RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OTULINL (Homo sapiens)

Ensembl gene IDs: ENSG00000145569

Ensembl transcript IDs: ENST00000274217.4, ENST00000513825.1

Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTAGTCCAGCAGAAAAGCCGGCACCCAAAGGAAGTCCAGGTACATaGTGGGAGGCGGACGAAGCCATGACCTGGCATGGACTTGAAGCA +
Preference number: 1 (lower is better)
Translates to: LSPAEKPAPKGSPGT*WEADEAMTWHGLEA
Trigger: TGCTTCAAGTCCATGCCAGGTCATGGCTTCGTCCGCCTCCCAGCATGTACCTGGACTTCCTTTGGGTGCCGGCTTTTCTGCTGGACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CCA 90 bp AGTCCAGCAGAAAAGCCGGCACCCAAAGGAAGTCCAGGTACATGCTaGGAGGCGGACGAAGCCATGACCTGGCATGGACTTGAAGCAGTT +
Preference number: 1 (lower is better)
Translates to: SPAEKPAPKGSPGTC*EADEAMTWHGLEAV
Trigger: AACTGCTTCAAGTCCATGCCAGGTCATGGCTTCGTCCGCCTCCCAGCATGTACCTGGACTTCCTTTGGGTGCCGGCTTTTCTGCTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR TCA 90 bp AGGTACATGCTGGGAGGCGGACGAAGCCATGACCTGGCATGGACTTaGAGCAGTTCCCAAGTTGTTTCCCAGAGTCTGTCTTTGGGGATG +
Preference number: 1 (lower is better)
Translates to: RYMLGGGRSHDLAWT*SSSQVVSQSLSLGM
Trigger: CATCCCCAAAGACAGACTCTGGGAAACAACTTGGGAACTGCTTCAAGTCCATGCCAGGTCATGGCTTCGTCCGCCTCCCAGCATGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR TCA 90 bp CTCCTCCATGCTGGCTCTTGGGCCACACTGTTCCCACATGGAGCTTaGGTCTCCTCCAACACATTCCATGAGCTTCAAGTGCAGAGACAT +
Preference number: 1 (lower is better)
Translates to: LLHAGSWATLFPHGA*VSSNTFHELQVQRH
Trigger: ATGTCTCTGCACTTGAAGCTCATGGAATGTGTTGGAGGAGACTCAAGCTCCATGTGGGAACAGTGTGGCCCAAGAGCCAGCATGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CCA 90 bp GTGCTCTTAAAGGCCCGCCATCATGTGAAGTGGCCACGCCCCTTATaGACAAAGTCAAGCCACCAACTCCCAAATGTATCAGTGCAGCTG +
Preference number: 1 (lower is better)
Translates to: VLLKARHHVKWPRPL*TKSSHQLPNVSVQL
Trigger: CAGCTGCACTGATACATTTGGGAGTTGGTGGCTTGACTTTGTCCATAAGGGGCGTGGCCACTTCACATGATGGCGGGCCTTTAAGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR GCA 90 bp TCCTCTCCTTCGTCATCAGTCTGTACCAGCTGCTTCTCCTCACCTTaGCCTGGGGTTCTTTCCATGAATCTTAGTCCAGCAGAAAAGCCG +
Preference number: 1 (lower is better)
Translates to: SSPSSSVCTSCFSSP*PGVLSMNLSPAEKP
Trigger: CGGCTTTTCTGCTGGACTAAGATTCATGGAAAGAACCCCAGGGCAAGGTGAGGAGAAGCAGCTGGTACAGACTGATGACGAAGGAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CCA 90 bp CGGTCCCCTAGAGAGGGCCCTGGGGACTTTCACCTGACTCTCCCTTaGGTGGAAATGACTTTGGTTCAAGACCATGAAGACATTCAAGAA +
Preference number: 1 (lower is better)
Translates to: RSPREGPGDFHLTLP*VEMTLVQDHEDIQE
Trigger: TTCTTGAATGTCTTCATGGTCTTGAACCAAAGTCATTTCCACCCAAGGGAGAGTCAGGTGAAAGTCCCCAGGGCCCTCTCTAGGGGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR TCA 90 bp CACACTGTTCCCACATGGAGCTTGAGTCTCCTCCAACACATTCCATaGGCTTCAAGTGCAGAGACATGGTGTACACTTCGGGCTGTTCTA +
Preference number: 1 (lower is better)
Translates to: HTVPTWSLSLLQHIP*ASSAETWCTLRAVL
Trigger: TAGAACAGCCCGAAGTGTACACCATGTCTCTGCACTTGAAGCTCATGGAATGTGTTGGAGGAGACTCAAGCTCCATGTGGGAACAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR GCA 90 bp AAGCAGCTTTTCTGGTCCTCTCCTTCGTCATCAGTCTGTACCAGCTaGTTCTCCTCACCTTGCCCTGGGGTTCTTTCCATGAATCTTAGT +
Preference number: 1 (lower is better)
Translates to: KQLFWSSPSSSVCTS*FSSPCPGVLSMNLS
Trigger: ACTAAGATTCATGGAAAGAACCCCAGGGCAAGGTGAGGAGAAGCAGCTGGTACAGACTGATGACGAAGGAGAGGACCAGAAAAGCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CCA 90 bp TGTTTCCCAGAGTCTGTCTTTGGGGATGGCAGCGATGACAAGAAATaGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTT +
Preference number: 1 (lower is better)
Translates to: CFPESVFGDGSDDKK*ARSVSAICVWPSKF
Trigger: AAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCATTTCTTGTCATCGCTGCCATCCCCAAAGACAGACTCTGGGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CCA 90 bp GAATCACATTACACTGAAACTTCCACCACACCCAAGCAGCTTTTCTaGTCCTCTCCTTCGTCATCAGTCTGTACCAGCTGCTTCTCCTCA +
Preference number: 1 (lower is better)
Translates to: ESHYTETSTTPKQLF*SSPSSSVCTSCFSS
Trigger: TGAGGAGAAGCAGCTGGTACAGACTGATGACGAAGGAGAGGACCAGAAAAGCTGCTTGGGTGTGGTGGAAGTTTCAGTGTAATGTGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR GCA 90 bp ACTGGATTGAAATCTTTCTCGCAACTTGGTTCTCTAAAGAATTCTTaGCCCCCGCCCACAACACAACATGATGGGTTGACTGAGGTCACA +
Preference number: 1 (lower is better)
Translates to: TGLKSFSQLGSLKNS*PPPTTQHDGLTEVT
Trigger: TGTGACCTCAGTCAACCCATCATGTTGTGTTGTGGGCGGGGGGCAAGAATTCTTTAGAGAACCAAGTTGCGAGAAAGATTTCAATCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CCA 90 bp ATATTAAACTTCTTTGTGCTCTTAAAGGCCCGCCATCATGTGAAGTaGCCACGCCCCTTATGGACAAAGTCAAGCCACCAACTCCCAAAT +
Preference number: 1 (lower is better)
Translates to: ILNFFVLLKARHHVK*PRPLWTKSSHQLPN
Trigger: ATTTGGGAGTTGGTGGCTTGACTTTGTCCATAAGGGGCGTGGCCACTTCACATGATGGCGGGCCTTTAAGAGCACAAAGAAGTTTAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR TCA 90 bp TATTTAAGGGAGTCACAGATGTGCCTACTAGGAATCACATTACACTaGAACTTCCACCACACCCAAGCAGCTTTTCTGGTCCTCTCCTTC +
Preference number: 1 (lower is better)
Translates to: YLRESQMCLLGITLH*NFHHTQAAFLVLSF
Trigger: GAAGGAGAGGACCAGAAAAGCTGCTTGGGTGTGGTGGAAGTTTCAGTGTAATGTGATTCCTAGTAGGCACATCTGTGACTCCCTTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CCA 90 bp AAATGTCAGGTACACTTCTGGACAGCTCAAGTGGAGCCAAAATTTTaGAGCAACAATTCTATAAGTATCAGCCACAGCAGCCCATGGCAG +
Preference number: 1 (lower is better)
Translates to: KCQVHFWTAQVEPKF*SNNSISISHSSPWQ
Trigger: CTGCCATGGGCTGCTGTGGCTGATACTTATAGAATTGTTGCTCCAAAATTTTGGCTCCACTTGAGCTGTCCAGAAGTGTACCTGACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR TCA 90 bp TCACCTGACTCTCCCTTGGGTGGAAATGACTTTGGTTCAAGACCATaGAGACATTCAAGAAATTCAACTCACCAGGGTGGCTCTGAATTA +
Preference number: 1 (lower is better)
Translates to: SPDSPLGGNDFGSRP*RHSRNSTHQGGSEL
Trigger: TAATTCAGAGCCACCCTGGTGAGTTGAATTTCTTGAATGTCTTCATGGTCTTGAACCAAAGTCATTTCCACCCAAGGGAGAGTCAGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR TCA 90 bp AATGGGGTAAAGTCACAAACCATCCTTAAAGCATTCCAGTGTCACTaGTTGGTGCCTCATGCACCTTTTCAAACTTGTGAACAAGCAAAA +
Preference number: 1 (lower is better)
Translates to: NGVKSQTILKAFQCH*LVPHAPFQTCEQAK
Trigger: TTTTGCTTGTTCACAAGTTTGAAAAGGTGCATGAGGCACCAATCAGTGACACTGGAATGCTTTAAGGATGGTTTGTGACTTTACCCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR TCA 90 bp GTTCATGTAGTACACACGACTGATCATCCCCATTGCAAAAGAATATaGATGCTAATTTCAGACATGACAGCATTTGACACACTCCCTTTT +
Preference number: 1 (lower is better)
Translates to: VHVVHTTDHPHCKRI*MLISDMTAFDTLPF
Trigger: AAAAGGGAGTGTGTCAAATGCTGTCATGTCTGAAATTAGCATTCATATTCTTTTGCAATGGGGATGATCAGTCGTGTGTACTACATGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR TCA 90 bp CTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTGGAGGTCTCCGGTCCCCTAACTCTCTCCTCCTaGCTCCCTCCTAGGTTGTAC +
Preference number: 2 (lower is better)
Translates to: LMEVEPILHQLSLEVSGPLTLSS*LPPRLY
Trigger: GTACAACCTAGGAGGGAGTCAGGAGGAGAGAGTTAG...GGGACCGGAGACCTCCAGACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR GCA 90 bp CTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTGGAGGTCTCCGGTCCCCTCAATTCTACAGGCTaGCTGCAACTCCCTGGCTTA +
Preference number: 2 (lower is better)
Translates to: LMEVEPILHQLSLEVSGPLNSTG*LQLPGL
Trigger: TAAGCCAGGGAGTTGCAGGCAGCCTGTAGAATTGAG...GGGACCGGAGACCTCCAGACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CCA 90 bp CTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTGGAGGTCTCCGGTCCCTGTCAGGTACACTTCTaGACAGCTCAAGTGGAGCCA +
Preference number: 2 (lower is better)
Translates to: LMEVEPILHQLSLEVSGPCQVHF*TAQVEP
Trigger: TGGCTCCACTTGAGCTGTCCAGAAGTGTACCTGACA...GGGACCGGAGACCTCCAGACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CAA 90 bp CATTCTATAGCAGTCTGCTCACACAGCCCTCCTCCATGCTGGCTCTaGGGCCACACTGTTCCCACATGGAGCTTGAGTCTCCTCCAACAC +
Preference number: 2 (lower is better)
Translates to: HSIAVCSHSPPPCWL*GHTVPTWSLSLLQH
Trigger: GTGTTGGAGGAGACTCAAGCTCCATGTGGGAACAGTGTGGCCCAAGAGCCAGCATGGAGGAGGGCTGTGTGAGCAGACTGCTATAGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CCA 90 bp CTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTGGAGGTCTCCGGTCCCCTAAAATCAAGGTGTTaGCAGGGCTGCGTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: LMEVEPILHQLSLEVSGPLKSRC*QGCVPS
Trigger: AGAAGGAACGCAGCCCTGCCAACACCTTGATTTTAG...GGGACCGGAGACCTCCAGACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR TCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAAAGGCCCGCCATCATGTaGAGTGGCCACGCCCCTTAT +
Preference number: 2 (lower is better)
Translates to: WARSVSAICVWPSKFADKRPAIM*SGHAPY
Trigger: ATAAGGGGCGTGGCCACTTCACATGATGGCGGGCCT...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CCA 90 bp ATCCTGGCTGCTCTTCTCTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCCAACTCCCTGGCTTATaGCCCCTTCCTCCATCTTCA +
Preference number: 2 (lower is better)
Translates to: ILAALLSWRLSPSSTSLVQLPGL*PLPPSS
Trigger: TGAAGATGGAGGAAGGGGCCATAAGCCAGGGAGTTG...GACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGCCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR TCA 90 bp CTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTGGAGGTCTCCGGTCCCGACTGTAGAGGTCAATaGAGAACTCTTGTTTCTGTG +
Preference number: 2 (lower is better)
Translates to: LMEVEPILHQLSLEVSGPDCRGQ*RTLVSV
Trigger: CACAGAAACAAGAGTTCTTCATTGACCTCTACAGTC...GGGACCGGAGACCTCCAGACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR TCA 90 bp ATCCTGGCTGCTCTTCTCTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCCACAACATGATGGGTTaGCTGAGGTCACAGAGCTAC +
Preference number: 2 (lower is better)
Translates to: ILAALLSWRLSPSSTSLVHNMMG*LRSQSY
Trigger: GTAGCTCTGTGACCTCAGTCAACCCATCATGTTGTG...GACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGCCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR TCA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGGGCAGGAGAATCGCTTaGACCTGGGAGGTAGAGGTT +
Preference number: 2 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVGRRIA*TWEVEV
Trigger: AACCTCTACCTCCCAGGTTCAAGCGATTCTCCTGCC...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR TCA 90 bp CTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTGGAGGTCTCCGGTCCCGATAATATTCTAAATTaGGCCCAGAAGCCACCCATA +
Preference number: 2 (lower is better)
Translates to: LMEVEPILHQLSLEVSGPDNILN*AQKPPI
Trigger: TATGGGTGGCTTCTGGGCTCAATTTAGAATATTATC...GGGACCGGAGACCTCCAGACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR TCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAATTCTCTCATGGAGGTTaGGCCCATCCTCCACCAGCT +
Preference number: 2 (lower is better)
Translates to: WARSVSAICVWPSKFADKFSHGG*AHPPPA
Trigger: AGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAA...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR GCA 90 bp ATCCTGGCTGCTCTTCTCTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTCTCTAAAGAATTCTTaGCCCCCGCCCACAACACAA +
Preference number: 2 (lower is better)
Translates to: ILAALLSWRLSPSSTSLVSLKNS*PPPTTQ
Trigger: TTGTGTTGTGGGCGGGGGGCAAGAATTCTTTAGAGA...GACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGCCAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAAGGGCTGCGTTCCTTCTaGAGGCTATGGGGAAGTTTC +
Preference number: 2 (lower is better)
Translates to: WARSVSAICVWPSKFADKGLRSF*RLWGSF
Trigger: GAAACTTCCCCATAGCCTCCAGAAGGAACGCAGCCC...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAAGCTGCTCTTCTCTCATaGAGGTTGAGCCCATCCTCC +
Preference number: 2 (lower is better)
Translates to: WARSVSAICVWPSKFADKAALLS*RLSPSS
Trigger: GGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGC...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAACTCCATGCTGGCTCTTaGGCCACACTGTTCCCACAT +
Preference number: 2 (lower is better)
Translates to: WARSVSAICVWPSKFADKLHAGS*ATLFPH
Trigger: ATGTGGGAACAGTGTGGCCCAAGAGCCAGCATGGAG...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR GCA 90 bp CAAGTGGAGCCAAAATTTTGGAGCAACAATTCTATAAGTATCAGCCACAGCAGCGTCACTGGTGAGCACTaGTGTTCGGCCCCCAGCGGA +
Preference number: 2 (lower is better)
Translates to: QVEPKFWSNNSISISHSSVTGEH*CSAPSG
Trigger: TCCGCTGGGGGCCGAACAGCAGTGCTCACCAGTGAC...GCTGCTGTGGCTGATACTTATAGAATTGTTGCTCCAAAATTTTGGCTCCACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR GCA 90 bp ATCCTGGCTGCTCTTCTCTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCAGAGAGAGACTTTATTaGAACTGTGACCACCGTCAC +
Preference number: 2 (lower is better)
Translates to: ILAALLSWRLSPSSTSLVRERLY*NCDHRH
Trigger: GTGACGGTGGTCACAGTTGCAATAAAGTCTCTCTCT...GACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGCCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR TCA 90 bp ACCTGCTTTAAAAAGAGGATCTGTGGTGTGTCCTTCTGTATAGTACAAAGAAGAGACCACCGTCACTGGTaGGCACTGCTGTTCGGCCCC +
Preference number: 2 (lower is better)
Translates to: TCFKKRICGVSFCIVQRRDHRHW*ALLFGP
Trigger: GGGGCCGAACAGCAGTGCTCACCAGTGACGGTGGTC...TCTTCTTTGTACTATACAGAAGGACACACCACAGATCCTCTTTTTAAAGCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR TCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAAAGCCCTTTACGGCTCTaGGGATTCAGACACAGACAT +
Preference number: 2 (lower is better)
Translates to: WARSVSAICVWPSKFADKSPLRL*GFRHRH
Trigger: ATGTCTGTGTCTGAATCCTCAGAGCCGTAAAGGGCT...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR TCA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGGTTGTACTTCTCCACTaGGGCTCTTTTAAGCCCAGA +
Preference number: 2 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVVVLLH*GSFKPR
Trigger: TCTGGGCTTAAAAGAGCCTCAGTGGAGAAGTACAAC...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR TCA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGTCACCAGGGTGGCTCTaGATTAATAGTTTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVSPGWL*INSFLG
Trigger: CCCCAAGAAACTATTAATTCAGAGCCACCCTGGTGA...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR GCA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGATTGTGCCACTGCACTaGAGCCTGAGCAAAAAGAGT +
Preference number: 2 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVIVPLH*SLSKKS
Trigger: ACTCTTTTTGCTCAGGCTGCAGTGCAGTGGCACAAT...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CCA 90 bp CTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTGGAGGTCTCCGGTCCCGTGGAGCCAAAATTTTaGAGCAACAATTCTATAAGT +
Preference number: 2 (lower is better)
Translates to: LMEVEPILHQLSLEVSGPVEPKF*SNNSIS
Trigger: ACTTATAGAATTGTTGCTCCAAAATTTTGGCTCCAC...GGGACCGGAGACCTCCAGACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CAA 90 bp GGCCCTGGGGACTTTCACCTGACTCTCCCTTGGGTGGAAATGACTTaGGTTCAAGACCATGAAGACATTCAAGAAATTCAACTCACCAGG +
Preference number: 2 (lower is better)
Translates to: GPGDFHLTLPWVEMT*VQDHEDIQEIQLTR
Trigger: CCTGGTGAGTTGAATTTCTTGAATGTCTTCATGGTCTTGAACCAAAGTCATTTCCACCCAAGGGAGAGTCAGGTGAAAGTCCCCAGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAAAAAACCATCCATGCATaGCTGCATCCAGTGTACCTG +
Preference number: 2 (lower is better)
Translates to: WARSVSAICVWPSKFADKKTIHA*LHPVYL
Trigger: CAGGTACACTGGATGCAGCCATGCATGGATGGTTTT...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CCA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGTCCTTCTGGAGGCTATaGGGAAGTTTCTGTTTCCTT +
Preference number: 2 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVSFWRL*GSFCFL
Trigger: AAGGAAACAGAAACTTCCCCATAGCCTCCAGAAGGA...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR TCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAAGGCTGCCAATCCTGGTaGAAAAATTTTTCCTTTCAG +
Preference number: 2 (lower is better)
Translates to: WARSVSAICVWPSKFADKGCQSW*KNFSFQ
Trigger: CTGAAAGGAAAAATTTTTTCACCAGGATTGGCAGCC...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR GCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAATCCCAAATGTATCAGTaGAGCTGCTTCAGAGGAAAT +
Preference number: 2 (lower is better)
Translates to: WARSVSAICVWPSKFADKSQMYQ*SCFRGN
Trigger: ATTTCCTCTGAAGCAGCTGCACTGATACATTTGGGA...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CCA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGGAACTCTTGTTTCTGTaGCTGAGCTCATTAATCTTC +
Preference number: 2 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVELLFL*LSSLIF
Trigger: GAAGATTAATGAGCTCAGCCACAGAAACAAGAGTTC...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CCA 90 bp ACCTGCTTTAAAAAGAGGATCTGTGGTGTGTCCTTCTGTATAGTACAAAGAAGAAGTCCAGGTACATGCTaGGAGGCGGACGAAGCCATG +
Preference number: 2 (lower is better)
Translates to: TCFKKRICGVSFCIVQRRSPGTC*EADEAM
Trigger: CATGGCTTCGTCCGCCTCCCAGCATGTACCTGGACT...TCTTCTTTGTACTATACAGAAGGACACACCACAGATCCTCTTTTTAAAGCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CAA 90 bp CAAATGTCAGGTACACTTCTGGACAGCTCAAGTGGAGCCAAAATTTaGGAGCAACAATTCTATAAGTATCAGCCACAGCAGCCCATGGCA +
Preference number: 2 (lower is better)
Translates to: QMSGTLLDSSSGAKI*EQQFYKYQPQQPMA
Trigger: TGCCATGGGCTGCTGTGGCTGATACTTATAGAATTGTTGCTCCAAAATTTTGGCTCCACTTGAGCTGTCCAGAAGTGTACCTGACATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CAA 90 bp AATGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTaGCTGACAAATGATAAGGCACAATGGGGTAAAGTCACAAACCAT +
Preference number: 2 (lower is better)
Translates to: NGPGVSQPFVFGPVS*LTNDKAQWGKVTNH
Trigger: ATGGTTTGTGACTTTACCCCATTGTGCCTTATCATTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR TCA 90 bp ACCTGCTTTAAAAAGAGGATCTGTGGTGTGTCCTTCTGTATAGTACAAAGAAGACTGGGGACTTTCACCTaGCTCTCCCTTGGGTGGAAA +
Preference number: 2 (lower is better)
Translates to: TCFKKRICGVSFCIVQRRLGTFT*LSLGWK
Trigger: TTTCCACCCAAGGGAGAGTCAGGTGAAAGTCCCCAG...TCTTCTTTGTACTATACAGAAGGACACACCACAGATCCTCTTTTTAAAGCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CCA 90 bp ACCTGCTTTAAAAAGAGGATCTGTGGTGTGTCCTTCTGTATAGTACAAAGAAGACGCCATCATGTGAAGTaGCCACGCCCCTTATGGACA +
Preference number: 2 (lower is better)
Translates to: TCFKKRICGVSFCIVQRRRHHVK*PRPLWT
Trigger: TGTCCATAAGGGGCGTGGCCACTTCACATGATGGCG...TCTTCTTTGTACTATACAGAAGGACACACCACAGATCCTCTTTTTAAAGCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAAAAATTTATACTCGTGTaGAAATGGGTTTTACAGCCC +
Preference number: 2 (lower is better)
Translates to: WARSVSAICVWPSKFADKKFILV*KWVLQP
Trigger: GGGCTGTAAAACCCATTTCCACACGAGTATAAATTT...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR GCA 90 bp ACCTGCTTTAAAAAGAGGATCTGTGGTGTGTCCTTCTGTATAGTACAAAGAAGACCATCCATGCATGGCTaGATCCAGTGTACCTGTAAT +
Preference number: 2 (lower is better)
Translates to: TCFKKRICGVSFCIVQRRPSMHG*IQCTCN
Trigger: ATTACAGGTACACTGGATGCAGCCATGCATGGATGG...TCTTCTTTGTACTATACAGAAGGACACACCACAGATCCTCTTTTTAAAGCAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CAA 90 bp GATGTTTCCAAACAGGCAGGGACTGTAGAGGTCAATGAAGAACTCTaGTTTCTGTGGCTGAGCTCATTAATCTTCAACCAGAAAACAAAA +
Preference number: 2 (lower is better)
Translates to: DVSKQAGTVEVNEEL*FLWLSSLIFNQKTK
Trigger: TTTTGTTTTCTGGTTGAAGATTAATGAGCTCAGCCACAGAAACAAGAGTTCTTCATTGACCTCTACAGTCCCTGCCTGTTTGGAAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CAA 90 bp GGTGTGTCCTTCTGTATAGTACAAAGAAGAGCATGTCGTTTCAATTaGCTTGTAAAGACATACAGGAGGAATGGTCTCAACTGCAACTAC +
Preference number: 2 (lower is better)
Translates to: GVSFCIVQRRACRFN*LVKTYRRNGLNCNY
Trigger: GTAGTTGCAGTTGAGACCATTCCTCCTGTATGTCTTTACAAGCAAATTGAAACGACATGCTCTTCTTTGTACTATACAGAAGGACACACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR TCA 90 bp CAAGTGGAGCCAAAATTTTGGAGCAACAATTCTATAAGTATCAGCCACAGCAGCACACTGTCAGTTAAATaGCAGGGGTTATACAAAACC +
Preference number: 2 (lower is better)
Translates to: QVEPKFWSNNSISISHSSTLSVK*QGLYKT
Trigger: GGTTTTGTATAACCCCTGTCATTTAACTGACAGTGT...GCTGCTGTGGCTGATACTTATAGAATTGTTGCTCCAAAATTTTGGCTCCACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CCA 90 bp ACCTGCTTTAAAAAGAGGATCTGTGGTGTGTCCTTCTGTATAGTACAAAGAAGATCTGGACAGCTCAAGTaGAGCCAAAATTTTGGAGCA +
Preference number: 2 (lower is better)
Translates to: TCFKKRICGVSFCIVQRRSGQLK*SQNFGA
Trigger: TGCTCCAAAATTTTGGCTCCACTTGAGCTGTCCAGA...TCTTCTTTGTACTATACAGAAGGACACACCACAGATCCTCTTTTTAAAGCAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR GCA 90 bp ACCTGCTTTAAAAAGAGGATCTGTGGTGTGTCCTTCTGTATAGTACAAAGAAGAAGTGTCACTGATTGGTaGCTCATGCACCTTTTCAAA +
Preference number: 2 (lower is better)
Translates to: TCFKKRICGVSFCIVQRRSVTDW*LMHLFK
Trigger: TTTGAAAAGGTGCATGAGGCACCAATCAGTGACACT...TCTTCTTTGTACTATACAGAAGGACACACCACAGATCCTCTTTTTAAAGCAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR TCA 90 bp ACCTGCTTTAAAAAGAGGATCTGTGGTGTGTCCTTCTGTATAGTACAAAGAAGATCAAGGATATTCTCTTaGCTAAACTTCCCAAGAATC +
Preference number: 2 (lower is better)
Translates to: TCFKKRICGVSFCIVQRRSRIFS*LNFPRI
Trigger: GATTCTTGGGAAGTTTAGTCAAGAGAATATCCTTGA...TCTTCTTTGTACTATACAGAAGGACACACCACAGATCCTCTTTTTAAAGCAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR GCA 90 bp TTAGAAAGACATTTAAATGTTGGCATCACCCAGGAAGCTCACCTCAAATTTATTATTATCTTACAGTTCTaGAGATTAGAGGTCCAACAC +
Preference number: 2 (lower is better)
Translates to: LERHLNVGITQEAHLKFIIILQF*RLEVQH
Trigger: GTGTTGGACCTCTAATCTGCAGAACTGTAAGATAAT...AATAAATTTGAGGTGAGCTTCCTGGGTGATGCCAACATTTAAATGTCTTTCTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR GCA 72 bp GCAGAAAAGCCGGCACCCAAAGGAAGTCCAGGTACATaGTGGGAGGCGGACGAAGCCATGACCTGGCATGGA +
Preference number: 3 (lower is better)
Translates to: AEKPAPKGSPGT*WEADEAMTWHG
Trigger: TCCATGCCAGGTCATGGCTTCGTCCGCCTCCCAGCATGTACCTGGACTTCCTTTGGGTGCCGGCTTTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CCA 72 bp GAAAAGCCGGCACCCAAAGGAAGTCCAGGTACATGCTaGGAGGCGGACGAAGCCATGACCTGGCATGGACTT +
Preference number: 3 (lower is better)
Translates to: EKPAPKGSPGTC*EADEAMTWHGL
Trigger: AAGTCCATGCCAGGTCATGGCTTCGTCCGCCTCCCAGCATGTACCTGGACTTCCTTTGGGTGCCGGCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CCA 72 bp TCTATAGCAGTCTGCTCACACAGCCCTCCTCCATGCTaGCTCTTGGGCCACACTGTTCCCACATGGAGCTTG +
Preference number: 3 (lower is better)
Translates to: SIAVCSHSPPPC*LLGHTVPTWSL
Trigger: CAAGCTCCATGTGGGAACAGTGTGGCCCAAGAGCCAGCATGGAGGAGGGCTGTGTGAGCAGACTGCTATAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CCA 72 bp CCAGGTACATGCTGGGAGGCGGACGAAGCCATGACCTaGCATGGACTTGAAGCAGTTCCCAAGTTGTTTCCC +
Preference number: 3 (lower is better)
Translates to: PGTCWEADEAMT*HGLEAVPKLFP
Trigger: GGGAAACAACTTGGGAACTGCTTCAAGTCCATGCCAGGTCATGGCTTCGTCCGCCTCCCAGCATGTACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR TCA 72 bp CTGGGAGGCGGACGAAGCCATGACCTGGCATGGACTTaGAGCAGTTCCCAAGTTGTTTCCCAGAGTCTGTCT +
Preference number: 3 (lower is better)
Translates to: LGGGRSHDLAWT*SSSQVVSQSLS
Trigger: AGACAGACTCTGGGAAACAACTTGGGAACTGCTTCAAGTCCATGCCAGGTCATGGCTTCGTCCGCCTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR TCA 72 bp GAAGTCCAGGTACATGCTGGGAGGCGGACGAAGCCATaGCCTGGCATGGACTTGAAGCAGTTCCCAAGTTGT +
Preference number: 3 (lower is better)
Translates to: EVQVHAGRRTKP*PGMDLKQFPSC
Trigger: ACAACTTGGGAACTGCTTCAAGTCCATGCCAGGTCATGGCTTCGTCCGCCTCCCAGCATGTACCTGGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR TCA 72 bp GCTGGCTCTTGGGCCACACTGTTCCCACATGGAGCTTaGGTCTCCTCCAACACATTCCATGAGCTTCAAGTG +
Preference number: 3 (lower is better)
Translates to: AGSWATLFPHGA*VSSNTFHELQV
Trigger: CACTTGAAGCTCATGGAATGTGTTGGAGGAGACTCAAGCTCCATGTGGGAACAGTGTGGCCCAAGAGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR TCA 72 bp GCTGCTTCTCCTCACCTTGCCCTGGGGTTCTTTCCATaGATCTTAGTCCAGCAGAAAAGCCGGCACCCAAAG +
Preference number: 3 (lower is better)
Translates to: AASPHLALGFFP*ILVQQKSRHPK
Trigger: CTTTGGGTGCCGGCTTTTCTGCTGGACTAAGATTCATGGAAAGAACCCCAGGGCAAGGTGAGGAGAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CAA 90 bp ATCCTGGCTGCTCTTCTCTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTCACCTGACTCTCCCTaGGGTGGAAATGACTTTGGT +
Preference number: 3 (lower is better)
Translates to: ILAALLSWRLSPSSTSLVSPDSP*GGNDFG
Trigger: ACCAAAGTCATTTCCACCCAAGGGAGAGTCAGGTGA...GACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGCCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CCA 72 bp AAGGCCCGCCATCATGTGAAGTGGCCACGCCCCTTATaGACAAAGTCAAGCCACCAACTCCCAAATGTATCA +
Preference number: 3 (lower is better)
Translates to: KARHHVKWPRPL*TKSSHQLPNVS
Trigger: TGATACATTTGGGAGTTGGTGGCTTGACTTTGTCCATAAGGGGCGTGGCCACTTCACATGATGGCGGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CAA 90 bp ATCCTGGCTGCTCTTCTCTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCACACAACATGATGGGTaGACTGAGGTCACAGAGCTA +
Preference number: 3 (lower is better)
Translates to: ILAALLSWRLSPSSTSLVTQHDG*TEVTEL
Trigger: TAGCTCTGTGACCTCAGTCAACCCATCATGTTGTGT...GACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGCCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CAA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAAGCTAAAATCAAGGTGTaGGCAGGGCTGCGTTCCTTC +
Preference number: 3 (lower is better)
Translates to: WARSVSAICVWPSKFADKAKIKV*AGLRSF
Trigger: GAAGGAACGCAGCCCTGCCAACACCTTGATTTTAGC...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CAA 90 bp ATCCTGGCTGCTCTTCTCTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTGGGTGGAAATGACTTaGGTTCAAGACCATGAAGAC +
Preference number: 3 (lower is better)
Translates to: ILAALLSWRLSPSSTSLVWVEMT*VQDHED
Trigger: GTCTTCATGGTCTTGAACCAAAGTCATTTCCACCCA...GACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGCCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR TCA 72 bp CCCACATGGAGCTTGAGTCTCCTCCAACACATTCCATaGGCTTCAAGTGCAGAGACATGGTGTACACTTCGG +
Preference number: 3 (lower is better)
Translates to: PTWSLSLLQHIP*ASSAETWCTLR
Trigger: CCGAAGTGTACACCATGTCTCTGCACTTGAAGCTCATGGAATGTGTTGGAGGAGACTCAAGCTCCATGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR GCA 72 bp TCGTCATCAGTCTGTACCAGCTGCTTCTCCTCACCTTaGCCTGGGGTTCTTTCCATGAATCTTAGTCCAGCA +
Preference number: 3 (lower is better)
Translates to: SSSVCTSCFSSP*PGVLSMNLSPA
Trigger: TGCTGGACTAAGATTCATGGAAAGAACCCCAGGGCAAGGTGAGGAGAAGCAGCTGGTACAGACTGATGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CCA 72 bp TTCTTTGTGCTCTTAAAGGCCCGCCATCATGTGAAGTaGCCACGCCCCTTATGGACAAAGTCAAGCCACCAA +
Preference number: 3 (lower is better)
Translates to: FFVLLKARHHVK*PRPLWTKSSHQ
Trigger: TTGGTGGCTTGACTTTGTCCATAAGGGGCGTGGCCACTTCACATGATGGCGGGCCTTTAAGAGCACAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CCA 72 bp TACACTGAAACTTCCACCACACCCAAGCAGCTTTTCTaGTCCTCTCCTTCGTCATCAGTCTGTACCAGCTGC +
Preference number: 3 (lower is better)
Translates to: YTETSTTPKQLF*SSPSSSVCTSC
Trigger: GCAGCTGGTACAGACTGATGACGAAGGAGAGGACCAGAAAAGCTGCTTGGGTGTGGTGGAAGTTTCAGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CCA 72 bp AGGCGGATCGCCCAAGGTCAGGAGTTCAGATCAGCCTaGCTAAATGGTGAAACCCCGTTTCTACTAAAAACA +
Preference number: 3 (lower is better)
Translates to: RRIAQGQEFRSA*LNGETPFLLKT
Trigger: TGTTTTTAGTAGAAACGGGGTTTCACCATTTAGCCAGGCTGATCTGAACTCCTGACCTTGGGCGATCCGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CAA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGGTCAATGAAGAACTCTaGTTTCTGTGGCTGAGCTCA +
Preference number: 3 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVVNEEL*FLWLSS
Trigger: TGAGCTCAGCCACAGAAACAAGAGTTCTTCATTGAC...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CAA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAACCATCCAATACCCATTaGCAGAAAAGTCCTGGGAAA +
Preference number: 3 (lower is better)
Translates to: WARSVSAICVWPSKFADKPSNTH*QKSPGK
Trigger: TTTCCCAGGACTTTTCTGCAAATGGGTATTGGATGG...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR TCA 72 bp GAGTCACAGATGTGCCTACTAGGAATCACATTACACTaGAACTTCCACCACACCCAAGCAGCTTTTCTGGTC +
Preference number: 3 (lower is better)
Translates to: ESQMCLLGITLH*NFHHTQAAFLV
Trigger: GACCAGAAAAGCTGCTTGGGTGTGGTGGAAGTTTCAGTGTAATGTGATTCCTAGTAGGCACATCTGTGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR TCA 72 bp TCTCCCTTGGGTGGAAATGACTTTGGTTCAAGACCATaGAGACATTCAAGAAATTCAACTCACCAGGGTGGC +
Preference number: 3 (lower is better)
Translates to: SPLGGNDFGSRP*RHSRNSTHQGG
Trigger: GCCACCCTGGTGAGTTGAATTTCTTGAATGTCTTCATGGTCTTGAACCAAAGTCATTTCCACCCAAGGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR GCA 72 bp AAATCTTTCTCGCAACTTGGTTCTCTAAAGAATTCTTaGCCCCCGCCCACAACACAACATGATGGGTTGACT +
Preference number: 3 (lower is better)
Translates to: KSFSQLGSLKNS*PPPTTQHDGLT
Trigger: AGTCAACCCATCATGTTGTGTTGTGGGCGGGGGGCAAGAATTCTTTAGAGAACCAAGTTGCGAGAAAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR GCA 72 bp AAACCATCCTTAAAGCATTCCAGTGTCACTGATTGGTaGCTCATGCACCTTTTCAAACTTGTGAACAAGCAA +
Preference number: 3 (lower is better)
Translates to: KPSLKHSSVTDW*LMHLFKLVNKQ
Trigger: TTGCTTGTTCACAAGTTTGAAAAGGTGCATGAGGCACCAATCAGTGACACTGGAATGCTTTAAGGATGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CAA 90 bp ACCTGCTTTAAAAAGAGGATCTGTGGTGTGTCCTTCTGTATAGTACAAAGAAGAGATTGGAGCACTTCATaGTTACCCTGTGAAATACAC +
Preference number: 3 (lower is better)
Translates to: TCFKKRICGVSFCIVQRRDWSTS*LPCEIH
Trigger: GTGTATTTCACAGGGTAACAATGAAGTGCTCCAATC...TCTTCTTTGTACTATACAGAAGGACACACCACAGATCCTCTTTTTAAAGCAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR TCA 72 bp GCTACCATCAGACATGGTTCATGTAGTACACACGACTaGTCATCCCCATTGCAAAAGAATATGAATGCTAAT +
Preference number: 3 (lower is better)
Translates to: ATIRHGSCSTHD*SSPLQKNMNAN
Trigger: ATTAGCATTCATATTCTTTTGCAATGGGGATGATCAGTCGTGTGTACTACATGAACCATGTCTGATGGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR TCA 72 bp GTACACACGACTGATCATCCCCATTGCAAAAGAATATaGATGCTAATTTCAGACATGACAGCATTTGACACA +
Preference number: 3 (lower is better)
Translates to: VHTTDHPHCKRI*MLISDMTAFDT
Trigger: TGTGTCAAATGCTGTCATGTCTGAAATTAGCATTCATATTCTTTTGCAATGGGGATGATCAGTCGTGTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CCA 72 bp GGAGAATCTAGAAAAATCTCCCTATTTCAGCATCATTaGATTAGCATCTCAGTTCCACCTGCAACCTTAATT +
Preference number: 3 (lower is better)
Translates to: GESRKISLFQHH*ISISVPPATLI
Trigger: AATTAAGGTTGCAGGTGGAACTGAGATGCTAATCCAATGATGCTGAAATAGGGAGATTTTTCTAGATTCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR-3UTR CAA 90 bp TTAGAAAGACATTTAAATGTTGGCATCACCCAGGAAGCTCACCTCAAATTTATTGCTGAAATGCTAGCTTaGGTTTCAGAGAGAGACTTT +
Preference number: 3 (lower is better)
Translates to: LERHLNVGITQEAHLKFIAEMLA*VSERDF
Trigger: AAAGTCTCTCTCTGAAACCAAAGCTAGCATTTCAGC...AATAAATTTGAGGTGAGCTTCCTGGGTGATGCCAACATTTAAATGTCTTTCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp CTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTGGAGGTCTCCGGTCCCGTCACTGGTGAGCACTaGTGTTCGGCCCCCAGCGGA +
Preference number: 4 (lower is better)
Translates to: LMEVEPILHQLSLEVSGPVTGEH*CSAPSG
Trigger: TCCGCTGGGGGCCGAACAGCAGTGCTCACCAGTGAC...GGGACCGGAGACCTCCAGACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp ATCCTGGCTGCTCTTCTCTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCGCTCCCTTGCCCGCGTaGGGCTCCTTGTCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: ILAALLSWRLSPSSTSLVAPLPA*GSLSPP
Trigger: TGGCGGCGACAAGGAGCCCCACGCGGGCAAGGGAGC...GACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGCCAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp CTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTGGAGGTCTCCGGTCCCAGGCCCGCCATCATGTaGAGTGGCCACGCCCCTTAT +
Preference number: 4 (lower is better)
Translates to: LMEVEPILHQLSLEVSGPRPAIM*SGHAPY
Trigger: ATAAGGGGCGTGGCCACTTCACATGATGGCGGGCCT...GGGACCGGAGACCTCCAGACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp CTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTGGAGGTCTCCGGTCCCCTGCCTGCAACTCCCTaGCTTATGGCCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LMEVEPILHQLSLEVSGPLPATP*LMAPSS
Trigger: GGAGGAAGGGGCCATAAGCCAGGGAGTTGCAGGCAG...GGGACCGGAGACCTCCAGACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAACCGCTCCCGCTCCCTTaGCCGCGTGGGGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: WARSVSAICVWPSKFADKPLPLP*PRGAPC
Trigger: ACAAGGAGCCCCACGCGGGCAAGGGAGCGGGAGCGG...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp CTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTGGAGGTCTCCGGTCCCCGCCATCATGTGAAGTaGCCACGCCCCTTATGGACA +
Preference number: 4 (lower is better)
Translates to: LMEVEPILHQLSLEVSGPRHHVK*PRPLWT
Trigger: TGTCCATAAGGGGCGTGGCCACTTCACATGATGGCG...GGGACCGGAGACCTCCAGACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp CTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTGGAGGTCTCCGGTCCCGCTGCTCTTCTCTCATaGAGGTTGAGCCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: LMEVEPILHQLSLEVSGPAALLS*RLSPSS
Trigger: GGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGC...GGGACCGGAGACCTCCAGACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp CGCCCCTTATGGACAAAGTCAAGCCACCAACTCCCAAATGTATCAGTGCAGCTGTCTCCGGCCAGTCCCTaGGAGGCTCCTCTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: RPLWTKSSHQLPNVSVQLSPASP*EAPLGS
Trigger: GCTACCCAGAGGAGCCTCTCAGGGACTGGCCGGAGA...CAGCTGCACTGATACATTTGGGAGTTGGTGGCTTGACTTTGTCCATAAGGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp CGCCCCTTATGGACAAAGTCAAGCCACCAACTCCCAAATGTATCAGTGCAGCTGCTGGGCCTCGGCCCGTaGTCTGCAGTGGTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: RPLWTKSSHQLPNVSVQLLGLGP*SAVVCQ
Trigger: CTGACAGACCACTGCAGACCACGGGCCGAGGCCCAG...CAGCTGCACTGATACATTTGGGAGTTGGTGGCTTGACTTTGTCCATAAGGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CAA 72 bp TGCCCCCTGATCCTGGCTGCTCTTCTCTCATGGAGGTaGAGCCCATCCTCCACCAGCTTAGTCTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: CPLILAALLSWR*SPSSTSLVWRS
Trigger: AGACCTCCAGACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGCCAGGATCAGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp CTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTGGAGGTCTCCGGTCCCGCGTCCCCTCATCTCTaGCCCTTTTTATTTAAGGGA +
Preference number: 4 (lower is better)
Translates to: LMEVEPILHQLSLEVSGPASPHL*PFLFKG
Trigger: TCCCTTAAATAAAAAGGGCCAGAGATGAGGGGACGC...GGGACCGGAGACCTCCAGACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp CTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTGGAGGTCTCCGGTCCCCGAACACATTTAATGTaGTGCCGCCAAAATAGCTCC +
Preference number: 4 (lower is better)
Translates to: LMEVEPILHQLSLEVSGPRTHLM*CRQNSS
Trigger: GGAGCTATTTTGGCGGCATCACATTAAATGTGTTCG...GGGACCGGAGACCTCCAGACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp CTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTGGAGGTCTCCGGTCCCTTACAAATAAGTGAGTaGCTCTCACTGGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LMEVEPILHQLSLEVSGPLQISE*LSLVWW
Trigger: CCACCAGACCAGTGAGAGTCACTCACTTATTTGTAA...GGGACCGGAGACCTCCAGACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp ATCCTGGCTGCTCTTCTCTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCGCATTCCAGTGTCACTaGTTGGTGCCTCATGCACCT +
Preference number: 4 (lower is better)
Translates to: ILAALLSWRLSPSSTSLVAFQCH*LVPHAP
Trigger: AGGTGCATGAGGCACCAATCAGTGACACTGGAATGC...GACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGCCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGAGGCGGACGAAGCCATaGCCTGGCATGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVRRTKP*PGMDLK
Trigger: CTTCAAGTCCATGCCAGGTCATGGCTTCGTCCGCCT...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp CTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTGGAGGTCTCCGGTCCCAGAGAGAGACTTTATTaGAACTGTGACCACCGTCAC +
Preference number: 4 (lower is better)
Translates to: LMEVEPILHQLSLEVSGPRERLY*NCDHRH
Trigger: GTGACGGTGGTCACAGTTGCAATAAAGTCTCTCTCT...GGGACCGGAGACCTCCAGACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAAGGAAGTCCAGGTACATaGTGGGAGGCGGACGAAGCC +
Preference number: 4 (lower is better)
Translates to: WARSVSAICVWPSKFADKGSPGT*WEADEA
Trigger: GGCTTCGTCCGCCTCCCAGCATGTACCTGGACTTCC...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp CGCCCCTTATGGACAAAGTCAAGCCACCAACTCCCAAATGTATCAGTGCAGCTGGCTAGCATCCAGGAGTaGACTTGGTCACTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: RPLWTKSSHQLPNVSVQLASIQE*TWSLPA
Trigger: CGCAGGAAGTGACCAAGTTCACTCCTGGATGCTAGC...CAGCTGCACTGATACATTTGGGAGTTGGTGGCTTGACTTTGTCCATAAGGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp CTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTGGAGGTCTCCGGTCCCAAGAGATGCCCTGGCTaGATATCTGAAATAACACTG +
Preference number: 4 (lower is better)
Translates to: LMEVEPILHQLSLEVSGPKRCPG*ISEITL
Trigger: CAGTGTTATTTCAGATATTCAGCCAGGGCATCTCTT...GGGACCGGAGACCTCCAGACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp CTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTGGAGGTCTCCGGTCCCGGCTGCCAATCCTGGTaGAAAAATTTTTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LMEVEPILHQLSLEVSGPGCQSW*KNFSFQ
Trigger: CTGAAAGGAAAAATTTTTTCACCAGGATTGGCAGCC...GGGACCGGAGACCTCCAGACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp ATCCTGGCTGCTCTTCTCTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCGACCTGGCATGGACTTaGAGCAGTTCCCAAGTTGTT +
Preference number: 4 (lower is better)
Translates to: ILAALLSWRLSPSSTSLVDLAWT*SSSQVV
Trigger: AACAACTTGGGAACTGCTTCAAGTCCATGCCAGGTC...GACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGCCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGCCCCCTGATCCTGGCTaGTCTTCTCTCATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVPPDPG*SSLMEV
Trigger: AACCTCCATGAGAGAAGAGCAGCCAGGATCAGGGGG...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAAAGTCCAGGTACATGCTaGGAGGCGGACGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: WARSVSAICVWPSKFADKSPGTC*EADEAM
Trigger: CATGGCTTCGTCCGCCTCCCAGCATGTACCTGGACT...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp ATCCTGGCTGCTCTTCTCTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCCCCAAGCAGCTTTTCTaGTCCTCTCCTTCGTCATCA +
Preference number: 4 (lower is better)
Translates to: ILAALLSWRLSPSSTSLVPKQLF*SSPSSS
Trigger: TGATGACGAAGGAGAGGACCAGAAAAGCTGCTTGGG...GACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGCCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAAGGCAGGAGAATCGCTTaGACCTGGGAGGTAGAGGTT +
Preference number: 4 (lower is better)
Translates to: WARSVSAICVWPSKFADKGRRIA*TWEVEV
Trigger: AACCTCTACCTCCCAGGTTCAAGCGATTCTCCTGCC...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp ATCCTGGCTGCTCTTCTCTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCGTTGTACTTCTCCACTaGGGCTCTTTTAAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: ILAALLSWRLSPSSTSLVVVLLH*GSFKPR
Trigger: TCTGGGCTTAAAAGAGCCTCAGTGGAGAAGTACAAC...GACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGCCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGATTCTACAGGCTGCCTaGAACTCCCTGGCTTATGGC +
Preference number: 4 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVILQAA*NSLAYG
Trigger: GCCATAAGCCAGGGAGTTGCAGGCAGCCTGTAGAAT...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp CTAACCGTTCTTCCATATTTCACATTCCCCTCTGACTCTGACACTCTTCCAATTGCCCGTGGTCTGCAGTaGTCTGTCAGACGCGACGGC +
Preference number: 4 (lower is better)
Translates to: LTVLPYFTFPSDSDTLPIARGLQ*SVRRDG
Trigger: GCCGTCGCGTCTGACAGACCACTGCAGACCACGGGC...AATTGGAAGAGTGTCAGAGTCAGAGGGGAATGTGAAATATGGAAGAACGGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp CGCCCCTTATGGACAAAGTCAAGCCACCAACTCCCAAATGTATCAGTGCAGCTGCCTGAGAGGCTCCTCTaGGTAGCAGACTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: RPLWTKSSHQLPNVSVQLPERLL*VADFKV
Trigger: GACTTTGAAGTCTGCTACCCAGAGGAGCCTCTCAGG...CAGCTGCACTGATACATTTGGGAGTTGGTGGCTTGACTTTGTCCATAAGGGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGAGCCCTTTACGGCTCTaGGGATTCAGACACAGACAT +
Preference number: 4 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVSPLRL*GFRHRH
Trigger: ATGTCTGTGTCTGAATCCTCAGAGCCGTAAAGGGCT...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGTTCCCACATGGAGCTTaGGTCTCCTCCAACACATTC +
Preference number: 4 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVFPHGA*VSSNTF
Trigger: GAATGTGTTGGAGGAGACTCAAGCTCCATGTGGGAA...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp CTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCTGGAGGTCTCCGGTCCCAATATACTCTGGGGCTaGGTCTTCCTTTTAATGTTT +
Preference number: 4 (lower is better)
Translates to: LMEVEPILHQLSLEVSGPNILWG*VFLLMF
Trigger: AAACATTAAAAGGAAGACTCAGCCCCAGAGTATATT...GGGACCGGAGACCTCCAGACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp TTAGAAAGACATTTAAATGTTGGCATCACCCAGGAAGCTCACCTCAAATTTATTTCCTTGTCGCCGCCATaGCGGCCGCGCTGCGGACGG +
Preference number: 4 (lower is better)
Translates to: LERHLNVGITQEAHLKFISLSPP*RPRCGR
Trigger: CCGTCCGCAGCGCGGCCGGCATGGCGGCGACAAGGA...AATAAATTTGAGGTGAGCTTCCTGGGTGATGCCAACATTTAAATGTCTTTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp CGCCCCTTATGGACAAAGTCAAGCCACCAACTCCCAAATGTATCAGTGCAGCTGGACGAAGCCATGACCTaGCATGGACTTGAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: RPLWTKSSHQLPNVSVQLDEAMT*HGLEAV
Trigger: AACTGCTTCAAGTCCATGCCAGGTCATGGCTTCGTC...CAGCTGCACTGATACATTTGGGAGTTGGTGGCTTGACTTTGTCCATAAGGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAACTCAATTCTACAGGCTaGCTGCAACTCCCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: WARSVSAICVWPSKFADKLNSTG*LQLPGL
Trigger: TAAGCCAGGGAGTTGCAGGCAGCCTGTAGAATTGAG...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGAAAACCATCCATGCATaGCTGCATCCAGTGTACCTG +
Preference number: 4 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVKTIHA*LHPVYL
Trigger: CAGGTACACTGGATGCAGCCATGCATGGATGGTTTT...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAATGTCAGGTACACTTCTaGACAGCTCAAGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: WARSVSAICVWPSKFADKCQVHF*TAQVEP
Trigger: TGGCTCCACTTGAGCTGTCCAGAAGTGTACCTGACA...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGCACCTGACTCTCCCTTaGGTGGAAATGACTTTGGTT +
Preference number: 4 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVHLTLP*VEMTLV
Trigger: AACCAAAGTCATTTCCACCCAAGGGAGAGTCAGGTG...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp ATCCTGGCTGCTCTTCTCTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCCCTACAGAATTCAGGTaGTTCATCATGAAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: ILAALLSWRLSPSSTSLVPTEFR*FIMKLK
Trigger: TTTGAGCTTCATGATGAATCACCTGAATTCTGTAGG...GACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGCCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp ATCCTGGCTGCTCTTCTCTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCGGTTGCACAACAATGTaGATATGCTTAATGTCACTG +
Preference number: 4 (lower is better)
Translates to: ILAALLSWRLSPSSTSLVGCTTM*ICLMSL
Trigger: CAGTGACATTAAGCATATTCACATTGTTGTGCAACC...GACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGCCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAATCTCTAAAGAATTCTTaGCCCCCGCCCACAACACAA +
Preference number: 4 (lower is better)
Translates to: WARSVSAICVWPSKFADKSLKNS*PPPTTQ
Trigger: TTGTGTTGTGGGCGGGGGGCAAGAATTCTTTAGAGA...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp ATCCTGGCTGCTCTTCTCTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCAGCCTTGTACTAATATaGATACAACCCCTCAGTATG +
Preference number: 4 (lower is better)
Translates to: ILAALLSWRLSPSSTSLVSLVLI*IQPLSM
Trigger: CATACTGAGGGGTTGTATGCATATTAGTACAAGGCT...GACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGCCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGTCAGCCATTTGTGTTTaGCCCAGTAAGTTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVSAICV*PSKFAD
Trigger: GTCAGCAAACTTACTGGGCCAAACACAAATGGCTGA...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp CGCCCCTTATGGACAAAGTCAAGCCACCAACTCCCAAATGTATCAGTGCAGCTGCCCTGGCTGAATATCTaGAATAACACTGATCTGAGA +
Preference number: 4 (lower is better)
Translates to: RPLWTKSSHQLPNVSVQLPWLNI*NNTDLR
Trigger: TCTCAGATCAGTGTTATTTCAGATATTCAGCCAGGG...CAGCTGCACTGATACATTTGGGAGTTGGTGGCTTGACTTTGTCCATAAGGGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp CGCCCCTTATGGACAAAGTCAAGCCACCAACTCCCAAATGTATCAGTGCAGCTGCTTTTCTTTCATCCATaGTGGAAAAGAGATGCCCTG +
Preference number: 4 (lower is better)
Translates to: RPLWTKSSHQLPNVSVQLLFFHP*WKRDAL
Trigger: CAGGGCATCTCTTTTCCATCATGGATGAAAGAAAAG...CAGCTGCACTGATACATTTGGGAGTTGGTGGCTTGACTTTGTCCATAAGGGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAATCAGGTGATTCATCATaGAGCTCAAAGGATCAGAGG +
Preference number: 4 (lower is better)
Translates to: WARSVSAICVWPSKFADKSGDSS*SSKDQR
Trigger: CCTCTGATCCTTTGAGCTTCATGATGAATCACCTGA...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp TTAGAAAGACATTTAAATGTTGGCATCACCCAGGAAGCTCACCTCAAATTTATTGACCACCGTCACTGGTaGGCACTGCTGTTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: LERHLNVGITQEAHLKFIDHRHW*ALLFGP
Trigger: GGGGCCGAACAGCAGTGCTCACCAGTGACGGTGGTC...AATAAATTTGAGGTGAGCTTCCTGGGTGATGCCAACATTTAAATGTCTTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGCATCTCAGTTCCACCTaGAACCTTAATTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVHLSST*NLNSPF
Trigger: GAAAGGAGAATTAAGGTTGCAGGTGGAACTGAGATG...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp CAAGTGGAGCCAAAATTTTGGAGCAACAATTCTATAAGTATCAGCCACAGCAGCAGGTGTTGGCAGGGCTaGGTTCCTTCTGGAGGCTAT +
Preference number: 4 (lower is better)
Translates to: QVEPKFWSNNSISISHSSRCWQG*VPSGGY
Trigger: ATAGCCTCCAGAAGGAACGCAGCCCTGCCAACACCT...GCTGCTGTGGCTGATACTTATAGAATTGTTGCTCCAAAATTTTGGCTCCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAATCCATGAGCTTCAAGTaGAGAGACATGGTGTACACT +
Preference number: 4 (lower is better)
Translates to: WARSVSAICVWPSKFADKSMSFK*RDMVYT
Trigger: AGTGTACACCATGTCTCTGCACTTGAAGCTCATGGA...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp ACCTGCTTTAAAAAGAGGATCTGTGGTGTGTCCTTCTGTATAGTACAAAGAAGACACAGCCCTCCTCCATaGTGGCTCTTGGGCCACACT +
Preference number: 4 (lower is better)
Translates to: TCFKKRICGVSFCIVQRRHSPPP*WLLGHT
Trigger: AGTGTGGCCCAAGAGCCAGCATGGAGGAGGGCTGTG...TCTTCTTTGTACTATACAGAAGGACACACCACAGATCCTCTTTTTAAAGCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAATCCTTCTGGAGGCTATaGGGAAGTTTCTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: WARSVSAICVWPSKFADKSFWRL*GSFCFL
Trigger: AAGGAAACAGAAACTTCCCCATAGCCTCCAGAAGGA...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp CAAGTGGAGCCAAAATTTTGGAGCAACAATTCTATAAGTATCAGCCACAGCAGCGGGCTGCGTTCCTTCTaGAGGCTATGGGGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: QVEPKFWSNNSISISHSSGLRSF*RLWGSF
Trigger: GAAACTTCCCCATAGCCTCCAGAAGGAACGCAGCCC...GCTGCTGTGGCTGATACTTATAGAATTGTTGCTCCAAAATTTTGGCTCCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAATCTGGACAGCTCAAGTaGAGCCAAAATTTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: WARSVSAICVWPSKFADKSGQLK*SQNFGA
Trigger: TGCTCCAAAATTTTGGCTCCACTTGAGCTGTCCAGA...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp ATCCTGGCTGCTCTTCTCTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCAATGATAAGGCACAATaGGGTAAAGTCACAAACCAT +
Preference number: 4 (lower is better)
Translates to: ILAALLSWRLSPSSTSLVNDKAQ*GKVTNH
Trigger: ATGGTTTGTGACTTTACCCCATTGTGCCTTATCATT...GACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGCCAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAACTCTTGCACAATAACTaGGTAAATCAACCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: WARSVSAICVWPSKFADKLLHNN*VNQPLP
Trigger: AGGCAGAGGTTGATTTACTCAGTTATTGTGCAAGAG...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAATTCCAGAATGGCATCTaGAAAAAGGGTGTTGCACAT +
Preference number: 4 (lower is better)
Translates to: WARSVSAICVWPSKFADKFQNGI*KKGVAH
Trigger: ATGTGCAACACCCTTTTTTCAGATGCCATTCTGGAA...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAAGACTGTAGAGGTCAATaGAGAACTCTTGTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: WARSVSAICVWPSKFADKDCRGQ*RTLVSV
Trigger: CACAGAAACAAGAGTTCTTCATTGACCTCTACAGTC...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp CAAGTGGAGCCAAAATTTTGGAGCAACAATTCTATAAGTATCAGCCACAGCAGCCTAACTCTCTCCTCCTaGCTCCCTCCTAGGTTGTAC +
Preference number: 4 (lower is better)
Translates to: QVEPKFWSNNSISISHSSLTLSS*LPPRLY
Trigger: GTACAACCTAGGAGGGAGTCAGGAGGAGAGAGTTAG...GCTGCTGTGGCTGATACTTATAGAATTGTTGCTCCAAAATTTTGGCTCCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp CAAGTGGAGCCAAAATTTTGGAGCAACAATTCTATAAGTATCAGCCACAGCAGCAACGTTAATGCCCCCTaGTCCTGGCTGCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QVEPKFWSNNSISISHSSNVNAP*SWLLFS
Trigger: AGAGAAGAGCAGCCAGGATCAGGGGGCATTAACGTT...GCTGCTGTGGCTGATACTTATAGAATTGTTGCTCCAAAATTTTGGCTCCACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGCATCCAATACCCATTTaGAGAAAAGTCCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVHPIPI*RKVLGK
Trigger: TTTTCCCAGGACTTTTCTGCAAATGGGTATTGGATG...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp CAAGTGGAGCCAAAATTTTGGAGCAACAATTCTATAAGTATCAGCCACAGCAGCTCAGTCTGTACCAGCTaGTTCTCCTCACCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: QVEPKFWSNNSISISHSSSVCTS*FSSPCP
Trigger: AGGGCAAGGTGAGGAGAAGCAGCTGGTACAGACTGA...GCTGCTGTGGCTGATACTTATAGAATTGTTGCTCCAAAATTTTGGCTCCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp CTAACCGTTCTTCCATATTTCACATTCCCCTCTGACTCTGACACTCTTCCAATTTGGCCACGCCCCTTATaGACAAAGTCAAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: LTVLPYFTFPSDSDTLPIWPRPL*TKSSHQ
Trigger: TTGGTGGCTTGACTTTGTCCATAAGGGGCGTGGCCA...AATTGGAAGAGTGTCAGAGTCAGAGGGGAATGTGAAATATGGAAGAACGGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp ATCCTGGCTGCTCTTCTCTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCGTGGAGCCAAAATTTTaGAGCAACAATTCTATAAGT +
Preference number: 4 (lower is better)
Translates to: ILAALLSWRLSPSSTSLVVEPKF*SNNSIS
Trigger: ACTTATAGAATTGTTGCTCCAAAATTTTGGCTCCAC...GACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGCCAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CAA 72 bp CCCTTTACGGCTCTGAGGATTCAGACACAGACATCTTaGGGGAGCATAGGGCATTATTCTGCCTACCATAAT +
Preference number: 4 (lower is better)
Translates to: PFTALRIQTQTS*GSIGHYSAYHN
Trigger: ATTATGGTAGGCAGAATAATGCCCTATGCTCCCCAAAGATGTCTGTGTCTGAATCCTCAGAGCCGTAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAACCAAAACTGTACTGCTaGATCCAATTACAACCTTGT +
Preference number: 4 (lower is better)
Translates to: WARSVSAICVWPSKFADKPKLYC*IQLQPC
Trigger: ACAAGGTTGTAATTGGATTCAGCAGTACAGTTTTGG...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGTTCATTGTTACCCTGTaGAATACACACCAAATGGAA +
Preference number: 4 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVFIVTL*NTHQME
Trigger: TTCCATTTGGTGTGTATTTCACAGGGTAACAATGAA...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp CGCCCCTTATGGACAAAGTCAAGCCACCAACTCCCAAATGTATCAGTGCAGCTGATTATCTTACAGTTCTaGAGATTAGAGGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: RPLWTKSSHQLPNVSVQLIILQF*RLEVQH
Trigger: GTGTTGGACCTCTAATCTGCAGAACTGTAAGATAAT...CAGCTGCACTGATACATTTGGGAGTTGGTGGCTTGACTTTGTCCATAAGGGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp CAAGTGGAGCCAAAATTTTGGAGCAACAATTCTATAAGTATCAGCCACAGCAGCCATTCTATAGCAGTCTaGTCACACAGCCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QVEPKFWSNNSISISHSSHSIAV*SHSPPP
Trigger: TGGAGGAGGGCTGTGTGAGCAGACTGCTATAGAATG...GCTGCTGTGGCTGATACTTATAGAATTGTTGCTCCAAAATTTTGGCTCCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAAGAAATAACACTGATCTaGGAGCATCATAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: WARSVSAICVWPSKFADKEITLI*EHHSYL
Trigger: GAGATAACTATGATGCTCTCAGATCAGTGTTATTTC...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp CAAGTGGAGCCAAAATTTTGGAGCAACAATTCTATAAGTATCAGCCACAGCAGCTCACCAGGGTGGCTCTaGATTAATAGTTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QVEPKFWSNNSISISHSSSPGWL*INSFLG
Trigger: CCCCAAGAAACTATTAATTCAGAGCCACCCTGGTGA...GCTGCTGTGGCTGATACTTATAGAATTGTTGCTCCAAAATTTTGGCTCCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp CTAACCGTTCTTCCATATTTCACATTCCCCTCTGACTCTGACACTCTTCCAATTCTCCAACACATTCCATaGGCTTCAAGTGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: LTVLPYFTFPSDSDTLPILQHIP*ASSAET
Trigger: TGTCTCTGCACTTGAAGCTCATGGAATGTGTTGGAG...AATTGGAAGAGTGTCAGAGTCAGAGGGGAATGTGAAATATGGAAGAACGGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAATCAAGGATATTCTCTTaGCTAAACTTCCCAAGAATC +
Preference number: 4 (lower is better)
Translates to: WARSVSAICVWPSKFADKSRIFS*LNFPRI
Trigger: GATTCTTGGGAAGTTTAGTCAAGAGAATATCCTTGA...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp CTAACCGTTCTTCCATATTTCACATTCCCCTCTGACTCTGACACTCTTCCAATTACAGTGTCTAAGGCTTaGCTTGTAGCTAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: LTVLPYFTFPSDSDTLPITVSKA*LVASIQ
Trigger: CTGGATGCTAGCTACAAGCCAAGCCTTAGACACTGT...AATTGGAAGAGTGTCAGAGTCAGAGGGGAATGTGAAATATGGAAGAACGGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp CAAGTGGAGCCAAAATTTTGGAGCAACAATTCTATAAGTATCAGCCACAGCAGCTCCAGTGTCACTGATTaGTGCCTCATGCACCTTTTC +
Preference number: 4 (lower is better)
Translates to: QVEPKFWSNNSISISHSSSSVTD*CLMHLF
Trigger: GAAAAGGTGCATGAGGCACCAATCAGTGACACTGGA...GCTGCTGTGGCTGATACTTATAGAATTGTTGCTCCAAAATTTTGGCTCCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp ACCTGCTTTAAAAAGAGGATCTGTGGTGTGTCCTTCTGTATAGTACAAAGAAGAAGCGATGACAAGAAATaGGCCAGGAGTGTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TCFKKRICGVSFCIVQRRSDDKK*ARSVSA
Trigger: GGCTGAGACACTCCTGGCCCATTTCTTGTCATCGCT...TCTTCTTTGTACTATACAGAAGGACACACCACAGATCCTCTTTTTAAAGCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CAA 72 bp AAACAGGCAGGGACTGTAGAGGTCAATGAAGAACTCTaGTTTCTGTGGCTGAGCTCATTAATCTTCAACCAG +
Preference number: 4 (lower is better)
Translates to: KQAGTVEVNEEL*FLWLSSLIFNQ
Trigger: CTGGTTGAAGATTAATGAGCTCAGCCACAGAAACAAGAGTTCTTCATTGACCTCTACAGTCCCTGCCTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp TTAGAAAGACATTTAAATGTTGGCATCACCCAGGAAGCTCACCTCAAATTTATTTTCTCTCATGGAGGTTaGGCCCATCCTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: LERHLNVGITQEAHLKFIFSHGG*AHPPPA
Trigger: AGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAA...AATAAATTTGAGGTGAGCTTCCTGGGTGATGCCAACATTTAAATGTCTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp CTAACCGTTCTTCCATATTTCACATTCCCCTCTGACTCTGACACTCTTCCAATTCTGGGGTTCTTTCCATaGATCTTAGTCCAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LTVLPYFTFPSDSDTLPILGFFP*ILVQQK
Trigger: TTTCTGCTGGACTAAGATTCATGGAAAGAACCCCAG...AATTGGAAGAGTGTCAGAGTCAGAGGGGAATGTGAAATATGGAAGAACGGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp CTAACCGTTCTTCCATATTTCACATTCCCCTCTGACTCTGACACTCTTCCAATTCATCACAAAGCCTTTTaGCATTCTCCAGACAGTGTC +
Preference number: 4 (lower is better)
Translates to: LTVLPYFTFPSDSDTLPIHHKAF*HSPDSV
Trigger: GACACTGTCTGGAGAATGGCAAAAGGCTTTGTGATG...AATTGGAAGAGTGTCAGAGTCAGAGGGGAATGTGAAATATGGAAGAACGGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp ACCTGCTTTAAAAAGAGGATCTGTGGTGTGTCCTTCTGTATAGTACAAAGAAGAGCGGACTTAAAAGACTaGAATGTGGTAGTGGCGGTC +
Preference number: 4 (lower is better)
Translates to: TCFKKRICGVSFCIVQRRADLKD*NVVVAV
Trigger: GACCGCCACTACCACATTCCAGTCTTTTAAGTCCGC...TCTTCTTTGTACTATACAGAAGGACACACCACAGATCCTCTTTTTAAAGCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAAACATGCAGCTCCTTCTaGCTACTTAATTTGTTATAT +
Preference number: 4 (lower is better)
Translates to: WARSVSAICVWPSKFADKTCSSF*LLNLLY
Trigger: ATATAACAAATTAAGTAGCCAGAAGGAGCTGCATGT...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp ACCTGCTTTAAAAAGAGGATCTGTGGTGTGTCCTTCTGTATAGTACAAAGAAGAGAGTTCAGATCAGCCTaGCTAAATGGTGAAACCCCG +
Preference number: 4 (lower is better)
Translates to: TCFKKRICGVSFCIVQRREFRSA*LNGETP
Trigger: CGGGGTTTCACCATTTAGCCAGGCTGATCTGAACTC...TCTTCTTTGTACTATACAGAAGGACACACCACAGATCCTCTTTTTAAAGCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp TTAGAAAGACATTTAAATGTTGGCATCACCCAGGAAGCTCACCTCAAATTTATTCTCCATGCTGGCTCTTaGGCCACACTGTTCCCACAT +
Preference number: 4 (lower is better)
Translates to: LERHLNVGITQEAHLKFILHAGS*ATLFPH
Trigger: ATGTGGGAACAGTGTGGCCCAAGAGCCAGCATGGAG...AATAAATTTGAGGTGAGCTTCCTGGGTGATGCCAACATTTAAATGTCTTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp CAAGTGGAGCCAAAATTTTGGAGCAACAATTCTATAAGTATCAGCCACAGCAGCCTCTCACTGGTCTGGTaGCAGCAAAATGACTTAACA +
Preference number: 4 (lower is better)
Translates to: QVEPKFWSNNSISISHSSLSLVW*QQNDLT
Trigger: TGTTAAGTCATTTTGCTGCCACCAGACCAGTGAGAG...GCTGCTGTGGCTGATACTTATAGAATTGTTGCTCCAAAATTTTGGCTCCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp CAAGTGGAGCCAAAATTTTGGAGCAACAATTCTATAAGTATCAGCCACAGCAGCCTGGTGGCAGCAAAATaGCTTAACAATCTAAGACCT +
Preference number: 4 (lower is better)
Translates to: QVEPKFWSNNSISISHSSLVAAK*LNNLRP
Trigger: AGGTCTTAGATTGTTAAGTCATTTTGCTGCCACCAG...GCTGCTGTGGCTGATACTTATAGAATTGTTGCTCCAAAATTTTGGCTCCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp CTAACCGTTCTTCCATATTTCACATTCCCCTCTGACTCTGACACTCTTCCAATTAGGGAGTCACAGATGTaGCTACTAGGAATCACATTA +
Preference number: 4 (lower is better)
Translates to: LTVLPYFTFPSDSDTLPIRESQM*LLGITL
Trigger: TAATGTGATTCCTAGTAGGCACATCTGTGACTCCCT...AATTGGAAGAGTGTCAGAGTCAGAGGGGAATGTGAAATATGGAAGAACGGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CCA 90 bp ACCTGCTTTAAAAAGAGGATCTGTGGTGTGTCCTTCTGTATAGTACAAAGAAGATCAAGTGCAGAGACATaGTGTACACTTCGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: TCFKKRICGVSFCIVQRRSSAET*CTLRAV
Trigger: AACAGCCCGAAGTGTACACCATGTCTCTGCACTTGA...TCTTCTTTGTACTATACAGAAGGACACACCACAGATCCTCTTTTTAAAGCAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CAA 72 bp AAAGGTCCTAATTCCTTCCATGCTGAAATGCTAGCTTaGGTTTCAGAGAGAGACTTTATTGCAACTGTGACC +
Preference number: 4 (lower is better)
Translates to: KGPNSFHAEMLA*VSERDFIATVT
Trigger: GGTCACAGTTGCAATAAAGTCTCTCTCTGAAACCAAAGCTAGCATTTCAGCATGGAAGGAATTAGGACCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CAA 72 bp GACTTTCACCTGACTCTCCCTTGGGTGGAAATGACTTaGGTTCAAGACCATGAAGACATTCAAGAAATTCAA +
Preference number: 4 (lower is better)
Translates to: DFHLTLPWVEMT*VQDHEDIQEIQ
Trigger: TTGAATTTCTTGAATGTCTTCATGGTCTTGAACCAAAGTCATTTCCACCCAAGGGAGAGTCAGGTGAAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp CTAACCGTTCTTCCATATTTCACATTCCCCTCTGACTCTGACACTCTTCCAATTCCAATTACAACCTTGTaGAAACAGCAGTTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LTVLPYFTFPSDSDTLPIPITTL*KQQFFR
Trigger: CCTGAAAAACTGCTGTTTTCACAAGGTTGTAATTGG...AATTGGAAGAGTGTCAGAGTCAGAGGGGAATGTGAAATATGGAAGAACGGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp ACCTGCTTTAAAAAGAGGATCTGTGGTGTGTCCTTCTGTATAGTACAAAGAAGATGTAGTACACACGACTaGTCATCCCCATTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: TCFKKRICGVSFCIVQRRCSTHD*SSPLQK
Trigger: CTTTTGCAATGGGGATGATCAGTCGTGTGTACTACA...TCTTCTTTGTACTATACAGAAGGACACACCACAGATCCTCTTTTTAAAGCAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp CTAACCGTTCTTCCATATTTCACATTCCCCTCTGACTCTGACACTCTTCCAATTGATAATATTCTAAATTaGGCCCAGAAGCCACCCATA +
Preference number: 4 (lower is better)
Translates to: LTVLPYFTFPSDSDTLPIDNILN*AQKPPI
Trigger: TATGGGTGGCTTCTGGGCTCAATTTAGAATATTATC...AATTGGAAGAGTGTCAGAGTCAGAGGGGAATGTGAAATATGGAAGAACGGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp ACCTGCTTTAAAAAGAGGATCTGTGGTGTGTCCTTCTGTATAGTACAAAGAAGAGGAATCACATTACACTaGAACTTCCACCACACCCAA +
Preference number: 4 (lower is better)
Translates to: TCFKKRICGVSFCIVQRRGITLH*NFHHTQ
Trigger: TTGGGTGTGGTGGAAGTTTCAGTGTAATGTGATTCC...TCTTCTTTGTACTATACAGAAGGACACACCACAGATCCTCTTTTTAAAGCAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp CTAACCGTTCTTCCATATTTCACATTCCCCTCTGACTCTGACACTCTTCCAATTCACCATTTCAGCTTGTaGCCTGAATATAAATGTAGC +
Preference number: 4 (lower is better)
Translates to: LTVLPYFTFPSDSDTLPIHHFSL*PEYKCS
Trigger: GCTACATTTATATTCAGGGCACAAGCTGAAATGGTG...AATTGGAAGAGTGTCAGAGTCAGAGGGGAATGTGAAATATGGAAGAACGGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp CTAACCGTTCTTCCATATTTCACATTCCCCTCTGACTCTGACACTCTTCCAATTTCTACTTACCCACAATaGTACCAAGATGTTACAACA +
Preference number: 4 (lower is better)
Translates to: LTVLPYFTFPSDSDTLPISTYPQ*YQDVTT
Trigger: TGTTGTAACATCTTGGTATCATTGTGGGTAAGTAGA...AATTGGAAGAGTGTCAGAGTCAGAGGGGAATGTGAAATATGGAAGAACGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp TTAGAAAGACATTTAAATGTTGGCATCACCCAGGAAGCTCACCTCAAATTTATTCCATCCATGCATGGCTaGATCCAGTGTACCTGTAAT +
Preference number: 4 (lower is better)
Translates to: LERHLNVGITQEAHLKFIPSMHG*IQCTCN
Trigger: ATTACAGGTACACTGGATGCAGCCATGCATGGATGG...AATAAATTTGAGGTGAGCTTCCTGGGTGATGCCAACATTTAAATGTCTTTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp TTAGAAAGACATTTAAATGTTGGCATCACCCAGGAAGCTCACCTCAAATTTATTATTGTGCCACTGCACTaGAGCCTGAGCAAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: LERHLNVGITQEAHLKFIIVPLH*SLSKKS
Trigger: ACTCTTTTTGCTCAGGCTGCAGTGCAGTGGCACAAT...AATAAATTTGAGGTGAGCTTCCTGGGTGATGCCAACATTTAAATGTCTTTCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp TTAGAAAGACATTTAAATGTTGGCATCACCCAGGAAGCTCACCTCAAATTTATTTCCCAAATGTATCAGTaGAGCTGCTTCAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: LERHLNVGITQEAHLKFISQMYQ*SCFRGN
Trigger: ATTTCCTCTGAAGCAGCTGCACTGATACATTTGGGA...AATAAATTTGAGGTGAGCTTCCTGGGTGATGCCAACATTTAAATGTCTTTCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp TTAGAAAGACATTTAAATGTTGGCATCACCCAGGAAGCTCACCTCAAATTTATTAGTGTCACTGATTGGTaGCTCATGCACCTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LERHLNVGITQEAHLKFISVTDW*LMHLFK
Trigger: TTTGAAAAGGTGCATGAGGCACCAATCAGTGACACT...AATAAATTTGAGGTGAGCTTCCTGGGTGATGCCAACATTTAAATGTCTTTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CAA 72 bp TTCTGTATAGTACAAAGAAGAGCATGTCGTTTCAATTaGCTTGTAAAGACATACAGGAGGAATGGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: FCIVQRRACRFN*LVKTYRRNGLN
Trigger: GTTGAGACCATTCCTCCTGTATGTCTTTACAAGCAAATTGAAACGACATGCTCTTCTTTGTACTATACAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR TCA 90 bp TTAGAAAGACATTTAAATGTTGGCATCACCCAGGAAGCTCACCTCAAATTTATTACACTGTCAGTTAAATaGCAGGGGTTATACAAAACC +
Preference number: 4 (lower is better)
Translates to: LERHLNVGITQEAHLKFITLSVK*QGLYKT
Trigger: GGTTTTGTATAACCCCTGTCATTTAACTGACAGTGT...AATAAATTTGAGGTGAGCTTCCTGGGTGATGCCAACATTTAAATGTCTTTCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
3UTR CAA 72 bp CGGCTAAAGGTAGCTTTTCATAACAGATGTAAATATTaGTTCTACTTACCCACAATGATACCAAGATGTTAC +
Preference number: 4 (lower is better)
Translates to: RLKVAFHNRCKY*FYLPTMIPRCY
Trigger: GTAACATCTTGGTATCATTGTGGGTAAGTAGAACAAATATTTACATCTGTTATGAAAAGCTACCTTTAGCCG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR GCA 90 bp TTAGAAAGACATTTAAATGTTGGCATCACCCAGGAAGCTCACCTCAAATTTATTCTTTTGAATTTTCTCTaGAGATATCCAATCCACCAT +
Preference number: 4 (lower is better)
Translates to: LERHLNVGITQEAHLKFILLNFL*RYPIHH
Trigger: ATGGTGGATTGGATATCTGCAGAGAAAATTCAAAAG...AATAAATTTGAGGTGAGCTTCCTGGGTGATGCCAACATTTAAATGTCTTTCTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS CCA 90 bp TTCCTGCGGCGGGAGCGCCAGACCGCTCCCGCTCCCTTGCCCGCGTaGGGCTCCTTGTCGCCGCCATGCCGGCCGCGCTGCGGACGGGCG +
Preference number: 5 (lower is better)
Translates to: FLRRERQTAPAPLPA*GSLSPPCRPRCGRA
Trigger: CGCCCGTCCGCAGCGCGGCCGGCATGGCGGCGACAAGGAGCCCCACGCGGGCAAGGGAGCGGGAGCGGTCTGGCGCTCCCGCCGCAGGAA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS GCA 90 bp CCCTTGCCCGCGTGGGGCTCCTTGTCGCCGCCATGCCGGCCGCGCTaGGGACGGGCGCTGGGCCTCGGCCCGTGGTCTGCAGTGGTCTGT +
Preference number: 5 (lower is better)
Translates to: PLPAWGSLSPPCRPR*GRALGLGPWSAVVC
Trigger: ACAGACCACTGCAGACCACGGGCCGAGGCCCAGCGCCCGTCCGCAGCGCGGCCGGCATGGCGGCGACAAGGAGCCCCACGCGGGCAAGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS CCA 90 bp GGGGCTCCTTGTCGCCGCCATGCCGGCCGCGCTGCGGACGGGCGCTaGGCCTCGGCCCGTGGTCTGCAGTGGTCTGTCAGACGCGACGGC +
Preference number: 5 (lower is better)
Translates to: GAPCRRHAGRAADGR*ASARGLQWSVRRDG
Trigger: GCCGTCGCGTCTGACAGACCACTGCAGACCACGGGCCGAGGCCCAGCGCCCGTCCGCAGCGCGGCCGGCATGGCGGCGACAAGGAGCCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS GCA 90 bp TTGGTCACTTCCTGCGGCGGGAGCGCCAGACCGCTCCCGCTCCCTTaGCCGCGTGGGGCTCCTTGTCGCCGCCATGCCGGCCGCGCTGCG +
Preference number: 5 (lower is better)
Translates to: LVTSCGGSARPLPLP*PRGAPCRRHAGRAA
Trigger: CGCAGCGCGGCCGGCATGGCGGCGACAAGGAGCCCCACGCGGGCAAGGGAGCGGGAGCGGTCTGGCGCTCCCGCCGCAGGAAGTGACCAA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS CCA 90 bp TCACTGGTGAGCACTGCTGTTCGGCCCCCAGCGGACTTAAAAGACTaGAATGTGGTAGTGGCGGTCGTTCTCGGTCAGCAGGGAGATCTC +
Preference number: 5 (lower is better)
Translates to: SLVSTAVRPPADLKD*NVVVAVVLGQQGDL
Trigger: GAGATCTCCCTGCTGACCGAGAACGACCGCCACTACCACATTCCAGTCTTTTAAGTCCGCTGGGGGCCGAACAGCAGTGCTCACCAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CAA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGCCTCCATGCTGGCTCTaGGGCCACACTGTTCCCACA +
Preference number: 5 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVPPCWL*GHTVPT
Trigger: TGTGGGAACAGTGTGGCCCAAGAGCCAGCATGGAGG...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS CCA 90 bp CTCGGTCAGCAGGGAGATCTCCGGCCAGTCCCTGAGAGGCTCCTCTaGGTAGCAGACTTCAAAGTCTCTGGAGTTAAACTTGAACAGTCT +
Preference number: 5 (lower is better)
Translates to: LGQQGDLRPVPERLL*VADFKVSGVKLEQS
Trigger: AGACTGTTCAAGTTTAACTCCAGAGACTTTGAAGTCTGCTACCCAGAGGAGCCTCTCAGGGACTGGCCGGAGATCTCCCTGCTGACCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CAA 90 bp ACCTGCTTTAAAAAGAGGATCTGTGGTGTGTCCTTCTGTATAGTACAAAGAAGAACCGCTCCCGCTCCCTaGCCCGCGTGGGGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: TCFKKRICGVSFCIVQRRTAPAP*PAWGSL
Trigger: CAAGGAGCCCCACGCGGGCAAGGGAGCGGGAGCGGT...TCTTCTTTGTACTATACAGAAGGACACACCACAGATCCTCTTTTTAAAGCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CAA 90 bp CGCCCCTTATGGACAAAGTCAAGCCACCAACTCCCAAATGTATCAGTGCAGCTGGCCTTCCTCATCAGCTaGTTACGGGGTGTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: RPLWTKSSHQLPNVSVQLAFLIS*LRGVSP
Trigger: AGGAGAGACACCCCGTAACAAGCTGATGAGGAAGGC...CAGCTGCACTGATACATTTGGGAGTTGGTGGCTTGACTTTGTCCATAAGGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS GCA 90 bp GAGAGAGACTTTATTGCAACTGTGACCACCGTCACTGGTGAGCACTaGTGTTCGGCCCCCAGCGGACTTAAAAGACTGGAATGTGGTAGT +
Preference number: 5 (lower is better)
Translates to: ERDFIATVTTVTGEH*CSAPSGLKRLECGS
Trigger: ACTACCACATTCCAGTCTTTTAAGTCCGCTGGGGGCCGAACAGCAGTGCTCACCAGTGACGGTGGTCACAGTTGCAATAAAGTCTCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CAA 90 bp ATCCTGGCTGCTCTTCTCTCATGGAGGTTGAGCCCATCCTCCACCAGCTTAGTCGTCAATGAAGAACTCTaGTTTCTGTGGCTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: ILAALLSWRLSPSSTSLVVNEEL*FLWLSS
Trigger: TGAGCTCAGCCACAGAAACAAGAGTTCTTCATTGAC...GACTAAGCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAAGAGCAGCCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CAA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGGTTCCCACATGGAGCTaGAGTCTCCTCCAACACATT +
Preference number: 5 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVVPTWS*SLLQHI
Trigger: AATGTGTTGGAGGAGACTCAAGCTCCATGTGGGAAC...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CAA 90 bp CGCCCCTTATGGACAAAGTCAAGCCACCAACTCCCAAATGTATCAGTGCAGCTGACATCACAAAGCCTTTaGCCATTCTCCAGACAGTGT +
Preference number: 5 (lower is better)
Translates to: RPLWTKSSHQLPNVSVQLTSQSL*PFSRQC
Trigger: ACACTGTCTGGAGAATGGCAAAAGGCTTTGTGATGT...CAGCTGCACTGATACATTTGGGAGTTGGTGGCTTGACTTTGTCCATAAGGGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CAA 90 bp CAAGTGGAGCCAAAATTTTGGAGCAACAATTCTATAAGTATCAGCCACAGCAGCCTTCTCTCATGGAGGTaGAGCCCATCCTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: QVEPKFWSNNSISISHSSLLSWR*SPSSTS
Trigger: GCTGGTGGAGGATGGGCTCAACCTCCATGAGAGAAG...GCTGCTGTGGCTGATACTTATAGAATTGTTGCTCCAAAATTTTGGCTCCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CAA 90 bp CGCCCCTTATGGACAAAGTCAAGCCACCAACTCCCAAATGTATCAGTGCAGCTGCCATCCAATACCCATTaGCAGAAAAGTCCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: RPLWTKSSHQLPNVSVQLPSNTH*QKSPGK
Trigger: TTTCCCAGGACTTTTCTGCAAATGGGTATTGGATGG...CAGCTGCACTGATACATTTGGGAGTTGGTGGCTTGACTTTGTCCATAAGGGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CAA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAAGAAGCAGTTCCCAAGTaGTTTCCCAGAGTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: WARSVSAICVWPSKFADKEAVPK*FPRVCL
Trigger: AAGACAGACTCTGGGAAACAACTTGGGAACTGCTTC...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS TCA 90 bp GCTCTAGTCCACATGTGTCGCCTACAGAATTCAGGTGATTCATCATaGAGCTCAAAGGATCAGAGGATGTCTCCCTGGAAAACAGGAGTC +
Preference number: 5 (lower is better)
Translates to: ALVHMCRLQNSGDSS*SSKDQRMSPWKTGV
Trigger: GACTCCTGTTTTCCAGGGAGACATCCTCTGATCCTTTGAGCTTCATGATGAATCACCTGAATTCTGTAGGCGACACATGTGGACTAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CAA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGGATTGGAGCACTTCATaGTTACCCTGTGAAATACAC +
Preference number: 5 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVDWSTS*LPCEIH
Trigger: GTGTATTTCACAGGGTAACAATGAAGTGCTCCAATC...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS CCA 90 bp TCAGCTTGTGCCCTGAATATAAATGTAGCCTCCGGAAGTAGCAGATaGCAGCCACCAGAAATGAAACTGCCAACATCACAAAGCCTTTTG +
Preference number: 5 (lower is better)
Translates to: SACALNINVASGSSR*QPPEMKLPTSQSLL
Trigger: CAAAAGGCTTTGTGATGTTGGCAGTTTCATTTCTGGTGGCTGCCATCTGCTACTTCCGGAGGCTACATTTATATTCAGGGCACAAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274217.4
ENST00000513825.1
CDS-3UTR CAA 90 bp TACACTTCGGGCTGTTCTACAGAGCACTCCAGACCATACGTGGCTGAATACGTGGCATGTCGTTTCAATTaGCTTGTAAAGACATACAGG +
Preference number: 5 (lower is better)
Translates to: YTSGCSTEHSRPYVAEYVACRFN*LVKTYR
Trigger: CCTGTATGTCTTTACAAGCAAATTGAAACGACATGC...CACGTATTCAGCCACGTATGGTCTGGAGTGCTCTGTAGAACAGCCCGAAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CAA 90 bp TTAGAAAGACATTTAAATGTTGGCATCACCCAGGAAGCTCACCTCAAATTTATTCATCCAGGAGTGAACTaGGTCACTTCCTGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: LERHLNVGITQEAHLKFIHPGVN*VTSCGG
Trigger: CCCGCCGCAGGAAGTGACCAAGTTCACTCCTGGATG...AATAAATTTGAGGTGAGCTTCCTGGGTGATGCCAACATTTAAATGTCTTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CAA 90 bp TGGGCCAGGAGTGTCTCAGCCATTTGTGTTTGGCCCAGTAAGTTTGCTGACAAAAACGTTCATGCTTTCTaGGTTACAGTAACACATCAG +
Preference number: 5 (lower is better)
Translates to: WARSVSAICVWPSKFADKNVHAF*VTVTHQ
Trigger: CTGATGTGTTACTGTAACCAAGAAAGCATGAACGTT...TTTGTCAGCAAACTTACTGGGCCAAACACAAATGGCTGAGACACTCCTGGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CAA 90 bp ACCTGCTTTAAAAAGAGGATCTGTGGTGTGTCCTTCTGTATAGTACAAAGAAGACTGCTTCTCCTCACCTaGCCCTGGGGTTCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: TCFKKRICGVSFCIVQRRLLLLT*PWGSFH
Trigger: ATGGAAAGAACCCCAGGGCAAGGTGAGGAGAAGCAG...TCTTCTTTGTACTATACAGAAGGACACACCACAGATCCTCTTTTTAAAGCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CAA 90 bp CAAGTGGAGCCAAAATTTTGGAGCAACAATTCTATAAGTATCAGCCACAGCAGCACACAACATGATGGGTaGACTGAGGTCACAGAGCTA +
Preference number: 5 (lower is better)
Translates to: QVEPKFWSNNSISISHSSTQHDG*TEVTEL
Trigger: TAGCTCTGTGACCTCAGTCAACCCATCATGTTGTGT...GCTGCTGTGGCTGATACTTATAGAATTGTTGCTCCAAAATTTTGGCTCCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CAA 90 bp ACCTGCTTTAAAAAGAGGATCTGTGGTGTGTCCTTCTGTATAGTACAAAGAAGATCACCTGACTCTCCCTaGGGTGGAAATGACTTTGGT +
Preference number: 5 (lower is better)
Translates to: TCFKKRICGVSFCIVQRRSPDSP*GGNDFG
Trigger: ACCAAAGTCATTTCCACCCAAGGGAGAGTCAGGTGA...TCTTCTTTGTACTATACAGAAGGACACACCACAGATCCTCTTTTTAAAGCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CAA 90 bp CTAACCGTTCTTCCATATTTCACATTCCCCTCTGACTCTGACACTCTTCCAATTACACTGAGGTTCCTTTaGAATTTTCTCTGCAGATAT +
Preference number: 5 (lower is better)
Translates to: LTVLPYFTFPSDSDTLPITLRFL*NFLCRY
Trigger: ATATCTGCAGAGAAAATTCAAAAGGAACCTCAGTGT...AATTGGAAGAGTGTCAGAGTCAGAGGGGAATGTGAAATATGGAAGAACGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CAA 90 bp CAAGTGGAGCCAAAATTTTGGAGCAACAATTCTATAAGTATCAGCCACAGCAGCGTTATCTCTCCTTACTaGTCGAACACATTTAATGTG +
Preference number: 5 (lower is better)
Translates to: QVEPKFWSNNSISISHSSVISPY*SNTFNV
Trigger: CACATTAAATGTGTTCGACAAGTAAGGAGAGATAAC...GCTGCTGTGGCTGATACTTATAGAATTGTTGCTCCAAAATTTTGGCTCCACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CAA 90 bp CTAACCGTTCTTCCATATTTCACATTCCCCTCTGACTCTGACACTCTTCCAATTTACTTACTTAACCATTaGCTGACAGATGAGTTAACC +
Preference number: 5 (lower is better)
Translates to: LTVLPYFTFPSDSDTLPIYLLNH*LTDELT
Trigger: GGTTAACTCATCTGTCAGCAAATGGTTAAGTAAGTA...AATTGGAAGAGTGTCAGAGTCAGAGGGGAATGTGAAATATGGAAGAACGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CAA 90 bp TTAGAAAGACATTTAAATGTTGGCATCACCCAGGAAGCTCACCTCAAATTTATTTGGGTGGAAATGACTTaGGTTCAAGACCATGAAGAC +
Preference number: 5 (lower is better)
Translates to: LERHLNVGITQEAHLKFIWVEMT*VQDHED
Trigger: GTCTTCATGGTCTTGAACCAAAGTCATTTCCACCCA...AATAAATTTGAGGTGAGCTTCCTGGGTGATGCCAACATTTAAATGTCTTTCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS-3UTR CAA 90 bp ACCTGCTTTAAAAAGAGGATCTGTGGTGTGTCCTTCTGTATAGTACAAAGAAGATCTCTGGAGTTAAACTaGAACAGTCTGAACACTTTT +
Preference number: 5 (lower is better)
Translates to: TCFKKRICGVSFCIVQRRSLELN*NSLNTF
Trigger: AAAAGTGTTCAGACTGTTCAAGTTTAACTCCAGAGA...TCTTCTTTGTACTATACAGAAGGACACACCACAGATCCTCTTTTTAAAGCAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS CAA 90 bp CGGGAGCGCCAGACCGCTCCCGCTCCCTTGCCCGCGTGGGGCTCCTaGTCGCCGCCATGCCGGCCGCGCTGCGGACGGGCGCTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: RERQTAPAPLPAWGS*SPPCRPRCGRALGL
Trigger: GAGGCCCAGCGCCCGTCCGCAGCGCGGCCGGCATGGCGGCGACAAGGAGCCCCACGCGGGCAAGGGAGCGGGAGCGGTCTGGCGCTCCCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS GCA 72 bp GCGTGGGGCTCCTTGTCGCCGCCATGCCGGCCGCGCTaGGGACGGGCGCTGGGCCTCGGCCCGTGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: AWGSLSPPCRPR*GRALGLGPWSA
Trigger: TGCAGACCACGGGCCGAGGCCCAGCGCCCGTCCGCAGCGCGGCCGGCATGGCGGCGACAAGGAGCCCCACGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS CCA 72 bp CGGCCGCGCTGCGGACGGGCGCTGGGCCTCGGCCCGTaGTCTGCAGTGGTCTGTCAGACGCGACGGCCGCCC +
Preference number: 6 (lower is better)
Translates to: RPRCGRALGLGP*SAVVCQTRRPP
Trigger: GGGCGGCCGTCGCGTCTGACAGACCACTGCAGACCACGGGCCGAGGCCCAGCGCCCGTCCGCAGCGCGGCCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS CCA 72 bp CGGGAGCGCCAGACCGCTCCCGCTCCCTTGCCCGCGTaGGGCTCCTTGTCGCCGCCATGCCGGCCGCGCTGC +
Preference number: 6 (lower is better)
Translates to: RERQTAPAPLPA*GSLSPPCRPRC
Trigger: GCAGCGCGGCCGGCATGGCGGCGACAAGGAGCCCCACGCGGGCAAGGGAGCGGGAGCGGTCTGGCGCTCCCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS GCA 72 bp TCCTGCGGCGGGAGCGCCAGACCGCTCCCGCTCCCTTaGCCGCGTGGGGCTCCTTGTCGCCGCCATGCCGGC +
Preference number: 6 (lower is better)
Translates to: SCGGSARPLPLP*PRGAPCRRHAG
Trigger: GCCGGCATGGCGGCGACAAGGAGCCCCACGCGGGCAAGGGAGCGGGAGCGGTCTGGCGCTCCCGCCGCAGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS CAA 90 bp CTTGGTCACTTCCTGCGGCGGGAGCGCCAGACCGCTCCCGCTCCCTaGCCCGCGTGGGGCTCCTTGTCGCCGCCATGCCGGCCGCGCTGC +
Preference number: 6 (lower is better)
Translates to: LGHFLRRERQTAPAP*PAWGSLSPPCRPRC
Trigger: GCAGCGCGGCCGGCATGGCGGCGACAAGGAGCCCCACGCGGGCAAGGGAGCGGGAGCGGTCTGGCGCTCCCGCCGCAGGAAGTGACCAAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS CAA 72 bp TTCCTGCGGCGGGAGCGCCAGACCGCTCCCGCTCCCTaGCCCGCGTGGGGCTCCTTGTCGCCGCCATGCCGG +
Preference number: 6 (lower is better)
Translates to: FLRRERQTAPAP*PAWGSLSPPCR
Trigger: CCGGCATGGCGGCGACAAGGAGCCCCACGCGGGCAAGGGAGCGGGAGCGGTCTGGCGCTCCCGCCGCAGGAA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS TCA 72 bp CGTTCTCGGTCAGCAGGGAGATCTCCGGCCAGTCCCTaGGAGGCTCCTCTGGGTAGCAGACTTCAAAGTCTC +
Preference number: 6 (lower is better)
Translates to: RSRSAGRSPASP*EAPLGSRLQSL
Trigger: GAGACTTTGAAGTCTGCTACCCAGAGGAGCCTCTCAGGGACTGGCCGGAGATCTCCCTGCTGACCGAGAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS CCA 72 bp AGCACTGCTGTTCGGCCCCCAGCGGACTTAAAAGACTaGAATGTGGTAGTGGCGGTCGTTCTCGGTCAGCAG +
Preference number: 6 (lower is better)
Translates to: STAVRPPADLKD*NVVVAVVLGQQ
Trigger: CTGCTGACCGAGAACGACCGCCACTACCACATTCCAGTCTTTTAAGTCCGCTGGGGGCCGAACAGCAGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS CCA 72 bp CAGGGAGATCTCCGGCCAGTCCCTGAGAGGCTCCTCTaGGTAGCAGACTTCAAAGTCTCTGGAGTTAAACTT +
Preference number: 6 (lower is better)
Translates to: QGDLRPVPERLL*VADFKVSGVKL
Trigger: AAGTTTAACTCCAGAGACTTTGAAGTCTGCTACCCAGAGGAGCCTCTCAGGGACTGGCCGGAGATCTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS GCA 72 bp TTTATTGCAACTGTGACCACCGTCACTGGTGAGCACTaGTGTTCGGCCCCCAGCGGACTTAAAAGACTGGAA +
Preference number: 6 (lower is better)
Translates to: FIATVTTVTGEH*CSAPSGLKRLE
Trigger: TTCCAGTCTTTTAAGTCCGCTGGGGGCCGAACAGCAGTGCTCACCAGTGACGGTGGTCACAGTTGCAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS CCA 72 bp GCCCTGAATATAAATGTAGCCTCCGGAAGTAGCAGATaGCAGCCACCAGAAATGAAACTGCCAACATCACAA +
Preference number: 6 (lower is better)
Translates to: ALNINVASGSSR*QPPEMKLPTSQ
Trigger: TTGTGATGTTGGCAGTTTCATTTCTGGTGGCTGCCATCTGCTACTTCCGGAGGCTACATTTATATTCAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274217.4
ENST00000513825.1
CDS CAA 72 bp CCACCAGAAATGAAACTGCCAACATCACAAAGCCTTTaGCCATTCTCCAGACAGTGTCTAAGGCTTGGCTTG +
Preference number: 6 (lower is better)
Translates to: PPEMKLPTSQSL*PFSRQCLRLGL
Trigger: CAAGCCAAGCCTTAGACACTGTCTGGAGAATGGCAAAAGGCTTTGTGATGTTGGCAGTTTCATTTCTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274217.4
ENST00000513825.1
CDS TCA 72 bp CACATGTGTCGCCTACAGAATTCAGGTGATTCATCATaGAGCTCAAAGGATCAGAGGATGTCTCCCTGGAAA +
Preference number: 6 (lower is better)
Translates to: HMCRLQNSGDSS*SSKDQRMSPWK
Trigger: TTTCCAGGGAGACATCCTCTGATCCTTTGAGCTTCATGATGAATCACCTGAATTCTGTAGGCGACACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS TCA 72 bp TGCTCTAGTCCACATGTGTCGCCTACAGAATTCAGGTaGTTCATCATGAAGCTCAAAGGATCAGAGGATGTC +
Preference number: 6 (lower is better)
Translates to: CSSPHVSPTEFR*FIMKLKGSEDV
Trigger: GACATCCTCTGATCCTTTGAGCTTCATGATGAATCACCTGAATTCTGTAGGCGACACATGTGGACTAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS GCA 72 bp TCTGCCTCCACACTGAGGTTCCTTTTGAATTTTCTCTaGAGATATCCAATCCACCATTTCAGCTTGTGCCCT +
Preference number: 6 (lower is better)
Translates to: SASTLRFLLNFL*RYPIHHFSLCP
Trigger: AGGGCACAAGCTGAAATGGTGGATTGGATATCTGCAGAGAAAATTCAAAAGGAACCTCAGTGTGGAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4
CDS TCA 72 bp GAGCCTGTATACTTCTCAGGACCAAAACTGTACTGCTaGATCCAATTACAACCTTGTGAAAACAGCAGTTTT +
Preference number: 6 (lower is better)
Translates to: EPVYFSGPKLYC*IQLQPCENSSF
Trigger: AAAACTGCTGTTTTCACAAGGTTGTAATTGGATTCAGCAGTACAGTTTTGGTCCTGAGAAGTATACAGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274217.4