RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OTUD6B (Homo sapiens)

Ensembl gene IDs: ENSG00000155100

Ensembl transcript IDs: ENST00000285420.8, ENST00000404789.8, ENST00000522894.5, ENST00000524027.5, ENST00000615618.1, ENST00000617869.4

Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AATGGCAGAAAGTCTTCCACATGGCTTTGCATATACTCAGCGGTCTaGCTTCTCAAGGCAACCACAGTCAGAGCACAATCCTTTTCTTTC +
Preference number: 1 (lower is better)
Translates to: NGRKSSTWLCIYSAV*LLKATTVRAQSFSF
Trigger: GAAAGAAAAGGATTGTGCTCTGACTGTGGTTGCCTTGAGAAGTCAGACCGCTGAGTATATGCAAAGCCATGTGGAAGACTTTCTGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522894.5
3UTR CCA 90 bp AATATAATTTGTTTGGCAGGCAGAATGGCTTGTAATCTTTTGAACTaGAAAGCCTTCAGGAAGTACTTACTTGCTATCAATGACCCTGCC +
Preference number: 1 (lower is better)
Translates to: NIICLAGRMACNLLN*KAFRKYLLAINDPA
Trigger: GGCAGGGTCATTGATAGCAAGTAAGTACTTCCTGAAGGCTTTCCAGTTCAAAAGATTACAAGCCATTCTGCCTGCCAAACAAATTATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
3UTR-3UTR CCA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTAATAGGGGACCATCTTaGTCTATGAATGGTGTTCTC +
Preference number: 2 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPNRGPS*SMNGVL
Trigger: GAGAACACCATTCATAGACCAAGATGGTCCCCTATT...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
3UTR-3UTR TCA 90 bp TCTTCTGGAGTATACATATCTCCTGTATTAGGGTTTGTTAAAAATGGCAGAAAGATATACTCAGCGGTCTaGCTTCTCAAGGCAACCACA +
Preference number: 2 (lower is better)
Translates to: SSGVYISPVLGFVKNGRKIYSAV*LLKATT
Trigger: TGTGGTTGCCTTGAGAAGTCAGACCGCTGAGTATAT...CTTTCTGCCATTTTTAACAAACCCTAATACAGGAGATATGTATACTCCAGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522894.5
3UTR-3UTR CCA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTAATAGGGGACCATCTTaGTCTATGAATGGTGTTCTC +
Preference number: 2 (lower is better)
Translates to: KLHCISLIDTMVTAIKFINRGPS*SMNGVL
Trigger: GAGAACACCATTCATAGACCAAGATGGTCCCCTATT...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
3UTR CAA 90 bp TCACATCAAGGGTTACAAAACAGGCATCTTCAGAATATAATTTGTTaGGCAGGCAGAATGGCTTGTAATCTTTTGAACTGGAAAGCCTTC +
Preference number: 2 (lower is better)
Translates to: SHQGLQNRHLQNIIC*AGRMACNLLNWKAF
Trigger: GAAGGCTTTCCAGTTCAAAAGATTACAAGCCATTCTGCCTGCCAAACAAATTATATTCTGAAGATGCCTGTTTTGTAACCCTTGATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
3UTR-3UTR TCA 90 bp ACTATAATGGGAGGAGAATCTGCCTGTATTATCTCTATTGGTGTTTGTAAAATGCTCATTTTCCTCTTCTaGGGAAACAGCACGCAGAAA +
Preference number: 2 (lower is better)
Translates to: TIMGGESACIISIGVCKMLIFLF*GNSTQK
Trigger: TTTCTGCGTGCTGTTTCCTCAGAAGAGGAAAATGAG...CATTTTACAAACACCAATAGAGATAATACAGGCAGATTCTCCTCCCATTATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522894.5
3UTR-3UTR GCA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTGCAAGCTTCTTAGCTTaGTTTGATAAGGCTATATAT +
Preference number: 2 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPASFLA*FDKAIY
Trigger: ATATATAGCCTTATCAAAGCAAGCTAAGAAGCTTGC...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
3UTR-3UTR TCA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATGACCATCTTGGTCTATaGATGGTGTTCTCTACAATG +
Preference number: 2 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYDHLGL*MVFSTM
Trigger: CATTGTAGAGAACACCATTCATAGACCAAGATGGTC...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
3UTR-3UTR CCA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTCCACTAAGAAGACACTaGTTAAAGTTTATCTCTGAC +
Preference number: 2 (lower is better)
Translates to: KLHCISLIDTMVTAIKFIPLRRH*LKFISD
Trigger: GTCAGAGATAAACTTTAACCAGTGTCTTCTTAGTGG...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
3UTR-3UTR CCA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACCACTAAGAAGACACTaGTTAAAGTTTATCTCTGAC +
Preference number: 2 (lower is better)
Translates to: ISANRGPSWSMNGVLYNEPLRRH*LKFISD
Trigger: GTCAGAGATAAACTTTAACCAGTGTCTTCTTAGTGG...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
3UTR-3UTR CCA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATAAATAGGGGACCATCTTaGTCTATGAATGGTGTTCTC +
Preference number: 2 (lower is better)
Translates to: RKNTVVSNLKSELEQPFINRGPS*SMNGVL
Trigger: GAGAACACCATTCATAGACCAAGATGGTCCCCTATT...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
3UTR-3UTR CCA 90 bp GAGGAGAATCTGCCTGTATTATCTCTATTGGTGTTTGTAAAATGTGAGACAGAGCACTTTCCATATGTCTaGCTCCTGTTAAGTTTTCAA +
Preference number: 2 (lower is better)
Translates to: EENLPVLSLLVFVKCETEHFPYV*LLLSFQ
Trigger: TTGAAAACTTAACAGGAGCCAGACATATGGAAAGTG...CTCTGTCTCACATTTTACAAACACCAATAGAGATAATACAGGCAGATTCTCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522894.5
3UTR-3UTR TCA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATATCAAATCCTAGAGAATaGGGCAAGAAGGGAAATATC +
Preference number: 2 (lower is better)
Translates to: RKNTVVSNLKSELEQPFISNPRE*GKKGNI
Trigger: GATATTTCCCTTCTTGCCTCATTCTCTAGGATTTGA...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
3UTR-3UTR GCA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATAGTAAAGGCCACAAAATaGTTGTTCCTTCAAGGAAAG +
Preference number: 2 (lower is better)
Translates to: RKNTVVSNLKSELEQPFIVKATK*LFLQGK
Trigger: CTTTCCTTGAAGGAACAAGCATTTTGTGGCCTTTAC...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
3UTR-3UTR CCA 90 bp TTATCTCTATTGGTGTTTGTAAAATGTGAGACAGAGCTCTTAGCTCAAGCTGACCTTCTGAAATTCTTCTaGAGTATACATATCTCCTGT +
Preference number: 2 (lower is better)
Translates to: LSLLVFVKCETELLAQADLLKFF*SIHISC
Trigger: ACAGGAGATATGTATACTCCAGAAGAATTTCAGAAG...GTCAGCTTGAGCTAAGAGCTCTGTCTCACATTTTACAAACACCAATAGAGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522894.5
3UTR-3UTR GCA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATAGCAAGCTTCTTAGCTTaGTTTGATAAGGCTATATAT +
Preference number: 2 (lower is better)
Translates to: RKNTVVSNLKSELEQPFIASFLA*FDKAIY
Trigger: ATATATAGCCTTATCAAAGCAAGCTAAGAAGCTTGC...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
3UTR TCA 72 bp AAGTCTTCCACATGGCTTTGCATATACTCAGCGGTCTaGCTTCTCAAGGCAACCACAGTCAGAGCACAATCC +
Preference number: 3 (lower is better)
Translates to: KSSTWLCIYSAV*LLKATTVRAQS
Trigger: GGATTGTGCTCTGACTGTGGTTGCCTTGAGAAGTCAGACCGCTGAGTATATGCAAAGCCATGTGGAAGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522894.5
3UTR-3UTR CAA 90 bp GCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTTAACAGAACAACCCAACACTaGGTAGAAATACTCAGTTCA +
Preference number: 3 (lower is better)
Translates to: ANRGPSWSMNGVLYNELNRTTQH*VEILSS
Trigger: TGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCT...GTTAAGTTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
3UTR-3UTR CAA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAAAGAACAACCCAACACTaGGTAGAAATACTCAGTTCA +
Preference number: 3 (lower is better)
Translates to: ISANRGPSWSMNGVLYNERTTQH*VEILSS
Trigger: TGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCT...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
3UTR-3UTR CAA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATATGCTACTCCCTAAAATaGCACAAGGTAAAGGCCACA +
Preference number: 3 (lower is better)
Translates to: RKNTVVSNLKSELEQPFICYSLK*HKVKAT
Trigger: TGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCA...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
3UTR-3UTR CAA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATACAAGTAAATGTGGTCTaGGACCTTTTACACTGCTAC +
Preference number: 3 (lower is better)
Translates to: RKNTVVSNLKSELEQPFIQVNVV*DLLHCY
Trigger: GTAGCAGTGTAAAAGGTCCAAGACCACATTTACTTG...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
3UTR-3UTR CAA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATAAGAACAACCCAACACTaGGTAGAAATACTCAGTTCA +
Preference number: 3 (lower is better)
Translates to: RKNTVVSNLKSELEQPFIRTTQH*VEILSS
Trigger: TGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCT...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
3UTR-3UTR CAA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATAGCAATGACAAAGATATaGGGTAAACTTCTTCAAGAC +
Preference number: 3 (lower is better)
Translates to: RKNTVVSNLKSELEQPFIAMTKI*GKLLQD
Trigger: GTCTTGAAGAAGTTTACCCAATATCTTTGTCATTGC...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
3UTR-3UTR CAA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATGCAATGACAAAGATATaGGGTAAACTTCTTCAAGAC +
Preference number: 3 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYAMTKI*GKLLQD
Trigger: GTCTTGAAGAAGTTTACCCAATATCTTTGTCATTGC...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCTCCATTGGCTACGGCTaGGACCCAGCCCCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGSIGYG*DPAPPS
Trigger: TGAAGGCGGGGCTGGGTCCCAGCCGTAGCCAATGGA...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000285420.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACCACCCGGGGCTCCATTaGCTACGGCTGGGACCCAGC +
Preference number: 4 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHHPGLH*LRLGPS
Trigger: GCTGGGTCCCAGCCGTAGCCAATGGAGCCCCGGGTG...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285420.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTTCAATACCGCCTCCATaGCGACCAGGTACCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPSIPPP*RPGTPA
Trigger: TGCTGGGGTACCTGGTCGTCATGGAGGCGGTATTGA...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTCCATTGGCTACGGCTaGGACCCAGCCCCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: KLHCISLIDTMVTAIKFISIGYG*DPAPPS
Trigger: TGAAGGCGGGGCTGGGTCCCAGCCGTAGCCAATGGA...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285420.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATACACCCGGGGCTCCATTaGCTACGGCTGGGACCCAGC +
Preference number: 4 (lower is better)
Translates to: RKNTVVSNLKSELEQPFIHPGLH*LRLGPS
Trigger: GCTGGGTCCCAGCCGTAGCCAATGGAGCCCCGGGTG...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285420.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACTCAATACCGCCTCCATaGCGACCAGGTACCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHSIPPP*RPGTPA
Trigger: TGCTGGGGTACCTGGTCGTCATGGAGGCGGTATTGA...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp GCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTTAACTCAATACCGCCTCCATaGCGACCAGGTACCCCAGCA +
Preference number: 4 (lower is better)
Translates to: ANRGPSWSMNGVLYNELNSIPPP*RPGTPA
Trigger: TGCTGGGGTACCTGGTCGTCATGGAGGCGGTATTGA...GTTAAGTTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp AAGATTTCCAAAGGCCATACAGCTGGTAAGAGCAGAGCAGGGACCAAGGACAACGACCATCTTGGTCTATaGATGGTGTTCTCTACAATG +
Preference number: 4 (lower is better)
Translates to: KISKGHTAGKSRAGTKDNDHLGL*MVFSTM
Trigger: CATTGTAGAGAACACCATTCATAGACCAAGATGGTC...GTTGTCCTTGGTCCCTGCTCTGCTCTTACCAGCTGTATGGCCTTTGGAAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522894.5
CDS-3UTR TCA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCTTACTTGCTATCAATaGCCCTGCCAGCTTCCCACA +
Preference number: 4 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGLTCYQ*PCQLPT
Trigger: TGTGGGAAGCTGGCAGGGTCATTGATAGCAAGTAAG...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCTGCCTTCTCAGCAGCTaGTCTTCCTCATCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGCLLSS*SSSSSS
Trigger: AGAGCTTGATGAGGAAGAGCAGCTGCTGAGAAGGCA...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp CTGAGGAAACAGCACGCAGAAAGATTTCCAAAGGCCATACAGCTGGTAAGAGCAAAGCTGACCTCCCCATaGAGCTGTGTTTACAATATC +
Preference number: 4 (lower is better)
Translates to: LRKQHAERFPKAIQLVRAKLTSP*SCVYNI
Trigger: GATATTGTAAACACAGCTGCATGGGGAGGTCAGCTT...TGCTCTTACCAGCTGTATGGCCTTTGGAAATCTTTCTGCGTGCTGTTTCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522894.5
CDS-3UTR CCA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATTCCATTGGCTACGGCTaGGACCCAGCCCCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYSIGYG*DPAPPS
Trigger: TGAAGGCGGGGCTGGGTCCCAGCCGTAGCCAATGGA...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285420.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTCTTACTTGCTATCAATaGCCCTGCCAGCTTCCCACA +
Preference number: 4 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPLTCYQ*PCQLPT
Trigger: TGTGGGAAGCTGGCAGGGTCATTGATAGCAAGTAAG...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCACTCCTTCTTCTCTTTaGGATGCCTTCTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGTPSSL*DAFSAA
Trigger: AGCTGCTGAGAAGGCATCGCAAAGAGAAGAAGGAGT...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp GAGCTCTTAGCTCAAGCTGACCTCCCCATGCAGCTGTGTTTACAATATCTTCACGTAGTCAGCTTCAATTaGTCCAGTTCCTCTCTATGT +
Preference number: 4 (lower is better)
Translates to: ELLAQADLPMQLCLQYLHVVSFN*SSSSLC
Trigger: ACATAGAGAGGAACTGGAGCAATTGAAGCTGACTAC...GTGAAGATATTGTAAACACAGCTGCATGGGGAGGTCAGCTTGAGCTAAGAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522894.5
CDS-3UTR CCA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACATTGTTACCTGCTaGGCGTGTGAAAAGACTGAC +
Preference number: 4 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGHIVTC*ACEKTD
Trigger: GTCAGTCTTTTCACACGCCCAGCAGGTAACAATGTG...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATTCAATACCGCCTCCATaGCGACCAGGTACCCCAGCA +
Preference number: 4 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYSIPPP*RPGTPA
Trigger: TGCTGGGGTACCTGGTCGTCATGGAGGCGGTATTGA...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTGCATTCTTCATGCCCTaGATTTTGGCTTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPAFFMP*ILACNS
Trigger: GGAGTTGCAAGCCAAAATTCAGGGCATGAAGAATGC...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTGGCCACATCTTCGGTaGGTTGCTTCCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KLHCISLIDTMVTAIKFIWPHLR*VASSSS
Trigger: AGAAGAGGAGGAAGCAACTCACCGAAGATGTGGCCA...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAATGGCCACATCTTCGGTaGGTTGCTTCCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: ISANRGPSWSMNGVLYNEWPHLR*VASSSS
Trigger: AGAAGAGGAGGAAGCAACTCACCGAAGATGTGGCCA...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTATATACTCAGCGGTCTaGCTTCTCAAGGCAACCACA +
Preference number: 4 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPIYSAV*LLKATT
Trigger: TGTGGTTGCCTTGAGAAGTCAGACCGCTGAGTATAT...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACCTTACTTGCTATCAATaGCCCTGCCAGCTTCCCACA +
Preference number: 4 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHLTCYQ*PCQLPT
Trigger: TGTGGGAAGCTGGCAGGGTCATTGATAGCAAGTAAG...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp GCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTTAACTGCCTTCTCAGCAGCTaGTCTTCCTCATCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: ANRGPSWSMNGVLYNELNCLLSS*SSSSSS
Trigger: AGAGCTTGATGAGGAAGAGCAGCTGCTGAGAAGGCA...GTTAAGTTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp AGATTTCCAAAGGCCATACAGCTGGTAAGAGCAGAGCAGGGACCAAGGACAACACCACTAAGAAGACACTaGTTAAAGTTTATCTCTGAC +
Preference number: 4 (lower is better)
Translates to: RFPKAIQLVRAEQGPRTTPLRRH*LKFISD
Trigger: GTCAGAGATAAACTTTAACCAGTGTCTTCTTAGTGG...TGTTGTCCTTGGTCCCTGCTCTGCTCTTACCAGCTGTATGGCCTTTGGAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522894.5
CDS-3UTR CCA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTCACATTGTTACCTGCTaGGCGTGTGAAAAGACTGAC +
Preference number: 4 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPHIVTC*ACEKTD
Trigger: GTCAGTCTTTTCACACGCCCAGCAGGTAACAATGTG...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACGATATCCGAGGTGGCTaGTTCTCAAGCACCAAGTTT +
Preference number: 4 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHDIRGG*FSSTKF
Trigger: AAACTTGGTGCTTGAGAATCAGCCACCTCGGATATC...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp GCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTTAACATATACTCAGCGGTCTaGCTTCTCAAGGCAACCACA +
Preference number: 4 (lower is better)
Translates to: ANRGPSWSMNGVLYNELNIYSAV*LLKATT
Trigger: TGTGGTTGCCTTGAGAAGTCAGACCGCTGAGTATAT...GTTAAGTTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACATATACTCAGCGGTCTaGCTTCTCAAGGCAACCACA +
Preference number: 4 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHIYSAV*LLKATT
Trigger: TGTGGTTGCCTTGAGAAGTCAGACCGCTGAGTATAT...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAATGCCTTCTCAGCAGCTaGTCTTCCTCATCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: ISANRGPSWSMNGVLYNECLLSS*SSSSSS
Trigger: AGAGCTTGATGAGGAAGAGCAGCTGCTGAGAAGGCA...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTGCCTTCTCAGCAGCTaGTCTTCCTCATCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: KLHCISLIDTMVTAIKFICLLSS*SSSSSS
Trigger: AGAGCTTGATGAGGAAGAGCAGCTGCTGAGAAGGCA...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp GCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTTAACACTCCTTCTTCTCTTTaGGATGCCTTCTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ANRGPSWSMNGVLYNELNTPSSL*DAFSAA
Trigger: AGCTGCTGAGAAGGCATCGCAAAGAGAAGAAGGAGT...GTTAAGTTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTACATCTTCGGTGAGTTaGTTCCTCCTCTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPTSSVS*FLLFLS
Trigger: TGACAAGAAGAGGAGGAAGCAACTCACCGAAGATGT...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCGTAGTCAGCTTCAATTaGTCCAGTTCCTCTCTATGT +
Preference number: 4 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGVVSFN*SSSSLC
Trigger: ACATAGAGAGGAACTGGAGCAATTGAAGCTGACTAC...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCAATAGGGGACCATCTTaGTCTATGAATGGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGNRGPS*SMNGVL
Trigger: GAGAACACCATTCATAGACCAAGATGGTCCCCTATT...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACCACATTGTTACCTGCTaGGCGTGTGAAAAGACTGAC +
Preference number: 4 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHHIVTC*ACEKTD
Trigger: GTCAGTCTTTTCACACGCCCAGCAGGTAACAATGTG...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp GCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTTAACCACATTGTTACCTGCTaGGCGTGTGAAAAGACTGAC +
Preference number: 4 (lower is better)
Translates to: ANRGPSWSMNGVLYNELNHIVTC*ACEKTD
Trigger: GTCAGTCTTTTCACACGCCCAGCAGGTAACAATGTG...GTTAAGTTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATATGGCCACATCTTCGGTaGGTTGCTTCCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RKNTVVSNLKSELEQPFIWPHLR*VASSSS
Trigger: AGAAGAGGAGGAAGCAACTCACCGAAGATGTGGCCA...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp TCACTTTCCATATGTCTGGCTCCTGTTAAGTTTTCAATTTCAGCTTCAGCTATCGATATCCGAGGTGGCTaGTTCTCAAGCACCAAGTTT +
Preference number: 4 (lower is better)
Translates to: SLSICLAPVKFSISASAIDIRGG*FSSTKF
Trigger: AAACTTGGTGCTTGAGAATCAGCCACCTCGGATATC...GATAGCTGAAGCTGAAATTGAAAACTTAACAGGAGCCAGACATATGGAAAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522894.5
CDS-3UTR TCA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAAGATATCCGAGGTGGCTaGTTCTCAAGCACCAAGTTT +
Preference number: 4 (lower is better)
Translates to: ISANRGPSWSMNGVLYNEDIRGG*FSSTKF
Trigger: AAACTTGGTGCTTGAGAATCAGCCACCTCGGATATC...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp ATTTCAGCTTCAGCTATCCGTTCTTCTCGCTCCTTTTCCAATGCAGCTTTCTTTTCTCTTTTGTGCTTTTaGTATCCGAGGTGGCTGATT +
Preference number: 4 (lower is better)
Translates to: ISASAIRSSRSFSNAAFFSLLCF*YPRWLI
Trigger: AATCAGCCACCTCGGATATCAAAAGCACAAAAGAGA...AAAGAAAGCTGCATTGGAAAAGGAGCGAGAAGAACGGATAGCTGAAGCTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000522894.5
CDS-3UTR TCA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTTCTCTTTTGTGCTTTTaGTATCCGAGGTGGCTGATT +
Preference number: 4 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPSLLCF*YPRWLI
Trigger: AATCAGCCACCTCGGATATCAAAAGCACAAAAGAGA...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTATATACTCAGCGGTCTaGCTTCTCAAGGCAACCACA +
Preference number: 4 (lower is better)
Translates to: KLHCISLIDTMVTAIKFIIYSAV*LLKATT
Trigger: TGTGGTTGCCTTGAGAAGTCAGACCGCTGAGTATAT...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTTGGCTTGTAATCTTTTaGACTGGAAAGCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPWLVIF*TGKPSG
Trigger: TCCTGAAGGCTTTCCAGTTCAAAAGATTACAAGCCA...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACCTCATTTTCCTCTTCTaGGGAAACAGCACGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHLIFLF*GNSTQK
Trigger: TTTCTGCGTGCTGTTTCCTCAGAAGAGGAAAATGAG...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522894.5
ENST00000615618.1
CDS-3UTR GCA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTACTCCTTCTTCTCTTTaGGATGCCTTCTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KLHCISLIDTMVTAIKFITPSSL*DAFSAA
Trigger: AGCTGCTGAGAAGGCATCGCAAAGAGAAGAAGGAGT...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACAAGCTGACCTCCCCATaGAGCTGTGTTTACAATATC +
Preference number: 4 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHKLTSP*SCVYNI
Trigger: GATATTGTAAACACAGCTGCATGGGGAGGTCAGCTT...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCGTAAAGGCCACAAAATaGTTGTTCCTTCAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGVKATK*LFLQGK
Trigger: CTTTCCTTGAAGGAACAAGCATTTTGTGGCCTTTAC...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCTTGGACCTTTTACACTaGTACTCCCTAAAATTGCAC +
Preference number: 4 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGLDLLH*YSLKLH
Trigger: GTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAA...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACTCTCTTTTGTGCTTTTaGTATCCGAGGTGGCTGATT +
Preference number: 4 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHSLLCF*YPRWLI
Trigger: AATCAGCCACCTCGGATATCAAAAGCACAAAAGAGA...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACGACCATCTTGGTCTATaGATGGTGTTCTCTACAATG +
Preference number: 4 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHDHLGL*MVFSTM
Trigger: CATTGTAGAGAACACCATTCATAGACCAAGATGGTC...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTTCAAATCCTAGAGAATaGGGCAAGAAGGGAAATATC +
Preference number: 4 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPSNPRE*GKKGNI
Trigger: GATATTTCCCTTCTTGCCTCATTCTCTAGGATTTGA...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACTGGCTTGTAATCTTTTaGACTGGAAAGCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHWLVIF*TGKPSG
Trigger: TCCTGAAGGCTTTCCAGTTCAAAAGATTACAAGCCA...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTGGAAAGAACAGAAGCTaGCCATACAAATCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPGKNRS*PYKSCS
Trigger: TGAACAAGATTTGTATGGTCAGCTTCTGTTCTTTCC...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp GAGGAGAATCTGCCTGTATTATCTCTATTGGTGTTTGTAAAATGTGAGACAGAGCTCATTTTCCTCTTCTaGGGAAACAGCACGCAGAAA +
Preference number: 4 (lower is better)
Translates to: EENLPVLSLLVFVKCETELIFLF*GNSTQK
Trigger: TTTCTGCGTGCTGTTTCCTCAGAAGAGGAAAATGAG...CTCTGTCTCACATTTTACAAACACCAATAGAGATAATACAGGCAGATTCTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522894.5
CDS-3UTR GCA 90 bp GGAGTATACATATCTCCTGTATTAGGGTTTGTTAAAAATGGCAGAAAGTCTTCCACTCCTTCTTCTCTTTaGGATGCCTTCTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GVYISPVLGFVKNGRKSSTPSSL*DAFSAA
Trigger: AGCTGCTGAGAAGGCATCGCAAAGAGAAGAAGGAGT...GGAAGACTTTCTGCCATTTTTAACAAACCCTAATACAGGAGATATGTATACTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522894.5
CDS-3UTR GCA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAAACATCTTCGGTGAGTTaGTTCCTCCTCTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: ISANRGPSWSMNGVLYNETSSVS*FLLFLS
Trigger: TGACAAGAAGAGGAGGAAGCAACTCACCGAAGATGT...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTACATCTTCGGTGAGTTaGTTCCTCCTCTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: KLHCISLIDTMVTAIKFITSSVS*FLLFLS
Trigger: TGACAAGAAGAGGAGGAAGCAACTCACCGAAGATGT...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACGTAGTCAGCTTCAATTaGTCCAGTTCCTCTCTATGT +
Preference number: 4 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHVVSFN*SSSSLC
Trigger: ACATAGAGAGGAACTGGAGCAATTGAAGCTGACTAC...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAAAAGCTGACCTCCCCATaGAGCTGTGTTTACAATATC +
Preference number: 4 (lower is better)
Translates to: ISANRGPSWSMNGVLYNEKLTSP*SCVYNI
Trigger: GATATTGTAAACACAGCTGCATGGGGAGGTCAGCTT...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTAAGCTGACCTCCCCATaGAGCTGTGTTTACAATATC +
Preference number: 4 (lower is better)
Translates to: KLHCISLIDTMVTAIKFIKLTSP*SCVYNI
Trigger: GATATTGTAAACACAGCTGCATGGGGAGGTCAGCTT...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp ATTTCAGCTTCAGCTATCCGTTCTTCTCGCTCCTTTTCCAATGCAGCTTTCTTTAATGGGAGGAGAATCTaGCTGTATTATCTCTATTGG +
Preference number: 4 (lower is better)
Translates to: ISASAIRSSRSFSNAAFFNGRRI*LYYLYW
Trigger: CCAATAGAGATAATACAGGCAGATTCTCCTCCCATT...AAAGAAAGCTGCATTGGAAAAGGAGCGAGAAGAACGGATAGCTGAAGCTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522894.5
CDS-3UTR GCA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTAATGGGAGGAGAATCTaGCTGTATTATCTCTATTGG +
Preference number: 4 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPNGRRI*LYYLYW
Trigger: CCAATAGAGATAATACAGGCAGATTCTCCTCCCATT...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTGTAAAGGCCACAAAATaGTTGTTCCTTCAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPVKATK*LFLQGK
Trigger: CTTTCCTTGAAGGAACAAGCATTTTGTGGCCTTTAC...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp GCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTTAACTCATGCCCTGAATTTTaGCTTGCAACTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ANRGPSWSMNGVLYNELNSCPEF*LATPSS
Trigger: AGAAGAAGGAGTTGCAAGCCAAAATTCAGGGCATGA...GTTAAGTTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACTTTCCATATGTCTaGCTCCTGTTAAGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGHFPYV*LLLSFQ
Trigger: TTGAAAACTTAACAGGAGCCAGACATATGGAAAGTG...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCCACTAAGAAGACACTaGTTAAAGTTTATCTCTGAC +
Preference number: 4 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGPLRRH*LKFISD
Trigger: GTCAGAGATAAACTTTAACCAGTGTCTTCTTAGTGG...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACAATAGGGGACCATCTTaGTCTATGAATGGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHNRGPS*SMNGVL
Trigger: GAGAACACCATTCATAGACCAAGATGGTCCCCTATT...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp GCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTTAACAATAGGGGACCATCTTaGTCTATGAATGGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: ANRGPSWSMNGVLYNELNNRGPS*SMNGVL
Trigger: GAGAACACCATTCATAGACCAAGATGGTCCCCTATT...GTTAAGTTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTGTCTCATCGATACCATaGTTACTGCAATCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPVSSIP*LLQSSS
Trigger: TGAACTTGATTGCAGTAACCATGGTATCGATGAGAC...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCTGTAATCTTTTGAACTaGAAAGCCTTCAGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGCNLLN*KAFRKY
Trigger: GTACTTCCTGAAGGCTTTCCAGTTCAAAAGATTACA...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp GCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTTAACCTCAAGCACCAAGTTTaGAATGTTAACAGCAACAGA +
Preference number: 4 (lower is better)
Translates to: ANRGPSWSMNGVLYNELNLKHQV*NVNSNR
Trigger: TCTGTTGCTGTTAACATTTCAAACTTGGTGCTTGAG...GTTAAGTTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACCTCAAGCACCAAGTTTaGAATGTTAACAGCAACAGA +
Preference number: 4 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHLKHQV*NVNSNR
Trigger: TCTGTTGCTGTTAACATTTCAAACTTGGTGCTTGAG...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATAGATATCCGAGGTGGCTaGTTCTCAAGCACCAAGTTT +
Preference number: 4 (lower is better)
Translates to: RKNTVVSNLKSELEQPFIDIRGG*FSSTKF
Trigger: AAACTTGGTGCTTGAGAATCAGCCACCTCGGATATC...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATGATATCCGAGGTGGCTaGTTCTCAAGCACCAAGTTT +
Preference number: 4 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYDIRGG*FSSTKF
Trigger: AAACTTGGTGCTTGAGAATCAGCCACCTCGGATATC...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAATCTCTTTTGTGCTTTTaGTATCCGAGGTGGCTGATT +
Preference number: 4 (lower is better)
Translates to: ISANRGPSWSMNGVLYNESLLCF*YPRWLI
Trigger: AATCAGCCACCTCGGATATCAAAAGCACAAAAGAGA...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAAGACCATCTTGGTCTATaGATGGTGTTCTCTACAATG +
Preference number: 4 (lower is better)
Translates to: ISANRGPSWSMNGVLYNEDHLGL*MVFSTM
Trigger: CATTGTAGAGAACACCATTCATAGACCAAGATGGTC...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp GCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTTAACTCAAATCCTAGAGAATaGGGCAAGAAGGGAAATATC +
Preference number: 4 (lower is better)
Translates to: ANRGPSWSMNGVLYNELNSNPRE*GKKGNI
Trigger: GATATTTCCCTTCTTGCCTCATTCTCTAGGATTTGA...GTTAAGTTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAATGGCTTGTAATCTTTTaGACTGGAAAGCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ISANRGPSWSMNGVLYNEWLVIF*TGKPSG
Trigger: TCCTGAAGGCTTTCCAGTTCAAAAGATTACAAGCCA...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACGGAAAGAACAGAAGCTaGCCATACAAATCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHGKNRS*PYKSCS
Trigger: TGAACAAGATTTGTATGGTCAGCTTCTGTTCTTTCC...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp GCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTTAACGGAAAGAACAGAAGCTaGCCATACAAATCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: ANRGPSWSMNGVLYNELNGKNRS*PYKSCS
Trigger: TGAACAAGATTTGTATGGTCAGCTTCTGTTCTTTCC...GTTAAGTTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATATTCTTCTCTTTGCGATaGCTTCTCAGCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: RKNTVVSNLKSELEQPFIFFSLR*LLSSCS
Trigger: AGAGCAGCTGCTGAGAAGGCATCGCAAAGAGAAGAA...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCGCAAGCTTCTTAGCTTaGTTTGATAAGGCTATATAT +
Preference number: 4 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGASFLA*FDKAIY
Trigger: ATATATAGCCTTATCAAAGCAAGCTAAGAAGCTTGC...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACGTAAAGGCCACAAAATaGTTGTTCCTTCAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHVKATK*LFLQGK
Trigger: CTTTCCTTGAAGGAACAAGCATTTTGTGGCCTTTAC...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp GCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTTAACTTGGACCTTTTACACTaGTACTCCCTAAAATTGCAC +
Preference number: 4 (lower is better)
Translates to: ANRGPSWSMNGVLYNELNLDLLH*YSLKLH
Trigger: GTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAA...GTTAAGTTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACTTGGACCTTTTACACTaGTACTCCCTAAAATTGCAC +
Preference number: 4 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHLDLLH*YSLKLH
Trigger: GTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAA...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAATCATGCCCTGAATTTTaGCTTGCAACTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ISANRGPSWSMNGVLYNESCPEF*LATPSS
Trigger: AGAAGAAGGAGTTGCAAGCCAAAATTCAGGGCATGA...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTCATGCCCTGAATTTTaGCTTGCAACTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KLHCISLIDTMVTAIKFISCPEF*LATPSS
Trigger: AGAAGAAGGAGTTGCAAGCCAAAATTCAGGGCATGA...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp CCACAGTCAGAGCACAATCCTTTTCTTTCAGTTGATCTTCAATGGCTTTATACATCATGCCCTGAATTTTaGCTTGCAACTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PQSEHNPFLSVDLQWLYTSCPEF*LATPSS
Trigger: AGAAGAAGGAGTTGCAAGCCAAAATTCAGGGCATGA...TGTATAAAGCCATTGAAGATCAACTGAAAGAAAAGGATTGTGCTCTGACTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522894.5
CDS-3UTR CCA 90 bp GCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTTAACTCTTCTTGTCATTCTTaGGAACAGCATTCTTCATGC +
Preference number: 4 (lower is better)
Translates to: ANRGPSWSMNGVLYNELNSSCHS*EQHSSC
Trigger: GCATGAAGAATGCTGTTCCCAAGAATGACAAGAAGA...GTTAAGTTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACTCTTCTTGTCATTCTTaGGAACAGCATTCTTCATGC +
Preference number: 4 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHSSCHS*EQHSSC
Trigger: GCATGAAGAATGCTGTTCCCAAGAATGACAAGAAGA...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTCACTTTCCATATGTCTaGCTCCTGTTAAGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPHFPYV*LLLSFQ
Trigger: TTGAAAACTTAACAGGAGCCAGACATATGGAAAGTG...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCTTCTGAAATTCTTCTaGAGTATACATATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGLLKFF*SIHISC
Trigger: ACAGGAGATATGTATACTCCAGAAGAATTTCAGAAG...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAAAATAGGGGACCATCTTaGTCTATGAATGGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: ISANRGPSWSMNGVLYNENRGPS*SMNGVL
Trigger: GAGAACACCATTCATAGACCAAGATGGTCCCCTATT...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTCAAGCACCAAGTTTaGAATGTTAACAGCAACAGA +
Preference number: 4 (lower is better)
Translates to: ISANRGPSWSMNGVLYNELKHQV*NVNSNR
Trigger: TCTGTTGCTGTTAACATTTCAAACTTGGTGCTTGAG...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAAGGAAAGAACAGAAGCTaGCCATACAAATCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: ISANRGPSWSMNGVLYNEGKNRS*PYKSCS
Trigger: TGAACAAGATTTGTATGGTCAGCTTCTGTTCTTTCC...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp ACTATAATGGGAGGAGAATCTGCCTGTATTATCTCTATTGGTGTTTGTAAAATGACATCTTCGGTGAGTTaGTTCCTCCTCTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: TIMGGESACIISIGVCKMTSSVS*FLLFLS
Trigger: TGACAAGAAGAGGAGGAAGCAACTCACCGAAGATGT...CATTTTACAAACACCAATAGAGATAATACAGGCAGATTCTCCTCCCATTATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522894.5
CDS-3UTR GCA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATACATCTTCGGTGAGTTaGTTCCTCCTCTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYTSSVS*FLLFLS
Trigger: TGACAAGAAGAGGAGGAAGCAACTCACCGAAGATGT...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATAAAGCTGACCTCCCCATaGAGCTGTGTTTACAATATC +
Preference number: 4 (lower is better)
Translates to: RKNTVVSNLKSELEQPFIKLTSP*SCVYNI
Trigger: GATATTGTAAACACAGCTGCATGGGGAGGTCAGCTT...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTAATGGGAGGAGAATCTaGCTGTATTATCTCTATTGG +
Preference number: 4 (lower is better)
Translates to: KLHCISLIDTMVTAIKFINGRRI*LYYLYW
Trigger: CCAATAGAGATAATACAGGCAGATTCTCCTCCCATT...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAATTGGACCTTTTACACTaGTACTCCCTAAAATTGCAC +
Preference number: 4 (lower is better)
Translates to: ISANRGPSWSMNGVLYNELDLLH*YSLKLH
Trigger: GTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAA...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAATCTTCTTGTCATTCTTaGGAACAGCATTCTTCATGC +
Preference number: 4 (lower is better)
Translates to: ISANRGPSWSMNGVLYNESSCHS*EQHSSC
Trigger: GCATGAAGAATGCTGTTCCCAAGAATGACAAGAAGA...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp GAGGAGAATCTGCCTGTATTATCTCTATTGGTGTTTGTAAAATGTGAGACAGAGTCTTCTTGTCATTCTTaGGAACAGCATTCTTCATGC +
Preference number: 4 (lower is better)
Translates to: EENLPVLSLLVFVKCETESSCHS*EQHSSC
Trigger: GCATGAAGAATGCTGTTCCCAAGAATGACAAGAAGA...CTCTGTCTCACATTTTACAAACACCAATAGAGATAATACAGGCAGATTCTCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522894.5
CDS-3UTR CCA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTCTTCTGAAATTCTTCTaGAGTATACATATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPLLKFF*SIHISC
Trigger: ACAGGAGATATGTATACTCCAGAAGAATTTCAGAAG...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTGTCTCATCGATACCATaGTTACTGCAATCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: KLHCISLIDTMVTAIKFIVSSIP*LLQSSS
Trigger: TGAACTTGATTGCAGTAACCATGGTATCGATGAGAC...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp GCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTTAACTGTAATCTTTTGAACTaGAAAGCCTTCAGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: ANRGPSWSMNGVLYNELNCNLLN*KAFRKY
Trigger: GTACTTCCTGAAGGCTTTCCAGTTCAAAAGATTACA...GTTAAGTTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATTCTCTTTTGTGCTTTTaGTATCCGAGGTGGCTGATT +
Preference number: 4 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYSLLCF*YPRWLI
Trigger: AATCAGCCACCTCGGATATCAAAAGCACAAAAGAGA...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATAGTAGTCAGCTTCAATTaGTCCAGTTCCTCTCTATGT +
Preference number: 4 (lower is better)
Translates to: RKNTVVSNLKSELEQPFIVVSFN*SSSSLC
Trigger: ACATAGAGAGGAACTGGAGCAATTGAAGCTGACTAC...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATGTAGTCAGCTTCAATTaGTCCAGTTCCTCTCTATGT +
Preference number: 4 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYVVSFN*SSSSLC
Trigger: ACATAGAGAGGAACTGGAGCAATTGAAGCTGACTAC...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATTCATGCCCTGAATTTTaGCTTGCAACTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYSCPEF*LATPSS
Trigger: AGAAGAAGGAGTTGCAAGCCAAAATTCAGGGCATGA...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp TTATCTCTATTGGTGTTTGTAAAATGTGAGACAGAGCTCTTAGCTCAAGCTGACCACTTTCCATATGTCTaGCTCCTGTTAAGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: LSLLVFVKCETELLAQADHFPYV*LLLSFQ
Trigger: TTGAAAACTTAACAGGAGCCAGACATATGGAAAGTG...GTCAGCTTGAGCTAAGAGCTCTGTCTCACATTTTACAAACACCAATAGAGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522894.5
CDS-3UTR CCA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTGTAATCTTTTGAACTaGAAAGCCTTCAGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: KLHCISLIDTMVTAIKFICNLLN*KAFRKY
Trigger: GTACTTCCTGAAGGCTTTCCAGTTCAAAAGATTACA...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR TCA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATACTCAAGCACCAAGTTTaGAATGTTAACAGCAACAGA +
Preference number: 4 (lower is better)
Translates to: RKNTVVSNLKSELEQPFILKHQV*NVNSNR
Trigger: TCTGTTGCTGTTAACATTTCAAACTTGGTGCTTGAG...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATAATGGGAGGAGAATCTaGCTGTATTATCTCTATTGG +
Preference number: 4 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYNGRRI*LYYLYW
Trigger: CCAATAGAGATAATACAGGCAGATTCTCCTCCCATT...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATAAATGGGAGGAGAATCTaGCTGTATTATCTCTATTGG +
Preference number: 4 (lower is better)
Translates to: RKNTVVSNLKSELEQPFINGRRI*LYYLYW
Trigger: CCAATAGAGATAATACAGGCAGATTCTCCTCCCATT...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAAGCAAGCTTCTTAGCTTaGTTTGATAAGGCTATATAT +
Preference number: 4 (lower is better)
Translates to: ISANRGPSWSMNGVLYNEASFLA*FDKAIY
Trigger: ATATATAGCCTTATCAAAGCAAGCTAAGAAGCTTGC...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATATCTTCTTGTCATTCTTaGGAACAGCATTCTTCATGC +
Preference number: 4 (lower is better)
Translates to: RKNTVVSNLKSELEQPFISSCHS*EQHSSC
Trigger: GCATGAAGAATGCTGTTCCCAAGAATGACAAGAAGA...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTTCTGAAATTCTTCTaGAGTATACATATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ISANRGPSWSMNGVLYNELLKFF*SIHISC
Trigger: ACAGGAGATATGTATACTCCAGAAGAATTTCAGAAG...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTCTTCTGAAATTCTTCTaGAGTATACATATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: KLHCISLIDTMVTAIKFILLKFF*SIHISC
Trigger: ACAGGAGATATGTATACTCCAGAAGAATTTCAGAAG...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATGTCTCATCGATACCATaGTTACTGCAATCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYVSSIP*LLQSSS
Trigger: TGAACTTGATTGCAGTAACCATGGTATCGATGAGAC...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATCACTTTCCATATGTCTaGCTCCTGTTAAGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYHFPYV*LLLSFQ
Trigger: TTGAAAACTTAACAGGAGCCAGACATATGGAAAGTG...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATACACTTTCCATATGTCTaGCTCCTGTTAAGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: RKNTVVSNLKSELEQPFIHFPYV*LLLSFQ
Trigger: TTGAAAACTTAACAGGAGCCAGACATATGGAAAGTG...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATCCACTAAGAAGACACTaGTTAAAGTTTATCTCTGAC +
Preference number: 4 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYPLRRH*LKFISD
Trigger: GTCAGAGATAAACTTTAACCAGTGTCTTCTTAGTGG...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATACCACTAAGAAGACACTaGTTAAAGTTTATCTCTGAC +
Preference number: 4 (lower is better)
Translates to: RKNTVVSNLKSELEQPFIPLRRH*LKFISD
Trigger: GTCAGAGATAAACTTTAACCAGTGTCTTCTTAGTGG...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
3UTR CAA 72 bp TTGTGTTTTTCAGTAGCATTTAGAACAACCCAACACTaGGTAGAAATACTCAGTTCAGCACACTGTATTAAA +
Preference number: 4 (lower is better)
Translates to: LCFSVAFRTTQH*VEILSSAHCIK
Trigger: TTTAATACAGTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGAAAAACACAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR GCA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATGCAAGCTTCTTAGCTTaGTTTGATAAGGCTATATAT +
Preference number: 4 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYASFLA*FDKAIY
Trigger: ATATATAGCCTTATCAAAGCAAGCTAAGAAGCTTGC...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CCA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATCTTCTGAAATTCTTCTaGAGTATACATATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYLLKFF*SIHISC
Trigger: ACAGGAGATATGTATACTCCAGAAGAATTTCAGAAG...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS TCA 90 bp GCAGCTGCTCTTCCTCATCAAGCTCTTCGGTCAATACCGCCTCCATaGCGACCAGGTACCCCAGCACACGCGCTAGAAGAAACCTGCACC +
Preference number: 5 (lower is better)
Translates to: AAALPHQALRSIPPP*RPGTPAHALEETCT
Trigger: GGTGCAGGTTTCTTCTAGCGCGTGTGCTGGGGTACCTGGTCGTCATGGAGGCGGTATTGACCGAAGAGCTTGATGAGGAAGAGCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTTCACCCGGGGCTCCATaGGCTACGGCTGGGACCCAG +
Preference number: 5 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPSPGAP*ATAGTQ
Trigger: CTGGGTCCCAGCCGTAGCCAATGGAGCCCCGGGTGA...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000285420.8
ENST00000615618.1
ENST00000617869.4
CDS GCA 90 bp TTGGCTTGCAACTCCTTCTTCTCTTTGCGATGCCTTCTCAGCAGCTaGTCTTCCTCATCAAGCTCTTCGGTCAATACCGCCTCCATGACG +
Preference number: 5 (lower is better)
Translates to: LACNSFFSLRCLLSS*SSSSSSSVNTASMT
Trigger: CGTCATGGAGGCGGTATTGACCGAAGAGCTTGATGAGGAAGAGCAGCTGCTGAGAAGGCATCGCAAAGAGAAGAAGGAGTTGCAAGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000524027.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATTCACCCGGGGCTCCATaGGCTACGGCTGGGACCCAG +
Preference number: 5 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYSPGAP*ATAGTQ
Trigger: CTGGGTCCCAGCCGTAGCCAATGGAGCCCCGGGTGA...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285420.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATATCACCCGGGGCTCCATaGGCTACGGCTGGGACCCAG +
Preference number: 5 (lower is better)
Translates to: RKNTVVSNLKSELEQPFISPGAP*ATAGTQ
Trigger: CTGGGTCCCAGCCGTAGCCAATGGAGCCCCGGGTGA...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285420.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp AAGATTTCCAAAGGCCATACAGCTGGTAAGAGCAGAGCAGGGACCAAGGACAACGTCTCTTTTGTGCTTTaGATATCCGAGGTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: KISKGHTAGKSRAGTKDNVSFVL*ISEVAD
Trigger: ATCAGCCACCTCGGATATCAAAAGCACAAAAGAGAC...GTTGTCCTTGGTCCCTGCTCTGCTCTTACCAGCTGTATGGCCTTTGGAAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522894.5
CDS-3UTR CAA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTAACTCCTTCTTCTCTTaGCGATGCCTTCTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPNSFFS*RCLLSS
Trigger: GCTGCTGAGAAGGCATCGCAAAGAGAAGAAGGAGTT...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTCACATCTTCGGTGAGTaGCTTCCTCCTCTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPHIFGE*LPPLLV
Trigger: GACAAGAAGAGGAGGAAGCAACTCACCGAAGATGTG...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACGTCTTCCACATGGCTTaGCATATACTCAGCGGTCTG +
Preference number: 5 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHVFHMA*HILSGL
Trigger: CAGACCGCTGAGTATATGCAAAGCCATGTGGAAGAC...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCTCAGGAAGTACTTACTaGCTATCAATGACCCTGCCA +
Preference number: 5 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGSGSTY*LSMTLP
Trigger: TGGCAGGGTCATTGATAGCAAGTAAGTACTTCCTGA...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS TCA 90 bp TATCCAGGCACCCGTCTCTTTTGTGCTTTTGATATCCGAGGTGGCTaGTTCTCAAGCACCAAGTTTGAAATGTTAACAGCAACAGAATCT +
Preference number: 5 (lower is better)
Translates to: YPGTRLFCAFDIRGG*FSSTKFEMLTATES
Trigger: AGATTCTGTTGCTGTTAACATTTCAAACTTGGTGCTTGAGAATCAGCCACCTCGGATATCAAAAGCACAAAAGAGACGGGTGCCTGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522894.5
ENST00000524027.5
ENST00000615618.1
CDS-3UTR CAA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTAACTCCTTCTTCTCTTaGCGATGCCTTCTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: KLHCISLIDTMVTAIKFINSFFS*RCLLSS
Trigger: GCTGCTGAGAAGGCATCGCAAAGAGAAGAAGGAGTT...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTGCCCTGAATTTTGGCTaGCAACTCCTTCTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPALNFG*QLLLLF
Trigger: AAAGAGAAGAAGGAGTTGCAAGCCAAAATTCAGGGC...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTCACATCTTCGGTGAGTaGCTTCCTCCTCTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: KLHCISLIDTMVTAIKFIHIFGE*LPPLLV
Trigger: GACAAGAAGAGGAGGAAGCAACTCACCGAAGATGTG...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCATTTCTTTTTCCAACTaGGCCACATCTTCGGTGAGT +
Preference number: 5 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGISFSN*ATSSVS
Trigger: ACTCACCGAAGATGTGGCCAAGTTGGAAAAAGAAAT...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTGTCTCTTTTGTGCTTTaGATATCCGAGGTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPVSFVL*ISEVAD
Trigger: ATCAGCCACCTCGGATATCAAAAGCACAAAAGAGAC...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTGTCTTCCACATGGCTTaGCATATACTCAGCGGTCTG +
Preference number: 5 (lower is better)
Translates to: KLHCISLIDTMVTAIKFIVFHMA*HILSGL
Trigger: CAGACCGCTGAGTATATGCAAAGCCATGTGGAAGAC...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCAAGGCCACAAAATGCTaGTTCCTTCAAGGAAAGCAA +
Preference number: 5 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGKATKC*FLQGKQ
Trigger: TTGCTTTCCTTGAAGGAACAAGCATTTTGTGGCCTT...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTTGCTACTCCCTAAAATaGCACAAGGTAAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPCYSLK*HKVKAT
Trigger: TGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCA...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCAAGTAAATGTGGTCTaGGACCTTTTACACTGCTAC +
Preference number: 5 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGQVNVV*DLLHCY
Trigger: GTAGCAGTGTAAAAGGTCCAAGACCACATTTACTTG...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCTGACCATACAAATCTaGTTCATAACCACATTGGCC +
Preference number: 5 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGLTIQI*FITTLA
Trigger: GGCCAATGTGGTTATGAACAAGATTTGTATGGTCAG...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp GCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTTAACGCCCTGAATTTTGGCTaGCAACTCCTTCTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: ANRGPSWSMNGVLYNELNALNFG*QLLLLF
Trigger: AAAGAGAAGAAGGAGTTGCAAGCCAAAATTCAGGGC...GTTAAGTTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTATTTCTTTTTCCAACTaGGCCACATCTTCGGTGAGT +
Preference number: 5 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPISFSN*ATSSVS
Trigger: ACTCACCGAAGATGTGGCCAAGTTGGAAAAAGAAAT...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp GCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTTAACAGTAGTCAGCTTCAATaGCTCCAGTTCCTCTCTATG +
Preference number: 5 (lower is better)
Translates to: ANRGPSWSMNGVLYNELNSSQLQ*LQFLSM
Trigger: CATAGAGAGGAACTGGAGCAATTGAAGCTGACTACT...GTTAAGTTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACAGTAGTCAGCTTCAATaGCTCCAGTTCCTCTCTATG +
Preference number: 5 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHSSQLQ*LQFLSM
Trigger: CATAGAGAGGAACTGGAGCAATTGAAGCTGACTACT...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCTCTAGCTGCCAATATTaGAGCAAGTTTCTCACTTTC +
Preference number: 5 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGSSCQY*SKFLTF
Trigger: GAAAGTGAGAAACTTGCTCAAATATTGGCAGCTAGA...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp GCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTTAACTGCTACTCCCTAAAATaGCACAAGGTAAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: ANRGPSWSMNGVLYNELNCYSLK*HKVKAT
Trigger: TGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCA...GTTAAGTTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTCAAGTAAATGTGGTCTaGGACCTTTTACACTGCTAC +
Preference number: 5 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPQVNVV*DLLHCY
Trigger: GTAGCAGTGTAAAAGGTCCAAGACCACATTTACTTG...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTATGGCTTGTAATCTTTaGAACTGGAAAGCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPMACNL*NWKAFR
Trigger: CCTGAAGGCTTTCCAGTTCAAAAGATTACAAGCCAT...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp TGTGGTCTTGGACCTTTTACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCAGAATATAATTTGTTaGGCAGGCAGAATGGCTTGT +
Preference number: 5 (lower is better)
Translates to: CGLGPFTLLLPKIAQGKGQNIIC*AGRMAC
Trigger: ACAAGCCATTCTGCCTGCCAAACAAATTATATTCTG...GCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGTAAAAGGTCCAAGACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTCTGACCATACAAATCTaGTTCATAACCACATTGGCC +
Preference number: 5 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPLTIQI*FITTLA
Trigger: GGCCAATGTGGTTATGAACAAGATTTGTATGGTCAG...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATACACATCTTCGGTGAGTaGCTTCCTCCTCTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: RKNTVVSNLKSELEQPFIHIFGE*LPPLLV
Trigger: GACAAGAAGAGGAGGAAGCAACTCACCGAAGATGTG...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp TCAGTAGCATTTAGAACAACCCAACACTTGGTAGAAATACTCAGTTCAGCACACATTTCTTTTTCCAACTaGGCCACATCTTCGGTGAGT +
Preference number: 5 (lower is better)
Translates to: SVAFRTTQHLVEILSSAHISFSN*ATSSVS
Trigger: ACTCACCGAAGATGTGGCCAAGTTGGAAAAAGAAAT...GTGTGCTGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCTAAATGCTACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAAGTCTCTTTTGTGCTTTaGATATCCGAGGTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: ISANRGPSWSMNGVLYNEVSFVL*ISEVAD
Trigger: ATCAGCCACCTCGGATATCAAAAGCACAAAAGAGAC...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTGTCTCTTTTGTGCTTTaGATATCCGAGGTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: KLHCISLIDTMVTAIKFIVSFVL*ISEVAD
Trigger: ATCAGCCACCTCGGATATCAAAAGCACAAAAGAGAC...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATGTCTTCCACATGGCTTaGCATATACTCAGCGGTCTG +
Preference number: 5 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYVFHMA*HILSGL
Trigger: CAGACCGCTGAGTATATGCAAAGCCATGTGGAAGAC...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATAGTCTTCCACATGGCTTaGCATATACTCAGCGGTCTG +
Preference number: 5 (lower is better)
Translates to: RKNTVVSNLKSELEQPFIVFHMA*HILSGL
Trigger: CAGACCGCTGAGTATATGCAAAGCCATGTGGAAGAC...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTCAGGAAGTACTTACTaGCTATCAATGACCCTGCCA +
Preference number: 5 (lower is better)
Translates to: KLHCISLIDTMVTAIKFISGSTY*LSMTLP
Trigger: TGGCAGGGTCATTGATAGCAAGTAAGTACTTCCTGA...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTATTTCTTTTTCCAACTaGGCCACATCTTCGGTGAGT +
Preference number: 5 (lower is better)
Translates to: KLHCISLIDTMVTAIKFIISFSN*ATSSVS
Trigger: ACTCACCGAAGATGTGGCCAAGTTGGAAAAAGAAAT...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp ACACTGCTACTCCCTAAAATTGCACAAGGTAAAGGCCACAAAATGCTTGTTCCTGCAATGACAAAGATATaGGGTAAACTTCTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: TLLLPKIAQGKGHKMLVPAMTKI*GKLLQD
Trigger: GTCTTGAAGAAGTTTACCCAATATCTTTGTCATTGC...AGGAACAAGCATTTTGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTAAGGCCACAAAATGCTaGTTCCTTCAAGGAAAGCAA +
Preference number: 5 (lower is better)
Translates to: KLHCISLIDTMVTAIKFIKATKC*FLQGKQ
Trigger: TTGCTTTCCTTGAAGGAACAAGCATTTTGTGGCCTT...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTCAAGTAAATGTGGTCTaGGACCTTTTACACTGCTAC +
Preference number: 5 (lower is better)
Translates to: KLHCISLIDTMVTAIKFIQVNVV*DLLHCY
Trigger: GTAGCAGTGTAAAAGGTCCAAGACCACATTTACTTG...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAAATGGCTTGTAATCTTTaGAACTGGAAAGCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: ISANRGPSWSMNGVLYNEMACNL*NWKAFR
Trigger: CCTGAAGGCTTTCCAGTTCAAAAGATTACAAGCCAT...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTATGGCTTGTAATCTTTaGAACTGGAAAGCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: KLHCISLIDTMVTAIKFIMACNL*NWKAFR
Trigger: CCTGAAGGCTTTCCAGTTCAAAAGATTACAAGCCAT...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp GCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTTAACTCTTCAGAATATAATTaGTTTGGCAGGCAGAATGGC +
Preference number: 5 (lower is better)
Translates to: ANRGPSWSMNGVLYNELNSSEYN*FGRQNG
Trigger: GCCATTCTGCCTGCCAAACAAATTATATTCTGAAGA...GTTAAGTTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATAGCCCTGAATTTTGGCTaGCAACTCCTTCTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: RKNTVVSNLKSELEQPFIALNFG*QLLLLF
Trigger: AAAGAGAAGAAGGAGTTGCAAGCCAAAATTCAGGGC...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATAGTAGTCAGCTTCAATaGCTCCAGTTCCTCTCTATG +
Preference number: 5 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYSSQLQ*LQFLSM
Trigger: CATAGAGAGGAACTGGAGCAATTGAAGCTGACTACT...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATAAGTAGTCAGCTTCAATaGCTCCAGTTCCTCTCTATG +
Preference number: 5 (lower is better)
Translates to: RKNTVVSNLKSELEQPFISSQLQ*LQFLSM
Trigger: CATAGAGAGGAACTGGAGCAATTGAAGCTGACTACT...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp TTATCTCTATTGGTGTTTGTAAAATGTGAGACAGAGCTCTTAGCTCAAGCTGACTCTAGCTGCCAATATTaGAGCAAGTTTCTCACTTTC +
Preference number: 5 (lower is better)
Translates to: LSLLVFVKCETELLAQADSSCQY*SKFLTF
Trigger: GAAAGTGAGAAACTTGCTCAAATATTGGCAGCTAGA...GTCAGCTTGAGCTAAGAGCTCTGTCTCACATTTTACAAACACCAATAGAGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522894.5
CDS-3UTR CAA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTAGAACAACCCAACACTaGGTAGAAATACTCAGTTCA +
Preference number: 5 (lower is better)
Translates to: KLHCISLIDTMVTAIKFIRTTQH*VEILSS
Trigger: TGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCT...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp GCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACTTAACGCAATGACAAAGATATaGGGTAAACTTCTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: ANRGPSWSMNGVLYNELNAMTKI*GKLLQD
Trigger: GTCTTGAAGAAGTTTACCCAATATCTTTGTCATTGC...GTTAAGTTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATTGCTACTCCCTAAAATaGCACAAGGTAAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYCYSLK*HKVKAT
Trigger: TGTGGCCTTTACCTTGTGCAATTTTAGGGAGTAGCA...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATTCAGGAAGTACTTACTaGCTATCAATGACCCTGCCA +
Preference number: 5 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYSGSTY*LSMTLP
Trigger: TGGCAGGGTCATTGATAGCAAGTAAGTACTTCCTGA...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTCAGAATATAATTTGTTaGGCAGGCAGAATGGCTTGT +
Preference number: 5 (lower is better)
Translates to: KLHCISLIDTMVTAIKFIQNIIC*AGRMAC
Trigger: ACAAGCCATTCTGCCTGCCAAACAAATTATATTCTG...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAACAGAATATAATTTGTTaGGCAGGCAGAATGGCTTGT +
Preference number: 5 (lower is better)
Translates to: ISANRGPSWSMNGVLYNEQNIIC*AGRMAC
Trigger: ACAAGCCATTCTGCCTGCCAAACAAATTATATTCTG...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp AAGCTTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTCTTCAGAATATAATTaGTTTGGCAGGCAGAATGGC +
Preference number: 5 (lower is better)
Translates to: KLHCISLIDTMVTAIKFISSEYN*FGRQNG
Trigger: GCCATTCTGCCTGCCAAACAAATTATATTCTGAAGA...AATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS GCA 90 bp ACAGCAACAGAATCTATCTTATTCTCCTTAGTAGTCAGCTTCAATTaGTCCAGTTCCTCTCTATGTTTCTGTTCCATTTCTTTTTCCAAC +
Preference number: 5 (lower is better)
Translates to: TATESILFSLVVSFN*SSSSLCFCSISFSN
Trigger: GTTGGAAAAAGAAATGGAACAGAAACATAGAGAGGAACTGGAGCAATTGAAGCTGACTACTAAGGAGAATAAGATAGATTCTGTTGCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000524027.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATATTTCTTTTTCCAACTaGGCCACATCTTCGGTGAGT +
Preference number: 5 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYISFSN*ATSSVS
Trigger: ACTCACCGAAGATGTGGCCAAGTTGGAAAAAGAAAT...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp ATATCAGCTAATAGGGGACCATCTTGGTCTATGAATGGTGTTCTCTACAATGAAGCAATGACAAAGATATaGGGTAAACTTCTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: ISANRGPSWSMNGVLYNEAMTKI*GKLLQD
Trigger: GTCTTGAAGAAGTTTACCCAATATCTTTGTCATTGC...TTCATTGTAGAGAACACCATTCATAGACCAAGATGGTCCCCTATTAGCTGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATAATGGCTTGTAATCTTTaGAACTGGAAAGCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: RKNTVVSNLKSELEQPFIMACNL*NWKAFR
Trigger: CCTGAAGGCTTTCCAGTTCAAAAGATTACAAGCCAT...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATCTGACCATACAAATCTaGTTCATAACCACATTGGCC +
Preference number: 5 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYLTIQI*FITTLA
Trigger: GGCCAATGTGGTTATGAACAAGATTTGTATGGTCAG...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATTCTAGCTGCCAATATTaGAGCAAGTTTCTCACTTTC +
Preference number: 5 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYSSCQY*SKFLTF
Trigger: GAAAGTGAGAAACTTGCTCAAATATTGGCAGCTAGA...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATATCTAGCTGCCAATATTaGAGCAAGTTTCTCACTTTC +
Preference number: 5 (lower is better)
Translates to: RKNTVVSNLKSELEQPFISSCQY*SKFLTF
Trigger: GAAAGTGAGAAACTTGCTCAAATATTGGCAGCTAGA...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp TTCACTGCATTAGTCTCATCGATACCATGGTTACTGCAATCAAGTTCATTTTATAGAACAACCCAACACTaGGTAGAAATACTCAGTTCA +
Preference number: 5 (lower is better)
Translates to: FTALVSSIPWLLQSSSFYRTTQH*VEILSS
Trigger: TGAACTGAGTATTTCTACCAAGTGTTGGGTTGTTCT...ATAAAATGAACTTGATTGCAGTAACCATGGTATCGATGAGACTAATGCAGTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS-3UTR CAA 90 bp GGAGTATACATATCTCCTGTATTAGGGTTTGTTAAAAATGGCAGAAAGTCTTCCGCAATGACAAAGATATaGGGTAAACTTCTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: GVYISPVLGFVKNGRKSSAMTKI*GKLLQD
Trigger: GTCTTGAAGAAGTTTACCCAATATCTTTGTCATTGC...GGAAGACTTTCTGCCATTTTTAACAAACCCTAATACAGGAGATATGTATACTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522894.5
CDS-3UTR CAA 90 bp AGAAAGAATACTGTTGTGAGTAACCTGAAATCTGAGCTAGAACAACCATTCATATCTTCAGAATATAATTaGTTTGGCAGGCAGAATGGC +
Preference number: 5 (lower is better)
Translates to: RKNTVVSNLKSELEQPFISSEYN*FGRQNG
Trigger: GCCATTCTGCCTGCCAAACAAATTATATTCTGAAGA...TATGAATGGTTGTTCTAGCTCAGATTTCAGGTTACTCACAACAGTATTCTTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000615618.1
ENST00000617869.4
CDS TCA 72 bp CTTCCTCATCAAGCTCTTCGGTCAATACCGCCTCCATaGCGACCAGGTACCCCAGCACACGCGCTAGAAGAA +
Preference number: 6 (lower is better)
Translates to: LPHQALRSIPPP*RPGTPAHALEE
Trigger: TTCTTCTAGCGCGTGTGCTGGGGTACCTGGTCGTCATGGAGGCGGTATTGACCGAAGAGCTTGATGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000615618.1
ENST00000617869.4
CDS GCA 72 bp CGCCTTCAAGGCGGCACCGGATCTAAGCAAAGCCACTaGAAAGACGAGAAACTTAAATGGGGTGCTGCGCGT +
Preference number: 6 (lower is better)
Translates to: RLQGGTGSKQSH*KDEKLKWGAAR
Trigger: ACGCGCAGCACCCCATTTAAGTTTCTCGTCTTTGCAGTGGCTTTGCTTAGATCCGGTGCCGCCTTGAAGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285420.8
ENST00000615618.1
ENST00000617869.4
CDS CAA 72 bp GCTCCTTCTATCCAGGCACCCGTCTCTTTTGTGCTTTaGATATCCGAGGTGGCTGATTCTCAAGCACCAAGT +
Preference number: 6 (lower is better)
Translates to: APSIQAPVSFVL*ISEVADSQAPS
Trigger: ACTTGGTGCTTGAGAATCAGCCACCTCGGATATCAAAAGCACAAAAGAGACGGGTGCCTGGATAGAAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522894.5
ENST00000524027.5
ENST00000615618.1
CDS TCA 72 bp CTCCTTCTATCCAGGCACCCGTCTCTTTTGTGCTTTTaGTATCCGAGGTGGCTGATTCTCAAGCACCAAGTT +
Preference number: 6 (lower is better)
Translates to: LLLSRHPSLLCF*YPRWLILKHQV
Trigger: AACTTGGTGCTTGAGAATCAGCCACCTCGGATATCAAAAGCACAAAAGAGACGGGTGCCTGGATAGAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522894.5
ENST00000524027.5
ENST00000615618.1
CDS GCA 72 bp ATTTCTTTTTCCAACTTGGCCACATCTTCGGTGAGTTaGTTCCTCCTCTTCTTGTCATTCTTGGGAACAGCA +
Preference number: 6 (lower is better)
Translates to: ISFSNLATSSVS*FLLFLSFLGTA
Trigger: TGCTGTTCCCAAGAATGACAAGAAGAGGAGGAAGCAACTCACCGAAGATGTGGCCAAGTTGGAAAAAGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000524027.5
ENST00000615618.1
ENST00000617869.4
CDS TCA 72 bp TCCCGTCTCTTTTGTGCTTTTGATATCCGAGGTGGCTaGTTCTCAAGCACCAAGTTTGAAATGTTAACAGCA +
Preference number: 6 (lower is better)
Translates to: SRLFCAFDIRGG*FSSTKFEMLTA
Trigger: TGCTGTTAACATTTCAAACTTGGTGCTTGAGAATCAGCCACCTCGGATATCAAAAGCACAAAAGAGACGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000617869.4
CDS TCA 72 bp ACCCGTCTCTTTTGTGCTTTTGATATCCGAGGTGGCTaGTTCTCAAGCACCAAGTTTGAAATGTTAACAGCA +
Preference number: 6 (lower is better)
Translates to: TRLFCAFDIRGG*FSSTKFEMLTA
Trigger: TGCTGTTAACATTTCAAACTTGGTGCTTGAGAATCAGCCACCTCGGATATCAAAAGCACAAAAGAGACGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522894.5
ENST00000524027.5
ENST00000615618.1
CDS GCA 72 bp CCTCATAAGGATCATCTGGGTTCTTCTTACGCTCAGTaGTGGGAAGCACCTTATTTAAAAACAACTACAACA +
Preference number: 6 (lower is better)
Translates to: PHKDHLGSSYAQ*WEAPYLKTTTT
Trigger: TGTTGTAGTTGTTTTTAAATAAGGTGCTTCCCAGCACTGAGCGTAAGAAGAACCCAGATGATCCTTATGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524027.5
CDS GCA 72 bp GAATCTATCTTATTCTCCTTAGTAGTCAGCTTCAATTaGTCCAGTTCCTCTCTATGTTTCTGTTCCATTTCT +
Preference number: 6 (lower is better)
Translates to: ESILFSLVVSFN*SSSSLCFCSIS
Trigger: AGAAATGGAACAGAAACATAGAGAGGAACTGGAGCAATTGAAGCTGACTACTAAGGAGAATAAGATAGATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285420.8
ENST00000404789.8
ENST00000522894.5
ENST00000524027.5
ENST00000615618.1
ENST00000617869.4