Preference number: 6 (lower is better)
Translates to: SEWLVLLGCLGD*KCSLMKIDHLS
Trigger: AGAAAGGTGATCAATCTTCATCAGGCTACATTTCCAATCACCTAAACAACCGAGCAAGACAAGCCACTCCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484066.2