Pregenerated sensors for OTULIN-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000261360Ensembl transcript IDs: ENST00000563101.1, ENST00000564167.1, ENST00000567048.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCCGGGCAGGACGCAGCCGCGCTTCACAGCTGAGGAAAACCCGCTaGGGCGTAGGGCAACGCTCAGAAGCCGAGAGTGGCACCGCGACG | + |
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Preference number: 5 (lower is better) Translates to: ARAGRSRASQLRKTR*GVGQRSEAESGTAT Trigger: CGTCGCGGTGCCACTCTCGGCTTCTGAGCGTTGCCCTACGCCGCAGCGGGTTTTCCTCAGCTGTGAAGCGCGGCTGCGTCCTGCCCGGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563101.1 |
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| CDS GCA 90 bp | CCATTCCATCCCGCCCTATTCCGGGGCTGCACTCTGCTTCAGCGCTaGTTCTTGCACCCACGACTGCAACTCAACCGCAGAGGCTACTCC | + |
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Preference number: 5 (lower is better) Translates to: PFHPALFRGCTLLQR*FLHPRLQLNRRGYS Trigger: GGAGTAGCCTCTGCGGTTGAGTTGCAGTCGTGGGTGCAAGAAGCAGCGCTGAAGCAGAGTGCAGCCCCGGAATAGGGCGGGATGGAATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000563101.1 ENST00000564167.1 ENST00000567048.1 |
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| CDS GCA 90 bp | AACTGCCCAGGCCATTCCATCCCGCCCTATTCCGGGGCTGCACTCTaGTTCAGCGCTGCTTCTTGCACCCACGACTGCAACTCAACCGCA | + |
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Preference number: 5 (lower is better) Translates to: NCPGHSIPPYSGAAL*FSAASCTHDCNSTA Trigger: TGCGGTTGAGTTGCAGTCGTGGGTGCAAGAAGCAGCGCTGAAGCAGAGTGCAGCCCCGGAATAGGGCGGGATGGAATGGCCTGGGCAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000563101.1 ENST00000564167.1 ENST00000567048.1 |
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| CDS GCA 90 bp | ATCCCGCCCTATTCCGGGGCTGCACTCTGCTTCAGCGCTGCTTCTTaGACCCACGACTGCAACTCAACCGCAGAGGCTACTCCTCTACTC | + |
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Preference number: 5 (lower is better) Translates to: IPPYSGAALCFSAAS*THDCNSTAEATPLL Trigger: GAGTAGAGGAGTAGCCTCTGCGGTTGAGTTGCAGTCGTGGGTGCAAGAAGCAGCGCTGAAGCAGAGTGCAGCCCCGGAATAGGGCGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000563101.1 ENST00000564167.1 ENST00000567048.1 |
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| CDS GCA 90 bp | GTTTCTGAACTGCCCAGGCCATTCCATCCCGCCCTATTCCGGGGCTaGACTCTGCTTCAGCGCTGCTTCTTGCACCCACGACTGCAACTC | + |
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Preference number: 5 (lower is better) Translates to: VSELPRPFHPALFRG*TLLQRCFLHPRLQL Trigger: GAGTTGCAGTCGTGGGTGCAAGAAGCAGCGCTGAAGCAGAGTGCAGCCCCGGAATAGGGCGGGATGGAATGGCCTGGGCAGTTCAGAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000563101.1 ENST00000564167.1 ENST00000567048.1 |
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| CDS TCA 90 bp | CTGCAACTCAACCGCAGAGGCTACTCCTCTACTCCATCCCAGAGATaGAGCATTTCGCCTTTGGATGCCAGGACGCTCCCCGCCGCTCGT | + |
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Preference number: 5 (lower is better) Translates to: LQLNRRGYSSTPSQR*SISPLDARTLPAAR Trigger: ACGAGCGGCGGGGAGCGTCCTGGCATCCAAAGGCGAAATGCTTCATCTCTGGGATGGAGTAGAGGAGTAGCCTCTGCGGTTGAGTTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567048.1 |
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| CDS GCA 90 bp | TCCGGGGCTGCACTCTGCTTCAGCGCTGCTTCTTGCACCCACGACTaGAACTCAACCGCAGAGGCTACTCCTCTACTCCATCCCAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: SGAALCFSAASCTHD*NSTAEATPLLHPRD Trigger: ATCTCTGGGATGGAGTAGAGGAGTAGCCTCTGCGGTTGAGTTGCAGTCGTGGGTGCAAGAAGCAGCGCTGAAGCAGAGTGCAGCCCCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000563101.1 ENST00000564167.1 ENST00000567048.1 |
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| CDS CCA 90 bp | TCCCTGCTTCTATCTCCAAATGGCCTTCTTCCCTCTGTTCCGCCCTaGACTCCTCGCGGGTTTCTGAACTGCCCAGGCCATTCCATCCCG | + |
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Preference number: 5 (lower is better) Translates to: SLLLSPNGLLPSVPP*TPRGFLNCPGHSIP Trigger: CGGGATGGAATGGCCTGGGCAGTTCAGAAACCCGCGAGGAGTCCAGGGCGGAACAGAGGGAAGAAGGCCATTTGGAGATAGAAGCAGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567048.1 |
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| CDS TCA 90 bp | GACTCCTTCCTCAAGAGGATCCAGCCTCTCCTTCATTCAGAGTTCTaGGAGTGTAAACCGGCCCAAGTCTGGGAATTGATTGAGAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: DSFLKRIQPLLHSEF*ECKPAQVWELIERL Trigger: CAACCTCTCAATCAATTCCCAGACTTGGGCCGGTTTACACTCTCAGAACTCTGAATGAAGGAGAGGCTGGATCCTCTTGAGGAAGGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563101.1 |
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| CDS GCA 90 bp | CGGAAGGCACTTTGGAATAATCCTTCTTTGCCTTTTCTTAGCTTCTaGTGGCTCCTGGCATTCTGCGGCGTTTCTTGGCTTCCAGTTGCA | + |
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Preference number: 5 (lower is better) Translates to: RKALWNNPSLPFLSF*WLLAFCGVSWLPVA Trigger: TGCAACTGGAAGCCAAGAAACGCCGCAGAATGCCAGGAGCCAGCAGAAGCTAAGAAAAGGCAAAGAAGGATTATTCCAAAGTGCCTTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000563101.1 ENST00000564167.1 ENST00000567048.1 |
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| CDS CCA 90 bp | CCTTTTCTTAGCTTCTGCTGGCTCCTGGCATTCTGCGGCGTTTCTTaGCTTCCAGTTGCATCACTCCAATCCCTGCTTCTATCTCCAAAT | + |
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Preference number: 5 (lower is better) Translates to: PFLSFCWLLAFCGVS*LPVASLQSLLLSPN Trigger: ATTTGGAGATAGAAGCAGGGATTGGAGTGATGCAACTGGAAGCCAAGAAACGCCGCAGAATGCCAGGAGCCAGCAGAAGCTAAGAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000563101.1 ENST00000564167.1 ENST00000567048.1 |
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| CDS GCA 90 bp | CATTCTGCGGCGTTTCTTGGCTTCCAGTTGCATCACTCCAATCCCTaGTTCTATCTCCAAATGGCCTTCTTCCCTCTGTGCACATTTATC | + |
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Preference number: 5 (lower is better) Translates to: HSAAFLGFQLHHSNP*FYLQMAFFPLCTFI Trigger: GATAAATGTGCACAGAGGGAAGAAGGCCATTTGGAGATAGAAGCAGGGATTGGAGTGATGCAACTGGAAGCCAAGAAACGCCGCAGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563101.1 ENST00000564167.1 |
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| CDS CCA 90 bp | CCGTGCCCGGCCAAGTATATCTCTTTTAATTATGCATTCTGGAACTaGGGAAATAGCACAGGATGGGTCCAGGGACTCAACGGGTCTAAT | + |
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Preference number: 5 (lower is better) Translates to: PCPAKYISFNYAFWN*GNSTGWVQGLNGSN Trigger: ATTAGACCCGTTGAGTCCCTGGACCCATCCTGTGCTATTTCCCCAGTTCCAGAATGCATAATTAAAAGAGATATACTTGGCCGGGCACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563101.1 |
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| CDS CCA 90 bp | AAGGCACTTTGGAATAATCCTTCTTTGCCTTTTCTTAGCTTCTGCTaGCTCCTGGCATTCTGCGGCGTTTCTTGGCTTCCAGTTGCATCA | + |
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Preference number: 5 (lower is better) Translates to: KALWNNPSLPFLSFC*LLAFCGVSWLPVAS Trigger: TGATGCAACTGGAAGCCAAGAAACGCCGCAGAATGCCAGGAGCCAGCAGAAGCTAAGAAAAGGCAAAGAAGGATTATTCCAAAGTGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000563101.1 ENST00000564167.1 ENST00000567048.1 |
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| CDS CCA 90 bp | GGCAGTTCTGTCGCTTCAACTTCATTTAGCATAGGCCCTTCTGGGTaGATGGAGGTTAAACTATCAATGGAGTTTTCACTCAGATCCTTC | + |
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Preference number: 5 (lower is better) Translates to: GSSVASTSFSIGPSG*MEVKLSMEFSLRSF Trigger: GAAGGATCTGAGTGAAAACTCCATTGATAGTTTAACCTCCATCCACCCAGAAGGGCCTATGCTAAATGAAGTTGAAGCGACAGAACTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563101.1 |
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| CDS TCA 90 bp | CATATCAATAAATTTGGCCTGACGGAATTTATAACCTTTCCACCTTaGTCCCTATATGAGTTTCCTGGGGTGGTCATGACAAAGGACCAC | + |
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Preference number: 5 (lower is better) Translates to: HINKFGLTEFITFPP*SLYEFPGVVMTKDH Trigger: GTGGTCCTTTGTCATGACCACCCCAGGAAACTCATATAGGGATCAAGGTGGAAAGGTTATAAATTCCGTCAGGCCAAATTTATTGATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563101.1 |
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| CDS GCA 90 bp | GGAGGTCACTACTATTTAGTCTCCCTAAGCTGGTCTTCCAAGTCCTaGCCTTCTCCAAACTTTTACCAAACTGAAGACAAAGTGATTTTT | + |
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Preference number: 5 (lower is better) Translates to: GGHYYLVSLSWSSKS*PSPNFYQTEDKVIF Trigger: AAAAATCACTTTGTCTTCAGTTTGGTAAAAGTTTGGAGAAGGGCAGGACTTGGAAGACCAGCTTAGGGAGACTAAATAGTAGTGACCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563101.1 |
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| CDS TCA 90 bp | CTAAGGGCGCCAACCATTCGATTTAGGGCTCATTCTATACCAGTATaGCCTCATCTTAACCAATTACATCTGCAAAAACCCTATTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: LRAPTIRFRAHSIPV*PHLNQLHLQKPYFQ Trigger: TTGGAAATAGGGTTTTTGCAGATGTAATTGGTTAAGATGAGGTCATACTGGTATAGAATGAGCCCTAAATCGAATGGTTGGCGCCCTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000563101.1 |
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| CDS CCA 90 bp | TTAAGCATAAGCGCCACAGTTAGCCTAATATGGCTTTTCATGATCTaGTCTCCACTACCCCTCTTTCAGTTTCATCTTTCAATACAATCC | + |
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Preference number: 5 (lower is better) Translates to: LSISATVSLIWLFMI*SPLPLFQFHLSIQS Trigger: GGATTGTATTGAAAGATGAAACTGAAAGAGGGGTAGTGGAGACCAGATCATGAAAAGCCATATTAGGCTAACTGTGGCGCTTATGCTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563101.1 |
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| CDS GCA 72 bp | GGACGCAGCCGCGCTTCACAGCTGAGGAAAACCCGCTaGGGCGTAGGGCAACGCTCAGAAGCCGAGAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GRSRASQLRKTR*GVGQRSEAESG Trigger: GCCACTCTCGGCTTCTGAGCGTTGCCCTACGCCGCAGCGGGTTTTCCTCAGCTGTGAAGCGCGGCTGCGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563101.1 |
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| CDS TCA 72 bp | CCCCTTCTGTTCCGCCCTGGACTCCTCGCGGGTTTCTaGACTGCCCAGGCCATTCCATCCCGCCCTATTCCG | + |
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Preference number: 6 (lower is better) Translates to: PLLFRPGLLAGF*TAQAIPSRPIP Trigger: CGGAATAGGGCGGGATGGAATGGCCTGGGCAGTTCAGAAACCCGCGAGGAGTCCAGGGCGGAACAGAAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564167.1 |
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| CDS GCA 72 bp | CTGCCCAGGCCATTCCATCCCGCCCTATTCCGGGGCTaGACTCTGCTTCAGCGCTGCTTCTTGCACCCACGA | + |
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Preference number: 6 (lower is better) Translates to: LPRPFHPALFRG*TLLQRCFLHPR Trigger: TCGTGGGTGCAAGAAGCAGCGCTGAAGCAGAGTGCAGCCCCGGAATAGGGCGGGATGGAATGGCCTGGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000563101.1 ENST00000564167.1 ENST00000567048.1 |
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| CDS GCA 72 bp | CCCGCCCTATTCCGGGGCTGCACTCTGCTTCAGCGCTaGTTCTTGCACCCACGACTGCAACTCAACCGCAGA | + |
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Preference number: 6 (lower is better) Translates to: PALFRGCTLLQR*FLHPRLQLNRR Trigger: TCTGCGGTTGAGTTGCAGTCGTGGGTGCAAGAAGCAGCGCTGAAGCAGAGTGCAGCCCCGGAATAGGGCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000563101.1 ENST00000564167.1 ENST00000567048.1 |
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| CDS GCA 72 bp | GGCCATTCCATCCCGCCCTATTCCGGGGCTGCACTCTaGTTCAGCGCTGCTTCTTGCACCCACGACTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: GHSIPPYSGAAL*FSAASCTHDCN Trigger: GTTGCAGTCGTGGGTGCAAGAAGCAGCGCTGAAGCAGAGTGCAGCCCCGGAATAGGGCGGGATGGAATGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000563101.1 ENST00000564167.1 ENST00000567048.1 |
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| CDS CAA 90 bp | CATCCCGCCCTATTCCGGGGCTGCACTCTGCTTCAGCGCTGCTTCTaGCACCCACGACTGCAACTCAACCGCAGAGGCTACTCCTCTACT | + |
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Preference number: 6 (lower is better) Translates to: HPALFRGCTLLQRCF*HPRLQLNRRGYSST Trigger: AGTAGAGGAGTAGCCTCTGCGGTTGAGTTGCAGTCGTGGGTGCAAGAAGCAGCGCTGAAGCAGAGTGCAGCCCCGGAATAGGGCGGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000563101.1 ENST00000564167.1 ENST00000567048.1 |
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| CDS CAA 72 bp | CTATTCCGGGGCTGCACTCTGCTTCAGCGCTGCTTCTaGCACCCACGACTGCAACTCAACCGCAGAGGCTAC | + |
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Preference number: 6 (lower is better) Translates to: LFRGCTLLQRCF*HPRLQLNRRGY Trigger: GTAGCCTCTGCGGTTGAGTTGCAGTCGTGGGTGCAAGAAGCAGCGCTGAAGCAGAGTGCAGCCCCGGAATAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000563101.1 ENST00000564167.1 ENST00000567048.1 |
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| CDS TCA 72 bp | AACACACACTGCTGCGCTTGCTTAACCGGGTCGAGTTaGACTAGTTCGTCTTCTCCGCCCCAACCCCGGTGC | + |
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Preference number: 6 (lower is better) Translates to: NTHCCACLTGSS*TSSSSPPQPRC Trigger: GCACCGGGGTTGGGGCGGAGAAGACGAACTAGTTCAACTCGACCCGGTTAAGCAAGCGCAGCAGTGTGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000563101.1 ENST00000564167.1 |
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| CDS GCA 72 bp | TATTCCGGGGCTGCACTCTGCTTCAGCGCTGCTTCTTaGACCCACGACTGCAACTCAACCGCAGAGGCTACT | + |
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Preference number: 6 (lower is better) Translates to: YSGAALCFSAAS*THDCNSTAEAT Trigger: AGTAGCCTCTGCGGTTGAGTTGCAGTCGTGGGTGCAAGAAGCAGCGCTGAAGCAGAGTGCAGCCCCGGAATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000563101.1 ENST00000564167.1 ENST00000567048.1 |
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| CDS CCA 72 bp | CTATCTCCAAATGGCCTTCTTCCCTCTGTTCCGCCCTaGACTCCTCGCGGGTTTCTGAACTGCCCAGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LSPNGLLPSVPP*TPRGFLNCPGH Trigger: ATGGCCTGGGCAGTTCAGAAACCCGCGAGGAGTCCAGGGCGGAACAGAGGGAAGAAGGCCATTTGGAGATAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567048.1 |
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| CDS GCA 72 bp | GCACTCTGCTTCAGCGCTGCTTCTTGCACCCACGACTaGAACTCAACCGCAGAGGCTACTCCTCTACTCCAT | + |
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Preference number: 6 (lower is better) Translates to: ALCFSAASCTHD*NSTAEATPLLH Trigger: ATGGAGTAGAGGAGTAGCCTCTGCGGTTGAGTTGCAGTCGTGGGTGCAAGAAGCAGCGCTGAAGCAGAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000563101.1 ENST00000564167.1 ENST00000567048.1 |
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| CDS CCA 72 bp | TGCACATTTATCTATGTGTCCCCTTCTGTTCCGCCCTaGACTCCTCGCGGGTTTCTGAACTGCCCAGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: CTFIYVSPSVPP*TPRGFLNCPGH Trigger: ATGGCCTGGGCAGTTCAGAAACCCGCGAGGAGTCCAGGGCGGAACAGAAGGGGACACATAGATAAATGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564167.1 |
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| CDS CCA 72 bp | AGCTTCTGCTGGCTCCTGGCATTCTGCGGCGTTTCTTaGCTTCCAGTTGCATCACTCCAATCCCTGCTTCTA | + |
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Preference number: 6 (lower is better) Translates to: SFCWLLAFCGVS*LPVASLQSLLL Trigger: TAGAAGCAGGGATTGGAGTGATGCAACTGGAAGCCAAGAAACGCCGCAGAATGCCAGGAGCCAGCAGAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000563101.1 ENST00000564167.1 ENST00000567048.1 |
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| CDS GCA 72 bp | GCTCCTGGCATTCTGCGGCGTTTCTTGGCTTCCAGTTaGATCACTCCAATCCCTGCTTCTATCTCCAAATGG | + |
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Preference number: 6 (lower is better) Translates to: APGILRRFLASS*ITPIPASISKW Trigger: CCATTTGGAGATAGAAGCAGGGATTGGAGTGATGCAACTGGAAGCCAAGAAACGCCGCAGAATGCCAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000563101.1 ENST00000564167.1 ENST00000567048.1 |
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| CDS GCA 72 bp | GCGTTTCTTGGCTTCCAGTTGCATCACTCCAATCCCTaGTTCTATCTCCAAATGGCCTTCTTCCCTCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: AFLGFQLHHSNP*FYLQMAFFPLC Trigger: GCACAGAGGGAAGAAGGCCATTTGGAGATAGAAGCAGGGATTGGAGTGATGCAACTGGAAGCCAAGAAACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563101.1 ENST00000564167.1 |
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| CDS GCA 72 bp | TTGCCTTTTCTTAGCTTCTGCTGGCTCCTGGCATTCTaGGGCGTTTCTTGGCTTCCAGTTGCATCACTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LPFLSFCWLLAF*GVSWLPVASLQ Trigger: TTGGAGTGATGCAACTGGAAGCCAAGAAACGCCGCAGAATGCCAGGAGCCAGCAGAAGCTAAGAAAAGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000563101.1 ENST00000564167.1 ENST00000567048.1 |
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| CDS CCA 72 bp | CTATCAATGGAGTTTTCACTCAGATCCTTCTCACGGTaGGCTCAGTGGGTCCCCAAACCCATCCTGTGGTTA | + |
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Preference number: 6 (lower is better) Translates to: LSMEFSLRSFSR*AQWVPKPILWL Trigger: TAACCACAGGATGGGTTTGGGGACCCACTGAGCCCACCGTGAGAAGGATCTGAGTGAAAACTCCATTGATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563101.1 |
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| CDS GCA 72 bp | GCGTTTCTTGGCTTCCAGTTGCATCACTCCAATCCCTaGTTCTATCTCCAAATGGCCTTCTTCCCTCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: AFLGFQLHHSNP*FYLQMAFFPLF Trigger: GAACAGAGGGAAGAAGGCCATTTGGAGATAGAAGCAGGGATTGGAGTGATGCAACTGGAAGCCAAGAAACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567048.1 |
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| CDS GCA 72 bp | ACCTTCTTCGGAAGGCACTTTGGAATAATCCTTCTTTaGCTTTTCTTAGCTTCTGCTGGCTCCTGGCATTCT | + |
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Preference number: 6 (lower is better) Translates to: TFFGRHFGIILL*LFLASAGSWHS Trigger: AGAATGCCAGGAGCCAGCAGAAGCTAAGAAAAGGCAAAGAAGGATTATTCCAAAGTGCCTTCCGAAGAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000563101.1 ENST00000564167.1 ENST00000567048.1 |
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| CDS CCA 72 bp | GTTTTTGGCAGGGCCAACCTTCTTCGGAAGGCACTTTaGAATAATCCTTCTTTGCCTTTTCTTAGCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: VFGRANLLRKAL*NNPSLPFLSFC Trigger: GCAGAAGCTAAGAAAAGGCAAAGAAGGATTATTCCAAAGTGCCTTCCGAAGAAGGTTGGCCCTGCCAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000563101.1 ENST00000564167.1 ENST00000567048.1 |
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| CDS TCA 72 bp | AGTTCTGAGAGTGTAAACCGGCCCAAGTCTGGGAATTaGTTGAGAGGTTGTGACTATTTTGGTGATGCAAGT | + |
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Preference number: 6 (lower is better) Translates to: SSESVNRPKSGN*LRGCDYFGDAS Trigger: ACTTGCATCACCAAAATAGTCACAACCTCTCAATCAATTCCCAGACTTGGGCCGGTTTACACTCTCAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563101.1 |
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| CDS CCA 72 bp | AGCGCCACAGTTAGCCTAATATGGCTTTTCATGATCTaGTCTCCACTACCCCTCTTTCAGTTTCATCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SATVSLIWLFMI*SPLPLFQFHLS Trigger: TGAAAGATGAAACTGAAAGAGGGGTAGTGGAGACCAGATCATGAAAAGCCATATTAGGCTAACTGTGGCGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563101.1 |
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| CDS CCA 72 bp | GTCGCTTCAACTTCATTTAGCATAGGCCCTTCTGGGTaGATGGAGGTTAAACTATCAATGGAGTTTTCACTC | + |
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Preference number: 6 (lower is better) Translates to: VASTSFSIGPSG*MEVKLSMEFSL Trigger: GAGTGAAAACTCCATTGATAGTTTAACCTCCATCCACCCAGAAGGGCCTATGCTAAATGAAGTTGAAGCGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563101.1 |
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| CDS CCA 72 bp | GCCAAGTATATCTCTTTTAATTATGCATTCTGGAACTaGGGAAATAGCACAGGATGGGTCCAGGGACTCAAC | + |
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Preference number: 6 (lower is better) Translates to: AKYISFNYAFWN*GNSTGWVQGLN Trigger: GTTGAGTCCCTGGACCCATCCTGTGCTATTTCCCCAGTTCCAGAATGCATAATTAAAAGAGATATACTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563101.1 |
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| CDS TCA 72 bp | AAATTTGGCCTGACGGAATTTATAACCTTTCCACCTTaGTCCCTATATGAGTTTCCTGGGGTGGTCATGACA | + |
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Preference number: 6 (lower is better) Translates to: KFGLTEFITFPP*SLYEFPGVVMT Trigger: TGTCATGACCACCCCAGGAAACTCATATAGGGATCAAGGTGGAAAGGTTATAAATTCCGTCAGGCCAAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563101.1 |
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| CDS CCA 72 bp | ATTGGTCTCTTCGGGGGAAATAACAATATACATTTTTaGCAATGTAGCAGACTCCTTCCTCAAGAGGATCCA | + |
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Preference number: 6 (lower is better) Translates to: IGLFGGNNNIHF*QCSRLLPQEDP Trigger: TGGATCCTCTTGAGGAAGGAGTCTGCTACATTGCCAAAAATGTATATTGTTATTTCCCCCGAAGAGACCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000563101.1 |
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| CDS TCA 72 bp | CCAACCATTCGATTTAGGGCTCATTCTATACCAGTATaGCCTCATCTTAACCAATTACATCTGCAAAAACCC | + |
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Preference number: 6 (lower is better) Translates to: PTIRFRAHSIPV*PHLNQLHLQKP Trigger: GGGTTTTTGCAGATGTAATTGGTTAAGATGAGGTCATACTGGTATAGAATGAGCCCTAAATCGAATGGTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000563101.1 |
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| CDS TCA 72 bp | AAAGTGATTTTTCAAAATGATCTCAAGATCTGTCAATaGGGATTAAGCATAAGCGCCACAGTTAGCCTAATA | + |
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Preference number: 6 (lower is better) Translates to: KVIFQNDLKICQ*GLSISATVSLI Trigger: TATTAGGCTAACTGTGGCGCTTATGCTTAATCCTCATTGACAGATCTTGAGATCATTTTGAAAAATCACTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000563101.1 |
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