Pregenerated sensors for OTUD6A (Homo sapiens)
Ensembl gene IDs: ENSG00000189401Ensembl transcript IDs: ENST00000338352.3
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCACTGTCTTCCACGCTGGAGTGCAAAGGCACGATCTCGGCTCACTaGAACCTCCGCTTCCCGTCAAGCGATTCTCCTGCCTTAGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: SLSSTLECKGTISAH*NLRFPSSDSPALAS Trigger: GGAGGCTAAGGCAGGAGAATCGCTTGACGGGAAGCGGAGGTTGCAGTGAGCCGAGATCGTGCCTTTGCACTCCAGCGTGGAAGACAGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| 3UTR GCA 90 bp | GGGCAAGAAGAGGTTAGAACTTTCAAATTTATGCCCCTCTGGTGGTaGAATGCAGAGATTTCCCTCATATTTCCGGGGAATTTCCCTCGA | + |
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Preference number: 1 (lower is better) Translates to: GQEEVRTFKFMPLWW*NAEISLIFPGNFPR Trigger: TCGAGGGAAATTCCCCGGAAATATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTCTTCTTGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| 3UTR-3UTR GCA 90 bp | TGCAGTAGTACGATCCCGGCCCACTGCAGCCTCCGCCTCCCGGGTTCAGTTGATAGCCTACTGAGGAGATaGGGCGACGGCGACAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: CSSTIPAHCSLRLPGSVDSLLRR*GDGDSF Trigger: GAAACTGTCGCCGTCGCCGCATCTCCTCAGTAGGCT...ATCAACTGAACCCGGGAGGCGGAGGCTGCAGTGGGCCGGGATCGTACTACTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| 3UTR CCA 72 bp | GAAGAGGTTAGAACTTTCAAATTTATGCCCCTCTGGTaGTGCAATGCAGAGATTTCCCTCATATTTCCGGGG | + |
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Preference number: 3 (lower is better) Translates to: EEVRTFKFMPLW*CNAEISLIFPG Trigger: CCCCGGAAATATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| 3UTR GCA 72 bp | GAGGTTAGAACTTTCAAATTTATGCCCCTCTGGTGGTaGAATGCAGAGATTTCCCTCATATTTCCGGGGAAT | + |
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Preference number: 3 (lower is better) Translates to: EVRTFKFMPLWW*NAEISLIFPGN Trigger: ATTCCCCGGAAATATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| 3UTR CCA 72 bp | CAAGAAGAGGTTAGAACTTTCAAATTTATGCCCCTCTaGTGGTGCAATGCAGAGATTTCCCTCATATTTCCG | + |
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Preference number: 3 (lower is better) Translates to: QEEVRTFKFMPL*WCNAEISLIFP Trigger: CGGAAATATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTCTTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | CTGAGGAGATGCGGCGACGGCGACAGTTTCCCGGGGCTGCTCAGCGCCTTGGGGTCATCTCCAGACCCCTaGCTCCCAGGATGGCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: LRRCGDGDSFPGLLSALGSSPDP*LPGWRR Trigger: TCGCCGCCATCCTGGGAGCCAGGGGTCTGGAGATGA...CCCCAAGGCGCTGAGCAGCCCCGGGAAACTGTCGCCGTCGCCGCATCTCCTCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | CTGAGGAGATGCGGCGACGGCGACAGTTTCCCGGGGCTGCTCAGCGCCTTGGGGCTCCCCATGCCGTGGTaGGCACGATGTTGTCGCAGT | + |
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Preference number: 4 (lower is better) Translates to: LRRCGDGDSFPGLLSALGLPMPW*ARCCRS Trigger: ACTGCGACAACATCGTGCGCACCACGGCATGGGGAG...CCCCAAGGCGCTGAGCAGCCCCGGGAAACTGTCGCCGTCGCCGCATCTCCTCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | GCAGTAGTACGATCCCGGCCCACTGCAGCCTCCGCCTCCCGGGTTCAGTTGATTTGCCTCTCGCGTTGGTaGCGGCGCAGTATGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: AVVRSRPTAASASRVQLICLSRW*RRSMRC Trigger: GCAGCGCATACTGCGCCGCCACCAACGCGAGAGGCA...AATCAACTGAACCCGGGAGGCGGAGGCTGCAGTGGGCCGGGATCGTACTACTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | AAACTGAGCCTACTGAGGAGATGCGGCGACGGCGACAGTTTCCCGGGGCTGCTCTCCTGCCTCTCGCGTTaGTGGCGGCGCAGTATGCGC | + |
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Preference number: 4 (lower is better) Translates to: KLSLLRRCGDGDSFPGLLSCLSR*WRRSMR Trigger: GCGCATACTGCGCCGCCACCAACGCGAGAGGCAGGA...GAGCAGCCCCGGGAAACTGTCGCCGTCGCCGCATCTCCTCAGTAGGCTCAGTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | TGCAGTAGTACGATCCCGGCCCACTGCAGCCTCCGCCTCCCGGGTTCAGTTGATGGCCTCCCCATGCCGTaGTGCGCACGATGTTGTCGC | + |
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Preference number: 4 (lower is better) Translates to: CSSTIPAHCSLRLPGSVDGLPMP*CARCCR Trigger: GCGACAACATCGTGCGCACCACGGCATGGGGAGGCC...ATCAACTGAACCCGGGAGGCGGAGGCTGCAGTGGGCCGGGATCGTACTACTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR TCA 90 bp | AAACTGAGCCTACTGAGGAGATGCGGCGACGGCGACAGTTTCCCGGGGCTGCTCTCCTGCCGGTGCTTCTaGGCCATCTCGGCCTCCATG | + |
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Preference number: 4 (lower is better) Translates to: KLSLLRRCGDGDSFPGLLSCRCF*AISASM Trigger: CATGGAGGCCGAGATGGCTCAGAAGCACCGGCAGGA...GAGCAGCCCCGGGAAACTGTCGCCGTCGCCGCATCTCCTCAGTAGGCTCAGTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | AAACTGAGCCTACTGAGGAGATGCGGCGACGGCGACAGTTTCCCGGGGCTGCTCACAGTTTCCCGGGGCTaGTCAGCGCCTTGGGGCCTA | + |
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Preference number: 4 (lower is better) Translates to: KLSLLRRCGDGDSFPGLLTVSRG*SAPWGL Trigger: TAGGCCCCAAGGCGCTGAGCAGCCCCGGGAAACTGT...GAGCAGCCCCGGGAAACTGTCGCCGTCGCCGCATCTCCTCAGTAGGCTCAGTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | AAACTGAGCCTACTGAGGAGATGCGGCGACGGCGACAGTTTCCCGGGGCTGCTCTTGAAGCCGGCCAGGTaGTCCGACATCTCAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: KLSLLRRCGDGDSFPGLLLKPAR*SDISAW Trigger: CCAGGCTGAGATGTCGGAGCACCTGGCCGGCTTCAA...GAGCAGCCCCGGGAAACTGTCGCCGTCGCCGCATCTCCTCAGTAGGCTCAGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | AAACTGAGCCTACTGAGGAGATGCGGCGACGGCGACAGTTTCCCGGGGCTGCTCGCTTCTTCATGTAGCTaGCGGTGCGGCAGCGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: KLSLLRRCGDGDSFPGLLASSCS*RCGSAA Trigger: TGCTGCGCTGCCGCACCGCCAGCTACATGAAGAAGC...GAGCAGCCCCGGGAAACTGTCGCCGTCGCCGCATCTCCTCAGTAGGCTCAGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | AAACTGAGCCTACTGAGGAGATGCGGCGACGGCGACAGTTTCCCGGGGCTGCTCCCTGGATCACCTCGATaGGGGTCTTCAGGACGTGCG | + |
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Preference number: 4 (lower is better) Translates to: KLSLLRRCGDGDSFPGLLPGSPR*GSSGRA Trigger: CGCACGTCCTGAAGACCCCCATCGAGGTGATCCAGG...GAGCAGCCCCGGGAAACTGTCGCCGTCGCCGCATCTCCTCAGTAGGCTCAGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | GCAGTAGTACGATCCCGGCCCACTGCAGCCTCCGCCTCCCGGGTTCAGTTGATTACGCTGAACACCAGCTaGTCTTGGATGGCGCGGTAC | + |
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Preference number: 4 (lower is better) Translates to: AVVRSRPTAASASRVQLITLNTS*SWMARY Trigger: GTACCGCGCCATCCAAGACCAGCTGGTGTTCAGCGT...AATCAACTGAACCCGGGAGGCGGAGGCTGCAGTGGGCCGGGATCGTACTACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | AAACTGAGCCTACTGAGGAGATGCGGCGACGGCGACAGTTTCCCGGGGCTGCTCCACTGTCTTCCACGCTaGAGTGCAAAGGCACGATCT | + |
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Preference number: 4 (lower is better) Translates to: KLSLLRRCGDGDSFPGLLHCLPR*SAKARS Trigger: AGATCGTGCCTTTGCACTCCAGCGTGGAAGACAGTG...GAGCAGCCCCGGGAAACTGTCGCCGTCGCCGCATCTCCTCAGTAGGCTCAGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR TCA 90 bp | ACGCAACATGACCAAATCTTAGTTGGTGAGGGAGGTAAAAGACCCTTAAGGGCACCTCCTCCTCGCGCTTaGAGCCGGCCAGGTGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: TQHDQILVGEGGKRPLRAPPPRA*SRPGAP Trigger: CGGAGCACCTGGCCGGCTTCAAGCGCGAGGAGGAGG...TGCCCTTAAGGGTCTTTTACCTCCCTCACCAACTAAGATTTGGTCATGTTGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR TCA 90 bp | TGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATATTTCCGGGGAATTTCCCGTACTCCTCCCCGATaGTCAAGGTGGGCGAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: CPSGGAMQRFPSYFRGISRTPPR*SRWASR Trigger: CCGACTCGCCCACCTTGATCATCGGGGAGGAGTACG...GGAAATTCCCCGGAAATATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | AAACTGAGCCTACTGAGGAGATGCGGCGACGGCGACAGTTTCCCGGGGCTGCTCTTTCCAGATTCATCTTaGCCAGGTCTTCGACGACAG | + |
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Preference number: 4 (lower is better) Translates to: KLSLLRRCGDGDSFPGLLFPDSS*PGLRRQ Trigger: CTGTCGTCGAAGACCTGGCCAAGATGAATCTGGAAA...GAGCAGCCCCGGGAAACTGTCGCCGTCGCCGCATCTCCTCAGTAGGCTCAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | AAACTGAGCCTACTGAGGAGATGCGGCGACGGCGACAGTTTCCCGGGGCTGCTCTTTATGCCCCTCTGGTaGTGCAATGCAGAGATTTCC | + |
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Preference number: 4 (lower is better) Translates to: KLSLLRRCGDGDSFPGLLFMPLW*CNAEIS Trigger: GGAAATCTCTGCATTGCACCACCAGAGGGGCATAAA...GAGCAGCCCCGGGAAACTGTCGCCGTCGCCGCATCTCCTCAGTAGGCTCAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | TGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATATTTCCGGGGAATTTCCTGGAAGATGCTCTCCTaGCGCTCCCTCTCCTCGGAC | + |
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Preference number: 4 (lower is better) Translates to: CPSGGAMQRFPSYFRGISWKMLS*RSLSSD Trigger: GTCCGAGGAGAGGGAGCGCCAGGAGAGCATCTTCCA...GGAAATTCCCCGGAAATATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | ACGCAACATGACCAAATCTTAGTTGGTGAGGGAGGTAAAAGACCCTTAAGGGCAGCGCGGTACATGCAGTaGCCGTCGGCCGGGATCGCT | + |
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Preference number: 4 (lower is better) Translates to: TQHDQILVGEGGKRPLRAARYMQ*PSAGIA Trigger: AGCGATCCCGGCCGACGGCCACTGCATGTACCGCGC...TGCCCTTAAGGGTCTTTTACCTCCCTCACCAACTAAGATTTGGTCATGTTGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | TTCCCTCATATTTCCGGGGAATTTCCCTCGAATTTCGTTTCCCACCCTGTGAAAGGCTGCTCAGCGCCTTaGGGCCTACAGGAGACGCGG | + |
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Preference number: 4 (lower is better) Translates to: FPHISGEFPSNFVSHPVKGCSAP*GLQETR Trigger: CCGCGTCTCCTGTAGGCCCCAAGGCGCTGAGCAGCC...TTTCACAGGGTGGGAAACGAAATTCGAGGGAAATTCCCCGGAAATATGAGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | GAGATTTCCCTCATATTTCCGGGGAATTTCCCTCGAATTTCGTTTCCCACCCTGCAGCTGGCCTCCCCATaGCGTGGTGCGCACGATGTT | + |
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Preference number: 4 (lower is better) Translates to: EISLIFPGNFPRISFPTLQLASP*RGAHDV Trigger: AACATCGTGCGCACCACGGCATGGGGAGGCCAGCTG...CAGGGTGGGAAACGAAATTCGAGGGAAATTCCCCGGAAATATGAGGGAAATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | GAAGAGGTTAGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTTGGGCCTGCAGCTCCTaGCTCTCGCGTTGGTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: EEVRTFKFMPLWWCNAEIWACSS*LSRWWR Trigger: CCGCCACCAACGCGAGAGGCAGGAGCTGCAGGCCCA...AATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | GAAGAGGTTAGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTGGATGGCGCGGTACATaGAGTGGCCGTCGGCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: EEVRTFKFMPLWWCNAEIGWRGT*SGRRPG Trigger: TCCCGGCCGACGGCCACTGCATGTACCGCGCCATCC...AATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | TATGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATATTTCCGGGGAATTTTCATGTAGCTGGCGGTaGGGCAGCGCAGCATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: YAPLVVQCRDFPHISGEFSCSWR*GSAASP Trigger: TGGAGATGCTGCGCTGCCGCACCGCCAGCTACATGA...AAATTCCCCGGAAATATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR TCA 90 bp | AAACTGAGCCTACTGAGGAGATGCGGCGACGGCGACAGTTTCCCGGGGCTGCTCTTTCCATTTTTGTGGTaGAGTTATACGCAACATGAC | + |
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Preference number: 4 (lower is better) Translates to: KLSLLRRCGDGDSFPGLLFPFLW*SYTQHD Trigger: GTCATGTTGCGTATAACTTCACCACAAAAATGGAAA...GAGCAGCCCCGGGAAACTGTCGCCGTCGCCGCATCTCCTCAGTAGGCTCAGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | AAGAAGAGGTTAGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGACTCCGGATCTGGGCCTaGAGCTCCTGCCTCTCGCGT | + |
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Preference number: 4 (lower is better) Translates to: KKRLELSNLCPSGGAMQRLRIWA*SSCLSR Trigger: ACGCGAGAGGCAGGAGCTGCAGGCCCAGATCCGGAG...TCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTCTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | GAAGAGGTTAGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTGGGGTCTTCAGGACGTaGGACAGGGCCCTCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: EEVRTFKFMPLWWCNAEIGVFRT*DRALSS Trigger: GGAGCTGAGGGCCCTGTCGCACGTCCTGAAGACCCC...AATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | GAGATTTCCCTCATATTTCCGGGGAATTTCCCTCGAATTTCGTTTCCCACCCTGAGCCTACTGAGGAGATaGGGCGACGGCGACAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: EISLIFPGNFPRISFPTLSLLRR*GDGDSF Trigger: GAAACTGTCGCCGTCGCCGCATCTCCTCAGTAGGCT...CAGGGTGGGAAACGAAATTCGAGGGAAATTCCCCGGAAATATGAGGGAAATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | GAAGAGGTTAGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTCCCTGGCTCCCAGGATaGCGGCGAGCTTCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: EEVRTFKFMPLWWCNAEIPWLPG*RRASPP Trigger: AGGAGGAGAAGCTCGCCGCCATCCTGGGAGCCAGGG...AATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | CTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATATTTCGTGGGCGAGTCGGCCTaGATCACCTCGATGGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LSNLCPSGGAMQRFPSYFVGESA*ITSMGV Trigger: GACCCCCATCGAGGTGATCCAGGCCGACTCGCCCAC...GAAATATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | CTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATATTTCCCATCTCGGCCTCCATaGGGGCCACGTCTTGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LSNLCPSGGAMQRFPSYFPSRPP*GPRLGA Trigger: TGCTCCAAGACGTGGCCCGCATGGAGGCCGAGATGG...GAAATATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | TTCCCTCATATTTCCGGGGAATTTCCCTCGAATTTCGTTTCCCACCCTGTGAAATCCGACATCTCAGCCTaGAAGATGCTCTCCTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: FPHISGEFPSNFVSHPVKSDISA*KMLSWR Trigger: GCGCCAGGAGAGCATCTTCCAGGCTGAGATGTCGGA...TTTCACAGGGTGGGAAACGAAATTCGAGGGAAATTCCCCGGAAATATGAGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR TCA 90 bp | TTCCCTCATATTTCCGGGGAATTTCCCTCGAATTTCGTTTCCCACCCTGTGAAATCTCCACAGACACGCTaGACACCAGCTGGTCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: FPHISGEFPSNFVSHPVKSPQTR*TPAGLG Trigger: TCCAAGACCAGCTGGTGTTCAGCGTGTCTGTGGAGA...TTTCACAGGGTGGGAAACGAAATTCGAGGGAAATTCCCCGGAAATATGAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR TCA 90 bp | TATGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATATTTCCGGGGAATTTTGTCGCAGTAGATCATaGAGTCGTCGTAGCCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: YAPLVVQCRDFPHISGEFCRSRS*SRRSRR Trigger: CCTTCGGCTACGACGACTTCATGATCTACTGCGACA...AAATTCCCCGGAAATATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR TCA 90 bp | CTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATATTTCCCTCCCGGGTTCAGTTaGTTCTCCTGCCTCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: LSNLCPSGGAMQRFPSYFPPGFS*FSCLST Trigger: GGTGCTGAGGCAGGAGAATCAACTGAACCCGGGAGG...GAAATATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | AGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATAGGTGGCGGCGCAGTATaGGCTGCTGTTCACTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: RTFKFMPLWWCNAEISLIGGGAV*AAVHSS Trigger: CGAAGAGTGAACAGCAGCGCATACTGCGCCGCCACC...TATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | GAAGAGGTTAGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTCCAGCTGGTCTTGGATaGCGCGGTACATGCAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: EEVRTFKFMPLWWCNAEIPAGLG*RGTCSG Trigger: GCCACTGCATGTACCGCGCCATCCAAGACCAGCTGG...AATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | CTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATATTTCTCTCAGCCTGGAAGATaGTCTCCTGGCGCTCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LSNLCPSGGAMQRFPSYFSQPGR*SPGAPS Trigger: AGAGGGAGCGCCAGGAGAGCATCTTCCAGGCTGAGA...GAAATATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | ACGCAACATGACCAAATCTTAGTTGGTGAGGGAGGTAAAAGACCCTTAAGGGCAATGCCCCTCTGGTGGTaGAATGCAGAGATTTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: TQHDQILVGEGGKRPLRAMPLWW*NAEISL Trigger: GAGGGAAATCTCTGCATTGCACCACCAGAGGGGCAT...TGCCCTTAAGGGTCTTTTACCTCCCTCACCAACTAAGATTTGGTCATGTTGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | TATGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATATTTCCGGGGAATTTTCTCGCTGTCTTCCATaGTGGAGTGCAGTAGTACGA | + |
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Preference number: 4 (lower is better) Translates to: YAPLVVQCRDFPHISGEFSRCLP*WSAVVR Trigger: TCGTACTACTGCACTCCAGCATGGAAGACAGCGAGA...AAATTCCCCGGAAATATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | GAAGAGGTTAGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTTTTAAGCTCCGGATCTaGGCCTGCAGCTCCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: EEVRTFKFMPLWWCNAEIFKLRI*ACSSCL Trigger: GAGGCAGGAGCTGCAGGCCCAGATCCGGAGCTTAAA...AATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | TTCCCTCATATTTCCGGGGAATTTCCCTCGAATTTCGTTTCCCACCCTGTGAAACGCTGTCTTCCATGCTaGAGTGCAGTAGTACGATCC | + |
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Preference number: 4 (lower is better) Translates to: FPHISGEFPSNFVSHPVKRCLPC*SAVVRS Trigger: GGATCGTACTACTGCACTCCAGCATGGAAGACAGCG...TTTCACAGGGTGGGAAACGAAATTCGAGGGAAATTCCCCGGAAATATGAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | AGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATACGGCGCAGTATGCGCTaGTGTTCACTCTTCGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: RTFKFMPLWWCNAEISLIRRSMR*CSLFGS Trigger: TGATCCGAAGAGTGAACAGCAGCGCATACTGCGCCG...TATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | AAGAAGAGGTTAGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGAAACACCAGCTGGTCTTaGATGGCGCGGTACATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KKRLELSNLCPSGGAMQRNTSWS*MARYMQ Trigger: CTGCATGTACCGCGCCATCCAAGACCAGCTGGTGTT...TCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | AAGAAGAGGTTAGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGACTTTCTCTCTTTCTGTaGGCTTTGGAGGAGCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KKRLELSNLCPSGGAMQRLSLFL*ALEERG Trigger: TCCCCGCTCCTCCAAAGCCCACAGAAAGAGAGAAAG...TCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTCTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | AAGAAGAGGTTAGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGAAGGCCCCCGCCAACCTaGCTGGCTAATTTTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KKRLELSNLCPSGGAMQRRPPPT*LANFSF Trigger: AAATGAAAAATTAGCCAGGCAGGTTGGCGGGGGCCT...TCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTCTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | AGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATAATGCGGGCCACGTCTTaGAGCAACTGCTTTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTFKFMPLWWCNAEISLIMRATS*SNCFLF Trigger: GAAAAGAAAGCAGTTGCTCCAAGACGTGGCCCGCAT...TATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | AAGAAGAGGTTAGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGAATGCTACTGTCGTCTTaGAACTTCTCCAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KKRLELSNLCPSGGAMQRMLLSS*NFSSSC Trigger: GCAGGAGCTGGAGAAGTTCCAAGACGACAGTAGCAT...TCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CCA 90 bp | TATGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATATTTCCGGGGAATTTAAATTTATGCCCCTCTaGTGGTGCAATGCAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: YAPLVVQCRDFPHISGEFKFMPL*WCNAEI Trigger: AATCTCTGCATTGCACCACCAGAGGGGCATAAATTT...AAATTCCCCGGAAATATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR TCA 90 bp | CTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATATTTCATGGCAAGCGGGAGTTaGAATTTGCTGGCAGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSNLCPSGGAMQRFPSYFMASGS*NLLAVQ Trigger: TTGAACTGCCAGCAAATTTCAACTCCCGCTTGCCAT...GAAATATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | AGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATAGCGGGAGTTGAAATTTaGTGGCAGTTCAAGTACCGA | + |
|
Preference number: 4 (lower is better) Translates to: RTFKFMPLWWCNAEISLIAGVEI*WQFKYR Trigger: TCGGTACTTGAACTGCCAGCAAATTTCAACTCCCGC...TATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | TTCCCTCATATTTCCGGGGAATTTCCCTCGAATTTCGTTTCCCACCCTGTGAAAGAACTTTCAAATTTATaGCCCTCTGGTGGTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: FPHISGEFPSNFVSHPVKELSNL*PSGGAM Trigger: CATTGCACCACCAGAGGGGCATAAATTTGAAAGTTC...TTTCACAGGGTGGGAAACGAAATTCGAGGGAAATTCCCCGGAAATATGAGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | AGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATAACGTCTTGGAGCAACTaGTTTCTTTTCGTCTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RTFKFMPLWWCNAEISLITSWSN*FLFVLS Trigger: CGACAAGACGAAAAGAAAGCAGTTGCTCCAAGACGT...TATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | GAAGAGGTTAGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTCGACGACAGATTCAATaGTACTGTCGTCTTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: EEVRTFKFMPLWWCNAEIRRQIQ*YCRLGT Trigger: AGTTCCAAGACGACAGTAGCATTGAATCTGTCGTCG...AATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR GCA 90 bp | AAGAAGAGGTTAGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGACCTCTGGTGGTGCAATaGAGAGATTTCCCTCATATT | + |
|
Preference number: 4 (lower is better) Translates to: KKRLELSNLCPSGGAMQRPLVVQ*RDFPHI Trigger: AATATGAGGGAAATCTCTGCATTGCACCACCAGAGG...TCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTCTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CAA 90 bp | CTGAGGAGATGCGGCGACGGCGACAGTTTCCCGGGGCTGCTCAGCGCCTTGGGGGGGCTGCTCAGCGCCTaGGGGCCTACAGGAGACGCG | + |
|
Preference number: 5 (lower is better) Translates to: LRRCGDGDSFPGLLSALGGLLSA*GPTGDA Trigger: CGCGTCTCCTGTAGGCCCCAAGGCGCTGAGCAGCCC...CCCCAAGGCGCTGAGCAGCCCCGGGAAACTGTCGCCGTCGCCGCATCTCCTCAG 71% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CCA 90 bp | GCGGTGCGGCAGCGCAGCATCTCCACAGACACGCTGAACACCAGCTaGTCTTGGATGGCGCGGTACATGCAGTGGCCGTCGGCCGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: AVRQRSISTDTLNTS*SWMARYMQWPSAGI Trigger: GATCCCGGCCGACGGCCACTGCATGTACCGCGCCATCCAAGACCAGCTGGTGTTCAGCGTGTCTGTGGAGATGCTGCGCTGCCGCACCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS TCA 90 bp | CCCTGGCTCCCAGGATGGCGGCGAGCTTCTCCTCCTCCTCGCGCTTaGAGCCGGCCAGGTGCTCCGACATCTCAGCCTGGAAGATGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PWLPGWRRASPPPRA*SRPGAPTSQPGRCS Trigger: AGAGCATCTTCCAGGCTGAGATGTCGGAGCACCTGGCCGGCTTCAAGCGCGAGGAGGAGGAGAAGCTCGCCGCCATCCTGGGAGCCAGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS GCA 90 bp | ATGGCGGCGAGCTTCTCCTCCTCCTCGCGCTTGAAGCCGGCCAGGTaGTCCGACATCTCAGCCTGGAAGATGCTCTCCTGGCGCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: MAASFSSSSRLKPAR*SDISAWKMLSWRSL Trigger: GAGGGAGCGCCAGGAGAGCATCTTCCAGGCTGAGATGTCGGAGCACCTGGCCGGCTTCAAGCGCGAGGAGGAGGAGAAGCTCGCCGCCAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CAA 90 bp | CTGAGGAGATGCGGCGACGGCGACAGTTTCCCGGGGCTGCTCAGCGCCTTGGGGGAACACCAGCTGGTCTaGGATGGCGCGGTACATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LRRCGDGDSFPGLLSALGEHQLV*DGAVHA Trigger: TGCATGTACCGCGCCATCCAAGACCAGCTGGTGTTC...CCCCAAGGCGCTGAGCAGCCCCGGGAAACTGTCGCCGTCGCCGCATCTCCTCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CCA 90 bp | GACACGCTGAACACCAGCTGGTCTTGGATGGCGCGGTACATGCAGTaGCCGTCGGCCGGGATCGCTTTCATCTCCAGACCCCTGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: DTLNTSWSWMARYMQ*PSAGIAFISRPLAP Trigger: GGGAGCCAGGGGTCTGGAGATGAAAGCGATCCCGGCCGACGGCCACTGCATGTACCGCGCCATCCAAGACCAGCTGGTGTTCAGCGTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CCA 90 bp | CGGCAGCGCAGCATCTCCACAGACACGCTGAACACCAGCTGGTCTTaGATGGCGCGGTACATGCAGTGGCCGTCGGCCGGGATCGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RQRSISTDTLNTSWS*MARYMQWPSAGIAF Trigger: GAAAGCGATCCCGGCCGACGGCCACTGCATGTACCGCGCCATCCAAGACCAGCTGGTGTTCAGCGTGTCTGTGGAGATGCTGCGCTGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS TCA 90 bp | TCATGTAGCTGGCGGTGCGGCAGCGCAGCATCTCCACAGACACGCTaGACACCAGCTGGTCTTGGATGGCGCGGTACATGCAGTGGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SCSWRCGSAASPQTR*TPAGLGWRGTCSGR Trigger: ACGGCCACTGCATGTACCGCGCCATCCAAGACCAGCTGGTGTTCAGCGTGTCTGTGGAGATGCTGCGCTGCCGCACCGCCAGCTACATGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS GCA 90 bp | CTTCAGGACGTGCGACAGGGCCCTCAGCTCCAGCTGGCCTCCCCATaGCGTGGTGCGCACGATGTTGTCGCAGTAGATCATGAAGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LQDVRQGPQLQLASP*RGAHDVVAVDHEVV Trigger: GACGACTTCATGATCTACTGCGACAACATCGTGCGCACCACGGCATGGGGAGGCCAGCTGGAGCTGAGGGCCCTGTCGCACGTCCTGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CCA 90 bp | TCCTCCTCGCGCTTGAAGCCGGCCAGGTGCTCCGACATCTCAGCCTaGAAGATGCTCTCCTGGCGCTCCCTCTCCTCGGACTCCATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSSRLKPARCSDISA*KMLSWRSLSSDSIL Trigger: AAGAATGGAGTCCGAGGAGAGGGAGCGCCAGGAGAGCATCTTCCAGGCTGAGATGTCGGAGCACCTGGCCGGCTTCAAGCGCGAGGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CCA 90 bp | TTCTTGACGTACTCCTCCCCGATGATCAAGGTGGGCGAGTCGGCCTaGATCACCTCGATGGGGGTCTTCAGGACGTGCGACAGGGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FLTYSSPMIKVGESA*ITSMGVFRTCDRAL Trigger: GAGGGCCCTGTCGCACGTCCTGAAGACCCCCATCGAGGTGATCCAGGCCGACTCGCCCACCTTGATCATCGGGGAGGAGTACGTCAAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CAA 90 bp | GCAGTAGTACGATCCCGGCCCACTGCAGCCTCCGCCTCCCGGGTTCAGTTGATTGCCTCCCGGGTTCAGTaGATTCTCCTGCCTCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AVVRSRPTAASASRVQLIASRVQ*ILLPQH Trigger: GTGCTGAGGCAGGAGAATCAACTGAACCCGGGAGGC...AATCAACTGAACCCGGGAGGCGGAGGCTGCAGTGGGCCGGGATCGTACTACTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS TCA 90 bp | ATGCTACTGTCGTCTTGGAACTTCTCCAGCTCCTGCCGGTGCTTCTaGGCCATCTCGGCCTCCATGCGGGCCACGTCTTGGAGCAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: MLLSSWNFSSSCRCF*AISASMRATSWSNC Trigger: GCAGTTGCTCCAAGACGTGGCCCGCATGGAGGCCGAGATGGCTCAGAAGCACCGGCAGGAGCTGGAGAAGTTCCAAGACGACAGTAGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS GCA 90 bp | GCCTGCAGCTCCTGCCTCTCGCGTTGGTGGCGGCGCAGTATGCGCTaGTGTTCACTCTTCGGATCATCCATGATGTTGAATGGCAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ACSSCLSRWWRRSMR*CSLFGSSMMLNGKR Trigger: CCGCTTGCCATTCAACATCATGGATGATCCGAAGAGTGAACAGCAGCGCATACTGCGCCGCCACCAACGCGAGAGGCAGGAGCTGCAGGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CCA 90 bp | TTTAAGCTCCGGATCTGGGCCTGCAGCTCCTGCCTCTCGCGTTGGTaGCGGCGCAGTATGCGCTGCTGTTCACTCTTCGGATCATCCATG | + |
|
Preference number: 5 (lower is better) Translates to: FKLRIWACSSCLSRW*RRSMRCCSLFGSSM Trigger: CATGGATGATCCGAAGAGTGAACAGCAGCGCATACTGCGCCGCCACCAACGCGAGAGGCAGGAGCTGCAGGCCCAGATCCGGAGCTTAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CCA 90 bp | AAGCCGGCCAGGTGCTCCGACATCTCAGCCTGGAAGATGCTCTCCTaGCGCTCCCTCTCCTCGGACTCCATTCTTTCTCTCTTTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KPARCSDISAWKMLS*RSLSSDSILSLFLW Trigger: CCACAGAAAGAGAGAAAGAATGGAGTCCGAGGAGAGGGAGCGCCAGGAGAGCATCTTCCAGGCTGAGATGTCGGAGCACCTGGCCGGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CCA 90 bp | TGTGGGCTTTGGAGGAGCGGGGAGGCCGGTTTTCCAGATTCATCTTaGCCAGGTCTTCGACGACAGATTCAATGCTACTGTCGTCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: CGLWRSGEAGFPDSS*PGLRRQIQCYCRLG Trigger: TCCAAGACGACAGTAGCATTGAATCTGTCGTCGAAGACCTGGCCAAGATGAATCTGGAAAACCGGCCTCCCCGCTCCTCCAAAGCCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CAA 90 bp | AAGAAGAGGTTAGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGACTCCTGCCTCTCGCGTaGGTGGCGGCGCAGTATGCG | + |
|
Preference number: 5 (lower is better) Translates to: KKRLELSNLCPSGGAMQRLLPLA*VAAQYA Trigger: CGCATACTGCGCCGCCACCAACGCGAGAGGCAGGAG...TCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTCTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CAA 90 bp | GAAGAGGTTAGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTTCCTCCTCCTCGCGCTaGAAGCCGGCCAGGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EEVRTFKFMPLWWCNAEISSSSR*KPARCS Trigger: GGAGCACCTGGCCGGCTTCAAGCGCGAGGAGGAGGA...AATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CAA 90 bp | TATGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATATTTCCGGGGAATTTTCGCTGGTCTCGGGGTaGCTGAAGAAGGGCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: YAPLVVQCRDFPHISGEFSLVSG*LKKGRN Trigger: GTTCCTGCCCTTCTTCAGCAACCCCGAGACCAGCGA...AAATTCCCCGGAAATATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CAA 90 bp | CTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATATTTCCTCTTTCTGTGGGCTTaGGAGGAGCGGGGAGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSNLCPSGGAMQRFPSYFLFLWA*EERGGR Trigger: CCGGCCTCCCCGCTCCTCCAAAGCCCACAGAAAGAG...GAAATATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS GCA 90 bp | GGTTTTCCAGATTCATCTTGGCCAGGTCTTCGACGACAGATTCAATaGTACTGTCGTCTTGGAACTTCTCCAGCTCCTGCCGGTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GFPDSSWPGLRRQIQ*YCRLGTSPAPAGAS Trigger: AGAAGCACCGGCAGGAGCTGGAGAAGTTCCAAGACGACAGTAGCATTGAATCTGTCGTCGAAGACCTGGCCAAGATGAATCTGGAAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CAA 90 bp | TGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATATTTCCGGGGAATTTCCTTTTCCAGATTCATCTaGGCCAGGTCTTCGACGACA | + |
|
Preference number: 5 (lower is better) Translates to: CPSGGAMQRFPSYFRGISFSRFI*ARSSTT Trigger: TGTCGTCGAAGACCTGGCCAAGATGAATCTGGAAAA...GGAAATTCCCCGGAAATATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CCA 90 bp | CAGTATGCGCTGCTGTTCACTCTTCGGATCATCCATGATGTTGAATaGCAAGCGGGAGTTGAAATTTGCTGGCAGTTCAAGTACCGAACA | + |
|
Preference number: 5 (lower is better) Translates to: QYALLFTLRIIHDVE*QAGVEICWQFKYRT Trigger: TGTTCGGTACTTGAACTGCCAGCAAATTTCAACTCCCGCTTGCCATTCAACATCATGGATGATCCGAAGAGTGAACAGCAGCGCATACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CAA 90 bp | GAAGAGGTTAGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTAGGATGATCGGCTTCTaGACGTACTCCTCCCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: EEVRTFKFMPLWWCNAEIRMIGF*TYSSPM Trigger: CATCGGGGAGGAGTACGTCAAGAAGCCGATCATCCT...AATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CAA 90 bp | TTCCCTCATATTTCCGGGGAATTTCCCTCGAATTTCGTTTCCCACCCTGTGAAAAATGGCAAGCGGGAGTaGAAATTTGCTGGCAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FPHISGEFPSNFVSHPVKNGKRE*KFAGSS Trigger: TGAACTGCCAGCAAATTTCAACTCCCGCTTGCCATT...TTTCACAGGGTGGGAAACGAAATTCGAGGGAAATTCCCCGGAAATATGAGGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CAA 90 bp | GAAGAGGTTAGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTTGCTTTCTTTTCGTCTaGTCGGTCTTGGGGACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: EEVRTFKFMPLWWCNAEICFLFV*SVLGTE Trigger: CTCGGTCCCCAAGACCGACAAGACGAAAAGAAAGCA...AATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCTAACCTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CAA 90 bp | AGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATACATGCGGGCCACGTCTaGGAGCAACTGCTTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RTFKFMPLWWCNAEISLIHAGHV*EQLLSF Trigger: AAAAGAAAGCAGTTGCTCCAAGACGTGGCCCGCATG...TATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS-3UTR CAA 90 bp | AGAACTTTCAAATTTATGCCCCTCTGGTGGTGCAATGCAGAGATTTCCCTCATAGGATCATCCATGATGTaGAATGGCAAGCGGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RTFKFMPLWWCNAEISLIGSSMM*NGKREL Trigger: CAACTCCCGCTTGCCATTCAACATCATGGATGATCC...TATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATAAATTTGAAAGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CAA 72 bp | CCCAGGATGGCGGCGAGCTTCTCCTCCTCCTCGCGCTaGAAGCCGGCCAGGTGCTCCGACATCTCAGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRMAASFSSSSR*KPARCSDISAW Trigger: CCAGGCTGAGATGTCGGAGCACCTGGCCGGCTTCAAGCGCGAGGAGGAGGAGAAGCTCGCCGCCATCCTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CAA 90 bp | CCCCTGGCTCCCAGGATGGCGGCGAGCTTCTCCTCCTCCTCGCGCTaGAAGCCGGCCAGGTGCTCCGACATCTCAGCCTGGAAGATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PLAPRMAASFSSSSR*KPARCSDISAWKML Trigger: GAGCATCTTCCAGGCTGAGATGTCGGAGCACCTGGCCGGCTTCAAGCGCGAGGAGGAGGAGAAGCTCGCCGCCATCCTGGGAGCCAGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS TCA 72 bp | CCAGGATGGCGGCGAGCTTCTCCTCCTCCTCGCGCTTaGAGCCGGCCAGGTGCTCCGACATCTCAGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PGWRRASPPPRA*SRPGAPTSQPG Trigger: TCCAGGCTGAGATGTCGGAGCACCTGGCCGGCTTCAAGCGCGAGGAGGAGGAGAAGCTCGCCGCCATCCTGG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CCA 72 bp | CGCTTGAAGCCGGCCAGGTGCTCCGACATCTCAGCCTaGAAGATGCTCTCCTGGCGCTCCCTCTCCTCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RLKPARCSDISA*KMLSWRSLSSD Trigger: GTCCGAGGAGAGGGAGCGCCAGGAGAGCATCTTCCAGGCTGAGATGTCGGAGCACCTGGCCGGCTTCAAGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CAA 90 bp | GCGGCAGCGCAGCATCTCCACAGACACGCTGAACACCAGCTGGTCTaGGATGGCGCGGTACATGCAGTGGCCGTCGGCCGGGATCGCTTT | + |
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Preference number: 6 (lower is better) Translates to: AAAQHLHRHAEHQLV*DGAVHAVAVGRDRF Trigger: AAAGCGATCCCGGCCGACGGCCACTGCATGTACCGCGCCATCCAAGACCAGCTGGTGTTCAGCGTGTCTGTGGAGATGCTGCGCTGCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS TCA 72 bp | TGGCGGTGCGGCAGCGCAGCATCTCCACAGACACGCTaGACACCAGCTGGTCTTGGATGGCGCGGTACATGC | + |
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Preference number: 6 (lower is better) Translates to: WRCGSAASPQTR*TPAGLGWRGTC Trigger: GCATGTACCGCGCCATCCAAGACCAGCTGGTGTTCAGCGTGTCTGTGGAGATGCTGCGCTGCCGCACCGCCA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS GCA 72 bp | GTGCGACAGGGCCCTCAGCTCCAGCTGGCCTCCCCATaGCGTGGTGCGCACGATGTTGTCGCAGTAGATCAT | + |
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Preference number: 6 (lower is better) Translates to: VRQGPQLQLASP*RGAHDVVAVDH Trigger: ATGATCTACTGCGACAACATCGTGCGCACCACGGCATGGGGAGGCCAGCTGGAGCTGAGGGCCCTGTCGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CCA 72 bp | AGCATCTCCACAGACACGCTGAACACCAGCTGGTCTTaGATGGCGCGGTACATGCAGTGGCCGTCGGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: SISTDTLNTSWS*MARYMQWPSAG Trigger: CCCGGCCGACGGCCACTGCATGTACCGCGCCATCCAAGACCAGCTGGTGTTCAGCGTGTCTGTGGAGATGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CAA 72 bp | CAGCATCTCCACAGACACGCTGAACACCAGCTGGTCTaGGATGGCGCGGTACATGCAGTGGCCGTCGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: QHLHRHAEHQLV*DGAVHAVAVGR Trigger: CCGGCCGACGGCCACTGCATGTACCGCGCCATCCAAGACCAGCTGGTGTTCAGCGTGTCTGTGGAGATGCTG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS TCA 72 bp | TCGTCTTGGAACTTCTCCAGCTCCTGCCGGTGCTTCTaGGCCATCTCGGCCTCCATGCGGGCCACGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SSWNFSSSCRCF*AISASMRATSW Trigger: CCAAGACGTGGCCCGCATGGAGGCCGAGATGGCTCAGAAGCACCGGCAGGAGCTGGAGAAGTTCCAAGACGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CCA 72 bp | AACACCAGCTGGTCTTGGATGGCGCGGTACATGCAGTaGCCGTCGGCCGGGATCGCTTTCATCTCCAGACCC | + |
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Preference number: 6 (lower is better) Translates to: NTSWSWMARYMQ*PSAGIAFISRP Trigger: GGGTCTGGAGATGAAAGCGATCCCGGCCGACGGCCACTGCATGTACCGCGCCATCCAAGACCAGCTGGTGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CCA 72 bp | CAGCGCAGCATCTCCACAGACACGCTGAACACCAGCTaGTCTTGGATGGCGCGGTACATGCAGTGGCCGTCG | + |
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Preference number: 6 (lower is better) Translates to: QRSISTDTLNTS*SWMARYMQWPS Trigger: CGACGGCCACTGCATGTACCGCGCCATCCAAGACCAGCTGGTGTTCAGCGTGTCTGTGGAGATGCTGCGCTG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CCA 72 bp | AGGGCAGGAACTCGTCGACGTGCTTCTTCATGTAGCTaGCGGTGCGGCAGCGCAGCATCTCCACAGACACGC | + |
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Preference number: 6 (lower is better) Translates to: RAGTRRRASSCS*RCGSAASPQTR Trigger: GCGTGTCTGTGGAGATGCTGCGCTGCCGCACCGCCAGCTACATGAAGAAGCACGTCGACGAGTTCCTGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CCA 72 bp | TACTCCTCCCCGATGATCAAGGTGGGCGAGTCGGCCTaGATCACCTCGATGGGGGTCTTCAGGACGTGCGAC | + |
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Preference number: 6 (lower is better) Translates to: YSSPMIKVGESA*ITSMGVFRTCD Trigger: GTCGCACGTCCTGAAGACCCCCATCGAGGTGATCCAGGCCGACTCGCCCACCTTGATCATCGGGGAGGAGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS GCA 72 bp | GCTCCTGCCGGTGCTTCTGAGCCATCTCGGCCTCCATaGGGGCCACGTCTTGGAGCAACTGCTTTCTTTTCG | + |
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Preference number: 6 (lower is better) Translates to: APAGASEPSRPP*GPRLGATAFFS Trigger: CGAAAAGAAAGCAGTTGCTCCAAGACGTGGCCCGCATGGAGGCCGAGATGGCTCAGAAGCACCGGCAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CAA 90 bp | CTGCCGGTGCTTCTGAGCCATCTCGGCCTCCATGCGGGCCACGTCTaGGAGCAACTGCTTTCTTTTCGTCTTGTCGGTCTTGGGGACCGA | + |
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Preference number: 6 (lower is better) Translates to: LPVLLSHLGLHAGHV*EQLLSFRLVGLGDR Trigger: TCGGTCCCCAAGACCGACAAGACGAAAAGAAAGCAGTTGCTCCAAGACGTGGCCCGCATGGAGGCCGAGATGGCTCAGAAGCACCGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS TCA 72 bp | CGTCGTAGCCGAAGGAGTCGCTGGTCTCGGGGTTGCTaGAGAAGGGCAGGAACTCGTCGACGTGCTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RRSRRSRWSRGC*RRAGTRRRASS Trigger: TGAAGAAGCACGTCGACGAGTTCCTGCCCTTCTTCAGCAACCCCGAGACCAGCGACTCCTTCGGCTACGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CAA 90 bp | CGCTCCCTCTCCTCGGACTCCATTCTTTCTCTCTTTCTGTGGGCTTaGGAGGAGCGGGGAGGCCGGTTTTCCAGATTCATCTTGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: RSLSSDSILSLFLWA*EERGGRFSRFILAR Trigger: CCTGGCCAAGATGAATCTGGAAAACCGGCCTCCCCGCTCCTCCAAAGCCCACAGAAAGAGAGAAAGAATGGAGTCCGAGGAGAGGGAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS TCA 72 bp | ATGCCGTGGTGCGCACGATGTTGTCGCAGTAGATCATaGAGTCGTCGTAGCCGAAGGAGTCGCTGGTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: MPWCARCCRSRS*SRRSRRSRWSR Trigger: CCGAGACCAGCGACTCCTTCGGCTACGACGACTTCATGATCTACTGCGACAACATCGTGCGCACCACGGCAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CCA 72 bp | AGGTGCTCCGACATCTCAGCCTGGAAGATGCTCTCCTaGCGCTCCCTCTCCTCGGACTCCATTCTTTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: RCSDISAWKMLS*RSLSSDSILSL Trigger: GAGAGAAAGAATGGAGTCCGAGGAGAGGGAGCGCCAGGAGAGCATCTTCCAGGCTGAGATGTCGGAGCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CAA 90 bp | CTGTGGGCTTTGGAGGAGCGGGGAGGCCGGTTTTCCAGATTCATCTaGGCCAGGTCTTCGACGACAGATTCAATGCTACTGTCGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: LWALEERGGRFSRFI*ARSSTTDSMLLSSW Trigger: CCAAGACGACAGTAGCATTGAATCTGTCGTCGAAGACCTGGCCAAGATGAATCTGGAAAACCGGCCTCCCCGCTCCTCCAAAGCCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS GCA 72 bp | TCCTGCCTCTCGCGTTGGTGGCGGCGCAGTATGCGCTaGTGTTCACTCTTCGGATCATCCATGATGTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: SCLSRWWRRSMR*CSLFGSSMMLN Trigger: ATTCAACATCATGGATGATCCGAAGAGTGAACAGCAGCGCATACTGCGCCGCCACCAACGCGAGAGGCAGGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CAA 72 bp | CTTCTGAGCCATCTCGGCCTCCATGCGGGCCACGTCTaGGAGCAACTGCTTTCTTTTCGTCTTGTCGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LLSHLGLHAGHV*EQLLSFRLVGL Trigger: AAGACCGACAAGACGAAAAGAAAGCAGTTGCTCCAAGACGTGGCCCGCATGGAGGCCGAGATGGCTCAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CCA 72 bp | TGGAGGAGCGGGGAGGCCGGTTTTCCAGATTCATCTTaGCCAGGTCTTCGACGACAGATTCAATGCTACTGT | + |
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Preference number: 6 (lower is better) Translates to: WRSGEAGFPDSS*PGLRRQIQCYC Trigger: ACAGTAGCATTGAATCTGTCGTCGAAGACCTGGCCAAGATGAATCTGGAAAACCGGCCTCCCCGCTCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CAA 72 bp | TTGGAGGAGCGGGGAGGCCGGTTTTCCAGATTCATCTaGGCCAGGTCTTCGACGACAGATTCAATGCTACTG | + |
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Preference number: 6 (lower is better) Translates to: LEERGGRFSRFI*ARSSTTDSMLL Trigger: CAGTAGCATTGAATCTGTCGTCGAAGACCTGGCCAAGATGAATCTGGAAAACCGGCCTCCCCGCTCCTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CAA 90 bp | CGGCGCAGTATGCGCTGCTGTTCACTCTTCGGATCATCCATGATGTaGAATGGCAAGCGGGAGTTGAAATTTGCTGGCAGTTCAAGTACC | + |
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Preference number: 6 (lower is better) Translates to: RRSMRCCSLFGSSMM*NGKRELKFAGSSST Trigger: GGTACTTGAACTGCCAGCAAATTTCAACTCCCGCTTGCCATTCAACATCATGGATGATCCGAAGAGTGAACAGCAGCGCATACTGCGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS GCA 72 bp | GATTCATCTTGGCCAGGTCTTCGACGACAGATTCAATaGTACTGTCGTCTTGGAACTTCTCCAGCTCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: DSSWPGLRRQIQ*YCRLGTSPAPA Trigger: GGCAGGAGCTGGAGAAGTTCCAAGACGACAGTAGCATTGAATCTGTCGTCGAAGACCTGGCCAAGATGAATC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CAA 72 bp | ATGCGCTGCTGTTCACTCTTCGGATCATCCATGATGTaGAATGGCAAGCGGGAGTTGAAATTTGCTGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: MRCCSLFGSSMM*NGKRELKFAGS Trigger: ACTGCCAGCAAATTTCAACTCCCGCTTGCCATTCAACATCATGGATGATCCGAAGAGTGAACAGCAGCGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CAA 90 bp | TGTTCACTCTTCGGATCATCCATGATGTTGAATGGCAAGCGGGAGTaGAAATTTGCTGGCAGTTCAAGTACCGAACAGACCAGAAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: CSLFGSSMMLNGKRE*KFAGSSSTEQTRSP Trigger: AGGACTTCTGGTCTGTTCGGTACTTGAACTGCCAGCAAATTTCAACTCCCGCTTGCCATTCAACATCATGGATGATCCGAAGAGTGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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| CDS CAA 72 bp | TTCGGATCATCCATGATGTTGAATGGCAAGCGGGAGTaGAAATTTGCTGGCAGTTCAAGTACCGAACAGACC | + |
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Preference number: 6 (lower is better) Translates to: FGSSMMLNGKRE*KFAGSSSTEQT Trigger: GGTCTGTTCGGTACTTGAACTGCCAGCAAATTTCAACTCCCGCTTGCCATTCAACATCATGGATGATCCGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338352.3 |
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